locus-tag	class	description
CX042_00005	COG0445	tRNA wobble uridine modification
CX042_00015	COG1192	Involved in chromosome partitioning
CX042_00025	COG1475	DNA binding
CX042_00050	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CX042_00060	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CX042_00070	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CX042_00075	COG0081	regulation of translation
CX042_00080	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CX042_00085	COG0222	ribosome binding
CX042_00090	COG0085	RNA polymerase activity
CX042_00095	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CX042_00135	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_00160	COG1024	Enoyl-CoA hydratase
CX042_00180	COG0752	glycyl-tRNA synthetase alpha subunit
CX042_00185	COG0751	glycine-tRNA ligase activity
CX042_00190	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CX042_00195	COG0204	Acyl-transferase
CX042_00210	COG0242	peptide deformylase activity
CX042_00250	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CX042_00255	COG2813	Specifically methylates the guanine in position
CX042_00255	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CX042_00270	COG2223	nitrite transmembrane transporter activity
CX042_00280	COG1794	racemase activity, acting on amino acids and derivatives
CX042_00285	COG1126	abc transporter atp-binding protein
CX042_00290	COG0765	amino acid transport
CX042_00295	COG0765	amino acid transport
CX042_00300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_00365	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CX042_00395	COG0326	Molecular chaperone. Has ATPase activity
CX042_00400	COG0625	glutathione transferase activity
CX042_00415	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CX042_00420	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CX042_00450	COG0438	transferase activity, transferring glycosyl groups
CX042_00455	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CX042_00460	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CX042_00490	COG0859	PFAM glycosyl transferase family 9
CX042_00505	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CX042_00515	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CX042_00520	COG1127	ABC transporter
CX042_00540	COG1686	Belongs to the peptidase S11 family
CX042_00550	COG2921	Belongs to the UPF0250 family
CX042_00555	COG0321	lipoyl(octanoyl) transferase activity
CX042_00560	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CX042_00595	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CX042_00605	COG0018	arginyl-trna synthetase
CX042_00625	COG0395	ABC-type sugar transport system, permease component
CX042_00630	COG1175	transmembrane transport
CX042_00635	COG1653	transport
CX042_00640	COG3842	ATPase activity
CX042_00645	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CX042_00655	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CX042_00675	COG1609	Transcriptional regulator
CX042_00685	COG0154	amidase activity
CX042_00690	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CX042_00700	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CX042_00710	COG0583	DNA-binding transcription factor activity
CX042_00730	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CX042_00745	COG1802	Transcriptional regulator
CX042_00760	COG1024	Enoyl-CoA hydratase
CX042_00775	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_00790	COG1984	allophanate hydrolase subunit 2
CX042_00795	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CX042_00805	COG0583	DNA-binding transcription factor activity
CX042_00810	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CX042_00820	COG5002	protein histidine kinase activity
CX042_00830	COG5002	protein histidine kinase activity
CX042_00835	COG0745	RESPONSE REGULATOR receiver
CX042_00840	COG2226	methyltransferase
CX042_00855	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CX042_00875	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CX042_00885	COG0513	Belongs to the DEAD box helicase family
CX042_00890	COG1280	lysine exporter protein (LysE YggA)
CX042_00895	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CX042_00935	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CX042_00935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CX042_00945	COG0489	protein tyrosine kinase activity
CX042_00960	COG0717	Belongs to the dCTP deaminase family
CX042_00985	COG1982	Orn Lys Arg decarboxylase major
CX042_00990	COG2081	HI0933 family
CX042_01005	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CX042_01015	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CX042_01020	COG0509	glycine decarboxylation via glycine cleavage system
CX042_01025	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CX042_01025	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CX042_01065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CX042_01080	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CX042_01090	COG1414	Transcriptional regulator
CX042_01095	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_01100	COG2031	fatty acid transporter
CX042_01105	COG1250	3-hydroxyacyl-CoA dehydrogenase
CX042_01115	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CX042_01120	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CX042_01130	COG4257	antibiotic catabolic process
CX042_01155	COG1012	belongs to the aldehyde dehydrogenase family
CX042_01160	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CX042_01165	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CX042_01190	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_01200	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CX042_01210	COG2188	Transcriptional regulator
CX042_01215	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CX042_01240	COG0617	tRNA 3'-terminal CCA addition
CX042_01255	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CX042_01260	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CX042_01265	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CX042_01270	COG0586	Pfam SNARE associated Golgi protein
CX042_01275	COG0860	N-Acetylmuramoyl-L-alanine amidase
CX042_01280	COG0802	atpase or kinase
CX042_01285	COG0114	fumarate hydratase activity
CX042_01295	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_01305	COG0405	Gamma-glutamyltransferase
CX042_01310	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_01345	COG1294	oxidase, subunit
CX042_01355	COG4988	ABC transporter
CX042_01360	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CX042_01365	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CX042_01415	COG2969	positive regulation of protein catabolic process
CX042_01420	COG0625	glutathione transferase activity
CX042_01425	COG2857	Cytochrome c1
CX042_01430	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CX042_01435	COG0723	plastoquinol--plastocyanin reductase activity
CX042_01440	COG1970	mechanosensitive ion channel activity
CX042_01445	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CX042_01460	COG2808	Putative FMN-binding domain
CX042_01465	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CX042_01470	COG0747	negative chemotaxis
CX042_01475	COG0657	acetylesterase activity
CX042_01485	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CX042_01490	COG2207	Transcriptional regulator
CX042_01495	COG0129	dihydroxy-acid dehydratase activity
CX042_01500	COG2814	Major facilitator Superfamily
CX042_01505	COG0583	DNA-binding transcription factor activity
CX042_01515	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CX042_01555	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_01565	COG0411	ABC transporter
CX042_01570	COG0410	ABC transporter
CX042_01585	COG1024	Enoyl-CoA hydratase
CX042_01590	COG1960	acyl-CoA dehydrogenase activity
CX042_01615	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CX042_01635	COG1678	Uncharacterized ACR, COG1678
CX042_01640	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CX042_01645	COG0540	Belongs to the ATCase OTCase family
CX042_01660	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CX042_01670	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CX042_01705	COG1234	tRNA 3'-trailer cleavage
CX042_01725	COG3064	Membrane
CX042_01740	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CX042_01755	COG1683	Conserved Protein
CX042_01760	COG1120	ATPase activity
CX042_01765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CX042_01770	COG4558	Periplasmic binding protein
CX042_01775	COG3720	iron ion transport
CX042_01785	COG3712	iron ion homeostasis
CX042_01790	COG1595	DNA-templated transcription, initiation
CX042_01825	COG1802	Transcriptional regulator
CX042_01835	COG3069	C4-dicarboxylate transmembrane transporter activity
CX042_01845	COG1012	belongs to the aldehyde dehydrogenase family
CX042_01880	COG2860	membrane
CX042_01885	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CX042_01890	COG0708	Exodeoxyribonuclease III
CX042_01895	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CX042_01900	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CX042_01905	COG0154	amidase activity
CX042_01910	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CX042_01915	COG1077	Cell shape determining protein MreB Mrl
CX042_01920	COG1792	Involved in formation and maintenance of cell shape
CX042_01930	COG0768	penicillin binding
CX042_01935	COG0772	Belongs to the SEDS family
CX042_01940	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CX042_01945	COG0471	metal ion transport
CX042_01950	COG1309	transcriptional regulator
CX042_01960	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CX042_01975	COG2823	Periplasmic or secreted lipoprotein
CX042_01980	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CX042_01995	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CX042_02015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_02025	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_02045	COG0492	ferredoxin-NADP+ reductase activity
CX042_02055	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_02060	COG1250	3-hydroxyacyl-CoA dehydrogenase
CX042_02060	COG1024	Enoyl-CoA hydratase
CX042_02065	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_02070	COG0028	Belongs to the TPP enzyme family
CX042_02095	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_02110	COG0697	spore germination
CX042_02140	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CX042_02145	COG0463	Glycosyl transferase, family 2
CX042_02160	COG0786	glutamate:sodium symporter activity
CX042_02170	COG2031	fatty acid transporter
CX042_02185	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CX042_02200	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CX042_02215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CX042_02225	COG1285	pathogenesis
CX042_02230	COG1253	flavin adenine dinucleotide binding
CX042_02235	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_02240	COG1024	Enoyl-CoA hydratase
CX042_02245	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_02250	COG0583	DNA-binding transcription factor activity
CX042_02255	COG1960	acyl-CoA dehydrogenase activity
CX042_02265	COG0183	Belongs to the thiolase family
CX042_02285	COG0583	DNA-binding transcription factor activity
CX042_02290	COG1278	Cold shock
CX042_02300	COG1802	Transcriptional regulator
CX042_02305	COG1012	belongs to the aldehyde dehydrogenase family
CX042_02310	COG2031	fatty acid transporter
CX042_02315	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CX042_02315	COG1017	nitric oxide dioxygenase activity
CX042_02320	COG0251	oxidation-reduction process
CX042_02340	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_02350	COG0583	DNA-binding transcription factor activity
CX042_02355	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_02365	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CX042_02370	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CX042_02375	COG0546	phosphoglycolate phosphatase activity
CX042_02385	COG1530	ribonuclease E activity
CX042_02410	COG0159	tryptophan synthase activity
CX042_02415	COG0133	tryptophan synthase activity
CX042_02425	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CX042_02430	COG3228	Belongs to the MtfA family
CX042_02440	COG0251	oxidation-reduction process
CX042_02445	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CX042_02450	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CX042_02465	COG2878	Part of a membrane complex involved in electron transport
CX042_02470	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CX042_02475	COG0411	ABC transporter
CX042_02490	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_02505	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CX042_02510	COG0411	ABC transporter
CX042_02525	COG1268	BioY protein
CX042_02530	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CX042_02535	COG1122	ATPase activity
CX042_02540	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CX042_02560	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CX042_02570	COG1196	nuclear chromosome segregation
CX042_02575	COG0477	Major facilitator Superfamily
CX042_02580	COG1573	uracil-dna glycosylase
CX042_02585	COG1214	PFAM Peptidase M22, glycoprotease
CX042_02590	COG0745	RESPONSE REGULATOR receiver
CX042_02600	COG2205	protein histidine kinase activity
CX042_02605	COG0450	alkyl hydroperoxide reductase
CX042_02610	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CX042_02630	COG2186	Transcriptional regulator
CX042_02650	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CX042_02660	COG0583	DNA-binding transcription factor activity
CX042_02670	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CX042_02675	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CX042_02680	COG0137	argininosuccinate synthase activity
CX042_02685	COG3158	transport of potassium into the cell
CX042_02690	COG0642	Histidine kinase
CX042_02695	COG0745	RESPONSE REGULATOR receiver
CX042_02720	COG0776	regulation of translation
CX042_02725	COG3128	pkhd-type hydroxylase
CX042_02735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CX042_02740	COG0557	exoribonuclease II activity
CX042_02760	COG2153	protein acetylation
CX042_02765	COG0679	Auxin Efflux Carrier
CX042_02770	COG2391	methyltransferase activity
CX042_02775	COG0069	glutamate synthase activity
CX042_02785	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CX042_02795	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CX042_02835	COG3706	GGDEF domain
CX042_02865	COG0583	DNA-binding transcription factor activity
CX042_02875	COG1053	succinate dehydrogenase
CX042_02895	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CX042_02900	COG0459	protein refolding
CX042_02905	COG3468	outer membrane autotransporter barrel domain protein
CX042_02920	COG1252	NADH dehydrogenase
CX042_02925	COG0284	orotidine-5'-phosphate decarboxylase activity
CX042_02930	COG1058	Belongs to the CinA family
CX042_02930	COG1546	Belongs to the CinA family
CX042_02935	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CX042_02945	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CX042_02950	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CX042_02990	COG3639	organic phosphonate transmembrane transporter activity
CX042_02995	COG3639	organic phosphonate transmembrane transporter activity
CX042_03015	COG0742	ribosomal rna small subunit methyltransferase
CX042_03020	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CX042_03025	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CX042_03030	COG3135	benzoate transporter
CX042_03045	COG0640	Transcriptional regulator
CX042_03075	COG4172	Belongs to the ABC transporter superfamily
CX042_03080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_03085	COG0601	transmembrane transport
CX042_03095	COG0281	malic enzyme
CX042_03095	COG0280	phosphate acetyltransferase
CX042_03155	COG0583	DNA-binding transcription factor activity
CX042_03170	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CX042_03175	COG0167	dihydroorotate dehydrogenase activity
CX042_03195	COG1414	Transcriptional regulator
CX042_03200	COG1058	Belongs to the CinA family
CX042_03200	COG1546	Belongs to the CinA family
CX042_03220	COG0513	Belongs to the DEAD box helicase family
CX042_03250	COG0429	hydrolase of the alpha beta-hydrolase fold
CX042_03255	COG4783	chaperone-mediated protein folding
CX042_03270	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CX042_03295	COG0006	proline dipeptidase activity
CX042_03305	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CX042_03325	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CX042_03330	COG0632	four-way junction helicase activity
CX042_03345	COG2255	four-way junction helicase activity
CX042_03350	COG0514	ATP-dependent DNA helicase (RecQ)
CX042_03365	COG0288	reversible hydration of carbon dioxide
CX042_03370	COG0154	amidase activity
CX042_03375	COG0683	leucine binding
CX042_03380	COG4211	Belongs to the binding-protein-dependent transport system permease family
CX042_03395	COG0410	ABC transporter
CX042_03410	COG1464	Belongs to the NlpA lipoprotein family
CX042_03550	COG1196	nuclear chromosome segregation
CX042_03620	COG2135	peptidase activity
CX042_03635	COG0494	nUDIX hydrolase
CX042_03640	COG0442	prolyl-tRNA aminoacylation
CX042_03645	COG0824	Thioesterase
CX042_03650	COG0811	peptide transport
CX042_03655	COG0848	biopolymer transport protein
CX042_03665	COG0823	Involved in the tonB-independent uptake of proteins
CX042_03680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CX042_03685	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CX042_03720	COG0700	Nucleoside recognition
CX042_03725	COG0469	pyruvate kinase activity
CX042_03730	COG1929	Belongs to the glycerate kinase type-1 family
CX042_03735	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CX042_03740	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CX042_03745	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CX042_03755	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CX042_03765	COG2154	pterin-4-alpha-carbinolamine dehydratase
CX042_03790	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CX042_03795	COG0154	amidase activity
CX042_03805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_03810	COG0601	transmembrane transport
CX042_03815	COG0747	negative chemotaxis
CX042_03835	COG0019	diaminopimelate decarboxylase activity
CX042_03850	COG2353	YceI-like domain
CX042_03855	COG4774	siderophore transport
CX042_03860	COG3712	iron ion homeostasis
CX042_03900	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CX042_03905	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CX042_03910	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CX042_03915	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CX042_03925	COG0142	geranyltranstransferase activity
CX042_03935	COG0583	DNA-binding transcription factor activity
CX042_03945	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
CX042_03950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_03965	COG2994	toxin metabolic process
CX042_03975	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
CX042_03980	COG2274	protein secretion by the type I secretion system
CX042_03985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CX042_03990	COG1538	Outer membrane efflux protein
CX042_04010	COG0765	amino acid transport
CX042_04015	COG1126	abc transporter atp-binding protein
CX042_04035	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_04045	COG1802	Transcriptional regulator
CX042_04055	COG1802	Transcriptional regulator
CX042_04065	COG0318	PFAM AMP-dependent synthetase and ligase
CX042_04075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_04085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CX042_04095	COG0028	Belongs to the TPP enzyme family
CX042_04115	COG0308	aminopeptidase N
CX042_04120	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CX042_04140	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CX042_04145	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CX042_04150	COG0560	Phosphoserine phosphatase
CX042_04155	COG0583	DNA-binding transcription factor activity
CX042_04160	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_04165	COG0028	Belongs to the TPP enzyme family
CX042_04180	COG4774	siderophore transport
CX042_04185	COG4774	siderophore transport
CX042_04195	COG1007	ATP synthesis coupled electron transport
CX042_04210	COG0713	ATP synthesis coupled electron transport
CX042_04220	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CX042_04225	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CX042_04230	COG1034	ATP synthesis coupled electron transport
CX042_04240	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CX042_04245	COG0649	NAD binding
CX042_04250	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CX042_04255	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CX042_04260	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CX042_04265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CX042_04295	COG0671	phosphoesterase, PA-phosphatase related
CX042_04305	COG1597	lipid kinase activity
CX042_04310	COG0583	DNA-binding transcription factor activity
CX042_04315	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CX042_04325	COG1733	regulation of RNA biosynthetic process
CX042_04330	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CX042_04335	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CX042_04350	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CX042_04370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_04390	COG3608	succinylglutamate desuccinylase aspartoacylase
CX042_04395	COG0626	cystathionine gamma-synthase activity
CX042_04400	COG0583	DNA-binding transcription factor activity
CX042_04435	COG3799	methylaspartate ammonia-lyase activity
CX042_04445	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CX042_04455	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CX042_04460	COG0149	triose-phosphate isomerase activity
CX042_04480	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CX042_04500	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CX042_04515	COG1183	phosphatidylcholine synthase activity
CX042_04520	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CX042_04525	COG0440	acetolactate synthase activity
CX042_04530	COG0028	Belongs to the TPP enzyme family
CX042_04545	COG5265	(ABC) transporter
CX042_04550	COG0500	methyltransferase
CX042_04570	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CX042_04590	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CX042_04600	COG0511	ligase activity, forming carbon-carbon bonds
CX042_04625	COG2188	Transcriptional regulator
CX042_04630	COG0439	Biotin carboxylase
CX042_04680	COG5265	(ABC) transporter
CX042_04690	COG0667	Aldo Keto reductase
CX042_04705	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CX042_04745	COG0583	DNA-binding transcription factor activity
CX042_04775	COG2814	Major facilitator Superfamily
CX042_04785	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CX042_04800	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CX042_04810	COG0287	Prephenate dehydrogenase
CX042_04815	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CX042_04820	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CX042_04840	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CX042_04845	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CX042_04850	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CX042_04855	COG1596	polysaccharide export
CX042_04855	COG1555	photosystem II stabilization
CX042_04870	COG2951	lytic endotransglycosylase activity
CX042_04875	COG0123	including yeast histone deacetylase and acetoin utilization protein
CX042_04890	COG1960	acyl-CoA dehydrogenase activity
CX042_04895	COG0450	alkyl hydroperoxide reductase
CX042_04915	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CX042_04950	COG0335	large ribosomal subunit rRNA binding
CX042_04965	COG0667	Aldo Keto reductase
CX042_04980	COG3161	chorismate lyase activity
CX042_04985	COG1187	pseudouridine synthase activity
CX042_05005	COG1538	Outer membrane efflux protein
CX042_05015	COG1999	signal sequence binding
CX042_05020	COG0339	signal peptide processing
CX042_05030	COG4566	intracellular signal transduction
CX042_05040	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CX042_05045	COG0508	dehydrogenase complex catalyzes the overall conversion of
CX042_05050	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CX042_05055	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CX042_05065	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CX042_05070	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CX042_05075	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CX042_05080	COG0126	phosphoglycerate kinase activity
CX042_05085	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CX042_05090	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CX042_05105	COG0625	glutathione transferase activity
CX042_05135	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CX042_05145	COG0521	Mo-molybdopterin cofactor biosynthetic process
CX042_05155	COG0739	heme binding
CX042_05165	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CX042_05175	COG1191	sigma factor activity
CX042_05205	COG2198	Histidine kinase
CX042_05205	COG0643	Histidine kinase
CX042_05210	COG0835	chemotaxis
CX042_05215	COG0840	transmembrane signaling receptor activity
CX042_05225	COG2201	protein-glutamate methylesterase activity
CX042_05230	COG0745	RESPONSE REGULATOR receiver
CX042_05235	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CX042_05260	COG0667	Aldo Keto reductase
CX042_05270	COG4535	Mg2 and Co2 transporter CorC
CX042_05275	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CX042_05280	COG1702	phosphate starvation-inducible protein PhoH
CX042_05285	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CX042_05300	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CX042_05305	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CX042_05310	COG1862	Preprotein translocase
CX042_05315	COG0343	queuine tRNA-ribosyltransferase activity
CX042_05320	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CX042_05325	COG2027	D-alanyl-D-alanine carboxypeptidase
CX042_05330	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CX042_05345	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CX042_05345	COG1648	precorrin-2 dehydrogenase activity
CX042_05370	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CX042_05375	COG0741	lytic transglycosylase activity
CX042_05380	COG0436	Aminotransferase
CX042_05390	COG0280	phosphate acetyltransferase
CX042_05390	COG0281	malic enzyme
CX042_05400	COG2732	(Barnase) inhibitor
CX042_05415	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CX042_05440	COG0248	Ppx GppA phosphatase
CX042_05450	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CX042_05460	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CX042_05465	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CX042_05470	COG1534	Rna-binding protein
CX042_05500	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CX042_05515	COG1295	ribonuclease BN
CX042_05525	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CX042_05530	COG0745	RESPONSE REGULATOR receiver
CX042_05535	COG2205	protein histidine kinase activity
CX042_05570	COG1022	Amp-dependent synthetase and ligase
CX042_05585	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CX042_05590	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_05600	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CX042_05615	COG1136	(ABC) transporter
CX042_05620	COG0084	hydrolase, TatD family'
CX042_05645	COG0658	competence protein
CX042_05645	COG2333	competence protein COMEC
CX042_05655	COG0613	PHP domain protein
CX042_05675	COG3539	Fimbrial protein
CX042_05680	COG0280	phosphate acetyltransferase
CX042_05680	COG0281	malic enzyme
CX042_05690	COG1522	sequence-specific DNA binding
CX042_05700	COG0567	Dehydrogenase, E1 component
CX042_05705	COG0508	dehydrogenase complex catalyzes the overall conversion of
CX042_05710	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CX042_05715	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CX042_05720	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_05725	COG0583	DNA-binding transcription factor activity
CX042_05735	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_05760	COG0180	Tryptophanyl-tRNA synthetase
CX042_05765	COG2183	response to ionizing radiation
CX042_05770	COG1199	ATP-dependent helicase activity
CX042_05780	COG0564	pseudouridine synthase activity
CX042_05790	COG3243	poly(R)-hydroxyalkanoic acid synthase
CX042_05795	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_05800	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
CX042_05855	COG0583	DNA-binding transcription factor activity
CX042_05865	COG2814	Major facilitator Superfamily
CX042_05880	COG1619	proteins homologs of microcin C7 resistance protein MccF
CX042_05895	COG2084	Dehydrogenase
CX042_05900	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_05925	COG2988	succinylglutamate desuccinylase activity
CX042_05955	COG0765	amino acid transport
CX042_05960	COG0765	amino acid transport
CX042_05965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_06000	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CX042_06005	COG1595	DNA-templated transcription, initiation
CX042_06015	COG3530	Putative quorum-sensing-regulated virulence factor
CX042_06020	COG0494	nUDIX hydrolase
CX042_06035	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CX042_06040	COG0542	response to heat
CX042_06060	COG3468	outer membrane autotransporter barrel domain protein
CX042_06070	COG5441	Belongs to the UPF0261 family
CX042_06075	COG5564	TIM-barrel signal transduction protein
CX042_06090	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CX042_06105	COG1477	protein flavinylation
CX042_06125	COG1131	(ABC) transporter
CX042_06130	COG0842	Transport permease protein
CX042_06140	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CX042_06145	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
CX042_06145	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
CX042_06150	COG1562	ergosterol biosynthetic process
CX042_06155	COG1562	ergosterol biosynthetic process
CX042_06160	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CX042_06165	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_06185	COG2304	oxidoreductase activity
CX042_06205	COG0534	Mate efflux family protein
CX042_06215	COG0254	rRNA binding
CX042_06220	COG3483	tryptophan 2,3-dioxygenase activity
CX042_06225	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CX042_06230	COG2003	Belongs to the UPF0758 family
CX042_06235	COG1047	Peptidyl-prolyl cis-trans
CX042_06245	COG0625	glutathione transferase activity
CX042_06265	COG0523	cobalamin synthesis protein
CX042_06275	COG0583	DNA-binding transcription factor activity
CX042_06285	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CX042_06290	COG1187	pseudouridine synthase activity
CX042_06295	COG0779	Required for maturation of 30S ribosomal subunits
CX042_06300	COG2251	uridine kinase activity
CX042_06300	COG0195	Participates in both transcription termination and antitermination
CX042_06305	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CX042_06310	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CX042_06315	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CX042_06335	COG1611	Belongs to the LOG family
CX042_06350	COG0412	Dienelactone hydrolase
CX042_06355	COG1283	sodium-dependent phosphate transmembrane transporter activity
CX042_06360	COG1760	l-serine dehydratase
CX042_06365	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CX042_06370	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CX042_06380	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CX042_06390	COG0187	DNA topoisomerase II activity
CX042_06405	COG2311	Membrane
CX042_06430	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CX042_06450	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_06465	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CX042_06475	COG1653	transport
CX042_06480	COG1175	transmembrane transport
CX042_06485	COG0395	ABC-type sugar transport system, permease component
CX042_06490	COG3842	ATPase activity
CX042_06515	COG2363	Small membrane protein
CX042_06555	COG0095	Lipoate-protein ligase
CX042_06570	COG0625	glutathione transferase activity
CX042_06575	COG0386	Belongs to the glutathione peroxidase family
CX042_06595	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_06625	COG2259	Doxx family
CX042_06640	COG0667	Aldo Keto reductase
CX042_06670	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CX042_06690	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CX042_06700	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CX042_06750	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CX042_06755	COG3568	Endonuclease Exonuclease Phosphatase
CX042_06765	COG1695	Transcriptional regulator
CX042_06785	COG0583	DNA-binding transcription factor activity
CX042_06800	COG1802	Transcriptional regulator
CX042_06810	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_06820	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_06835	COG0066	3-isopropylmalate dehydratase activity
CX042_06845	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_06850	COG4948	Mandelate Racemase Muconate Lactonizing
CX042_06865	COG1126	abc transporter atp-binding protein
CX042_06875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_06915	COG1815	bacterial-type flagellum-dependent cell motility
CX042_06920	COG1558	bacterial-type flagellum-dependent cell motility
CX042_06925	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CX042_06930	COG1749	Flagellar hook protein flgE
CX042_06940	COG4786	Flagellar basal body rod
CX042_06945	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CX042_06950	COG1706	bacterial-type flagellum-dependent cell motility
CX042_06960	COG1256	bacterial-type flagellum assembly
CX042_06970	COG0840	transmembrane signaling receptor activity
CX042_06975	COG0840	transmembrane signaling receptor activity
CX042_06980	COG0840	transmembrane signaling receptor activity
CX042_07000	COG1338	Plays a role in the flagellum-specific transport system
CX042_07020	COG1580	Controls the rotational direction of flagella during chemotaxis
CX042_07045	COG1157	protein secretion by the type III secretion system
CX042_07050	COG1317	bacterial-type flagellum organization
CX042_07055	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CX042_07065	COG1677	Flagellar hook-basal body complex protein FliE
CX042_07075	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CX042_07110	COG0285	dihydrofolate synthase activity
CX042_07140	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CX042_07145	COG0024	Methionine aminopeptidase
CX042_07150	COG0052	Belongs to the universal ribosomal protein uS2 family
CX042_07155	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CX042_07160	COG0528	UMP kinase activity
CX042_07165	COG0233	cytoplasmic translational termination
CX042_07170	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CX042_07180	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CX042_07185	COG0750	zinc metalloprotease
CX042_07190	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CX042_07195	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CX042_07200	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CX042_07205	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CX042_07215	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CX042_07220	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CX042_07225	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CX042_07230	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CX042_07240	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CX042_07240	COG0519	Catalyzes the synthesis of GMP from XMP
CX042_07255	COG0330	HflC and HflK could
CX042_07260	COG3706	GGDEF domain
CX042_07265	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CX042_07275	COG2867	negative regulation of translational initiation
CX042_07285	COG1960	acyl-CoA dehydrogenase activity
CX042_07290	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CX042_07325	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CX042_07330	COG0505	Belongs to the CarA family
CX042_07335	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CX042_07345	COG0406	alpha-ribazole phosphatase activity
CX042_07355	COG3842	ATPase activity
CX042_07375	COG5001	Diguanylate cyclase
CX042_07380	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CX042_07385	COG4783	chaperone-mediated protein folding
CX042_07390	COG1763	Mo-molybdopterin cofactor biosynthetic process
CX042_07395	COG0303	'Molybdopterin
CX042_07400	COG0746	molybdenum cofactor guanylyltransferase activity
CX042_07405	COG0489	protein tyrosine kinase activity
CX042_07435	COG0243	molybdopterin cofactor binding
CX042_07435	COG3383	formate dehydrogenase (NAD+) activity
CX042_07470	COG1122	ATPase activity
CX042_07480	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CX042_07485	COG0066	3-isopropylmalate dehydratase activity
CX042_07490	COG0473	3-isopropylmalate dehydrogenase activity
CX042_07495	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CX042_07505	COG0101	tRNA pseudouridine synthase activity
CX042_07510	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CX042_07525	COG0135	phosphoribosylanthranilate isomerase activity
CX042_07540	COG3022	response to hydroperoxide
CX042_07560	COG3706	GGDEF domain
CX042_07580	COG2197	response regulator
CX042_07585	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CX042_07590	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CX042_07595	COG0189	ligase activity
CX042_07605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CX042_07610	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CX042_07625	COG2423	ornithine cyclodeaminase activity
CX042_07635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_07640	COG0765	amino acid transport
CX042_07645	COG0765	amino acid transport
CX042_07650	COG1126	abc transporter atp-binding protein
CX042_07705	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CX042_07715	COG2944	sequence-specific DNA binding
CX042_07725	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CX042_07730	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CX042_07735	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CX042_07740	COG0009	L-threonylcarbamoyladenylate synthase
CX042_07745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_07750	COG1414	Transcriptional regulator
CX042_07765	COG0765	amino acid transport
CX042_07770	COG1126	abc transporter atp-binding protein
CX042_07775	COG0028	Belongs to the TPP enzyme family
CX042_07790	COG0028	Belongs to the TPP enzyme family
CX042_07795	COG0583	DNA-binding transcription factor activity
CX042_07800	COG4974	Belongs to the 'phage' integrase family
CX042_07805	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CX042_07810	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CX042_07825	COG1686	Belongs to the peptidase S11 family
CX042_07845	COG1074	ATP-dependent DNA helicase activity
CX042_07855	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CX042_07860	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CX042_07865	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CX042_07885	COG2321	neutral zinc metallopeptidase
CX042_07890	COG0009	L-threonylcarbamoyladenylate synthase
CX042_07935	COG3360	Dodecin
CX042_07940	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CX042_07945	COG2850	peptidyl-arginine hydroxylation
CX042_07950	COG3539	Fimbrial protein
CX042_07955	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CX042_07960	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CX042_07975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_07980	COG0765	amino acid transport
CX042_07985	COG1126	abc transporter atp-binding protein
CX042_07990	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CX042_07995	COG1758	RNA polymerase activity
CX042_08000	COG0194	GDP metabolic process
CX042_08005	COG3258	Cytochrome c
CX042_08010	COG2863	cytochrome
CX042_08015	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_08020	COG0791	NLP P60 protein
CX042_08025	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CX042_08045	COG1561	YicC-like family, N-terminal region
CX042_08050	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CX042_08065	COG0840	transmembrane signaling receptor activity
CX042_08070	COG2200	EAL domain
CX042_08070	COG2199	diguanylate cyclase activity
CX042_08075	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CX042_08085	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CX042_08095	COG3852	Histidine kinase
CX042_08100	COG2204	response regulator
CX042_08105	COG0583	DNA-binding transcription factor activity
CX042_08110	COG1741	Belongs to the pirin family
CX042_08115	COG1741	Belongs to the pirin family
CX042_08125	COG3842	ATPase activity
CX042_08130	COG1178	ABC-type Fe3 transport system permease component
CX042_08135	COG1840	ABC-type Fe3 transport system, periplasmic component
CX042_08145	COG0583	DNA-binding transcription factor activity
CX042_08155	COG0656	L-ascorbic acid biosynthetic process
CX042_08170	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CX042_08175	COG0583	DNA-binding transcription factor activity
CX042_08190	COG0783	Belongs to the Dps family
CX042_08210	COG0463	Glycosyl transferase, family 2
CX042_08230	COG0438	transferase activity, transferring glycosyl groups
CX042_08245	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CX042_08270	COG0300	oxidoreductase activity
CX042_08315	COG0861	Integral membrane protein TerC family
CX042_08320	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_08340	COG0714	Associated with various cellular activities
CX042_08375	COG3119	arylsulfatase activity
CX042_08400	COG2197	response regulator
CX042_08410	COG2944	sequence-specific DNA binding
CX042_08420	COG0625	glutathione transferase activity
CX042_08450	COG0179	Fumarylacetoacetate (FAA) hydrolase
CX042_08455	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_08500	COG0431	NADPH-dependent FMN reductase
CX042_08530	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_08535	COG0583	DNA-binding transcription factor activity
CX042_08555	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CX042_08555	COG2111	Na H antiporter
CX042_08560	COG1006	Multisubunit Na H antiporter MnhC subunit
CX042_08565	COG0651	ATP synthesis coupled electron transport
CX042_08570	COG1863	multisubunit Na H antiporter MnhE subunit
CX042_08575	COG2212	antiporter activity
CX042_08600	COG0590	tRNA wobble adenosine to inosine editing
CX042_08605	COG1619	proteins homologs of microcin C7 resistance protein MccF
CX042_08610	COG1024	Enoyl-CoA hydratase
CX042_08625	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CX042_08630	COG0488	(ABC) transporter
CX042_08665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CX042_08665	COG1017	nitric oxide dioxygenase activity
CX042_08670	COG1959	2 iron, 2 sulfur cluster binding
CX042_08675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_08695	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CX042_08700	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CX042_08705	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CX042_08710	COG0084	hydrolase, TatD family'
CX042_08725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_08735	COG1126	abc transporter atp-binding protein
CX042_08745	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CX042_08760	COG0028	Belongs to the TPP enzyme family
CX042_08780	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CX042_08830	COG4336	lyase activity
CX042_08840	COG2205	protein histidine kinase activity
CX042_08840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_08845	COG2197	response regulator
CX042_08850	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
CX042_08850	COG3210	domain, Protein
CX042_08850	COG3064	Membrane
CX042_08860	COG3121	Chaperone
CX042_08865	COG3188	usher protein
CX042_08870	COG3539	Fimbrial protein
CX042_08875	COG2831	hemolysin activation secretion protein
CX042_08890	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CX042_08940	COG0668	transmembrane transport
CX042_08965	COG1253	flavin adenine dinucleotide binding
CX042_08970	COG1968	undecaprenyl-diphosphatase activity
CX042_08975	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CX042_08990	COG0215	cysteine-tRNA ligase activity
CX042_09000	COG0825	malonyl-CoA metabolic process
CX042_09010	COG0037	tRNA processing
CX042_09015	COG0527	aspartate kinase activity
CX042_09040	COG1250	3-hydroxyacyl-CoA dehydrogenase
CX042_09045	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CX042_09060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CX042_09065	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CX042_09070	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_09080	COG0583	DNA-binding transcription factor activity
CX042_09095	COG1176	ABC-type spermidine putrescine transport system, permease component I
CX042_09105	COG3842	ATPase activity
CX042_09115	COG0446	pyridine nucleotide-disulphide oxidoreductase
CX042_09115	COG1902	pentaerythritol trinitrate reductase activity
CX042_09120	COG1414	Transcriptional regulator
CX042_09125	COG1832	CoA-binding protein
CX042_09135	COG0251	oxidation-reduction process
CX042_09160	COG1902	pentaerythritol trinitrate reductase activity
CX042_09170	COG1215	transferase activity, transferring glycosyl groups
CX042_09175	COG1649	PFAM Uncharacterised BCR, COG1649
CX042_09175	COG0726	polysaccharide deacetylase
CX042_09195	COG1846	Transcriptional regulator
CX042_09200	COG2197	response regulator
CX042_09215	COG0166	Belongs to the GPI family
CX042_09220	COG1045	serine acetyltransferase
CX042_09230	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CX042_09235	COG0483	inositol monophosphate 1-phosphatase activity
CX042_09240	COG1012	belongs to the aldehyde dehydrogenase family
CX042_09245	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CX042_09260	COG0210	DNA helicase
CX042_09265	COG0598	Magnesium transport protein CorA
CX042_09275	COG0747	negative chemotaxis
CX042_09280	COG0601	transmembrane transport
CX042_09285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_09290	COG4172	Belongs to the ABC transporter superfamily
CX042_09295	COG1846	Transcriptional regulator
CX042_09350	COG4964	Belongs to the GSP D family
CX042_09390	COG2204	response regulator
CX042_09405	COG1595	DNA-templated transcription, initiation
CX042_09415	COG3474	cytochrome
CX042_09420	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CX042_09435	COG3384	dioxygenase
CX042_09440	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CX042_09470	COG2885	chlorophyll binding
CX042_09505	COG0697	spore germination
CX042_09510	COG0730	response to heat
CX042_09530	COG0583	DNA-binding transcription factor activity
CX042_09535	COG0427	acetyl-CoA hydrolase
CX042_09590	COG1250	3-hydroxyacyl-CoA dehydrogenase
CX042_09595	COG0154	amidase activity
CX042_09605	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CX042_09620	COG0495	leucyl-tRNA aminoacylation
CX042_09625	COG2814	Major facilitator Superfamily
CX042_09630	COG1846	Transcriptional regulator
CX042_09655	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CX042_09660	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CX042_09665	COG2814	Major facilitator Superfamily
CX042_09685	COG4176	ABC-type proline glycine betaine transport system permease component
CX042_09695	COG1942	4-Oxalocrotonate Tautomerase
CX042_09700	COG0183	Belongs to the thiolase family
CX042_09710	COG1802	Transcriptional regulator
CX042_09720	COG1024	Enoyl-CoA hydratase
CX042_09735	COG2032	superoxide dismutase activity
CX042_09750	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CX042_09775	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CX042_09780	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CX042_09790	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CX042_09795	COG0736	holo-[acyl-carrier-protein] synthase activity
CX042_09800	COG1472	Belongs to the glycosyl hydrolase 3 family
CX042_09805	COG0322	excinuclease ABC activity
CX042_09810	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CX042_09820	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CX042_09820	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CX042_09825	COG2224	Isocitrate lyase
CX042_09845	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_09855	COG4638	Rieske (2fe-2S)
CX042_09860	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CX042_09865	COG1024	Enoyl-CoA hydratase
CX042_09875	COG0633	Ferredoxin
CX042_09880	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_09895	COG0183	Belongs to the thiolase family
CX042_09910	COG0583	DNA-binding transcription factor activity
CX042_09940	COG2346	COG2346, Truncated hemoglobins
CX042_10070	COG2207	Transcriptional regulator
CX042_10120	COG1132	(ABC) transporter
CX042_10145	COG0659	secondary active sulfate transmembrane transporter activity
CX042_10175	COG2169	Transcriptional regulator
CX042_10180	COG5507	3-demethylubiquinone-9 3-methyltransferase
CX042_10185	COG0384	phenazine biosynthesis protein PhzF
CX042_10190	COG0583	DNA-binding transcription factor activity
CX042_10195	COG2733	membrane
CX042_10210	COG1012	belongs to the aldehyde dehydrogenase family
CX042_10215	COG3284	Transcriptional regulator
CX042_10240	COG1380	Effector of murein hydrolase LrgA
CX042_10245	COG4106	trans-aconitate 2-methyltransferase activity
CX042_10245	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CX042_10255	COG0156	8-amino-7-oxononanoate synthase activity
CX042_10325	COG1131	(ABC) transporter
CX042_10330	COG0842	Transport permease protein
CX042_10335	COG0628	permease
CX042_10365	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CX042_10375	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CX042_10385	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CX042_10390	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CX042_10395	COG0330	HflC and HflK could
CX042_10400	COG0330	HflC and HflK could
CX042_10405	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CX042_10410	COG1923	regulation of RNA biosynthetic process
CX042_10415	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CX042_10420	COG1160	GTP binding
CX042_10425	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CX042_10430	COG2976	Protein conserved in bacteria
CX042_10435	COG0124	histidyl-tRNA synthetase
CX042_10440	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CX042_10450	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CX042_10455	COG0105	UTP biosynthetic process
CX042_10460	COG0525	valine-tRNA ligase activity
CX042_10475	COG0642	Histidine kinase
CX042_10500	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CX042_10505	COG0336	Belongs to the RNA methyltransferase TrmD family
CX042_10510	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CX042_10515	COG0228	four-way junction DNA binding
CX042_10525	COG0425	Belongs to the sulfur carrier protein TusA family
CX042_10530	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CX042_10575	COG0154	amidase activity
CX042_10580	COG4172	Belongs to the ABC transporter superfamily
CX042_10585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_10590	COG0601	transmembrane transport
CX042_10595	COG0747	negative chemotaxis
CX042_10620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_10630	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CX042_10650	COG3395	kinase activity
CX042_10665	COG1024	Enoyl-CoA hydratase
CX042_10685	COG0633	Ferredoxin
CX042_10690	COG0443	Heat shock 70 kDa protein
CX042_10695	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CX042_10700	COG0316	Belongs to the HesB IscA family
CX042_10705	COG0822	iron-sulfur transferase activity
CX042_10710	COG1104	cysteine desulfurase activity
CX042_10720	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CX042_10725	COG0556	nucleotide-excision repair
CX042_10735	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CX042_10765	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CX042_10785	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_10790	COG0183	Belongs to the thiolase family
CX042_10800	COG1024	Enoyl-CoA hydratase
CX042_10815	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_10820	COG0583	DNA-binding transcription factor activity
CX042_10825	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CX042_10830	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CX042_10835	COG0740	serine-type endopeptidase activity
CX042_10840	COG0544	peptidyl-prolyl cis-trans isomerase activity
CX042_10850	COG1278	Cold shock
CX042_10860	COG1278	Cold shock
CX042_10895	COG2171	N-acyltransferase activity
CX042_10900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CX042_10905	COG2890	protein-(glutamine-N5) methyltransferase activity
CX042_10910	COG0488	(ABC) transporter
CX042_10915	COG4771	TonB-dependent receptor
CX042_10920	COG0210	DNA helicase
CX042_10940	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CX042_10945	COG0196	riboflavin kinase activity
CX042_10950	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CX042_10955	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CX042_10960	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CX042_10970	COG1522	sequence-specific DNA binding
CX042_10990	COG2951	lytic endotransglycosylase activity
CX042_10995	COG2833	Protein of unknown function (DUF455)
CX042_11025	COG3237	CsbD-like
CX042_11035	COG2823	Periplasmic or secreted lipoprotein
CX042_11055	COG4181	ATPase activity
CX042_11065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CX042_11070	COG0584	glycerophosphoryl diester phosphodiesterase
CX042_11075	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CX042_11085	COG0678	peroxiredoxin activity
CX042_11085	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CX042_11095	COG0789	Transcriptional regulator
CX042_11100	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CX042_11125	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CX042_11130	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CX042_11135	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CX042_11145	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CX042_11150	COG2252	PERMEase
CX042_11160	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CX042_11190	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CX042_11230	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CX042_11235	COG1366	Belongs to the anti-sigma-factor antagonist family
CX042_11240	COG2172	sigma factor antagonist activity
CX042_11245	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CX042_11255	COG2770	Histidine kinase
CX042_11255	COG2208	phosphoserine phosphatase activity
CX042_11280	COG1595	DNA-templated transcription, initiation
CX042_11295	COG4792	protein secretion
CX042_11300	COG4791	protein targeting
CX042_11305	COG4794	Type iii secretion
CX042_11310	COG4790	Type iii secretion
CX042_11315	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CX042_11345	COG4669	(LipO)protein
CX042_11410	COG4789	Type iii secretion
CX042_11440	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CX042_11445	COG0840	transmembrane signaling receptor activity
CX042_11450	COG2233	PERMEase
CX042_11480	COG1840	ABC-type Fe3 transport system, periplasmic component
CX042_11485	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CX042_11490	COG1178	ABC-type Fe3 transport system permease component
CX042_11495	COG3842	ATPase activity
CX042_11500	COG0583	DNA-binding transcription factor activity
CX042_11520	COG0501	Belongs to the peptidase M48B family
CX042_11530	COG0697	spore germination
CX042_11540	COG1846	Transcriptional regulator
CX042_11550	COG1566	PFAM secretion protein HlyD family protein
CX042_11555	COG2814	Major facilitator Superfamily
CX042_11560	COG0473	3-isopropylmalate dehydrogenase activity
CX042_11570	COG0747	negative chemotaxis
CX042_11580	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_11595	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CX042_11620	COG1012	belongs to the aldehyde dehydrogenase family
CX042_11630	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CX042_11635	COG1115	amino acid carrier protein
CX042_11640	COG0433	COG0433 Predicted ATPase
CX042_11645	COG0217	transcriptional regulatory protein
CX042_11650	COG0151	Belongs to the GarS family
CX042_11655	COG0408	coproporphyrinogen oxidase activity
CX042_11660	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CX042_11665	COG0799	negative regulation of ribosome biogenesis
CX042_11670	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CX042_11675	COG0424	maF-like protein
CX042_11680	COG3468	outer membrane autotransporter barrel domain protein
CX042_11720	COG1530	ribonuclease E activity
CX042_11725	COG0077	Prephenate dehydratase
CX042_11740	COG1132	(ABC) transporter
CX042_11745	COG0859	PFAM glycosyl transferase family 9
CX042_11770	COG2194	sulfuric ester hydrolase activity
CX042_11775	COG0438	transferase activity, transferring glycosyl groups
CX042_11780	COG0463	Glycosyl transferase, family 2
CX042_11785	COG0726	polysaccharide deacetylase
CX042_11790	COG0438	transferase activity, transferring glycosyl groups
CX042_11805	COG1643	Atp-dependent helicase
CX042_11810	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CX042_11810	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CX042_11815	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CX042_11825	COG0704	Plays a role in the regulation of phosphate uptake
CX042_11830	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CX042_11835	COG1960	acyl-CoA dehydrogenase activity
CX042_11850	COG2094	Belongs to the DNA glycosylase MPG family
CX042_11860	COG1177	transmembrane transport
CX042_11865	COG1176	ABC-type spermidine putrescine transport system, permease component I
CX042_11870	COG3842	ATPase activity
CX042_11875	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CX042_11880	COG3642	lipopolysaccharide core region biosynthetic process
CX042_11890	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CX042_11895	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CX042_11920	COG0372	Belongs to the citrate synthase family
CX042_11925	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CX042_11930	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CX042_11935	COG1053	succinate dehydrogenase
CX042_11940	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CX042_11945	COG2009	succinate dehydrogenase
CX042_11950	COG2188	Transcriptional regulator
CX042_11955	COG0039	L-malate dehydrogenase activity
CX042_12010	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CX042_12020	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CX042_12050	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CX042_12055	COG0148	phosphopyruvate hydratase activity
CX042_12070	COG0504	CTP synthase activity
CX042_12095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_12105	COG0747	negative chemotaxis
CX042_12110	COG4172	Belongs to the ABC transporter superfamily
CX042_12115	COG1446	asparaginase
CX042_12145	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CX042_12160	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CX042_12165	COG0697	spore germination
CX042_12170	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CX042_12180	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CX042_12190	COG0791	NLP P60 protein
CX042_12205	COG0583	DNA-binding transcription factor activity
CX042_12220	COG0583	DNA-binding transcription factor activity
CX042_12235	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CX042_12250	COG0670	Belongs to the BI1 family
CX042_12255	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_12270	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CX042_12280	COG1381	Involved in DNA repair and RecF pathway recombination
CX042_12285	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CX042_12290	COG0571	ribonuclease III activity
CX042_12295	COG0681	Belongs to the peptidase S26 family
CX042_12300	COG0481	GTPase activity
CX042_12305	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CX042_12330	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CX042_12335	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CX042_12350	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CX042_12355	COG0416	fatty acid biosynthetic process
CX042_12360	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CX042_12365	COG1399	metal-binding, possibly nucleic acid-binding protein
CX042_12370	COG0424	maF-like protein
CX042_12380	COG3023	N-Acetylmuramoyl-L-alanine amidase
CX042_12395	COG3022	response to hydroperoxide
CX042_12405	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_12450	COG2814	Major facilitator Superfamily
CX042_12470	COG3706	GGDEF domain
CX042_12495	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CX042_12500	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CX042_12505	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CX042_12510	COG1674	ftsk spoiiie
CX042_12515	COG0492	ferredoxin-NADP+ reductase activity
CX042_12520	COG1193	negative regulation of DNA recombination
CX042_12535	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CX042_12550	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CX042_12555	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CX042_12560	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CX042_12570	COG0745	RESPONSE REGULATOR receiver
CX042_12615	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CX042_12635	COG0612	Peptidase, M16
CX042_12645	COG0443	Heat shock 70 kDa protein
CX042_12655	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CX042_12665	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CX042_12670	COG1420	regulation of RNA biosynthetic process
CX042_12675	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CX042_12680	COG0497	DNA recombination
CX042_12685	COG0735	belongs to the Fur family
CX042_12690	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CX042_12695	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CX042_12700	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CX042_12735	COG0446	pyridine nucleotide-disulphide oxidoreductase
CX042_12735	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CX042_12740	COG4311	Sarcosine oxidase, delta subunit
CX042_12745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_12755	COG0583	DNA-binding transcription factor activity
CX042_12765	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CX042_12790	COG4964	Belongs to the GSP D family
CX042_12830	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CX042_12850	COG0181	hydroxymethylbilane synthase activity
CX042_12855	COG0861	Integral membrane protein TerC family
CX042_12860	COG0861	Integral membrane protein TerC family
CX042_12865	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CX042_12870	COG0045	succinate-CoA ligase (ADP-forming) activity
CX042_12880	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CX042_12885	COG0583	DNA-binding transcription factor activity
CX042_12890	COG2137	regulation of response to DNA damage stimulus
CX042_12895	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CX042_12905	COG0642	Histidine kinase
CX042_12915	COG1024	Enoyl-CoA hydratase
CX042_12915	COG1250	3-hydroxyacyl-CoA dehydrogenase
CX042_12920	COG3842	ATPase activity
CX042_12935	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_12955	COG0583	DNA-binding transcription factor activity
CX042_12960	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_12970	COG2974	May be involved in recombination
CX042_12975	COG0540	Belongs to the ATCase OTCase family
CX042_13040	COG0776	regulation of translation
CX042_13045	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CX042_13045	COG0072	phenylalanine-tRNA ligase activity
CX042_13050	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CX042_13055	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CX042_13060	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CX042_13075	COG0756	dUTP diphosphatase activity
CX042_13085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CX042_13100	COG0500	methyltransferase
CX042_13115	COG0586	Pfam SNARE associated Golgi protein
CX042_13145	COG1609	Transcriptional regulator
CX042_13150	COG4172	Belongs to the ABC transporter superfamily
CX042_13160	COG0601	transmembrane transport
CX042_13165	COG0747	negative chemotaxis
CX042_13185	COG1280	lysine exporter protein (LysE YggA)
CX042_13200	COG2814	Major facilitator Superfamily
CX042_13230	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CX042_13250	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CX042_13285	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_13290	COG1116	anion transmembrane transporter activity
CX042_13300	COG1228	amidohydrolase
CX042_13315	COG0477	Major facilitator Superfamily
CX042_13325	COG3550	peptidyl-serine autophosphorylation
CX042_13340	COG0519	Catalyzes the synthesis of GMP from XMP
CX042_13340	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CX042_13385	COG0420	3'-5' exonuclease activity
CX042_13390	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_13420	COG0395	ABC-type sugar transport system, permease component
CX042_13430	COG3842	ATPase activity
CX042_13455	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_13460	COG1053	succinate dehydrogenase
CX042_13490	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CX042_13515	COG0602	queuosine metabolic process
CX042_13520	COG0720	synthase
CX042_13525	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CX042_13530	COG0235	Class ii aldolase
CX042_13560	COG3064	Membrane
CX042_13560	COG3210	domain, Protein
CX042_13560	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
CX042_13565	COG0047	phosphoribosylformylglycinamidine synthase activity
CX042_13565	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CX042_13570	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CX042_13575	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CX042_13580	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CX042_13600	COG3539	Fimbrial protein
CX042_13610	COG2050	protein possibly involved in aromatic compounds catabolism
CX042_13615	COG1024	Enoyl-CoA hydratase
CX042_13620	COG1012	belongs to the aldehyde dehydrogenase family
CX042_13640	COG2151	metal-sulfur cluster biosynthetic enzyme
CX042_13645	COG3396	Phenylacetate-CoA oxygenase
CX042_13650	COG3460	Phenylacetate-CoA oxygenase
CX042_13655	COG3396	Phenylacetate-CoA oxygenase
CX042_13660	COG3327	negative regulation of DNA-templated transcription, initiation
CX042_13670	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CX042_13675	COG0501	Belongs to the peptidase M48B family
CX042_13680	COG1162	GTPase activity
CX042_13695	COG0601	transmembrane transport
CX042_13700	COG0747	negative chemotaxis
CX042_13745	COG0668	transmembrane transport
CX042_13750	COG0165	Argininosuccinate lyase
CX042_13770	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CX042_13775	COG0303	'Molybdopterin
CX042_13780	COG0521	Mo-molybdopterin cofactor biosynthetic process
CX042_13795	COG0315	cyclic pyranopterin monophosphate synthase activity
CX042_13805	COG0412	Dienelactone hydrolase
CX042_13815	COG0678	peroxiredoxin activity
CX042_13825	COG0697	spore germination
CX042_13830	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CX042_13855	COG0789	Transcriptional regulator
CX042_13875	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_13885	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CX042_13890	COG1845	cytochrome c oxidase, subunit III
CX042_13895	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CX042_13905	COG0477	Major facilitator Superfamily
CX042_13940	COG1309	transcriptional regulator
CX042_13945	COG2271	Major facilitator Superfamily
CX042_13965	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_13980	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CX042_13980	COG0506	proline dehydrogenase activity
CX042_13980	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CX042_13990	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CX042_13990	COG3008	intermembrane lipid transfer
CX042_13995	COG2995	paraquat-inducible protein a
CX042_14000	COG0542	response to heat
CX042_14005	COG4953	penicillin-binding protein 1C
CX042_14015	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CX042_14020	COG1278	Cold shock
CX042_14030	COG0183	Belongs to the thiolase family
CX042_14035	COG0038	chloride channel
CX042_14040	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CX042_14045	COG1570	exodeoxyribonuclease VII activity
CX042_14055	COG0811	peptide transport
CX042_14060	COG0848	biopolymer transport protein
CX042_14065	COG1663	tetraacyldisaccharide 4'-kinase activity
CX042_14070	COG2835	tetraacyldisaccharide 4'-kinase activity
CX042_14075	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CX042_14080	COG0563	adenylate kinase activity
CX042_14090	COG0728	peptidoglycan biosynthetic process
CX042_14100	COG0268	Binds directly to 16S ribosomal RNA
CX042_14135	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CX042_14160	COG0436	Aminotransferase
CX042_14165	COG3737	Protein of unknown function (DUF498/DUF598)
CX042_14170	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CX042_14175	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CX042_14180	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CX042_14190	COG0305	Participates in initiation and elongation during chromosome replication
CX042_14200	COG0359	binds to the 23S rRNA
CX042_14205	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CX042_14210	COG2965	DNA replication, synthesis of RNA primer
CX042_14215	COG0360	Binds together with S18 to 16S ribosomal RNA
CX042_14220	COG1469	GTP cyclohydrolase I activity
CX042_14225	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CX042_14230	COG0142	geranyltranstransferase activity
CX042_14235	COG1722	exodeoxyribonuclease VII activity
CX042_14245	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_14265	COG2239	Acts as a magnesium transporter
CX042_14270	COG1607	acyl-coa hydrolase
CX042_14275	COG2855	membrane
CX042_14285	COG1473	amidohydrolase
CX042_14290	COG0318	PFAM AMP-dependent synthetase and ligase
CX042_14315	COG1501	Belongs to the glycosyl hydrolase 31 family
CX042_14320	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CX042_14325	COG2011	ABC-type metal ion transport system permease component
CX042_14345	COG1454	alcohol dehydrogenase
CX042_14375	COG2186	Transcriptional regulator
CX042_14380	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_14400	COG1175	transmembrane transport
CX042_14405	COG0395	ABC-type sugar transport system, permease component
CX042_14410	COG3842	ATPase activity
CX042_14425	COG1653	transport
CX042_14445	COG2818	Glycosylase
CX042_14450	COG2982	Protein involved in outer membrane biogenesis
CX042_14460	COG1309	transcriptional regulator
CX042_14465	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_14525	COG0583	DNA-binding transcription factor activity
CX042_14530	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CX042_14535	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CX042_14550	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_14555	COG0477	Major facilitator Superfamily
CX042_14565	COG0583	DNA-binding transcription factor activity
CX042_14570	COG1448	Aminotransferase
CX042_14575	COG1418	mRNA catabolic process
CX042_14600	COG1063	alcohol dehydrogenase
CX042_14620	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_14630	COG0318	PFAM AMP-dependent synthetase and ligase
CX042_14640	COG1522	sequence-specific DNA binding
CX042_14645	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_14650	COG0307	riboflavin synthase, alpha
CX042_14655	COG0154	amidase activity
CX042_14675	COG2807	transmembrane transport
CX042_14680	COG0590	tRNA wobble adenosine to inosine editing
CX042_14690	COG0583	DNA-binding transcription factor activity
CX042_14710	COG0410	ABC transporter
CX042_14725	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_14730	COG0251	oxidation-reduction process
CX042_14735	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CX042_14745	COG1414	Transcriptional regulator
CX042_14750	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_14765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_14780	COG1024	Enoyl-CoA hydratase
CX042_14785	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_14790	COG0154	amidase activity
CX042_14830	COG3909	cytochrome
CX042_14835	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CX042_14840	COG0625	glutathione transferase activity
CX042_14845	COG0730	response to heat
CX042_14850	COG0482	sulfurtransferase activity
CX042_14855	COG0583	DNA-binding transcription factor activity
CX042_14870	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CX042_14880	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CX042_14895	COG2819	hydrolase of the alpha beta superfamily
CX042_14900	COG0247	lactate metabolic process
CX042_14905	COG0277	FAD linked oxidase domain protein
CX042_14910	COG0277	FAD linked oxidase domain protein
CX042_14915	COG0277	FAD linked oxidase domain protein
CX042_14920	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
CX042_14920	COG3210	domain, Protein
CX042_14920	COG3210	domain, Protein
CX042_14920	COG3064	Membrane
CX042_14920	COG3064	Membrane
CX042_14920	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
CX042_14925	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CX042_14930	COG0312	modulator of DNA gyrase
CX042_14935	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CX042_15010	COG3220	belongs to the UPF0276 family
CX042_15030	COG0640	Transcriptional regulator
CX042_15035	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CX042_15040	COG1845	cytochrome c oxidase, subunit III
CX042_15045	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CX042_15055	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CX042_15095	COG0583	DNA-binding transcription factor activity
CX042_15130	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CX042_15130	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CX042_15145	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CX042_15150	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CX042_15160	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CX042_15175	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CX042_15180	COG0316	Belongs to the HesB IscA family
CX042_15190	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CX042_15195	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CX042_15200	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CX042_15205	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CX042_15210	COG0312	modulator of DNA gyrase
CX042_15215	COG3028	Belongs to the UPF0307 family
CX042_15230	COG1116	anion transmembrane transporter activity
CX042_15235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_15240	COG1335	isochorismatase
CX042_15245	COG0346	lactoylglutathione lyase activity
CX042_15250	COG0513	Belongs to the DEAD box helicase family
CX042_15255	COG3069	C4-dicarboxylate transmembrane transporter activity
CX042_15260	COG1802	Transcriptional regulator
CX042_15275	COG1042	CoA-binding domain protein
CX042_15275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CX042_15275	COG0045	succinate-CoA ligase (ADP-forming) activity
CX042_15280	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CX042_15295	COG1522	sequence-specific DNA binding
CX042_15330	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CX042_15335	COG1696	Membrane protein involved in D-alanine export
CX042_15375	COG0439	Biotin carboxylase
CX042_15380	COG0511	ligase activity, forming carbon-carbon bonds
CX042_15385	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CX042_15390	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CX042_15395	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CX042_15400	COG3150	esterase
CX042_15405	COG0557	exoribonuclease II activity
CX042_15415	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CX042_15435	COG1522	sequence-specific DNA binding
CX042_15440	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_15445	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_15465	COG0653	protein targeting
CX042_15470	COG0739	heme binding
CX042_15480	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CX042_15485	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CX042_15495	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CX042_15500	COG1181	Belongs to the D-alanine--D-alanine ligase family
CX042_15505	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CX042_15510	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CX042_15520	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CX042_15525	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CX042_15530	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CX042_15540	COG3116	cell division
CX042_15545	COG0275	rRNA processing
CX042_15550	COG2001	Belongs to the MraZ family
CX042_15565	COG0418	dihydroorotase activity
CX042_15570	COG1473	amidohydrolase
CX042_15610	COG1522	sequence-specific DNA binding
CX042_15620	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CX042_15625	COG4654	Cytochrome c, class I
CX042_15630	COG0129	dihydroxy-acid dehydratase activity
CX042_15635	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CX042_15690	COG2084	Dehydrogenase
CX042_15710	COG2096	Adenosyltransferase
CX042_15725	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CX042_15730	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CX042_15735	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CX042_15740	COG0523	cobalamin synthesis protein
CX042_15745	COG0735	belongs to the Fur family
CX042_15755	COG1121	(ABC) transporter
CX042_15765	COG0803	Belongs to the bacterial solute-binding protein 9 family
CX042_15775	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CX042_15785	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CX042_15795	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CX042_15800	COG1560	Kdo2-lipid A biosynthetic process
CX042_15810	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CX042_15825	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CX042_15830	COG1950	PFAM Membrane protein of
CX042_15845	COG0583	DNA-binding transcription factor activity
CX042_15855	COG0477	Major facilitator Superfamily
CX042_15870	COG0617	tRNA 3'-terminal CCA addition
CX042_15880	COG0513	Belongs to the DEAD box helicase family
CX042_15885	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CX042_15895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CX042_15900	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CX042_15975	COG0405	Gamma-glutamyltransferase
CX042_15985	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_16015	COG1309	transcriptional regulator
CX042_16030	COG0745	RESPONSE REGULATOR receiver
CX042_16080	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CX042_16105	COG0582	viral genome integration into host DNA
CX042_16110	COG0012	GTP binding
CX042_16120	COG0193	aminoacyl-tRNA hydrolase activity
CX042_16125	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CX042_16130	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CX042_16140	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CX042_16145	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CX042_16155	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CX042_16180	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CX042_16190	COG1368	sulfuric ester hydrolase activity
CX042_16195	COG0642	Histidine kinase
CX042_16200	COG0745	RESPONSE REGULATOR receiver
CX042_16205	COG0277	FAD linked oxidase domain protein
CX042_16220	COG0166	Belongs to the GPI family
CX042_16225	COG0438	transferase activity, transferring glycosyl groups
CX042_16230	COG0438	transferase activity, transferring glycosyl groups
CX042_16245	COG0438	transferase activity, transferring glycosyl groups
CX042_16260	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CX042_16265	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CX042_16270	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CX042_16280	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CX042_16290	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CX042_16305	COG0747	negative chemotaxis
CX042_16310	COG0601	transmembrane transport
CX042_16315	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_16335	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CX042_16340	COG0830	nickel cation binding
CX042_16350	COG0804	urea catabolic process
CX042_16355	COG0832	Belongs to the urease beta subunit family
CX042_16365	COG0831	urea catabolic process
CX042_16370	COG0829	nickel cation binding
CX042_16395	COG2188	Transcriptional regulator
CX042_16420	COG2719	SpoVR family
CX042_16425	COG2718	Belongs to the UPF0229 family
CX042_16445	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_16460	COG1960	acyl-CoA dehydrogenase activity
CX042_16480	COG0411	ABC transporter
CX042_16560	COG0328	RNA-DNA hybrid ribonuclease activity
CX042_16565	COG2226	methyltransferase
CX042_16575	COG0741	lytic transglycosylase activity
CX042_16575	COG1388	LysM domain
CX042_16595	COG2979	Protein of unknown function (DUF533)
CX042_16615	COG0745	RESPONSE REGULATOR receiver
CX042_16630	COG1271	oxidase subunit
CX042_16635	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CX042_16640	COG0850	regulation of cytokinetic process
CX042_16645	COG2894	cell division
CX042_16650	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CX042_16685	COG0601	transmembrane transport
CX042_16695	COG1215	transferase activity, transferring glycosyl groups
CX042_16710	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CX042_16720	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CX042_16740	COG0318	PFAM AMP-dependent synthetase and ligase
CX042_16745	COG2188	Transcriptional regulator
CX042_16750	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CX042_16755	COG2814	Major facilitator Superfamily
CX042_16765	COG0259	pyridoxamine-phosphate oxidase activity
CX042_16770	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CX042_16785	COG0583	DNA-binding transcription factor activity
CX042_16810	COG0134	indole-3-glycerol-phosphate synthase activity
CX042_16815	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CX042_16820	COG0512	Glutamine amidotransferase of anthranilate synthase
CX042_16830	COG0546	phosphoglycolate phosphatase activity
CX042_16840	COG2967	ApaG domain
CX042_16845	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CX042_16850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CX042_16855	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CX042_16860	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CX042_16870	COG0037	tRNA processing
CX042_16880	COG3634	alkyl hydroperoxide reductase activity
CX042_16885	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CX042_16890	COG1024	Enoyl-CoA hydratase
CX042_16915	COG0356	it plays a direct role in the translocation of protons across the membrane
CX042_16925	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CX042_16930	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CX042_16935	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CX042_16940	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CX042_16945	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CX042_16950	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CX042_16960	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CX042_16965	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CX042_16970	COG0210	DNA helicase
CX042_16980	COG2195	Cleaves the N-terminal amino acid of tripeptides
CX042_16990	COG4172	Belongs to the ABC transporter superfamily
CX042_16995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_17000	COG0601	transmembrane transport
CX042_17020	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CX042_17025	COG1024	Enoyl-CoA hydratase
CX042_17030	COG1024	Enoyl-CoA hydratase
CX042_17085	COG2132	Multicopper oxidase
CX042_17095	COG1024	Enoyl-CoA hydratase
CX042_17095	COG1250	3-hydroxyacyl-CoA dehydrogenase
CX042_17105	COG1414	Transcriptional regulator
CX042_17115	COG0154	amidase activity
CX042_17145	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CX042_17150	COG3568	Endonuclease Exonuclease Phosphatase
CX042_17155	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CX042_17190	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CX042_17200	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CX042_17215	COG1137	ATPase activity
CX042_17230	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CX042_17235	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CX042_17235	COG2010	Cytochrome c
CX042_17250	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CX042_17285	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_17295	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CX042_17300	COG2890	protein-(glutamine-N5) methyltransferase activity
CX042_17305	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CX042_17310	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CX042_17355	COG1960	acyl-CoA dehydrogenase activity
CX042_17365	COG0183	Belongs to the thiolase family
CX042_17370	COG1522	sequence-specific DNA binding
CX042_17375	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CX042_17395	COG1024	Enoyl-CoA hydratase
CX042_17410	COG0604	alcohol dehydrogenase
CX042_17430	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CX042_17440	COG1960	acyl-CoA dehydrogenase activity
CX042_17445	COG1960	acyl-CoA dehydrogenase activity
CX042_17450	COG0277	FAD linked oxidase domain protein
CX042_17460	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_17485	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CX042_17495	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_17500	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_17505	COG1960	acyl-CoA dehydrogenase activity
CX042_17525	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CX042_17530	COG1024	Enoyl-CoA hydratase
CX042_17535	COG1960	acyl-CoA dehydrogenase activity
CX042_17555	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CX042_17560	COG0022	dehydrogenase e1 component
CX042_17565	COG1024	Enoyl-CoA hydratase
CX042_17570	COG0508	dehydrogenase complex catalyzes the overall conversion of
CX042_17590	COG0683	leucine binding
CX042_17595	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_17600	COG0411	ABC transporter
CX042_17605	COG0410	ABC transporter
CX042_17610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CX042_17625	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_17650	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CX042_17655	COG0793	Belongs to the peptidase S41A family
CX042_17660	COG4942	peptidase
CX042_17665	COG0588	phosphoglycerate mutase activity
CX042_17675	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CX042_17680	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CX042_17685	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CX042_17690	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_17705	COG2226	methyltransferase
CX042_17710	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CX042_17725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_17730	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CX042_17755	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CX042_17780	COG1335	isochorismatase
CX042_17785	COG2309	aminopeptidase activity
CX042_17795	COG3473	Maleate cis-trans isomerase
CX042_17805	COG2068	MobA-Related Protein
CX042_17825	COG0569	domain protein
CX042_17830	COG2204	response regulator
CX042_17835	COG5000	phosphorelay sensor kinase activity
CX042_17845	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CX042_17845	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CX042_17855	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CX042_17890	COG0583	DNA-binding transcription factor activity
CX042_17910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CX042_17915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_17930	COG0758	DNA mediated transformation
CX042_17935	COG1522	sequence-specific DNA binding
CX042_17945	COG0242	peptide deformylase activity
CX042_17960	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CX042_17970	COG0546	phosphoglycolate phosphatase activity
CX042_17995	COG1942	4-Oxalocrotonate Tautomerase
CX042_18000	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CX042_18020	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CX042_18040	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CX042_18045	COG1024	Enoyl-CoA hydratase
CX042_18050	COG1414	Transcriptional regulator
CX042_18055	COG0318	PFAM AMP-dependent synthetase and ligase
CX042_18060	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_18110	COG0330	HflC and HflK could
CX042_18120	COG0251	oxidation-reduction process
CX042_18170	COG3723	Recombinational DNA repair protein, rece pathway
CX042_18205	COG0582	viral genome integration into host DNA
CX042_18240	COG0706	membrane insertase activity
CX042_18245	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CX042_18250	COG0594	ribonuclease P activity
CX042_18255	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CX042_18275	COG1414	Transcriptional regulator
CX042_18280	COG0154	amidase activity
CX042_18295	COG1304	FMN binding
CX042_18345	COG0183	Belongs to the thiolase family
CX042_18350	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CX042_18365	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CX042_18370	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_18390	COG1629	transport
CX042_18395	COG2922	Belongs to the Smg family
CX042_18420	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CX042_18425	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_18430	COG1028	Short-chain dehydrogenase reductase Sdr
CX042_18435	COG1012	belongs to the aldehyde dehydrogenase family
CX042_18445	COG0028	Belongs to the TPP enzyme family
CX042_18450	COG1522	sequence-specific DNA binding
CX042_18455	COG3781	membrane
CX042_18465	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CX042_18490	COG4206	TonB-dependent receptor
CX042_18495	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CX042_18500	COG2022	thiamine diphosphate biosynthetic process
CX042_18505	COG0351	phosphomethylpyrimidine kinase
CX042_18510	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CX042_18525	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CX042_18535	COG0628	permease
CX042_18545	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CX042_18560	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CX042_18565	COG0049	tRNA binding
CX042_18570	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CX042_18575	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CX042_18580	COG0051	transcription antitermination factor activity, RNA binding
CX042_18585	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CX042_18590	COG0088	Forms part of the polypeptide exit tunnel
CX042_18595	COG0089	rRNA binding
CX042_18600	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CX042_18605	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CX042_18610	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CX042_18615	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CX042_18620	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CX042_18625	COG0255	Belongs to the universal ribosomal protein uL29 family
CX042_18630	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CX042_18650	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CX042_18655	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CX042_18660	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CX042_18665	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CX042_18670	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CX042_18675	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CX042_18680	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CX042_18685	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CX042_18690	COG1841	ribosomal large subunit assembly
CX042_18695	COG0200	Binds to the 23S rRNA
CX042_18700	COG0201	protein transport
CX042_18705	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CX042_18710	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CX042_18715	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CX042_18720	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CX042_18725	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CX042_18730	COG0202	RNA polymerase activity
CX042_18735	COG0203	ribosomal protein L17
CX042_18740	COG0537	adenosine 5'-monophosphoramidase activity
CX042_18745	COG1324	tolerance protein
CX042_18750	COG4232	protein-disulfide reductase activity
CX042_18765	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CX042_18775	COG1333	cytochrome c biogenesis protein
CX042_18780	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CX042_18795	COG1965	Belongs to the frataxin family
CX042_18810	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CX042_18815	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CX042_18830	COG2814	Major facilitator Superfamily
CX042_18835	COG0629	single-stranded DNA binding
CX042_18885	COG0438	transferase activity, transferring glycosyl groups
CX042_18905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_18930	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CX042_18955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CX042_18960	COG1956	GAF domain-containing protein
CX042_18965	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CX042_18980	COG1652	LysM domain
CX042_18995	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CX042_19010	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CX042_19040	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_19055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_19070	COG1024	Enoyl-CoA hydratase
CX042_19085	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_19090	COG1309	transcriptional regulator
CX042_19095	COG2816	NAD+ diphosphatase activity
CX042_19100	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CX042_19140	COG0559	Belongs to the binding-protein-dependent transport system permease family
CX042_19185	COG2814	Major facilitator Superfamily
CX042_19190	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CX042_19210	COG1999	signal sequence binding
CX042_19215	COG0109	protoheme IX farnesyltransferase activity
CX042_19255	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CX042_19275	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CX042_19280	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CX042_19290	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CX042_19295	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CX042_19305	COG0067	glutamate synthase
CX042_19305	COG0070	glutamate synthase
CX042_19305	COG0069	glutamate synthase activity
CX042_19315	COG3047	cAMP biosynthetic process
CX042_19325	COG1127	ABC transporter
CX042_19330	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CX042_19335	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CX042_19340	COG2853	Lipoprotein
CX042_19355	COG0842	Transport permease protein
CX042_19365	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CX042_19370	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CX042_19375	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CX042_19380	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CX042_19385	COG0131	Imidazoleglycerol-phosphate dehydratase
CX042_19390	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CX042_19395	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CX042_19400	COG0107	imidazoleglycerol-phosphate synthase activity
CX042_19405	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CX042_19415	COG0537	adenosine 5'-monophosphoramidase activity
CX042_19420	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CX042_19425	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CX042_19440	COG3181	Tripartite tricarboxylate transporter family receptor
CX042_19480	COG3451	type IV secretory pathway VirB4
CX042_19500	COG3504	Conjugal transfer protein
CX042_19505	COG2948	multi-organism process
CX042_19520	COG0697	spore germination
CX042_19540	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CX042_19545	COG0747	negative chemotaxis
CX042_19555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CX042_19570	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CX042_19580	COG0494	nUDIX hydrolase
CX042_19595	COG1538	Outer membrane efflux protein
CX042_19615	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CX042_19620	COG0237	dephospho-CoA kinase activity
CX042_19625	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CX042_19640	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CX042_19645	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CX042_19655	COG0477	Major facilitator Superfamily
CX042_19660	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CX042_19675	COG1126	abc transporter atp-binding protein
CX042_19680	COG0765	amino acid transport
CX042_19685	COG4597	amino acid ABC transporter
CX042_19690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CX042_19695	COG2884	Cell division ATP-binding protein ftsE
CX042_19700	COG2177	Part of the ABC transporter FtsEX involved in
CX042_19705	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CX042_19715	COG1194	a g-specific adenine glycosylase
CX042_19725	COG2226	methyltransferase
CX042_19735	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_19740	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_19755	COG1024	Enoyl-CoA hydratase
CX042_19775	COG1024	Enoyl-CoA hydratase
CX042_19780	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CX042_19795	COG0753	catalase activity
CX042_19800	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CX042_19805	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CX042_19815	COG2175	clavaminate synthase activity
CX042_19820	COG1473	amidohydrolase
CX042_19825	COG4608	Belongs to the ABC transporter superfamily
CX042_19830	COG0444	Belongs to the ABC transporter superfamily
CX042_19840	COG0601	transmembrane transport
CX042_19845	COG0747	negative chemotaxis
CX042_19850	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CX042_19865	COG5002	protein histidine kinase activity
CX042_19865	COG3850	Histidine kinase
CX042_19885	COG0436	Aminotransferase