locus-tag class description BA6348_00010 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BA6348_00015 PF01402 Ribbon-helix-helix protein, copG family BA6348_00045 PF01648 4'-phosphopantetheinyl transferase superfamily BA6348_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_00100 PF00672 HAMP domain BA6348_00100 PF02743 Cache domain BA6348_00105 PF00005 ABC transporter BA6348_00110 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_00115 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_00120 PF12849 PBP superfamily domain BA6348_00130 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_00150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_00155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_00170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_00175 PF03180 NLPA lipoprotein BA6348_00180 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_00185 PF09383 NIL domain BA6348_00185 PF00005 ABC transporter BA6348_00195 PF03816 Cell envelope-related transcriptional attenuator domain BA6348_00205 PF00248 Aldo/keto reductase family BA6348_00210 PF06491 Disulphide isomerase BA6348_00215 PF17770 Ribonuclease J C-terminal domain BA6348_00215 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA6348_00215 PF00753 Metallo-beta-lactamase superfamily BA6348_00230 PF02630 SCO1/SenC BA6348_00235 PF01206 Sulfurtransferase TusA BA6348_00235 PF00581 Rhodanese-like domain BA6348_00240 PF01053 Cys/Met metabolism PLP-dependent enzyme BA6348_00245 PF01022 Bacterial regulatory protein, arsR family BA6348_00250 PF05977 Transmembrane secretion effector BA6348_00255 PF07726 ATPase family associated with various cellular activities (AAA) BA6348_00255 PF17863 AAA lid domain BA6348_00280 PF00005 ABC transporter BA6348_00300 PF00392 Bacterial regulatory proteins, gntR family BA6348_00300 PF00155 Aminotransferase class I and II BA6348_00310 PF00440 Bacterial regulatory proteins, tetR family BA6348_00315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA6348_00325 PF00285 Citrate synthase, C-terminal domain BA6348_00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_00330 PF03466 LysR substrate binding domain BA6348_00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_00350 PF12793 Sugar transport-related sRNA regulator N-term BA6348_00360 PF00672 HAMP domain BA6348_00360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_00360 PF05227 CHASE3 domain BA6348_00365 PF00574 Clp protease BA6348_00380 PF12706 Beta-lactamase superfamily domain BA6348_00385 PF01037 Lrp/AsnC ligand binding domain BA6348_00405 PF00999 Sodium/hydrogen exchanger family BA6348_00410 PF02595 Glycerate kinase family BA6348_00415 PF00471 Ribosomal protein L33 BA6348_00420 PF07683 Cobalamin synthesis protein cobW C-terminal domain BA6348_00420 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA6348_00430 PF13005 zinc-finger binding domain of transposase IS66 BA6348_00430 PF13817 IS66 C-terminal element BA6348_00430 PF03050 Transposase IS66 family BA6348_00430 PF13007 Transposase C of IS166 homeodomain BA6348_00435 PF05717 IS66 Orf2 like protein BA6348_00470 PF00486 Transcriptional regulatory protein, C terminal BA6348_00470 PF00072 Response regulator receiver domain BA6348_00475 PF16736 Single Cache-like BA6348_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_00475 PF00989 PAS fold BA6348_00475 PF00512 His Kinase A (phospho-acceptor) domain BA6348_00480 PF00881 Nitroreductase family BA6348_00490 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA6348_00495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BA6348_00495 PF09125 Cytochrome C oxidase subunit II, transmembrane BA6348_00510 PF00072 Response regulator receiver domain BA6348_00510 PF00196 Bacterial regulatory proteins, luxR family BA6348_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_00515 PF07730 Histidine kinase BA6348_00525 PF07690 Major Facilitator Superfamily BA6348_00530 PF07833 Copper amine oxidase N-terminal domain BA6348_00545 PF09560 Sporulation protein YunB (Spo_YunB) BA6348_00550 PF00689 Cation transporting ATPase, C-terminus BA6348_00550 PF00690 Cation transporter/ATPase, N-terminus BA6348_00555 PF00381 PTS HPr component phosphorylation site BA6348_00560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA6348_00560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA6348_00565 PF00294 pfkB family carbohydrate kinase BA6348_00570 PF08220 DeoR-like helix-turn-helix domain BA6348_00570 PF00455 DeoR C terminal sensor domain BA6348_00580 PF02659 Putative manganese efflux pump BA6348_00600 PF02702 Osmosensitive K+ channel His kinase sensor domain BA6348_00605 PF02669 K+-transporting ATPase, c chain BA6348_00615 PF03814 Potassium-transporting ATPase A subunit BA6348_00630 PF10057 Uncharacterized conserved protein (DUF2294) BA6348_00635 PF08402 TOBE domain BA6348_00635 PF00005 ABC transporter BA6348_00640 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_00645 PF01547 Bacterial extracellular solute-binding protein BA6348_00650 PF01975 Survival protein SurE BA6348_00665 PF00403 Heavy-metal-associated domain BA6348_00670 PF00403 Heavy-metal-associated domain BA6348_00675 PF04227 Indigoidine synthase A like protein BA6348_00680 PF00294 pfkB family carbohydrate kinase BA6348_00685 PF01047 MarR family BA6348_00690 PF02525 Flavodoxin-like fold BA6348_00695 PF07681 DoxX BA6348_00700 PF17954 Quercetinase C-terminal cupin domain BA6348_00700 PF02678 Pirin BA6348_00710 PF07690 Major Facilitator Superfamily BA6348_00715 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BA6348_00715 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BA6348_00725 PF00989 PAS fold BA6348_00725 PF02954 Bacterial regulatory protein, Fis family BA6348_00725 PF00158 Sigma-54 interaction domain BA6348_00730 PF03606 C4-dicarboxylate anaerobic carrier BA6348_00735 PF01546 Peptidase family M20/M25/M40 BA6348_00735 PF07687 Peptidase dimerisation domain BA6348_00740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA6348_00740 PF13378 Enolase C-terminal domain-like BA6348_00750 PF01521 Iron-sulphur cluster biosynthesis BA6348_00755 PF00989 PAS fold BA6348_00755 PF16736 Single Cache-like BA6348_00755 PF00512 His Kinase A (phospho-acceptor) domain BA6348_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_00760 PF00072 Response regulator receiver domain BA6348_00760 PF00486 Transcriptional regulatory protein, C terminal BA6348_00790 PF00158 Sigma-54 interaction domain BA6348_00790 PF00989 PAS fold BA6348_00790 PF02954 Bacterial regulatory protein, Fis family BA6348_00805 PF00881 Nitroreductase family BA6348_00810 PF01032 FecCD transport family BA6348_00815 PF01032 FecCD transport family BA6348_00820 PF01497 Periplasmic binding protein BA6348_00825 PF12833 Helix-turn-helix domain BA6348_00825 PF01497 Periplasmic binding protein BA6348_00830 PF01476 LysM domain BA6348_00835 PF01476 LysM domain BA6348_00845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_00845 PF00005 ABC transporter BA6348_00880 PF01022 Bacterial regulatory protein, arsR family BA6348_00885 PF00403 Heavy-metal-associated domain BA6348_00900 PF00672 HAMP domain BA6348_00900 PF00512 His Kinase A (phospho-acceptor) domain BA6348_00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_00905 PF00072 Response regulator receiver domain BA6348_00905 PF00486 Transcriptional regulatory protein, C terminal BA6348_00910 PF01738 Dienelactone hydrolase family BA6348_00915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_00920 PF00881 Nitroreductase family BA6348_00945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_00950 PF01212 Beta-eliminating lyase BA6348_00955 PF12833 Helix-turn-helix domain BA6348_00955 PF02805 Metal binding domain of Ada BA6348_00960 PF00730 HhH-GPD superfamily base excision DNA repair protein BA6348_00960 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BA6348_00965 PF01261 Xylose isomerase-like TIM barrel BA6348_00980 PF01047 MarR family BA6348_00990 PF00196 Bacterial regulatory proteins, luxR family BA6348_00990 PF00072 Response regulator receiver domain BA6348_00995 PF01609 Transposase DDE domain BA6348_01005 PF00356 Bacterial regulatory proteins, lacI family BA6348_01010 PF00107 Zinc-binding dehydrogenase BA6348_01010 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_01015 PF07690 Major Facilitator Superfamily BA6348_01020 PF00005 ABC transporter BA6348_01025 PF00005 ABC transporter BA6348_01030 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_01030 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_01035 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_01040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_01045 PF10100 Staphylopine dehydrogenase BA6348_01075 PF00583 Acetyltransferase (GNAT) family BA6348_01080 PF00512 His Kinase A (phospho-acceptor) domain BA6348_01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_01085 PF00512 His Kinase A (phospho-acceptor) domain BA6348_01085 PF00672 HAMP domain BA6348_01085 PF13426 PAS domain BA6348_01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_01085 PF14827 Double sensory domain of two-component sensor kinase BA6348_01095 PF07690 Major Facilitator Superfamily BA6348_01100 PF00005 ABC transporter BA6348_01100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_01105 PF00005 ABC transporter BA6348_01105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_01110 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_01110 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_01115 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_01120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_01130 PF03466 LysR substrate binding domain BA6348_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_01180 PF13276 HTH-like domain BA6348_01180 PF13333 Integrase core domain BA6348_01180 PF00665 Integrase core domain BA6348_01195 PF01609 Transposase DDE domain BA6348_01200 PF01380 SIS domain BA6348_01205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA6348_01205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA6348_01205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA6348_01205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA6348_01215 PF02457 DisA bacterial checkpoint controller nucleotide-binding BA6348_01220 PF13490 Putative zinc-finger BA6348_01225 PF08281 Sigma-70, region 4 BA6348_01225 PF04542 Sigma-70 region 2 BA6348_01235 PF00491 Arginase family BA6348_01320 PF01609 Transposase DDE domain BA6348_01330 PF01522 Polysaccharide deacetylase BA6348_01335 PF14089 KinB-signalling pathway activation in sporulation BA6348_01345 PF10609 NUBPL iron-transfer P-loop NTPase BA6348_01350 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_01355 PF00380 Ribosomal protein S9/S16 BA6348_01360 PF00572 Ribosomal protein L13 BA6348_01365 PF01416 tRNA pseudouridine synthase BA6348_01370 PF02361 Cobalt transport protein BA6348_01375 PF00005 ABC transporter BA6348_01380 PF00005 ABC transporter BA6348_01385 PF01196 Ribosomal protein L17 BA6348_01390 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BA6348_01390 PF01000 RNA polymerase Rpb3/RpoA insert domain BA6348_01390 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BA6348_01395 PF00411 Ribosomal protein S11 BA6348_01400 PF00416 Ribosomal protein S13/S18 BA6348_01405 PF00444 Ribosomal protein L36 BA6348_01410 PF01176 Translation initiation factor 1A / IF-1 BA6348_01415 PF00557 Metallopeptidase family M24 BA6348_01420 PF05191 Adenylate kinase, active site lid BA6348_01425 PF00344 SecY translocase BA6348_01430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BA6348_01435 PF00327 Ribosomal protein L30p/L7e BA6348_01440 PF03719 Ribosomal protein S5, C-terminal domain BA6348_01440 PF00333 Ribosomal protein S5, N-terminal domain BA6348_01445 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BA6348_01450 PF00347 Ribosomal protein L6 BA6348_01455 PF00410 Ribosomal protein S8 BA6348_01460 PF00253 Ribosomal protein S14p/S29e BA6348_01465 PF00673 ribosomal L5P family C-terminus BA6348_01465 PF00281 Ribosomal protein L5 BA6348_01470 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BA6348_01470 PF00467 KOW motif BA6348_01475 PF00238 Ribosomal protein L14p/L23e BA6348_01480 PF00366 Ribosomal protein S17 BA6348_01485 PF00831 Ribosomal L29 protein BA6348_01490 PF00252 Ribosomal protein L16p/L10e BA6348_01495 PF07650 KH domain BA6348_01495 PF00189 Ribosomal protein S3, C-terminal domain BA6348_01500 PF00237 Ribosomal protein L22p/L17e BA6348_01505 PF00203 Ribosomal protein S19 BA6348_01510 PF03947 Ribosomal Proteins L2, C-terminal domain BA6348_01510 PF00181 Ribosomal Proteins L2, RNA binding domain BA6348_01515 PF00276 Ribosomal protein L23 BA6348_01520 PF00573 Ribosomal protein L4/L1 family BA6348_01525 PF00297 Ribosomal protein L3 BA6348_01530 PF00338 Ribosomal protein S10p/S20e BA6348_01540 PF01152 Bacterial-like globin BA6348_01545 PF00892 EamA-like transporter family BA6348_01550 PF03143 Elongation factor Tu C-terminal domain BA6348_01550 PF03144 Elongation factor Tu domain 2 BA6348_01550 PF00009 Elongation factor Tu GTP binding domain BA6348_01555 PF00009 Elongation factor Tu GTP binding domain BA6348_01555 PF03144 Elongation factor Tu domain 2 BA6348_01555 PF03764 Elongation factor G, domain IV BA6348_01555 PF14492 Elongation Factor G, domain II BA6348_01555 PF00679 Elongation factor G C-terminus BA6348_01560 PF00177 Ribosomal protein S7p/S5e BA6348_01565 PF00164 Ribosomal protein S12/S23 BA6348_01570 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BA6348_01575 PF04998 RNA polymerase Rpb1, domain 5 BA6348_01575 PF05000 RNA polymerase Rpb1, domain 4 BA6348_01575 PF04983 RNA polymerase Rpb1, domain 3 BA6348_01575 PF00623 RNA polymerase Rpb1, domain 2 BA6348_01575 PF04997 RNA polymerase Rpb1, domain 1 BA6348_01580 PF04563 RNA polymerase beta subunit BA6348_01580 PF04561 RNA polymerase Rpb2, domain 2 BA6348_01580 PF04565 RNA polymerase Rpb2, domain 3 BA6348_01580 PF10385 RNA polymerase beta subunit external 1 domain BA6348_01580 PF00562 RNA polymerase Rpb2, domain 6 BA6348_01580 PF04560 RNA polymerase Rpb2, domain 7 BA6348_01585 PF05175 Methyltransferase small domain BA6348_01590 PF16320 Ribosomal protein L7/L12 dimerisation domain BA6348_01590 PF00542 Ribosomal protein L7/L12 C-terminal domain BA6348_01595 PF00466 Ribosomal protein L10 BA6348_01600 PF00687 Ribosomal protein L1p/L10e family BA6348_01605 PF03946 Ribosomal protein L11, N-terminal domain BA6348_01605 PF00298 Ribosomal protein L11, RNA binding domain BA6348_01610 PF02357 Transcription termination factor nusG BA6348_01610 PF00467 KOW motif BA6348_01615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BA6348_01620 PF00471 Ribosomal protein L33 BA6348_01625 PF04542 Sigma-70 region 2 BA6348_01625 PF08281 Sigma-70, region 4 BA6348_01630 PF05991 YacP-like NYN domain BA6348_01635 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA6348_01635 PF00588 SpoU rRNA Methylase family BA6348_01640 PF00636 Ribonuclease III domain BA6348_01645 PF09190 DALR domain BA6348_01645 PF01406 tRNA synthetases class I (C) catalytic domain BA6348_01650 PF00132 Bacterial transferase hexapeptide (six repeats) BA6348_01650 PF06426 Serine acetyltransferase, N-terminal BA6348_01655 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA6348_01675 PF01066 CDP-alcohol phosphatidyltransferase BA6348_01685 PF18073 Rubredoxin metal binding domain BA6348_01690 PF17871 AAA lid domain BA6348_01690 PF07724 AAA domain (Cdc48 subfamily) BA6348_01690 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_01690 PF02861 Clp amino terminal domain, pathogenicity island component BA6348_01690 PF10431 C-terminal, D2-small domain, of ClpB protein BA6348_01695 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BA6348_01700 PF02151 UvrB/uvrC motif BA6348_01705 PF17727 CtsR C-terminal dimerization domain BA6348_01705 PF05848 CtsR N-terminal HTH domain BA6348_01710 PF13419 Haloacid dehalogenase-like hydrolase BA6348_01715 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BA6348_01715 PF04101 Glycosyltransferase family 28 C-terminal domain BA6348_01745 PF00152 tRNA synthetases class II (D, K and N) BA6348_01745 PF01336 OB-fold nucleic acid binding domain BA6348_01755 PF01207 Dihydrouridine synthase (Dus) BA6348_01760 PF08671 Anti-repressor SinI BA6348_01760 PF01381 Helix-turn-helix BA6348_01765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA6348_01770 PF02152 Dihydroneopterin aldolase BA6348_01775 PF00809 Pterin binding enzyme BA6348_01780 PF01063 Amino-transferase class IV BA6348_01785 PF00902 Sec-independent protein translocase protein (TatC) BA6348_01790 PF02416 mttA/Hcf106 family BA6348_01805 PF00005 ABC transporter BA6348_01830 PF01527 Transposase BA6348_01835 PF13333 Integrase core domain BA6348_01835 PF00665 Integrase core domain BA6348_01835 PF13276 HTH-like domain BA6348_01850 PF01609 Transposase DDE domain BA6348_01860 PF00117 Glutamine amidotransferase class-I BA6348_01865 PF00425 chorismate binding enzyme BA6348_01865 PF04715 Anthranilate synthase component I, N terminal region BA6348_01880 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_01885 PF13145 PPIC-type PPIASE domain BA6348_01890 PF01430 Hsp33 protein BA6348_01895 PF04545 Sigma-70, region 4 BA6348_01895 PF03979 Sigma-70 factor, region 1.1 BA6348_01895 PF04542 Sigma-70 region 2 BA6348_01895 PF04539 Sigma-70 region 3 BA6348_01895 PF00140 Sigma-70 factor, region 1.2 BA6348_01900 PF00005 ABC transporter BA6348_01900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_01905 PF00877 NlpC/P60 family BA6348_01905 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BA6348_01910 PF13378 Enolase C-terminal domain-like BA6348_01910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA6348_01915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_01920 PF00005 ABC transporter BA6348_01920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_01925 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_01925 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_01930 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_01965 PF01610 Transposase BA6348_01965 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_01965 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_02070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA6348_02150 PF03309 Type III pantothenate kinase BA6348_02155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BA6348_02155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BA6348_02160 PF02910 Fumarate reductase flavoprotein C-term BA6348_02160 PF00890 FAD binding domain BA6348_02165 PF01475 Ferric uptake regulator family BA6348_02170 PF00950 ABC 3 transport family BA6348_02175 PF00005 ABC transporter BA6348_02180 PF01297 Zinc-uptake complex component A periplasmic BA6348_02190 PF02445 Quinolinate synthetase A protein BA6348_02200 PF01497 Periplasmic binding protein BA6348_02215 PF01434 Peptidase family M41 BA6348_02215 PF06480 FtsH Extracellular BA6348_02215 PF17862 AAA+ lid domain BA6348_02215 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_02225 PF01171 PP-loop family BA6348_02225 PF09179 TilS substrate binding domain BA6348_02225 PF11734 TilS substrate C-terminal domain BA6348_02230 PF12821 Threonine/Serine exporter, ThrE BA6348_02230 PF06738 Putative threonine/serine exporter BA6348_02240 PF00069 Protein kinase domain BA6348_02245 PF00092 von Willebrand factor type A domain BA6348_02250 PF07228 Stage II sporulation protein E (SpoIIE) BA6348_02255 PF00575 S1 RNA binding domain BA6348_02270 PF07873 YabP family BA6348_02280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_02280 PF12793 Sugar transport-related sRNA regulator N-term BA6348_02285 PF07690 Major Facilitator Superfamily BA6348_02295 PF01479 S4 domain BA6348_02300 PF03819 MazG nucleotide pyrophosphohydrolase domain BA6348_02300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_02305 PF14667 Polysaccharide biosynthesis C-terminal domain BA6348_02305 PF01943 Polysaccharide biosynthesis protein BA6348_02310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BA6348_02310 PF15714 Stage V sporulation protein T C-terminal, transcription factor BA6348_02315 PF05698 Bacterial trigger factor protein (TF) C-terminus BA6348_02320 PF03461 TRCF domain BA6348_02320 PF02559 CarD-like/TRCF domain BA6348_02320 PF00270 DEAD/DEAH box helicase BA6348_02320 PF00271 Helicase conserved C-terminal domain BA6348_02320 PF17757 UvrB interaction domain BA6348_02330 PF01195 Peptidyl-tRNA hydrolase BA6348_02335 PF14693 Ribosomal protein TL5, C-terminal domain BA6348_02335 PF01386 Ribosomal L25p family BA6348_02340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BA6348_02340 PF14572 Phosphoribosyl synthetase-associated domain BA6348_02345 PF00132 Bacterial transferase hexapeptide (six repeats) BA6348_02345 PF12804 MobA-like NTP transferase domain BA6348_02350 PF02492 CobW/HypB/UreG, nucleotide-binding domain BA6348_02350 PF07683 Cobalamin synthesis protein cobW C-terminal domain BA6348_02355 PF04026 SpoVG BA6348_02360 PF01042 Endoribonuclease L-PSP BA6348_02365 PF09182 Bacterial purine repressor, N-terminal BA6348_02365 PF00156 Phosphoribosyl transferase domain BA6348_02370 PF00288 GHMP kinases N terminal domain BA6348_02370 PF08544 GHMP kinases C terminal BA6348_02375 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA6348_02380 PF06257 Biofilm formation stimulator VEG BA6348_02385 PF00398 Ribosomal RNA adenine dimethylase BA6348_02390 PF13662 Toprim domain BA6348_02390 PF13331 Domain of unknown function (DUF4093) BA6348_02395 PF01476 LysM domain BA6348_02395 PF06725 3D domain BA6348_02400 PF01026 TatD related DNase BA6348_02405 PF09334 tRNA synthetases class I (M) BA6348_02405 PF01588 Putative tRNA binding domain BA6348_02405 PF08264 Anticodon-binding domain of tRNA BA6348_02410 PF18277 AbrB C-terminal domain BA6348_02410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BA6348_02415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_02420 PF01541 GIY-YIG catalytic domain BA6348_02425 PF05175 Methyltransferase small domain BA6348_02430 PF06156 Initiation control protein YabA BA6348_02435 PF04468 PSP1 C-terminal conserved region BA6348_02440 PF09115 DNA polymerase III, delta subunit, C terminal BA6348_02445 PF03885 Protein of unknown function (DUF327) BA6348_02450 PF06153 Cyclic-di-AMP receptor BA6348_02455 PF02223 Thymidylate kinase BA6348_02460 PF01276 Orn/Lys/Arg decarboxylase, major domain BA6348_02460 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BA6348_02470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA6348_02470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA6348_02470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA6348_02480 PF07441 SigmaK-factor processing regulatory protein BofA BA6348_02500 PF13662 Toprim domain BA6348_02500 PF02132 RecR protein BA6348_02505 PF02575 YbaB/EbfC DNA-binding family BA6348_02510 PF12169 DNA polymerase III subunits gamma and tau domain III BA6348_02515 PF00989 PAS fold BA6348_02515 PF00512 His Kinase A (phospho-acceptor) domain BA6348_02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_02525 PF01966 HD domain BA6348_02535 PF09335 SNARE associated Golgi protein BA6348_02550 PF13460 NAD(P)H-binding BA6348_02555 PF00581 Rhodanese-like domain BA6348_02555 PF00899 ThiF family BA6348_02560 PF02583 Metal-sensitive transcriptional repressor BA6348_02565 PF13686 DsrE/DsrF/DrsH-like family BA6348_02570 PF01925 Sulfite exporter TauE/SafE BA6348_02575 PF01206 Sulfurtransferase TusA BA6348_02580 PF00753 Metallo-beta-lactamase superfamily BA6348_02580 PF00581 Rhodanese-like domain BA6348_02585 PF01206 Sulfurtransferase TusA BA6348_02585 PF00581 Rhodanese-like domain BA6348_02605 PF01479 S4 domain BA6348_02605 PF00849 RNA pseudouridylate synthase BA6348_02610 PF14437 MafB19-like deaminase BA6348_02620 PF03123 CAT RNA binding domain BA6348_02620 PF00874 PRD domain BA6348_02625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA6348_02630 PF00381 PTS HPr component phosphorylation site BA6348_02635 PF02896 PEP-utilising enzyme, TIM barrel domain BA6348_02635 PF00391 PEP-utilising enzyme, mobile domain BA6348_02635 PF05524 PEP-utilising enzyme, N-terminal BA6348_02640 PF02378 Phosphotransferase system, EIIC BA6348_02640 PF00367 phosphotransferase system, EIIB BA6348_02640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA6348_02655 PF01381 Helix-turn-helix BA6348_02660 PF01638 HxlR-like helix-turn-helix BA6348_02665 PF07681 DoxX BA6348_02690 PF02811 PHP domain BA6348_02695 PF08220 DeoR-like helix-turn-helix domain BA6348_02695 PF00455 DeoR C terminal sensor domain BA6348_02700 PF08402 TOBE domain BA6348_02700 PF00005 ABC transporter BA6348_02710 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_02725 PF00463 Isocitrate lyase family BA6348_02730 PF01274 Malate synthase BA6348_02735 PF02403 Seryl-tRNA synthetase N-terminal domain BA6348_02735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA6348_02740 PF01174 SNO glutamine amidotransferase family BA6348_02745 PF01680 SOR/SNZ family BA6348_02750 PF00768 D-alanyl-D-alanine carboxypeptidase BA6348_02750 PF07943 Penicillin-binding protein 5, C-terminal domain BA6348_02760 PF00478 IMP dehydrogenase / GMP reductase domain BA6348_02760 PF00571 CBS domain BA6348_02765 PF14175 YaaC-like Protein BA6348_02785 PF00072 Response regulator receiver domain BA6348_02790 PF03989 DNA gyrase C-terminal domain, beta-propeller BA6348_02790 PF00521 DNA gyrase/topoisomerase IV, subunit A BA6348_02795 PF07690 Major Facilitator Superfamily BA6348_02945 PF00204 DNA gyrase B BA6348_02945 PF00986 DNA gyrase B subunit, carboxyl terminus BA6348_02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_02945 PF01751 Toprim domain BA6348_02950 PF04025 Domain of unknown function (DUF370) BA6348_02955 PF02463 RecF/RecN/SMC N terminal domain BA6348_02965 PF02767 DNA polymerase III beta subunit, central domain BA6348_02965 PF02768 DNA polymerase III beta subunit, C-terminal domain BA6348_02965 PF00712 DNA polymerase III beta subunit, N-terminal domain BA6348_02970 PF08299 Bacterial dnaA protein helix-turn-helix BA6348_02970 PF00308 Bacterial dnaA protein BA6348_02970 PF11638 DnaA N-terminal domain BA6348_02980 PF00468 Ribosomal protein L34 BA6348_02990 PF00825 Ribonuclease P BA6348_02995 PF01809 Putative membrane protein insertion efficiency factor BA6348_03000 PF02096 60Kd inner membrane protein BA6348_03005 PF14804 Jag N-terminus BA6348_03005 PF01424 R3H domain BA6348_03010 PF01926 50S ribosome-binding GTPase BA6348_03010 PF12631 MnmE helical domain BA6348_03010 PF10396 GTP-binding protein TrmE N-terminus BA6348_03015 PF01134 Glucose inhibited division protein A BA6348_03015 PF13932 GidA associated domain BA6348_03020 PF02527 rRNA small subunit methyltransferase G BA6348_03025 PF02308 MgtC family BA6348_03030 PF02195 ParB-like nuclease domain BA6348_03030 PF17762 HTH domain found in ParB protein BA6348_03035 PF13614 AAA domain BA6348_03040 PF02195 ParB-like nuclease domain BA6348_03040 PF17762 HTH domain found in ParB protein BA6348_03045 PF00266 Aminotransferase class-V BA6348_03050 PF04474 Protein of unknown function (DUF554) BA6348_03055 PF00781 Diacylglycerol kinase catalytic domain BA6348_03060 PF06866 Protein of unknown function (DUF1256) BA6348_03070 PF00924 Mechanosensitive ion channel BA6348_03075 PF06107 Bacterial protein of unknown function (DUF951) BA6348_03090 PF08439 Oligopeptidase F BA6348_03090 PF01432 Peptidase family M3 BA6348_03100 PF13460 NAD(P)H-binding BA6348_03105 PF06071 Protein of unknown function (DUF933) BA6348_03105 PF01926 50S ribosome-binding GTPase BA6348_03110 PF01250 Ribosomal protein S6 BA6348_03115 PF00436 Single-strand binding protein family BA6348_03120 PF01084 Ribosomal protein S18 BA6348_03130 PF02272 DHHA1 domain BA6348_03130 PF01368 DHH family BA6348_03135 PF01281 Ribosomal protein L9, N-terminal domain BA6348_03135 PF03948 Ribosomal protein L9, C-terminal domain BA6348_03140 PF03796 DnaB-like helicase C terminal domain BA6348_03140 PF00772 DnaB-like helicase N terminal domain BA6348_03145 PF00709 Adenylosuccinate synthetase BA6348_03160 PF01551 Peptidase family M23 BA6348_03160 PF04225 Opacity-associated protein A LysM-like domain BA6348_03165 PF00072 Response regulator receiver domain BA6348_03165 PF00486 Transcriptional regulatory protein, C terminal BA6348_03170 PF13426 PAS domain BA6348_03170 PF00512 His Kinase A (phospho-acceptor) domain BA6348_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_03170 PF00672 HAMP domain BA6348_03180 PF09648 YycH protein BA6348_03185 PF00753 Metallo-beta-lactamase superfamily BA6348_03195 PF13180 PDZ domain BA6348_03205 PF02590 Predicted SPOUT methyltransferase BA6348_03225 PF00239 Resolvase, N terminal domain BA6348_03225 PF02796 Helix-turn-helix domain of resolvase BA6348_03265 PF01381 Helix-turn-helix BA6348_03315 PF18273 Type III R-M EcoP15I C-terminal domain BA6348_03315 PF01555 DNA methylase BA6348_03365 PF13936 Helix-turn-helix domain BA6348_03365 PF00665 Integrase core domain BA6348_03375 PF02796 Helix-turn-helix domain of resolvase BA6348_03375 PF00239 Resolvase, N terminal domain BA6348_03380 PF01609 Transposase DDE domain BA6348_03405 PF12704 MacB-like periplasmic core domain BA6348_03405 PF02687 FtsX-like permease family BA6348_03405 PF00005 ABC transporter BA6348_03410 PF06039 Malate:quinone oxidoreductase (Mqo) BA6348_03425 PF12833 Helix-turn-helix domain BA6348_03425 PF02311 AraC-like ligand binding domain BA6348_03435 PF00756 Putative esterase BA6348_03445 PF00486 Transcriptional regulatory protein, C terminal BA6348_03445 PF00072 Response regulator receiver domain BA6348_03450 PF00512 His Kinase A (phospho-acceptor) domain BA6348_03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_03455 PF00324 Amino acid permease BA6348_03480 PF02954 Bacterial regulatory protein, Fis family BA6348_03480 PF01590 GAF domain BA6348_03480 PF00158 Sigma-54 interaction domain BA6348_03485 PF03099 Biotin/lipoate A/B protein ligase family BA6348_03490 PF00676 Dehydrogenase E1 component BA6348_03495 PF02780 Transketolase, C-terminal domain BA6348_03495 PF02779 Transketolase, pyrimidine binding domain BA6348_03500 PF02817 e3 binding domain BA6348_03500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA6348_03500 PF00364 Biotin-requiring enzyme BA6348_03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_03505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA6348_03510 PF00672 HAMP domain BA6348_03510 PF00512 His Kinase A (phospho-acceptor) domain BA6348_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_03515 PF00486 Transcriptional regulatory protein, C terminal BA6348_03515 PF00072 Response regulator receiver domain BA6348_03520 PF00005 ABC transporter BA6348_03525 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03530 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_03535 PF01235 Sodium:alanine symporter family BA6348_03540 PF07722 Peptidase C26 BA6348_03545 PF03831 PhnA domain BA6348_03545 PF08274 PhnA Zinc-Ribbon BA6348_03560 PF01061 ABC-2 type transporter BA6348_03570 PF00285 Citrate synthase, C-terminal domain BA6348_03575 PF03972 MmgE/PrpD family BA6348_03595 PF00378 Enoyl-CoA hydratase/isomerase BA6348_03615 PF00797 N-acetyltransferase BA6348_03620 PF00158 Sigma-54 interaction domain BA6348_03620 PF00072 Response regulator receiver domain BA6348_03620 PF02954 Bacterial regulatory protein, Fis family BA6348_03625 PF00202 Aminotransferase class-III BA6348_03630 PF00171 Aldehyde dehydrogenase family BA6348_03645 PF00892 EamA-like transporter family BA6348_03650 PF01040 UbiA prenyltransferase family BA6348_03655 PF03239 Iron permease FTR1 family BA6348_03660 PF10518 TAT (twin-arginine translocation) pathway signal sequence BA6348_03660 PF04261 Dyp-type peroxidase family BA6348_03665 PF09375 Imelysin BA6348_03670 PF07729 FCD domain BA6348_03670 PF00392 Bacterial regulatory proteins, gntR family BA6348_03675 PF02589 LUD domain BA6348_03680 PF11870 Domain of unknown function (DUF3390) BA6348_03680 PF13183 4Fe-4S dicluster domain BA6348_03680 PF02589 LUD domain BA6348_03685 PF02754 Cysteine-rich domain BA6348_03690 PF01610 Transposase BA6348_03690 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_03690 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_03700 PF13344 Haloacid dehalogenase-like hydrolase BA6348_03705 PF03459 TOBE domain BA6348_03705 PF17912 MalK OB fold domain BA6348_03705 PF00005 ABC transporter BA6348_03710 PF13416 Bacterial extracellular solute-binding protein BA6348_03715 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03720 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03735 PF03466 LysR substrate binding domain BA6348_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_03745 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03750 PF00005 ABC transporter BA6348_03750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_03755 PF00005 ABC transporter BA6348_03755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_03770 PF00005 ABC transporter BA6348_03795 PF07690 Major Facilitator Superfamily BA6348_03800 PF02898 Nitric oxide synthase, oxygenase domain BA6348_03805 PF01497 Periplasmic binding protein BA6348_03810 PF02638 Glycosyl hydrolase-like 10 BA6348_03825 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_03825 PF01610 Transposase BA6348_03825 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_03830 PF01810 LysE type translocator BA6348_03885 PF01584 CheW-like domain BA6348_03885 PF02895 Signal transducing histidine kinase, homodimeric domain BA6348_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_03885 PF01627 Hpt domain BA6348_03885 PF07194 P2 response regulator binding domain BA6348_03890 PF00072 Response regulator receiver domain BA6348_03905 PF01032 FecCD transport family BA6348_03910 PF01032 FecCD transport family BA6348_03915 PF00005 ABC transporter BA6348_03920 PF01497 Periplasmic binding protein BA6348_03925 PF00005 ABC transporter BA6348_03940 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03945 PF09383 NIL domain BA6348_03945 PF00005 ABC transporter BA6348_03950 PF03180 NLPA lipoprotein BA6348_03960 PF13416 Bacterial extracellular solute-binding protein BA6348_03965 PF01156 Inosine-uridine preferring nucleoside hydrolase BA6348_03970 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03975 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_03980 PF08402 TOBE domain BA6348_03980 PF00005 ABC transporter BA6348_03985 PF01979 Amidohydrolase family BA6348_03985 PF13382 Adenine deaminase C-terminal domain BA6348_03990 PF03972 MmgE/PrpD family BA6348_03995 PF00005 ABC transporter BA6348_04000 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_04005 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_04020 PF01554 MatE BA6348_04025 PF02308 MgtC family BA6348_04030 PF10415 Fumarase C C-terminus BA6348_04030 PF00206 Lyase BA6348_04060 PF01609 Transposase DDE domain BA6348_04065 PF00271 Helicase conserved C-terminal domain BA6348_04065 PF09382 RQC domain BA6348_04065 PF00570 HRDC domain BA6348_04065 PF00270 DEAD/DEAH box helicase BA6348_04065 PF16124 RecQ zinc-binding BA6348_04070 PF07690 Major Facilitator Superfamily BA6348_04075 PF00501 AMP-binding enzyme BA6348_04075 PF01553 Acyltransferase BA6348_04080 PF00196 Bacterial regulatory proteins, luxR family BA6348_04080 PF00072 Response regulator receiver domain BA6348_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_04085 PF00512 His Kinase A (phospho-acceptor) domain BA6348_04090 PF03610 PTS system fructose IIA component BA6348_04090 PF00874 PRD domain BA6348_04090 PF00158 Sigma-54 interaction domain BA6348_04095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA6348_04100 PF02378 Phosphotransferase system, EIIC BA6348_04105 PF04794 YdjC-like protein BA6348_04110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BA6348_04115 PF11975 Family 4 glycosyl hydrolase C-terminal domain BA6348_04115 PF02056 Family 4 glycosyl hydrolase BA6348_04125 PF00381 PTS HPr component phosphorylation site BA6348_04130 PF00512 His Kinase A (phospho-acceptor) domain BA6348_04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_04135 PF00486 Transcriptional regulatory protein, C terminal BA6348_04135 PF00072 Response regulator receiver domain BA6348_04140 PF08241 Methyltransferase domain BA6348_04145 PF00270 DEAD/DEAH box helicase BA6348_04145 PF00271 Helicase conserved C-terminal domain BA6348_04155 PF00171 Aldehyde dehydrogenase family BA6348_04175 PF00158 Sigma-54 interaction domain BA6348_04175 PF01590 GAF domain BA6348_04175 PF02954 Bacterial regulatory protein, Fis family BA6348_04180 PF00158 Sigma-54 interaction domain BA6348_04180 PF00989 PAS fold BA6348_04180 PF02954 Bacterial regulatory protein, Fis family BA6348_04185 PF00180 Isocitrate/isopropylmalate dehydrogenase BA6348_04190 PF00171 Aldehyde dehydrogenase family BA6348_04200 PF03480 Bacterial extracellular solute-binding protein, family 7 BA6348_04205 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BA6348_04210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA6348_04215 PF02913 FAD linked oxidases, C-terminal domain BA6348_04215 PF01565 FAD binding domain BA6348_04225 PF02743 Cache domain BA6348_04225 PF00672 HAMP domain BA6348_04225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_04230 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_04235 PF00270 DEAD/DEAH box helicase BA6348_04235 PF00271 Helicase conserved C-terminal domain BA6348_04255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA6348_04255 PF02378 Phosphotransferase system, EIIC BA6348_04260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA6348_04260 PF08279 HTH domain BA6348_04260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA6348_04260 PF00874 PRD domain BA6348_04260 PF05043 Mga helix-turn-helix domain BA6348_04265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA6348_04270 PF08125 Mannitol dehydrogenase C-terminal domain BA6348_04270 PF01232 Mannitol dehydrogenase Rossmann domain BA6348_04275 PF05524 PEP-utilising enzyme, N-terminal BA6348_04275 PF00391 PEP-utilising enzyme, mobile domain BA6348_04275 PF02896 PEP-utilising enzyme, TIM barrel domain BA6348_04280 PF00381 PTS HPr component phosphorylation site BA6348_04285 PF16347 Domain of unknown function (DUF4976) BA6348_04285 PF00884 Sulfatase BA6348_04290 PF03601 Conserved hypothetical protein 698 BA6348_04295 PF03466 LysR substrate binding domain BA6348_04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_04305 PF00936 BMC domain BA6348_04315 PF00465 Iron-containing alcohol dehydrogenase BA6348_04315 PF00171 Aldehyde dehydrogenase family BA6348_04320 PF00936 BMC domain BA6348_04325 PF06130 Phosphate propanoyltransferase BA6348_04335 PF03319 Ethanolamine utilisation protein EutN/carboxysome BA6348_04340 PF00936 BMC domain BA6348_04350 PF07568 Histidine kinase BA6348_04350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_04350 PF12282 Signal transduction histidine kinase BA6348_04355 PF03861 ANTAR domain BA6348_04355 PF00072 Response regulator receiver domain BA6348_04360 PF06277 Ethanolamine utilisation protein EutA BA6348_04365 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BA6348_04370 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BA6348_04375 PF00056 lactate/malate dehydrogenase, NAD binding domain BA6348_04375 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA6348_04390 PF13396 Phospholipase_D-nuclease N-terminal BA6348_04390 PF13091 PLD-like domain BA6348_04400 PF02566 OsmC-like protein BA6348_04405 PF01546 Peptidase family M20/M25/M40 BA6348_04410 PF01614 Bacterial transcriptional regulator BA6348_04410 PF09339 IclR helix-turn-helix domain BA6348_04420 PF00324 Amino acid permease BA6348_04440 PF01047 MarR family BA6348_04450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_04450 PF00672 HAMP domain BA6348_04450 PF02743 Cache domain BA6348_04475 PF00174 Oxidoreductase molybdopterin binding domain BA6348_04480 PF01048 Phosphorylase superfamily BA6348_04490 PF01740 STAS domain BA6348_04490 PF00916 Sulfate permease family BA6348_04500 PF13419 Haloacid dehalogenase-like hydrolase BA6348_04510 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_04515 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_04520 PF13416 Bacterial extracellular solute-binding protein BA6348_04525 PF03009 Glycerophosphoryl diester phosphodiesterase family BA6348_04530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_04530 PF00672 HAMP domain BA6348_04530 PF02743 Cache domain BA6348_04545 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA6348_04545 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BA6348_04550 PF00324 Amino acid permease BA6348_04570 PF00732 GMC oxidoreductase BA6348_04570 PF05199 GMC oxidoreductase BA6348_04575 PF01053 Cys/Met metabolism PLP-dependent enzyme BA6348_04580 PF00158 Sigma-54 interaction domain BA6348_04580 PF00072 Response regulator receiver domain BA6348_04580 PF02954 Bacterial regulatory protein, Fis family BA6348_04585 PF03992 Antibiotic biosynthesis monooxygenase BA6348_04595 PF03167 Uracil DNA glycosylase superfamily BA6348_04605 PF00111 2Fe-2S iron-sulfur cluster binding domain BA6348_04605 PF00970 Oxidoreductase FAD-binding domain BA6348_04605 PF00175 Oxidoreductase NAD-binding domain BA6348_04615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BA6348_04615 PF06827 Zinc finger found in FPG and IleRS BA6348_04615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BA6348_04620 PF02926 THUMP domain BA6348_04620 PF01170 Putative RNA methylase family UPF0020 BA6348_04630 PF07690 Major Facilitator Superfamily BA6348_04645 PF01479 S4 domain BA6348_04645 PF00849 RNA pseudouridylate synthase BA6348_04650 PF13171 Protein of unknown function (DUF4004) BA6348_04660 PF16859 Tetracyclin repressor-like, C-terminal domain BA6348_04660 PF00440 Bacterial regulatory proteins, tetR family BA6348_04670 PF00873 AcrB/AcrD/AcrF family BA6348_04680 PF01966 HD domain BA6348_04690 PF00085 Thioredoxin BA6348_04715 PF08741 YwhD family BA6348_04725 PF00912 Transglycosylase BA6348_04725 PF00905 Penicillin binding protein transpeptidase domain BA6348_04730 PF17284 Spermidine synthase tetramerisation domain BA6348_04735 PF00491 Arginase family BA6348_04755 PF00158 Sigma-54 interaction domain BA6348_04755 PF02954 Bacterial regulatory protein, Fis family BA6348_04755 PF13426 PAS domain BA6348_04760 PF12544 Lysine-2,3-aminomutase BA6348_04765 PF13183 4Fe-4S dicluster domain BA6348_04765 PF02754 Cysteine-rich domain BA6348_04770 PF02803 Thiolase, C-terminal domain BA6348_04770 PF00108 Thiolase, N-terminal domain BA6348_04775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA6348_04775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA6348_04780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA6348_04780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA6348_04780 PF02770 Acyl-CoA dehydrogenase, middle domain BA6348_04785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA6348_04785 PF02770 Acyl-CoA dehydrogenase, middle domain BA6348_04785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA6348_04790 PF08359 YsiA-like protein, C-terminal region BA6348_04790 PF00440 Bacterial regulatory proteins, tetR family BA6348_04795 PF01642 Methylmalonyl-CoA mutase BA6348_04795 PF02310 B12 binding domain BA6348_04800 PF00578 AhpC/TSA family BA6348_04805 PF13192 Thioredoxin domain BA6348_04805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_04810 PF05066 HB1, ASXL, restriction endonuclease HTH domain BA6348_04815 PF06418 CTP synthase N-terminus BA6348_04815 PF00117 Glutamine amidotransferase class-I BA6348_04820 PF10997 Alternate to MurJ BA6348_04825 PF01610 Transposase BA6348_04825 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_04825 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_04830 PF00072 Response regulator receiver domain BA6348_04835 PF01116 Fructose-bisphosphate aldolase class-II BA6348_04840 PF00923 Transaldolase/Fructose-6-phosphate aldolase BA6348_04845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA6348_04850 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BA6348_04855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA6348_04855 PF07498 Rho termination factor, N-terminal domain BA6348_04855 PF07497 Rho termination factor, RNA-binding domain BA6348_04860 PF08525 Opacity-associated protein A N-terminal motif BA6348_04860 PF01476 LysM domain BA6348_04860 PF01551 Peptidase family M23 BA6348_04870 PF01197 Ribosomal protein L31 BA6348_04880 PF00265 Thymidine kinase BA6348_04890 PF03462 PCRF domain BA6348_04890 PF00472 RF-1 domain BA6348_04895 PF17827 PrmC N-terminal domain BA6348_04895 PF13847 Methyltransferase domain BA6348_04900 PF09551 Stage II sporulation protein R (spore_II_R) BA6348_04910 PF03481 Putative GTP-binding controlling metal-binding BA6348_04910 PF01300 Telomere recombination BA6348_04915 PF02659 Putative manganese efflux pump BA6348_04920 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA6348_04925 PF02502 Ribose/Galactose Isomerase BA6348_04930 PF04260 Protein of unknown function (DUF436) BA6348_04935 PF00464 Serine hydroxymethyltransferase BA6348_04950 PF02350 UDP-N-acetylglucosamine 2-epimerase BA6348_04960 PF00202 Aminotransferase class-III BA6348_04970 PF06968 Biotin and Thiamin Synthesis associated domain BA6348_04970 PF04055 Radical SAM superfamily BA6348_04975 PF00155 Aminotransferase class I and II BA6348_04980 PF00561 alpha/beta hydrolase fold BA6348_04990 PF02803 Thiolase, C-terminal domain BA6348_04990 PF00108 Thiolase, N-terminal domain BA6348_05005 PF00119 ATP synthase A chain BA6348_05010 PF00137 ATP synthase subunit C BA6348_05020 PF00213 ATP synthase delta (OSCP) subunit BA6348_05025 PF00306 ATP synthase alpha/beta chain, C terminal domain BA6348_05025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA6348_05025 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA6348_05030 PF00231 ATP synthase BA6348_05035 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA6348_05035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA6348_05040 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BA6348_05040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BA6348_05050 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BA6348_05055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BA6348_05060 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BA6348_05065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BA6348_05070 PF00146 NADH dehydrogenase BA6348_05075 PF12838 4Fe-4S dicluster domain BA6348_05080 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BA6348_05085 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BA6348_05090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BA6348_05090 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BA6348_05090 PF00361 Proton-conducting membrane transporter BA6348_05095 PF00361 Proton-conducting membrane transporter BA6348_05100 PF00361 Proton-conducting membrane transporter BA6348_05115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA6348_05120 PF08486 Stage II sporulation protein BA6348_05125 PF01551 Peptidase family M23 BA6348_05130 PF12116 Stage III sporulation protein D BA6348_05140 PF00460 Flagella basal body rod protein BA6348_05140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA6348_05145 PF00460 Flagella basal body rod protein BA6348_05145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA6348_05155 PF01066 CDP-alcohol phosphatidyltransferase BA6348_05160 PF07977 FabA-like domain BA6348_05165 PF03808 Glycosyl transferase WecB/TagA/CpsF family BA6348_05170 PF00953 Glycosyl transferase family 4 BA6348_05180 PF01205 Uncharacterized protein family UPF0029 BA6348_05180 PF09186 Domain of unknown function (DUF1949) BA6348_05190 PF00395 S-layer homology domain BA6348_05210 PF02899 Phage integrase, N-terminal SAM-like domain BA6348_05210 PF00589 Phage integrase family BA6348_05215 PF01381 Helix-turn-helix BA6348_05235 PF12826 Helix-hairpin-helix motif BA6348_05235 PF04002 RadC-like JAB domain BA6348_05280 PF13419 Haloacid dehalogenase-like hydrolase BA6348_05295 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_05315 PF00082 Subtilase family BA6348_05320 PF02772 S-adenosylmethionine synthetase, central domain BA6348_05320 PF00438 S-adenosylmethionine synthetase, N-terminal domain BA6348_05320 PF02773 S-adenosylmethionine synthetase, C-terminal domain BA6348_05325 PF01522 Polysaccharide deacetylase BA6348_05325 PF14883 Hypothetical glycosyl hydrolase family 13 BA6348_05330 PF05384 Sensor protein DegS BA6348_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_05330 PF07730 Histidine kinase BA6348_05335 PF00072 Response regulator receiver domain BA6348_05335 PF00196 Bacterial regulatory proteins, luxR family BA6348_05345 PF00271 Helicase conserved C-terminal domain BA6348_05345 PF04851 Type III restriction enzyme, res subunit BA6348_05370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA6348_05370 PF00460 Flagella basal body rod protein BA6348_05375 PF00669 Bacterial flagellin N-terminal helical region BA6348_05375 PF00700 Bacterial flagellin C-terminal helical region BA6348_05385 PF02623 FliW protein BA6348_05390 PF02599 Global regulator protein family BA6348_05410 PF00669 Bacterial flagellin N-terminal helical region BA6348_05410 PF00700 Bacterial flagellin C-terminal helical region BA6348_05415 PF03646 FlaG protein BA6348_05420 PF02465 Flagellar hook-associated protein 2 N-terminus BA6348_05420 PF07196 Flagellin hook IN motif BA6348_05420 PF07195 Flagellar hook-associated protein 2 C-terminus BA6348_05425 PF02561 Flagellar protein FliS BA6348_05445 PF01618 MotA/TolQ/ExbB proton channel family BA6348_05455 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_05460 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_05465 PF00313 'Cold-shock' DNA-binding domain BA6348_05470 PF11871 Domain of unknown function (DUF3391) BA6348_05470 PF01966 HD domain BA6348_05475 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BA6348_05475 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BA6348_05480 PF07516 SecA Wing and Scaffold domain BA6348_05480 PF07517 SecA DEAD-like domain BA6348_05480 PF01043 SecA preprotein cross-linking domain BA6348_05505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA6348_05510 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA6348_05510 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA6348_05515 PF00696 Amino acid kinase family BA6348_05520 PF00202 Aminotransferase class-III BA6348_05525 PF00117 Glutamine amidotransferase class-I BA6348_05525 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BA6348_05530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA6348_05530 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA6348_05530 PF02142 MGS-like domain BA6348_05535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA6348_05535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA6348_05545 PF01966 HD domain BA6348_05555 PF00764 Arginosuccinate synthase BA6348_05560 PF14698 Argininosuccinate lyase C-terminal BA6348_05560 PF00206 Lyase BA6348_05565 PF03845 Spore germination protein BA6348_05595 PF00465 Iron-containing alcohol dehydrogenase BA6348_05600 PF00005 ABC transporter BA6348_05605 PF02687 FtsX-like permease family BA6348_05605 PF18075 FtsX extracellular domain BA6348_05610 PF01551 Peptidase family M23 BA6348_05610 PF01476 LysM domain BA6348_05610 PF08525 Opacity-associated protein A N-terminal motif BA6348_05615 PF01471 Putative peptidoglycan binding domain BA6348_05615 PF03572 Peptidase family S41 BA6348_05615 PF17820 PDZ domain BA6348_05620 PF17820 PDZ domain BA6348_05635 PF00271 Helicase conserved C-terminal domain BA6348_05635 PF04851 Type III restriction enzyme, res subunit BA6348_05635 PF17757 UvrB interaction domain BA6348_05635 PF12344 Ultra-violet resistance protein B BA6348_05635 PF02151 UvrB/uvrC motif BA6348_05640 PF17760 UvrA interaction domain BA6348_05640 PF17755 UvrA DNA-binding domain BA6348_05645 PF01966 HD domain BA6348_05650 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BA6348_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_05665 PF02603 HPr Serine kinase N terminus BA6348_05665 PF07475 HPr Serine kinase C-terminal domain BA6348_05670 PF14602 Hexapeptide repeat of succinyl-transferase BA6348_05675 PF13393 Histidyl-tRNA synthetase BA6348_05680 PF01634 ATP phosphoribosyltransferase BA6348_05685 PF00815 Histidinol dehydrogenase BA6348_05690 PF00475 Imidazoleglycerol-phosphate dehydratase BA6348_05695 PF00117 Glutamine amidotransferase class-I BA6348_05700 PF00977 Histidine biosynthesis protein BA6348_05705 PF00977 Histidine biosynthesis protein BA6348_05710 PF01502 Phosphoribosyl-AMP cyclohydrolase BA6348_05710 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BA6348_05715 PF13302 Acetyltransferase (GNAT) domain BA6348_05770 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_05775 PF03668 P-loop ATPase protein family BA6348_05780 PF01933 Uncharacterised protein family UPF0052 BA6348_05785 PF14527 WhiA LAGLIDADG-like domain BA6348_05785 PF10298 WhiA N-terminal LAGLIDADG-like domain BA6348_05785 PF02650 WhiA C-terminal HTH domain BA6348_05790 PF00381 PTS HPr component phosphorylation site BA6348_05800 PF08141 Small acid-soluble spore protein H family BA6348_05805 PF00574 Clp protease BA6348_05820 PF13458 Periplasmic binding protein BA6348_05830 PF00989 PAS fold BA6348_05830 PF08447 PAS fold BA6348_05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_05830 PF00512 His Kinase A (phospho-acceptor) domain BA6348_05840 PF04963 Sigma-54 factor, core binding domain BA6348_05840 PF04552 Sigma-54, DNA binding domain BA6348_05840 PF00309 Sigma-54 factor, Activator interacting domain (AID) BA6348_05850 PF04198 Putative sugar-binding domain BA6348_05860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA6348_05860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA6348_05865 PF00162 Phosphoglycerate kinase BA6348_05870 PF00121 Triosephosphate isomerase BA6348_05875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BA6348_05875 PF01676 Metalloenzyme superfamily BA6348_05880 PF00113 Enolase, C-terminal TIM barrel domain BA6348_05880 PF03952 Enolase, N-terminal domain BA6348_05890 PF00005 ABC transporter BA6348_05895 PF01032 FecCD transport family BA6348_05900 PF01032 FecCD transport family BA6348_05905 PF01497 Periplasmic binding protein BA6348_05915 PF08281 Sigma-70, region 4 BA6348_05915 PF04542 Sigma-70 region 2 BA6348_05920 PF03649 Uncharacterised protein family (UPF0014) BA6348_05925 PF00005 ABC transporter BA6348_05930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA6348_05935 PF03840 Preprotein translocase SecG subunit BA6348_05940 PF00575 S1 RNA binding domain BA6348_05940 PF17876 Cold shock domain BA6348_05940 PF00773 RNB domain BA6348_05940 PF08206 Ribonuclease B OB domain BA6348_05945 PF01668 SmpB protein BA6348_05960 PF01609 Transposase DDE domain BA6348_05975 PF00145 C-5 cytosine-specific DNA methylase BA6348_05995 PF09339 IclR helix-turn-helix domain BA6348_05995 PF01614 Bacterial transcriptional regulator BA6348_06010 PF00989 PAS fold BA6348_06010 PF13426 PAS domain BA6348_06010 PF13188 PAS domain BA6348_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_06010 PF00512 His Kinase A (phospho-acceptor) domain BA6348_06020 PF00005 ABC transporter BA6348_06025 PF02653 Branched-chain amino acid transport system / permease component BA6348_06040 PF00557 Metallopeptidase family M24 BA6348_06045 PF03352 Methyladenine glycosylase BA6348_06045 PF00117 Glutamine amidotransferase class-I BA6348_06045 PF00958 GMP synthase C terminal domain BA6348_06045 PF13673 Acetyltransferase (GNAT) domain BA6348_06045 PF13302 Acetyltransferase (GNAT) domain BA6348_06065 PF13936 Helix-turn-helix domain BA6348_06065 PF00665 Integrase core domain BA6348_06085 PF08447 PAS fold BA6348_06085 PF00989 PAS fold BA6348_06085 PF00512 His Kinase A (phospho-acceptor) domain BA6348_06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_06115 PF00072 Response regulator receiver domain BA6348_06115 PF00990 Diguanylate cyclase, GGDEF domain BA6348_06125 PF09962 Uncharacterized conserved protein (DUF2196) BA6348_06140 PF12802 MarR family BA6348_06145 PF00005 ABC transporter BA6348_06145 PF00571 CBS domain BA6348_06150 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_06155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BA6348_06160 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_06160 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_06160 PF01610 Transposase BA6348_06190 PF00005 ABC transporter BA6348_06205 PF09335 SNARE associated Golgi protein BA6348_06220 PF07690 Major Facilitator Superfamily BA6348_06235 PF00465 Iron-containing alcohol dehydrogenase BA6348_06250 PF13426 PAS domain BA6348_06250 PF02954 Bacterial regulatory protein, Fis family BA6348_06250 PF00158 Sigma-54 interaction domain BA6348_06270 PF00190 Cupin BA6348_06280 PF00440 Bacterial regulatory proteins, tetR family BA6348_06280 PF13977 BetI-type transcriptional repressor, C-terminal BA6348_06300 PF00245 Alkaline phosphatase BA6348_06305 PF00271 Helicase conserved C-terminal domain BA6348_06305 PF09369 Domain of unknown function (DUF1998) BA6348_06305 PF00270 DEAD/DEAH box helicase BA6348_06310 PF13482 RNase_H superfamily BA6348_06325 PF13302 Acetyltransferase (GNAT) domain BA6348_06330 PF00155 Aminotransferase class I and II BA6348_06330 PF00392 Bacterial regulatory proteins, gntR family BA6348_06340 PF00893 Small Multidrug Resistance protein BA6348_06345 PF17314 Family of unknown function (DUF5360) BA6348_06350 PF00230 Major intrinsic protein BA6348_06360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA6348_06360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA6348_06365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BA6348_06365 PF01266 FAD dependent oxidoreductase BA6348_06370 PF04309 Glycerol-3-phosphate responsive antiterminator BA6348_06385 PF00005 ABC transporter BA6348_06405 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_06420 PF00106 short chain dehydrogenase BA6348_06430 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA6348_06435 PF00510 Cytochrome c oxidase subunit III BA6348_06440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BA6348_06450 PF03061 Thioesterase superfamily BA6348_06455 PF03061 Thioesterase superfamily BA6348_06460 PF00378 Enoyl-CoA hydratase/isomerase BA6348_06465 PF00501 AMP-binding enzyme BA6348_06465 PF14535 AMP-binding enzyme C-terminal domain BA6348_06470 PF00378 Enoyl-CoA hydratase/isomerase BA6348_06475 PF00378 Enoyl-CoA hydratase/isomerase BA6348_06480 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BA6348_06480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA6348_06480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA6348_06485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA6348_06485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA6348_06490 PF02803 Thiolase, C-terminal domain BA6348_06490 PF00108 Thiolase, N-terminal domain BA6348_06495 PF00108 Thiolase, N-terminal domain BA6348_06495 PF02803 Thiolase, C-terminal domain BA6348_06510 PF02653 Branched-chain amino acid transport system / permease component BA6348_06515 PF02653 Branched-chain amino acid transport system / permease component BA6348_06520 PF00005 ABC transporter BA6348_06520 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA6348_06525 PF00005 ABC transporter BA6348_06535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_06540 PF05138 Phenylacetic acid catabolic protein BA6348_06555 PF01883 Iron-sulfur cluster assembly protein BA6348_06560 PF00171 Aldehyde dehydrogenase family BA6348_06565 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BA6348_06580 PF02628 Cytochrome oxidase assembly protein BA6348_06590 PF00149 Calcineurin-like phosphoesterase BA6348_06590 PF12320 Type 5 capsule protein repressor C-terminal domain BA6348_06595 PF13476 AAA domain BA6348_06600 PF13361 UvrD-like helicase C-terminal domain BA6348_06600 PF12705 PD-(D/E)XK nuclease superfamily BA6348_06605 PF13361 UvrD-like helicase C-terminal domain BA6348_06605 PF00580 UvrD/REP helicase N-terminal domain BA6348_06605 PF12705 PD-(D/E)XK nuclease superfamily BA6348_06610 PF05163 DinB family BA6348_06625 PF00696 Amino acid kinase family BA6348_06630 PF01131 DNA topoisomerase BA6348_06630 PF01751 Toprim domain BA6348_06635 PF06866 Protein of unknown function (DUF1256) BA6348_06640 PF04303 PrpF protein BA6348_06645 PF13533 Biotin-lipoyl like BA6348_06650 PF00005 ABC transporter BA6348_06660 PF00440 Bacterial regulatory proteins, tetR family BA6348_06665 PF00551 Formyl transferase BA6348_06665 PF01842 ACT domain BA6348_06675 PF01609 Transposase DDE domain BA6348_06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_06680 PF03466 LysR substrate binding domain BA6348_06695 PF01144 Coenzyme A transferase BA6348_06700 PF01144 Coenzyme A transferase BA6348_06705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA6348_06720 PF00871 Acetokinase family BA6348_06725 PF00575 S1 RNA binding domain BA6348_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_06745 PF03466 LysR substrate binding domain BA6348_06750 PF00326 Prolyl oligopeptidase family BA6348_06755 PF08447 PAS fold BA6348_06755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_06755 PF00512 His Kinase A (phospho-acceptor) domain BA6348_06755 PF00989 PAS fold BA6348_06770 PF00072 Response regulator receiver domain BA6348_06775 PF02423 Ornithine cyclodeaminase/mu-crystallin family BA6348_06780 PF07690 Major Facilitator Superfamily BA6348_06780 PF00083 Sugar (and other) transporter BA6348_06800 PF13556 PucR C-terminal helix-turn-helix domain BA6348_06800 PF17853 GGDEF-like domain BA6348_06800 PF06018 CodY GAF-like domain BA6348_06805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA6348_06805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA6348_06810 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_06815 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_06820 PF03845 Spore germination protein BA6348_06825 PF01180 Dihydroorotate dehydrogenase BA6348_06830 PF01891 Cobalt uptake substrate-specific transmembrane region BA6348_06835 PF02553 Cobalt transport protein component CbiN BA6348_06840 PF02361 Cobalt transport protein BA6348_06845 PF00005 ABC transporter BA6348_06855 PF00120 Glutamine synthetase, catalytic domain BA6348_06855 PF03951 Glutamine synthetase, beta-Grasp domain BA6348_06860 PF02558 Ketopantoate reductase PanE/ApbA BA6348_06860 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA6348_06865 PF02401 LytB protein BA6348_06870 PF12832 MFS_1 like family BA6348_06880 PF00296 Luciferase-like monooxygenase BA6348_06890 PF03551 Transcriptional regulator PadR-like family BA6348_06910 PF01384 Phosphate transporter family BA6348_06915 PF01865 Protein of unknown function DUF47 BA6348_06920 PF01810 LysE type translocator BA6348_06925 PF00155 Aminotransferase class I and II BA6348_06925 PF00392 Bacterial regulatory proteins, gntR family BA6348_06940 PF07875 Coat F domain BA6348_06955 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA6348_06955 PF03807 NADP oxidoreductase coenzyme F420-dependent BA6348_06960 PF00171 Aldehyde dehydrogenase family BA6348_06965 PF00696 Amino acid kinase family BA6348_06965 PF01472 PUA domain BA6348_06980 PF00005 ABC transporter BA6348_06995 PF00378 Enoyl-CoA hydratase/isomerase BA6348_06995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA6348_06995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA6348_07000 PF00108 Thiolase, N-terminal domain BA6348_07000 PF02803 Thiolase, C-terminal domain BA6348_07005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA6348_07005 PF02770 Acyl-CoA dehydrogenase, middle domain BA6348_07005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA6348_07015 PF03845 Spore germination protein BA6348_07025 PF03845 Spore germination protein BA6348_07035 PF03079 ARD/ARD' family BA6348_07040 PF00596 Class II Aldolase and Adducin N-terminal domain BA6348_07050 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BA6348_07050 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BA6348_07055 PF08281 Sigma-70, region 4 BA6348_07055 PF04542 Sigma-70 region 2 BA6348_07060 PF13791 Sigma factor regulator C-terminal BA6348_07060 PF13800 Sigma factor regulator N-terminal BA6348_07065 PF01636 Phosphotransferase enzyme family BA6348_07075 PF13302 Acetyltransferase (GNAT) domain BA6348_07080 PF00664 ABC transporter transmembrane region BA6348_07080 PF00005 ABC transporter BA6348_07085 PF00664 ABC transporter transmembrane region BA6348_07085 PF00005 ABC transporter BA6348_07090 PF07690 Major Facilitator Superfamily BA6348_07095 PF00188 Cysteine-rich secretory protein family BA6348_07095 PF14504 CAP-associated N-terminal BA6348_07105 PF01343 Peptidase family S49 BA6348_07110 PF00005 ABC transporter BA6348_07115 PF01522 Polysaccharide deacetylase BA6348_07115 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BA6348_07130 PF03960 ArsC family BA6348_07135 PF00155 Aminotransferase class I and II BA6348_07145 PF01597 Glycine cleavage H-protein BA6348_07150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_07150 PF00672 HAMP domain BA6348_07150 PF02743 Cache domain BA6348_07170 PF01546 Peptidase family M20/M25/M40 BA6348_07170 PF07687 Peptidase dimerisation domain BA6348_07175 PF01293 Phosphoenolpyruvate carboxykinase BA6348_07180 PF00005 ABC transporter BA6348_07185 PF01458 Uncharacterized protein family (UPF0051) BA6348_07190 PF00266 Aminotransferase class-V BA6348_07195 PF01592 NifU-like N terminal domain BA6348_07200 PF01458 Uncharacterized protein family (UPF0051) BA6348_07230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_07240 PF13344 Haloacid dehalogenase-like hydrolase BA6348_07240 PF00293 NUDIX domain BA6348_07250 PF00392 Bacterial regulatory proteins, gntR family BA6348_07250 PF00155 Aminotransferase class I and II BA6348_07265 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_07270 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_07275 PF01566 Natural resistance-associated macrophage protein BA6348_07285 PF01145 SPFH domain / Band 7 family BA6348_07285 PF15975 Flotillin BA6348_07290 PF13739 Deacetylase PdaC BA6348_07290 PF11738 Protein of unknown function (DUF3298) BA6348_07290 PF01522 Polysaccharide deacetylase BA6348_07295 PF00696 Amino acid kinase family BA6348_07295 PF13840 ACT domain BA6348_07305 PF01904 Protein of unknown function DUF72 BA6348_07310 PF01925 Sulfite exporter TauE/SafE BA6348_07315 PF02872 5'-nucleotidase, C-terminal domain BA6348_07325 PF08827 Domain of unknown function (DUF1805) BA6348_07330 PF01966 HD domain BA6348_07330 PF11871 Domain of unknown function (DUF3391) BA6348_07335 PF01544 CorA-like Mg2+ transporter protein BA6348_07345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_07360 PF09560 Sporulation protein YunB (Spo_YunB) BA6348_07375 PF01872 RibD C-terminal domain BA6348_07375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA6348_07380 PF00677 Lumazine binding domain BA6348_07385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BA6348_07385 PF00925 GTP cyclohydrolase II BA6348_07390 PF00885 6,7-dimethyl-8-ribityllumazine synthase BA6348_07415 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_07420 PF03845 Spore germination protein BA6348_07430 PF00171 Aldehyde dehydrogenase family BA6348_07435 PF17932 Tetracyclin repressor-like, C-terminal domain BA6348_07435 PF00440 Bacterial regulatory proteins, tetR family BA6348_07440 PF01551 Peptidase family M23 BA6348_07445 PF01969 Protein of unknown function DUF111 BA6348_07450 PF01965 DJ-1/PfpI family BA6348_07455 PF01969 Protein of unknown function DUF111 BA6348_07460 PF00149 Calcineurin-like phosphoesterase BA6348_07470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BA6348_07470 PF04055 Radical SAM superfamily BA6348_07475 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BA6348_07480 PF06265 Protein of unknown function (DUF1027) BA6348_07495 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BA6348_07505 PF01934 Protein of unknown function DUF86 BA6348_07525 PF13344 Haloacid dehalogenase-like hydrolase BA6348_07530 PF04608 Phosphatidylglycerophosphatase A BA6348_07540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA6348_07540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA6348_07550 PF01106 NifU-like domain BA6348_07555 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_07560 PF01053 Cys/Met metabolism PLP-dependent enzyme BA6348_07565 PF07315 Protein of unknown function (DUF1462) BA6348_07600 PF17862 AAA+ lid domain BA6348_07600 PF06480 FtsH Extracellular BA6348_07600 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_07600 PF01434 Peptidase family M41 BA6348_07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_07615 PF07293 Protein of unknown function (DUF1450) BA6348_07620 PF04055 Radical SAM superfamily BA6348_07630 PF01521 Iron-sulphur cluster biosynthesis BA6348_07695 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_07700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_07710 PF09297 NADH pyrophosphatase zinc ribbon domain BA6348_07710 PF00293 NUDIX domain BA6348_07720 PF06725 3D domain BA6348_07725 PF01497 Periplasmic binding protein BA6348_07730 PF02681 Divergent PAP2 family BA6348_07740 PF02789 Cytosol aminopeptidase family, N-terminal domain BA6348_07740 PF00883 Cytosol aminopeptidase family, catalytic domain BA6348_07745 PF13380 CoA binding domain BA6348_07750 PF00174 Oxidoreductase molybdopterin binding domain BA6348_07760 PF01609 Transposase DDE domain BA6348_07785 PF07690 Major Facilitator Superfamily BA6348_07795 PF01569 PAP2 superfamily BA6348_07800 PF01547 Bacterial extracellular solute-binding protein BA6348_07805 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_07810 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_07815 PF13508 Acetyltransferase (GNAT) domain BA6348_07815 PF00583 Acetyltransferase (GNAT) family BA6348_07820 PF01915 Glycosyl hydrolase family 3 C-terminal domain BA6348_07820 PF00933 Glycosyl hydrolase family 3 N terminal domain BA6348_07825 PF13580 SIS domain BA6348_07830 PF01609 Transposase DDE domain BA6348_07835 PF01545 Cation efflux family BA6348_07835 PF16916 Dimerisation domain of Zinc Transporter BA6348_07850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_07865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_07865 PF00005 ABC transporter BA6348_07870 PF00005 ABC transporter BA6348_07870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_07880 PF01546 Peptidase family M20/M25/M40 BA6348_07880 PF07687 Peptidase dimerisation domain BA6348_07885 PF01614 Bacterial transcriptional regulator BA6348_07885 PF09339 IclR helix-turn-helix domain BA6348_07900 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_07915 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BA6348_07915 PF12833 Helix-turn-helix domain BA6348_07920 PF01497 Periplasmic binding protein BA6348_07950 PF00561 alpha/beta hydrolase fold BA6348_07960 PF00672 HAMP domain BA6348_07960 PF00989 PAS fold BA6348_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_07960 PF00512 His Kinase A (phospho-acceptor) domain BA6348_07965 PF00072 Response regulator receiver domain BA6348_07965 PF00486 Transcriptional regulatory protein, C terminal BA6348_07975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA6348_07975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA6348_07985 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BA6348_08005 PF00892 EamA-like transporter family BA6348_08015 PF01810 LysE type translocator BA6348_08035 PF03099 Biotin/lipoate A/B protein ligase family BA6348_08035 PF10437 Bacterial lipoate protein ligase C-terminus BA6348_08040 PF04439 Streptomycin adenylyltransferase BA6348_08055 PF04542 Sigma-70 region 2 BA6348_08055 PF08281 Sigma-70, region 4 BA6348_08065 PF00892 EamA-like transporter family BA6348_08080 PF07690 Major Facilitator Superfamily BA6348_08085 PF07690 Major Facilitator Superfamily BA6348_08100 PF03594 Benzoate membrane transport protein BA6348_08105 PF00072 Response regulator receiver domain BA6348_08105 PF02954 Bacterial regulatory protein, Fis family BA6348_08105 PF00158 Sigma-54 interaction domain BA6348_08110 PF13188 PAS domain BA6348_08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_08110 PF08448 PAS fold BA6348_08110 PF00072 Response regulator receiver domain BA6348_08110 PF00512 His Kinase A (phospho-acceptor) domain BA6348_08115 PF00465 Iron-containing alcohol dehydrogenase BA6348_08120 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_08120 PF00107 Zinc-binding dehydrogenase BA6348_08140 PF01970 Tripartite tricarboxylate transporter TctA family BA6348_08160 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BA6348_08160 PF00355 Rieske [2Fe-2S] domain BA6348_08165 PF00171 Aldehyde dehydrogenase family BA6348_08170 PF00005 ABC transporter BA6348_08170 PF00571 CBS domain BA6348_08175 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_08180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BA6348_08185 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_08190 PF13472 GDSL-like Lipase/Acylhydrolase family BA6348_08195 PF00180 Isocitrate/isopropylmalate dehydrogenase BA6348_08200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_08205 PF00106 short chain dehydrogenase BA6348_08210 PF00072 Response regulator receiver domain BA6348_08210 PF00196 Bacterial regulatory proteins, luxR family BA6348_08215 PF09587 Bacterial capsule synthesis protein PGA_cap BA6348_08225 PF00155 Aminotransferase class I and II BA6348_08225 PF00392 Bacterial regulatory proteins, gntR family BA6348_08230 PF01609 Transposase DDE domain BA6348_08240 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_08245 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_08250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_08250 PF00005 ABC transporter BA6348_08255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_08255 PF00005 ABC transporter BA6348_08260 PF10055 Uncharacterized small protein (DUF2292) BA6348_08270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_08280 PF00144 Beta-lactamase BA6348_08280 PF11954 Domain of unknown function (DUF3471) BA6348_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_08285 PF00512 His Kinase A (phospho-acceptor) domain BA6348_08285 PF00989 PAS fold BA6348_08285 PF13426 PAS domain BA6348_08285 PF13188 PAS domain BA6348_08290 PF07662 Na+ dependent nucleoside transporter C-terminus BA6348_08290 PF01773 Na+ dependent nucleoside transporter N-terminus BA6348_08305 PF13309 HTH domain BA6348_08305 PF08348 YheO-like PAS domain BA6348_08335 PF00324 Amino acid permease BA6348_08340 PF07969 Amidohydrolase family BA6348_08345 PF07883 Cupin domain BA6348_08370 PF00324 Amino acid permease BA6348_08375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA6348_08375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA6348_08380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA6348_08380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA6348_08385 PF00491 Arginase family BA6348_08395 PF00202 Aminotransferase class-III BA6348_08400 PF02954 Bacterial regulatory protein, Fis family BA6348_08400 PF00989 PAS fold BA6348_08400 PF00158 Sigma-54 interaction domain BA6348_08410 PF01048 Phosphorylase superfamily BA6348_08415 PF07690 Major Facilitator Superfamily BA6348_08435 PF00953 Glycosyl transferase family 4 BA6348_08450 PF00440 Bacterial regulatory proteins, tetR family BA6348_08450 PF17922 Tetracyclin repressor-like, C-terminal domain BA6348_08475 PF01965 DJ-1/PfpI family BA6348_08475 PF12833 Helix-turn-helix domain BA6348_08480 PF00989 PAS fold BA6348_08480 PF16736 Single Cache-like BA6348_08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_08480 PF00512 His Kinase A (phospho-acceptor) domain BA6348_08490 PF02073 Thermophilic metalloprotease (M29) BA6348_08505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA6348_08505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA6348_08510 PF01594 AI-2E family transporter BA6348_08515 PF00072 Response regulator receiver domain BA6348_08515 PF00486 Transcriptional regulatory protein, C terminal BA6348_08520 PF00672 HAMP domain BA6348_08520 PF00989 PAS fold BA6348_08520 PF18698 Histidine kinase sensor domain BA6348_08520 PF00512 His Kinase A (phospho-acceptor) domain BA6348_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_08535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_08545 PF08239 Bacterial SH3 domain BA6348_08545 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_08550 PF00805 Pentapeptide repeats (8 copies) BA6348_08555 PF07827 KNTase C-terminal domain BA6348_08575 PF14489 QueF-like protein BA6348_08580 PF04055 Radical SAM superfamily BA6348_08585 PF01242 6-pyruvoyl tetrahydropterin synthase BA6348_08590 PF06508 Queuosine biosynthesis protein QueC BA6348_08600 PF03932 CutC family BA6348_08615 PF01475 Ferric uptake regulator family BA6348_08620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_08620 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA6348_08650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_08650 PF04324 BFD-like [2Fe-2S] binding domain BA6348_08665 PF00557 Metallopeptidase family M24 BA6348_08665 PF01321 Creatinase/Prolidase N-terminal domain BA6348_08670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_08675 PF00158 Sigma-54 interaction domain BA6348_08675 PF02954 Bacterial regulatory protein, Fis family BA6348_08675 PF00989 PAS fold BA6348_08680 PF01266 FAD dependent oxidoreductase BA6348_08685 PF05544 Proline racemase BA6348_08690 PF00701 Dihydrodipicolinate synthetase family BA6348_08695 PF00171 Aldehyde dehydrogenase family BA6348_08700 PF05544 Proline racemase BA6348_08705 PF07457 Protein of unknown function (DUF1516) BA6348_08725 PF01380 SIS domain BA6348_08725 PF01418 Helix-turn-helix domain, rpiR family BA6348_08730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BA6348_08750 PF11728 Putative aromatic acid exporter C-terminal domain BA6348_08750 PF06081 Aromatic acid exporter family member 1 BA6348_08755 PF00005 ABC transporter BA6348_08765 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_08770 PF09339 IclR helix-turn-helix domain BA6348_08770 PF01614 Bacterial transcriptional regulator BA6348_08775 PF02423 Ornithine cyclodeaminase/mu-crystallin family BA6348_08780 PF00155 Aminotransferase class I and II BA6348_08795 PF13291 ACT domain BA6348_08795 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_08800 PF03466 LysR substrate binding domain BA6348_08810 PF01047 MarR family BA6348_08810 PF00480 ROK family BA6348_08820 PF00005 ABC transporter BA6348_08820 PF08402 TOBE domain BA6348_08825 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_08840 PF00206 Lyase BA6348_08840 PF14698 Argininosuccinate lyase C-terminal BA6348_08845 PF01869 BadF/BadG/BcrA/BcrD ATPase family BA6348_08850 PF02585 GlcNAc-PI de-N-acetylase BA6348_08865 PF00881 Nitroreductase family BA6348_08905 PF01497 Periplasmic binding protein BA6348_08910 PF01032 FecCD transport family BA6348_08915 PF01032 FecCD transport family BA6348_08925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_08930 PF03060 Nitronate monooxygenase BA6348_08935 PF01979 Amidohydrolase family BA6348_08945 PF00668 Condensation domain BA6348_08945 PF00501 AMP-binding enzyme BA6348_08945 PF00550 Phosphopantetheine attachment site BA6348_08945 PF08242 Methyltransferase domain BA6348_08960 PF00294 pfkB family carbohydrate kinase BA6348_08965 PF03551 Transcriptional regulator PadR-like family BA6348_08965 PF10400 Virulence activator alpha C-term BA6348_08970 PF07724 AAA domain (Cdc48 subfamily) BA6348_08970 PF17871 AAA lid domain BA6348_08970 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_08970 PF10431 C-terminal, D2-small domain, of ClpB protein BA6348_08980 PF00392 Bacterial regulatory proteins, gntR family BA6348_08980 PF00155 Aminotransferase class I and II BA6348_08985 PF00392 Bacterial regulatory proteins, gntR family BA6348_08985 PF00155 Aminotransferase class I and II BA6348_08990 PF00892 EamA-like transporter family BA6348_08995 PF08402 TOBE domain BA6348_08995 PF00005 ABC transporter BA6348_09000 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_09005 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_09010 PF13416 Bacterial extracellular solute-binding protein BA6348_09015 PF00561 alpha/beta hydrolase fold BA6348_09055 PF03193 RsgA GTPase BA6348_09060 PF00156 Phosphoribosyl transferase domain BA6348_09065 PF00860 Permease family BA6348_09075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_09080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_09095 PF04542 Sigma-70 region 2 BA6348_09095 PF08281 Sigma-70, region 4 BA6348_09100 PF13800 Sigma factor regulator N-terminal BA6348_09100 PF13791 Sigma factor regulator C-terminal BA6348_09125 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_09130 PF03845 Spore germination protein BA6348_09135 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_09140 PF00350 Dynamin family BA6348_09145 PF00350 Dynamin family BA6348_09150 PF00474 Sodium:solute symporter family BA6348_09160 PF00313 'Cold-shock' DNA-binding domain BA6348_09170 PF00155 Aminotransferase class I and II BA6348_09170 PF00392 Bacterial regulatory proteins, gntR family BA6348_09175 PF00303 Thymidylate synthase BA6348_09180 PF00186 Dihydrofolate reductase BA6348_09185 PF01966 HD domain BA6348_09195 PF01546 Peptidase family M20/M25/M40 BA6348_09195 PF07687 Peptidase dimerisation domain BA6348_09200 PF14398 YheC/D like ATP-grasp BA6348_09235 PF00682 HMGL-like BA6348_09235 PF08502 LeuA allosteric (dimerisation) domain BA6348_09245 PF02801 Beta-ketoacyl synthase, C-terminal domain BA6348_09245 PF00109 Beta-ketoacyl synthase, N-terminal domain BA6348_09250 PF07690 Major Facilitator Superfamily BA6348_09260 PF01136 Peptidase family U32 BA6348_09260 PF12392 Collagenase BA6348_09280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_09280 PF08447 PAS fold BA6348_09280 PF13426 PAS domain BA6348_09285 PF04607 Region found in RelA / SpoT proteins BA6348_09290 PF01546 Peptidase family M20/M25/M40 BA6348_09295 PF00440 Bacterial regulatory proteins, tetR family BA6348_09300 PF07690 Major Facilitator Superfamily BA6348_09305 PF00270 DEAD/DEAH box helicase BA6348_09305 PF00271 Helicase conserved C-terminal domain BA6348_09310 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_09315 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_09315 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_09320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_09320 PF00005 ABC transporter BA6348_09325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_09325 PF00005 ABC transporter BA6348_09330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_09340 PF17126 RsmF rRNA methyltransferase first C-terminal domain BA6348_09340 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BA6348_09340 PF01189 16S rRNA methyltransferase RsmB/F BA6348_09350 PF08447 PAS fold BA6348_09350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_09350 PF13426 PAS domain BA6348_09365 PF13847 Methyltransferase domain BA6348_09365 PF03551 Transcriptional regulator PadR-like family BA6348_09370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_09375 PF06580 Histidine kinase BA6348_09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_09375 PF13492 GAF domain BA6348_09375 PF07694 5TMR of 5TMR-LYT BA6348_09380 PF04397 LytTr DNA-binding domain BA6348_09380 PF00072 Response regulator receiver domain BA6348_09390 PF13722 5TM C-terminal transporter carbon starvation CstA BA6348_09390 PF02554 Carbon starvation protein CstA BA6348_09400 PF00459 Inositol monophosphatase family BA6348_09405 PF00723 Glycosyl hydrolases family 15 BA6348_09425 PF00881 Nitroreductase family BA6348_09440 PF00005 ABC transporter BA6348_09445 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_09450 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_09455 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_09475 PF16326 ABC transporter C-terminal domain BA6348_09475 PF00005 ABC transporter BA6348_09475 PF12848 ABC transporter BA6348_09480 PF07690 Major Facilitator Superfamily BA6348_09505 PF02779 Transketolase, pyrimidine binding domain BA6348_09505 PF02780 Transketolase, C-terminal domain BA6348_09505 PF00456 Transketolase, thiamine diphosphate binding domain BA6348_09510 PF00912 Transglycosylase BA6348_09510 PF00905 Penicillin binding protein transpeptidase domain BA6348_09540 PF00005 ABC transporter BA6348_09560 PF00072 Response regulator receiver domain BA6348_09565 PF02390 Putative methyltransferase BA6348_09575 PF00877 NlpC/P60 family BA6348_09580 PF01522 Polysaccharide deacetylase BA6348_09595 PF00920 Dehydratase family BA6348_09610 PF00459 Inositol monophosphatase family BA6348_09640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA6348_09640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA6348_09650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_09655 PF01384 Phosphate transporter family BA6348_09660 PF01507 Phosphoadenosine phosphosulfate reductase family BA6348_09665 PF01747 ATP-sulfurylase BA6348_09665 PF14306 PUA-like domain BA6348_09680 PF17854 FtsK alpha domain BA6348_09680 PF01580 FtsK/SpoIIIE family BA6348_09680 PF09397 Ftsk gamma domain BA6348_09685 PF07690 Major Facilitator Superfamily BA6348_09690 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_09690 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_09690 PF01610 Transposase BA6348_09700 PF13229 Right handed beta helix region BA6348_09700 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BA6348_09700 PF12708 Pectate lyase superfamily protein BA6348_09705 PF01370 NAD dependent epimerase/dehydratase family BA6348_09710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA6348_09710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA6348_09710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA6348_09715 PF02719 Polysaccharide biosynthesis protein BA6348_09720 PF03816 Cell envelope-related transcriptional attenuator domain BA6348_09725 PF02706 Chain length determinant protein BA6348_09730 PF13614 AAA domain BA6348_09755 PF00534 Glycosyl transferases group 1 BA6348_09755 PF13477 Glycosyl transferase 4-like BA6348_09765 PF02397 Bacterial sugar transferase BA6348_09775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA6348_09790 PF08241 Methyltransferase domain BA6348_09795 PF02954 Bacterial regulatory protein, Fis family BA6348_09795 PF00072 Response regulator receiver domain BA6348_09795 PF00158 Sigma-54 interaction domain BA6348_09800 PF10502 Signal peptidase, peptidase S26 BA6348_09805 PF12833 Helix-turn-helix domain BA6348_09810 PF01175 Urocanase Rossmann-like domain BA6348_09810 PF17392 Urocanase C-terminal domain BA6348_09810 PF17391 Urocanase N-terminal domain BA6348_09815 PF01979 Amidohydrolase family BA6348_09820 PF00491 Arginase family BA6348_09845 PF00155 Aminotransferase class I and II BA6348_09845 PF00392 Bacterial regulatory proteins, gntR family BA6348_09855 PF00248 Aldo/keto reductase family BA6348_09870 PF09339 IclR helix-turn-helix domain BA6348_09870 PF01614 Bacterial transcriptional regulator BA6348_09895 PF01168 Alanine racemase, N-terminal domain BA6348_09895 PF01168 Alanine racemase, N-terminal domain BA6348_09895 PF00842 Alanine racemase, C-terminal domain BA6348_09895 PF00842 Alanine racemase, C-terminal domain BA6348_09900 PF13031 Protein of unknown function (DUF3892) BA6348_09910 PF00664 ABC transporter transmembrane region BA6348_09910 PF00005 ABC transporter BA6348_09920 PF00694 Aconitase C-terminal domain BA6348_09920 PF00330 Aconitase family (aconitate hydratase) BA6348_09925 PF00005 ABC transporter BA6348_09925 PF00664 ABC transporter transmembrane region BA6348_09930 PF00486 Transcriptional regulatory protein, C terminal BA6348_09930 PF00072 Response regulator receiver domain BA6348_09935 PF00512 His Kinase A (phospho-acceptor) domain BA6348_09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_09935 PF00989 PAS fold BA6348_09935 PF16736 Single Cache-like BA6348_09940 PF00899 ThiF family BA6348_09945 PF02391 MoaE protein BA6348_09955 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA BA6348_09960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BA6348_09960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA6348_09965 PF01967 MoaC family BA6348_09970 PF07690 Major Facilitator Superfamily BA6348_09975 PF00155 Aminotransferase class I and II BA6348_09990 PF01797 Transposase IS200 like BA6348_10000 PF08402 TOBE domain BA6348_10000 PF00005 ABC transporter BA6348_10010 PF00155 Aminotransferase class I and II BA6348_10035 PF13180 PDZ domain BA6348_10040 PF00239 Resolvase, N terminal domain BA6348_10040 PF02796 Helix-turn-helix domain of resolvase BA6348_10045 PF01638 HxlR-like helix-turn-helix BA6348_10065 PF02073 Thermophilic metalloprotease (M29) BA6348_10085 PF11009 Protein of unknown function (DUF2847) BA6348_10090 PF02491 SHS2 domain inserted in FTSA BA6348_10095 PF01817 Chorismate mutase type II BA6348_10095 PF00793 DAHP synthetase I family BA6348_10105 PF00356 Bacterial regulatory proteins, lacI family BA6348_10110 PF01048 Phosphorylase superfamily BA6348_10115 PF00850 Histone deacetylase domain BA6348_10120 PF00571 CBS domain BA6348_10125 PF00583 Acetyltransferase (GNAT) family BA6348_10130 PF00912 Transglycosylase BA6348_10130 PF00905 Penicillin binding protein transpeptidase domain BA6348_10140 PF07883 Cupin domain BA6348_10140 PF01381 Helix-turn-helix BA6348_10145 PF01479 S4 domain BA6348_10145 PF00163 Ribosomal protein S4/S9 N-terminal domain BA6348_10155 PF00300 Histidine phosphatase superfamily (branch 1) BA6348_10160 PF00990 Diguanylate cyclase, GGDEF domain BA6348_10165 PF00753 Metallo-beta-lactamase superfamily BA6348_10180 PF06160 Septation ring formation regulator, EzrA BA6348_10200 PF05343 M42 glutamyl aminopeptidase BA6348_10210 PF00083 Sugar (and other) transporter BA6348_10225 PF14034 Sporulation protein YtrH BA6348_10235 PF07070 SpoOM protein BA6348_10245 PF08222 CodY helix-turn-helix domain BA6348_10245 PF06018 CodY GAF-like domain BA6348_10250 PF07364 Metallopeptidase family M81 BA6348_10250 PF07171 MlrC C-terminus BA6348_10260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_10265 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_10275 PF00005 ABC transporter BA6348_10275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_10280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_10280 PF00005 ABC transporter BA6348_10285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA6348_10285 PF13378 Enolase C-terminal domain-like BA6348_10290 PF00144 Beta-lactamase BA6348_10290 PF11954 Domain of unknown function (DUF3471) BA6348_10310 PF07690 Major Facilitator Superfamily BA6348_10315 PF00106 short chain dehydrogenase BA6348_10325 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BA6348_10335 PF01931 Protein of unknown function DUF84 BA6348_10340 PF01678 Diaminopimelate epimerase BA6348_10345 PF01476 LysM domain BA6348_10345 PF06725 3D domain BA6348_10350 PF00266 Aminotransferase class-V BA6348_10355 PF02568 Thiamine biosynthesis protein (ThiI) BA6348_10355 PF02926 THUMP domain BA6348_10360 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA6348_10460 PF08447 PAS fold BA6348_10460 PF00512 His Kinase A (phospho-acceptor) domain BA6348_10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_10460 PF00989 PAS fold BA6348_10470 PF03741 Integral membrane protein TerC family BA6348_10480 PF00534 Glycosyl transferases group 1 BA6348_10480 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BA6348_10485 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA6348_10495 PF04239 Protein of unknown function (DUF421) BA6348_10500 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA6348_10505 PF07451 Stage V sporulation protein AD (SpoVAD) BA6348_10510 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA6348_10515 PF07486 Cell Wall Hydrolase BA6348_10515 PF01471 Putative peptidoglycan binding domain BA6348_10520 PF06725 3D domain BA6348_10520 PF01476 LysM domain BA6348_10530 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BA6348_10540 PF00289 Biotin carboxylase, N-terminal domain BA6348_10540 PF02785 Biotin carboxylase C-terminal domain BA6348_10540 PF00364 Biotin-requiring enzyme BA6348_10540 PF00682 HMGL-like BA6348_10540 PF02436 Conserved carboxylase domain BA6348_10540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA6348_10555 PF08534 Redoxin BA6348_10565 PF00753 Metallo-beta-lactamase superfamily BA6348_10585 PF00849 RNA pseudouridylate synthase BA6348_10590 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA6348_10595 PF04209 homogentisate 1,2-dioxygenase BA6348_10600 PF01613 Flavin reductase like domain BA6348_10615 PF00440 Bacterial regulatory proteins, tetR family BA6348_10620 PF00296 Luciferase-like monooxygenase BA6348_10630 PF00557 Metallopeptidase family M24 BA6348_10635 PF02540 NAD synthase BA6348_10655 PF09335 SNARE associated Golgi protein BA6348_10665 PF01966 HD domain BA6348_10690 PF07690 Major Facilitator Superfamily BA6348_10700 PF03816 Cell envelope-related transcriptional attenuator domain BA6348_10715 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_10715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA6348_10725 PF00753 Metallo-beta-lactamase superfamily BA6348_10730 PF07690 Major Facilitator Superfamily BA6348_10740 PF00005 ABC transporter BA6348_10745 PF12679 ABC-2 family transporter protein BA6348_10765 PF04542 Sigma-70 region 2 BA6348_10765 PF08281 Sigma-70, region 4 BA6348_10770 PF04851 Type III restriction enzyme, res subunit BA6348_10770 PF00271 Helicase conserved C-terminal domain BA6348_10775 PF01595 Cyclin M transmembrane N-terminal domain BA6348_10775 PF03471 Transporter associated domain BA6348_10775 PF00571 CBS domain BA6348_10790 PF02653 Branched-chain amino acid transport system / permease component BA6348_10795 PF00005 ABC transporter BA6348_10800 PF07690 Major Facilitator Superfamily BA6348_10805 PF12793 Sugar transport-related sRNA regulator N-term BA6348_10805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_10820 PF01975 Survival protein SurE BA6348_10850 PF01584 CheW-like domain BA6348_10865 PF00155 Aminotransferase class I and II BA6348_10865 PF00392 Bacterial regulatory proteins, gntR family BA6348_10875 PF03741 Integral membrane protein TerC family BA6348_10880 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_10885 PF00072 Response regulator receiver domain BA6348_10905 PF13361 UvrD-like helicase C-terminal domain BA6348_10905 PF00580 UvrD/REP helicase N-terminal domain BA6348_10910 PF03471 Transporter associated domain BA6348_10910 PF00571 CBS domain BA6348_10910 PF01595 Cyclin M transmembrane N-terminal domain BA6348_10915 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA6348_10915 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_10920 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA6348_10920 PF00753 Metallo-beta-lactamase superfamily BA6348_10930 PF02811 PHP domain BA6348_10940 PF00440 Bacterial regulatory proteins, tetR family BA6348_10945 PF13673 Acetyltransferase (GNAT) domain BA6348_10960 PF04608 Phosphatidylglycerophosphatase A BA6348_10980 PF00589 Phage integrase family BA6348_10980 PF02899 Phage integrase, N-terminal SAM-like domain BA6348_11000 PF10960 BhlA holin family BA6348_11070 PF02368 Bacterial Ig-like domain (group 2) BA6348_11080 PF00486 Transcriptional regulatory protein, C terminal BA6348_11080 PF00072 Response regulator receiver domain BA6348_11085 PF13426 PAS domain BA6348_11085 PF00512 His Kinase A (phospho-acceptor) domain BA6348_11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_11085 PF14827 Double sensory domain of two-component sensor kinase BA6348_11085 PF00672 HAMP domain BA6348_11095 PF01435 Peptidase family M48 BA6348_11120 PF01867 CRISPR associated protein Cas1 BA6348_11125 PF09827 CRISPR associated protein Cas2 BA6348_11135 PF00106 short chain dehydrogenase BA6348_11180 PF00892 EamA-like transporter family BA6348_11185 PF01037 Lrp/AsnC ligand binding domain BA6348_11200 PF07516 SecA Wing and Scaffold domain BA6348_11200 PF01043 SecA preprotein cross-linking domain BA6348_11200 PF02810 SEC-C motif BA6348_11200 PF07517 SecA DEAD-like domain BA6348_11205 PF12161 HsdM N-terminal domain BA6348_11205 PF02384 N-6 DNA Methylase BA6348_11210 PF01420 Type I restriction modification DNA specificity domain BA6348_11215 PF01593 Flavin containing amine oxidoreductase BA6348_11230 PF02824 TGS domain BA6348_11230 PF13291 ACT domain BA6348_11230 PF04607 Region found in RelA / SpoT proteins BA6348_11245 PF02954 Bacterial regulatory protein, Fis family BA6348_11245 PF13188 PAS domain BA6348_11245 PF00158 Sigma-54 interaction domain BA6348_11255 PF04229 GrpB protein BA6348_11255 PF13673 Acetyltransferase (GNAT) domain BA6348_11265 PF00072 Response regulator receiver domain BA6348_11265 PF00486 Transcriptional regulatory protein, C terminal BA6348_11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_11270 PF00512 His Kinase A (phospho-acceptor) domain BA6348_11270 PF00672 HAMP domain BA6348_11280 PF03413 Peptidase propeptide and YPEB domain BA6348_11285 PF01368 DHH family BA6348_11285 PF02833 DHHA2 domain BA6348_11290 PF07739 TipAS antibiotic-recognition domain BA6348_11290 PF13411 MerR HTH family regulatory protein BA6348_11325 PF03050 Transposase IS66 family BA6348_11325 PF13007 Transposase C of IS166 homeodomain BA6348_11325 PF13005 zinc-finger binding domain of transposase IS66 BA6348_11325 PF13817 IS66 C-terminal element BA6348_11330 PF07075 Protein of unknown function (DUF1343) BA6348_11365 PF00753 Metallo-beta-lactamase superfamily BA6348_11370 PF01497 Periplasmic binding protein BA6348_11375 PF01032 FecCD transport family BA6348_11380 PF00005 ABC transporter BA6348_11385 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BA6348_11390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA6348_11390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_11400 PF08239 Bacterial SH3 domain BA6348_11400 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_11415 PF01139 tRNA-splicing ligase RtcB BA6348_11425 PF02110 Hydroxyethylthiazole kinase family BA6348_11465 PF00580 UvrD/REP helicase N-terminal domain BA6348_11465 PF13361 UvrD-like helicase C-terminal domain BA6348_11480 PF01497 Periplasmic binding protein BA6348_11525 PF00892 EamA-like transporter family BA6348_11530 PF08543 Phosphomethylpyrimidine kinase BA6348_11535 PF02687 FtsX-like permease family BA6348_11535 PF12704 MacB-like periplasmic core domain BA6348_11535 PF00005 ABC transporter BA6348_11540 PF00005 ABC transporter BA6348_11540 PF02687 FtsX-like permease family BA6348_11540 PF12704 MacB-like periplasmic core domain BA6348_11545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA6348_11570 PF12787 EcsC protein family BA6348_11580 PF00258 Flavodoxin BA6348_11585 PF14602 Hexapeptide repeat of succinyl-transferase BA6348_11585 PF00132 Bacterial transferase hexapeptide (six repeats) BA6348_11585 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BA6348_11590 PF00202 Aminotransferase class-III BA6348_11595 PF01546 Peptidase family M20/M25/M40 BA6348_11595 PF07687 Peptidase dimerisation domain BA6348_11610 PF13457 GW (Gly-Tryp) dipeptide domain BA6348_11610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BA6348_11630 PF12146 Serine aminopeptidase, S33 BA6348_11645 PF01180 Dihydroorotate dehydrogenase BA6348_11650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BA6348_11650 PF01276 Orn/Lys/Arg decarboxylase, major domain BA6348_11655 PF03060 Nitronate monooxygenase BA6348_11660 PF06335 Protein of unknown function (DUF1054) BA6348_11685 PF02675 S-adenosylmethionine decarboxylase BA6348_11700 PF00255 Glutathione peroxidase BA6348_11730 PF01053 Cys/Met metabolism PLP-dependent enzyme BA6348_11735 PF01053 Cys/Met metabolism PLP-dependent enzyme BA6348_11740 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BA6348_11745 PF13638 PIN domain BA6348_11745 PF02562 PhoH-like protein BA6348_11770 PF00753 Metallo-beta-lactamase superfamily BA6348_11775 PF09587 Bacterial capsule synthesis protein PGA_cap BA6348_11790 PF11117 Protein of unknown function (DUF2626) BA6348_11800 PF03960 ArsC family BA6348_11805 PF00378 Enoyl-CoA hydratase/isomerase BA6348_11815 PF00583 Acetyltransferase (GNAT) family BA6348_11820 PF00289 Biotin carboxylase, N-terminal domain BA6348_11820 PF02785 Biotin carboxylase C-terminal domain BA6348_11820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA6348_11825 PF00364 Biotin-requiring enzyme BA6348_11830 PF00682 HMGL-like BA6348_11835 PF00378 Enoyl-CoA hydratase/isomerase BA6348_11840 PF01039 Carboxyl transferase domain BA6348_11850 PF02558 Ketopantoate reductase PanE/ApbA BA6348_11850 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA6348_11865 PF10079 Bacillithiol biosynthesis BshC BA6348_11880 PF07690 Major Facilitator Superfamily BA6348_11885 PF07729 FCD domain BA6348_11885 PF00392 Bacterial regulatory proteins, gntR family BA6348_11890 PF13520 Amino acid permease BA6348_11895 PF03466 LysR substrate binding domain BA6348_11895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_11900 PF05221 S-adenosyl-L-homocysteine hydrolase BA6348_11900 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BA6348_11905 PF02381 MraZ protein, putative antitoxin-like BA6348_11910 PF01795 MraW methylase family BA6348_11925 PF03793 PASTA domain BA6348_11925 PF03717 Penicillin-binding Protein dimerisation domain BA6348_11925 PF00905 Penicillin binding protein transpeptidase domain BA6348_11930 PF08245 Mur ligase middle domain BA6348_11930 PF02875 Mur ligase family, glutamate ligase domain BA6348_11930 PF01225 Mur ligase family, catalytic domain BA6348_11935 PF00953 Glycosyl transferase family 4 BA6348_11940 PF02875 Mur ligase family, glutamate ligase domain BA6348_11940 PF08245 Mur ligase middle domain BA6348_11945 PF01098 Cell cycle protein BA6348_11950 PF04101 Glycosyltransferase family 28 C-terminal domain BA6348_11950 PF03033 Glycosyltransferase family 28 N-terminal domain BA6348_11955 PF01565 FAD binding domain BA6348_11955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BA6348_11960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA6348_11965 PF03799 Cell division protein FtsQ BA6348_11965 PF08478 POTRA domain, FtsQ-type BA6348_11970 PF05949 Bacterial protein of unknown function (DUF881) BA6348_11980 PF06947 Protein of unknown function (DUF1290) BA6348_11985 PF01609 Transposase DDE domain BA6348_11990 PF02491 SHS2 domain inserted in FTSA BA6348_11995 PF12327 FtsZ family, C-terminal domain BA6348_11995 PF00091 Tubulin/FtsZ family, GTPase domain BA6348_12000 PF03419 Sporulation factor SpoIIGA BA6348_12005 PF04545 Sigma-70, region 4 BA6348_12005 PF04542 Sigma-70 region 2 BA6348_12010 PF04539 Sigma-70 region 3 BA6348_12010 PF04545 Sigma-70, region 4 BA6348_12010 PF04542 Sigma-70 region 2 BA6348_12015 PF05239 PRC-barrel domain BA6348_12025 PF01168 Alanine racemase, N-terminal domain BA6348_12030 PF04472 Cell division protein SepF BA6348_12035 PF02325 YGGT family BA6348_12040 PF17774 Putative RNA-binding domain in YlmH BA6348_12040 PF01479 S4 domain BA6348_12045 PF05103 DivIVA protein BA6348_12050 PF00133 tRNA synthetases class I (I, L, M and V) BA6348_12050 PF08264 Anticodon-binding domain of tRNA BA6348_12060 PF01258 Prokaryotic dksA/traR C4-type zinc finger BA6348_12065 PF13378 Enolase C-terminal domain-like BA6348_12065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BA6348_12070 PF07690 Major Facilitator Superfamily BA6348_12075 PF00293 NUDIX domain BA6348_12080 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_12085 PF03816 Cell envelope-related transcriptional attenuator domain BA6348_12110 PF10737 Spore germination protein GerPC BA6348_12115 PF10803 Spore germination GerPB BA6348_12120 PF10676 Spore germination protein gerPA/gerPF BA6348_12135 PF10720 Protein of unknown function (DUF2515) BA6348_12140 PF01131 DNA topoisomerase BA6348_12140 PF01751 Toprim domain BA6348_12145 PF04012 PspA/IM30 family BA6348_12170 PF03065 Glycosyl hydrolase family 57 BA6348_12170 PF09210 Domain of unknown function (DUF1957) BA6348_12175 PF00483 Nucleotidyl transferase BA6348_12195 PF01252 Signal peptidase (SPase) II BA6348_12200 PF01479 S4 domain BA6348_12200 PF00849 RNA pseudouridylate synthase BA6348_12215 PF00156 Phosphoribosyl transferase domain BA6348_12220 PF00860 Permease family BA6348_12225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA6348_12225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA6348_12230 PF01979 Amidohydrolase family BA6348_12235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BA6348_12235 PF00117 Glutamine amidotransferase class-I BA6348_12240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA6348_12240 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA6348_12240 PF02142 MGS-like domain BA6348_12245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BA6348_12250 PF00156 Phosphoribosyl transferase domain BA6348_12265 PF01022 Bacterial regulatory protein, arsR family BA6348_12275 PF01434 Peptidase family M41 BA6348_12275 PF06480 FtsH Extracellular BA6348_12275 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_12275 PF17862 AAA+ lid domain BA6348_12280 PF04199 Putative cyclase BA6348_12290 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BA6348_12290 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BA6348_12295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_12295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_12300 PF04199 Putative cyclase BA6348_12310 PF00742 Homoserine dehydrogenase BA6348_12310 PF01842 ACT domain BA6348_12310 PF03447 Homoserine dehydrogenase, NAD binding domain BA6348_12315 PF09587 Bacterial capsule synthesis protein PGA_cap BA6348_12325 PF00293 NUDIX domain BA6348_12330 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA6348_12330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA6348_12340 PF07301 Protein of unknown function (DUF1453) BA6348_12355 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family BA6348_12360 PF03745 Domain of unknown function (DUF309) BA6348_12375 PF07729 FCD domain BA6348_12375 PF00392 Bacterial regulatory proteins, gntR family BA6348_12390 PF02515 CoA-transferase family III BA6348_12395 PF00378 Enoyl-CoA hydratase/isomerase BA6348_12425 PF03755 YicC-like family, N-terminal region BA6348_12425 PF08340 Domain of unknown function (DUF1732) BA6348_12430 PF04025 Domain of unknown function (DUF370) BA6348_12435 PF00625 Guanylate kinase BA6348_12440 PF01192 RNA polymerase Rpb6 BA6348_12445 PF04127 DNA / pantothenate metabolism flavoprotein BA6348_12445 PF02441 Flavoprotein BA6348_12450 PF17764 3′ DNA-binding domain (3′BD) BA6348_12450 PF04851 Type III restriction enzyme, res subunit BA6348_12450 PF00271 Helicase conserved C-terminal domain BA6348_12450 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BA6348_12450 PF18074 Primosomal protein N C-terminal domain BA6348_12455 PF01327 Polypeptide deformylase BA6348_12460 PF00551 Formyl transferase BA6348_12460 PF02911 Formyl transferase, C-terminal domain BA6348_12465 PF01029 NusB family BA6348_12465 PF01189 16S rRNA methyltransferase RsmB/F BA6348_12470 PF04055 Radical SAM superfamily BA6348_12480 PF00069 Protein kinase domain BA6348_12480 PF03793 PASTA domain BA6348_12485 PF03193 RsgA GTPase BA6348_12485 PF16745 RsgA N-terminal domain BA6348_12490 PF00834 Ribulose-phosphate 3 epimerase family BA6348_12495 PF06271 RDD family BA6348_12500 PF01546 Peptidase family M20/M25/M40 BA6348_12500 PF07687 Peptidase dimerisation domain BA6348_12505 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_12510 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_12515 PF00005 ABC transporter BA6348_12520 PF09515 Thiamine transporter protein (Thia_YuaJ) BA6348_12525 PF08183 Stage V sporulation protein family BA6348_12530 PF00830 Ribosomal L28 family BA6348_12535 PF03780 Asp23 family, cell envelope-related function BA6348_12540 PF02734 DAK2 domain BA6348_12540 PF13684 Dihydroxyacetone kinase family BA6348_12545 PF02645 Uncharacterised protein, DegV family COG1307 BA6348_12550 PF03315 Serine dehydratase beta chain BA6348_12550 PF01842 ACT domain BA6348_12555 PF03313 Serine dehydratase alpha chain BA6348_12560 PF00271 Helicase conserved C-terminal domain BA6348_12560 PF00270 DEAD/DEAH box helicase BA6348_12560 PF17191 RecG wedge domain BA6348_12580 PF06445 GyrI-like small molecule binding domain BA6348_12580 PF12833 Helix-turn-helix domain BA6348_12585 PF11799 impB/mucB/samB family C-terminal domain BA6348_12585 PF00817 impB/mucB/samB family BA6348_12600 PF13529 Peptidase_C39 like family BA6348_12620 PF00005 ABC transporter BA6348_12620 PF12558 ATP-binding cassette cobalt transporter BA6348_12625 PF00005 ABC transporter BA6348_12625 PF00664 ABC transporter transmembrane region BA6348_12625 PF08021 Siderophore-interacting FAD-binding domain BA6348_12625 PF04954 Siderophore-interacting protein BA6348_12630 PF00664 ABC transporter transmembrane region BA6348_12630 PF00005 ABC transporter BA6348_12635 PF14040 Deoxyribonuclease NucA/NucB BA6348_12640 PF07690 Major Facilitator Superfamily BA6348_12645 PF07969 Amidohydrolase family BA6348_12655 PF03466 LysR substrate binding domain BA6348_12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_12660 PF09529 Integral membrane protein (intg_mem_TP0381) BA6348_12675 PF10415 Fumarase C C-terminus BA6348_12675 PF00206 Lyase BA6348_12680 PF01522 Polysaccharide deacetylase BA6348_12690 PF12419 SNF2 Helicase protein BA6348_12690 PF00271 Helicase conserved C-terminal domain BA6348_12690 PF00176 SNF2 family N-terminal domain BA6348_12695 PF01636 Phosphotransferase enzyme family BA6348_12700 PF13439 Glycosyltransferase Family 4 BA6348_12700 PF00534 Glycosyl transferases group 1 BA6348_12730 PF07726 ATPase family associated with various cellular activities (AAA) BA6348_12730 PF17863 AAA lid domain BA6348_12755 PF09992 Phosphodiester glycosidase BA6348_12755 PF12708 Pectate lyase superfamily protein BA6348_12770 PF02557 D-alanyl-D-alanine carboxypeptidase BA6348_12775 PF10502 Signal peptidase, peptidase S26 BA6348_12780 PF01047 MarR family BA6348_12790 PF02073 Thermophilic metalloprotease (M29) BA6348_12800 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BA6348_12805 PF02797 Chalcone and stilbene synthases, C-terminal domain BA6348_12805 PF00195 Chalcone and stilbene synthases, N-terminal domain BA6348_12815 PF07690 Major Facilitator Superfamily BA6348_12820 PF00563 EAL domain BA6348_12820 PF00990 Diguanylate cyclase, GGDEF domain BA6348_12820 PF13188 PAS domain BA6348_12820 PF03707 Bacterial signalling protein N terminal repeat BA6348_12830 PF01384 Phosphate transporter family BA6348_12840 PF01790 Prolipoprotein diacylglyceryl transferase BA6348_12845 PF04679 ATP dependent DNA ligase C terminal region BA6348_12845 PF01068 ATP dependent DNA ligase domain BA6348_12845 PF13298 DNA polymerase Ligase (LigD) BA6348_12850 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_12855 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_12870 PF04679 ATP dependent DNA ligase C terminal region BA6348_12870 PF01068 ATP dependent DNA ligase domain BA6348_12870 PF04675 DNA ligase N terminus BA6348_12880 PF13667 ThiC-associated domain BA6348_12880 PF01964 Radical SAM ThiC family BA6348_12885 PF01545 Cation efflux family BA6348_12885 PF16916 Dimerisation domain of Zinc Transporter BA6348_12890 PF02735 Ku70/Ku80 beta-barrel domain BA6348_12905 PF01467 Cytidylyltransferase-like BA6348_12910 PF07670 Nucleoside recognition BA6348_12915 PF01734 Patatin-like phospholipase BA6348_12920 PF13180 PDZ domain BA6348_12920 PF05362 Lon protease (S16) C-terminal proteolytic domain BA6348_12930 PF01783 Ribosomal L32p protein family BA6348_12935 PF08220 DeoR-like helix-turn-helix domain BA6348_12935 PF00455 DeoR C terminal sensor domain BA6348_12960 PF00005 ABC transporter BA6348_12965 PF03061 Thioesterase superfamily BA6348_12970 PF02504 Fatty acid synthesis protein BA6348_12975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA6348_12975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA6348_12980 PF00698 Acyl transferase domain BA6348_12990 PF00550 Phosphopantetheine attachment site BA6348_12995 PF02801 Beta-ketoacyl synthase, C-terminal domain BA6348_12995 PF00109 Beta-ketoacyl synthase, N-terminal domain BA6348_13000 PF00035 Double-stranded RNA binding motif BA6348_13000 PF14622 Ribonuclease-III-like BA6348_13005 PF02463 RecF/RecN/SMC N terminal domain BA6348_13005 PF06470 SMC proteins Flexible Hinge Domain BA6348_13010 PF02881 SRP54-type protein, helical bundle domain BA6348_13010 PF00448 SRP54-type protein, GTPase domain BA6348_13015 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BA6348_13020 PF02978 Signal peptide binding domain BA6348_13020 PF02881 SRP54-type protein, helical bundle domain BA6348_13020 PF00448 SRP54-type protein, GTPase domain BA6348_13025 PF00886 Ribosomal protein S16 BA6348_13035 PF11068 YlqD protein BA6348_13040 PF05239 PRC-barrel domain BA6348_13040 PF01782 RimM N-terminal domain BA6348_13045 PF01746 tRNA (Guanine-1)-methyltransferase BA6348_13050 PF01245 Ribosomal protein L19 BA6348_13055 PF10502 Signal peptidase, peptidase S26 BA6348_13060 PF01926 50S ribosome-binding GTPase BA6348_13065 PF01351 Ribonuclease HII BA6348_13075 PF01312 FlhB HrpN YscU SpaS Family BA6348_13080 PF02021 Uncharacterised protein family UPF0102 BA6348_13090 PF10127 RNA repair pathway DNA polymerase beta family BA6348_13105 PF13335 Magnesium chelatase, subunit ChlI C-terminal BA6348_13105 PF01078 Magnesium chelatase, subunit ChlI BA6348_13115 PF00563 EAL domain BA6348_13115 PF08668 HDOD domain BA6348_13125 PF00990 Diguanylate cyclase, GGDEF domain BA6348_13130 PF01906 Putative heavy-metal-binding BA6348_13150 PF08442 ATP-grasp domain BA6348_13150 PF00549 CoA-ligase BA6348_13155 PF02629 CoA binding domain BA6348_13155 PF00549 CoA-ligase BA6348_13160 PF17782 DprA winged helix domain BA6348_13160 PF02481 DNA recombination-mediator protein A BA6348_13165 PF01131 DNA topoisomerase BA6348_13165 PF01396 Topoisomerase DNA binding C4 zinc finger BA6348_13165 PF01751 Toprim domain BA6348_13170 PF01134 Glucose inhibited division protein A BA6348_13175 PF00589 Phage integrase family BA6348_13175 PF02899 Phage integrase, N-terminal SAM-like domain BA6348_13180 PF00227 Proteasome subunit BA6348_13185 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_13185 PF07724 AAA domain (Cdc48 subfamily) BA6348_13185 PF10431 C-terminal, D2-small domain, of ClpB protein BA6348_13190 PF06018 CodY GAF-like domain BA6348_13190 PF08222 CodY helix-turn-helix domain BA6348_13195 PF00460 Flagella basal body rod protein BA6348_13200 PF00460 Flagella basal body rod protein BA6348_13200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA6348_13205 PF02049 Flagellar hook-basal body complex protein FliE BA6348_13210 PF08345 Flagellar M-ring protein C-terminal BA6348_13210 PF01514 Secretory protein of YscJ/FliF family BA6348_13215 PF01706 FliG C-terminal domain BA6348_13215 PF14841 FliG middle domain BA6348_13215 PF14842 FliG N-terminal domain BA6348_13220 PF02108 Flagellar assembly protein FliH BA6348_13225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA6348_13225 PF18269 T3SS EscN ATPase C-terminal domain BA6348_13225 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA6348_13250 PF00460 Flagella basal body rod protein BA6348_13250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA6348_13265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA6348_13265 PF02154 Flagellar motor switch protein FliM BA6348_13270 PF04509 CheC-like family BA6348_13270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA6348_13275 PF00072 Response regulator receiver domain BA6348_13280 PF04347 Flagellar biosynthesis protein, FliO BA6348_13285 PF00813 FliP family BA6348_13290 PF01313 Bacterial export proteins, family 3 BA6348_13295 PF01311 Bacterial export proteins, family 1 BA6348_13300 PF01312 FlhB HrpN YscU SpaS Family BA6348_13305 PF00771 FHIPEP family BA6348_13310 PF00448 SRP54-type protein, GTPase domain BA6348_13315 PF10609 NUBPL iron-transfer P-loop NTPase BA6348_13320 PF01339 CheB methylesterase BA6348_13320 PF00072 Response regulator receiver domain BA6348_13325 PF07194 P2 response regulator binding domain BA6348_13325 PF01584 CheW-like domain BA6348_13325 PF02895 Signal transducing histidine kinase, homodimeric domain BA6348_13325 PF01627 Hpt domain BA6348_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_13330 PF01584 CheW-like domain BA6348_13335 PF04509 CheC-like family BA6348_13340 PF03975 CheD chemotactic sensory transduction BA6348_13350 PF04542 Sigma-70 region 2 BA6348_13350 PF04545 Sigma-70, region 4 BA6348_13350 PF04539 Sigma-70 region 3 BA6348_13375 PF00318 Ribosomal protein S2 BA6348_13380 PF00889 Elongation factor TS BA6348_13385 PF00696 Amino acid kinase family BA6348_13390 PF01765 Ribosome recycling factor BA6348_13395 PF01255 Putative undecaprenyl diphosphate synthase BA6348_13405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BA6348_13405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BA6348_13405 PF13288 DXP reductoisomerase C-terminal domain BA6348_13410 PF02163 Peptidase family M50 BA6348_13410 PF13180 PDZ domain BA6348_13415 PF04551 GcpE protein BA6348_13420 PF04073 Aminoacyl-tRNA editing domain BA6348_13420 PF03129 Anticodon binding domain BA6348_13420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA6348_13425 PF00929 Exonuclease BA6348_13425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA6348_13425 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA6348_13425 PF14579 Helix-hairpin-helix motif BA6348_13425 PF11490 DNA polymerase III polC-type N-terminus II BA6348_13425 PF02811 PHP domain BA6348_13425 PF14480 DNA polymerase III polC-type N-terminus I BA6348_13430 PF17384 RimP C-terminal SH3 domain BA6348_13430 PF02576 RimP N-terminal domain BA6348_13435 PF13184 NusA-like KH domain BA6348_13435 PF00575 S1 RNA binding domain BA6348_13435 PF08529 NusA N-terminal domain BA6348_13445 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BA6348_13450 PF04760 Translation initiation factor IF-2, N-terminal region BA6348_13450 PF00009 Elongation factor Tu GTP binding domain BA6348_13450 PF11987 Translation-initiation factor 2 BA6348_13450 PF04760 Translation initiation factor IF-2, N-terminal region BA6348_13450 PF11987 Translation-initiation factor 2 BA6348_13450 PF00009 Elongation factor Tu GTP binding domain BA6348_13460 PF02033 Ribosome-binding factor A BA6348_13465 PF02272 DHHA1 domain BA6348_13465 PF01368 DHH family BA6348_13470 PF01509 TruB family pseudouridylate synthase (N terminal domain) BA6348_13470 PF16198 tRNA pseudouridylate synthase B C-terminal domain BA6348_13475 PF06574 FAD synthetase BA6348_13475 PF01687 Riboflavin kinase BA6348_13480 PF00312 Ribosomal protein S15 BA6348_13485 PF00013 KH domain BA6348_13485 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BA6348_13485 PF03725 3' exoribonuclease family, domain 2 BA6348_13485 PF00575 S1 RNA binding domain BA6348_13485 PF01138 3' exoribonuclease family, domain 1 BA6348_13490 PF01522 Polysaccharide deacetylase BA6348_13495 PF05193 Peptidase M16 inactive domain BA6348_13495 PF00675 Insulinase (Peptidase family M16) BA6348_13505 PF16924 Dipicolinate synthase subunit A N-terminal domain BA6348_13505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA6348_13510 PF02441 Flavoprotein BA6348_13515 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA6348_13515 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA6348_13520 PF13840 ACT domain BA6348_13520 PF00696 Amino acid kinase family BA6348_13525 PF00701 Dihydrodipicolinate synthetase family BA6348_13530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA6348_13530 PF17770 Ribonuclease J C-terminal domain BA6348_13530 PF00753 Metallo-beta-lactamase superfamily BA6348_13535 PF00574 Clp protease BA6348_13545 PF17854 FtsK alpha domain BA6348_13545 PF09397 Ftsk gamma domain BA6348_13545 PF01580 FtsK/SpoIIIE family BA6348_13550 PF07702 UTRA domain BA6348_13550 PF00392 Bacterial regulatory proteins, gntR family BA6348_13575 PF01551 Peptidase family M23 BA6348_13580 PF05193 Peptidase M16 inactive domain BA6348_13585 PF00675 Insulinase (Peptidase family M16) BA6348_13585 PF05193 Peptidase M16 inactive domain BA6348_13595 PF11588 Protein of unknown function (DUF3243) BA6348_13600 PF11868 Protein of unknown function (DUF3388) BA6348_13605 PF13464 Domain of unknown function (DUF4115) BA6348_13610 PF00919 Uncharacterized protein family UPF0004 BA6348_13610 PF04055 Radical SAM superfamily BA6348_13610 PF18693 TRAM domain BA6348_13615 PF01066 CDP-alcohol phosphatidyltransferase BA6348_13620 PF00994 Probable molybdopterin binding domain BA6348_13620 PF18146 Damage-inducible protein CinA KH domain BA6348_13620 PF02464 Competence-damaged protein BA6348_13625 PF00271 Helicase conserved C-terminal domain BA6348_13625 PF00270 DEAD/DEAH box helicase BA6348_13630 PF00154 recA bacterial DNA recombination protein BA6348_13635 PF02631 RecX family BA6348_13640 PF12072 Domain of unknown function (DUF3552) BA6348_13640 PF00013 KH domain BA6348_13640 PF01966 HD domain BA6348_13645 PF13277 YmdB-like protein BA6348_13650 PF04232 Stage V sporulation protein S (SpoVS) BA6348_13660 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BA6348_13660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BA6348_13660 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BA6348_13665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA6348_13675 PF12706 Beta-lactamase superfamily domain BA6348_13680 PF06962 Putative rRNA methylase BA6348_13700 PF03099 Biotin/lipoate A/B protein ligase family BA6348_13705 PF00395 S-layer homology domain BA6348_13705 PF00331 Glycosyl hydrolase family 10 BA6348_13705 PF02018 Carbohydrate binding domain BA6348_13705 PF06452 Carbohydrate family 9 binding domain-like BA6348_13710 PF04055 Radical SAM superfamily BA6348_13710 PF00919 Uncharacterized protein family UPF0004 BA6348_13710 PF01938 TRAM domain BA6348_13715 PF06133 Control of competence regulator ComK, YlbF/YmcA BA6348_13720 PF10628 Outer spore coat protein E (CotE) BA6348_13730 PF00488 MutS domain V BA6348_13730 PF05192 MutS domain III BA6348_13730 PF05190 MutS family domain IV BA6348_13730 PF01624 MutS domain I BA6348_13735 PF01119 DNA mismatch repair protein, C-terminal domain BA6348_13735 PF08676 MutL C terminal dimerisation domain BA6348_13740 PF04445 Putative SAM-dependent methyltransferase BA6348_13750 PF17209 Hfq protein BA6348_13780 PF06983 3-demethylubiquinone-9 3-methyltransferase BA6348_13785 PF07690 Major Facilitator Superfamily BA6348_13795 PF05198 Translation initiation factor IF-3, N-terminal domain BA6348_13795 PF00707 Translation initiation factor IF-3, C-terminal domain BA6348_13805 PF17866 AAA lid domain BA6348_13805 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_13815 PF06838 Methionine gamma-lyase BA6348_13820 PF13411 MerR HTH family regulatory protein BA6348_13825 PF03951 Glutamine synthetase, beta-Grasp domain BA6348_13825 PF00120 Glutamine synthetase, catalytic domain BA6348_13835 PF00376 MerR family regulatory protein BA6348_13835 PF09278 MerR, DNA binding BA6348_13850 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_13850 PF01610 Transposase BA6348_13850 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_13885 PF00717 Peptidase S24-like BA6348_13885 PF01726 LexA DNA binding domain BA6348_13890 PF05257 CHAP domain BA6348_13890 PF01476 LysM domain BA6348_13895 PF05979 Bacterial protein of unknown function (DUF896) BA6348_13900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BA6348_13905 PF13538 UvrD-like helicase C-terminal domain BA6348_13910 PF01521 Iron-sulphur cluster biosynthesis BA6348_13915 PF01212 Beta-eliminating lyase BA6348_13935 PF00676 Dehydrogenase E1 component BA6348_13940 PF02779 Transketolase, pyrimidine binding domain BA6348_13940 PF02780 Transketolase, C-terminal domain BA6348_13945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA6348_13945 PF00364 Biotin-requiring enzyme BA6348_13945 PF02817 e3 binding domain BA6348_13950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA6348_13950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_13975 PF00005 ABC transporter BA6348_13975 PF12848 ABC transporter BA6348_13985 PF09992 Phosphodiester glycosidase BA6348_13985 PF12708 Pectate lyase superfamily protein BA6348_13990 PF00270 DEAD/DEAH box helicase BA6348_13990 PF00271 Helicase conserved C-terminal domain BA6348_13995 PF00324 Amino acid permease BA6348_14000 PF03793 PASTA domain BA6348_14000 PF00069 Protein kinase domain BA6348_14005 PF13039 Protein of unknown function (DUF3900) BA6348_14005 PF13037 Domain of unknown function (DUF3898) BA6348_14010 PF07285 Protein of unknown function (DUF1444) BA6348_14025 PF10720 Protein of unknown function (DUF2515) BA6348_14035 PF04284 Protein of unknown function (DUF441) BA6348_14055 PF01471 Putative peptidoglycan binding domain BA6348_14055 PF07486 Cell Wall Hydrolase BA6348_14065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA6348_14070 PF01053 Cys/Met metabolism PLP-dependent enzyme BA6348_14075 PF08281 Sigma-70, region 4 BA6348_14075 PF04542 Sigma-70 region 2 BA6348_14090 PF00005 ABC transporter BA6348_14100 PF13426 PAS domain BA6348_14100 PF13188 PAS domain BA6348_14100 PF00989 PAS fold BA6348_14100 PF00512 His Kinase A (phospho-acceptor) domain BA6348_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_14115 PF00986 DNA gyrase B subunit, carboxyl terminus BA6348_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_14115 PF00204 DNA gyrase B BA6348_14115 PF01751 Toprim domain BA6348_14120 PF00521 DNA gyrase/topoisomerase IV, subunit A BA6348_14120 PF03989 DNA gyrase C-terminal domain, beta-propeller BA6348_14135 PF00881 Nitroreductase family BA6348_14140 PF00149 Calcineurin-like phosphoesterase BA6348_14145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_14145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_14155 PF01047 MarR family BA6348_14160 PF07690 Major Facilitator Superfamily BA6348_14165 PF17866 AAA lid domain BA6348_14165 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_14170 PF00082 Subtilase family BA6348_14175 PF17853 GGDEF-like domain BA6348_14175 PF05651 Putative sugar diacid recognition BA6348_14175 PF13556 PucR C-terminal helix-turn-helix domain BA6348_14180 PF00171 Aldehyde dehydrogenase family BA6348_14185 PF00202 Aminotransferase class-III BA6348_14190 PF03819 MazG nucleotide pyrophosphohydrolase domain BA6348_14195 PF03641 Possible lysine decarboxylase BA6348_14220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BA6348_14220 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_14225 PF01180 Dihydroorotate dehydrogenase BA6348_14230 PF01979 Amidohydrolase family BA6348_14235 PF00795 Carbon-nitrogen hydrolase BA6348_14245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_14245 PF00672 HAMP domain BA6348_14245 PF02743 Cache domain BA6348_14250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BA6348_14255 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BA6348_14260 PF17203 Single cache domain 3 BA6348_14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_14260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA6348_14260 PF00989 PAS fold BA6348_14265 PF12431 Transcriptional regulator BA6348_14265 PF00072 Response regulator receiver domain BA6348_14280 PF01970 Tripartite tricarboxylate transporter TctA family BA6348_14300 PF02581 Thiamine monophosphate synthase BA6348_14305 PF02581 Thiamine monophosphate synthase BA6348_14320 PF00512 His Kinase A (phospho-acceptor) domain BA6348_14320 PF00989 PAS fold BA6348_14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_14330 PF00072 Response regulator receiver domain BA6348_14330 PF00196 Bacterial regulatory proteins, luxR family BA6348_14335 PF07730 Histidine kinase BA6348_14345 PF00873 AcrB/AcrD/AcrF family BA6348_14355 PF02683 Cytochrome C biogenesis protein transmembrane region BA6348_14360 PF00578 AhpC/TSA family BA6348_14370 PF14174 YycC-like protein BA6348_14415 PF01381 Helix-turn-helix BA6348_14420 PF12833 Helix-turn-helix domain BA6348_14420 PF06719 AraC-type transcriptional regulator N-terminus BA6348_14425 PF00296 Luciferase-like monooxygenase BA6348_14470 PF13185 GAF domain BA6348_14475 PF01625 Peptide methionine sulfoxide reductase BA6348_14500 PF01596 O-methyltransferase BA6348_14525 PF01758 Sodium Bile acid symporter family BA6348_14590 PF00756 Putative esterase BA6348_14595 PF07972 NrdI Flavodoxin like BA6348_14600 PF02867 Ribonucleotide reductase, barrel domain BA6348_14600 PF00317 Ribonucleotide reductase, all-alpha domain BA6348_14600 PF08343 Ribonucleotide reductase N-terminal BA6348_14605 PF00268 Ribonucleotide reductase, small chain BA6348_14610 PF05525 Branched-chain amino acid transport protein BA6348_14615 PF01717 Cobalamin-independent synthase, Catalytic domain BA6348_14615 PF08267 Cobalamin-independent synthase, N-terminal domain BA6348_14620 PF03061 Thioesterase superfamily BA6348_14635 PF09587 Bacterial capsule synthesis protein PGA_cap BA6348_14645 PF00501 AMP-binding enzyme BA6348_14645 PF13193 AMP-binding enzyme C-terminal domain BA6348_14665 PF00085 Thioredoxin BA6348_14670 PF00704 Glycosyl hydrolases family 18 BA6348_14670 PF01476 LysM domain BA6348_14685 PF02272 DHHA1 domain BA6348_14685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA6348_14685 PF01411 tRNA synthetases class II (A) BA6348_14690 PF08810 Kinase associated protein B BA6348_14695 PF02597 ThiS family BA6348_14700 PF05690 Thiazole biosynthesis protein ThiG BA6348_14705 PF01546 Peptidase family M20/M25/M40 BA6348_14705 PF07687 Peptidase dimerisation domain BA6348_14710 PF03070 TENA/THI-4/PQQC family BA6348_14715 PF00005 ABC transporter BA6348_14720 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_14725 PF09084 NMT1/THI5 like BA6348_14730 PF01022 Bacterial regulatory protein, arsR family BA6348_14735 PF07853 Protein of unknown function (DUF1648) BA6348_14735 PF13630 SdpI/YhfL protein family BA6348_14750 PF00005 ABC transporter BA6348_14750 PF13732 Domain of unknown function (DUF4162) BA6348_14780 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BA6348_14785 PF02615 Malate/L-lactate dehydrogenase BA6348_14800 PF05525 Branched-chain amino acid transport protein BA6348_14805 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_14815 PF03845 Spore germination protein BA6348_14820 PF03845 Spore germination protein BA6348_14825 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_14830 PF13187 4Fe-4S dicluster domain BA6348_14830 PF01645 Conserved region in glutamate synthase BA6348_14835 PF09844 Uncharacterized conserved protein (COG2071) BA6348_14840 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_14850 PF00892 EamA-like transporter family BA6348_14860 PF01327 Polypeptide deformylase BA6348_14870 PF00188 Cysteine-rich secretory protein family BA6348_14880 PF00313 'Cold-shock' DNA-binding domain BA6348_14905 PF00199 Catalase BA6348_14905 PF06628 Catalase-related immune-responsive BA6348_14920 PF11208 Protein of unknown function (DUF2992) BA6348_14935 PF00563 EAL domain BA6348_14935 PF00990 Diguanylate cyclase, GGDEF domain BA6348_14935 PF03707 Bacterial signalling protein N terminal repeat BA6348_14940 PF01272 Transcription elongation factor, GreA/GreB, C-term BA6348_14940 PF03449 Transcription elongation factor, N-terminal BA6348_14950 PF00248 Aldo/keto reductase family BA6348_14955 PF00158 Sigma-54 interaction domain BA6348_14955 PF01590 GAF domain BA6348_14960 PF00676 Dehydrogenase E1 component BA6348_14965 PF02779 Transketolase, pyrimidine binding domain BA6348_14965 PF02780 Transketolase, C-terminal domain BA6348_14970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA6348_14970 PF00364 Biotin-requiring enzyme BA6348_14970 PF02817 e3 binding domain BA6348_14975 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_14975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA6348_14980 PF13187 4Fe-4S dicluster domain BA6348_14980 PF01645 Conserved region in glutamate synthase BA6348_14985 PF17329 Family of unknown function (DUF5367) BA6348_14990 PF12833 Helix-turn-helix domain BA6348_14990 PF01497 Periplasmic binding protein BA6348_14995 PF01497 Periplasmic binding protein BA6348_15000 PF00067 Cytochrome P450 BA6348_15020 PF00501 AMP-binding enzyme BA6348_15020 PF00550 Phosphopantetheine attachment site BA6348_15020 PF00668 Condensation domain BA6348_15020 PF13193 AMP-binding enzyme C-terminal domain BA6348_15030 PF14765 Polyketide synthase dehydratase BA6348_15030 PF16197 Ketoacyl-synthetase C-terminal extension BA6348_15030 PF00109 Beta-ketoacyl synthase, N-terminal domain BA6348_15030 PF00550 Phosphopantetheine attachment site BA6348_15030 PF02801 Beta-ketoacyl synthase, C-terminal domain BA6348_15030 PF08659 KR domain BA6348_15035 PF00550 Phosphopantetheine attachment site BA6348_15035 PF02801 Beta-ketoacyl synthase, C-terminal domain BA6348_15035 PF00109 Beta-ketoacyl synthase, N-terminal domain BA6348_15035 PF16197 Ketoacyl-synthetase C-terminal extension BA6348_15035 PF00668 Condensation domain BA6348_15035 PF13193 AMP-binding enzyme C-terminal domain BA6348_15035 PF00501 AMP-binding enzyme BA6348_15035 PF00202 Aminotransferase class-III BA6348_15040 PF00698 Acyl transferase domain BA6348_15040 PF00668 Condensation domain BA6348_15040 PF00109 Beta-ketoacyl synthase, N-terminal domain BA6348_15040 PF16197 Ketoacyl-synthetase C-terminal extension BA6348_15040 PF02801 Beta-ketoacyl synthase, C-terminal domain BA6348_15040 PF00550 Phosphopantetheine attachment site BA6348_15045 PF01220 Dehydroquinase class II BA6348_15050 PF17760 UvrA interaction domain BA6348_15050 PF17755 UvrA DNA-binding domain BA6348_15050 PF00005 ABC transporter BA6348_15060 PF00668 Condensation domain BA6348_15060 PF13193 AMP-binding enzyme C-terminal domain BA6348_15060 PF00501 AMP-binding enzyme BA6348_15060 PF00550 Phosphopantetheine attachment site BA6348_15065 PF13193 AMP-binding enzyme C-terminal domain BA6348_15065 PF16197 Ketoacyl-synthetase C-terminal extension BA6348_15065 PF02801 Beta-ketoacyl synthase, C-terminal domain BA6348_15065 PF00550 Phosphopantetheine attachment site BA6348_15065 PF00668 Condensation domain BA6348_15065 PF00109 Beta-ketoacyl synthase, N-terminal domain BA6348_15065 PF00202 Aminotransferase class-III BA6348_15065 PF00501 AMP-binding enzyme BA6348_15075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_15075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_15080 PF01047 MarR family BA6348_15080 PF00480 ROK family BA6348_15085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA6348_15090 PF00975 Thioesterase domain BA6348_15090 PF00501 AMP-binding enzyme BA6348_15090 PF13193 AMP-binding enzyme C-terminal domain BA6348_15090 PF00668 Condensation domain BA6348_15090 PF00550 Phosphopantetheine attachment site BA6348_15095 PF00668 Condensation domain BA6348_15095 PF00501 AMP-binding enzyme BA6348_15095 PF00550 Phosphopantetheine attachment site BA6348_15095 PF13193 AMP-binding enzyme C-terminal domain BA6348_15100 PF13302 Acetyltransferase (GNAT) domain BA6348_15105 PF01648 4'-phosphopantetheinyl transferase superfamily BA6348_15110 PF02357 Transcription termination factor nusG BA6348_15120 PF00501 AMP-binding enzyme BA6348_15120 PF13193 AMP-binding enzyme C-terminal domain BA6348_15120 PF00550 Phosphopantetheine attachment site BA6348_15120 PF00668 Condensation domain BA6348_15125 PF13193 AMP-binding enzyme C-terminal domain BA6348_15125 PF00550 Phosphopantetheine attachment site BA6348_15125 PF00668 Condensation domain BA6348_15125 PF00501 AMP-binding enzyme BA6348_15130 PF00975 Thioesterase domain BA6348_15130 PF00550 Phosphopantetheine attachment site BA6348_15130 PF00668 Condensation domain BA6348_15130 PF13193 AMP-binding enzyme C-terminal domain BA6348_15130 PF00501 AMP-binding enzyme BA6348_15135 PF00005 ABC transporter BA6348_15135 PF00664 ABC transporter transmembrane region BA6348_15140 PF00664 ABC transporter transmembrane region BA6348_15140 PF00005 ABC transporter BA6348_15145 PF00975 Thioesterase domain BA6348_15155 PF17755 UvrA DNA-binding domain BA6348_15155 PF17760 UvrA interaction domain BA6348_15155 PF00005 ABC transporter BA6348_15160 PF04072 Leucine carboxyl methyltransferase BA6348_15180 PF01048 Phosphorylase superfamily BA6348_15195 PF07943 Penicillin-binding protein 5, C-terminal domain BA6348_15195 PF00768 D-alanyl-D-alanine carboxypeptidase BA6348_15200 PF04607 Region found in RelA / SpoT proteins BA6348_15205 PF10145 Phage-related minor tail protein BA6348_15205 PF01464 Transglycosylase SLT domain BA6348_15205 PF01551 Peptidase family M23 BA6348_15215 PF00269 Small, acid-soluble spore proteins, alpha/beta type BA6348_15220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA6348_15220 PF01367 5'-3' exonuclease, C-terminal SAM fold BA6348_15240 PF07728 AAA domain (dynein-related subfamily) BA6348_15240 PF12592 Protein of unknown function (DUF3763) BA6348_15240 PF17868 AAA lid domain BA6348_15275 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BA6348_15305 PF07690 Major Facilitator Superfamily BA6348_15310 PF01497 Periplasmic binding protein BA6348_15315 PF02195 ParB-like nuclease domain BA6348_15320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA6348_15320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA6348_15325 PF03328 HpcH/HpaI aldolase/citrate lyase family BA6348_15330 PF06276 Ferric iron reductase FhuF-like transporter BA6348_15330 PF04183 IucA / IucC family BA6348_15335 PF06276 Ferric iron reductase FhuF-like transporter BA6348_15335 PF04183 IucA / IucC family BA6348_15340 PF00083 Sugar (and other) transporter BA6348_15340 PF07690 Major Facilitator Superfamily BA6348_15345 PF06276 Ferric iron reductase FhuF-like transporter BA6348_15345 PF04183 IucA / IucC family BA6348_15350 PF02423 Ornithine cyclodeaminase/mu-crystallin family BA6348_15355 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_15375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA6348_15375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA6348_15380 PF00563 EAL domain BA6348_15380 PF12792 CSS motif domain associated with EAL BA6348_15385 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA6348_15390 PF01758 Sodium Bile acid symporter family BA6348_15395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_15400 PF01022 Bacterial regulatory protein, arsR family BA6348_15405 PF03534 Salmonella virulence plasmid 65kDa B protein BA6348_15405 PF12255 Insecticide toxin TcdB middle/C-terminal region BA6348_15405 PF12256 Insecticide toxin TcdB middle/N-terminal region BA6348_15415 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_15420 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_15425 PF01547 Bacterial extracellular solute-binding protein BA6348_15430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_15430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_15435 PF01261 Xylose isomerase-like TIM barrel BA6348_15440 PF00356 Bacterial regulatory proteins, lacI family BA6348_15445 PF13426 PAS domain BA6348_15445 PF13188 PAS domain BA6348_15445 PF00989 PAS fold BA6348_15445 PF00512 His Kinase A (phospho-acceptor) domain BA6348_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_15455 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_15455 PF00107 Zinc-binding dehydrogenase BA6348_15460 PF00171 Aldehyde dehydrogenase family BA6348_15465 PF13426 PAS domain BA6348_15465 PF00158 Sigma-54 interaction domain BA6348_15465 PF02954 Bacterial regulatory protein, Fis family BA6348_15470 PF00072 Response regulator receiver domain BA6348_15470 PF08664 YcbB domain BA6348_15485 PF04960 Glutaminase BA6348_15490 PF01235 Sodium:alanine symporter family BA6348_15505 PF02311 AraC-like ligand binding domain BA6348_15505 PF12833 Helix-turn-helix domain BA6348_15515 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BA6348_15515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA6348_15520 PF01380 SIS domain BA6348_15520 PF01418 Helix-turn-helix domain, rpiR family BA6348_15525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA6348_15525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA6348_15530 PF02447 GntP family permease BA6348_15540 PF13302 Acetyltransferase (GNAT) domain BA6348_15550 PF01493 GXGXG motif BA6348_15550 PF01645 Conserved region in glutamate synthase BA6348_15550 PF00310 Glutamine amidotransferases class-II BA6348_15550 PF04898 Glutamate synthase central domain BA6348_15555 PF03466 LysR substrate binding domain BA6348_15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_15560 PF13508 Acetyltransferase (GNAT) domain BA6348_15560 PF00583 Acetyltransferase (GNAT) family BA6348_15565 PF03180 NLPA lipoprotein BA6348_15570 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_15575 PF00005 ABC transporter BA6348_15575 PF09383 NIL domain BA6348_15590 PF03180 NLPA lipoprotein BA6348_15595 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_15600 PF00005 ABC transporter BA6348_15600 PF09383 NIL domain BA6348_15605 PF00462 Glutaredoxin BA6348_15610 PF00296 Luciferase-like monooxygenase BA6348_15615 PF00814 Glycoprotease family BA6348_15615 PF00583 Acetyltransferase (GNAT) family BA6348_15620 PF00296 Luciferase-like monooxygenase BA6348_15625 PF04073 Aminoacyl-tRNA editing domain BA6348_15630 PF13936 Helix-turn-helix domain BA6348_15630 PF00665 Integrase core domain BA6348_15645 PF03301 Tryptophan 2,3-dioxygenase BA6348_15650 PF01979 Amidohydrolase family BA6348_15655 PF09335 SNARE associated Golgi protein BA6348_15660 PF02080 TrkA-C domain BA6348_15665 PF00999 Sodium/hydrogen exchanger family BA6348_15670 PF00881 Nitroreductase family BA6348_15690 PF18766 SWI2/SNF2 ATPase BA6348_15690 PF12008 Type I restriction and modification enzyme - subunit R C terminal BA6348_15690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BA6348_15695 PF01420 Type I restriction modification DNA specificity domain BA6348_15705 PF12161 HsdM N-terminal domain BA6348_15705 PF02384 N-6 DNA Methylase BA6348_15725 PF02785 Biotin carboxylase C-terminal domain BA6348_15725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA6348_15725 PF00289 Biotin carboxylase, N-terminal domain BA6348_15730 PF00364 Biotin-requiring enzyme BA6348_15735 PF01039 Carboxyl transferase domain BA6348_15745 PF02310 B12 binding domain BA6348_15745 PF01642 Methylmalonyl-CoA mutase BA6348_15750 PF01642 Methylmalonyl-CoA mutase BA6348_15755 PF00364 Biotin-requiring enzyme BA6348_15760 PF00440 Bacterial regulatory proteins, tetR family BA6348_15765 PF02557 D-alanyl-D-alanine carboxypeptidase BA6348_15770 PF01758 Sodium Bile acid symporter family BA6348_15775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_15780 PF01641 SelR domain BA6348_15780 PF01625 Peptide methionine sulfoxide reductase BA6348_15785 PF07687 Peptidase dimerisation domain BA6348_15785 PF01546 Peptidase family M20/M25/M40 BA6348_15790 PF00326 Prolyl oligopeptidase family BA6348_15790 PF07676 WD40-like Beta Propeller Repeat BA6348_15795 PF00326 Prolyl oligopeptidase family BA6348_15795 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BA6348_15795 PF07676 WD40-like Beta Propeller Repeat BA6348_15800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_15805 PF00005 ABC transporter BA6348_15805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_15810 PF00005 ABC transporter BA6348_15810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_15815 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_15815 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_15820 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_15830 PF00892 EamA-like transporter family BA6348_15835 PF00296 Luciferase-like monooxygenase BA6348_15840 PF01757 Acyltransferase family BA6348_15855 PF00394 Multicopper oxidase BA6348_15855 PF07731 Multicopper oxidase BA6348_15855 PF07732 Multicopper oxidase BA6348_15860 PF13307 Helicase C-terminal domain BA6348_15875 PF01432 Peptidase family M3 BA6348_15875 PF08439 Oligopeptidase F BA6348_15880 PF02073 Thermophilic metalloprotease (M29) BA6348_15885 PF10372 Bacterial membrane-spanning protein N-terminus BA6348_15885 PF02457 DisA bacterial checkpoint controller nucleotide-binding BA6348_15890 PF03746 LamB/YcsF family BA6348_15895 PF02626 Carboxyltransferase domain, subdomain A and B BA6348_15900 PF02682 Carboxyltransferase domain, subdomain C and D BA6348_15905 PF01470 Pyroglutamyl peptidase BA6348_15910 PF09339 IclR helix-turn-helix domain BA6348_15910 PF01614 Bacterial transcriptional regulator BA6348_15930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_15930 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA6348_15945 PF12419 SNF2 Helicase protein BA6348_15945 PF00271 Helicase conserved C-terminal domain BA6348_15945 PF00176 SNF2 family N-terminal domain BA6348_15950 PF00512 His Kinase A (phospho-acceptor) domain BA6348_15950 PF13426 PAS domain BA6348_15950 PF13188 PAS domain BA6348_15950 PF00989 PAS fold BA6348_15950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_15975 PF07690 Major Facilitator Superfamily BA6348_15980 PF01810 LysE type translocator BA6348_15985 PF13426 PAS domain BA6348_15985 PF00512 His Kinase A (phospho-acceptor) domain BA6348_15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_15985 PF00672 HAMP domain BA6348_15990 PF00486 Transcriptional regulatory protein, C terminal BA6348_15990 PF00072 Response regulator receiver domain BA6348_15995 PF09335 SNARE associated Golgi protein BA6348_16000 PF06445 GyrI-like small molecule binding domain BA6348_16010 PF13280 WYL domain BA6348_16010 PF08279 HTH domain BA6348_16020 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BA6348_16025 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BA6348_16030 PF00072 Response regulator receiver domain BA6348_16030 PF03861 ANTAR domain BA6348_16040 PF02082 Transcriptional regulator BA6348_16055 PF01230 HIT domain BA6348_16065 PF00704 Glycosyl hydrolases family 18 BA6348_16080 PF01370 NAD dependent epimerase/dehydratase family BA6348_16085 PF00155 Aminotransferase class I and II BA6348_16095 PF00589 Phage integrase family BA6348_16095 PF13495 Phage integrase, N-terminal SAM-like domain BA6348_16100 PF05067 Manganese containing catalase BA6348_16110 PF00905 Penicillin binding protein transpeptidase domain BA6348_16110 PF00912 Transglycosylase BA6348_16115 PF13193 AMP-binding enzyme C-terminal domain BA6348_16115 PF00501 AMP-binding enzyme BA6348_16125 PF01557 Fumarylacetoacetate (FAA) hydrolase family BA6348_16135 PF04294 VanW like protein BA6348_16145 PF00391 PEP-utilising enzyme, mobile domain BA6348_16145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BA6348_16160 PF01497 Periplasmic binding protein BA6348_16160 PF12833 Helix-turn-helix domain BA6348_16180 PF01476 LysM domain BA6348_16180 PF08239 Bacterial SH3 domain BA6348_16180 PF01476 LysM domain BA6348_16180 PF08239 Bacterial SH3 domain BA6348_16180 PF00877 NlpC/P60 family BA6348_16180 PF00877 NlpC/P60 family BA6348_16190 PF01432 Peptidase family M3 BA6348_16190 PF08439 Oligopeptidase F BA6348_16195 PF01546 Peptidase family M20/M25/M40 BA6348_16195 PF07687 Peptidase dimerisation domain BA6348_16200 PF03576 Peptidase family S58 BA6348_16205 PF12822 ECF transporter, substrate-specific component BA6348_16210 PF02361 Cobalt transport protein BA6348_16215 PF00005 ABC transporter BA6348_16220 PF00005 ABC transporter BA6348_16225 PF00158 Sigma-54 interaction domain BA6348_16225 PF00989 PAS fold BA6348_16225 PF02954 Bacterial regulatory protein, Fis family BA6348_16240 PF00583 Acetyltransferase (GNAT) family BA6348_16245 PF00583 Acetyltransferase (GNAT) family BA6348_16245 PF00795 Carbon-nitrogen hydrolase BA6348_16250 PF07687 Peptidase dimerisation domain BA6348_16250 PF01546 Peptidase family M20/M25/M40 BA6348_16255 PF07969 Amidohydrolase family BA6348_16260 PF00474 Sodium:solute symporter family BA6348_16265 PF11755 Protein of unknown function (DUF3311) BA6348_16270 PF17853 GGDEF-like domain BA6348_16270 PF07905 Purine catabolism regulatory protein-like family BA6348_16270 PF13556 PucR C-terminal helix-turn-helix domain BA6348_16280 PF12848 ABC transporter BA6348_16280 PF00005 ABC transporter BA6348_16285 PF17850 CysA C-terminal regulatory domain BA6348_16285 PF12857 TOBE-like domain BA6348_16285 PF00005 ABC transporter BA6348_16290 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_16295 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_16320 PF00692 dUTPase BA6348_16335 PF09297 NADH pyrophosphatase zinc ribbon domain BA6348_16335 PF00293 NUDIX domain BA6348_16340 PF13419 Haloacid dehalogenase-like hydrolase BA6348_16345 PF01425 Amidase BA6348_16370 PF00583 Acetyltransferase (GNAT) family BA6348_16400 PF00795 Carbon-nitrogen hydrolase BA6348_16410 PF00849 RNA pseudouridylate synthase BA6348_16410 PF01479 S4 domain BA6348_16415 PF00085 Thioredoxin BA6348_16420 PF03466 LysR substrate binding domain BA6348_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_16425 PF00330 Aconitase family (aconitate hydratase) BA6348_16430 PF00694 Aconitase C-terminal domain BA6348_16435 PF00583 Acetyltransferase (GNAT) family BA6348_16440 PF00501 AMP-binding enzyme BA6348_16440 PF13193 AMP-binding enzyme C-terminal domain BA6348_16450 PF04461 Protein of unknown function (DUF520) BA6348_16460 PF00873 AcrB/AcrD/AcrF family BA6348_16470 PF08439 Oligopeptidase F BA6348_16470 PF01432 Peptidase family M3 BA6348_16475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA6348_16475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA6348_16475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA6348_16480 PF13439 Glycosyltransferase Family 4 BA6348_16480 PF00534 Glycosyl transferases group 1 BA6348_16485 PF01370 NAD dependent epimerase/dehydratase family BA6348_16490 PF00535 Glycosyl transferase family 2 BA6348_16495 PF00483 Nucleotidyl transferase BA6348_16500 PF13579 Glycosyl transferase 4-like domain BA6348_16500 PF00534 Glycosyl transferases group 1 BA6348_16510 PF07261 Replication initiation and membrane attachment BA6348_16515 PF01336 OB-fold nucleic acid binding domain BA6348_16515 PF00152 tRNA synthetases class II (D, K and N) BA6348_16530 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_16530 PF17862 AAA+ lid domain BA6348_16530 PF01434 Peptidase family M41 BA6348_16530 PF06480 FtsH Extracellular BA6348_16550 PF01979 Amidohydrolase family BA6348_16555 PF06971 Putative DNA-binding protein N-terminus BA6348_16555 PF02629 CoA binding domain BA6348_16565 PF13307 Helicase C-terminal domain BA6348_16565 PF04851 Type III restriction enzyme, res subunit BA6348_16565 PF00929 Exonuclease BA6348_16575 PF02261 Aspartate decarboxylase BA6348_16580 PF02569 Pantoate-beta-alanine ligase BA6348_16585 PF02548 Ketopantoate hydroxymethyltransferase BA6348_16590 PF03099 Biotin/lipoate A/B protein ligase family BA6348_16590 PF08279 HTH domain BA6348_16590 PF02237 Biotin protein ligase C terminal domain BA6348_16595 PF01743 Poly A polymerase head domain BA6348_16595 PF12627 Probable RNA and SrmB- binding site of polymerase A BA6348_16595 PF13735 tRNA nucleotidyltransferase domain 2 putative BA6348_16600 PF13439 Glycosyltransferase Family 4 BA6348_16600 PF00534 Glycosyl transferases group 1 BA6348_16605 PF02585 GlcNAc-PI de-N-acetylase BA6348_16610 PF02142 MGS-like domain BA6348_16615 PF05173 Dihydrodipicolinate reductase, C-terminus BA6348_16615 PF01113 Dihydrodipicolinate reductase, N-terminus BA6348_16620 PF03819 MazG nucleotide pyrophosphohydrolase domain BA6348_16625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_16625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA6348_16640 PF00032 Cytochrome b(C-terminal)/b6/petD BA6348_16640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA6348_16645 PF00033 Cytochrome b/b6/petB BA6348_16650 PF00355 Rieske [2Fe-2S] domain BA6348_16680 PF08281 Sigma-70, region 4 BA6348_16680 PF04542 Sigma-70 region 2 BA6348_16685 PF01979 Amidohydrolase family BA6348_16690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA6348_16695 PF01842 ACT domain BA6348_16695 PF02153 Prephenate dehydrogenase BA6348_16700 PF00155 Aminotransferase class I and II BA6348_16705 PF00290 Tryptophan synthase alpha chain BA6348_16710 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_16715 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BA6348_16720 PF00218 Indole-3-glycerol phosphate synthase BA6348_16725 PF00591 Glycosyl transferase family, a/b domain BA6348_16725 PF02885 Glycosyl transferase family, helical bundle domain BA6348_16735 PF07736 Chorismate mutase type I BA6348_16740 PF01761 3-dehydroquinate synthase BA6348_16745 PF01264 Chorismate synthase BA6348_16750 PF03705 CheR methyltransferase, all-alpha domain BA6348_16750 PF01739 CheR methyltransferase, SAM binding domain BA6348_16755 PF00334 Nucleoside diphosphate kinase BA6348_16760 PF00348 Polyprenyl synthetase BA6348_16775 PF01040 UbiA prenyltransferase family BA6348_16785 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BA6348_16795 PF02081 Tryptophan RNA-binding attenuator protein BA6348_16800 PF01464 Transglycosylase SLT domain BA6348_16810 PF01227 GTP cyclohydrolase I BA6348_16815 PF00216 Bacterial DNA-binding protein BA6348_16820 PF09547 Stage IV sporulation protein A (spore_IV_A) BA6348_16855 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BA6348_16855 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BA6348_16860 PF02660 Glycerol-3-phosphate acyltransferase BA6348_16865 PF01926 50S ribosome-binding GTPase BA6348_16865 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BA6348_16875 PF14045 YIEGIA protein BA6348_16885 PF01070 FMN-dependent dehydrogenase BA6348_16890 PF00575 S1 RNA binding domain BA6348_16900 PF02224 Cytidylate kinase BA6348_16915 PF14620 YpeB sporulation BA6348_16915 PF03413 Peptidase propeptide and YPEB domain BA6348_16920 PF07486 Cell Wall Hydrolase BA6348_16920 PF01471 Putative peptidoglycan binding domain BA6348_16925 PF13367 PrsW family intramembrane metalloprotease BA6348_16930 PF00710 Asparaginase, N-terminal BA6348_16930 PF17763 Glutaminase/Asparaginase C-terminal domain BA6348_16935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA6348_16935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA6348_16940 PF02585 GlcNAc-PI de-N-acetylase BA6348_16945 PF05389 Negative regulator of genetic competence (MecA) BA6348_16960 PF01476 LysM domain BA6348_16970 PF00270 DEAD/DEAH box helicase BA6348_16970 PF00271 Helicase conserved C-terminal domain BA6348_16990 PF00266 Aminotransferase class-V BA6348_16995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA6348_16995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA6348_16995 PF01842 ACT domain BA6348_17000 PF03600 Citrate transporter BA6348_17010 PF13419 Haloacid dehalogenase-like hydrolase BA6348_17015 PF00989 PAS fold BA6348_17015 PF00512 His Kinase A (phospho-acceptor) domain BA6348_17015 PF18698 Histidine kinase sensor domain BA6348_17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_17015 PF00672 HAMP domain BA6348_17020 PF00072 Response regulator receiver domain BA6348_17020 PF00486 Transcriptional regulatory protein, C terminal BA6348_17025 PF01578 Cytochrome C assembly protein BA6348_17030 PF05140 ResB-like family BA6348_17035 PF00578 AhpC/TSA family BA6348_17040 PF00849 RNA pseudouridylate synthase BA6348_17040 PF01479 S4 domain BA6348_17045 PF07670 Nucleoside recognition BA6348_17050 PF07670 Nucleoside recognition BA6348_17055 PF07943 Penicillin-binding protein 5, C-terminal domain BA6348_17055 PF00768 D-alanyl-D-alanine carboxypeptidase BA6348_17060 PF04079 Segregation and condensation complex subunit ScpB BA6348_17065 PF02616 Segregation and condensation protein ScpA BA6348_17070 PF02163 Peptidase family M50 BA6348_17075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA6348_17080 PF10442 FIST C domain BA6348_17080 PF08495 FIST N domain BA6348_17080 PF00990 Diguanylate cyclase, GGDEF domain BA6348_17080 PF00563 EAL domain BA6348_17085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA6348_17085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA6348_17090 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_17095 PF14097 Stage V sporulation protein AE1 BA6348_17100 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA6348_17105 PF07451 Stage V sporulation protein AD (SpoVAD) BA6348_17110 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BA6348_17115 PF13782 Stage V sporulation protein AB BA6348_17120 PF12164 Stage V sporulation protein AA BA6348_17125 PF04542 Sigma-70 region 2 BA6348_17125 PF04539 Sigma-70 region 3 BA6348_17125 PF04545 Sigma-70, region 4 BA6348_17130 PF13581 Histidine kinase-like ATPase domain BA6348_17135 PF01740 STAS domain BA6348_17140 PF07943 Penicillin-binding protein 5, C-terminal domain BA6348_17140 PF00768 D-alanyl-D-alanine carboxypeptidase BA6348_17145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_17145 PF02743 Cache domain BA6348_17145 PF00672 HAMP domain BA6348_17150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_17150 PF00005 ABC transporter BA6348_17155 PF00005 ABC transporter BA6348_17155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_17160 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_17160 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_17165 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_17170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_17180 PF00591 Glycosyl transferase family, a/b domain BA6348_17180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BA6348_17180 PF02885 Glycosyl transferase family, helical bundle domain BA6348_17185 PF01048 Phosphorylase superfamily BA6348_17190 PF01676 Metalloenzyme superfamily BA6348_17195 PF00589 Phage integrase family BA6348_17195 PF02899 Phage integrase, N-terminal SAM-like domain BA6348_17205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA6348_17205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA6348_17210 PF01475 Ferric uptake regulator family BA6348_17215 PF01944 Stage II sporulation protein M BA6348_17225 PF00293 NUDIX domain BA6348_17240 PF07687 Peptidase dimerisation domain BA6348_17240 PF01546 Peptidase family M20/M25/M40 BA6348_17255 PF02817 e3 binding domain BA6348_17255 PF00364 Biotin-requiring enzyme BA6348_17255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA6348_17260 PF02780 Transketolase, C-terminal domain BA6348_17260 PF02779 Transketolase, pyrimidine binding domain BA6348_17265 PF00676 Dehydrogenase E1 component BA6348_17270 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_17270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA6348_17275 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA6348_17275 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA6348_17280 PF00158 Sigma-54 interaction domain BA6348_17280 PF00989 PAS fold BA6348_17280 PF02954 Bacterial regulatory protein, Fis family BA6348_17295 PF00535 Glycosyl transferase family 2 BA6348_17325 PF08241 Methyltransferase domain BA6348_17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_17330 PF03466 LysR substrate binding domain BA6348_17335 PF00149 Calcineurin-like phosphoesterase BA6348_17335 PF10518 TAT (twin-arginine translocation) pathway signal sequence BA6348_17340 PF00484 Carbonic anhydrase BA6348_17350 PF00753 Metallo-beta-lactamase superfamily BA6348_17350 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA6348_17355 PF08769 Sporulation initiation factor Spo0A C terminal BA6348_17355 PF00072 Response regulator receiver domain BA6348_17360 PF05580 SpoIVB peptidase S55 BA6348_17360 PF17820 PDZ domain BA6348_17365 PF02463 RecF/RecN/SMC N terminal domain BA6348_17370 PF02863 Arginine repressor, C-terminal domain BA6348_17370 PF01316 Arginine repressor, DNA binding domain BA6348_17375 PF01513 ATP-NAD kinase BA6348_17380 PF01728 FtsJ-like methyltransferase BA6348_17380 PF01479 S4 domain BA6348_17385 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BA6348_17385 PF02780 Transketolase, C-terminal domain BA6348_17385 PF02779 Transketolase, pyrimidine binding domain BA6348_17395 PF00348 Polyprenyl synthetase BA6348_17405 PF13742 OB-fold nucleic acid binding domain BA6348_17405 PF02601 Exonuclease VII, large subunit BA6348_17410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BA6348_17410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BA6348_17415 PF00814 Glycoprotease family BA6348_17420 PF01029 NusB family BA6348_17435 PF03780 Asp23 family, cell envelope-related function BA6348_17440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA6348_17440 PF02785 Biotin carboxylase C-terminal domain BA6348_17440 PF00289 Biotin carboxylase, N-terminal domain BA6348_17445 PF00364 Biotin-requiring enzyme BA6348_17450 PF12685 SpoIIIAH-like protein BA6348_17460 PF09581 Stage III sporulation protein AF (Spore_III_AF) BA6348_17465 PF09546 Stage III sporulation protein AE (spore_III_AE) BA6348_17470 PF06686 Stage III sporulation protein AC/AD protein family BA6348_17480 PF09548 Stage III sporulation protein AB (spore_III_AB) BA6348_17495 PF10942 Protein of unknown function (DUF2619) BA6348_17500 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) BA6348_17505 PF04029 2-phosphosulpholactate phosphatase BA6348_17510 PF04284 Protein of unknown function (DUF441) BA6348_17515 PF08207 Elongation factor P (EF-P) KOW-like domain BA6348_17515 PF09285 Elongation factor P, C-terminal BA6348_17515 PF01132 Elongation factor P (EF-P) OB domain BA6348_17520 PF01321 Creatinase/Prolidase N-terminal domain BA6348_17520 PF00557 Metallopeptidase family M24 BA6348_17525 PF01220 Dehydroquinase class II BA6348_17535 PF07136 Protein of unknown function (DUF1385) BA6348_17545 PF01734 Patatin-like phospholipase BA6348_17550 PF02742 Iron dependent repressor, metal binding and dimerisation domain BA6348_17550 PF01325 Iron dependent repressor, N-terminal DNA binding domain BA6348_17555 PF03358 NADPH-dependent FMN reductase BA6348_17565 PF13426 PAS domain BA6348_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_17565 PF13188 PAS domain BA6348_17565 PF00512 His Kinase A (phospho-acceptor) domain BA6348_17565 PF00989 PAS fold BA6348_17575 PF04389 Peptidase family M28 BA6348_17575 PF02225 PA domain BA6348_17580 PF01063 Amino-transferase class IV BA6348_17585 PF03099 Biotin/lipoate A/B protein ligase family BA6348_17590 PF04101 Glycosyltransferase family 28 C-terminal domain BA6348_17590 PF03033 Glycosyltransferase family 28 N-terminal domain BA6348_17595 PF02347 Glycine cleavage system P-protein BA6348_17600 PF02347 Glycine cleavage system P-protein BA6348_17605 PF08669 Glycine cleavage T-protein C-terminal barrel domain BA6348_17605 PF01571 Aminomethyltransferase folate-binding domain BA6348_17610 PF00271 Helicase conserved C-terminal domain BA6348_17610 PF00176 SNF2 family N-terminal domain BA6348_17625 PF03698 Uncharacterised protein family (UPF0180) BA6348_17630 PF14038 YqzE-like protein BA6348_17635 PF01202 Shikimate kinase BA6348_17650 PF12727 PBP superfamily domain BA6348_17650 PF12728 Helix-turn-helix domain BA6348_17660 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_17665 PF03459 TOBE domain BA6348_17665 PF00005 ABC transporter BA6348_17670 PF03746 LamB/YcsF family BA6348_17675 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BA6348_17685 PF06133 Control of competence regulator ComK, YlbF/YmcA BA6348_17710 PF00753 Metallo-beta-lactamase superfamily BA6348_17710 PF17770 Ribonuclease J C-terminal domain BA6348_17710 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BA6348_17715 PF05067 Manganese containing catalase BA6348_17720 PF12652 CotJB protein BA6348_17725 PF11007 Spore coat associated protein JA (CotJA) BA6348_17730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA6348_17730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA6348_17735 PF01116 Fructose-bisphosphate aldolase class-II BA6348_17745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BA6348_17745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BA6348_17750 PF03611 PTS system sugar-specific permease component BA6348_17770 PF00072 Response regulator receiver domain BA6348_17770 PF04397 LytTr DNA-binding domain BA6348_17775 PF00565 Staphylococcal nuclease homologue BA6348_17790 PF13411 MerR HTH family regulatory protein BA6348_17795 PF00571 CBS domain BA6348_17800 PF08868 YugN-like family BA6348_17805 PF01098 Cell cycle protein BA6348_17815 PF00205 Thiamine pyrophosphate enzyme, central domain BA6348_17815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA6348_17815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA6348_17820 PF01471 Putative peptidoglycan binding domain BA6348_17820 PF07486 Cell Wall Hydrolase BA6348_17830 PF01699 Sodium/calcium exchanger protein BA6348_17835 PF00209 Sodium:neurotransmitter symporter family BA6348_17840 PF07408 Protein of unknown function (DUF1507) BA6348_17845 PF04960 Glutaminase BA6348_17850 PF00155 Aminotransferase class I and II BA6348_17855 PF03806 AbgT putative transporter family BA6348_17870 PF00202 Aminotransferase class-III BA6348_17875 PF13426 PAS domain BA6348_17875 PF00158 Sigma-54 interaction domain BA6348_17875 PF02954 Bacterial regulatory protein, Fis family BA6348_17880 PF00324 Amino acid permease BA6348_17885 PF07690 Major Facilitator Superfamily BA6348_17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_17890 PF03466 LysR substrate binding domain BA6348_17895 PF01569 PAP2 superfamily BA6348_17900 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BA6348_17910 PF00082 Subtilase family BA6348_17930 PF12706 Beta-lactamase superfamily domain BA6348_17940 PF00005 ABC transporter BA6348_17945 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_17965 PF11084 Protein of unknown function (DUF2621) BA6348_17980 PF00581 Rhodanese-like domain BA6348_17985 PF05675 Protein of unknown function (DUF817) BA6348_17990 PF12833 Helix-turn-helix domain BA6348_17990 PF01497 Periplasmic binding protein BA6348_17995 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_17995 PF00107 Zinc-binding dehydrogenase BA6348_18000 PF01022 Bacterial regulatory protein, arsR family BA6348_18025 PF01609 Transposase DDE domain BA6348_18040 PF16658 Class II release factor RF3, C-terminal domain BA6348_18040 PF03144 Elongation factor Tu domain 2 BA6348_18040 PF00009 Elongation factor Tu GTP binding domain BA6348_18045 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BA6348_18060 PF02219 Methylenetetrahydrofolate reductase BA6348_18060 PF02574 Homocysteine S-methyltransferase BA6348_18065 PF00809 Pterin binding enzyme BA6348_18065 PF02965 Vitamin B12 dependent methionine synthase, activation domain BA6348_18065 PF02607 B12 binding domain BA6348_18065 PF02310 B12 binding domain BA6348_18065 PF02574 Homocysteine S-methyltransferase BA6348_18090 PF05746 DALR anticodon binding domain BA6348_18090 PF00750 tRNA synthetases class I (R) BA6348_18090 PF03485 Arginyl tRNA synthetase N terminal domain BA6348_18095 PF05139 Erythromycin esterase BA6348_18100 PF02803 Thiolase, C-terminal domain BA6348_18100 PF00108 Thiolase, N-terminal domain BA6348_18105 PF00005 ABC transporter BA6348_18110 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_18115 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_18120 PF01144 Coenzyme A transferase BA6348_18125 PF01144 Coenzyme A transferase BA6348_18130 PF00158 Sigma-54 interaction domain BA6348_18140 PF01261 Xylose isomerase-like TIM barrel BA6348_18145 PF00440 Bacterial regulatory proteins, tetR family BA6348_18145 PF08361 MAATS-type transcriptional repressor, C-terminal region BA6348_18160 PF00072 Response regulator receiver domain BA6348_18165 PF01966 HD domain BA6348_18170 PF03454 MoeA C-terminal region (domain IV) BA6348_18170 PF00994 Probable molybdopterin binding domain BA6348_18170 PF03453 MoeA N-terminal region (domain I and II) BA6348_18175 PF04055 Radical SAM superfamily BA6348_18175 PF06463 Molybdenum Cofactor Synthesis C BA6348_18180 PF02634 FdhD/NarQ family BA6348_18185 PF10057 Uncharacterized conserved protein (DUF2294) BA6348_18195 PF07849 Protein of unknown function (DUF1641) BA6348_18200 PF00384 Molybdopterin oxidoreductase BA6348_18200 PF01568 Molydopterin dinucleotide binding domain BA6348_18200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA6348_18200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA6348_18200 PF00037 4Fe-4S binding domain BA6348_18205 PF02322 Cytochrome bd terminal oxidase subunit II BA6348_18210 PF01654 Cytochrome bd terminal oxidase subunit I BA6348_18240 PF00474 Sodium:solute symporter family BA6348_18245 PF00474 Sodium:solute symporter family BA6348_18250 PF04341 Protein of unknown function, DUF485 BA6348_18255 PF00072 Response regulator receiver domain BA6348_18255 PF04397 LytTr DNA-binding domain BA6348_18260 PF06580 Histidine kinase BA6348_18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_18260 PF07694 5TMR of 5TMR-LYT BA6348_18265 PF13537 Glutamine amidotransferase domain BA6348_18265 PF00733 Asparagine synthase BA6348_18275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA6348_18275 PF01568 Molydopterin dinucleotide binding domain BA6348_18275 PF00384 Molybdopterin oxidoreductase BA6348_18290 PF00132 Bacterial transferase hexapeptide (six repeats) BA6348_18295 PF00583 Acetyltransferase (GNAT) family BA6348_18305 PF08756 YfkB-like domain BA6348_18305 PF04055 Radical SAM superfamily BA6348_18315 PF07690 Major Facilitator Superfamily BA6348_18325 PF05257 CHAP domain BA6348_18325 PF01476 LysM domain BA6348_18335 PF07804 HipA-like C-terminal domain BA6348_18340 PF05681 Fumarate hydratase (Fumerase) BA6348_18340 PF05683 Fumarase C-terminus BA6348_18355 PF05698 Bacterial trigger factor protein (TF) C-terminus BA6348_18365 PF00005 ABC transporter BA6348_18380 PF07687 Peptidase dimerisation domain BA6348_18380 PF01546 Peptidase family M20/M25/M40 BA6348_18390 PF03851 UV-endonuclease UvdE BA6348_18400 PF00221 Aromatic amino acid lyase BA6348_18405 PF04134 Protein of unknown function, DUF393 BA6348_18410 PF00248 Aldo/keto reductase family BA6348_18430 PF01329 Pterin 4 alpha carbinolamine dehydratase BA6348_18435 PF13649 Methyltransferase domain BA6348_18440 PF01712 Deoxynucleoside kinase BA6348_18445 PF01712 Deoxynucleoside kinase BA6348_18460 PF08281 Sigma-70, region 4 BA6348_18460 PF04542 Sigma-70 region 2 BA6348_18470 PF08543 Phosphomethylpyrimidine kinase BA6348_18475 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BA6348_18475 PF07730 Histidine kinase BA6348_18475 PF00672 HAMP domain BA6348_18475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_18480 PF00072 Response regulator receiver domain BA6348_18480 PF00196 Bacterial regulatory proteins, luxR family BA6348_18500 PF03773 Predicted permease BA6348_18505 PF01022 Bacterial regulatory protein, arsR family BA6348_18515 PF16916 Dimerisation domain of Zinc Transporter BA6348_18515 PF01545 Cation efflux family BA6348_18520 PF00501 AMP-binding enzyme BA6348_18520 PF13193 AMP-binding enzyme C-terminal domain BA6348_18525 PF00149 Calcineurin-like phosphoesterase BA6348_18530 PF13556 PucR C-terminal helix-turn-helix domain BA6348_18530 PF05651 Putative sugar diacid recognition BA6348_18530 PF17853 GGDEF-like domain BA6348_18535 PF17912 MalK OB fold domain BA6348_18535 PF00005 ABC transporter BA6348_18535 PF03459 TOBE domain BA6348_18545 PF03458 UPF0126 domain BA6348_18550 PF00082 Subtilase family BA6348_18555 PF02525 Flavodoxin-like fold BA6348_18570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA6348_18575 PF17932 Tetracyclin repressor-like, C-terminal domain BA6348_18575 PF00440 Bacterial regulatory proteins, tetR family BA6348_18590 PF07833 Copper amine oxidase N-terminal domain BA6348_18595 PF07075 Protein of unknown function (DUF1343) BA6348_18600 PF13193 AMP-binding enzyme C-terminal domain BA6348_18600 PF00501 AMP-binding enzyme BA6348_18610 PF00171 Aldehyde dehydrogenase family BA6348_18615 PF07687 Peptidase dimerisation domain BA6348_18615 PF01546 Peptidase family M20/M25/M40 BA6348_18620 PF01144 Coenzyme A transferase BA6348_18625 PF01144 Coenzyme A transferase BA6348_18630 PF00202 Aminotransferase class-III BA6348_18640 PF00583 Acetyltransferase (GNAT) family BA6348_18645 PF03009 Glycerophosphoryl diester phosphodiesterase family BA6348_18650 PF16199 Radical_SAM C-terminal domain BA6348_18650 PF04055 Radical SAM superfamily BA6348_18715 PF03372 Endonuclease/Exonuclease/phosphatase family BA6348_18725 PF01471 Putative peptidoglycan binding domain BA6348_18725 PF03572 Peptidase family S41 BA6348_18725 PF17820 PDZ domain BA6348_18735 PF01784 NIF3 (NGG1p interacting factor 3) BA6348_18740 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BA6348_18745 PF02770 Acyl-CoA dehydrogenase, middle domain BA6348_18745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA6348_18745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA6348_18755 PF00140 Sigma-70 factor, region 1.2 BA6348_18755 PF04542 Sigma-70 region 2 BA6348_18755 PF03979 Sigma-70 factor, region 1.1 BA6348_18755 PF04545 Sigma-70, region 4 BA6348_18755 PF04539 Sigma-70 region 3 BA6348_18760 PF08275 DNA primase catalytic core, N-terminal domain BA6348_18760 PF10410 DnaB-helicase binding domain of primase BA6348_18760 PF01807 CHC2 zinc finger BA6348_18765 PF03618 Kinase/pyrophosphorylase BA6348_18770 PF00571 CBS domain BA6348_18770 PF08279 HTH domain BA6348_18775 PF05746 DALR anticodon binding domain BA6348_18775 PF02092 Glycyl-tRNA synthetase beta subunit BA6348_18780 PF02091 Glycyl-tRNA synthetase alpha subunit BA6348_18785 PF02565 Recombination protein O C terminal BA6348_18785 PF11967 Recombination protein O N terminal BA6348_18795 PF07650 KH domain BA6348_18795 PF01926 50S ribosome-binding GTPase BA6348_18800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA6348_18810 PF02130 Uncharacterized protein family UPF0054 BA6348_18815 PF02562 PhoH-like protein BA6348_18820 PF06898 Putative stage IV sporulation protein YqfD BA6348_18825 PF07873 YabP family BA6348_18840 PF12127 SigmaW regulon antibacterial BA6348_18845 PF01957 NfeD-like C-terminal, partner-binding BA6348_18845 PF01972 Serine dehydrogenase proteinase BA6348_18850 PF09424 Yqey-like protein BA6348_18855 PF01165 Ribosomal protein S21 BA6348_18860 PF01230 HIT domain BA6348_18865 PF01225 Mur ligase family, catalytic domain BA6348_18865 PF02875 Mur ligase family, glutamate ligase domain BA6348_18865 PF08245 Mur ligase middle domain BA6348_18870 PF07478 D-ala D-ala ligase C-terminus BA6348_18870 PF01820 D-ala D-ala ligase N-terminus BA6348_18880 PF10672 S-adenosylmethionine-dependent methyltransferase BA6348_18880 PF17785 PUA-like domain BA6348_18885 PF02690 Na+/Pi-cotransporter BA6348_18890 PF04172 LrgB-like family BA6348_18895 PF03788 LrgA family BA6348_18900 PF01791 DeoC/LacD family aldolase BA6348_18905 PF00293 NUDIX domain BA6348_18910 PF01938 TRAM domain BA6348_18910 PF00919 Uncharacterized protein family UPF0004 BA6348_18910 PF04055 Radical SAM superfamily BA6348_18915 PF04452 RNA methyltransferase BA6348_18925 PF00684 DnaJ central domain BA6348_18925 PF00226 DnaJ domain BA6348_18925 PF01556 DnaJ C terminal domain BA6348_18930 PF00012 Hsp70 protein BA6348_18935 PF01025 GrpE BA6348_18940 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BA6348_18940 PF01628 HrcA protein C terminal domain BA6348_18945 PF04055 Radical SAM superfamily BA6348_18945 PF06969 HemN C-terminal domain BA6348_18950 PF03144 Elongation factor Tu domain 2 BA6348_18950 PF00009 Elongation factor Tu GTP binding domain BA6348_18950 PF06421 GTP-binding protein LepA C-terminus BA6348_18950 PF00679 Elongation factor G C-terminus BA6348_18955 PF01230 HIT domain BA6348_18960 PF00583 Acetyltransferase (GNAT) family BA6348_18970 PF04542 Sigma-70 region 2 BA6348_18970 PF08281 Sigma-70, region 4 BA6348_18975 PF13649 Methyltransferase domain BA6348_18980 PF00005 ABC transporter BA6348_18985 PF01032 FecCD transport family BA6348_18990 PF01497 Periplasmic binding protein BA6348_18995 PF01321 Creatinase/Prolidase N-terminal domain BA6348_18995 PF00557 Metallopeptidase family M24 BA6348_19000 PF00561 alpha/beta hydrolase fold BA6348_19015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_19020 PF00005 ABC transporter BA6348_19020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_19025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_19025 PF00005 ABC transporter BA6348_19035 PF07454 Stage II sporulation protein P (SpoIIP) BA6348_19040 PF03418 Germination protease BA6348_19045 PF01649 Ribosomal protein S20 BA6348_19050 PF06144 DNA polymerase III, delta subunit BA6348_19065 PF03772 Competence protein BA6348_19065 PF00753 Metallo-beta-lactamase superfamily BA6348_19065 PF13567 Domain of unknown function (DUF4131) BA6348_19070 PF13537 Glutamine amidotransferase domain BA6348_19070 PF00733 Asparagine synthase BA6348_19075 PF10531 SLBB domain BA6348_19080 PF03807 NADP oxidoreductase coenzyme F420-dependent BA6348_19080 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA6348_19085 PF09334 tRNA synthetases class I (M) BA6348_19085 PF13603 Leucyl-tRNA synthetase, Domain 2 BA6348_19085 PF00133 tRNA synthetases class I (I, L, M and V) BA6348_19085 PF08264 Anticodon-binding domain of tRNA BA6348_19090 PF13649 Methyltransferase domain BA6348_19100 PF01966 HD domain BA6348_19105 PF01467 Cytidylyltransferase-like BA6348_19110 PF01985 CRS1 / YhbY (CRM) domain BA6348_19115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BA6348_19115 PF01488 Shikimate / quinate 5-dehydrogenase BA6348_19115 PF08501 Shikimate dehydrogenase substrate binding domain BA6348_19120 PF01926 50S ribosome-binding GTPase BA6348_19130 PF00440 Bacterial regulatory proteins, tetR family BA6348_19135 PF07690 Major Facilitator Superfamily BA6348_19145 PF11798 IMS family HHH motif BA6348_19145 PF00817 impB/mucB/samB family BA6348_19145 PF11799 impB/mucB/samB family C-terminal domain BA6348_19150 PF00578 AhpC/TSA family BA6348_19150 PF10417 C-terminal domain of 1-Cys peroxiredoxin BA6348_19155 PF07722 Peptidase C26 BA6348_19160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_19170 PF01593 Flavin containing amine oxidoreductase BA6348_19180 PF08712 Scaffold protein Nfu/NifU N terminal BA6348_19180 PF13769 Virulence factor BA6348_19190 PF01609 Transposase DDE domain BA6348_19205 PF03734 L,D-transpeptidase catalytic domain BA6348_19205 PF01476 LysM domain BA6348_19215 PF00005 ABC transporter BA6348_19215 PF12848 ABC transporter BA6348_19215 PF16326 ABC transporter C-terminal domain BA6348_19220 PF02146 Sir2 family BA6348_19235 PF02600 Disulfide bond formation protein DsbB BA6348_19240 PF00085 Thioredoxin BA6348_19245 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BA6348_19250 PF02630 SCO1/SenC BA6348_19275 PF08245 Mur ligase middle domain BA6348_19275 PF02875 Mur ligase family, glutamate ligase domain BA6348_19275 PF01225 Mur ligase family, catalytic domain BA6348_19280 PF09587 Bacterial capsule synthesis protein PGA_cap BA6348_19290 PF02559 CarD-like/TRCF domain BA6348_19315 PF01610 Transposase BA6348_19315 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_19315 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_19325 PF04542 Sigma-70 region 2 BA6348_19325 PF04545 Sigma-70, region 4 BA6348_19330 PF00072 Response regulator receiver domain BA6348_19355 PF01966 HD domain BA6348_19360 PF02899 Phage integrase, N-terminal SAM-like domain BA6348_19360 PF00589 Phage integrase family BA6348_19390 PF01966 HD domain BA6348_19400 PF00905 Penicillin binding protein transpeptidase domain BA6348_19400 PF03717 Penicillin-binding Protein dimerisation domain BA6348_19405 PF00485 Phosphoribulokinase / Uridine kinase family BA6348_19415 PF02618 YceG-like family BA6348_19430 PF00465 Iron-containing alcohol dehydrogenase BA6348_19435 PF00171 Aldehyde dehydrogenase family BA6348_19440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA6348_19440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA6348_19445 PF02954 Bacterial regulatory protein, Fis family BA6348_19445 PF13426 PAS domain BA6348_19445 PF00158 Sigma-54 interaction domain BA6348_19450 PF06949 Protein of unknown function (DUF1292) BA6348_19455 PF03652 Holliday junction resolvase BA6348_19460 PF06135 IreB regulatory phosphoprotein BA6348_19465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA6348_19465 PF01411 tRNA synthetases class II (A) BA6348_19465 PF02272 DHHA1 domain BA6348_19475 PF01594 AI-2E family transporter BA6348_19480 PF03741 Integral membrane protein TerC family BA6348_19500 PF13538 UvrD-like helicase C-terminal domain BA6348_19500 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BA6348_19500 PF14490 Helix-hairpin-helix containing domain BA6348_19505 PF00672 HAMP domain BA6348_19505 PF02743 Cache domain BA6348_19505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_19515 PF00266 Aminotransferase class-V BA6348_19520 PF02082 Transcriptional regulator BA6348_19525 PF12002 MgsA AAA+ ATPase C terminal BA6348_19525 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_19525 PF16193 AAA C-terminal domain BA6348_19530 PF00899 ThiF family BA6348_19540 PF01336 OB-fold nucleic acid binding domain BA6348_19540 PF00152 tRNA synthetases class II (D, K and N) BA6348_19540 PF02938 GAD domain BA6348_19545 PF13393 Histidyl-tRNA synthetase BA6348_19545 PF03129 Anticodon binding domain BA6348_19550 PF04055 Radical SAM superfamily BA6348_19555 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_19565 PF02580 D-Tyr-tRNA(Tyr) deacylase BA6348_19570 PF02824 TGS domain BA6348_19570 PF13291 ACT domain BA6348_19570 PF04607 Region found in RelA / SpoT proteins BA6348_19575 PF00156 Phosphoribosyl transferase domain BA6348_19580 PF01368 DHH family BA6348_19580 PF17768 RecJ OB domain BA6348_19580 PF02272 DHHA1 domain BA6348_19580 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BA6348_19585 PF01545 Cation efflux family BA6348_19585 PF16916 Dimerisation domain of Zinc Transporter BA6348_19590 PF07549 SecD/SecF GG Motif BA6348_19590 PF02355 Protein export membrane protein BA6348_19595 PF02355 Protein export membrane protein BA6348_19595 PF07549 SecD/SecF GG Motif BA6348_19605 PF01943 Polysaccharide biosynthesis protein BA6348_19605 PF14667 Polysaccharide biosynthesis C-terminal domain BA6348_19610 PF04239 Protein of unknown function (DUF421) BA6348_19615 PF01544 CorA-like Mg2+ transporter protein BA6348_19625 PF02699 Preprotein translocase subunit BA6348_19630 PF01702 Queuine tRNA-ribosyltransferase BA6348_19635 PF02547 Queuosine biosynthesis protein BA6348_19640 PF08486 Stage II sporulation protein BA6348_19640 PF04122 Putative cell wall binding repeat 2 BA6348_19645 PF11146 Protein of unknown function (DUF2905) BA6348_19650 PF17864 RuvB AAA lid domain BA6348_19650 PF05491 RuvB C-terminal winged helix domain BA6348_19650 PF05496 Holliday junction DNA helicase RuvB P-loop domain BA6348_19655 PF01330 RuvA N terminal domain BA6348_19655 PF07499 RuvA, C-terminal domain BA6348_19660 PF02075 Crossover junction endodeoxyribonuclease RuvC BA6348_19680 PF00149 Calcineurin-like phosphoesterase BA6348_19680 PF02872 5'-nucleotidase, C-terminal domain BA6348_19690 PF01476 LysM domain BA6348_19695 PF01842 ACT domain BA6348_19695 PF00800 Prephenate dehydratase BA6348_19700 PF08544 GHMP kinases C terminal BA6348_19700 PF00288 GHMP kinases N terminal domain BA6348_19705 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_19710 PF00742 Homoserine dehydrogenase BA6348_19710 PF03447 Homoserine dehydrogenase, NAD binding domain BA6348_19710 PF01842 ACT domain BA6348_19715 PF01842 ACT domain BA6348_19720 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_19725 PF07849 Protein of unknown function (DUF1641) BA6348_19735 PF01926 50S ribosome-binding GTPase BA6348_19735 PF09269 Domain of unknown function (DUF1967) BA6348_19735 PF01018 GTP1/OBG BA6348_19745 PF01016 Ribosomal L27 protein BA6348_19755 PF00829 Ribosomal prokaryotic L21 protein BA6348_19760 PF10150 Ribonuclease E/G family BA6348_19760 PF00575 S1 RNA binding domain BA6348_19765 PF02163 Peptidase family M50 BA6348_19775 PF00313 'Cold-shock' DNA-binding domain BA6348_19780 PF01098 Cell cycle protein BA6348_19785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA6348_19800 PF04093 rod shape-determining protein MreD BA6348_19805 PF04085 rod shape-determining protein MreC BA6348_19815 PF04002 RadC-like JAB domain BA6348_19820 PF02545 Maf-like protein BA6348_19835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA6348_19835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA6348_19840 PF02875 Mur ligase family, glutamate ligase domain BA6348_19840 PF08245 Mur ligase middle domain BA6348_19840 PF01225 Mur ligase family, catalytic domain BA6348_19845 PF08245 Mur ligase middle domain BA6348_19845 PF02875 Mur ligase family, glutamate ligase domain BA6348_19850 PF08264 Anticodon-binding domain of tRNA BA6348_19850 PF00133 tRNA synthetases class I (I, L, M and V) BA6348_19850 PF10458 Valyl tRNA synthetase tRNA binding arm BA6348_19885 PF01476 LysM domain BA6348_19900 PF01208 Uroporphyrinogen decarboxylase (URO-D) BA6348_19915 PF03551 Transcriptional regulator PadR-like family BA6348_19920 PF02872 5'-nucleotidase, C-terminal domain BA6348_19920 PF00149 Calcineurin-like phosphoesterase BA6348_19925 PF00561 alpha/beta hydrolase fold BA6348_19940 PF00202 Aminotransferase class-III BA6348_19945 PF00490 Delta-aminolevulinic acid dehydratase BA6348_19955 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BA6348_19955 PF03900 Porphobilinogen deaminase, C-terminal domain BA6348_19960 PF01578 Cytochrome C assembly protein BA6348_19965 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BA6348_19965 PF01488 Shikimate / quinate 5-dehydrogenase BA6348_19965 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BA6348_19975 PF00963 Cohesin domain BA6348_19975 PF02838 Glycosyl hydrolase family 20, domain 2 BA6348_19975 PF07555 beta-N-acetylglucosaminidase BA6348_19975 PF00754 F5/8 type C domain BA6348_19975 PF00041 Fibronectin type III domain BA6348_19980 PF01926 50S ribosome-binding GTPase BA6348_19985 PF02190 ATP-dependent protease La (LON) substrate-binding domain BA6348_19985 PF05362 Lon protease (S16) C-terminal proteolytic domain BA6348_19985 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_19990 PF00004 ATPase family associated with various cellular activities (AAA) BA6348_19990 PF05362 Lon protease (S16) C-terminal proteolytic domain BA6348_19995 PF10431 C-terminal, D2-small domain, of ClpB protein BA6348_19995 PF06689 ClpX C4-type zinc finger BA6348_19995 PF07724 AAA domain (Cdc48 subfamily) BA6348_20005 PF05698 Bacterial trigger factor protein (TF) C-terminus BA6348_20005 PF05697 Bacterial trigger factor protein (TF) BA6348_20005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA6348_20010 PF12850 Calcineurin-like phosphoesterase superfamily domain BA6348_20015 PF01725 Ham1 family BA6348_20020 PF03725 3' exoribonuclease family, domain 2 BA6348_20020 PF01138 3' exoribonuclease family, domain 1 BA6348_20030 PF01177 Asp/Glu/Hydantoin racemase BA6348_20035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA6348_20035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA6348_20040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA6348_20095 PF01609 Transposase DDE domain BA6348_20105 PF13333 Integrase core domain BA6348_20105 PF00665 Integrase core domain BA6348_20105 PF13276 HTH-like domain BA6348_20145 PF03527 RHS protein BA6348_20155 PF05922 Peptidase inhibitor I9 BA6348_20155 PF00082 Subtilase family BA6348_20180 PF01609 Transposase DDE domain BA6348_20200 PF02567 Phenazine biosynthesis-like protein BA6348_20205 PF03466 LysR substrate binding domain BA6348_20205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_20220 PF04542 Sigma-70 region 2 BA6348_20220 PF04545 Sigma-70, region 4 BA6348_20235 PF00005 ABC transporter BA6348_20235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_20240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_20240 PF00005 ABC transporter BA6348_20245 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_20245 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_20250 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_20255 PF01546 Peptidase family M20/M25/M40 BA6348_20260 PF00989 PAS fold BA6348_20260 PF00158 Sigma-54 interaction domain BA6348_20260 PF02954 Bacterial regulatory protein, Fis family BA6348_20265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_20275 PF16363 GDP-mannose 4,6 dehydratase BA6348_20280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA6348_20280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA6348_20280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA6348_20280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA6348_20290 PF08757 CotH kinase protein BA6348_20295 PF05547 Immune inhibitor A peptidase M6 BA6348_20305 PF07687 Peptidase dimerisation domain BA6348_20305 PF01546 Peptidase family M20/M25/M40 BA6348_20310 PF01494 FAD binding domain BA6348_20315 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_20335 PF00480 ROK family BA6348_20345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_20345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_20350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_20350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_20355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_20355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_20360 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_20375 PF00480 ROK family BA6348_20375 PF01047 MarR family BA6348_20395 PF00196 Bacterial regulatory proteins, luxR family BA6348_20400 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_20400 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_20420 PF00746 LPXTG cell wall anchor motif BA6348_20420 PF00082 Subtilase family BA6348_20420 PF06280 Fn3-like domain BA6348_20420 PF02225 PA domain BA6348_20425 PF01047 MarR family BA6348_20430 PF13183 4Fe-4S dicluster domain BA6348_20430 PF13085 2Fe-2S iron-sulfur cluster binding domain BA6348_20435 PF00890 FAD binding domain BA6348_20435 PF02910 Fumarate reductase flavoprotein C-term BA6348_20440 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BA6348_20445 PF10702 Protein of unknown function (DUF2507) BA6348_20450 PF13840 ACT domain BA6348_20450 PF00696 Amino acid kinase family BA6348_20455 PF01541 GIY-YIG catalytic domain BA6348_20455 PF02151 UvrB/uvrC motif BA6348_20455 PF08459 UvrC Helix-hairpin-helix N-terminal BA6348_20465 PF00005 ABC transporter BA6348_20470 PF00005 ABC transporter BA6348_20470 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA6348_20475 PF02653 Branched-chain amino acid transport system / permease component BA6348_20475 PF11862 Domain of unknown function (DUF3382) BA6348_20480 PF02653 Branched-chain amino acid transport system / permease component BA6348_20485 PF13458 Periplasmic binding protein BA6348_20490 PF00085 Thioredoxin BA6348_20500 PF01012 Electron transfer flavoprotein domain BA6348_20500 PF00766 Electron transfer flavoprotein FAD-binding domain BA6348_20505 PF01012 Electron transfer flavoprotein domain BA6348_20510 PF00378 Enoyl-CoA hydratase/isomerase BA6348_20515 PF08359 YsiA-like protein, C-terminal region BA6348_20515 PF00440 Bacterial regulatory proteins, tetR family BA6348_20520 PF00501 AMP-binding enzyme BA6348_20520 PF13193 AMP-binding enzyme C-terminal domain BA6348_20525 PF03816 Cell envelope-related transcriptional attenuator domain BA6348_20530 PF02803 Thiolase, C-terminal domain BA6348_20530 PF00108 Thiolase, N-terminal domain BA6348_20550 PF14667 Polysaccharide biosynthesis C-terminal domain BA6348_20550 PF01943 Polysaccharide biosynthesis protein BA6348_20560 PF03023 Lipid II flippase MurJ BA6348_20590 PF00534 Glycosyl transferases group 1 BA6348_20590 PF13439 Glycosyltransferase Family 4 BA6348_20595 PF04951 D-aminopeptidase BA6348_20605 PF00313 'Cold-shock' DNA-binding domain BA6348_20610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA6348_20610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA6348_20610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA6348_20625 PF03994 Domain of Unknown Function (DUF350) BA6348_20630 PF00488 MutS domain V BA6348_20630 PF01713 Smr domain BA6348_20640 PF00731 AIR carboxylase BA6348_20645 PF02540 NAD synthase BA6348_20650 PF05164 Cell division protein ZapA BA6348_20655 PF03147 Ferredoxin-fold anticodon binding domain BA6348_20655 PF01588 Putative tRNA binding domain BA6348_20655 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BA6348_20655 PF03484 tRNA synthetase B5 domain BA6348_20655 PF03483 B3/4 domain BA6348_20660 PF01409 tRNA synthetases class II core domain (F) BA6348_20660 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BA6348_20670 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_20670 PF00107 Zinc-binding dehydrogenase BA6348_20675 PF03358 NADPH-dependent FMN reductase BA6348_20680 PF03466 LysR substrate binding domain BA6348_20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_20685 PF00588 SpoU rRNA Methylase family BA6348_20685 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA6348_20690 PF02254 TrkA-N domain BA6348_20690 PF02080 TrkA-C domain BA6348_20695 PF14098 Small, acid-soluble spore protein I BA6348_20700 PF03845 Spore germination protein BA6348_20705 PF05504 Spore germination B3/ GerAC like, C-terminal BA6348_20710 PF03845 Spore germination protein BA6348_20715 PF03323 Bacillus/Clostridium GerA spore germination protein BA6348_20730 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_20730 PF01610 Transposase BA6348_20730 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_20740 PF02796 Helix-turn-helix domain of resolvase BA6348_20740 PF00665 Integrase core domain BA6348_20765 PF00266 Aminotransferase class-V BA6348_20770 PF01361 Tautomerase enzyme BA6348_20785 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA6348_20785 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BA6348_20795 PF09339 IclR helix-turn-helix domain BA6348_20795 PF01614 Bacterial transcriptional regulator BA6348_20800 PF06961 Protein of unknown function (DUF1294) BA6348_20805 PF09335 SNARE associated Golgi protein BA6348_20820 PF00994 Probable molybdopterin binding domain BA6348_20825 PF00392 Bacterial regulatory proteins, gntR family BA6348_20825 PF00155 Aminotransferase class I and II BA6348_20830 PF00180 Isocitrate/isopropylmalate dehydrogenase BA6348_20835 PF00682 HMGL-like BA6348_20835 PF08502 LeuA allosteric (dimerisation) domain BA6348_20840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BA6348_20840 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BA6348_20845 PF10369 Small subunit of acetolactate synthase BA6348_20845 PF01842 ACT domain BA6348_20850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA6348_20850 PF00205 Thiamine pyrophosphate enzyme, central domain BA6348_20850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA6348_20855 PF01747 ATP-sulfurylase BA6348_20855 PF14306 PUA-like domain BA6348_20860 PF01507 Phosphoadenosine phosphosulfate reductase family BA6348_20870 PF00453 Ribosomal protein L20 BA6348_20875 PF01632 Ribosomal protein L35 BA6348_20880 PF05198 Translation initiation factor IF-3, N-terminal domain BA6348_20880 PF00707 Translation initiation factor IF-3, C-terminal domain BA6348_20885 PF04055 Radical SAM superfamily BA6348_20885 PF06463 Molybdenum Cofactor Synthesis C BA6348_20890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_20895 PF03129 Anticodon binding domain BA6348_20895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA6348_20895 PF02824 TGS domain BA6348_20895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA6348_20905 PF04055 Radical SAM superfamily BA6348_20920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA6348_20920 PF18158 Adaptive response protein AidB N-terminal domain BA6348_20920 PF02770 Acyl-CoA dehydrogenase, middle domain BA6348_20925 PF00501 AMP-binding enzyme BA6348_20925 PF13193 AMP-binding enzyme C-terminal domain BA6348_20930 PF09278 MerR, DNA binding BA6348_20930 PF00376 MerR family regulatory protein BA6348_20935 PF07486 Cell Wall Hydrolase BA6348_20940 PF09671 Spore coat protein (Spore_GerQ) BA6348_20965 PF01609 Transposase DDE domain BA6348_20975 PF01063 Amino-transferase class IV BA6348_20980 PF00155 Aminotransferase class I and II BA6348_20985 PF00155 Aminotransferase class I and II BA6348_20990 PF00392 Bacterial regulatory proteins, gntR family BA6348_20990 PF00155 Aminotransferase class I and II BA6348_21020 PF00144 Beta-lactamase BA6348_21025 PF03576 Peptidase family S58 BA6348_21030 PF01244 Membrane dipeptidase (Peptidase family M19) BA6348_21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_21035 PF03466 LysR substrate binding domain BA6348_21040 PF07690 Major Facilitator Superfamily BA6348_21045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_21045 PF03466 LysR substrate binding domain BA6348_21055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_21055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_21060 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BA6348_21065 PF01022 Bacterial regulatory protein, arsR family BA6348_21070 PF06908 YspA SLOG family BA6348_21075 PF07690 Major Facilitator Superfamily BA6348_21095 PF00583 Acetyltransferase (GNAT) family BA6348_21100 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_21100 PF00107 Zinc-binding dehydrogenase BA6348_21120 PF00375 Sodium:dicarboxylate symporter family BA6348_21125 PF01594 AI-2E family transporter BA6348_21130 PF00266 Aminotransferase class-V BA6348_21135 PF00083 Sugar (and other) transporter BA6348_21140 PF16868 NMT1-like family BA6348_21145 PF02954 Bacterial regulatory protein, Fis family BA6348_21145 PF00072 Response regulator receiver domain BA6348_21145 PF00158 Sigma-54 interaction domain BA6348_21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_21150 PF00512 His Kinase A (phospho-acceptor) domain BA6348_21150 PF00989 PAS fold BA6348_21180 PF00356 Bacterial regulatory proteins, lacI family BA6348_21190 PF01741 Large-conductance mechanosensitive channel, MscL BA6348_21195 PF01156 Inosine-uridine preferring nucleoside hydrolase BA6348_21200 PF01156 Inosine-uridine preferring nucleoside hydrolase BA6348_21215 PF00005 ABC transporter BA6348_21215 PF02687 FtsX-like permease family BA6348_21215 PF12704 MacB-like periplasmic core domain BA6348_21220 PF00005 ABC transporter BA6348_21225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA6348_21230 PF00512 His Kinase A (phospho-acceptor) domain BA6348_21230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_21230 PF00989 PAS fold BA6348_21230 PF00672 HAMP domain BA6348_21230 PF18698 Histidine kinase sensor domain BA6348_21235 PF00486 Transcriptional regulatory protein, C terminal BA6348_21235 PF00072 Response regulator receiver domain BA6348_21240 PF00881 Nitroreductase family BA6348_21245 PF00270 DEAD/DEAH box helicase BA6348_21245 PF04408 Helicase associated domain (HA2) BA6348_21245 PF08482 ATP-dependent helicase C-terminal BA6348_21245 PF00271 Helicase conserved C-terminal domain BA6348_21260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA6348_21265 PF01145 SPFH domain / Band 7 family BA6348_21285 PF07690 Major Facilitator Superfamily BA6348_21290 PF03466 LysR substrate binding domain BA6348_21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_21300 PF00664 ABC transporter transmembrane region BA6348_21300 PF00005 ABC transporter BA6348_21305 PF00005 ABC transporter BA6348_21305 PF00664 ABC transporter transmembrane region BA6348_21315 PF01614 Bacterial transcriptional regulator BA6348_21315 PF09339 IclR helix-turn-helix domain BA6348_21325 PF01327 Polypeptide deformylase BA6348_21345 PF01842 ACT domain BA6348_21345 PF00551 Formyl transferase BA6348_21355 PF01709 Transcriptional regulator BA6348_21370 PF01297 Zinc-uptake complex component A periplasmic BA6348_21375 PF00950 ABC 3 transport family BA6348_21380 PF00005 ABC transporter BA6348_21385 PF00171 Aldehyde dehydrogenase family BA6348_21395 PF00465 Iron-containing alcohol dehydrogenase BA6348_21400 PF00324 Amino acid permease BA6348_21405 PF00158 Sigma-54 interaction domain BA6348_21415 PF00512 His Kinase A (phospho-acceptor) domain BA6348_21415 PF01627 Hpt domain BA6348_21415 PF00072 Response regulator receiver domain BA6348_21415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA6348_21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_21415 PF00672 HAMP domain BA6348_21420 PF00486 Transcriptional regulatory protein, C terminal BA6348_21420 PF00072 Response regulator receiver domain BA6348_21425 PF00563 EAL domain BA6348_21425 PF00990 Diguanylate cyclase, GGDEF domain BA6348_21425 PF03707 Bacterial signalling protein N terminal repeat BA6348_21425 PF13188 PAS domain BA6348_21450 PF00183 Hsp90 protein BA6348_21470 PF00561 alpha/beta hydrolase fold BA6348_21475 PF00664 ABC transporter transmembrane region BA6348_21475 PF00005 ABC transporter BA6348_21480 PF04954 Siderophore-interacting protein BA6348_21480 PF00005 ABC transporter BA6348_21480 PF08021 Siderophore-interacting FAD-binding domain BA6348_21480 PF00664 ABC transporter transmembrane region BA6348_21485 PF00005 ABC transporter BA6348_21500 PF12833 Helix-turn-helix domain BA6348_21500 PF12852 Cupin BA6348_21535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_21535 PF03466 LysR substrate binding domain BA6348_21545 PF01032 FecCD transport family BA6348_21550 PF01032 FecCD transport family BA6348_21555 PF01497 Periplasmic binding protein BA6348_21560 PF07690 Major Facilitator Superfamily BA6348_21570 PF01497 Periplasmic binding protein BA6348_21570 PF12833 Helix-turn-helix domain BA6348_21610 PF00106 short chain dehydrogenase BA6348_21630 PF01497 Periplasmic binding protein BA6348_21635 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_21635 PF00107 Zinc-binding dehydrogenase BA6348_21645 PF01479 S4 domain BA6348_21645 PF00579 tRNA synthetases class I (W and Y) BA6348_21665 PF12833 Helix-turn-helix domain BA6348_21665 PF02311 AraC-like ligand binding domain BA6348_21675 PF17874 MalT-like TPR region BA6348_21675 PF00196 Bacterial regulatory proteins, luxR family BA6348_21690 PF01497 Periplasmic binding protein BA6348_21695 PF12833 Helix-turn-helix domain BA6348_21695 PF02805 Metal binding domain of Ada BA6348_21700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_21700 PF06580 Histidine kinase BA6348_21705 PF01061 ABC-2 type transporter BA6348_21710 PF00005 ABC transporter BA6348_21710 PF13732 Domain of unknown function (DUF4162) BA6348_21715 PF01797 Transposase IS200 like BA6348_21730 PF00665 Integrase core domain BA6348_21730 PF13276 HTH-like domain BA6348_21765 PF01610 Transposase BA6348_21765 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_21765 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_21795 PF13276 HTH-like domain BA6348_21795 PF13333 Integrase core domain BA6348_21795 PF00665 Integrase core domain BA6348_21805 PF00266 Aminotransferase class-V BA6348_21865 PF02368 Bacterial Ig-like domain (group 2) BA6348_21865 PF11999 Protein of unknown function (DUF3494) BA6348_21875 PF07319 Primosomal protein DnaI N-terminus BA6348_21875 PF01695 IstB-like ATP binding protein BA6348_21885 PF03477 ATP cone domain BA6348_21890 PF01966 HD domain BA6348_21890 PF11871 Domain of unknown function (DUF3391) BA6348_21895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA6348_21895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA6348_21900 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BA6348_21900 PF01464 Transglycosylase SLT domain BA6348_21905 PF01121 Dephospho-CoA kinase BA6348_21910 PF06827 Zinc finger found in FPG and IleRS BA6348_21910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BA6348_21910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BA6348_21915 PF01367 5'-3' exonuclease, C-terminal SAM fold BA6348_21915 PF00476 DNA polymerase family A BA6348_21915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA6348_21920 PF04748 Divergent polysaccharide deacetylase BA6348_21925 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_21935 PF07690 Major Facilitator Superfamily BA6348_21940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA6348_21950 PF01047 MarR family BA6348_21955 PF04294 VanW like protein BA6348_21965 PF01895 PhoU domain BA6348_21970 PF00989 PAS fold BA6348_21970 PF00512 His Kinase A (phospho-acceptor) domain BA6348_21970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_21970 PF16736 Single Cache-like BA6348_21975 PF00072 Response regulator receiver domain BA6348_21975 PF00486 Transcriptional regulatory protein, C terminal BA6348_21995 PF00056 lactate/malate dehydrogenase, NAD binding domain BA6348_21995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA6348_22000 PF00180 Isocitrate/isopropylmalate dehydrogenase BA6348_22005 PF00285 Citrate synthase, C-terminal domain BA6348_22010 PF01594 AI-2E family transporter BA6348_22015 PF04186 FxsA cytoplasmic membrane protein BA6348_22020 PF03061 Thioesterase superfamily BA6348_22035 PF17975 Ribonucleotide reductase alpha domain BA6348_22035 PF02867 Ribonucleotide reductase, barrel domain BA6348_22075 PF02887 Pyruvate kinase, alpha/beta domain BA6348_22075 PF00224 Pyruvate kinase, barrel domain BA6348_22075 PF00391 PEP-utilising enzyme, mobile domain BA6348_22080 PF00365 Phosphofructokinase BA6348_22085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BA6348_22090 PF01039 Carboxyl transferase domain BA6348_22090 PF17848 Acetyl-coA carboxylase zinc finger domain BA6348_22100 PF00392 Bacterial regulatory proteins, gntR family BA6348_22100 PF07729 FCD domain BA6348_22105 PF00390 Malic enzyme, N-terminal domain BA6348_22105 PF03949 Malic enzyme, NAD binding domain BA6348_22110 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA6348_22110 PF02811 PHP domain BA6348_22110 PF01336 OB-fold nucleic acid binding domain BA6348_22110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA6348_22110 PF14579 Helix-hairpin-helix motif BA6348_22125 PF01022 Bacterial regulatory protein, arsR family BA6348_22130 PF00392 Bacterial regulatory proteins, gntR family BA6348_22130 PF03061 Thioesterase superfamily BA6348_22130 PF00571 CBS domain BA6348_22130 PF07085 DRTGG domain BA6348_22135 PF04286 Protein of unknown function (DUF445) BA6348_22145 PF14398 YheC/D like ATP-grasp BA6348_22150 PF14398 YheC/D like ATP-grasp BA6348_22185 PF00132 Bacterial transferase hexapeptide (six repeats) BA6348_22185 PF00483 Nucleotidyl transferase BA6348_22195 PF01380 SIS domain BA6348_22200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA6348_22200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA6348_22200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA6348_22205 PF00072 Response regulator receiver domain BA6348_22205 PF00486 Transcriptional regulatory protein, C terminal BA6348_22210 PF00535 Glycosyl transferase family 2 BA6348_22225 PF00578 AhpC/TSA family BA6348_22225 PF10417 C-terminal domain of 1-Cys peroxiredoxin BA6348_22235 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_22245 PF00990 Diguanylate cyclase, GGDEF domain BA6348_22245 PF07694 5TMR of 5TMR-LYT BA6348_22255 PF00512 His Kinase A (phospho-acceptor) domain BA6348_22255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_22255 PF08447 PAS fold BA6348_22255 PF00989 PAS fold BA6348_22260 PF13580 SIS domain BA6348_22265 PF01869 BadF/BadG/BcrA/BcrD ATPase family BA6348_22270 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_22275 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_22285 PF00144 Beta-lactamase BA6348_22290 PF01418 Helix-turn-helix domain, rpiR family BA6348_22290 PF01380 SIS domain BA6348_22295 PF01979 Amidohydrolase family BA6348_22325 PF05922 Peptidase inhibitor I9 BA6348_22325 PF00082 Subtilase family BA6348_22350 PF01032 FecCD transport family BA6348_22355 PF00005 ABC transporter BA6348_22360 PF01243 Pyridoxamine 5'-phosphate oxidase BA6348_22360 PF10615 Protein of unknown function (DUF2470) BA6348_22370 PF01546 Peptidase family M20/M25/M40 BA6348_22370 PF07687 Peptidase dimerisation domain BA6348_22375 PF07687 Peptidase dimerisation domain BA6348_22375 PF01546 Peptidase family M20/M25/M40 BA6348_22390 PF00440 Bacterial regulatory proteins, tetR family BA6348_22395 PF00579 tRNA synthetases class I (W and Y) BA6348_22405 PF02592 Putative vitamin uptake transporter BA6348_22420 PF00005 ABC transporter BA6348_22435 PF02653 Branched-chain amino acid transport system / permease component BA6348_22440 PF00501 AMP-binding enzyme BA6348_22445 PF00005 ABC transporter BA6348_22445 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA6348_22455 PF00860 Permease family BA6348_22460 PF03466 LysR substrate binding domain BA6348_22460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_22470 PF04463 Protein of unknown function (DUF523) BA6348_22475 PF00485 Phosphoribulokinase / Uridine kinase family BA6348_22485 PF08281 Sigma-70, region 4 BA6348_22485 PF04542 Sigma-70 region 2 BA6348_22490 PF00210 Ferritin-like domain BA6348_22495 PF07687 Peptidase dimerisation domain BA6348_22495 PF01546 Peptidase family M20/M25/M40 BA6348_22500 PF17676 LD-carboxypeptidase C-terminal domain BA6348_22500 PF02016 LD-carboxypeptidase N-terminal domain BA6348_22505 PF00158 Sigma-54 interaction domain BA6348_22510 PF08279 HTH domain BA6348_22510 PF00072 Response regulator receiver domain BA6348_22515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_22515 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA6348_22515 PF17203 Single cache domain 3 BA6348_22520 PF03480 Bacterial extracellular solute-binding protein, family 7 BA6348_22525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_22525 PF00989 PAS fold BA6348_22525 PF16736 Single Cache-like BA6348_22525 PF00512 His Kinase A (phospho-acceptor) domain BA6348_22530 PF00486 Transcriptional regulatory protein, C terminal BA6348_22530 PF00072 Response regulator receiver domain BA6348_22540 PF00375 Sodium:dicarboxylate symporter family BA6348_22550 PF02080 TrkA-C domain BA6348_22555 PF00999 Sodium/hydrogen exchanger family BA6348_22560 PF00578 AhpC/TSA family BA6348_22580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_22580 PF10414 Sirohaem synthase dimerisation region BA6348_22580 PF14824 Sirohaem biosynthesis protein central BA6348_22585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_22590 PF02277 Phosphoribosyltransferase BA6348_22595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA6348_22595 PF07685 CobB/CobQ-like glutamine amidotransferase domain BA6348_22600 PF07685 CobB/CobQ-like glutamine amidotransferase domain BA6348_22600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA6348_22605 PF11761 Cobalamin biosynthesis central region BA6348_22605 PF11760 Cobalamin synthesis G N-terminal BA6348_22605 PF01890 Cobalamin synthesis G C-terminus BA6348_22610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_22615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_22620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_22625 PF01888 CbiD BA6348_22630 PF02570 Precorrin-8X methylmutase BA6348_22635 PF02571 Precorrin-6x reductase CbiJ/CobK BA6348_22640 PF01903 CbiX BA6348_22645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA6348_22645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA6348_22650 PF03186 CobD/Cbib protein BA6348_22655 PF00300 Histidine phosphatase superfamily (branch 1) BA6348_22660 PF02654 Cobalamin-5-phosphate synthase BA6348_22665 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BA6348_22670 PF00155 Aminotransferase class I and II BA6348_22675 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BA6348_22675 PF12557 Cob(I)alamin adenosyltransferase N terminal BA6348_22680 PF01047 MarR family BA6348_22715 PF01645 Conserved region in glutamate synthase BA6348_22720 PF10417 C-terminal domain of 1-Cys peroxiredoxin BA6348_22720 PF00578 AhpC/TSA family BA6348_22750 PF00005 ABC transporter BA6348_22760 PF01966 HD domain BA6348_22760 PF13286 Phosphohydrolase-associated domain BA6348_22765 PF08664 YcbB domain BA6348_22765 PF00072 Response regulator receiver domain BA6348_22770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_22775 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_22780 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_22785 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA6348_22790 PF00005 ABC transporter BA6348_22795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_22810 PF12823 Domain of unknown function (DUF3817) BA6348_22820 PF07690 Major Facilitator Superfamily BA6348_22825 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA6348_22835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BA6348_22840 PF00510 Cytochrome c oxidase subunit III BA6348_22845 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA6348_22850 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BA6348_22860 PF05145 Transition state regulatory protein AbrB BA6348_22865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_22865 PF03466 LysR substrate binding domain BA6348_22870 PF03741 Integral membrane protein TerC family BA6348_22895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA6348_22895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA6348_22900 PF04293 SpoVR like protein BA6348_22910 PF04241 Protein of unknown function (DUF423) BA6348_22920 PF13538 UvrD-like helicase C-terminal domain BA6348_22945 PF12706 Beta-lactamase superfamily domain BA6348_22955 PF00042 Globin BA6348_22955 PF00970 Oxidoreductase FAD-binding domain BA6348_22955 PF00175 Oxidoreductase NAD-binding domain BA6348_22970 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BA6348_22975 PF00994 Probable molybdopterin binding domain BA6348_22975 PF03454 MoeA C-terminal region (domain IV) BA6348_22975 PF03453 MoeA N-terminal region (domain I and II) BA6348_22980 PF01568 Molydopterin dinucleotide binding domain BA6348_22980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA6348_22980 PF12838 4Fe-4S dicluster domain BA6348_22980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BA6348_22980 PF00384 Molybdopterin oxidoreductase BA6348_22990 PF07690 Major Facilitator Superfamily BA6348_22995 PF02634 FdhD/NarQ family BA6348_23000 PF12804 MobA-like NTP transferase domain BA6348_23005 PF00210 Ferritin-like domain BA6348_23015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_23015 PF00672 HAMP domain BA6348_23015 PF02743 Cache domain BA6348_23020 PF00107 Zinc-binding dehydrogenase BA6348_23020 PF08240 Alcohol dehydrogenase GroES-like domain BA6348_23030 PF01638 HxlR-like helix-turn-helix BA6348_23075 PF04829 Pre-toxin domain with VENN motif BA6348_23075 PF13332 Hemagglutinin repeat BA6348_23075 PF05860 haemagglutination activity domain BA6348_23085 PF00239 Resolvase, N terminal domain BA6348_23145 PF00459 Inositol monophosphatase family BA6348_23160 PF00324 Amino acid permease BA6348_23170 PF03466 LysR substrate binding domain BA6348_23170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_23175 PF03788 LrgA family BA6348_23180 PF04172 LrgB-like family BA6348_23185 PF01925 Sulfite exporter TauE/SafE BA6348_23195 PF07849 Protein of unknown function (DUF1641) BA6348_23205 PF00155 Aminotransferase class I and II BA6348_23210 PF01037 Lrp/AsnC ligand binding domain BA6348_23230 PF00857 Isochorismatase family BA6348_23235 PF01467 Cytidylyltransferase-like BA6348_23245 PF03707 Bacterial signalling protein N terminal repeat BA6348_23245 PF00563 EAL domain BA6348_23245 PF00990 Diguanylate cyclase, GGDEF domain BA6348_23255 PF02086 D12 class N6 adenine-specific DNA methyltransferase BA6348_23260 PF01381 Helix-turn-helix BA6348_23275 PF01070 FMN-dependent dehydrogenase BA6348_23300 PF03551 Transcriptional regulator PadR-like family BA6348_23310 PF00005 ABC transporter BA6348_23315 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_23325 PF08713 DNA alkylation repair enzyme BA6348_23335 PF03591 AzlC protein BA6348_23340 PF01978 Sugar-specific transcriptional regulator TrmB BA6348_23340 PF11495 Archaeal transcriptional regulator TrmB BA6348_23355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_23355 PF00672 HAMP domain BA6348_23355 PF02743 Cache domain BA6348_23360 PF00990 Diguanylate cyclase, GGDEF domain BA6348_23360 PF00072 Response regulator receiver domain BA6348_23385 PF09827 CRISPR associated protein Cas2 BA6348_23390 PF01867 CRISPR associated protein Cas1 BA6348_23390 PF01930 Domain of unknown function DUF83 BA6348_23405 PF02525 Flavodoxin-like fold BA6348_23415 PF04285 Protein of unknown function (DUF444) BA6348_23420 PF06798 PrkA serine protein kinase C-terminal domain BA6348_23420 PF08298 PrkA AAA domain BA6348_23445 PF00588 SpoU rRNA Methylase family BA6348_23455 PF12671 Putative amidase domain BA6348_23460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA6348_23460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BA6348_23465 PF08331 Domain of unknown function (DUF1730) BA6348_23470 PF00075 RNase H BA6348_23480 PF00860 Permease family BA6348_23490 PF01497 Periplasmic binding protein BA6348_23500 PF01609 Transposase DDE domain BA6348_23515 PF00664 ABC transporter transmembrane region BA6348_23515 PF00005 ABC transporter BA6348_23520 PF12833 Helix-turn-helix domain BA6348_23520 PF00072 Response regulator receiver domain BA6348_23610 PF11023 Zinc-ribbon containing domain BA6348_23615 PF00704 Glycosyl hydrolases family 18 BA6348_23620 PF01475 Ferric uptake regulator family BA6348_23625 PF00730 HhH-GPD superfamily base excision DNA repair protein BA6348_23625 PF00633 Helix-hairpin-helix motif BA6348_23625 PF10576 Iron-sulfur binding domain of endonuclease III BA6348_23630 PF16363 GDP-mannose 4,6 dehydratase BA6348_23635 PF01923 Cobalamin adenosyltransferase BA6348_23640 PF13649 Methyltransferase domain BA6348_23645 PF05343 M42 glutamyl aminopeptidase BA6348_23650 PF00578 AhpC/TSA family BA6348_23660 PF13419 Haloacid dehalogenase-like hydrolase BA6348_23665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA6348_23665 PF03129 Anticodon binding domain BA6348_23665 PF09180 Prolyl-tRNA synthetase, C-terminal BA6348_23670 PF12822 ECF transporter, substrate-specific component BA6348_23690 PF00005 ABC transporter BA6348_23700 PF00202 Aminotransferase class-III BA6348_23705 PF04298 Putative neutral zinc metallopeptidase BA6348_23710 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA6348_23710 PF03807 NADP oxidoreductase coenzyme F420-dependent BA6348_23715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BA6348_23715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BA6348_23730 PF00083 Sugar (and other) transporter BA6348_23730 PF07690 Major Facilitator Superfamily BA6348_23735 PF00005 ABC transporter BA6348_23735 PF00664 ABC transporter transmembrane region BA6348_23740 PF04167 Protein of unknown function (DUF402) BA6348_23745 PF13508 Acetyltransferase (GNAT) domain BA6348_23745 PF00583 Acetyltransferase (GNAT) family BA6348_23760 PF02743 Cache domain BA6348_23760 PF00672 HAMP domain BA6348_23760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_23770 PF00633 Helix-hairpin-helix motif BA6348_23770 PF14815 NUDIX domain BA6348_23770 PF00730 HhH-GPD superfamily base excision DNA repair protein BA6348_23780 PF04307 LexA-binding, inner membrane-associated putative hydrolase BA6348_23790 PF02627 Carboxymuconolactone decarboxylase family BA6348_23800 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BA6348_23805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA6348_23805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA6348_23810 PF01925 Sulfite exporter TauE/SafE BA6348_23825 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_23825 PF11741 AMIN domain BA6348_23835 PF00149 Calcineurin-like phosphoesterase BA6348_23840 PF00072 Response regulator receiver domain BA6348_23840 PF00196 Bacterial regulatory proteins, luxR family BA6348_23845 PF00672 HAMP domain BA6348_23845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_23845 PF07730 Histidine kinase BA6348_23850 PF09922 Cell wall-active antibiotics response 4TMS YvqF BA6348_23855 PF00398 Ribosomal RNA adenine dimethylase BA6348_23860 PF04012 PspA/IM30 family BA6348_23870 PF01476 LysM domain BA6348_23870 PF00877 NlpC/P60 family BA6348_23870 PF08239 Bacterial SH3 domain BA6348_23875 PF00486 Transcriptional regulatory protein, C terminal BA6348_23875 PF00072 Response regulator receiver domain BA6348_23880 PF00989 PAS fold BA6348_23880 PF00512 His Kinase A (phospho-acceptor) domain BA6348_23880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_23880 PF16736 Single Cache-like BA6348_23885 PF00067 Cytochrome P450 BA6348_23890 PF02632 BioY family BA6348_23910 PF00585 C-terminal regulatory domain of Threonine dehydratase BA6348_23910 PF00291 Pyridoxal-phosphate dependent enzyme BA6348_23920 PF05958 tRNA (Uracil-5-)-methyltransferase BA6348_23920 PF01938 TRAM domain BA6348_23965 PF00293 NUDIX domain BA6348_23965 PF13344 Haloacid dehalogenase-like hydrolase BA6348_23980 PF01323 DSBA-like thioredoxin domain BA6348_23985 PF08402 TOBE domain BA6348_23985 PF00005 ABC transporter BA6348_23995 PF13416 Bacterial extracellular solute-binding protein BA6348_24000 PF18719 ArlS sensor domain BA6348_24000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_24000 PF00512 His Kinase A (phospho-acceptor) domain BA6348_24005 PF00486 Transcriptional regulatory protein, C terminal BA6348_24005 PF00072 Response regulator receiver domain BA6348_24010 PF00080 Copper/zinc superoxide dismutase (SODC) BA6348_24015 PF02621 Menaquinone biosynthesis BA6348_24020 PF01048 Phosphorylase superfamily BA6348_24030 PF00313 'Cold-shock' DNA-binding domain BA6348_24035 PF04346 Ethanolamine utilisation protein, EutH BA6348_24045 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BA6348_24045 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BA6348_24050 PF00512 His Kinase A (phospho-acceptor) domain BA6348_24050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_24055 PF00072 Response regulator receiver domain BA6348_24055 PF00486 Transcriptional regulatory protein, C terminal BA6348_24065 PF00005 ABC transporter BA6348_24095 PF00892 EamA-like transporter family BA6348_24115 PF00672 HAMP domain BA6348_24115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_24115 PF00512 His Kinase A (phospho-acceptor) domain BA6348_24120 PF00072 Response regulator receiver domain BA6348_24120 PF00486 Transcriptional regulatory protein, C terminal BA6348_24125 PF05525 Branched-chain amino acid transport protein BA6348_24130 PF00730 HhH-GPD superfamily base excision DNA repair protein BA6348_24135 PF01619 Proline dehydrogenase BA6348_24140 PF00989 PAS fold BA6348_24140 PF00158 Sigma-54 interaction domain BA6348_24140 PF02954 Bacterial regulatory protein, Fis family BA6348_24145 PF00072 Response regulator receiver domain BA6348_24145 PF00486 Transcriptional regulatory protein, C terminal BA6348_24155 PF07995 Glucose / Sorbosone dehydrogenase BA6348_24165 PF10776 Protein of unknown function (DUF2600) BA6348_24170 PF08664 YcbB domain BA6348_24170 PF00072 Response regulator receiver domain BA6348_24175 PF16868 NMT1-like family BA6348_24190 PF13509 S1 domain BA6348_24190 PF17783 CvfB-like winged helix domain BA6348_24195 PF02673 Bacitracin resistance protein BacA BA6348_24215 PF00909 Ammonium Transporter Family BA6348_24225 PF02811 PHP domain BA6348_24225 PF11490 DNA polymerase III polC-type N-terminus II BA6348_24225 PF14480 DNA polymerase III polC-type N-terminus I BA6348_24225 PF00929 Exonuclease BA6348_24225 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA6348_24225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA6348_24225 PF14579 Helix-hairpin-helix motif BA6348_24235 PF03129 Anticodon binding domain BA6348_24235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA6348_24235 PF04073 Aminoacyl-tRNA editing domain BA6348_24245 PF01513 ATP-NAD kinase BA6348_24250 PF00293 NUDIX domain BA6348_24270 PF01266 FAD dependent oxidoreductase BA6348_24275 PF00342 Phosphoglucose isomerase BA6348_24280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA6348_24285 PF00005 ABC transporter BA6348_24290 PF02687 FtsX-like permease family BA6348_24290 PF12704 MacB-like periplasmic core domain BA6348_24325 PF01595 Cyclin M transmembrane N-terminal domain BA6348_24325 PF03471 Transporter associated domain BA6348_24325 PF00571 CBS domain BA6348_24335 PF00893 Small Multidrug Resistance protein BA6348_24340 PF00893 Small Multidrug Resistance protein BA6348_24345 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA6348_24350 PF12697 Alpha/beta hydrolase family BA6348_24365 PF01965 DJ-1/PfpI family BA6348_24370 PF01638 HxlR-like helix-turn-helix BA6348_24375 PF13677 Membrane MotB of proton-channel complex MotA/MotB BA6348_24375 PF00691 OmpA family BA6348_24380 PF01618 MotA/TolQ/ExbB proton channel family BA6348_24385 PF02535 ZIP Zinc transporter BA6348_24400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_24400 PF12729 Four helix bundle sensory module for signal transduction BA6348_24400 PF00672 HAMP domain BA6348_24405 PF01266 FAD dependent oxidoreductase BA6348_24415 PF00892 EamA-like transporter family BA6348_24420 PF00583 Acetyltransferase (GNAT) family BA6348_24425 PF04172 LrgB-like family BA6348_24430 PF03788 LrgA family BA6348_24435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA6348_24435 PF03466 LysR substrate binding domain BA6348_24445 PF00480 ROK family BA6348_24445 PF01047 MarR family BA6348_24450 PF04204 Homoserine O-succinyltransferase BA6348_24460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BA6348_24460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BA6348_24465 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BA6348_24465 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BA6348_24465 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BA6348_24470 PF03473 MOSC domain BA6348_24470 PF03475 3-alpha domain BA6348_24475 PF01479 S4 domain BA6348_24475 PF00849 RNA pseudouridylate synthase BA6348_24480 PF00392 Bacterial regulatory proteins, gntR family BA6348_24480 PF00155 Aminotransferase class I and II BA6348_24485 PF00892 EamA-like transporter family BA6348_24500 PF02673 Bacitracin resistance protein BacA BA6348_24505 PF00664 ABC transporter transmembrane region BA6348_24505 PF00005 ABC transporter BA6348_24510 PF00005 ABC transporter BA6348_24510 PF00664 ABC transporter transmembrane region BA6348_24515 PF02386 Cation transport protein BA6348_24535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BA6348_24535 PF00356 Bacterial regulatory proteins, lacI family BA6348_24560 PF00005 ABC transporter BA6348_24570 PF12704 MacB-like periplasmic core domain BA6348_24570 PF02687 FtsX-like permease family BA6348_24580 PF01546 Peptidase family M20/M25/M40 BA6348_24585 PF07687 Peptidase dimerisation domain BA6348_24585 PF01546 Peptidase family M20/M25/M40 BA6348_24590 PF03806 AbgT putative transporter family BA6348_24595 PF02868 Thermolysin metallopeptidase, alpha-helical domain BA6348_24595 PF01447 Thermolysin metallopeptidase, catalytic domain BA6348_24595 PF03413 Peptidase propeptide and YPEB domain BA6348_24595 PF07504 Fungalysin/Thermolysin Propeptide Motif BA6348_24605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_24635 PF00375 Sodium:dicarboxylate symporter family BA6348_24640 PF04226 Transglycosylase associated protein BA6348_24645 PF00795 Carbon-nitrogen hydrolase BA6348_24660 PF12796 Ankyrin repeats (3 copies) BA6348_24675 PF01497 Periplasmic binding protein BA6348_24675 PF12833 Helix-turn-helix domain BA6348_24685 PF02675 S-adenosylmethionine decarboxylase BA6348_24690 PF05656 Protein of unknown function (DUF805) BA6348_24700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_24700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_24710 PF00480 ROK family BA6348_24710 PF01325 Iron dependent repressor, N-terminal DNA binding domain BA6348_24715 PF00005 ABC transporter BA6348_24715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_24720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_24720 PF00005 ABC transporter BA6348_24725 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_24725 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_24730 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_24735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_24740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA6348_24740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA6348_24745 PF00480 ROK family BA6348_24750 PF00072 Response regulator receiver domain BA6348_24750 PF00196 Bacterial regulatory proteins, luxR family BA6348_24755 PF07730 Histidine kinase BA6348_24760 PF00487 Fatty acid desaturase BA6348_24775 PF01497 Periplasmic binding protein BA6348_24780 PF12833 Helix-turn-helix domain BA6348_24780 PF02311 AraC-like ligand binding domain BA6348_24785 PF01032 FecCD transport family BA6348_24790 PF01497 Periplasmic binding protein BA6348_24805 PF00005 ABC transporter BA6348_24815 PF07969 Amidohydrolase family BA6348_24825 PF07690 Major Facilitator Superfamily BA6348_24850 PF06146 Phosphate-starvation-inducible E BA6348_24870 PF06750 Bacterial Peptidase A24 N-terminal domain BA6348_24870 PF01478 Type IV leader peptidase family BA6348_24880 PF00482 Type II secretion system (T2SS), protein F BA6348_24885 PF00437 Type II/IV secretion system protein BA6348_24890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BA6348_24890 PF00437 Type II/IV secretion system protein BA6348_24930 PF01266 FAD dependent oxidoreductase BA6348_24960 PF00665 Integrase core domain BA6348_24960 PF13333 Integrase core domain BA6348_24960 PF13276 HTH-like domain BA6348_24980 PF05717 IS66 Orf2 like protein BA6348_24985 PF03050 Transposase IS66 family BA6348_24985 PF13817 IS66 C-terminal element BA6348_24985 PF13007 Transposase C of IS166 homeodomain BA6348_24985 PF13005 zinc-finger binding domain of transposase IS66 BA6348_24990 PF09827 CRISPR associated protein Cas2 BA6348_24995 PF01867 CRISPR associated protein Cas1 BA6348_25015 PF09704 CRISPR-associated protein (Cas_Cas5) BA6348_25025 PF00056 lactate/malate dehydrogenase, NAD binding domain BA6348_25025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA6348_25030 PF00936 BMC domain BA6348_25040 PF06130 Phosphate propanoyltransferase BA6348_25045 PF00936 BMC domain BA6348_25050 PF16365 Ethanolamine utilization protein EutK C-terminus BA6348_25050 PF00936 BMC domain BA6348_25055 PF03319 Ethanolamine utilisation protein EutN/carboxysome BA6348_25060 PF00936 BMC domain BA6348_25065 PF00171 Aldehyde dehydrogenase family BA6348_25065 PF00465 Iron-containing alcohol dehydrogenase BA6348_25080 PF13520 Amino acid permease BA6348_25090 PF00202 Aminotransferase class-III BA6348_25095 PF00455 DeoR C terminal sensor domain BA6348_25095 PF08220 DeoR-like helix-turn-helix domain BA6348_25100 PF02311 AraC-like ligand binding domain BA6348_25100 PF12833 Helix-turn-helix domain BA6348_25150 PF09346 SMI1 / KNR4 family (SUKH-1) BA6348_25155 PF00872 Transposase, Mutator family BA6348_25160 PF18277 AbrB C-terminal domain BA6348_25160 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BA6348_25165 PF01381 Helix-turn-helix BA6348_25170 PF00990 Diguanylate cyclase, GGDEF domain BA6348_25170 PF13185 GAF domain BA6348_25190 PF00293 NUDIX domain BA6348_25195 PF00149 Calcineurin-like phosphoesterase BA6348_25210 PF13361 UvrD-like helicase C-terminal domain BA6348_25210 PF00580 UvrD/REP helicase N-terminal domain BA6348_25225 PF02146 Sir2 family BA6348_25230 PF02146 Sir2 family BA6348_25270 PF01938 TRAM domain BA6348_25270 PF05958 tRNA (Uracil-5-)-methyltransferase BA6348_25275 PF00781 Diacylglycerol kinase catalytic domain BA6348_25280 PF00480 ROK family BA6348_25285 PF00892 EamA-like transporter family BA6348_25290 PF12679 ABC-2 family transporter protein BA6348_25295 PF00005 ABC transporter BA6348_25310 PF04542 Sigma-70 region 2 BA6348_25310 PF08281 Sigma-70, region 4 BA6348_25315 PF02934 GatB/GatE catalytic domain BA6348_25315 PF02637 GatB domain BA6348_25320 PF01425 Amidase BA6348_25325 PF02686 Glu-tRNAGln amidotransferase C subunit BA6348_25335 PF02666 Phosphatidylserine decarboxylase BA6348_25340 PF00990 Diguanylate cyclase, GGDEF domain BA6348_25340 PF03707 Bacterial signalling protein N terminal repeat BA6348_25340 PF00563 EAL domain BA6348_25340 PF13188 PAS domain BA6348_25345 PF00953 Glycosyl transferase family 4 BA6348_25350 PF00171 Aldehyde dehydrogenase family BA6348_25365 PF03120 NAD-dependent DNA ligase OB-fold domain BA6348_25365 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BA6348_25365 PF12826 Helix-hairpin-helix motif BA6348_25365 PF00533 BRCA1 C Terminus (BRCT) domain BA6348_25365 PF01653 NAD-dependent DNA ligase adenylation domain BA6348_25370 PF13361 UvrD-like helicase C-terminal domain BA6348_25370 PF00580 UvrD/REP helicase N-terminal domain BA6348_25375 PF04294 VanW like protein BA6348_25380 PF07786 Protein of unknown function (DUF1624) BA6348_25380 PF04235 Protein of unknown function (DUF418) BA6348_25385 PF13520 Amino acid permease BA6348_25390 PF01884 PcrB family BA6348_25395 PF01371 Trp repressor protein BA6348_25400 PF17479 Protein of unknown function (DUF3048) C-terminal domain BA6348_25400 PF11258 Protein of unknown function (DUF3048) N-terminal domain BA6348_25405 PF00486 Transcriptional regulatory protein, C terminal BA6348_25405 PF00072 Response regulator receiver domain BA6348_25410 PF00512 His Kinase A (phospho-acceptor) domain BA6348_25410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_25410 PF00672 HAMP domain BA6348_25420 PF00478 IMP dehydrogenase / GMP reductase domain BA6348_25420 PF00571 CBS domain BA6348_25440 PF07687 Peptidase dimerisation domain BA6348_25440 PF01546 Peptidase family M20/M25/M40 BA6348_25445 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_25450 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_25460 PF13416 Bacterial extracellular solute-binding protein BA6348_25465 PF01614 Bacterial transcriptional regulator BA6348_25465 PF09339 IclR helix-turn-helix domain BA6348_25480 PF01609 Transposase DDE domain BA6348_25490 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BA6348_25490 PF13542 Helix-turn-helix domain of transposase family ISL3 BA6348_25490 PF01610 Transposase BA6348_25525 PF00155 Aminotransferase class I and II BA6348_25525 PF00392 Bacterial regulatory proteins, gntR family BA6348_25530 PF00005 ABC transporter BA6348_25535 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA6348_25535 PF00005 ABC transporter BA6348_25540 PF11862 Domain of unknown function (DUF3382) BA6348_25540 PF02653 Branched-chain amino acid transport system / permease component BA6348_25545 PF02653 Branched-chain amino acid transport system / permease component BA6348_25550 PF13458 Periplasmic binding protein BA6348_25555 PF13382 Adenine deaminase C-terminal domain BA6348_25555 PF01979 Amidohydrolase family BA6348_25565 PF01047 MarR family BA6348_25575 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BA6348_25575 PF02843 Phosphoribosylglycinamide synthetase, C domain BA6348_25575 PF02844 Phosphoribosylglycinamide synthetase, N domain BA6348_25580 PF01808 AICARFT/IMPCHase bienzyme BA6348_25580 PF02142 MGS-like domain BA6348_25595 PF03707 Bacterial signalling protein N terminal repeat BA6348_25595 PF00563 EAL domain BA6348_25595 PF00990 Diguanylate cyclase, GGDEF domain BA6348_25605 PF00551 Formyl transferase BA6348_25610 PF00586 AIR synthase related protein, N-terminal domain BA6348_25610 PF02769 AIR synthase related protein, C-terminal domain BA6348_25615 PF00156 Phosphoribosyl transferase domain BA6348_25620 PF00586 AIR synthase related protein, N-terminal domain BA6348_25620 PF02769 AIR synthase related protein, C-terminal domain BA6348_25620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BA6348_25630 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BA6348_25635 PF01259 SAICAR synthetase BA6348_25640 PF00465 Iron-containing alcohol dehydrogenase BA6348_25645 PF02073 Thermophilic metalloprotease (M29) BA6348_25680 PF00092 von Willebrand factor type A domain BA6348_25715 PF00092 von Willebrand factor type A domain BA6348_25730 PF00482 Type II secretion system (T2SS), protein F BA6348_25735 PF00437 Type II/IV secretion system protein BA6348_25760 PF01478 Type IV leader peptidase family BA6348_25760 PF06750 Bacterial Peptidase A24 N-terminal domain BA6348_25765 PF13817 IS66 C-terminal element BA6348_25765 PF13007 Transposase C of IS166 homeodomain BA6348_25765 PF03050 Transposase IS66 family BA6348_25765 PF13005 zinc-finger binding domain of transposase IS66 BA6348_25770 PF05717 IS66 Orf2 like protein BA6348_25800 PF02417 Chromate transporter BA6348_25805 PF02417 Chromate transporter BA6348_25810 PF00005 ABC transporter BA6348_25810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_25815 PF00005 ABC transporter BA6348_25815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA6348_25820 PF12911 N-terminal TM domain of oligopeptide transport permease C BA6348_25820 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_25825 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_25830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_25835 PF17805 AsnC-like ligand binding domain BA6348_25835 PF13404 AsnC-type helix-turn-helix domain BA6348_25840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA6348_25845 PF02687 FtsX-like permease family BA6348_25850 PF00005 ABC transporter BA6348_25855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA6348_25860 PF00486 Transcriptional regulatory protein, C terminal BA6348_25860 PF00072 Response regulator receiver domain BA6348_25865 PF04542 Sigma-70 region 2 BA6348_25865 PF08281 Sigma-70, region 4 BA6348_25875 PF00206 Lyase BA6348_25875 PF10397 Adenylosuccinate lyase C-terminus BA6348_25880 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BA6348_25880 PF02222 ATP-grasp domain BA6348_25885 PF00731 AIR carboxylase BA6348_25900 PF03129 Anticodon binding domain BA6348_25900 PF13393 Histidyl-tRNA synthetase BA6348_25905 PF00860 Permease family BA6348_25910 PF00117 Glutamine amidotransferase class-I BA6348_25910 PF00958 GMP synthase C terminal domain BA6348_25910 PF02540 NAD synthase BA6348_25915 PF11992 Domain of unknown function (DUF3488) BA6348_25915 PF13559 Domain of unknown function (DUF4129) BA6348_25915 PF01841 Transglutaminase-like superfamily BA6348_25925 PF17863 AAA lid domain BA6348_25925 PF07726 ATPase family associated with various cellular activities (AAA) BA6348_26060 PF00118 TCP-1/cpn60 chaperonin family BA6348_26065 PF00166 Chaperonin 10 Kd subunit BA6348_26070 PF14504 CAP-associated N-terminal BA6348_26070 PF00188 Cysteine-rich secretory protein family BA6348_26080 PF00902 Sec-independent protein translocase protein (TatC) BA6348_26085 PF02416 mttA/Hcf106 family BA6348_26090 PF00994 Probable molybdopterin binding domain BA6348_26090 PF02464 Competence-damaged protein BA6348_26095 PF00994 Probable molybdopterin binding domain BA6348_26095 PF01967 MoaC family BA6348_26100 PF01812 5-formyltetrahydrofolate cyclo-ligase family BA6348_26105 PF12848 ABC transporter BA6348_26105 PF16326 ABC transporter C-terminal domain BA6348_26105 PF00005 ABC transporter BA6348_26115 PF00814 Glycoprotease family BA6348_26120 PF00583 Acetyltransferase (GNAT) family BA6348_26125 PF00814 Glycoprotease family BA6348_26130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BA6348_26135 PF00586 AIR synthase related protein, N-terminal domain BA6348_26135 PF02769 AIR synthase related protein, C-terminal domain BA6348_26140 PF10263 SprT-like family BA6348_26140 PF17283 SprT-like zinc ribbon domain BA6348_26155 PF09371 Tex-like protein N-terminal domain BA6348_26155 PF17674 HHH domain BA6348_26155 PF16921 Tex protein YqgF-like domain BA6348_26155 PF00575 S1 RNA binding domain BA6348_26160 PF04545 Sigma-70, region 4 BA6348_26160 PF04539 Sigma-70 region 3 BA6348_26160 PF04542 Sigma-70 region 2 BA6348_26165 PF13581 Histidine kinase-like ATPase domain BA6348_26170 PF01740 STAS domain BA6348_26175 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BA6348_26175 PF07228 Stage II sporulation protein E (SpoIIE) BA6348_26180 PF13581 Histidine kinase-like ATPase domain BA6348_26195 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BA6348_26200 PF01402 Ribbon-helix-helix protein, copG family BA6348_26205 PF00842 Alanine racemase, C-terminal domain BA6348_26205 PF01168 Alanine racemase, N-terminal domain BA6348_26230 PF01648 4'-phosphopantetheinyl transferase superfamily BA6348_26255 PF01022 Bacterial regulatory protein, arsR family BA6348_26260 PF00732 GMC oxidoreductase BA6348_26260 PF05199 GMC oxidoreductase BA6348_26275 PF02040 Arsenical pump membrane protein BA6348_26280 PF00005 ABC transporter BA6348_26285 PF00672 HAMP domain BA6348_26285 PF02743 Cache domain BA6348_26285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA6348_26290 PF00005 ABC transporter BA6348_26295 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_26300 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_26305 PF12849 PBP superfamily domain BA6348_26315 PF01520 N-acetylmuramoyl-L-alanine amidase BA6348_26330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_26335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_26340 PF01609 Transposase DDE domain BA6348_26345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_26360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA6348_26365 PF03180 NLPA lipoprotein BA6348_26370 PF00528 Binding-protein-dependent transport system inner membrane component BA6348_26375 PF00005 ABC transporter BA6348_26375 PF09383 NIL domain BA6348_26405 PF06491 Disulphide isomerase BA6348_26425 PF02630 SCO1/SenC