locus-tag class description D8X09_00005 PF01134 Glucose inhibited division protein A D8X09_00005 PF13932 GidA associated domain D8X09_00010 PF02527 rRNA small subunit methyltransferase G D8X09_00015 PF13614 AAA domain D8X09_00025 PF17762 HTH domain found in ParB protein D8X09_00025 PF02195 ParB-like nuclease domain D8X09_00050 PF03143 Elongation factor Tu C-terminal domain D8X09_00050 PF03144 Elongation factor Tu domain 2 D8X09_00050 PF00009 Elongation factor Tu GTP binding domain D8X09_00060 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D8X09_00065 PF00467 KOW motif D8X09_00065 PF02357 Transcription termination factor nusG D8X09_00070 PF00298 Ribosomal protein L11, RNA binding domain D8X09_00070 PF03946 Ribosomal protein L11, N-terminal domain D8X09_00075 PF00687 Ribosomal protein L1p/L10e family D8X09_00080 PF00466 Ribosomal protein L10 D8X09_00085 PF16320 Ribosomal protein L7/L12 dimerisation domain D8X09_00085 PF00542 Ribosomal protein L7/L12 C-terminal domain D8X09_00090 PF04563 RNA polymerase beta subunit D8X09_00090 PF04561 RNA polymerase Rpb2, domain 2 D8X09_00090 PF04565 RNA polymerase Rpb2, domain 3 D8X09_00090 PF10385 RNA polymerase beta subunit external 1 domain D8X09_00090 PF04560 RNA polymerase Rpb2, domain 7 D8X09_00090 PF00562 RNA polymerase Rpb2, domain 6 D8X09_00095 PF04983 RNA polymerase Rpb1, domain 3 D8X09_00095 PF04997 RNA polymerase Rpb1, domain 1 D8X09_00095 PF04998 RNA polymerase Rpb1, domain 5 D8X09_00095 PF05000 RNA polymerase Rpb1, domain 4 D8X09_00095 PF00623 RNA polymerase Rpb1, domain 2 D8X09_00125 PF00486 Transcriptional regulatory protein, C terminal D8X09_00125 PF00072 Response regulator receiver domain D8X09_00135 PF02515 CoA-transferase family III D8X09_00155 PF03466 LysR substrate binding domain D8X09_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_00160 PF00378 Enoyl-CoA hydratase/isomerase D8X09_00180 PF02091 Glycyl-tRNA synthetase alpha subunit D8X09_00185 PF05746 DALR anticodon binding domain D8X09_00185 PF02092 Glycyl-tRNA synthetase beta subunit D8X09_00195 PF01553 Acyltransferase D8X09_00205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D8X09_00210 PF01327 Polypeptide deformylase D8X09_00250 PF00561 alpha/beta hydrolase fold D8X09_00255 PF07021 Methionine biosynthesis protein MetW D8X09_00255 PF00561 alpha/beta hydrolase fold D8X09_00270 PF07690 Major Facilitator Superfamily D8X09_00280 PF01177 Asp/Glu/Hydantoin racemase D8X09_00285 PF00005 ABC transporter D8X09_00290 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_00295 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_00300 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_00335 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_00350 PF00970 Oxidoreductase FAD-binding domain D8X09_00350 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_00350 PF00175 Oxidoreductase NAD-binding domain D8X09_00355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_00365 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_00395 PF00183 Hsp90 protein D8X09_00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_00400 PF13417 Glutathione S-transferase, N-terminal domain D8X09_00400 PF00043 Glutathione S-transferase, C-terminal domain D8X09_00405 PF01510 N-acetylmuramoyl-L-alanine amidase D8X09_00415 PF01578 Cytochrome C assembly protein D8X09_00420 PF02881 SRP54-type protein, helical bundle domain D8X09_00420 PF00448 SRP54-type protein, GTPase domain D8X09_00420 PF02978 Signal peptide binding domain D8X09_00435 PF02719 Polysaccharide biosynthesis protein D8X09_00445 PF10997 Alternate to MurJ D8X09_00450 PF00534 Glycosyl transferases group 1 D8X09_00450 PF00862 Sucrose synthase D8X09_00455 PF02397 Bacterial sugar transferase D8X09_00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D8X09_00470 PF02350 UDP-N-acetylglucosamine 2-epimerase D8X09_00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D8X09_00480 PF00132 Bacterial transferase hexapeptide (six repeats) D8X09_00485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D8X09_00485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D8X09_00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D8X09_00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D8X09_00495 PF00534 Glycosyl transferases group 1 D8X09_00505 PF03309 Type III pantothenate kinase D8X09_00515 PF02405 Permease MlaE D8X09_00520 PF00005 ABC transporter D8X09_00540 PF07943 Penicillin-binding protein 5, C-terminal domain D8X09_00540 PF00768 D-alanyl-D-alanine carboxypeptidase D8X09_00545 PF01063 Amino-transferase class IV D8X09_00550 PF04359 Protein of unknown function (DUF493) D8X09_00555 PF03099 Biotin/lipoate A/B protein ligase family D8X09_00560 PF04055 Radical SAM superfamily D8X09_00560 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D8X09_00565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D8X09_00570 PF04321 RmlD substrate binding domain D8X09_00575 PF16363 GDP-mannose 4,6 dehydratase D8X09_00590 PF01053 Cys/Met metabolism PLP-dependent enzyme D8X09_00595 PF01323 DSBA-like thioredoxin domain D8X09_00595 PF00085 Thioredoxin D8X09_00605 PF05746 DALR anticodon binding domain D8X09_00605 PF00750 tRNA synthetases class I (R) D8X09_00605 PF03485 Arginyl tRNA synthetase N terminal domain D8X09_00625 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_00630 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_00635 PF13416 Bacterial extracellular solute-binding protein D8X09_00640 PF17912 MalK OB fold domain D8X09_00640 PF00005 ABC transporter D8X09_00645 PF00149 Calcineurin-like phosphoesterase D8X09_00655 PF00005 ABC transporter D8X09_00655 PF12857 TOBE-like domain D8X09_00660 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_00675 PF00356 Bacterial regulatory proteins, lacI family D8X09_00685 PF01425 Amidase D8X09_00690 PF00682 HMGL-like D8X09_00690 PF08502 LeuA allosteric (dimerisation) domain D8X09_00700 PF00309 Sigma-54 factor, Activator interacting domain (AID) D8X09_00700 PF04963 Sigma-54 factor, core binding domain D8X09_00700 PF04552 Sigma-54, DNA binding domain D8X09_00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_00710 PF03466 LysR substrate binding domain D8X09_00730 PF00585 C-terminal regulatory domain of Threonine dehydratase D8X09_00730 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_00745 PF00392 Bacterial regulatory proteins, gntR family D8X09_00745 PF07729 FCD domain D8X09_00750 PF02515 CoA-transferase family III D8X09_00760 PF00378 Enoyl-CoA hydratase/isomerase D8X09_00770 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_00785 PF02626 Carboxyltransferase domain, subdomain A and B D8X09_00790 PF02682 Carboxyltransferase domain, subdomain C and D D8X09_00800 PF03466 LysR substrate binding domain D8X09_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_00805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D8X09_00805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D8X09_00805 PF01842 ACT domain D8X09_00815 PF00512 His Kinase A (phospho-acceptor) domain D8X09_00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_00815 PF00672 HAMP domain D8X09_00820 PF00486 Transcriptional regulatory protein, C terminal D8X09_00820 PF00072 Response regulator receiver domain D8X09_00825 PF00989 PAS fold D8X09_00825 PF11808 Phosphate regulon sensor protein PhoR D8X09_00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_00825 PF00512 His Kinase A (phospho-acceptor) domain D8X09_00830 PF00486 Transcriptional regulatory protein, C terminal D8X09_00830 PF00072 Response regulator receiver domain D8X09_00835 PF01209 ubiE/COQ5 methyltransferase family D8X09_00850 PF03109 ABC1 family D8X09_00870 PF04536 TPM domain D8X09_00880 PF00270 DEAD/DEAH box helicase D8X09_00880 PF00271 Helicase conserved C-terminal domain D8X09_00885 PF01810 LysE type translocator D8X09_00890 PF16658 Class II release factor RF3, C-terminal domain D8X09_00890 PF03144 Elongation factor Tu domain 2 D8X09_00890 PF00009 Elongation factor Tu GTP binding domain D8X09_00900 PF00210 Ferritin-like domain D8X09_00930 PF09334 tRNA synthetases class I (M) D8X09_00930 PF01588 Putative tRNA binding domain D8X09_00940 PF10609 NUBPL iron-transfer P-loop NTPase D8X09_00955 PF00692 dUTPase D8X09_00980 PF01276 Orn/Lys/Arg decarboxylase, major domain D8X09_00980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D8X09_00980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D8X09_00995 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D8X09_00995 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D8X09_01000 PF02535 ZIP Zinc transporter D8X09_01005 PF01571 Aminomethyltransferase folate-binding domain D8X09_01005 PF08669 Glycine cleavage T-protein C-terminal barrel domain D8X09_01010 PF01597 Glycine cleavage H-protein D8X09_01015 PF02347 Glycine cleavage system P-protein D8X09_01020 PF07729 FCD domain D8X09_01020 PF00392 Bacterial regulatory proteins, gntR family D8X09_01025 PF02515 CoA-transferase family III D8X09_01055 PF12146 Serine aminopeptidase, S33 D8X09_01065 PF02426 Muconolactone delta-isomerase D8X09_01070 PF01144 Coenzyme A transferase D8X09_01075 PF01144 Coenzyme A transferase D8X09_01080 PF01614 Bacterial transcriptional regulator D8X09_01080 PF09339 IclR helix-turn-helix domain D8X09_01090 PF02667 Short chain fatty acid transporter D8X09_01095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_01095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_01100 PF03797 Autotransporter beta-domain D8X09_01100 PF00082 Subtilase family D8X09_01105 PF00311 Phosphoenolpyruvate carboxylase D8X09_01110 PF06508 Queuosine biosynthesis protein QueC D8X09_01140 PF02913 FAD linked oxidases, C-terminal domain D8X09_01140 PF01565 FAD binding domain D8X09_01145 PF00171 Aldehyde dehydrogenase family D8X09_01150 PF01964 Radical SAM ThiC family D8X09_01150 PF13667 ThiC-associated domain D8X09_01155 PF07549 SecD/SecF GG Motif D8X09_01155 PF02355 Protein export membrane protein D8X09_01160 PF09518 HindIII restriction endonuclease D8X09_01190 PF02627 Carboxymuconolactone decarboxylase family D8X09_01200 PF07702 UTRA domain D8X09_01200 PF00392 Bacterial regulatory proteins, gntR family D8X09_01205 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_01210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_01220 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_01225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D8X09_01230 PF01743 Poly A polymerase head domain D8X09_01230 PF12626 Polymerase A arginine-rich C-terminus D8X09_01230 PF12627 Probable RNA and SrmB- binding site of polymerase A D8X09_01240 PF00308 Bacterial dnaA protein D8X09_01245 PF00586 AIR synthase related protein, N-terminal domain D8X09_01245 PF02769 AIR synthase related protein, C-terminal domain D8X09_01255 PF08676 MutL C terminal dimerisation domain D8X09_01255 PF01119 DNA mismatch repair protein, C-terminal domain D8X09_01260 PF09335 SNARE associated Golgi protein D8X09_01265 PF01520 N-acetylmuramoyl-L-alanine amidase D8X09_01265 PF11741 AMIN domain D8X09_01270 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D8X09_01275 PF10415 Fumarase C C-terminus D8X09_01275 PF00206 Lyase D8X09_01285 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_01290 PF03466 LysR substrate binding domain D8X09_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_01300 PF02515 CoA-transferase family III D8X09_01305 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_01330 PF01654 Cytochrome bd terminal oxidase subunit I D8X09_01335 PF02322 Cytochrome bd terminal oxidase subunit II D8X09_01340 PF08173 Membrane bound YbgT-like protein D8X09_01345 PF00664 ABC transporter transmembrane region D8X09_01345 PF00005 ABC transporter D8X09_01350 PF00664 ABC transporter transmembrane region D8X09_01350 PF00005 ABC transporter D8X09_01355 PF00156 Phosphoribosyl transferase domain D8X09_01400 PF04386 Stringent starvation protein B D8X09_01405 PF02798 Glutathione S-transferase, N-terminal domain D8X09_01405 PF00043 Glutathione S-transferase, C-terminal domain D8X09_01410 PF02167 Cytochrome C1 family D8X09_01415 PF00032 Cytochrome b(C-terminal)/b6/petD D8X09_01415 PF00033 Cytochrome b/b6/petB D8X09_01420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D8X09_01420 PF00355 Rieske [2Fe-2S] domain D8X09_01425 PF01741 Large-conductance mechanosensitive channel, MscL D8X09_01430 PF01784 NIF3 (NGG1p interacting factor 3) D8X09_01435 PF13180 PDZ domain D8X09_01445 PF04299 Putative FMN-binding domain D8X09_01450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D8X09_01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_01460 PF07859 alpha/beta hydrolase fold D8X09_01470 PF08502 LeuA allosteric (dimerisation) domain D8X09_01470 PF00682 HMGL-like D8X09_01475 PF12833 Helix-turn-helix domain D8X09_01480 PF00920 Dehydratase family D8X09_01485 PF07690 Major Facilitator Superfamily D8X09_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_01490 PF03466 LysR substrate binding domain D8X09_01500 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) D8X09_01530 PF07859 alpha/beta hydrolase fold D8X09_01540 PF02653 Branched-chain amino acid transport system / permease component D8X09_01545 PF02653 Branched-chain amino acid transport system / permease component D8X09_01545 PF11862 Domain of unknown function (DUF3382) D8X09_01550 PF00005 ABC transporter D8X09_01550 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_01555 PF00005 ABC transporter D8X09_01570 PF00378 Enoyl-CoA hydratase/isomerase D8X09_01575 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_01575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_01575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_01580 PF00501 AMP-binding enzyme D8X09_01580 PF13193 AMP-binding enzyme C-terminal domain D8X09_01600 PF00202 Aminotransferase class-III D8X09_01605 PF02581 Thiamine monophosphate synthase D8X09_01610 PF08543 Phosphomethylpyrimidine kinase D8X09_01615 PF00301 Rubredoxin D8X09_01620 PF02622 Uncharacterized ACR, COG1678 D8X09_01625 PF03652 Holliday junction resolvase D8X09_01630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D8X09_01630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D8X09_01635 PF01979 Amidohydrolase family D8X09_01640 PF01553 Acyltransferase D8X09_01645 PF00149 Calcineurin-like phosphoesterase D8X09_01655 PF00912 Transglycosylase D8X09_01670 PF13193 AMP-binding enzyme C-terminal domain D8X09_01670 PF00501 AMP-binding enzyme D8X09_01675 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_01690 PF12706 Beta-lactamase superfamily domain D8X09_01695 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_01710 PF11737 Protein of unknown function (DUF3300) D8X09_01720 PF03707 Bacterial signalling protein N terminal repeat D8X09_01720 PF00990 Diguanylate cyclase, GGDEF domain D8X09_01720 PF00563 EAL domain D8X09_01725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D8X09_01725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D8X09_01730 PF13532 2OG-Fe(II) oxygenase superfamily D8X09_01735 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA D8X09_01740 PF04463 Protein of unknown function (DUF523) D8X09_01745 PF00005 ABC transporter D8X09_01750 PF01032 FecCD transport family D8X09_01755 PF01497 Periplasmic binding protein D8X09_01760 PF05171 Haemin-degrading HemS.ChuX domain D8X09_01765 PF07715 TonB-dependent Receptor Plug Domain D8X09_01765 PF04886 PT repeat D8X09_01765 PF00593 TonB dependent receptor D8X09_01770 PF04773 FecR protein D8X09_01770 PF16220 Domain of unknown function (DUF4880) D8X09_01775 PF04542 Sigma-70 region 2 D8X09_01775 PF08281 Sigma-70, region 4 D8X09_01800 PF02423 Ornithine cyclodeaminase/mu-crystallin family D8X09_01810 PF00392 Bacterial regulatory proteins, gntR family D8X09_01810 PF07729 FCD domain D8X09_01830 PF00171 Aldehyde dehydrogenase family D8X09_01840 PF00970 Oxidoreductase FAD-binding domain D8X09_01840 PF00175 Oxidoreductase NAD-binding domain D8X09_01840 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_01865 PF03458 UPF0126 domain D8X09_01870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D8X09_01870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D8X09_01875 PF03372 Endonuclease/Exonuclease/phosphatase family D8X09_01880 PF00156 Phosphoribosyl transferase domain D8X09_01885 PF02637 GatB domain D8X09_01885 PF02934 GatB/GatE catalytic domain D8X09_01890 PF01425 Amidase D8X09_01895 PF02686 Glu-tRNAGln amidotransferase C subunit D8X09_01905 PF04085 rod shape-determining protein MreC D8X09_01915 PF03717 Penicillin-binding Protein dimerisation domain D8X09_01915 PF00905 Penicillin binding protein transpeptidase domain D8X09_01920 PF01098 Cell cycle protein D8X09_01925 PF02615 Malate/L-lactate dehydrogenase D8X09_01930 PF00939 Sodium:sulfate symporter transmembrane region D8X09_01935 PF00440 Bacterial regulatory proteins, tetR family D8X09_01945 PF00696 Amino acid kinase family D8X09_01950 PF03180 NLPA lipoprotein D8X09_01955 PF00578 AhpC/TSA family D8X09_01960 PF04972 BON domain D8X09_01965 PF13580 SIS domain D8X09_01970 PF02021 Uncharacterised protein family UPF0102 D8X09_01975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D8X09_01980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D8X09_01980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D8X09_02000 PF02515 CoA-transferase family III D8X09_02005 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_02010 PF02515 CoA-transferase family III D8X09_02025 PF09339 IclR helix-turn-helix domain D8X09_02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_02040 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_02045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_02045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_02045 PF00378 Enoyl-CoA hydratase/isomerase D8X09_02050 PF02515 CoA-transferase family III D8X09_02055 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_02055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_02055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_02060 PF03466 LysR substrate binding domain D8X09_02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02070 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_02080 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_02095 PF00892 EamA-like transporter family D8X09_02100 PF01810 LysE type translocator D8X09_02105 PF12146 Serine aminopeptidase, S33 D8X09_02125 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D8X09_02130 PF00535 Glycosyl transferase family 2 D8X09_02145 PF03616 Sodium/glutamate symporter D8X09_02155 PF02667 Short chain fatty acid transporter D8X09_02170 PF00929 Exonuclease D8X09_02185 PF00009 Elongation factor Tu GTP binding domain D8X09_02185 PF00679 Elongation factor G C-terminus D8X09_02185 PF14492 Elongation Factor G, domain II D8X09_02185 PF03764 Elongation factor G, domain IV D8X09_02185 PF03144 Elongation factor Tu domain 2 D8X09_02190 PF00582 Universal stress protein family D8X09_02200 PF00155 Aminotransferase class I and II D8X09_02200 PF00392 Bacterial regulatory proteins, gntR family D8X09_02210 PF02308 MgtC family D8X09_02215 PF03471 Transporter associated domain D8X09_02215 PF03741 Integral membrane protein TerC family D8X09_02220 PF02515 CoA-transferase family III D8X09_02225 PF00378 Enoyl-CoA hydratase/isomerase D8X09_02230 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_02235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02235 PF03466 LysR substrate binding domain D8X09_02240 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_02250 PF00108 Thiolase, N-terminal domain D8X09_02250 PF02803 Thiolase, C-terminal domain D8X09_02270 PF03466 LysR substrate binding domain D8X09_02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02275 PF00313 'Cold-shock' DNA-binding domain D8X09_02285 PF07729 FCD domain D8X09_02285 PF00392 Bacterial regulatory proteins, gntR family D8X09_02290 PF00171 Aldehyde dehydrogenase family D8X09_02295 PF02667 Short chain fatty acid transporter D8X09_02300 PF00042 Globin D8X09_02300 PF00175 Oxidoreductase NAD-binding domain D8X09_02300 PF00970 Oxidoreductase FAD-binding domain D8X09_02305 PF01042 Endoribonuclease L-PSP D8X09_02310 PF03466 LysR substrate binding domain D8X09_02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02325 PF02515 CoA-transferase family III D8X09_02335 PF03466 LysR substrate binding domain D8X09_02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02340 PF02515 CoA-transferase family III D8X09_02350 PF01794 Ferric reductase like transmembrane component D8X09_02355 PF00174 Oxidoreductase molybdopterin binding domain D8X09_02360 PF13419 Haloacid dehalogenase-like hydrolase D8X09_02365 PF00849 RNA pseudouridylate synthase D8X09_02365 PF01479 S4 domain D8X09_02370 PF10150 Ribonuclease E/G family D8X09_02370 PF12111 Polyribonucleotide phosphorylase C terminal D8X09_02370 PF00575 S1 RNA binding domain D8X09_02390 PF01039 Carboxyl transferase domain D8X09_02390 PF17848 Acetyl-coA carboxylase zinc finger domain D8X09_02395 PF00290 Tryptophan synthase alpha chain D8X09_02400 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_02405 PF01546 Peptidase family M20/M25/M40 D8X09_02405 PF07687 Peptidase dimerisation domain D8X09_02410 PF04607 Region found in RelA / SpoT proteins D8X09_02410 PF02824 TGS domain D8X09_02410 PF13291 ACT domain D8X09_02415 PF06167 Glucose-regulated metallo-peptidase M90 D8X09_02425 PF01042 Endoribonuclease L-PSP D8X09_02430 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D8X09_02430 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D8X09_02435 PF11953 Domain of unknown function (DUF3470) D8X09_02435 PF00037 4Fe-4S binding domain D8X09_02440 PF00175 Oxidoreductase NAD-binding domain D8X09_02440 PF00970 Oxidoreductase FAD-binding domain D8X09_02450 PF04060 Putative Fe-S cluster D8X09_02455 PF00730 HhH-GPD superfamily base excision DNA repair protein D8X09_02455 PF00633 Helix-hairpin-helix motif D8X09_02455 PF10576 Iron-sulfur binding domain of endonuclease III D8X09_02460 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_02460 PF00005 ABC transporter D8X09_02465 PF00005 ABC transporter D8X09_02475 PF02653 Branched-chain amino acid transport system / permease component D8X09_02490 PF01063 Amino-transferase class IV D8X09_02495 PF00005 ABC transporter D8X09_02495 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_02510 PF02632 BioY family D8X09_02515 PF02361 Cobalt transport protein D8X09_02520 PF00005 ABC transporter D8X09_02525 PF01641 SelR domain D8X09_02530 PF04279 Intracellular septation protein A D8X09_02545 PF03120 NAD-dependent DNA ligase OB-fold domain D8X09_02545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D8X09_02545 PF00533 BRCA1 C Terminus (BRCT) domain D8X09_02545 PF12826 Helix-hairpin-helix motif D8X09_02545 PF01653 NAD-dependent DNA ligase adenylation domain D8X09_02555 PF02463 RecF/RecN/SMC N terminal domain D8X09_02555 PF06470 SMC proteins Flexible Hinge Domain D8X09_02560 PF07690 Major Facilitator Superfamily D8X09_02565 PF03167 Uracil DNA glycosylase superfamily D8X09_02570 PF00814 Glycoprotease family D8X09_02575 PF00072 Response regulator receiver domain D8X09_02575 PF00486 Transcriptional regulatory protein, C terminal D8X09_02585 PF00672 HAMP domain D8X09_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_02585 PF00512 His Kinase A (phospho-acceptor) domain D8X09_02590 PF00578 AhpC/TSA family D8X09_02595 PF02627 Carboxymuconolactone decarboxylase family D8X09_02615 PF00392 Bacterial regulatory proteins, gntR family D8X09_02615 PF07729 FCD domain D8X09_02630 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_02635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D8X09_02635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D8X09_02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02645 PF03466 LysR substrate binding domain D8X09_02655 PF00202 Aminotransferase class-III D8X09_02660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D8X09_02660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D8X09_02665 PF00764 Arginosuccinate synthase D8X09_02670 PF02705 K+ potassium transporter D8X09_02675 PF08521 Two-component sensor kinase N-terminal D8X09_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_02675 PF00512 His Kinase A (phospho-acceptor) domain D8X09_02680 PF00486 Transcriptional regulatory protein, C terminal D8X09_02680 PF00072 Response regulator receiver domain D8X09_02685 PF02472 Biopolymer transport protein ExbD/TolR D8X09_02690 PF01618 MotA/TolQ/ExbB proton channel family D8X09_02705 PF00216 Bacterial DNA-binding protein D8X09_02710 PF18331 PKHD-type hydroxylase C-terminal domain D8X09_02710 PF13640 2OG-Fe(II) oxygenase superfamily D8X09_02715 PF01053 Cys/Met metabolism PLP-dependent enzyme D8X09_02720 PF08032 RNA 2'-O ribose methyltransferase substrate binding D8X09_02720 PF00588 SpoU rRNA Methylase family D8X09_02725 PF17876 Cold shock domain D8X09_02725 PF08461 Ribonuclease R winged-helix domain D8X09_02725 PF08206 Ribonuclease B OB domain D8X09_02725 PF00773 RNB domain D8X09_02725 PF00575 S1 RNA binding domain D8X09_02745 PF13673 Acetyltransferase (GNAT) domain D8X09_02750 PF03547 Membrane transport protein D8X09_02755 PF04143 Sulphur transport D8X09_02760 PF01645 Conserved region in glutamate synthase D8X09_02770 PF13091 PLD-like domain D8X09_02770 PF13396 Phospholipase_D-nuclease N-terminal D8X09_02780 PF10017 Histidine-specific methyltransferase, SAM-dependent D8X09_02815 PF00072 Response regulator receiver domain D8X09_02820 PF00990 Diguanylate cyclase, GGDEF domain D8X09_02850 PF03466 LysR substrate binding domain D8X09_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_02860 PF00890 FAD binding domain D8X09_02880 PF00166 Chaperonin 10 Kd subunit D8X09_02885 PF00118 TCP-1/cpn60 chaperonin family D8X09_02890 PF03797 Autotransporter beta-domain D8X09_02890 PF03212 Pertactin D8X09_02895 PF03631 Virulence factor BrkB D8X09_02900 PF01219 Prokaryotic diacylglycerol kinase D8X09_02905 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_02910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D8X09_02915 PF00994 Probable molybdopterin binding domain D8X09_02915 PF02464 Competence-damaged protein D8X09_02915 PF18146 Damage-inducible protein CinA KH domain D8X09_02920 PF04608 Phosphatidylglycerophosphatase A D8X09_02925 PF02769 AIR synthase related protein, C-terminal domain D8X09_02925 PF00586 AIR synthase related protein, N-terminal domain D8X09_02930 PF01029 NusB family D8X09_02935 PF00885 6,7-dimethyl-8-ribityllumazine synthase D8X09_02940 PF00925 GTP cyclohydrolase II D8X09_02940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D8X09_02975 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_02980 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_02995 PF00448 SRP54-type protein, GTPase domain D8X09_02995 PF02881 SRP54-type protein, helical bundle domain D8X09_03005 PF01467 Cytidylyltransferase-like D8X09_03010 PF00037 4Fe-4S binding domain D8X09_03015 PF03594 Benzoate membrane transport protein D8X09_03030 PF01022 Bacterial regulatory protein, arsR family D8X09_03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_03045 PF03466 LysR substrate binding domain D8X09_03060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_03060 PF00005 ABC transporter D8X09_03065 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_03070 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_03080 PF00390 Malic enzyme, N-terminal domain D8X09_03080 PF03949 Malic enzyme, NAD binding domain D8X09_03080 PF01515 Phosphate acetyl/butaryl transferase D8X09_03085 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D8X09_03090 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_03095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_03095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_03095 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_03100 PF07729 FCD domain D8X09_03100 PF00392 Bacterial regulatory proteins, gntR family D8X09_03140 PF03466 LysR substrate binding domain D8X09_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_03155 PF04376 Arginine-tRNA-protein transferase, N terminus D8X09_03155 PF04377 Arginine-tRNA-protein transferase, C terminus D8X09_03160 PF01180 Dihydroorotate dehydrogenase D8X09_03170 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_03175 PF18807 Tripartite Tc toxins repeat D8X09_03175 PF05785 Rho-activating domain of cytotoxic necrotizing factor D8X09_03180 PF09339 IclR helix-turn-helix domain D8X09_03180 PF01614 Bacterial transcriptional regulator D8X09_03185 PF02464 Competence-damaged protein D8X09_03185 PF18146 Damage-inducible protein CinA KH domain D8X09_03185 PF00994 Probable molybdopterin binding domain D8X09_03205 PF00270 DEAD/DEAH box helicase D8X09_03205 PF00271 Helicase conserved C-terminal domain D8X09_03220 PF01063 Amino-transferase class IV D8X09_03235 PF00561 alpha/beta hydrolase fold D8X09_03240 PF01435 Peptidase family M48 D8X09_03240 PF13181 Tetratricopeptide repeat D8X09_03245 PF00483 Nucleotidyl transferase D8X09_03255 PF13609 Gram-negative porin D8X09_03280 PF05195 Aminopeptidase P, N-terminal domain D8X09_03280 PF00557 Metallopeptidase family M24 D8X09_03290 PF01494 FAD binding domain D8X09_03295 PF01207 Dihydrouridine synthase (Dus) D8X09_03300 PF02954 Bacterial regulatory protein, Fis family D8X09_03305 PF02142 MGS-like domain D8X09_03305 PF01808 AICARFT/IMPCHase bienzyme D8X09_03310 PF02075 Crossover junction endodeoxyribonuclease RuvC D8X09_03315 PF01330 RuvA N terminal domain D8X09_03315 PF07499 RuvA, C-terminal domain D8X09_03320 PF01370 NAD dependent epimerase/dehydratase family D8X09_03325 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_03330 PF05491 RuvB C-terminal winged helix domain D8X09_03330 PF17864 RuvB AAA lid domain D8X09_03330 PF05496 Holliday junction DNA helicase RuvB P-loop domain D8X09_03335 PF00570 HRDC domain D8X09_03335 PF00271 Helicase conserved C-terminal domain D8X09_03335 PF09382 RQC domain D8X09_03335 PF16124 RecQ zinc-binding D8X09_03335 PF00270 DEAD/DEAH box helicase D8X09_03350 PF00484 Carbonic anhydrase D8X09_03355 PF01425 Amidase D8X09_03360 PF13458 Periplasmic binding protein D8X09_03365 PF02653 Branched-chain amino acid transport system / permease component D8X09_03370 PF02653 Branched-chain amino acid transport system / permease component D8X09_03375 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_03375 PF00005 ABC transporter D8X09_03380 PF00005 ABC transporter D8X09_03385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D8X09_03385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D8X09_03395 PF03180 NLPA lipoprotein D8X09_03535 PF06791 Prophage tail length tape measure protein D8X09_03605 PF02586 SOS response associated peptidase (SRAP) D8X09_03615 PF00486 Transcriptional regulatory protein, C terminal D8X09_03615 PF00072 Response regulator receiver domain D8X09_03620 PF00293 NUDIX domain D8X09_03625 PF04073 Aminoacyl-tRNA editing domain D8X09_03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D8X09_03625 PF03129 Anticodon binding domain D8X09_03630 PF03061 Thioesterase superfamily D8X09_03635 PF01618 MotA/TolQ/ExbB proton channel family D8X09_03640 PF02472 Biopolymer transport protein ExbD/TolR D8X09_03650 PF07676 WD40-like Beta Propeller Repeat D8X09_03650 PF04052 TolB amino-terminal domain D8X09_03655 PF00691 OmpA family D8X09_03665 PF01032 FecCD transport family D8X09_03670 PF00005 ABC transporter D8X09_03675 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_03680 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_03705 PF07670 Nucleoside recognition D8X09_03710 PF02887 Pyruvate kinase, alpha/beta domain D8X09_03710 PF00224 Pyruvate kinase, barrel domain D8X09_03715 PF02595 Glycerate kinase family D8X09_03720 PF00398 Ribosomal RNA adenine dimethylase D8X09_03725 PF00639 PPIC-type PPIASE domain D8X09_03725 PF09312 SurA N-terminal domain D8X09_03730 PF04453 LPS transport system D D8X09_03735 PF01636 Phosphotransferase enzyme family D8X09_03740 PF00483 Nucleotidyl transferase D8X09_03750 PF01329 Pterin 4 alpha carbinolamine dehydratase D8X09_03775 PF00202 Aminotransferase class-III D8X09_03780 PF01425 Amidase D8X09_03785 PF00005 ABC transporter D8X09_03785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_03790 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_03795 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_03800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_03820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D8X09_03825 PF03435 Saccharopine dehydrogenase NADP binding domain D8X09_03825 PF16653 Saccharopine dehydrogenase C-terminal domain D8X09_03835 PF04264 YceI-like domain D8X09_03840 PF07715 TonB-dependent Receptor Plug Domain D8X09_03840 PF00593 TonB dependent receptor D8X09_03845 PF04773 FecR protein D8X09_03845 PF16220 Domain of unknown function (DUF4880) D8X09_03885 PF00696 Amino acid kinase family D8X09_03885 PF01472 PUA domain D8X09_03890 PF01018 GTP1/OBG D8X09_03890 PF01926 50S ribosome-binding GTPase D8X09_03895 PF01016 Ribosomal L27 protein D8X09_03900 PF00829 Ribosomal prokaryotic L21 protein D8X09_03910 PF00348 Polyprenyl synthetase D8X09_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_03920 PF03466 LysR substrate binding domain D8X09_03925 PF01968 Hydantoinase/oxoprolinase D8X09_03925 PF05378 Hydantoinase/oxoprolinase N-terminal region D8X09_03930 PF02538 Hydantoinase B/oxoprolinase D8X09_03935 PF01266 FAD dependent oxidoreductase D8X09_03945 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_03950 PF00171 Aldehyde dehydrogenase family D8X09_03955 PF02794 RTX toxin acyltransferase family D8X09_03965 PF03497 Anthrax toxin LF subunit D8X09_03965 PF02382 N-terminal domain in RTX protein D8X09_03965 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D8X09_03970 PF03412 Peptidase C39 family D8X09_03970 PF00005 ABC transporter D8X09_03970 PF00664 ABC transporter transmembrane region D8X09_03975 PF13533 Biotin-lipoyl like D8X09_03980 PF02321 Outer membrane efflux protein D8X09_03990 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_04000 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_04005 PF00005 ABC transporter D8X09_04010 PF01063 Amino-transferase class IV D8X09_04030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_04030 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_04030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_04035 PF00392 Bacterial regulatory proteins, gntR family D8X09_04035 PF07729 FCD domain D8X09_04045 PF00392 Bacterial regulatory proteins, gntR family D8X09_04045 PF07729 FCD domain D8X09_04050 PF00107 Zinc-binding dehydrogenase D8X09_04050 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_04055 PF13193 AMP-binding enzyme C-terminal domain D8X09_04055 PF00501 AMP-binding enzyme D8X09_04065 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_04070 PF00005 ABC transporter D8X09_04075 PF09084 NMT1/THI5 like D8X09_04085 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_04085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_04085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_04105 PF01433 Peptidase family M1 domain D8X09_04105 PF11940 Domain of unknown function (DUF3458) Ig-like fold D8X09_04105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D8X09_04110 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D8X09_04125 PF02542 YgbB family D8X09_04130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D8X09_04135 PF02559 CarD-like/TRCF domain D8X09_04135 PF00271 Helicase conserved C-terminal domain D8X09_04135 PF17757 UvrB interaction domain D8X09_04135 PF03461 TRCF domain D8X09_04135 PF00270 DEAD/DEAH box helicase D8X09_04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_04145 PF03466 LysR substrate binding domain D8X09_04150 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_04155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_04155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_04155 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_04170 PF07715 TonB-dependent Receptor Plug Domain D8X09_04170 PF00593 TonB dependent receptor D8X09_04175 PF07715 TonB-dependent Receptor Plug Domain D8X09_04175 PF00593 TonB dependent receptor D8X09_04185 PF00361 Proton-conducting membrane transporter D8X09_04190 PF00361 Proton-conducting membrane transporter D8X09_04190 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D8X09_04195 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D8X09_04195 PF00361 Proton-conducting membrane transporter D8X09_04200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D8X09_04205 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D8X09_04210 PF12838 4Fe-4S dicluster domain D8X09_04215 PF00146 NADH dehydrogenase D8X09_04220 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D8X09_04220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D8X09_04220 PF00384 Molybdopterin oxidoreductase D8X09_04225 PF10531 SLBB domain D8X09_04225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D8X09_04225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D8X09_04235 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D8X09_04240 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D8X09_04245 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D8X09_04250 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D8X09_04255 PF13609 Gram-negative porin D8X09_04285 PF01569 PAP2 superfamily D8X09_04295 PF00781 Diacylglycerol kinase catalytic domain D8X09_04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_04300 PF03466 LysR substrate binding domain D8X09_04305 PF02028 BCCT, betaine/carnitine/choline family transporter D8X09_04315 PF01638 HxlR-like helix-turn-helix D8X09_04320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D8X09_04325 PF00873 AcrB/AcrD/AcrF family D8X09_04330 PF02321 Outer membrane efflux protein D8X09_04340 PF00127 Copper binding proteins, plastocyanin/azurin family D8X09_04350 PF01968 Hydantoinase/oxoprolinase D8X09_04350 PF05378 Hydantoinase/oxoprolinase N-terminal region D8X09_04360 PF01266 FAD dependent oxidoreductase D8X09_04365 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_04380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D8X09_04385 PF01053 Cys/Met metabolism PLP-dependent enzyme D8X09_04390 PF03466 LysR substrate binding domain D8X09_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_04405 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_04420 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_04425 PF05034 Methylaspartate ammonia-lyase N-terminus D8X09_04425 PF07476 Methylaspartate ammonia-lyase C-terminus D8X09_04435 PF02028 BCCT, betaine/carnitine/choline family transporter D8X09_04445 PF03840 Preprotein translocase SecG subunit D8X09_04450 PF00121 Triosephosphate isomerase D8X09_04455 PF08659 KR domain D8X09_04455 PF16197 Ketoacyl-synthetase C-terminal extension D8X09_04455 PF02801 Beta-ketoacyl synthase, C-terminal domain D8X09_04455 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_04455 PF14765 Polyketide synthase dehydratase D8X09_04455 PF00698 Acyl transferase domain D8X09_04455 PF00109 Beta-ketoacyl synthase, N-terminal domain D8X09_04455 PF08990 Erythronolide synthase docking D8X09_04455 PF00550 Phosphopantetheine attachment site D8X09_04470 PF13291 ACT domain D8X09_04470 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_04485 PF01138 3' exoribonuclease family, domain 1 D8X09_04485 PF00575 S1 RNA binding domain D8X09_04485 PF03725 3' exoribonuclease family, domain 2 D8X09_04485 PF00013 KH domain D8X09_04485 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D8X09_04490 PF00312 Ribosomal protein S15 D8X09_04505 PF01066 CDP-alcohol phosphatidyltransferase D8X09_04510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D8X09_04510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D8X09_04515 PF10369 Small subunit of acetolactate synthase D8X09_04520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_04520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_04520 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_04535 PF00664 ABC transporter transmembrane region D8X09_04535 PF00005 ABC transporter D8X09_04540 PF05724 Thiopurine S-methyltransferase (TPMT) D8X09_04560 PF07317 Flagellar regulator YcgR D8X09_04560 PF07238 PilZ domain D8X09_04580 PF01966 HD domain D8X09_04590 PF00364 Biotin-requiring enzyme D8X09_04595 PF00364 Biotin-requiring enzyme D8X09_04595 PF00682 HMGL-like D8X09_04595 PF02436 Conserved carboxylase domain D8X09_04615 PF00392 Bacterial regulatory proteins, gntR family D8X09_04615 PF07702 UTRA domain D8X09_04620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D8X09_04620 PF00289 Biotin carboxylase, N-terminal domain D8X09_04620 PF02785 Biotin carboxylase C-terminal domain D8X09_04670 PF00005 ABC transporter D8X09_04670 PF00664 ABC transporter transmembrane region D8X09_04675 PF00248 Aldo/keto reductase family D8X09_04680 PF00248 Aldo/keto reductase family D8X09_04695 PF00149 Calcineurin-like phosphoesterase D8X09_04700 PF17092 Penicillin-binding protein OB-like domain D8X09_04700 PF00912 Transglycosylase D8X09_04700 PF00905 Penicillin binding protein transpeptidase domain D8X09_04705 PF00326 Prolyl oligopeptidase family D8X09_04720 PF11798 IMS family HHH motif D8X09_04720 PF00817 impB/mucB/samB family D8X09_04720 PF11799 impB/mucB/samB family C-terminal domain D8X09_04730 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_04735 PF03466 LysR substrate binding domain D8X09_04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_04765 PF07690 Major Facilitator Superfamily D8X09_04770 PF13419 Haloacid dehalogenase-like hydrolase D8X09_04780 PF00691 OmpA family D8X09_04785 PF03989 DNA gyrase C-terminal domain, beta-propeller D8X09_04785 PF00521 DNA gyrase/topoisomerase IV, subunit A D8X09_04790 PF00266 Aminotransferase class-V D8X09_04795 PF01817 Chorismate mutase type II D8X09_04795 PF01842 ACT domain D8X09_04795 PF00800 Prephenate dehydratase D8X09_04800 PF02153 Prephenate dehydrogenase D8X09_04805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D8X09_04810 PF02224 Cytidylate kinase D8X09_04815 PF00575 S1 RNA binding domain D8X09_04820 PF00216 Bacterial DNA-binding protein D8X09_04830 PF18073 Rubredoxin metal binding domain D8X09_04835 PF00294 pfkB family carbohydrate kinase D8X09_04840 PF01370 NAD dependent epimerase/dehydratase family D8X09_04845 PF10531 SLBB domain D8X09_04855 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_04860 PF13406 Transglycosylase SLT domain D8X09_04865 PF00850 Histone deacetylase domain D8X09_04870 PF01012 Electron transfer flavoprotein domain D8X09_04875 PF01012 Electron transfer flavoprotein domain D8X09_04875 PF00766 Electron transfer flavoprotein FAD-binding domain D8X09_04880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_04880 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_04880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_04880 PF12806 Acetyl-CoA dehydrogenase C-terminal like D8X09_04885 PF00578 AhpC/TSA family D8X09_04885 PF10417 C-terminal domain of 1-Cys peroxiredoxin D8X09_04905 PF12857 TOBE-like domain D8X09_04905 PF17850 CysA C-terminal regulatory domain D8X09_04905 PF00005 ABC transporter D8X09_04915 PF01507 Phosphoadenosine phosphosulfate reductase family D8X09_04925 PF04055 Radical SAM superfamily D8X09_04940 PF01245 Ribosomal protein L19 D8X09_04945 PF00293 NUDIX domain D8X09_04955 PF00248 Aldo/keto reductase family D8X09_04970 PF04345 Chorismate lyase D8X09_04975 PF01479 S4 domain D8X09_04975 PF00849 RNA pseudouridylate synthase D8X09_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_04980 PF03466 LysR substrate binding domain D8X09_04990 PF00873 AcrB/AcrD/AcrF family D8X09_04995 PF02321 Outer membrane efflux protein D8X09_05005 PF02630 SCO1/SenC D8X09_05010 PF01432 Peptidase family M3 D8X09_05015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D8X09_05015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D8X09_05020 PF00196 Bacterial regulatory proteins, luxR family D8X09_05020 PF00072 Response regulator receiver domain D8X09_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_05025 PF00989 PAS fold D8X09_05025 PF00512 His Kinase A (phospho-acceptor) domain D8X09_05030 PF17831 Pyruvate dehydrogenase E1 component middle domain D8X09_05030 PF00456 Transketolase, thiamine diphosphate binding domain D8X09_05035 PF00364 Biotin-requiring enzyme D8X09_05035 PF02817 e3 binding domain D8X09_05035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D8X09_05040 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_05040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D8X09_05045 PF00700 Bacterial flagellin C-terminal helical region D8X09_05045 PF00669 Bacterial flagellin N-terminal helical region D8X09_05055 PF04452 RNA methyltransferase D8X09_05060 PF00456 Transketolase, thiamine diphosphate binding domain D8X09_05060 PF02780 Transketolase, C-terminal domain D8X09_05060 PF02779 Transketolase, pyrimidine binding domain D8X09_05065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D8X09_05065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D8X09_05070 PF00162 Phosphoglycerate kinase D8X09_05080 PF00871 Acetokinase family D8X09_05085 PF01515 Phosphate acetyl/butaryl transferase D8X09_05090 PF11339 Protein of unknown function (DUF3141) D8X09_05095 PF14834 Glutathione S-transferase, C-terminal domain D8X09_05095 PF02798 Glutathione S-transferase, N-terminal domain D8X09_05115 PF00226 DnaJ domain D8X09_05115 PF01556 DnaJ C terminal domain D8X09_05125 PF03591 AzlC protein D8X09_05135 PF00994 Probable molybdopterin binding domain D8X09_05145 PF08525 Opacity-associated protein A N-terminal motif D8X09_05145 PF01476 LysM domain D8X09_05145 PF01551 Peptidase family M23 D8X09_05155 PF01176 Translation initiation factor 1A / IF-1 D8X09_05165 PF04545 Sigma-70, region 4 D8X09_05165 PF04542 Sigma-70 region 2 D8X09_05165 PF04539 Sigma-70 region 3 D8X09_05170 PF05247 Flagellar transcriptional activator (FlhD) D8X09_05175 PF05280 Flagellar transcriptional activator (FlhC) D8X09_05180 PF01618 MotA/TolQ/ExbB proton channel family D8X09_05185 PF00691 OmpA family D8X09_05185 PF13677 Membrane MotB of proton-channel complex MotA/MotB D8X09_05190 PF00072 Response regulator receiver domain D8X09_05195 PF01627 Hpt domain D8X09_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_05195 PF02895 Signal transducing histidine kinase, homodimeric domain D8X09_05195 PF01584 CheW-like domain D8X09_05195 PF09078 CheY binding D8X09_05200 PF01584 CheW-like domain D8X09_05205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D8X09_05205 PF02203 Tar ligand binding domain homologue D8X09_05205 PF00672 HAMP domain D8X09_05215 PF00072 Response regulator receiver domain D8X09_05215 PF01339 CheB methylesterase D8X09_05220 PF00072 Response regulator receiver domain D8X09_05225 PF04344 Chemotaxis phosphatase, CheZ D8X09_05250 PF00248 Aldo/keto reductase family D8X09_05255 PF00795 Carbon-nitrogen hydrolase D8X09_05260 PF00571 CBS domain D8X09_05260 PF03471 Transporter associated domain D8X09_05265 PF02130 Uncharacterized protein family UPF0054 D8X09_05270 PF02562 PhoH-like protein D8X09_05275 PF04055 Radical SAM superfamily D8X09_05275 PF00919 Uncharacterized protein family UPF0004 D8X09_05275 PF01938 TRAM domain D8X09_05290 PF07549 SecD/SecF GG Motif D8X09_05290 PF02355 Protein export membrane protein D8X09_05295 PF07549 SecD/SecF GG Motif D8X09_05295 PF13721 SecD export protein N-terminal TM region D8X09_05295 PF02355 Protein export membrane protein D8X09_05300 PF02699 Preprotein translocase subunit D8X09_05305 PF01702 Queuine tRNA-ribosyltransferase D8X09_05310 PF02547 Queuosine biosynthesis protein D8X09_05315 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D8X09_05330 PF03212 Pertactin D8X09_05330 PF03797 Autotransporter beta-domain D8X09_05335 PF10414 Sirohaem synthase dimerisation region D8X09_05335 PF14824 Sirohaem biosynthesis protein central D8X09_05335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D8X09_05360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D8X09_05365 PF01464 Transglycosylase SLT domain D8X09_05365 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D8X09_05375 PF00155 Aminotransferase class I and II D8X09_05385 PF01515 Phosphate acetyl/butaryl transferase D8X09_05385 PF03949 Malic enzyme, NAD binding domain D8X09_05385 PF00390 Malic enzyme, N-terminal domain D8X09_05395 PF01337 Barstar (barnase inhibitor) D8X09_05410 PF00005 ABC transporter D8X09_05415 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_05420 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_05425 PF12849 PBP superfamily domain D8X09_05430 PF02503 Polyphosphate kinase middle domain D8X09_05430 PF13090 Polyphosphate kinase C-terminal domain 2 D8X09_05430 PF13089 Polyphosphate kinase N-terminal domain D8X09_05430 PF17941 Polyphosphate kinase C-terminal domain 1 D8X09_05435 PF02541 Ppx/GppA phosphatase family D8X09_05445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D8X09_05445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D8X09_05445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D8X09_05445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D8X09_05450 PF00809 Pterin binding enzyme D8X09_05455 PF01434 Peptidase family M41 D8X09_05455 PF06480 FtsH Extracellular D8X09_05455 PF17862 AAA+ lid domain D8X09_05455 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_05460 PF01728 FtsJ-like methyltransferase D8X09_05465 PF01985 CRS1 / YhbY (CRM) domain D8X09_05490 PF01636 Phosphotransferase enzyme family D8X09_05495 PF01207 Dihydrouridine synthase (Dus) D8X09_05510 PF03631 Virulence factor BrkB D8X09_05520 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D8X09_05525 PF00486 Transcriptional regulatory protein, C terminal D8X09_05525 PF00072 Response regulator receiver domain D8X09_05530 PF00512 His Kinase A (phospho-acceptor) domain D8X09_05530 PF07689 KaiB domain D8X09_05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_05540 PF00005 ABC transporter D8X09_05540 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_05560 PF00005 ABC transporter D8X09_05565 PF00501 AMP-binding enzyme D8X09_05570 PF00440 Bacterial regulatory proteins, tetR family D8X09_05570 PF17932 Tetracyclin repressor-like, C-terminal domain D8X09_05580 PF01336 OB-fold nucleic acid binding domain D8X09_05580 PF00152 tRNA synthetases class II (D, K and N) D8X09_05585 PF00106 short chain dehydrogenase D8X09_05595 PF17768 RecJ OB domain D8X09_05595 PF01368 DHH family D8X09_05595 PF02272 DHHA1 domain D8X09_05605 PF12704 MacB-like periplasmic core domain D8X09_05605 PF02687 FtsX-like permease family D8X09_05610 PF00005 ABC transporter D8X09_05615 PF01026 TatD related DNase D8X09_05640 PF13567 Domain of unknown function (DUF4131) D8X09_05640 PF00753 Metallo-beta-lactamase superfamily D8X09_05640 PF03772 Competence protein D8X09_05650 PF02811 PHP domain D8X09_05655 PF01272 Transcription elongation factor, GreA/GreB, C-term D8X09_05655 PF03449 Transcription elongation factor, N-terminal D8X09_05670 PF16970 Type-1 fimbrial protein, A D8X09_05675 PF03949 Malic enzyme, NAD binding domain D8X09_05675 PF01515 Phosphate acetyl/butaryl transferase D8X09_05675 PF00390 Malic enzyme, N-terminal domain D8X09_05680 PF00456 Transketolase, thiamine diphosphate binding domain D8X09_05680 PF17831 Pyruvate dehydrogenase E1 component middle domain D8X09_05685 PF01037 Lrp/AsnC ligand binding domain D8X09_05695 PF16078 2-oxoglutarate dehydrogenase N-terminus D8X09_05695 PF00676 Dehydrogenase E1 component D8X09_05695 PF16870 2-oxoglutarate dehydrogenase C-terminal D8X09_05695 PF02779 Transketolase, pyrimidine binding domain D8X09_05700 PF02817 e3 binding domain D8X09_05700 PF00364 Biotin-requiring enzyme D8X09_05700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D8X09_05705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D8X09_05705 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_05710 PF03969 AFG1-like ATPase D8X09_05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_05720 PF03466 LysR substrate binding domain D8X09_05730 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_05755 PF00579 tRNA synthetases class I (W and Y) D8X09_05760 PF00575 S1 RNA binding domain D8X09_05760 PF17674 HHH domain D8X09_05760 PF16921 Tex protein YqgF-like domain D8X09_05760 PF09371 Tex-like protein N-terminal domain D8X09_05765 PF04851 Type III restriction enzyme, res subunit D8X09_05765 PF13307 Helicase C-terminal domain D8X09_05770 PF13525 Outer membrane lipoprotein D8X09_05775 PF01479 S4 domain D8X09_05775 PF00849 RNA pseudouridylate synthase D8X09_05785 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D8X09_05790 PF00106 short chain dehydrogenase D8X09_05795 PF05233 PHB accumulation regulatory domain D8X09_05795 PF07879 PHB/PHA accumulation regulator DNA-binding domain D8X09_05800 PF10634 Fe2+ transport protein D8X09_05810 PF03239 Iron permease FTR1 family D8X09_05820 PF02567 Phenazine biosynthesis-like protein D8X09_05840 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_05845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D8X09_05845 PF13378 Enolase C-terminal domain-like D8X09_05850 PF03466 LysR substrate binding domain D8X09_05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_05860 PF07690 Major Facilitator Superfamily D8X09_05875 PF17676 LD-carboxypeptidase C-terminal domain D8X09_05875 PF02016 LD-carboxypeptidase N-terminal domain D8X09_05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_05885 PF03466 LysR substrate binding domain D8X09_05890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D8X09_05890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D8X09_05895 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_05920 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D8X09_05945 PF00005 ABC transporter D8X09_05950 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_05955 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_05960 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_05995 PF02627 Carboxymuconolactone decarboxylase family D8X09_06000 PF04542 Sigma-70 region 2 D8X09_06000 PF08281 Sigma-70, region 4 D8X09_06000 PF12680 SnoaL-like domain D8X09_06010 PF12843 Putative quorum-sensing-regulated virulence factor D8X09_06015 PF00293 NUDIX domain D8X09_06030 PF00027 Cyclic nucleotide-binding domain D8X09_06030 PF13545 Crp-like helix-turn-helix domain D8X09_06035 PF07724 AAA domain (Cdc48 subfamily) D8X09_06035 PF17871 AAA lid domain D8X09_06035 PF02861 Clp amino terminal domain, pathogenicity island component D8X09_06035 PF10431 C-terminal, D2-small domain, of ClpB protein D8X09_06035 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_06065 PF03212 Pertactin D8X09_06065 PF03797 Autotransporter beta-domain D8X09_06080 PF09370 Phosphoenolpyruvate hydrolase-like D8X09_06090 PF03466 LysR substrate binding domain D8X09_06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_06095 PF07969 Amidohydrolase family D8X09_06105 PF00175 Oxidoreductase NAD-binding domain D8X09_06105 PF00258 Flavodoxin D8X09_06105 PF00667 FAD binding domain D8X09_06110 PF02424 ApbE family D8X09_06130 PF00005 ABC transporter D8X09_06135 PF01061 ABC-2 type transporter D8X09_06145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D8X09_06150 PF01593 Flavin containing amine oxidoreductase D8X09_06150 PF01593 Flavin containing amine oxidoreductase D8X09_06165 PF01168 Alanine racemase, N-terminal domain D8X09_06165 PF00842 Alanine racemase, C-terminal domain D8X09_06185 PF04545 Sigma-70, region 4 D8X09_06185 PF04542 Sigma-70 region 2 D8X09_06190 PF00092 von Willebrand factor type A domain D8X09_06190 PF12450 von Willebrand factor D8X09_06190 PF12034 Domain of unknown function (DUF3520) D8X09_06195 PF18073 Rubredoxin metal binding domain D8X09_06210 PF01554 MatE D8X09_06220 PF01197 Ribosomal protein L31 D8X09_06225 PF03301 Tryptophan 2,3-dioxygenase D8X09_06230 PF04199 Putative cyclase D8X09_06235 PF04002 RadC-like JAB domain D8X09_06240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D8X09_06245 PF02401 LytB protein D8X09_06250 PF02798 Glutathione S-transferase, N-terminal domain D8X09_06250 PF14497 Glutathione S-transferase, C-terminal domain D8X09_06270 PF07683 Cobalamin synthesis protein cobW C-terminal domain D8X09_06270 PF02492 CobW/HypB/UreG, nucleotide-binding domain D8X09_06275 PF00881 Nitroreductase family D8X09_06280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_06280 PF03466 LysR substrate binding domain D8X09_06290 PF04079 Segregation and condensation complex subunit ScpB D8X09_06295 PF00849 RNA pseudouridylate synthase D8X09_06295 PF01479 S4 domain D8X09_06300 PF17384 RimP C-terminal SH3 domain D8X09_06300 PF02576 RimP N-terminal domain D8X09_06305 PF08529 NusA N-terminal domain D8X09_06305 PF13184 NusA-like KH domain D8X09_06310 PF04760 Translation initiation factor IF-2, N-terminal region D8X09_06310 PF08364 Bacterial translation initiation factor IF-2 associated region D8X09_06310 PF11987 Translation-initiation factor 2 D8X09_06310 PF00009 Elongation factor Tu GTP binding domain D8X09_06315 PF02033 Ribosome-binding factor A D8X09_06320 PF01509 TruB family pseudouridylate synthase (N terminal domain) D8X09_06320 PF16198 tRNA pseudouridylate synthase B C-terminal domain D8X09_06340 PF03641 Possible lysine decarboxylase D8X09_06345 PF01367 5'-3' exonuclease, C-terminal SAM fold D8X09_06345 PF01612 3'-5' exonuclease D8X09_06345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D8X09_06345 PF00476 DNA polymerase family A D8X09_06355 PF01738 Dienelactone hydrolase family D8X09_06360 PF02690 Na+/Pi-cotransporter D8X09_06365 PF03313 Serine dehydratase alpha chain D8X09_06365 PF03315 Serine dehydratase beta chain D8X09_06370 PF02677 Epoxyqueuosine reductase QueH D8X09_06375 PF08335 GlnD PII-uridylyltransferase D8X09_06375 PF03710 Glutamate-ammonia ligase adenylyltransferase D8X09_06385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D8X09_06385 PF07497 Rho termination factor, RNA-binding domain D8X09_06385 PF07498 Rho termination factor, N-terminal domain D8X09_06390 PF00085 Thioredoxin D8X09_06395 PF00986 DNA gyrase B subunit, carboxyl terminus D8X09_06395 PF01751 Toprim domain D8X09_06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_06395 PF00204 DNA gyrase B D8X09_06405 PF00521 DNA gyrase/topoisomerase IV, subunit A D8X09_06410 PF04235 Protein of unknown function (DUF418) D8X09_06435 PF01177 Asp/Glu/Hydantoin racemase D8X09_06440 PF00005 ABC transporter D8X09_06445 PF00005 ABC transporter D8X09_06445 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_06450 PF11862 Domain of unknown function (DUF3382) D8X09_06450 PF02653 Branched-chain amino acid transport system / permease component D8X09_06455 PF02653 Branched-chain amino acid transport system / permease component D8X09_06460 PF13458 Periplasmic binding protein D8X09_06470 PF02592 Putative vitamin uptake transporter D8X09_06475 PF14748 Pyrroline-5-carboxylate reductase dimerisation D8X09_06475 PF03807 NADP oxidoreductase coenzyme F420-dependent D8X09_06480 PF13416 Bacterial extracellular solute-binding protein D8X09_06485 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_06490 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_06495 PF17912 MalK OB fold domain D8X09_06495 PF00005 ABC transporter D8X09_06500 PF13458 Periplasmic binding protein D8X09_06520 PF04241 Protein of unknown function (DUF423) D8X09_06535 PF03180 NLPA lipoprotein D8X09_06540 PF01070 FMN-dependent dehydrogenase D8X09_06545 PF02666 Phosphatidylserine decarboxylase D8X09_06560 PF03099 Biotin/lipoate A/B protein ligase family D8X09_06560 PF10437 Bacterial lipoate protein ligase C-terminus D8X09_06575 PF00043 Glutathione S-transferase, C-terminal domain D8X09_06575 PF02798 Glutathione S-transferase, N-terminal domain D8X09_06580 PF00255 Glutathione peroxidase D8X09_06600 PF02515 CoA-transferase family III D8X09_06605 PF03960 ArsC family D8X09_06610 PF00578 AhpC/TSA family D8X09_06630 PF07681 DoxX D8X09_06645 PF00248 Aldo/keto reductase family D8X09_06650 PF00582 Universal stress protein family D8X09_06665 PF00392 Bacterial regulatory proteins, gntR family D8X09_06665 PF00155 Aminotransferase class I and II D8X09_06670 PF01168 Alanine racemase, N-terminal domain D8X09_06675 PF08543 Phosphomethylpyrimidine kinase D8X09_06685 PF00128 Alpha amylase, catalytic domain D8X09_06695 PF11941 Domain of unknown function (DUF3459) D8X09_06695 PF00128 Alpha amylase, catalytic domain D8X09_06695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D8X09_06700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D8X09_06700 PF00128 Alpha amylase, catalytic domain D8X09_06705 PF02806 Alpha amylase, C-terminal all-beta domain D8X09_06705 PF00128 Alpha amylase, catalytic domain D8X09_06705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D8X09_06710 PF16657 Maltogenic Amylase, C-terminal domain D8X09_06710 PF00128 Alpha amylase, catalytic domain D8X09_06755 PF13091 PLD-like domain D8X09_06760 PF03372 Endonuclease/Exonuclease/phosphatase family D8X09_06770 PF03551 Transcriptional regulator PadR-like family D8X09_06780 PF12951 Passenger-associated-transport-repeat D8X09_06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_06790 PF03466 LysR substrate binding domain D8X09_06800 PF03328 HpcH/HpaI aldolase/citrate lyase family D8X09_06805 PF07729 FCD domain D8X09_06805 PF00392 Bacterial regulatory proteins, gntR family D8X09_06815 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_06825 PF02515 CoA-transferase family III D8X09_06830 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_06835 PF00356 Bacterial regulatory proteins, lacI family D8X09_06840 PF00694 Aconitase C-terminal domain D8X09_06850 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_06855 PF13378 Enolase C-terminal domain-like D8X09_06860 PF08546 Ketopantoate reductase PanE/ApbA C terminal D8X09_06860 PF02558 Ketopantoate reductase PanE/ApbA D8X09_06870 PF00005 ABC transporter D8X09_06880 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_06890 PF01312 FlhB HrpN YscU SpaS Family D8X09_06910 PF04316 Anti-sigma-28 factor, FlgM D8X09_06920 PF00460 Flagella basal body rod protein D8X09_06925 PF00460 Flagella basal body rod protein D8X09_06925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D8X09_06930 PF03963 Flagellar hook capping protein - N-terminal region D8X09_06930 PF13861 FlgD Tudor-like domain D8X09_06930 PF13860 FlgD Ig-like domain D8X09_06935 PF00460 Flagella basal body rod protein D8X09_06935 PF07559 Flagellar basal body protein FlaE D8X09_06935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D8X09_06940 PF00460 Flagella basal body rod protein D8X09_06940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D8X09_06945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D8X09_06945 PF00460 Flagella basal body rod protein D8X09_06950 PF02107 Flagellar L-ring protein D8X09_06955 PF02119 Flagellar P-ring protein D8X09_06960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D8X09_06960 PF10135 Rod binding protein D8X09_06965 PF00460 Flagella basal body rod protein D8X09_06965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D8X09_06970 PF00669 Bacterial flagellin N-terminal helical region D8X09_06975 PF00672 HAMP domain D8X09_06975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D8X09_06975 PF02203 Tar ligand binding domain homologue D8X09_06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D8X09_06980 PF00672 HAMP domain D8X09_06980 PF02203 Tar ligand binding domain homologue D8X09_06985 PF08447 PAS fold D8X09_06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D8X09_06995 PF01311 Bacterial export proteins, family 1 D8X09_07000 PF01313 Bacterial export proteins, family 3 D8X09_07005 PF00813 FliP family D8X09_07010 PF04347 Flagellar biosynthesis protein, FliO D8X09_07015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D8X09_07015 PF16973 Flagellar motor switch protein FliN N-terminal D8X09_07020 PF02154 Flagellar motor switch protein FliM D8X09_07020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D8X09_07025 PF03748 Flagellar basal body-associated protein FliL D8X09_07050 PF18269 T3SS EscN ATPase C-terminal domain D8X09_07050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D8X09_07060 PF14842 FliG N-terminal domain D8X09_07060 PF14841 FliG middle domain D8X09_07060 PF01706 FliG C-terminal domain D8X09_07065 PF01514 Secretory protein of YscJ/FliF family D8X09_07065 PF08345 Flagellar M-ring protein C-terminal D8X09_07070 PF02049 Flagellar hook-basal body complex protein FliE D8X09_07080 PF01312 FlhB HrpN YscU SpaS Family D8X09_07100 PF02561 Flagellar protein FliS D8X09_07105 PF07195 Flagellar hook-associated protein 2 C-terminus D8X09_07105 PF07196 Flagellin hook IN motif D8X09_07105 PF02465 Flagellar hook-associated protein 2 N-terminus D8X09_07115 PF02875 Mur ligase family, glutamate ligase domain D8X09_07115 PF08245 Mur ligase middle domain D8X09_07130 PF00156 Phosphoribosyl transferase domain D8X09_07145 PF08335 GlnD PII-uridylyltransferase D8X09_07145 PF01909 Nucleotidyltransferase domain D8X09_07145 PF01966 HD domain D8X09_07150 PF00557 Metallopeptidase family M24 D8X09_07155 PF00318 Ribosomal protein S2 D8X09_07160 PF00889 Elongation factor TS D8X09_07165 PF00696 Amino acid kinase family D8X09_07170 PF01765 Ribosome recycling factor D8X09_07175 PF01255 Putative undecaprenyl diphosphate synthase D8X09_07185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D8X09_07185 PF13288 DXP reductoisomerase C-terminal domain D8X09_07185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D8X09_07190 PF17820 PDZ domain D8X09_07190 PF02163 Peptidase family M50 D8X09_07195 PF07244 Surface antigen variable number repeat D8X09_07195 PF01103 Surface antigen D8X09_07200 PF03938 Outer membrane protein (OmpH-like) D8X09_07205 PF00132 Bacterial transferase hexapeptide (six repeats) D8X09_07205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D8X09_07210 PF07977 FabA-like domain D8X09_07215 PF00132 Bacterial transferase hexapeptide (six repeats) D8X09_07215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D8X09_07220 PF02684 Lipid-A-disaccharide synthetase D8X09_07225 PF01351 Ribonuclease HII D8X09_07230 PF08032 RNA 2'-O ribose methyltransferase substrate binding D8X09_07230 PF00588 SpoU rRNA Methylase family D8X09_07235 PF03618 Kinase/pyrophosphorylase D8X09_07240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D8X09_07240 PF00391 PEP-utilising enzyme, mobile domain D8X09_07240 PF02896 PEP-utilising enzyme, TIM barrel domain D8X09_07245 PF00958 GMP synthase C terminal domain D8X09_07245 PF00117 Glutamine amidotransferase class-I D8X09_07260 PF01145 SPFH domain / Band 7 family D8X09_07260 PF16200 C-terminal region of band_7 D8X09_07265 PF08448 PAS fold D8X09_07265 PF00990 Diguanylate cyclase, GGDEF domain D8X09_07270 PF01668 SmpB protein D8X09_07280 PF03364 Polyketide cyclase / dehydrase and lipid transport D8X09_07285 PF03658 RnfH family Ubiquitin D8X09_07290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_07290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_07290 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_07295 PF00378 Enoyl-CoA hydratase/isomerase D8X09_07300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D8X09_07300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D8X09_07325 PF00923 Transaldolase/Fructose-6-phosphate aldolase D8X09_07330 PF00117 Glutamine amidotransferase class-I D8X09_07330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D8X09_07335 PF02142 MGS-like domain D8X09_07335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D8X09_07335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D8X09_07345 PF00300 Histidine phosphatase superfamily (branch 1) D8X09_07355 PF08402 TOBE domain D8X09_07355 PF00005 ABC transporter D8X09_07360 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_07375 PF08448 PAS fold D8X09_07375 PF00990 Diguanylate cyclase, GGDEF domain D8X09_07375 PF00563 EAL domain D8X09_07375 PF08447 PAS fold D8X09_07380 PF01264 Chorismate synthase D8X09_07385 PF01435 Peptidase family M48 D8X09_07390 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D8X09_07395 PF03453 MoeA N-terminal region (domain I and II) D8X09_07395 PF00994 Probable molybdopterin binding domain D8X09_07395 PF03454 MoeA C-terminal region (domain IV) D8X09_07400 PF12804 MobA-like NTP transferase domain D8X09_07405 PF10609 NUBPL iron-transfer P-loop NTPase D8X09_07435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D8X09_07435 PF00384 Molybdopterin oxidoreductase D8X09_07435 PF01568 Molydopterin dinucleotide binding domain D8X09_07470 PF00005 ABC transporter D8X09_07475 PF12849 PBP superfamily domain D8X09_07480 PF00330 Aconitase family (aconitate hydratase) D8X09_07485 PF00694 Aconitase C-terminal domain D8X09_07490 PF00180 Isocitrate/isopropylmalate dehydrogenase D8X09_07495 PF02774 Semialdehyde dehydrogenase, dimerisation domain D8X09_07495 PF01118 Semialdehyde dehydrogenase, NAD binding domain D8X09_07505 PF01416 tRNA pseudouridine synthase D8X09_07510 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_07520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_07525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D8X09_07540 PF03883 Peroxide stress protein YaaA D8X09_07560 PF00990 Diguanylate cyclase, GGDEF domain D8X09_07560 PF17158 Membrane-associated sensor, integral membrane domain D8X09_07580 PF00196 Bacterial regulatory proteins, luxR family D8X09_07585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D8X09_07585 PF03129 Anticodon binding domain D8X09_07585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D8X09_07585 PF02824 TGS domain D8X09_07590 PF00707 Translation initiation factor IF-3, C-terminal domain D8X09_07590 PF05198 Translation initiation factor IF-3, N-terminal domain D8X09_07595 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D8X09_07595 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D8X09_07605 PF00381 PTS HPr component phosphorylation site D8X09_07610 PF05524 PEP-utilising enzyme, N-terminal D8X09_07610 PF00391 PEP-utilising enzyme, mobile domain D8X09_07610 PF02896 PEP-utilising enzyme, TIM barrel domain D8X09_07625 PF02423 Ornithine cyclodeaminase/mu-crystallin family D8X09_07635 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_07640 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_07645 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_07650 PF00005 ABC transporter D8X09_07665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D8X09_07665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D8X09_07675 PF02293 AmiS/UreI family transporter D8X09_07680 PF03069 Acetamidase/Formamidase family D8X09_07695 PF01116 Fructose-bisphosphate aldolase class-II D8X09_07705 PF01259 SAICAR synthetase D8X09_07710 PF15723 Motility quorum-sensing regulator, toxin of MqsA D8X09_07715 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D8X09_07725 PF02600 Disulfide bond formation protein DsbB D8X09_07730 PF00731 AIR carboxylase D8X09_07735 PF02222 ATP-grasp domain D8X09_07735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D8X09_07740 PF01300 Telomere recombination D8X09_07740 PF03481 Putative GTP-binding controlling metal-binding D8X09_07745 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_07750 PF09339 IclR helix-turn-helix domain D8X09_07750 PF01614 Bacterial transcriptional regulator D8X09_07755 PF00491 Arginase family D8X09_07760 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_07765 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_07770 PF00005 ABC transporter D8X09_07775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_07775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_07785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_07785 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_07785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_07790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_07790 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_07790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_07795 PF03466 LysR substrate binding domain D8X09_07795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_07800 PF02899 Phage integrase, N-terminal SAM-like domain D8X09_07800 PF00589 Phage integrase family D8X09_07805 PF04073 Aminoacyl-tRNA editing domain D8X09_07810 PF01174 SNO glutamine amidotransferase family D8X09_07825 PF00768 D-alanyl-D-alanine carboxypeptidase D8X09_07845 PF00580 UvrD/REP helicase N-terminal domain D8X09_07845 PF12705 PD-(D/E)XK nuclease superfamily D8X09_07845 PF13361 UvrD-like helicase C-terminal domain D8X09_07855 PF12169 DNA polymerase III subunits gamma and tau domain III D8X09_07855 PF12170 DNA polymerase III tau subunit V interacting with alpha D8X09_07855 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D8X09_07860 PF02575 YbaB/EbfC DNA-binding family D8X09_07865 PF13662 Toprim domain D8X09_07865 PF02132 RecR protein D8X09_07885 PF04228 Putative neutral zinc metallopeptidase D8X09_07890 PF01300 Telomere recombination D8X09_07930 PF03358 NADPH-dependent FMN reductase D8X09_07935 PF07311 Dodecin D8X09_07940 PF00488 MutS domain V D8X09_07940 PF05190 MutS family domain IV D8X09_07940 PF05192 MutS domain III D8X09_07940 PF05188 MutS domain II D8X09_07940 PF01624 MutS domain I D8X09_07945 PF08007 Cupin superfamily protein D8X09_07950 PF16970 Type-1 fimbrial protein, A D8X09_07955 PF06804 NlpB/DapX lipoprotein D8X09_07960 PF00701 Dihydrodipicolinate synthetase family D8X09_07975 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_07980 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_07985 PF00005 ABC transporter D8X09_07990 PF13291 ACT domain D8X09_07990 PF04607 Region found in RelA / SpoT proteins D8X09_07990 PF02824 TGS domain D8X09_07995 PF01192 RNA polymerase Rpb6 D8X09_08000 PF00625 Guanylate kinase D8X09_08005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D8X09_08010 PF00034 Cytochrome c D8X09_08020 PF00877 NlpC/P60 family D8X09_08025 PF01048 Phosphorylase superfamily D8X09_08025 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D8X09_08045 PF03755 YicC-like family, N-terminal region D8X09_08045 PF08340 Domain of unknown function (DUF1732) D8X09_08050 PF03725 3' exoribonuclease family, domain 2 D8X09_08050 PF01138 3' exoribonuclease family, domain 1 D8X09_08060 PF03466 LysR substrate binding domain D8X09_08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08065 PF02203 Tar ligand binding domain homologue D8X09_08065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D8X09_08065 PF00672 HAMP domain D8X09_08070 PF00672 HAMP domain D8X09_08070 PF00563 EAL domain D8X09_08070 PF00990 Diguanylate cyclase, GGDEF domain D8X09_08070 PF17154 Gammaproteobacterial periplasmic sensor domain D8X09_08075 PF01725 Ham1 family D8X09_08085 PF06969 HemN C-terminal domain D8X09_08085 PF04055 Radical SAM superfamily D8X09_08095 PF00512 His Kinase A (phospho-acceptor) domain D8X09_08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_08095 PF00989 PAS fold D8X09_08100 PF00072 Response regulator receiver domain D8X09_08100 PF00158 Sigma-54 interaction domain D8X09_08100 PF02954 Bacterial regulatory protein, Fis family D8X09_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08105 PF03466 LysR substrate binding domain D8X09_08110 PF02678 Pirin D8X09_08110 PF17954 Quercetinase C-terminal cupin domain D8X09_08115 PF02678 Pirin D8X09_08115 PF05726 Pirin C-terminal cupin domain D8X09_08125 PF00005 ABC transporter D8X09_08125 PF08402 TOBE domain D8X09_08130 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_08140 PF00175 Oxidoreductase NAD-binding domain D8X09_08140 PF00970 Oxidoreductase FAD-binding domain D8X09_08145 PF03466 LysR substrate binding domain D8X09_08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08155 PF00248 Aldo/keto reductase family D8X09_08165 PF01042 Endoribonuclease L-PSP D8X09_08170 PF00270 DEAD/DEAH box helicase D8X09_08170 PF00271 Helicase conserved C-terminal domain D8X09_08170 PF17191 RecG wedge domain D8X09_08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08175 PF03466 LysR substrate binding domain D8X09_08180 PF03466 LysR substrate binding domain D8X09_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08185 PF00171 Aldehyde dehydrogenase family D8X09_08190 PF00210 Ferritin-like domain D8X09_08210 PF00535 Glycosyl transferase family 2 D8X09_08220 PF00005 ABC transporter D8X09_08230 PF00534 Glycosyl transferases group 1 D8X09_08240 PF02563 Polysaccharide biosynthesis/export protein D8X09_08245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D8X09_08245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D8X09_08245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D8X09_08250 PF01370 NAD dependent epimerase/dehydratase family D8X09_08255 PF05159 Capsule polysaccharide biosynthesis protein D8X09_08260 PF05159 Capsule polysaccharide biosynthesis protein D8X09_08270 PF00106 short chain dehydrogenase D8X09_08295 PF00005 ABC transporter D8X09_08300 PF00005 ABC transporter D8X09_08300 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_08315 PF03741 Integral membrane protein TerC family D8X09_08325 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_08340 PF17863 AAA lid domain D8X09_08340 PF07726 ATPase family associated with various cellular activities (AAA) D8X09_08375 PF00884 Sulfatase D8X09_08400 PF00072 Response regulator receiver domain D8X09_08400 PF00196 Bacterial regulatory proteins, luxR family D8X09_08405 PF03797 Autotransporter beta-domain D8X09_08405 PF00082 Subtilase family D8X09_08405 PF12951 Passenger-associated-transport-repeat D8X09_08410 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D8X09_08420 PF00043 Glutathione S-transferase, C-terminal domain D8X09_08420 PF02798 Glutathione S-transferase, N-terminal domain D8X09_08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08430 PF03466 LysR substrate binding domain D8X09_08435 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_08445 PF01070 FMN-dependent dehydrogenase D8X09_08450 PF01557 Fumarylacetoacetate (FAA) hydrolase family D8X09_08465 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08470 PF03466 LysR substrate binding domain D8X09_08475 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_08500 PF03358 NADPH-dependent FMN reductase D8X09_08525 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_08535 PF03466 LysR substrate binding domain D8X09_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_08555 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D8X09_08555 PF13244 Domain of unknown function (DUF4040) D8X09_08555 PF00361 Proton-conducting membrane transporter D8X09_08555 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D8X09_08560 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D8X09_08565 PF00361 Proton-conducting membrane transporter D8X09_08570 PF01899 Na+/H+ ion antiporter subunit D8X09_08575 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D8X09_08600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D8X09_08605 PF17676 LD-carboxypeptidase C-terminal domain D8X09_08605 PF02016 LD-carboxypeptidase N-terminal domain D8X09_08610 PF00378 Enoyl-CoA hydratase/isomerase D8X09_08615 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_08625 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_08630 PF00005 ABC transporter D8X09_08630 PF12848 ABC transporter D8X09_08635 PF00005 ABC transporter D8X09_08665 PF00175 Oxidoreductase NAD-binding domain D8X09_08665 PF00970 Oxidoreductase FAD-binding domain D8X09_08665 PF00042 Globin D8X09_08670 PF02082 Transcriptional regulator D8X09_08675 PF01266 FAD dependent oxidoreductase D8X09_08690 PF01571 Aminomethyltransferase folate-binding domain D8X09_08695 PF02618 YceG-like family D8X09_08700 PF02223 Thymidylate kinase D8X09_08705 PF12169 DNA polymerase III subunits gamma and tau domain III D8X09_08710 PF01026 TatD related DNase D8X09_08725 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_08735 PF00005 ABC transporter D8X09_08745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D8X09_08745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D8X09_08755 PF01546 Peptidase family M20/M25/M40 D8X09_08755 PF07687 Peptidase dimerisation domain D8X09_08760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_08760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_08760 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_08770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_08780 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_08780 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D8X09_08785 PF00392 Bacterial regulatory proteins, gntR family D8X09_08785 PF07729 FCD domain D8X09_08825 PF01425 Amidase D8X09_08830 PF07286 Protein of unknown function (DUF1445) D8X09_08840 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_08840 PF00989 PAS fold D8X09_08840 PF01627 Hpt domain D8X09_08840 PF00072 Response regulator receiver domain D8X09_08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_08840 PF00512 His Kinase A (phospho-acceptor) domain D8X09_08845 PF00072 Response regulator receiver domain D8X09_08845 PF00196 Bacterial regulatory proteins, luxR family D8X09_08850 PF05860 haemagglutination activity domain D8X09_08850 PF13018 Extended Signal Peptide of Type V secretion system D8X09_08850 PF13332 Hemagglutinin repeat D8X09_08850 PF05594 Haemagluttinin repeat D8X09_08855 PF16970 Type-1 fimbrial protein, A D8X09_08860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D8X09_08860 PF02753 Pili assembly chaperone PapD, C-terminal domain D8X09_08865 PF13954 PapC N-terminal domain D8X09_08865 PF13953 PapC C-terminal domain D8X09_08865 PF00577 Outer membrane usher protein D8X09_08870 PF00419 Fimbrial protein D8X09_08875 PF17287 POTRA domain D8X09_08875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D8X09_08875 PF08479 POTRA domain, ShlB-type D8X09_08890 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_08925 PF05378 Hydantoinase/oxoprolinase N-terminal region D8X09_08925 PF01968 Hydantoinase/oxoprolinase D8X09_08940 PF05552 Conserved TM helix D8X09_08940 PF00924 Mechanosensitive ion channel D8X09_08950 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_08955 PF00588 SpoU rRNA Methylase family D8X09_08960 PF00459 Inositol monophosphatase family D8X09_08965 PF03471 Transporter associated domain D8X09_08965 PF03741 Integral membrane protein TerC family D8X09_08970 PF02673 Bacitracin resistance protein BacA D8X09_08975 PF00149 Calcineurin-like phosphoesterase D8X09_08980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D8X09_08990 PF09190 DALR domain D8X09_08990 PF01406 tRNA synthetases class I (C) catalytic domain D8X09_08995 PF02805 Metal binding domain of Ada D8X09_08995 PF00730 HhH-GPD superfamily base excision DNA repair protein D8X09_08995 PF12833 Helix-turn-helix domain D8X09_08995 PF06029 AlkA N-terminal domain D8X09_09000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D8X09_09010 PF09179 TilS substrate binding domain D8X09_09010 PF01171 PP-loop family D8X09_09015 PF13840 ACT domain D8X09_09015 PF01842 ACT domain D8X09_09015 PF00696 Amino acid kinase family D8X09_09040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_09040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_09045 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D8X09_09050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_09055 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_09060 PF00561 alpha/beta hydrolase fold D8X09_09065 PF01958 Domain of unknown function DUF108 D8X09_09065 PF03447 Homoserine dehydrogenase, NAD binding domain D8X09_09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_09080 PF03466 LysR substrate binding domain D8X09_09095 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_09100 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_09105 PF08402 TOBE domain D8X09_09105 PF00005 ABC transporter D8X09_09115 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_09115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D8X09_09120 PF09339 IclR helix-turn-helix domain D8X09_09120 PF01614 Bacterial transcriptional regulator D8X09_09125 PF13380 CoA binding domain D8X09_09130 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_09135 PF01042 Endoribonuclease L-PSP D8X09_09160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D8X09_09170 PF00535 Glycosyl transferase family 2 D8X09_09175 PF14883 Hypothetical glycosyl hydrolase family 13 D8X09_09175 PF01522 Polysaccharide deacetylase D8X09_09195 PF12802 MarR family D8X09_09200 PF00072 Response regulator receiver domain D8X09_09200 PF00196 Bacterial regulatory proteins, luxR family D8X09_09210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D8X09_09210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D8X09_09210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D8X09_09210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D8X09_09215 PF00342 Phosphoglucose isomerase D8X09_09220 PF00132 Bacterial transferase hexapeptide (six repeats) D8X09_09230 PF02146 Sir2 family D8X09_09235 PF00459 Inositol monophosphatase family D8X09_09240 PF00171 Aldehyde dehydrogenase family D8X09_09245 PF00202 Aminotransferase class-III D8X09_09260 PF00580 UvrD/REP helicase N-terminal domain D8X09_09260 PF13361 UvrD-like helicase C-terminal domain D8X09_09265 PF01544 CorA-like Mg2+ transporter protein D8X09_09275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_09280 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_09285 PF12911 N-terminal TM domain of oligopeptide transport permease C D8X09_09285 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_09290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_09290 PF00005 ABC transporter D8X09_09295 PF01047 MarR family D8X09_09315 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D8X09_09315 PF08479 POTRA domain, ShlB-type D8X09_09320 PF00990 Diguanylate cyclase, GGDEF domain D8X09_09320 PF03707 Bacterial signalling protein N terminal repeat D8X09_09320 PF00563 EAL domain D8X09_09350 PF13629 Pilus formation protein N terminal region D8X09_09350 PF04972 BON domain D8X09_09350 PF00263 Bacterial type II and III secretion system protein D8X09_09390 PF00072 Response regulator receiver domain D8X09_09390 PF02954 Bacterial regulatory protein, Fis family D8X09_09390 PF00158 Sigma-54 interaction domain D8X09_09405 PF04542 Sigma-70 region 2 D8X09_09405 PF08281 Sigma-70, region 4 D8X09_09415 PF00034 Cytochrome c D8X09_09420 PF09285 Elongation factor P, C-terminal D8X09_09420 PF08207 Elongation factor P (EF-P) KOW-like domain D8X09_09420 PF01132 Elongation factor P (EF-P) OB domain D8X09_09435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D8X09_09440 PF00694 Aconitase C-terminal domain D8X09_09440 PF00330 Aconitase family (aconitate hydratase) D8X09_09450 PF00593 TonB dependent receptor D8X09_09450 PF07715 TonB-dependent Receptor Plug Domain D8X09_09470 PF00691 OmpA family D8X09_09480 PF11791 Aconitate B N-terminal domain D8X09_09480 PF06434 Aconitate hydratase 2 N-terminus D8X09_09480 PF00330 Aconitase family (aconitate hydratase) D8X09_09505 PF00892 EamA-like transporter family D8X09_09510 PF01925 Sulfite exporter TauE/SafE D8X09_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_09530 PF03466 LysR substrate binding domain D8X09_09535 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D8X09_09535 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D8X09_09545 PF03466 LysR substrate binding domain D8X09_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_09590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_09590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_09595 PF01425 Amidase D8X09_09605 PF00171 Aldehyde dehydrogenase family D8X09_09620 PF09334 tRNA synthetases class I (M) D8X09_09620 PF13603 Leucyl-tRNA synthetase, Domain 2 D8X09_09620 PF08264 Anticodon-binding domain of tRNA D8X09_09620 PF00133 tRNA synthetases class I (I, L, M and V) D8X09_09625 PF07690 Major Facilitator Superfamily D8X09_09630 PF01047 MarR family D8X09_09650 PF00916 Sulfate permease family D8X09_09650 PF01740 STAS domain D8X09_09655 PF00471 Ribosomal protein L33 D8X09_09660 PF00830 Ribosomal L28 family D8X09_09665 PF07690 Major Facilitator Superfamily D8X09_09685 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_09690 PF00005 ABC transporter D8X09_09690 PF00571 CBS domain D8X09_09695 PF01361 Tautomerase enzyme D8X09_09700 PF00108 Thiolase, N-terminal domain D8X09_09700 PF02803 Thiolase, C-terminal domain D8X09_09710 PF07729 FCD domain D8X09_09710 PF00392 Bacterial regulatory proteins, gntR family D8X09_09720 PF00378 Enoyl-CoA hydratase/isomerase D8X09_09730 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_09735 PF00080 Copper/zinc superoxide dismutase (SODC) D8X09_09750 PF00005 ABC transporter D8X09_09755 PF03459 TOBE domain D8X09_09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_09775 PF00529 HlyD membrane-fusion protein of T1SS D8X09_09775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D8X09_09780 PF00873 AcrB/AcrD/AcrF family D8X09_09790 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D8X09_09795 PF01648 4'-phosphopantetheinyl transferase superfamily D8X09_09800 PF00933 Glycosyl hydrolase family 3 N terminal domain D8X09_09805 PF02151 UvrB/uvrC motif D8X09_09805 PF01541 GIY-YIG catalytic domain D8X09_09805 PF08459 UvrC Helix-hairpin-helix N-terminal D8X09_09810 PF01066 CDP-alcohol phosphatidyltransferase D8X09_09820 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D8X09_09820 PF14489 QueF-like protein D8X09_09825 PF00463 Isocitrate lyase family D8X09_09845 PF02653 Branched-chain amino acid transport system / permease component D8X09_09850 PF13458 Periplasmic binding protein D8X09_09855 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D8X09_09855 PF00355 Rieske [2Fe-2S] domain D8X09_09860 PF00866 Ring hydroxylating beta subunit D8X09_09865 PF00378 Enoyl-CoA hydratase/isomerase D8X09_09875 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_09880 PF02515 CoA-transferase family III D8X09_09885 PF07859 alpha/beta hydrolase fold D8X09_09890 PF14535 AMP-binding enzyme C-terminal domain D8X09_09890 PF00501 AMP-binding enzyme D8X09_09895 PF00108 Thiolase, N-terminal domain D8X09_09895 PF02803 Thiolase, C-terminal domain D8X09_09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_09910 PF03466 LysR substrate binding domain D8X09_09915 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_09940 PF01152 Bacterial-like globin D8X09_09985 PF01522 Polysaccharide deacetylase D8X09_09990 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_10020 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_10020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D8X09_10045 PF03466 LysR substrate binding domain D8X09_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_10055 PF01799 [2Fe-2S] binding domain D8X09_10055 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_10060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D8X09_10070 PF12833 Helix-turn-helix domain D8X09_10070 PF06719 AraC-type transcriptional regulator N-terminus D8X09_10090 PF07690 Major Facilitator Superfamily D8X09_10120 PF00005 ABC transporter D8X09_10120 PF00664 ABC transporter transmembrane region D8X09_10130 PF02535 ZIP Zinc transporter D8X09_10145 PF01740 STAS domain D8X09_10145 PF00916 Sulfate permease family D8X09_10165 PF03625 Domain of unknown function DUF302 D8X09_10165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D8X09_10175 PF12833 Helix-turn-helix domain D8X09_10175 PF02805 Metal binding domain of Ada D8X09_10180 PF07237 Protein of unknown function (DUF1428) D8X09_10185 PF02567 Phenazine biosynthesis-like protein D8X09_10190 PF03466 LysR substrate binding domain D8X09_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_10195 PF04286 Protein of unknown function (DUF445) D8X09_10210 PF00171 Aldehyde dehydrogenase family D8X09_10215 PF02954 Bacterial regulatory protein, Fis family D8X09_10215 PF00158 Sigma-54 interaction domain D8X09_10215 PF01590 GAF domain D8X09_10240 PF03788 LrgA family D8X09_10245 PF13649 Methyltransferase domain D8X09_10255 PF00155 Aminotransferase class I and II D8X09_10260 PF00202 Aminotransferase class-III D8X09_10295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D8X09_10295 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D8X09_10300 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D8X09_10300 PF12801 4Fe-4S binding domain D8X09_10300 PF13746 4Fe-4S dicluster domain D8X09_10325 PF00005 ABC transporter D8X09_10330 PF01061 ABC-2 type transporter D8X09_10335 PF01594 AI-2E family transporter D8X09_10370 PF04546 Sigma-70, non-essential region D8X09_10370 PF03979 Sigma-70 factor, region 1.1 D8X09_10370 PF00140 Sigma-70 factor, region 1.2 D8X09_10370 PF04542 Sigma-70 region 2 D8X09_10370 PF04539 Sigma-70 region 3 D8X09_10370 PF04545 Sigma-70, region 4 D8X09_10375 PF10410 DnaB-helicase binding domain of primase D8X09_10375 PF08278 DNA primase DnaG DnaB-binding D8X09_10375 PF08275 DNA primase catalytic core, N-terminal domain D8X09_10375 PF01807 CHC2 zinc finger D8X09_10380 PF01165 Ribosomal protein S21 D8X09_10390 PF00709 Adenylosuccinate synthetase D8X09_10395 PF13393 Histidyl-tRNA synthetase D8X09_10400 PF01145 SPFH domain / Band 7 family D8X09_10405 PF01145 SPFH domain / Band 7 family D8X09_10405 PF12221 Bacterial membrane protein N terminal D8X09_10410 PF01926 50S ribosome-binding GTPase D8X09_10410 PF16360 GTP-binding GTPase Middle Region D8X09_10410 PF13167 GTP-binding GTPase N-terminal D8X09_10415 PF17209 Hfq protein D8X09_10420 PF00155 Aminotransferase class I and II D8X09_10425 PF01926 50S ribosome-binding GTPase D8X09_10425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D8X09_10430 PF13360 PQQ-like domain D8X09_10435 PF09976 Tetratricopeptide repeat-like domain D8X09_10440 PF13393 Histidyl-tRNA synthetase D8X09_10440 PF03129 Anticodon binding domain D8X09_10445 PF04551 GcpE protein D8X09_10455 PF04055 Radical SAM superfamily D8X09_10460 PF00334 Nucleoside diphosphate kinase D8X09_10465 PF10458 Valyl tRNA synthetase tRNA binding arm D8X09_10465 PF00133 tRNA synthetases class I (I, L, M and V) D8X09_10465 PF08264 Anticodon-binding domain of tRNA D8X09_10480 PF08521 Two-component sensor kinase N-terminal D8X09_10480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_10480 PF00512 His Kinase A (phospho-acceptor) domain D8X09_10505 PF00266 Aminotransferase class-V D8X09_10510 PF01746 tRNA (Guanine-1)-methyltransferase D8X09_10515 PF01782 RimM N-terminal domain D8X09_10520 PF00886 Ribosomal protein S16 D8X09_10530 PF01206 Sulfurtransferase TusA D8X09_10535 PF01411 tRNA synthetases class II (A) D8X09_10535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D8X09_10535 PF02272 DHHA1 domain D8X09_10580 PF01425 Amidase D8X09_10585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_10585 PF00005 ABC transporter D8X09_10590 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_10595 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_10600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_10620 PF03466 LysR substrate binding domain D8X09_10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_10625 PF13416 Bacterial extracellular solute-binding protein D8X09_10630 PF01266 FAD dependent oxidoreductase D8X09_10635 PF00970 Oxidoreductase FAD-binding domain D8X09_10635 PF00175 Oxidoreductase NAD-binding domain D8X09_10635 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_10640 PF02261 Aspartate decarboxylase D8X09_10660 PF07005 Sugar-binding N-terminal domain D8X09_10660 PF17042 Nucleotide-binding C-terminal domain D8X09_10675 PF00378 Enoyl-CoA hydratase/isomerase D8X09_10685 PF02142 MGS-like domain D8X09_10690 PF04384 Iron-sulphur cluster assembly D8X09_10695 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_10700 PF00012 Hsp70 protein D8X09_10705 PF07743 HSCB C-terminal oligomerisation domain D8X09_10710 PF01521 Iron-sulphur cluster biosynthesis D8X09_10715 PF01592 NifU-like N terminal domain D8X09_10720 PF00266 Aminotransferase class-V D8X09_10725 PF02082 Transcriptional regulator D8X09_10730 PF01451 Low molecular weight phosphotyrosine protein phosphatase D8X09_10735 PF17757 UvrB interaction domain D8X09_10735 PF00271 Helicase conserved C-terminal domain D8X09_10735 PF04851 Type III restriction enzyme, res subunit D8X09_10735 PF02151 UvrB/uvrC motif D8X09_10735 PF12344 Ultra-violet resistance protein B D8X09_10740 PF00155 Aminotransferase class I and II D8X09_10745 PF00717 Peptidase S24-like D8X09_10745 PF01726 LexA DNA binding domain D8X09_10770 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_10775 PF01144 Coenzyme A transferase D8X09_10780 PF01144 Coenzyme A transferase D8X09_10800 PF02803 Thiolase, C-terminal domain D8X09_10800 PF00108 Thiolase, N-terminal domain D8X09_10810 PF00378 Enoyl-CoA hydratase/isomerase D8X09_10820 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_10825 PF02515 CoA-transferase family III D8X09_10830 PF03466 LysR substrate binding domain D8X09_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_10835 PF02190 ATP-dependent protease La (LON) substrate-binding domain D8X09_10835 PF05362 Lon protease (S16) C-terminal proteolytic domain D8X09_10835 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_10840 PF06689 ClpX C4-type zinc finger D8X09_10840 PF10431 C-terminal, D2-small domain, of ClpB protein D8X09_10840 PF07724 AAA domain (Cdc48 subfamily) D8X09_10845 PF00574 Clp protease D8X09_10850 PF05697 Bacterial trigger factor protein (TF) D8X09_10850 PF05698 Bacterial trigger factor protein (TF) C-terminus D8X09_10850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D8X09_10855 PF03350 Uncharacterized protein family, UPF0114 D8X09_10860 PF00313 'Cold-shock' DNA-binding domain D8X09_10870 PF00313 'Cold-shock' DNA-binding domain D8X09_10905 PF00132 Bacterial transferase hexapeptide (six repeats) D8X09_10905 PF14602 Hexapeptide repeat of succinyl-transferase D8X09_10905 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D8X09_10910 PF01546 Peptidase family M20/M25/M40 D8X09_10910 PF07687 Peptidase dimerisation domain D8X09_10915 PF05175 Methyltransferase small domain D8X09_10920 PF12848 ABC transporter D8X09_10920 PF00005 ABC transporter D8X09_10925 PF07715 TonB-dependent Receptor Plug Domain D8X09_10930 PF00580 UvrD/REP helicase N-terminal domain D8X09_10930 PF13361 UvrD-like helicase C-terminal domain D8X09_10950 PF00551 Formyl transferase D8X09_10955 PF01687 Riboflavin kinase D8X09_10955 PF06574 FAD synthetase D8X09_10960 PF06827 Zinc finger found in FPG and IleRS D8X09_10960 PF00133 tRNA synthetases class I (I, L, M and V) D8X09_10960 PF08264 Anticodon-binding domain of tRNA D8X09_10965 PF01252 Signal peptidase (SPase) II D8X09_10970 PF02441 Flavoprotein D8X09_10970 PF04127 DNA / pantothenate metabolism flavoprotein D8X09_10980 PF01037 Lrp/AsnC ligand binding domain D8X09_11000 PF13406 Transglycosylase SLT domain D8X09_11005 PF04305 Protein of unknown function (DUF455) D8X09_11035 PF05532 CsbD-like D8X09_11045 PF04972 BON domain D8X09_11070 PF00005 ABC transporter D8X09_11075 PF13472 GDSL-like Lipase/Acylhydrolase family D8X09_11080 PF13145 PPIC-type PPIASE domain D8X09_11085 PF03009 Glycerophosphoryl diester phosphodiesterase family D8X09_11090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D8X09_11095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D8X09_11095 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_11100 PF08534 Redoxin D8X09_11100 PF00462 Glutaredoxin D8X09_11110 PF09278 MerR, DNA binding D8X09_11110 PF00376 MerR family regulatory protein D8X09_11115 PF05958 tRNA (Uracil-5-)-methyltransferase D8X09_11135 PF01476 LysM domain D8X09_11135 PF01551 Peptidase family M23 D8X09_11145 PF01975 Survival protein SurE D8X09_11150 PF02660 Glycerol-3-phosphate acyltransferase D8X09_11160 PF00814 Glycoprotease family D8X09_11165 PF00860 Permease family D8X09_11175 PF00085 Thioredoxin D8X09_11180 PF01205 Uncharacterized protein family UPF0029 D8X09_11190 PF00583 Acetyltransferase (GNAT) family D8X09_11195 PF12802 MarR family D8X09_11205 PF00202 Aminotransferase class-III D8X09_11210 PF16868 NMT1-like family D8X09_11230 PF03797 Autotransporter beta-domain D8X09_11245 PF13396 Phospholipase_D-nuclease N-terminal D8X09_11245 PF13091 PLD-like domain D8X09_11250 PF01740 STAS domain D8X09_11255 PF13581 Histidine kinase-like ATPase domain D8X09_11260 PF00842 Alanine racemase, C-terminal domain D8X09_11260 PF01168 Alanine racemase, N-terminal domain D8X09_11270 PF07228 Stage II sporulation protein E (SpoIIE) D8X09_11270 PF00672 HAMP domain D8X09_11295 PF04542 Sigma-70 region 2 D8X09_11295 PF08281 Sigma-70, region 4 D8X09_11310 PF01312 FlhB HrpN YscU SpaS Family D8X09_11315 PF01311 Bacterial export proteins, family 1 D8X09_11320 PF01313 Bacterial export proteins, family 3 D8X09_11325 PF00813 FliP family D8X09_11330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D8X09_11345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D8X09_11345 PF18269 T3SS EscN ATPase C-terminal domain D8X09_11345 PF02874 ATP synthase alpha/beta family, beta-barrel domain D8X09_11350 PF02108 Flagellar assembly protein FliH D8X09_11360 PF01514 Secretory protein of YscJ/FliF family D8X09_11425 PF00771 FHIPEP family D8X09_11455 PF01272 Transcription elongation factor, GreA/GreB, C-term D8X09_11455 PF03449 Transcription elongation factor, N-terminal D8X09_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D8X09_11460 PF02203 Tar ligand binding domain homologue D8X09_11460 PF00672 HAMP domain D8X09_11465 PF00860 Permease family D8X09_11495 PF13419 Haloacid dehalogenase-like hydrolase D8X09_11500 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_11505 PF00005 ABC transporter D8X09_11505 PF08402 TOBE domain D8X09_11510 PF03466 LysR substrate binding domain D8X09_11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_11520 PF00581 Rhodanese-like domain D8X09_11530 PF01435 Peptidase family M48 D8X09_11535 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_11535 PF00107 Zinc-binding dehydrogenase D8X09_11540 PF00892 EamA-like transporter family D8X09_11550 PF01047 MarR family D8X09_11560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D8X09_11560 PF00529 HlyD membrane-fusion protein of T1SS D8X09_11565 PF07690 Major Facilitator Superfamily D8X09_11570 PF00180 Isocitrate/isopropylmalate dehydrogenase D8X09_11575 PF00392 Bacterial regulatory proteins, gntR family D8X09_11575 PF00155 Aminotransferase class I and II D8X09_11580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_11585 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_11590 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_11590 PF12911 N-terminal TM domain of oligopeptide transport permease C D8X09_11595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_11595 PF00005 ABC transporter D8X09_11605 PF00202 Aminotransferase class-III D8X09_11610 PF07883 Cupin domain D8X09_11615 PF00850 Histone deacetylase domain D8X09_11620 PF01546 Peptidase family M20/M25/M40 D8X09_11620 PF07687 Peptidase dimerisation domain D8X09_11630 PF00171 Aldehyde dehydrogenase family D8X09_11635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D8X09_11640 PF00202 Aminotransferase class-III D8X09_11645 PF01235 Sodium:alanine symporter family D8X09_11650 PF05872 Bacterial protein of unknown function (DUF853) D8X09_11655 PF01709 Transcriptional regulator D8X09_11660 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D8X09_11660 PF02843 Phosphoribosylglycinamide synthetase, C domain D8X09_11660 PF02844 Phosphoribosylglycinamide synthetase, N domain D8X09_11665 PF01218 Coproporphyrinogen III oxidase D8X09_11670 PF01467 Cytidylyltransferase-like D8X09_11680 PF02590 Predicted SPOUT methyltransferase D8X09_11685 PF02545 Maf-like protein D8X09_11690 PF03212 Pertactin D8X09_11690 PF03797 Autotransporter beta-domain D8X09_11730 PF00575 S1 RNA binding domain D8X09_11730 PF10150 Ribonuclease E/G family D8X09_11735 PF01842 ACT domain D8X09_11735 PF00800 Prephenate dehydratase D8X09_11745 PF07690 Major Facilitator Superfamily D8X09_11750 PF00005 ABC transporter D8X09_11750 PF00664 ABC transporter transmembrane region D8X09_11755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D8X09_11765 PF03692 Putative zinc- or iron-chelating domain D8X09_11780 PF00884 Sulfatase D8X09_11785 PF13439 Glycosyltransferase Family 4 D8X09_11785 PF00534 Glycosyl transferases group 1 D8X09_11790 PF00535 Glycosyl transferase family 2 D8X09_11795 PF01522 Polysaccharide deacetylase D8X09_11800 PF00534 Glycosyl transferases group 1 D8X09_11800 PF13439 Glycosyltransferase Family 4 D8X09_11805 PF14579 Helix-hairpin-helix motif D8X09_11805 PF01336 OB-fold nucleic acid binding domain D8X09_11805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D8X09_11805 PF02811 PHP domain D8X09_11805 PF07733 Bacterial DNA polymerase III alpha NTPase domain D8X09_11815 PF04408 Helicase associated domain (HA2) D8X09_11815 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D8X09_11815 PF00270 DEAD/DEAH box helicase D8X09_11815 PF00271 Helicase conserved C-terminal domain D8X09_11815 PF11898 Domain of unknown function (DUF3418) D8X09_11820 PF00583 Acetyltransferase (GNAT) family D8X09_11820 PF00696 Amino acid kinase family D8X09_11825 PF04362 Bacterial Fe(2+) trafficking D8X09_11830 PF04185 Phosphoesterase family D8X09_11830 PF05506 Domain of unknown function (DUF756) D8X09_11835 PF01895 PhoU domain D8X09_11840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D8X09_11845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_11845 PF18158 Adaptive response protein AidB N-terminal domain D8X09_11845 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_11850 PF02646 RmuC family D8X09_11860 PF02245 Methylpurine-DNA glycosylase (MPG) D8X09_11870 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_11875 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_11880 PF08402 TOBE domain D8X09_11880 PF00005 ABC transporter D8X09_11885 PF13416 Bacterial extracellular solute-binding protein D8X09_11905 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_11915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_11930 PF00285 Citrate synthase, C-terminal domain D8X09_11935 PF03937 Flavinator of succinate dehydrogenase D8X09_11940 PF13085 2Fe-2S iron-sulfur cluster binding domain D8X09_11945 PF02910 Fumarate reductase flavoprotein C-term D8X09_11945 PF00890 FAD binding domain D8X09_11950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D8X09_11955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D8X09_11960 PF07702 UTRA domain D8X09_11960 PF00392 Bacterial regulatory proteins, gntR family D8X09_11965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D8X09_11965 PF00056 lactate/malate dehydrogenase, NAD binding domain D8X09_11975 PF00285 Citrate synthase, C-terminal domain D8X09_11980 PF00694 Aconitase C-terminal domain D8X09_11980 PF00330 Aconitase family (aconitate hydratase) D8X09_11985 PF04303 PrpF protein D8X09_11990 PF03972 MmgE/PrpD family D8X09_12000 PF01170 Putative RNA methylase family UPF0020 D8X09_12000 PF02926 THUMP domain D8X09_12020 PF13193 AMP-binding enzyme C-terminal domain D8X09_12020 PF00501 AMP-binding enzyme D8X09_12020 PF16177 Acetyl-coenzyme A synthetase N-terminus D8X09_12030 PF01430 Hsp33 protein D8X09_12055 PF00211 Adenylate and Guanylate cyclase catalytic domain D8X09_12060 PF04977 Septum formation initiator D8X09_12065 PF03952 Enolase, N-terminal domain D8X09_12065 PF00113 Enolase, C-terminal TIM barrel domain D8X09_12075 PF00793 DAHP synthetase I family D8X09_12080 PF06418 CTP synthase N-terminus D8X09_12080 PF00117 Glutamine amidotransferase class-I D8X09_12090 PF00557 Metallopeptidase family M24 D8X09_12090 PF01321 Creatinase/Prolidase N-terminal domain D8X09_12100 PF03576 Peptidase family S58 D8X09_12105 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_12105 PF12911 N-terminal TM domain of oligopeptide transport permease C D8X09_12110 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_12115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_12120 PF00005 ABC transporter D8X09_12120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_12125 PF01112 Asparaginase D8X09_12135 PF01144 Coenzyme A transferase D8X09_12155 PF16363 GDP-mannose 4,6 dehydratase D8X09_12170 PF01212 Beta-eliminating lyase D8X09_12175 PF00892 EamA-like transporter family D8X09_12180 PF16177 Acetyl-coenzyme A synthetase N-terminus D8X09_12180 PF00501 AMP-binding enzyme D8X09_12180 PF13193 AMP-binding enzyme C-terminal domain D8X09_12190 PF03928 Haem-degrading D8X09_12200 PF00877 NlpC/P60 family D8X09_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_12215 PF03466 LysR substrate binding domain D8X09_12220 PF00171 Aldehyde dehydrogenase family D8X09_12230 PF03466 LysR substrate binding domain D8X09_12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_12240 PF00883 Cytosol aminopeptidase family, catalytic domain D8X09_12240 PF02789 Cytosol aminopeptidase family, N-terminal domain D8X09_12245 PF04364 DNA polymerase III chi subunit, HolC D8X09_12255 PF01027 Inhibitor of apoptosis-promoting Bax1 D8X09_12260 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_12275 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_12285 PF02565 Recombination protein O C terminal D8X09_12285 PF11967 Recombination protein O N terminal D8X09_12290 PF07650 KH domain D8X09_12290 PF01926 50S ribosome-binding GTPase D8X09_12295 PF00035 Double-stranded RNA binding motif D8X09_12295 PF14622 Ribonuclease-III-like D8X09_12300 PF10502 Signal peptidase, peptidase S26 D8X09_12305 PF03144 Elongation factor Tu domain 2 D8X09_12305 PF00009 Elongation factor Tu GTP binding domain D8X09_12305 PF00679 Elongation factor G C-terminus D8X09_12305 PF06421 GTP-binding protein LepA C-terminus D8X09_12310 PF17820 PDZ domain D8X09_12310 PF13180 PDZ domain D8X09_12325 PF08281 Sigma-70, region 4 D8X09_12325 PF04542 Sigma-70 region 2 D8X09_12335 PF02801 Beta-ketoacyl synthase, C-terminal domain D8X09_12335 PF00109 Beta-ketoacyl synthase, N-terminal domain D8X09_12340 PF00550 Phosphopantetheine attachment site D8X09_12350 PF00698 Acyl transferase domain D8X09_12355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D8X09_12355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D8X09_12360 PF02504 Fatty acid synthesis protein D8X09_12365 PF01783 Ribosomal L32p protein family D8X09_12370 PF02620 Large ribosomal RNA subunit accumulation protein YceD D8X09_12375 PF02545 Maf-like protein D8X09_12385 PF01510 N-acetylmuramoyl-L-alanine amidase D8X09_12400 PF03883 Peroxide stress protein YaaA D8X09_12410 PF00106 short chain dehydrogenase D8X09_12415 PF00999 Sodium/hydrogen exchanger family D8X09_12415 PF02254 TrkA-N domain D8X09_12425 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D8X09_12455 PF07690 Major Facilitator Superfamily D8X09_12460 PF07660 Secretin and TonB N terminus short domain D8X09_12460 PF07715 TonB-dependent Receptor Plug Domain D8X09_12460 PF00593 TonB dependent receptor D8X09_12475 PF00990 Diguanylate cyclase, GGDEF domain D8X09_12475 PF17151 Periplasmic sensor domain D8X09_12500 PF02403 Seryl-tRNA synthetase N-terminal domain D8X09_12500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D8X09_12505 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_12505 PF12002 MgsA AAA+ ATPase C terminal D8X09_12505 PF16193 AAA C-terminal domain D8X09_12510 PF03548 Outer membrane lipoprotein carrier protein LolA D8X09_12515 PF01580 FtsK/SpoIIIE family D8X09_12515 PF09397 Ftsk gamma domain D8X09_12515 PF17854 FtsK alpha domain D8X09_12515 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D8X09_12520 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_12525 PF00488 MutS domain V D8X09_12525 PF01713 Smr domain D8X09_12530 PF00893 Small Multidrug Resistance protein D8X09_12540 PF00474 Sodium:solute symporter family D8X09_12555 PF03814 Potassium-transporting ATPase A subunit D8X09_12565 PF02669 K+-transporting ATPase, c chain D8X09_12575 PF00072 Response regulator receiver domain D8X09_12575 PF00486 Transcriptional regulatory protein, C terminal D8X09_12595 PF00180 Isocitrate/isopropylmalate dehydrogenase D8X09_12610 PF00034 Cytochrome c D8X09_12620 PF17862 AAA+ lid domain D8X09_12620 PF01434 Peptidase family M41 D8X09_12620 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_12640 PF00675 Insulinase (Peptidase family M16) D8X09_12640 PF05193 Peptidase M16 inactive domain D8X09_12645 PF00684 DnaJ central domain D8X09_12645 PF01556 DnaJ C terminal domain D8X09_12645 PF00226 DnaJ domain D8X09_12650 PF00012 Hsp70 protein D8X09_12660 PF01025 GrpE D8X09_12670 PF00762 Ferrochelatase D8X09_12675 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D8X09_12675 PF01628 HrcA protein C terminal domain D8X09_12680 PF01513 ATP-NAD kinase D8X09_12685 PF02463 RecF/RecN/SMC N terminal domain D8X09_12690 PF01475 Ferric uptake regulator family D8X09_12695 PF04355 SmpA / OmlA family D8X09_12700 PF01113 Dihydrodipicolinate reductase, N-terminus D8X09_12700 PF05173 Dihydrodipicolinate reductase, C-terminus D8X09_12705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D8X09_12705 PF01565 FAD binding domain D8X09_12715 PF00561 alpha/beta hydrolase fold D8X09_12725 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_12730 PF00551 Formyl transferase D8X09_12740 PF17806 Sarcosine oxidase A3 domain D8X09_12740 PF01571 Aminomethyltransferase folate-binding domain D8X09_12740 PF08669 Glycine cleavage T-protein C-terminal barrel domain D8X09_12740 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_12745 PF04267 Sarcosine oxidase, delta subunit family D8X09_12750 PF01266 FAD dependent oxidoreductase D8X09_12760 PF03466 LysR substrate binding domain D8X09_12760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_12765 PF02615 Malate/L-lactate dehydrogenase D8X09_12770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D8X09_12770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D8X09_12775 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_12790 PF00437 Type II/IV secretion system protein D8X09_12795 PF00263 Bacterial type II and III secretion system protein D8X09_12795 PF13629 Pilus formation protein N terminal region D8X09_12795 PF04972 BON domain D8X09_12830 PF01557 Fumarylacetoacetate (FAA) hydrolase family D8X09_12835 PF00719 Inorganic pyrophosphatase D8X09_12855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D8X09_12855 PF03900 Porphobilinogen deaminase, C-terminal domain D8X09_12860 PF03741 Integral membrane protein TerC family D8X09_12865 PF03741 Integral membrane protein TerC family D8X09_12870 PF02629 CoA binding domain D8X09_12870 PF00549 CoA-ligase D8X09_12875 PF00549 CoA-ligase D8X09_12875 PF08442 ATP-grasp domain D8X09_12885 PF08267 Cobalamin-independent synthase, N-terminal domain D8X09_12885 PF01717 Cobalamin-independent synthase, Catalytic domain D8X09_12890 PF03466 LysR substrate binding domain D8X09_12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_12895 PF02631 RecX family D8X09_12900 PF00154 recA bacterial DNA recombination protein D8X09_12905 PF00486 Transcriptional regulatory protein, C terminal D8X09_12905 PF00072 Response regulator receiver domain D8X09_12910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_12910 PF08521 Two-component sensor kinase N-terminal D8X09_12910 PF00512 His Kinase A (phospho-acceptor) domain D8X09_12915 PF00083 Sugar (and other) transporter D8X09_12915 PF08946 Osmosensory transporter coiled coil D8X09_12920 PF00378 Enoyl-CoA hydratase/isomerase D8X09_12920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_12920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_12925 PF00005 ABC transporter D8X09_12925 PF08402 TOBE domain D8X09_12930 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_12940 PF00106 short chain dehydrogenase D8X09_12960 PF03466 LysR substrate binding domain D8X09_12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_12965 PF02515 CoA-transferase family III D8X09_12975 PF04381 Putative exonuclease, RdgC D8X09_12980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D8X09_12980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D8X09_13000 PF04231 Endonuclease I D8X09_13045 PF00216 Bacterial DNA-binding protein D8X09_13050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D8X09_13050 PF03483 B3/4 domain D8X09_13050 PF03147 Ferredoxin-fold anticodon binding domain D8X09_13050 PF01588 Putative tRNA binding domain D8X09_13050 PF03484 tRNA synthetase B5 domain D8X09_13055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D8X09_13055 PF01409 tRNA synthetases class II core domain (F) D8X09_13060 PF00453 Ribosomal protein L20 D8X09_13065 PF01632 Ribosomal protein L35 D8X09_13080 PF00692 dUTPase D8X09_13090 PF00392 Bacterial regulatory proteins, gntR family D8X09_13090 PF00155 Aminotransferase class I and II D8X09_13105 PF13847 Methyltransferase domain D8X09_13120 PF09335 SNARE associated Golgi protein D8X09_13150 PF00356 Bacterial regulatory proteins, lacI family D8X09_13155 PF00005 ABC transporter D8X09_13155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_13165 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_13170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_13175 PF07687 Peptidase dimerisation domain D8X09_13175 PF01546 Peptidase family M20/M25/M40 D8X09_13190 PF01810 LysE type translocator D8X09_13200 PF00155 Aminotransferase class I and II D8X09_13200 PF00392 Bacterial regulatory proteins, gntR family D8X09_13205 PF07690 Major Facilitator Superfamily D8X09_13210 PF00107 Zinc-binding dehydrogenase D8X09_13210 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_13225 PF03466 LysR substrate binding domain D8X09_13230 PF12833 Helix-turn-helix domain D8X09_13230 PF01965 DJ-1/PfpI family D8X09_13235 PF12706 Beta-lactamase superfamily domain D8X09_13255 PF00753 Metallo-beta-lactamase superfamily D8X09_13255 PF10996 Beta-Casp domain D8X09_13255 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D8X09_13260 PF00916 Sulfate permease family D8X09_13260 PF01740 STAS domain D8X09_13290 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_13295 PF00005 ABC transporter D8X09_13305 PF01979 Amidohydrolase family D8X09_13320 PF07690 Major Facilitator Superfamily D8X09_13330 PF13657 HipA N-terminal domain D8X09_13330 PF07804 HipA-like C-terminal domain D8X09_13345 PF00117 Glutamine amidotransferase class-I D8X09_13345 PF02540 NAD synthase D8X09_13345 PF00958 GMP synthase C terminal domain D8X09_13350 PF00571 CBS domain D8X09_13350 PF00478 IMP dehydrogenase / GMP reductase domain D8X09_13390 PF00149 Calcineurin-like phosphoesterase D8X09_13390 PF12320 Type 5 capsule protein repressor C-terminal domain D8X09_13395 PF01266 FAD dependent oxidoreductase D8X09_13400 PF01037 Lrp/AsnC ligand binding domain D8X09_13425 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_13435 PF17912 MalK OB fold domain D8X09_13435 PF00005 ABC transporter D8X09_13440 PF00455 DeoR C terminal sensor domain D8X09_13440 PF08220 DeoR-like helix-turn-helix domain D8X09_13445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D8X09_13445 PF01266 FAD dependent oxidoreductase D8X09_13460 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_13465 PF00890 FAD binding domain D8X09_13465 PF14537 Cytochrome c3 D8X09_13490 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_13495 PF00701 Dihydrodipicolinate synthetase family D8X09_13515 PF00472 RF-1 domain D8X09_13525 PF01242 6-pyruvoyl tetrahydropterin synthase D8X09_13530 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_13535 PF00596 Class II Aldolase and Adducin N-terminal domain D8X09_13565 PF05594 Haemagluttinin repeat D8X09_13565 PF13332 Hemagglutinin repeat D8X09_13565 PF05860 haemagglutination activity domain D8X09_13565 PF13018 Extended Signal Peptide of Type V secretion system D8X09_13570 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D8X09_13570 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D8X09_13570 PF02769 AIR synthase related protein, C-terminal domain D8X09_13575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D8X09_13580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_13585 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_13605 PF16970 Type-1 fimbrial protein, A D8X09_13615 PF03061 Thioesterase superfamily D8X09_13620 PF00378 Enoyl-CoA hydratase/isomerase D8X09_13625 PF00171 Aldehyde dehydrogenase family D8X09_13645 PF01883 Iron-sulfur cluster assembly protein D8X09_13650 PF05138 Phenylacetic acid catabolic protein D8X09_13655 PF06243 Phenylacetic acid degradation B D8X09_13660 PF05138 Phenylacetic acid catabolic protein D8X09_13665 PF07848 PaaX-like protein D8X09_13665 PF08223 PaaX-like protein C-terminal domain D8X09_13670 PF03853 YjeF-related protein N-terminus D8X09_13675 PF00929 Exonuclease D8X09_13680 PF01435 Peptidase family M48 D8X09_13685 PF03193 RsgA GTPase D8X09_13700 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_13705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_13715 PF03466 LysR substrate binding domain D8X09_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_13740 PF00543 Nitrogen regulatory protein P-II D8X09_13745 PF02540 NAD synthase D8X09_13745 PF00795 Carbon-nitrogen hydrolase D8X09_13750 PF00924 Mechanosensitive ion channel D8X09_13755 PF14698 Argininosuccinate lyase C-terminal D8X09_13755 PF00206 Lyase D8X09_13775 PF04055 Radical SAM superfamily D8X09_13775 PF06463 Molybdenum Cofactor Synthesis C D8X09_13780 PF00994 Probable molybdopterin binding domain D8X09_13780 PF03454 MoeA C-terminal region (domain IV) D8X09_13780 PF03453 MoeA N-terminal region (domain I and II) D8X09_13785 PF00994 Probable molybdopterin binding domain D8X09_13790 PF02391 MoaE protein D8X09_13800 PF01967 MoaC family D8X09_13810 PF01738 Dienelactone hydrolase family D8X09_13820 PF08534 Redoxin D8X09_13835 PF04055 Radical SAM superfamily D8X09_13835 PF06968 Biotin and Thiamin Synthesis associated domain D8X09_13855 PF00403 Heavy-metal-associated domain D8X09_13860 PF13411 MerR HTH family regulatory protein D8X09_13885 PF02104 SURF1 family D8X09_13890 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D8X09_13895 PF00510 Cytochrome c oxidase subunit III D8X09_13900 PF00115 Cytochrome C and Quinol oxidase polypeptide I D8X09_13910 PF00083 Sugar (and other) transporter D8X09_13910 PF07690 Major Facilitator Superfamily D8X09_13925 PF04380 Membrane fusogenic activity D8X09_13930 PF00543 Nitrogen regulatory protein P-II D8X09_13945 PF00440 Bacterial regulatory proteins, tetR family D8X09_13950 PF07690 Major Facilitator Superfamily D8X09_13955 PF00005 ABC transporter D8X09_13960 PF00005 ABC transporter D8X09_13960 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_13965 PF11862 Domain of unknown function (DUF3382) D8X09_13965 PF02653 Branched-chain amino acid transport system / permease component D8X09_13970 PF02653 Branched-chain amino acid transport system / permease component D8X09_13975 PF13458 Periplasmic binding protein D8X09_13985 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D8X09_13985 PF00171 Aldehyde dehydrogenase family D8X09_13985 PF01619 Proline dehydrogenase D8X09_13985 PF14850 DNA-binding domain of Proline dehydrogenase D8X09_13995 PF02470 MlaD protein D8X09_14000 PF04403 Paraquat-inducible protein A D8X09_14005 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_14005 PF02861 Clp amino terminal domain, pathogenicity island component D8X09_14005 PF17871 AAA lid domain D8X09_14005 PF07724 AAA domain (Cdc48 subfamily) D8X09_14005 PF10431 C-terminal, D2-small domain, of ClpB protein D8X09_14010 PF00905 Penicillin binding protein transpeptidase domain D8X09_14010 PF06832 Penicillin-Binding Protein C-terminus Family D8X09_14010 PF00912 Transglycosylase D8X09_14015 PF01835 MG2 domain D8X09_14015 PF17962 Bacterial macroglobulin domain 6 D8X09_14015 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D8X09_14015 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D8X09_14015 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D8X09_14015 PF07703 Alpha-2-macroglobulin bait region domain D8X09_14015 PF00207 Alpha-2-macroglobulin family D8X09_14015 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D8X09_14020 PF02617 ATP-dependent Clp protease adaptor protein ClpS D8X09_14025 PF00313 'Cold-shock' DNA-binding domain D8X09_14035 PF02803 Thiolase, C-terminal domain D8X09_14035 PF00108 Thiolase, N-terminal domain D8X09_14040 PF00654 Voltage gated chloride channel D8X09_14045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D8X09_14045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D8X09_14050 PF13742 OB-fold nucleic acid binding domain D8X09_14050 PF02601 Exonuclease VII, large subunit D8X09_14060 PF01618 MotA/TolQ/ExbB proton channel family D8X09_14065 PF02472 Biopolymer transport protein ExbD/TolR D8X09_14070 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D8X09_14075 PF03966 Trm112p-like protein D8X09_14080 PF02348 Cytidylyltransferase D8X09_14085 PF05191 Adenylate kinase, active site lid D8X09_14090 PF00106 short chain dehydrogenase D8X09_14095 PF03023 Lipid II flippase MurJ D8X09_14105 PF01649 Ribosomal protein S20 D8X09_14110 PF03328 HpcH/HpaI aldolase/citrate lyase family D8X09_14140 PF02615 Malate/L-lactate dehydrogenase D8X09_14155 PF14821 Threonine synthase N terminus D8X09_14155 PF00291 Pyridoxal-phosphate dependent enzyme D8X09_14160 PF01842 ACT domain D8X09_14160 PF00742 Homoserine dehydrogenase D8X09_14160 PF03447 Homoserine dehydrogenase, NAD binding domain D8X09_14165 PF00155 Aminotransferase class I and II D8X09_14170 PF04430 Protein of unknown function (DUF498/DUF598) D8X09_14175 PF00578 AhpC/TSA family D8X09_14180 PF13638 PIN domain D8X09_14180 PF02562 PhoH-like protein D8X09_14185 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D8X09_14190 PF13593 SBF-like CPA transporter family (DUF4137) D8X09_14195 PF00772 DnaB-like helicase N terminal domain D8X09_14195 PF03796 DnaB-like helicase C terminal domain D8X09_14205 PF03948 Ribosomal protein L9, C-terminal domain D8X09_14205 PF01281 Ribosomal protein L9, N-terminal domain D8X09_14210 PF01084 Ribosomal protein S18 D8X09_14220 PF01250 Ribosomal protein S6 D8X09_14225 PF02649 Type I GTP cyclohydrolase folE2 D8X09_14230 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D8X09_14230 PF02779 Transketolase, pyrimidine binding domain D8X09_14230 PF02780 Transketolase, C-terminal domain D8X09_14235 PF00348 Polyprenyl synthetase D8X09_14240 PF02609 Exonuclease VII small subunit D8X09_14250 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_14270 PF00571 CBS domain D8X09_14270 PF03448 MgtE intracellular N domain D8X09_14270 PF01769 Divalent cation transporter D8X09_14275 PF03061 Thioesterase superfamily D8X09_14280 PF03601 Conserved hypothetical protein 698 D8X09_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_14285 PF03466 LysR substrate binding domain D8X09_14290 PF01546 Peptidase family M20/M25/M40 D8X09_14290 PF07687 Peptidase dimerisation domain D8X09_14295 PF00501 AMP-binding enzyme D8X09_14295 PF13193 AMP-binding enzyme C-terminal domain D8X09_14310 PF00459 Inositol monophosphatase family D8X09_14320 PF01055 Glycosyl hydrolases family 31 D8X09_14320 PF13802 Galactose mutarotase-like D8X09_14325 PF09383 NIL domain D8X09_14325 PF00005 ABC transporter D8X09_14330 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_14335 PF03180 NLPA lipoprotein D8X09_14350 PF00465 Iron-containing alcohol dehydrogenase D8X09_14380 PF00392 Bacterial regulatory proteins, gntR family D8X09_14380 PF07729 FCD domain D8X09_14385 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_14405 PF14785 Maltose transport system permease protein MalF P2 domain D8X09_14405 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_14410 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_14415 PF08402 TOBE domain D8X09_14415 PF00005 ABC transporter D8X09_14430 PF01547 Bacterial extracellular solute-binding protein D8X09_14445 PF00376 MerR family regulatory protein D8X09_14445 PF09278 MerR, DNA binding D8X09_14450 PF03352 Methyladenine glycosylase D8X09_14455 PF05170 AsmA family D8X09_14465 PF00440 Bacterial regulatory proteins, tetR family D8X09_14530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_14530 PF03466 LysR substrate binding domain D8X09_14535 PF02548 Ketopantoate hydroxymethyltransferase D8X09_14540 PF13609 Gram-negative porin D8X09_14560 PF00083 Sugar (and other) transporter D8X09_14570 PF03466 LysR substrate binding domain D8X09_14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_14575 PF00155 Aminotransferase class I and II D8X09_14580 PF01966 HD domain D8X09_14585 PF00403 Heavy-metal-associated domain D8X09_14605 PF00107 Zinc-binding dehydrogenase D8X09_14605 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_14620 PF00005 ABC transporter D8X09_14625 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_14635 PF00501 AMP-binding enzyme D8X09_14635 PF13193 AMP-binding enzyme C-terminal domain D8X09_14645 PF01037 Lrp/AsnC ligand binding domain D8X09_14645 PF13404 AsnC-type helix-turn-helix domain D8X09_14650 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_14655 PF00677 Lumazine binding domain D8X09_14660 PF01425 Amidase D8X09_14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_14675 PF03466 LysR substrate binding domain D8X09_14680 PF07690 Major Facilitator Superfamily D8X09_14685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D8X09_14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_14695 PF03466 LysR substrate binding domain D8X09_14715 PF00005 ABC transporter D8X09_14730 PF02653 Branched-chain amino acid transport system / permease component D8X09_14735 PF01042 Endoribonuclease L-PSP D8X09_14740 PF13193 AMP-binding enzyme C-terminal domain D8X09_14740 PF00501 AMP-binding enzyme D8X09_14750 PF09339 IclR helix-turn-helix domain D8X09_14750 PF01614 Bacterial transcriptional regulator D8X09_14765 PF00005 ABC transporter D8X09_14770 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_14785 PF00378 Enoyl-CoA hydratase/isomerase D8X09_14790 PF02515 CoA-transferase family III D8X09_14795 PF01425 Amidase D8X09_14805 PF07729 FCD domain D8X09_14805 PF00392 Bacterial regulatory proteins, gntR family D8X09_14815 PF01594 AI-2E family transporter D8X09_14835 PF01322 Cytochrome C' D8X09_14840 PF08328 Adenylosuccinate lyase C-terminal D8X09_14840 PF00206 Lyase D8X09_14845 PF00043 Glutathione S-transferase, C-terminal domain D8X09_14845 PF13417 Glutathione S-transferase, N-terminal domain D8X09_14850 PF01925 Sulfite exporter TauE/SafE D8X09_14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_14860 PF03466 LysR substrate binding domain D8X09_14865 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_14875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D8X09_14875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D8X09_14885 PF02233 NAD(P) transhydrogenase beta subunit D8X09_14895 PF00593 TonB dependent receptor D8X09_14895 PF07715 TonB-dependent Receptor Plug Domain D8X09_14900 PF00756 Putative esterase D8X09_14905 PF13183 4Fe-4S dicluster domain D8X09_14905 PF02754 Cysteine-rich domain D8X09_14910 PF01565 FAD binding domain D8X09_14915 PF01565 FAD binding domain D8X09_14915 PF02913 FAD linked oxidases, C-terminal domain D8X09_14920 PF02913 FAD linked oxidases, C-terminal domain D8X09_14920 PF01565 FAD binding domain D8X09_14925 PF05594 Haemagluttinin repeat D8X09_14925 PF13018 Extended Signal Peptide of Type V secretion system D8X09_14925 PF05860 haemagglutination activity domain D8X09_14925 PF13332 Hemagglutinin repeat D8X09_14925 PF05594 Haemagluttinin repeat D8X09_14925 PF13018 Extended Signal Peptide of Type V secretion system D8X09_14925 PF05860 haemagglutination activity domain D8X09_14925 PF13332 Hemagglutinin repeat D8X09_14930 PF00793 DAHP synthetase I family D8X09_14935 PF01523 Putative modulator of DNA gyrase D8X09_14940 PF00795 Carbon-nitrogen hydrolase D8X09_14960 PF04542 Sigma-70 region 2 D8X09_14960 PF08281 Sigma-70, region 4 D8X09_14970 PF04461 Protein of unknown function (DUF520) D8X09_14985 PF01476 LysM domain D8X09_14985 PF01551 Peptidase family M23 D8X09_15000 PF07715 TonB-dependent Receptor Plug Domain D8X09_15000 PF00593 TonB dependent receptor D8X09_15015 PF05114 Protein of unknown function (DUF692) D8X09_15035 PF01022 Bacterial regulatory protein, arsR family D8X09_15040 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D8X09_15045 PF00510 Cytochrome c oxidase subunit III D8X09_15050 PF00115 Cytochrome C and Quinol oxidase polypeptide I D8X09_15055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D8X09_15055 PF06481 COX Aromatic Rich Motif D8X09_15060 PF00072 Response regulator receiver domain D8X09_15075 PF05726 Pirin C-terminal cupin domain D8X09_15075 PF02678 Pirin D8X09_15095 PF02515 CoA-transferase family III D8X09_15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_15100 PF03466 LysR substrate binding domain D8X09_15105 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_15115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_15115 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_15115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_15115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_15115 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_15115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_15135 PF01872 RibD C-terminal domain D8X09_15135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D8X09_15150 PF03477 ATP cone domain D8X09_15155 PF00464 Serine hydroxymethyltransferase D8X09_15165 PF00579 tRNA synthetases class I (W and Y) D8X09_15165 PF01479 S4 domain D8X09_15175 PF01551 Peptidase family M23 D8X09_15175 PF08460 Bacterial SH3 domain D8X09_15180 PF03702 Anhydro-N-acetylmuramic acid kinase D8X09_15185 PF01521 Iron-sulphur cluster biosynthesis D8X09_15195 PF01118 Semialdehyde dehydrogenase, NAD binding domain D8X09_15195 PF02774 Semialdehyde dehydrogenase, dimerisation domain D8X09_15200 PF00380 Ribosomal protein S9/S16 D8X09_15205 PF00572 Ribosomal protein L13 D8X09_15210 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_15215 PF01523 Putative modulator of DNA gyrase D8X09_15220 PF04751 Protein of unknown function (DUF615) D8X09_15225 PF02230 Phospholipase/Carboxylesterase D8X09_15235 PF00005 ABC transporter D8X09_15240 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_15245 PF00857 Isochorismatase family D8X09_15250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D8X09_15255 PF00270 DEAD/DEAH box helicase D8X09_15255 PF03880 DbpA RNA binding domain D8X09_15255 PF00271 Helicase conserved C-terminal domain D8X09_15265 PF00392 Bacterial regulatory proteins, gntR family D8X09_15265 PF07729 FCD domain D8X09_15280 PF13607 Succinyl-CoA ligase like flavodoxin domain D8X09_15280 PF13380 CoA binding domain D8X09_15280 PF00583 Acetyltransferase (GNAT) family D8X09_15285 PF00749 tRNA synthetases class I (E and Q), catalytic domain D8X09_15300 PF01037 Lrp/AsnC ligand binding domain D8X09_15315 PF03477 ATP cone domain D8X09_15315 PF00317 Ribonucleotide reductase, all-alpha domain D8X09_15315 PF02867 Ribonucleotide reductase, barrel domain D8X09_15320 PF00268 Ribonucleotide reductase, small chain D8X09_15335 PF13193 AMP-binding enzyme C-terminal domain D8X09_15335 PF00501 AMP-binding enzyme D8X09_15340 PF03062 MBOAT, membrane-bound O-acyltransferase family D8X09_15365 PF00294 pfkB family carbohydrate kinase D8X09_15380 PF02785 Biotin carboxylase C-terminal domain D8X09_15380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D8X09_15380 PF00289 Biotin carboxylase, N-terminal domain D8X09_15385 PF00364 Biotin-requiring enzyme D8X09_15390 PF01220 Dehydroquinase class II D8X09_15395 PF08534 Redoxin D8X09_15400 PF02875 Mur ligase family, glutamate ligase domain D8X09_15400 PF08245 Mur ligase middle domain D8X09_15400 PF01225 Mur ligase family, catalytic domain D8X09_15405 PF05728 Uncharacterised protein family (UPF0227) D8X09_15410 PF00773 RNB domain D8X09_15420 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D8X09_15420 PF01488 Shikimate / quinate 5-dehydrogenase D8X09_15420 PF08501 Shikimate dehydrogenase substrate binding domain D8X09_15430 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D8X09_15440 PF01037 Lrp/AsnC ligand binding domain D8X09_15445 PF01266 FAD dependent oxidoreductase D8X09_15450 PF00106 short chain dehydrogenase D8X09_15460 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_15470 PF02810 SEC-C motif D8X09_15470 PF07516 SecA Wing and Scaffold domain D8X09_15470 PF01043 SecA preprotein cross-linking domain D8X09_15470 PF07517 SecA DEAD-like domain D8X09_15475 PF01476 LysM domain D8X09_15475 PF08525 Opacity-associated protein A N-terminal motif D8X09_15475 PF01551 Peptidase family M23 D8X09_15485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D8X09_15490 PF12327 FtsZ family, C-terminal domain D8X09_15490 PF00091 Tubulin/FtsZ family, GTPase domain D8X09_15495 PF02491 SHS2 domain inserted in FTSA D8X09_15500 PF08478 POTRA domain, FtsQ-type D8X09_15500 PF03799 Cell division protein FtsQ D8X09_15505 PF01820 D-ala D-ala ligase N-terminus D8X09_15505 PF07478 D-ala D-ala ligase C-terminus D8X09_15510 PF01225 Mur ligase family, catalytic domain D8X09_15510 PF02875 Mur ligase family, glutamate ligase domain D8X09_15510 PF08245 Mur ligase middle domain D8X09_15515 PF04101 Glycosyltransferase family 28 C-terminal domain D8X09_15515 PF03033 Glycosyltransferase family 28 N-terminal domain D8X09_15520 PF01098 Cell cycle protein D8X09_15525 PF08245 Mur ligase middle domain D8X09_15525 PF02875 Mur ligase family, glutamate ligase domain D8X09_15530 PF00953 Glycosyl transferase family 4 D8X09_15535 PF02875 Mur ligase family, glutamate ligase domain D8X09_15535 PF08245 Mur ligase middle domain D8X09_15540 PF03717 Penicillin-binding Protein dimerisation domain D8X09_15540 PF00905 Penicillin binding protein transpeptidase domain D8X09_15545 PF04999 Cell division protein FtsL D8X09_15550 PF01795 MraW methylase family D8X09_15555 PF02381 MraZ protein, putative antitoxin-like D8X09_15570 PF01979 Amidohydrolase family D8X09_15575 PF01546 Peptidase family M20/M25/M40 D8X09_15575 PF07687 Peptidase dimerisation domain D8X09_15615 PF01037 Lrp/AsnC ligand binding domain D8X09_15620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D8X09_15625 PF01625 Peptide methionine sulfoxide reductase D8X09_15630 PF00034 Cytochrome c D8X09_15635 PF00920 Dehydratase family D8X09_15640 PF01790 Prolipoprotein diacylglyceryl transferase D8X09_15685 PF01970 Tripartite tricarboxylate transporter TctA family D8X09_15695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D8X09_15695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D8X09_15710 PF01923 Cobalamin adenosyltransferase D8X09_15725 PF10431 C-terminal, D2-small domain, of ClpB protein D8X09_15725 PF07724 AAA domain (Cdc48 subfamily) D8X09_15725 PF00004 ATPase family associated with various cellular activities (AAA) D8X09_15730 PF00227 Proteasome subunit D8X09_15735 PF01258 Prokaryotic dksA/traR C4-type zinc finger D8X09_15740 PF07683 Cobalamin synthesis protein cobW C-terminal domain D8X09_15740 PF02492 CobW/HypB/UreG, nucleotide-binding domain D8X09_15745 PF01475 Ferric uptake regulator family D8X09_15755 PF00005 ABC transporter D8X09_15760 PF00950 ABC 3 transport family D8X09_15765 PF01297 Zinc-uptake complex component A periplasmic D8X09_15775 PF03824 High-affinity nickel-transport protein D8X09_15780 PF07715 TonB-dependent Receptor Plug Domain D8X09_15780 PF00593 TonB dependent receptor D8X09_15785 PF00589 Phage integrase family D8X09_15785 PF02899 Phage integrase, N-terminal SAM-like domain D8X09_15795 PF01678 Diaminopimelate epimerase D8X09_15800 PF03279 Bacterial lipid A biosynthesis acyltransferase D8X09_15810 PF00438 S-adenosylmethionine synthetase, N-terminal domain D8X09_15810 PF02773 S-adenosylmethionine synthetase, C-terminal domain D8X09_15810 PF02772 S-adenosylmethionine synthetase, central domain D8X09_15820 PF00534 Glycosyl transferases group 1 D8X09_15820 PF13439 Glycosyltransferase Family 4 D8X09_15825 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D8X09_15825 PF05221 S-adenosyl-L-homocysteine hydrolase D8X09_15830 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D8X09_15835 PF02219 Methylenetetrahydrofolate reductase D8X09_15845 PF03466 LysR substrate binding domain D8X09_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_15850 PF00850 Histone deacetylase domain D8X09_15855 PF00083 Sugar (and other) transporter D8X09_15855 PF07690 Major Facilitator Superfamily D8X09_15865 PF14718 Soluble lytic murein transglycosylase L domain D8X09_15865 PF01464 Transglycosylase SLT domain D8X09_15870 PF12627 Probable RNA and SrmB- binding site of polymerase A D8X09_15870 PF01743 Poly A polymerase head domain D8X09_15880 PF00270 DEAD/DEAH box helicase D8X09_15880 PF00271 Helicase conserved C-terminal domain D8X09_15885 PF03167 Uracil DNA glycosylase superfamily D8X09_15895 PF13091 PLD-like domain D8X09_15900 PF00005 ABC transporter D8X09_15900 PF03459 TOBE domain D8X09_15905 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_15915 PF00561 alpha/beta hydrolase fold D8X09_15970 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_15985 PF01266 FAD dependent oxidoreductase D8X09_16015 PF17938 Tetracyclin repressor-like, C-terminal domain D8X09_16015 PF00440 Bacterial regulatory proteins, tetR family D8X09_16030 PF00486 Transcriptional regulatory protein, C terminal D8X09_16030 PF00072 Response regulator receiver domain D8X09_16040 PF12951 Passenger-associated-transport-repeat D8X09_16080 PF13175 AAA ATPase domain D8X09_16085 PF01555 DNA methylase D8X09_16105 PF13356 Arm DNA-binding domain D8X09_16105 PF00589 Phage integrase family D8X09_16110 PF06071 Protein of unknown function (DUF933) D8X09_16110 PF01926 50S ribosome-binding GTPase D8X09_16120 PF01195 Peptidyl-tRNA hydrolase D8X09_16125 PF14693 Ribosomal protein TL5, C-terminal domain D8X09_16125 PF01386 Ribosomal L25p family D8X09_16130 PF14572 Phosphoribosyl synthetase-associated domain D8X09_16130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D8X09_16140 PF08544 GHMP kinases C terminal D8X09_16140 PF00288 GHMP kinases N terminal domain D8X09_16145 PF03550 Outer membrane lipoprotein LolB D8X09_16155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D8X09_16155 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D8X09_16155 PF06827 Zinc finger found in FPG and IleRS D8X09_16165 PF01494 FAD binding domain D8X09_16175 PF03466 LysR substrate binding domain D8X09_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_16180 PF04209 homogentisate 1,2-dioxygenase D8X09_16190 PF00884 Sulfatase D8X09_16195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_16195 PF00512 His Kinase A (phospho-acceptor) domain D8X09_16195 PF08521 Two-component sensor kinase N-terminal D8X09_16200 PF00072 Response regulator receiver domain D8X09_16200 PF00486 Transcriptional regulatory protein, C terminal D8X09_16205 PF02913 FAD linked oxidases, C-terminal domain D8X09_16205 PF01565 FAD binding domain D8X09_16215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D8X09_16215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D8X09_16215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D8X09_16215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D8X09_16220 PF00342 Phosphoglucose isomerase D8X09_16225 PF13477 Glycosyl transferase 4-like D8X09_16225 PF00534 Glycosyl transferases group 1 D8X09_16230 PF00534 Glycosyl transferases group 1 D8X09_16230 PF13439 Glycosyltransferase Family 4 D8X09_16235 PF00534 Glycosyl transferases group 1 D8X09_16235 PF13439 Glycosyltransferase Family 4 D8X09_16240 PF13537 Glutamine amidotransferase domain D8X09_16240 PF00733 Asparagine synthase D8X09_16245 PF13439 Glycosyltransferase Family 4 D8X09_16245 PF00534 Glycosyl transferases group 1 D8X09_16250 PF03023 Lipid II flippase MurJ D8X09_16255 PF01370 NAD dependent epimerase/dehydratase family D8X09_16260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D8X09_16260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D8X09_16260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D8X09_16265 PF00953 Glycosyl transferase family 4 D8X09_16270 PF03232 Ubiquinone biosynthesis protein COQ7 D8X09_16280 PF00303 Thymidylate synthase D8X09_16285 PF00186 Dihydrofolate reductase D8X09_16290 PF00392 Bacterial regulatory proteins, gntR family D8X09_16290 PF00155 Aminotransferase class I and II D8X09_16295 PF00202 Aminotransferase class-III D8X09_16305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_16310 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_16315 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_16325 PF07364 Metallopeptidase family M81 D8X09_16325 PF07171 MlrC C-terminus D8X09_16335 PF02492 CobW/HypB/UreG, nucleotide-binding domain D8X09_16340 PF01730 UreF D8X09_16345 PF05194 UreE urease accessory protein, C-terminal domain D8X09_16345 PF02814 UreE urease accessory protein, N-terminal domain D8X09_16350 PF01979 Amidohydrolase family D8X09_16350 PF00449 Urease alpha-subunit, N-terminal domain D8X09_16355 PF00699 Urease beta subunit D8X09_16360 PF04955 HupE / UreJ protein D8X09_16365 PF00547 Urease, gamma subunit D8X09_16370 PF01774 UreD urease accessory protein D8X09_16375 PF09278 MerR, DNA binding D8X09_16375 PF00376 MerR family regulatory protein D8X09_16395 PF00392 Bacterial regulatory proteins, gntR family D8X09_16395 PF07702 UTRA domain D8X09_16400 PF07476 Methylaspartate ammonia-lyase C-terminus D8X09_16400 PF05034 Methylaspartate ammonia-lyase N-terminus D8X09_16405 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_16420 PF04293 SpoVR like protein D8X09_16425 PF04285 Protein of unknown function (DUF444) D8X09_16445 PF02515 CoA-transferase family III D8X09_16450 PF14535 AMP-binding enzyme C-terminal domain D8X09_16450 PF00501 AMP-binding enzyme D8X09_16455 PF08361 MAATS-type transcriptional repressor, C-terminal region D8X09_16455 PF00440 Bacterial regulatory proteins, tetR family D8X09_16460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_16460 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_16460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_16470 PF02653 Branched-chain amino acid transport system / permease component D8X09_16475 PF00005 ABC transporter D8X09_16480 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_16480 PF00005 ABC transporter D8X09_16490 PF00106 short chain dehydrogenase D8X09_16495 PF00378 Enoyl-CoA hydratase/isomerase D8X09_16560 PF00075 RNase H D8X09_16565 PF08241 Methyltransferase domain D8X09_16575 PF01476 LysM domain D8X09_16575 PF01464 Transglycosylase SLT domain D8X09_16595 PF04391 Protein of unknown function (DUF533) D8X09_16600 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_16615 PF00486 Transcriptional regulatory protein, C terminal D8X09_16615 PF00072 Response regulator receiver domain D8X09_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_16620 PF02702 Osmosensitive K+ channel His kinase sensor domain D8X09_16620 PF13493 Domain of unknown function (DUF4118) D8X09_16630 PF01654 Cytochrome bd terminal oxidase subunit I D8X09_16635 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D8X09_16635 PF00749 tRNA synthetases class I (E and Q), catalytic domain D8X09_16640 PF05209 Septum formation inhibitor MinC, N-terminal domain D8X09_16640 PF03775 Septum formation inhibitor MinC, C-terminal domain D8X09_16645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D8X09_16650 PF03776 Septum formation topological specificity factor MinE D8X09_16685 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_16690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_16695 PF00535 Glycosyl transferase family 2 D8X09_16700 PF03466 LysR substrate binding domain D8X09_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_16710 PF17755 UvrA DNA-binding domain D8X09_16710 PF00005 ABC transporter D8X09_16710 PF17760 UvrA interaction domain D8X09_16715 PF04715 Anthranilate synthase component I, N terminal region D8X09_16715 PF00425 chorismate binding enzyme D8X09_16720 PF01063 Amino-transferase class IV D8X09_16735 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_16740 PF00501 AMP-binding enzyme D8X09_16740 PF13193 AMP-binding enzyme C-terminal domain D8X09_16745 PF00392 Bacterial regulatory proteins, gntR family D8X09_16745 PF07702 UTRA domain D8X09_16750 PF00899 ThiF family D8X09_16755 PF07690 Major Facilitator Superfamily D8X09_16765 PF01243 Pyridoxamine 5'-phosphate oxidase D8X09_16765 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D8X09_16770 PF01613 Flavin reductase like domain D8X09_16780 PF00551 Formyl transferase D8X09_16785 PF03466 LysR substrate binding domain D8X09_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_16810 PF00218 Indole-3-glycerol phosphate synthase D8X09_16815 PF02885 Glycosyl transferase family, helical bundle domain D8X09_16815 PF00591 Glycosyl transferase family, a/b domain D8X09_16820 PF00117 Glutamine amidotransferase class-I D8X09_16825 PF00425 chorismate binding enzyme D8X09_16825 PF04715 Anthranilate synthase component I, N terminal region D8X09_16830 PF13419 Haloacid dehalogenase-like hydrolase D8X09_16840 PF04379 ApaG domain D8X09_16845 PF03562 MltA specific insert domain D8X09_16845 PF06725 3D domain D8X09_16850 PF01494 FAD binding domain D8X09_16855 PF10411 Disulfide bond isomerase protein N-terminus D8X09_16855 PF13098 Thioredoxin-like domain D8X09_16860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D8X09_16860 PF01842 ACT domain D8X09_16860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D8X09_16870 PF01171 PP-loop family D8X09_16880 PF13192 Thioredoxin domain D8X09_16880 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_16885 PF13180 PDZ domain D8X09_16885 PF17820 PDZ domain D8X09_16890 PF00378 Enoyl-CoA hydratase/isomerase D8X09_16915 PF00119 ATP synthase A chain D8X09_16920 PF00137 ATP synthase subunit C D8X09_16925 PF00430 ATP synthase B/B' CF(0) D8X09_16930 PF00213 ATP synthase delta (OSCP) subunit D8X09_16935 PF00306 ATP synthase alpha/beta chain, C terminal domain D8X09_16935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D8X09_16935 PF02874 ATP synthase alpha/beta family, beta-barrel domain D8X09_16940 PF00231 ATP synthase D8X09_16945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D8X09_16945 PF02874 ATP synthase alpha/beta family, beta-barrel domain D8X09_16950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D8X09_16960 PF01208 Uroporphyrinogen decarboxylase (URO-D) D8X09_16965 PF17764 3′ DNA-binding domain (3′BD) D8X09_16965 PF18074 Primosomal protein N C-terminal domain D8X09_16965 PF00270 DEAD/DEAH box helicase D8X09_16965 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D8X09_16965 PF00271 Helicase conserved C-terminal domain D8X09_16970 PF00580 UvrD/REP helicase N-terminal domain D8X09_16970 PF13361 UvrD-like helicase C-terminal domain D8X09_16980 PF07687 Peptidase dimerisation domain D8X09_16980 PF01546 Peptidase family M20/M25/M40 D8X09_16990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_16990 PF00005 ABC transporter D8X09_16995 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_16995 PF12911 N-terminal TM domain of oligopeptide transport permease C D8X09_17000 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_17020 PF01256 Carbohydrate kinase D8X09_17025 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17030 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17085 PF07732 Multicopper oxidase D8X09_17085 PF00394 Multicopper oxidase D8X09_17085 PF07731 Multicopper oxidase D8X09_17090 PF05275 Copper resistance protein B precursor (CopB) D8X09_17095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_17095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_17095 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17105 PF09339 IclR helix-turn-helix domain D8X09_17105 PF01614 Bacterial transcriptional regulator D8X09_17110 PF05995 Cysteine dioxygenase type I D8X09_17115 PF01425 Amidase D8X09_17120 PF13458 Periplasmic binding protein D8X09_17145 PF13091 PLD-like domain D8X09_17150 PF03372 Endonuclease/Exonuclease/phosphatase family D8X09_17155 PF01336 OB-fold nucleic acid binding domain D8X09_17155 PF00152 tRNA synthetases class II (D, K and N) D8X09_17155 PF02938 GAD domain D8X09_17190 PF01370 NAD dependent epimerase/dehydratase family D8X09_17190 PF02222 ATP-grasp domain D8X09_17195 PF00571 CBS domain D8X09_17195 PF01380 SIS domain D8X09_17215 PF00005 ABC transporter D8X09_17225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D8X09_17230 PF02603 HPr Serine kinase N terminus D8X09_17230 PF07475 HPr Serine kinase C-terminal domain D8X09_17235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D8X09_17235 PF00034 Cytochrome c D8X09_17235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D8X09_17245 PF03668 P-loop ATPase protein family D8X09_17250 PF03330 Lytic transglycolase D8X09_17250 PF05036 Sporulation related domain D8X09_17270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D8X09_17270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D8X09_17275 PF03450 CO dehydrogenase flavoprotein C-terminal domain D8X09_17275 PF00941 FAD binding domain in molybdopterin dehydrogenase D8X09_17280 PF09084 NMT1/THI5 like D8X09_17285 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17290 PF02441 Flavoprotein D8X09_17295 PF00462 Glutaredoxin D8X09_17300 PF05175 Methyltransferase small domain D8X09_17300 PF17827 PrmC N-terminal domain D8X09_17305 PF00472 RF-1 domain D8X09_17305 PF03462 PCRF domain D8X09_17310 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D8X09_17310 PF01488 Shikimate / quinate 5-dehydrogenase D8X09_17310 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D8X09_17335 PF01568 Molydopterin dinucleotide binding domain D8X09_17335 PF00384 Molybdopterin oxidoreductase D8X09_17350 PF13380 CoA binding domain D8X09_17350 PF13607 Succinyl-CoA ligase like flavodoxin domain D8X09_17350 PF00583 Acetyltransferase (GNAT) family D8X09_17355 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_17360 PF12806 Acetyl-CoA dehydrogenase C-terminal like D8X09_17360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_17360 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_17365 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D8X09_17365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D8X09_17370 PF00108 Thiolase, N-terminal domain D8X09_17370 PF02803 Thiolase, C-terminal domain D8X09_17375 PF01037 Lrp/AsnC ligand binding domain D8X09_17380 PF01380 SIS domain D8X09_17385 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family D8X09_17390 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17400 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17405 PF13607 Succinyl-CoA ligase like flavodoxin domain D8X09_17405 PF13380 CoA binding domain D8X09_17405 PF00583 Acetyltransferase (GNAT) family D8X09_17410 PF03466 LysR substrate binding domain D8X09_17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_17415 PF00107 Zinc-binding dehydrogenase D8X09_17415 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_17425 PF01042 Endoribonuclease L-PSP D8X09_17435 PF07687 Peptidase dimerisation domain D8X09_17435 PF01546 Peptidase family M20/M25/M40 D8X09_17440 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_17445 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_17445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_17450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_17450 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_17450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_17455 PF01565 FAD binding domain D8X09_17455 PF09330 D-lactate dehydrogenase, membrane binding D8X09_17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_17460 PF03466 LysR substrate binding domain D8X09_17465 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17490 PF00701 Dihydrodipicolinate synthetase family D8X09_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_17495 PF03466 LysR substrate binding domain D8X09_17500 PF02515 CoA-transferase family III D8X09_17505 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17510 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_17510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_17510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_17515 PF01575 MaoC like domain D8X09_17530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D8X09_17530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D8X09_17535 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_17540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_17540 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_17545 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17560 PF00676 Dehydrogenase E1 component D8X09_17565 PF02779 Transketolase, pyrimidine binding domain D8X09_17565 PF02780 Transketolase, C-terminal domain D8X09_17570 PF00378 Enoyl-CoA hydratase/isomerase D8X09_17575 PF02817 e3 binding domain D8X09_17575 PF00364 Biotin-requiring enzyme D8X09_17575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D8X09_17580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D8X09_17580 PF02770 Acyl-CoA dehydrogenase, middle domain D8X09_17580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D8X09_17585 PF00501 AMP-binding enzyme D8X09_17585 PF13193 AMP-binding enzyme C-terminal domain D8X09_17595 PF13458 Periplasmic binding protein D8X09_17600 PF02653 Branched-chain amino acid transport system / permease component D8X09_17605 PF00005 ABC transporter D8X09_17605 PF12399 Branched-chain amino acid ATP-binding cassette transporter D8X09_17610 PF00005 ABC transporter D8X09_17615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D8X09_17615 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_17630 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17645 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17655 PF00899 ThiF family D8X09_17660 PF03572 Peptidase family S41 D8X09_17660 PF13180 PDZ domain D8X09_17665 PF01551 Peptidase family M23 D8X09_17670 PF00300 Histidine phosphatase superfamily (branch 1) D8X09_17680 PF00462 Glutaredoxin D8X09_17685 PF02556 Preprotein translocase subunit SecB D8X09_17690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D8X09_17690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D8X09_17695 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17700 PF00588 SpoU rRNA Methylase family D8X09_17710 PF08241 Methyltransferase domain D8X09_17715 PF04107 Glutamate-cysteine ligase family 2(GCS2) D8X09_17720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D8X09_17730 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_17735 PF00005 ABC transporter D8X09_17745 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_17745 PF01799 [2Fe-2S] binding domain D8X09_17750 PF00941 FAD binding domain in molybdopterin dehydrogenase D8X09_17750 PF03450 CO dehydrogenase flavoprotein C-terminal domain D8X09_17755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D8X09_17755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D8X09_17760 PF03480 Bacterial extracellular solute-binding protein, family 7 D8X09_17765 PF00355 Rieske [2Fe-2S] domain D8X09_17770 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_17770 PF14759 Reductase C-terminal D8X09_17775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D8X09_17775 PF00355 Rieske [2Fe-2S] domain D8X09_17785 PF00857 Isochorismatase family D8X09_17800 PF17645 Arylmalonate decarboxylase D8X09_17810 PF12804 MobA-like NTP transferase domain D8X09_17820 PF01047 MarR family D8X09_17825 PF02386 Cation transport protein D8X09_17830 PF02254 TrkA-N domain D8X09_17830 PF02080 TrkA-C domain D8X09_17835 PF00158 Sigma-54 interaction domain D8X09_17835 PF00072 Response regulator receiver domain D8X09_17835 PF02954 Bacterial regulatory protein, Fis family D8X09_17840 PF00672 HAMP domain D8X09_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_17840 PF00512 His Kinase A (phospho-acceptor) domain D8X09_17840 PF00989 PAS fold D8X09_17850 PF01189 16S rRNA methyltransferase RsmB/F D8X09_17850 PF01029 NusB family D8X09_17860 PF01958 Domain of unknown function DUF108 D8X09_17860 PF03447 Homoserine dehydrogenase, NAD binding domain D8X09_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_17895 PF03466 LysR substrate binding domain D8X09_17905 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_17915 PF00155 Aminotransferase class I and II D8X09_17920 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_17930 PF00682 HMGL-like D8X09_17935 PF02481 DNA recombination-mediator protein A D8X09_17935 PF17782 DprA winged helix domain D8X09_17940 PF01037 Lrp/AsnC ligand binding domain D8X09_17945 PF00266 Aminotransferase class-V D8X09_17950 PF01327 Polypeptide deformylase D8X09_17965 PF02911 Formyl transferase, C-terminal domain D8X09_17965 PF00551 Formyl transferase D8X09_17975 PF13419 Haloacid dehalogenase-like hydrolase D8X09_17985 PF03641 Possible lysine decarboxylase D8X09_17995 PF18693 TRAM domain D8X09_17995 PF00919 Uncharacterized protein family UPF0004 D8X09_17995 PF04055 Radical SAM superfamily D8X09_18000 PF01361 Tautomerase enzyme D8X09_18005 PF01266 FAD dependent oxidoreductase D8X09_18010 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18015 PF07729 FCD domain D8X09_18015 PF00392 Bacterial regulatory proteins, gntR family D8X09_18030 PF00202 Aminotransferase class-III D8X09_18035 PF00491 Arginase family D8X09_18045 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18050 PF02627 Carboxymuconolactone decarboxylase family D8X09_18055 PF00378 Enoyl-CoA hydratase/isomerase D8X09_18060 PF01614 Bacterial transcriptional regulator D8X09_18060 PF09339 IclR helix-turn-helix domain D8X09_18065 PF13193 AMP-binding enzyme C-terminal domain D8X09_18065 PF00501 AMP-binding enzyme D8X09_18070 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18080 PF12951 Passenger-associated-transport-repeat D8X09_18080 PF12951 Passenger-associated-transport-repeat D8X09_18110 PF14031 Putative serine dehydratase domain D8X09_18110 PF01168 Alanine racemase, N-terminal domain D8X09_18115 PF07411 Domain of unknown function (DUF1508) D8X09_18120 PF01145 SPFH domain / Band 7 family D8X09_18130 PF01042 Endoribonuclease L-PSP D8X09_18180 PF03837 RecT family D8X09_18215 PF00589 Phage integrase family D8X09_18235 PF03466 LysR substrate binding domain D8X09_18235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_18250 PF02096 60Kd inner membrane protein D8X09_18250 PF14849 YidC periplasmic domain D8X09_18255 PF01809 Putative membrane protein insertion efficiency factor D8X09_18260 PF00825 Ribonuclease P D8X09_18265 PF00468 Ribosomal protein L34 D8X09_18270 PF00308 Bacterial dnaA protein D8X09_18270 PF11638 DnaA N-terminal domain D8X09_18270 PF08299 Bacterial dnaA protein helix-turn-helix D8X09_18275 PF02768 DNA polymerase III beta subunit, C-terminal domain D8X09_18275 PF02767 DNA polymerase III beta subunit, central domain D8X09_18275 PF00712 DNA polymerase III beta subunit, N-terminal domain D8X09_18280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_18280 PF00204 DNA gyrase B D8X09_18280 PF01751 Toprim domain D8X09_18280 PF18053 DNA gyrase B subunit insert domain D8X09_18280 PF00986 DNA gyrase B subunit, carboxyl terminus D8X09_18285 PF09339 IclR helix-turn-helix domain D8X09_18285 PF01614 Bacterial transcriptional regulator D8X09_18290 PF01425 Amidase D8X09_18295 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18305 PF01070 FMN-dependent dehydrogenase D8X09_18330 PF09278 MerR, DNA binding D8X09_18330 PF00376 MerR family regulatory protein D8X09_18355 PF02803 Thiolase, C-terminal domain D8X09_18355 PF00108 Thiolase, N-terminal domain D8X09_18360 PF01039 Carboxyl transferase domain D8X09_18365 PF00364 Biotin-requiring enzyme D8X09_18365 PF00289 Biotin carboxylase, N-terminal domain D8X09_18365 PF02785 Biotin carboxylase C-terminal domain D8X09_18365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D8X09_18375 PF00202 Aminotransferase class-III D8X09_18380 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18385 PF14031 Putative serine dehydratase domain D8X09_18385 PF01168 Alanine racemase, N-terminal domain D8X09_18390 PF16868 NMT1-like family D8X09_18400 PF00593 TonB dependent receptor D8X09_18400 PF07715 TonB-dependent Receptor Plug Domain D8X09_18405 PF04361 Protein of unknown function (DUF494) D8X09_18420 PF01131 DNA topoisomerase D8X09_18420 PF01751 Toprim domain D8X09_18430 PF00005 ABC transporter D8X09_18435 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_18445 PF00171 Aldehyde dehydrogenase family D8X09_18455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D8X09_18455 PF00205 Thiamine pyrophosphate enzyme, central domain D8X09_18455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D8X09_18460 PF01037 Lrp/AsnC ligand binding domain D8X09_18465 PF01062 Bestrophin, RFP-TM, chloride channel D8X09_18475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D8X09_18490 PF02965 Vitamin B12 dependent methionine synthase, activation domain D8X09_18490 PF02574 Homocysteine S-methyltransferase D8X09_18490 PF00809 Pterin binding enzyme D8X09_18490 PF02310 B12 binding domain D8X09_18490 PF02607 B12 binding domain D8X09_18495 PF00593 TonB dependent receptor D8X09_18495 PF07715 TonB-dependent Receptor Plug Domain D8X09_18500 PF01497 Periplasmic binding protein D8X09_18505 PF05690 Thiazole biosynthesis protein ThiG D8X09_18510 PF08543 Phosphomethylpyrimidine kinase D8X09_18525 PF02321 Outer membrane efflux protein D8X09_18530 PF01467 Cytidylyltransferase-like D8X09_18540 PF01594 AI-2E family transporter D8X09_18550 PF02254 TrkA-N domain D8X09_18550 PF07885 Ion channel D8X09_18565 PF00164 Ribosomal protein S12/S23 D8X09_18570 PF00177 Ribosomal protein S7p/S5e D8X09_18575 PF14492 Elongation Factor G, domain II D8X09_18575 PF00679 Elongation factor G C-terminus D8X09_18575 PF03764 Elongation factor G, domain IV D8X09_18575 PF03144 Elongation factor Tu domain 2 D8X09_18575 PF00009 Elongation factor Tu GTP binding domain D8X09_18580 PF03143 Elongation factor Tu C-terminal domain D8X09_18580 PF03144 Elongation factor Tu domain 2 D8X09_18580 PF00009 Elongation factor Tu GTP binding domain D8X09_18585 PF00338 Ribosomal protein S10p/S20e D8X09_18590 PF00297 Ribosomal protein L3 D8X09_18595 PF00573 Ribosomal protein L4/L1 family D8X09_18600 PF00276 Ribosomal protein L23 D8X09_18605 PF03947 Ribosomal Proteins L2, C-terminal domain D8X09_18605 PF00181 Ribosomal Proteins L2, RNA binding domain D8X09_18610 PF00203 Ribosomal protein S19 D8X09_18615 PF00237 Ribosomal protein L22p/L17e D8X09_18620 PF00189 Ribosomal protein S3, C-terminal domain D8X09_18620 PF07650 KH domain D8X09_18625 PF00252 Ribosomal protein L16p/L10e D8X09_18630 PF00831 Ribosomal L29 protein D8X09_18635 PF00366 Ribosomal protein S17 D8X09_18645 PF00171 Aldehyde dehydrogenase family D8X09_18655 PF00238 Ribosomal protein L14p/L23e D8X09_18660 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D8X09_18665 PF00673 ribosomal L5P family C-terminus D8X09_18665 PF00281 Ribosomal protein L5 D8X09_18670 PF00253 Ribosomal protein S14p/S29e D8X09_18675 PF00410 Ribosomal protein S8 D8X09_18680 PF00347 Ribosomal protein L6 D8X09_18685 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D8X09_18690 PF03719 Ribosomal protein S5, C-terminal domain D8X09_18690 PF00333 Ribosomal protein S5, N-terminal domain D8X09_18695 PF00327 Ribosomal protein L30p/L7e D8X09_18700 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D8X09_18705 PF00344 SecY translocase D8X09_18710 PF01176 Translation initiation factor 1A / IF-1 D8X09_18715 PF00444 Ribosomal protein L36 D8X09_18720 PF00416 Ribosomal protein S13/S18 D8X09_18725 PF00411 Ribosomal protein S11 D8X09_18730 PF00163 Ribosomal protein S4/S9 N-terminal domain D8X09_18730 PF01479 S4 domain D8X09_18735 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D8X09_18735 PF01000 RNA polymerase Rpb3/RpoA insert domain D8X09_18735 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D8X09_18740 PF01196 Ribosomal protein L17 D8X09_18745 PF01230 HIT domain D8X09_18750 PF03091 CutA1 divalent ion tolerance protein D8X09_18755 PF02683 Cytochrome C biogenesis protein transmembrane region D8X09_18755 PF11412 Disulphide bond corrector protein DsbC D8X09_18760 PF00892 EamA-like transporter family D8X09_18765 PF00490 Delta-aminolevulinic acid dehydratase D8X09_18770 PF01926 50S ribosome-binding GTPase D8X09_18775 PF00034 Cytochrome c D8X09_18780 PF05140 ResB-like family D8X09_18785 PF01578 Cytochrome C assembly protein D8X09_18790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D8X09_18790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D8X09_18795 PF13627 Prokaryotic lipoprotein-attachment site D8X09_18800 PF01491 Frataxin-like domain D8X09_18805 PF17092 Penicillin-binding protein OB-like domain D8X09_18805 PF00912 Transglycosylase D8X09_18805 PF00905 Penicillin binding protein transpeptidase domain D8X09_18810 PF01202 Shikimate kinase D8X09_18815 PF01761 3-dehydroquinate synthase D8X09_18820 PF01966 HD domain D8X09_18820 PF13286 Phosphohydrolase-associated domain D8X09_18825 PF00043 Glutathione S-transferase, C-terminal domain D8X09_18825 PF13417 Glutathione S-transferase, N-terminal domain D8X09_18830 PF17755 UvrA DNA-binding domain D8X09_18830 PF17760 UvrA interaction domain D8X09_18835 PF07690 Major Facilitator Superfamily D8X09_18840 PF00436 Single-strand binding protein family D8X09_18845 PF00593 TonB dependent receptor D8X09_18845 PF07715 TonB-dependent Receptor Plug Domain D8X09_18855 PF03328 HpcH/HpaI aldolase/citrate lyase family D8X09_18865 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18875 PF03466 LysR substrate binding domain D8X09_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_18885 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_18890 PF00534 Glycosyl transferases group 1 D8X09_18890 PF13439 Glycosyltransferase Family 4 D8X09_18900 PF03466 LysR substrate binding domain D8X09_18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_18910 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_18915 PF00005 ABC transporter D8X09_18935 PF01274 Malate synthase D8X09_18955 PF01040 UbiA prenyltransferase family D8X09_18960 PF00155 Aminotransferase class I and II D8X09_18965 PF13185 GAF domain D8X09_18970 PF00701 Dihydrodipicolinate synthetase family D8X09_18985 PF01476 LysM domain D8X09_18985 PF04972 BON domain D8X09_18990 PF05690 Thiazole biosynthesis protein ThiG D8X09_18990 PF02597 ThiS family D8X09_18995 PF00561 alpha/beta hydrolase fold D8X09_19000 PF02390 Putative methyltransferase D8X09_19015 PF00682 HMGL-like D8X09_19020 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19040 PF00392 Bacterial regulatory proteins, gntR family D8X09_19040 PF07702 UTRA domain D8X09_19045 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19055 PF00392 Bacterial regulatory proteins, gntR family D8X09_19055 PF07702 UTRA domain D8X09_19060 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19070 PF00005 ABC transporter D8X09_19075 PF00378 Enoyl-CoA hydratase/isomerase D8X09_19080 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19085 PF00550 Phosphopantetheine attachment site D8X09_19085 PF16197 Ketoacyl-synthetase C-terminal extension D8X09_19085 PF08990 Erythronolide synthase docking D8X09_19085 PF08659 KR domain D8X09_19085 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_19085 PF14765 Polyketide synthase dehydratase D8X09_19085 PF00698 Acyl transferase domain D8X09_19085 PF02801 Beta-ketoacyl synthase, C-terminal domain D8X09_19085 PF00109 Beta-ketoacyl synthase, N-terminal domain D8X09_19090 PF02515 CoA-transferase family III D8X09_19095 PF00440 Bacterial regulatory proteins, tetR family D8X09_19100 PF09297 NADH pyrophosphatase zinc ribbon domain D8X09_19100 PF00293 NUDIX domain D8X09_19105 PF00111 2Fe-2S iron-sulfur cluster binding domain D8X09_19105 PF00175 Oxidoreductase NAD-binding domain D8X09_19105 PF00970 Oxidoreductase FAD-binding domain D8X09_19110 PF01425 Amidase D8X09_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D8X09_19120 PF03466 LysR substrate binding domain D8X09_19125 PF13458 Periplasmic binding protein D8X09_19135 PF00005 ABC transporter D8X09_19145 PF02653 Branched-chain amino acid transport system / permease component D8X09_19170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D8X09_19170 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D8X09_19185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D8X09_19185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D8X09_19185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D8X09_19190 PF07690 Major Facilitator Superfamily D8X09_19195 PF00132 Bacterial transferase hexapeptide (six repeats) D8X09_19195 PF14602 Hexapeptide repeat of succinyl-transferase D8X09_19195 PF12804 MobA-like NTP transferase domain D8X09_19215 PF02630 SCO1/SenC D8X09_19220 PF01040 UbiA prenyltransferase family D8X09_19225 PF02628 Cytochrome oxidase assembly protein D8X09_19245 PF00510 Cytochrome c oxidase subunit III D8X09_19260 PF00115 Cytochrome C and Quinol oxidase polypeptide I D8X09_19265 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D8X09_19265 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D8X09_19275 PF00999 Sodium/hydrogen exchanger family D8X09_19280 PF00149 Calcineurin-like phosphoesterase D8X09_19285 PF04542 Sigma-70 region 2 D8X09_19285 PF04545 Sigma-70, region 4 D8X09_19285 PF00140 Sigma-70 factor, region 1.2 D8X09_19295 PF00756 Putative esterase D8X09_19300 PF08240 Alcohol dehydrogenase GroES-like domain D8X09_19300 PF00107 Zinc-binding dehydrogenase D8X09_19310 PF04898 Glutamate synthase central domain D8X09_19310 PF00310 Glutamine amidotransferases class-II D8X09_19310 PF01645 Conserved region in glutamate synthase D8X09_19310 PF01493 GXGXG motif D8X09_19315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D8X09_19315 PF07992 Pyridine nucleotide-disulphide oxidoreductase D8X09_19320 PF03922 OmpW family D8X09_19325 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19330 PF00005 ABC transporter D8X09_19335 PF02405 Permease MlaE D8X09_19340 PF02470 MlaD protein D8X09_19345 PF04333 MlaA lipoprotein D8X09_19360 PF01061 ABC-2 type transporter D8X09_19370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D8X09_19375 PF01634 ATP phosphoribosyltransferase D8X09_19380 PF00815 Histidinol dehydrogenase D8X09_19385 PF00155 Aminotransferase class I and II D8X09_19390 PF00475 Imidazoleglycerol-phosphate dehydratase D8X09_19395 PF00117 Glutamine amidotransferase class-I D8X09_19400 PF00977 Histidine biosynthesis protein D8X09_19405 PF00977 Histidine biosynthesis protein D8X09_19410 PF01502 Phosphoribosyl-AMP cyclohydrolase D8X09_19415 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D8X09_19420 PF01230 HIT domain D8X09_19425 PF02416 mttA/Hcf106 family D8X09_19430 PF02416 mttA/Hcf106 family D8X09_19435 PF00902 Sec-independent protein translocase protein (TatC) D8X09_19445 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19450 PF02917 Pertussis toxin, subunit 1 D8X09_19455 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain D8X09_19455 PF03440 Aerolysin/Pertussis toxin (APT) domain D8X09_19460 PF09275 Pertussis toxin S4 subunit D8X09_19465 PF09276 Pertussis toxin S5 subunit D8X09_19470 PF03440 Aerolysin/Pertussis toxin (APT) domain D8X09_19470 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain D8X09_19475 PF04956 TrbC/VIRB2 family D8X09_19480 PF05101 Type IV secretory pathway, VirB3-like protein D8X09_19485 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D8X09_19490 PF04610 TrbL/VirB6 plasmid conjugal transfer protein D8X09_19500 PF04335 VirB8 protein D8X09_19505 PF03524 Conjugal transfer protein D8X09_19510 PF03743 Bacterial conjugation TrbI-like protein D8X09_19515 PF00437 Type II/IV secretion system protein D8X09_19525 PF00892 EamA-like transporter family D8X09_19545 PF12631 MnmE helical domain D8X09_19545 PF01926 50S ribosome-binding GTPase D8X09_19545 PF10396 GTP-binding protein TrmE N-terminus D8X09_19550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_19560 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19560 PF12911 N-terminal TM domain of oligopeptide transport permease C D8X09_19575 PF01960 ArgJ family D8X09_19585 PF00293 NUDIX domain D8X09_19610 PF02321 Outer membrane efflux protein D8X09_19615 PF00873 AcrB/AcrD/AcrF family D8X09_19620 PF00873 AcrB/AcrD/AcrF family D8X09_19625 PF13533 Biotin-lipoyl like D8X09_19630 PF07072 Cell division protein D8X09_19635 PF01121 Dephospho-CoA kinase D8X09_19640 PF06750 Bacterial Peptidase A24 N-terminal domain D8X09_19640 PF01478 Type IV leader peptidase family D8X09_19655 PF02569 Pantoate-beta-alanine ligase D8X09_19660 PF02616 Segregation and condensation protein ScpA D8X09_19670 PF07690 Major Facilitator Superfamily D8X09_19675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D8X09_19675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D8X09_19685 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19690 PF00005 ABC transporter D8X09_19695 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19700 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19705 PF00497 Bacterial extracellular solute-binding proteins, family 3 D8X09_19710 PF00005 ABC transporter D8X09_19715 PF18075 FtsX extracellular domain D8X09_19720 PF03975 CheD chemotactic sensory transduction D8X09_19730 PF00633 Helix-hairpin-helix motif D8X09_19730 PF00730 HhH-GPD superfamily base excision DNA repair protein D8X09_19730 PF14815 NUDIX domain D8X09_19730 PF10576 Iron-sulfur binding domain of endonuclease III D8X09_19740 PF08241 Methyltransferase domain D8X09_19750 PF02515 CoA-transferase family III D8X09_19755 PF02515 CoA-transferase family III D8X09_19765 PF03401 Tripartite tricarboxylate transporter family receptor D8X09_19770 PF00378 Enoyl-CoA hydratase/isomerase D8X09_19785 PF00682 HMGL-like D8X09_19790 PF00378 Enoyl-CoA hydratase/isomerase D8X09_19795 PF02515 CoA-transferase family III D8X09_19810 PF00199 Catalase D8X09_19810 PF06628 Catalase-related immune-responsive D8X09_19815 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19820 PF00005 ABC transporter D8X09_19830 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D8X09_19835 PF07687 Peptidase dimerisation domain D8X09_19835 PF01546 Peptidase family M20/M25/M40 D8X09_19840 PF00005 ABC transporter D8X09_19840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_19845 PF00005 ABC transporter D8X09_19845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D8X09_19850 PF12911 N-terminal TM domain of oligopeptide transport permease C D8X09_19850 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19855 PF00528 Binding-protein-dependent transport system inner membrane component D8X09_19860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D8X09_19865 PF10396 GTP-binding protein TrmE N-terminus D8X09_19865 PF12631 MnmE helical domain D8X09_19865 PF01926 50S ribosome-binding GTPase D8X09_19875 PF00486 Transcriptional regulatory protein, C terminal D8X09_19875 PF00072 Response regulator receiver domain D8X09_19880 PF00672 HAMP domain D8X09_19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D8X09_19880 PF00512 His Kinase A (phospho-acceptor) domain D8X09_19895 PF01970 Tripartite tricarboxylate transporter TctA family D8X09_19900 PF00155 Aminotransferase class I and II D8X09_19905 PF00313 'Cold-shock' DNA-binding domain