DM57_05080 PF02798 Glutathione S-transferase, N-terminal domain DM57_05095 PF01734 Patatin-like phospholipase DM57_05095 PF12536 DM57_05095 DM57_05100 PF00106 short chain dehydrogenase DM57_05105 PF06314 Acetoacetate decarboxylase (ADC) DM57_05110 PF01569 PAP2 superfamily DM57_05120 PF04954 Siderophore-interacting protein DM57_05120 PF08021 Siderophore-interacting FAD-binding domain DM57_05125 PF03551 Transcriptional regulator PadR-like family DM57_05130 PF00067 Cytochrome P450 DM57_05140 PF05114 Protein of unknown function (DUF692) DM57_05150 PF02310 B12 binding domain DM57_05150 PF04055 Radical SAM superfamily DM57_05155 PF13649 Methyltransferase domain DM57_05160 PF01810 DM57_05160 DM57_05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_05165 PF03466 LysR substrate binding domain DM57_05170 PF00027 Cyclic nucleotide-binding domain DM57_05170 PF13545 Crp-like helix-turn-helix domain DM57_05175 PF00582 Universal stress protein family DM57_05185 PF00171 Aldehyde dehydrogenase family DM57_05190 PF08450 SMP-30/Gluconolaconase/LRE-like region DM57_05205 PF11448 DM57_05205 DM57_05215 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_05215 PF06426 Serine acetyltransferase, N-terminal DM57_05220 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_05225 PF01227 GTP cyclohydrolase I DM57_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_05230 PF03466 LysR substrate binding domain DM57_05235 PF01494 FAD binding domain DM57_05240 PF01144 Coenzyme A transferase DM57_05245 PF01144 Coenzyme A transferase DM57_05250 PF00206 Lyase DM57_05250 PF10397 Adenylosuccinate lyase C-terminus DM57_05255 PF12146 Putative lysophospholipase DM57_05260 PF02627 Carboxymuconolactone decarboxylase family DM57_05265 PF07690 Major Facilitator Superfamily DM57_05275 PF01810 DM57_05275 DM57_05280 PF07690 Major Facilitator Superfamily DM57_05285 PF09828 DM57_05285 DM57_05295 PF09828 DM57_05295 DM57_05300 PF09490 DM57_05300 DM57_05305 PF13628 DM57_05305 DM57_05310 PF13473 Cupredoxin-like domain DM57_05315 PF04542 Sigma-70 region 2 DM57_05315 PF08281 Sigma-70, region 4 DM57_05320 PF00005 ABC transporter DM57_05330 PF03693 Uncharacterised protein family (UPF0156) DM57_05345 PF00816 H-NS histone family DM57_05350 PF00083 Sugar (and other) transporter DM57_05350 PF07690 Major Facilitator Superfamily DM57_05355 PF02743 Cache domain DM57_05360 PF00512 His Kinase A (phospho-acceptor) domain DM57_05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_05365 PF00072 Response regulator receiver domain DM57_05365 PF00158 Sigma-54 interaction domain DM57_05365 PF02954 Bacterial regulatory protein, Fis family DM57_05380 PF08450 SMP-30/Gluconolaconase/LRE-like region DM57_05385 PF12833 Helix-turn-helix domain DM57_05390 PF04185 Phosphoesterase family DM57_05390 PF05506 DM57_05390 DM57_05405 PF13751 DM57_05405 DM57_05410 PF02706 Chain length determinant protein DM57_05410 PF13614 AAA domain DM57_05410 PF13807 DM57_05410 DM57_05415 PF00150 Cellulase (glycosyl hydrolase family 5) DM57_05425 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DM57_05430 PF15984 DM57_05430 DM57_05440 PF09286 Pro-kumamolisin, activation domain DM57_05450 PF11672 DM57_05450 DM57_05455 PF00990 GGDEF domain DM57_05455 PF02743 Cache domain DM57_05465 PF00561 alpha/beta hydrolase fold DM57_05470 PF00743 Flavin-binding monooxygenase-like DM57_05470 PF13450 NAD(P)-binding Rossmann-like domain DM57_05475 PF00106 short chain dehydrogenase DM57_05480 PF00440 Bacterial regulatory proteins, tetR family DM57_05485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_05485 PF03466 LysR substrate binding domain DM57_05490 PF13276 DM57_05490 DM57_05490 PF13683 DM57_05490 DM57_05495 PF01527 Transposase DM57_05505 PF00043 Glutathione S-transferase, C-terminal domain DM57_05505 PF13417 Glutathione S-transferase, N-terminal domain DM57_05510 PF01243 Pyridoxamine 5'-phosphate oxidase DM57_05520 PF01773 Na+ dependent nucleoside transporter N-terminus DM57_05520 PF07662 Na+ dependent nucleoside transporter C-terminus DM57_05525 PF01791 DeoC/LacD family aldolase DM57_05540 PF00591 Glycosyl transferase family, a/b domain DM57_05540 PF02885 Glycosyl transferase family, helical bundle domain DM57_05540 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DM57_05545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DM57_05550 PF04972 BON domain DM57_05555 PF00294 pfkB family carbohydrate kinase DM57_05560 PF00871 Acetokinase family DM57_05565 PF01515 Phosphate acetyl/butaryl transferase DM57_05565 PF01575 MaoC like domain DM57_05570 PF07167 DM57_05570 DM57_05570 PF12551 DM57_05570 DM57_05575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_05575 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM57_05580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DM57_05585 PF09527 DM57_05585 DM57_05590 PF12966 DM57_05590 DM57_05595 PF00119 ATP synthase A chain DM57_05600 PF00137 ATP synthase subunit C DM57_05605 PF00430 ATP synthase B/B' CF(0) DM57_05610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_05610 PF00306 ATP synthase alpha/beta chain, C terminal domain DM57_05610 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM57_05615 PF00231 ATP synthase DM57_05620 PF00107 Zinc-binding dehydrogenase DM57_05620 PF08240 Alcohol dehydrogenase GroES-like domain DM57_05635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_05635 PF17200 DM57_05635 DM57_05640 PF00072 Response regulator receiver domain DM57_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_05640 PF08448 PAS fold DM57_05645 PF12698 ABC-2 family transporter protein DM57_05650 PF00005 ABC transporter DM57_05650 PF12698 ABC-2 family transporter protein DM57_05655 PF13437 HlyD family secretion protein DM57_05660 PF13533 Biotin-lipoyl like DM57_05665 PF02321 Outer membrane efflux protein DM57_05670 PF00440 Bacterial regulatory proteins, tetR family DM57_05675 PF00582 Universal stress protein family DM57_05685 PF02687 DM57_05685 DM57_05685 PF12704 MacB-like periplasmic core domain DM57_05690 PF00005 ABC transporter DM57_05695 PF13533 Biotin-lipoyl like DM57_05700 PF02321 Outer membrane efflux protein DM57_05705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_05705 PF12729 DM57_05705 DM57_05710 PF01583 Adenylylsulphate kinase DM57_05720 PF13469 Sulfotransferase family DM57_05725 PF04972 BON domain DM57_05735 PF03641 Possible lysine decarboxylase DM57_05745 PF12087 DM57_05745 DM57_05755 PF12085 DM57_05755 DM57_05760 PF08240 Alcohol dehydrogenase GroES-like domain DM57_05765 PF00027 Cyclic nucleotide-binding domain DM57_05765 PF13545 Crp-like helix-turn-helix domain DM57_05770 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_05780 PF00753 Metallo-beta-lactamase superfamily DM57_05780 PF07521 RNA-metabolising metallo-beta-lactamase DM57_05780 PF10996 Beta-Casp domain DM57_05785 PF10118 DM57_05785 DM57_05795 PF01610 DM57_05795 DM57_05795 PF13542 DM57_05795 DM57_05795 PF14690 DM57_05795 DM57_05800 PF00072 Response regulator receiver domain DM57_05800 PF00196 Bacterial regulatory proteins, luxR family DM57_05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_05805 PF07730 Histidine kinase DM57_05805 PF17200 DM57_05805 DM57_05815 PF01523 Putative modulator of DNA gyrase DM57_05820 PF01523 Putative modulator of DNA gyrase DM57_05825 PF00583 Acetyltransferase (GNAT) family DM57_05830 PF00583 Acetyltransferase (GNAT) family DM57_05840 PF01425 Amidase DM57_05845 PF13609 Gram-negative porin DM57_05860 PF13899 Thioredoxin-like DM57_05870 PF00905 Penicillin binding protein transpeptidase domain DM57_05870 PF00912 Transglycosylase DM57_05875 PF13200 DM57_05875 DM57_05885 PF01522 Polysaccharide deacetylase DM57_05895 PF04976 DM57_05895 DM57_05900 PF13247 4Fe-4S dicluster domain DM57_05905 PF00384 Molybdopterin oxidoreductase DM57_05905 PF01568 Molydopterin dinucleotide binding domain DM57_05905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM57_05910 PF06821 Serine hydrolase DM57_05915 PF07690 Major Facilitator Superfamily DM57_05920 PF05853 Prokaryotic protein of unknown function (DUF849) DM57_05925 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_05930 PF00107 Zinc-binding dehydrogenase DM57_05930 PF08240 Alcohol dehydrogenase GroES-like domain DM57_05940 PF00196 Bacterial regulatory proteins, luxR family DM57_05945 PF00501 AMP-binding enzyme DM57_05945 PF13193 AMP-binding enzyme C-terminal domain DM57_05950 PF13609 Gram-negative porin DM57_05955 PF00011 Hsp20/alpha crystallin family DM57_05960 PF00881 Nitroreductase family DM57_05965 PF00571 CBS domain DM57_05975 PF00916 DM57_05975 DM57_05975 PF01740 STAS domain DM57_05980 PF00881 Nitroreductase family DM57_05990 PF02867 Ribonucleotide reductase, barrel domain DM57_06000 PF01258 Prokaryotic dksA/traR C4-type zinc finger DM57_06005 PF01734 Patatin-like phospholipase DM57_06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_06005 PF12536 DM57_06005 DM57_06010 PF00732 GMC oxidoreductase DM57_06010 PF05199 GMC oxidoreductase DM57_06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06020 PF03466 LysR substrate binding domain DM57_06025 PF10604 Polyketide cyclase / dehydrase and lipid transport DM57_06030 PF10604 Polyketide cyclase / dehydrase and lipid transport DM57_06035 PF00676 Dehydrogenase E1 component DM57_06035 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal DM57_06040 PF02779 Transketolase, pyrimidine binding domain DM57_06040 PF02780 Transketolase, C-terminal domain DM57_06045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM57_06045 PF00364 Biotin-requiring enzyme DM57_06045 PF02817 e3 binding domain DM57_06050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM57_06050 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_06055 PF03472 Autoinducer binding domain DM57_06065 PF01613 Flavin reductase like domain DM57_06070 PF07690 Major Facilitator Superfamily DM57_06080 PF01648 4'-phosphopantetheinyl transferase superfamily DM57_06085 PF00296 Luciferase-like monooxygenase DM57_06090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM57_06090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM57_06100 PF13085 2Fe-2S iron-sulfur cluster binding domain DM57_06100 PF13534 4Fe-4S dicluster domain DM57_06105 PF02666 DM57_06105 DM57_06105 PF12588 DM57_06105 DM57_06110 PF04972 BON domain DM57_06115 PF00005 ABC transporter DM57_06115 PF00072 Response regulator receiver domain DM57_06115 PF00664 ABC transporter transmembrane region DM57_06125 PF00106 short chain dehydrogenase DM57_06130 PF13242 HAD-hyrolase-like DM57_06135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_06140 PF02543 Carbamoyltransferase DM57_06140 PF16861 DM57_06140 DM57_06145 PF00535 Glycosyl transferase family 2 DM57_06145 PF13632 Glycosyl transferase family group 2 DM57_06150 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_06160 PF00158 Sigma-54 interaction domain DM57_06160 PF02954 Bacterial regulatory protein, Fis family DM57_06165 PF00072 Response regulator receiver domain DM57_06165 PF00158 Sigma-54 interaction domain DM57_06165 PF02954 Bacterial regulatory protein, Fis family DM57_06170 PF00535 Glycosyl transferase family 2 DM57_06175 PF02585 GlcNAc-PI de-N-acetylase DM57_06180 PF00072 Response regulator receiver domain DM57_06180 PF00512 His Kinase A (phospho-acceptor) domain DM57_06180 PF00989 PAS fold DM57_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_06180 PF08448 PAS fold DM57_06185 PF16363 DM57_06185 DM57_06190 PF00534 Glycosyl transferases group 1 DM57_06190 PF13439 Glycosyltransferase Family 4 DM57_06200 PF00106 short chain dehydrogenase DM57_06205 PF11387 DM57_06205 DM57_06220 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_06225 PF13628 DM57_06225 DM57_06235 PF05598 DM57_06235 DM57_06235 PF13751 DM57_06235 DM57_06240 PF00202 Aminotransferase class-III DM57_06250 PF08883 Dopa 4,5-dioxygenase family DM57_06255 PF04055 Radical SAM superfamily DM57_06255 PF11946 DM57_06255 DM57_06255 PF13394 4Fe-4S single cluster domain DM57_06260 PF02401 LytB protein DM57_06265 PF13641 Glycosyltransferase like family 2 DM57_06275 PF01370 NAD dependent epimerase/dehydratase family DM57_06280 PF00708 Acylphosphatase DM57_06290 PF10129 DM57_06290 DM57_06295 PF03972 MmgE/PrpD family DM57_06300 PF13609 Gram-negative porin DM57_06310 PF03328 HpcH/HpaI aldolase/citrate lyase family DM57_06315 PF01614 Bacterial transcriptional regulator DM57_06315 PF09339 IclR helix-turn-helix domain DM57_06330 PF13276 DM57_06330 DM57_06330 PF13683 DM57_06330 DM57_06335 PF01527 Transposase DM57_06340 PF00270 DEAD/DEAH box helicase DM57_06340 PF00271 Helicase conserved C-terminal domain DM57_06340 PF03880 DbpA RNA binding domain DM57_06345 PF13609 Gram-negative porin DM57_06355 PF01546 Peptidase family M20/M25/M40 DM57_06355 PF07687 Peptidase dimerisation domain DM57_06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06360 PF03466 LysR substrate binding domain DM57_06365 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein DM57_06370 PF00487 DM57_06370 DM57_06385 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_06390 PF01266 FAD dependent oxidoreductase DM57_06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06395 PF03466 LysR substrate binding domain DM57_06400 PF00106 short chain dehydrogenase DM57_06410 PF12680 SnoaL-like domain DM57_06415 PF08450 SMP-30/Gluconolaconase/LRE-like region DM57_06420 PF07971 Glycosyl hydrolase family 92 DM57_06425 PF05141 Pyoverdine/dityrosine biosynthesis protein DM57_06430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_06435 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DM57_06435 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DM57_06440 PF00733 Asparagine synthase DM57_06440 PF13537 Glutamine amidotransferase domain DM57_06445 PF00107 Zinc-binding dehydrogenase DM57_06445 PF08240 Alcohol dehydrogenase GroES-like domain DM57_06450 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DM57_06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06455 PF03466 LysR substrate binding domain DM57_06470 PF05936 DM57_06470 DM57_06475 PF12790 Type VI secretion lipoprotein DM57_06480 PF05638 Protein of unknown function (DUF796) DM57_06485 PF05943 DM57_06485 DM57_06490 PF05591 DM57_06490 DM57_06495 PF00004 ATPase family associated with various cellular activities (AAA) DM57_06495 PF07724 AAA domain (Cdc48 subfamily) DM57_06495 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_06500 PF02861 Clp amino terminal domain DM57_06510 PF07024 ImpE protein DM57_06515 PF04965 Gene 25-like lysozyme DM57_06520 PF05947 DM57_06520 DM57_06525 PF06996 DM57_06525 DM57_06530 PF06812 DM57_06530 DM57_06535 PF05954 Phage late control gene D protein (GPD) DM57_06540 PF00805 Pentapeptide repeats (8 copies) DM57_06540 PF09937 DM57_06540 DM57_06540 PF13599 Pentapeptide repeats (9 copies) DM57_06545 PF00805 Pentapeptide repeats (8 copies) DM57_06545 PF13599 Pentapeptide repeats (9 copies) DM57_06550 PF12059 DM57_06550 DM57_06555 PF13665 DM57_06555 DM57_06560 PF08450 SMP-30/Gluconolaconase/LRE-like region DM57_06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06565 PF03466 LysR substrate binding domain DM57_06570 PF02525 Flavodoxin-like fold DM57_06575 PF12833 Helix-turn-helix domain DM57_06580 PF01053 Cys/Met metabolism PLP-dependent enzyme DM57_06585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_06610 PF02626 Allophanate hydrolase subunit 2 DM57_06615 PF02682 Allophanate hydrolase subunit 1 DM57_06620 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DM57_06620 PF02785 Biotin carboxylase C-terminal domain DM57_06620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM57_06625 PF00364 Biotin-requiring enzyme DM57_06630 PF03746 LamB/YcsF family DM57_06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06635 PF03466 LysR substrate binding domain DM57_06640 PF01804 Penicillin amidase DM57_06645 PF00561 alpha/beta hydrolase fold DM57_06650 PF13649 Methyltransferase domain DM57_06660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_06660 PF00672 HAMP domain DM57_06670 PF00158 Sigma-54 interaction domain DM57_06670 PF02954 Bacterial regulatory protein, Fis family DM57_06670 PF06506 Propionate catabolism activator DM57_06670 PF08448 PAS fold DM57_06675 PF13714 Phosphoenolpyruvate phosphomutase DM57_06680 PF00285 Citrate synthase DM57_06685 PF00330 Aconitase family (aconitate hydratase) DM57_06685 PF00694 Aconitase C-terminal domain DM57_06690 PF04303 PrpF protein DM57_06695 PF03061 Thioesterase superfamily DM57_06700 PF08898 DM57_06700 DM57_06705 PF08896 DM57_06705 DM57_06705 PF08898 DM57_06705 DM57_06710 PF08896 DM57_06710 DM57_06710 PF08898 DM57_06710 DM57_06715 PF04055 Radical SAM superfamily DM57_06715 PF13186 Iron-sulfur cluster-binding domain DM57_06720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_06720 PF02203 Tar ligand binding domain homologue DM57_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06735 PF03466 LysR substrate binding domain DM57_06740 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) DM57_06745 PF02308 DM57_06745 DM57_06760 PF00583 Acetyltransferase (GNAT) family DM57_06765 PF13316 DM57_06765 DM57_06770 PF00122 E1-E2 ATPase DM57_06770 PF00403 Heavy-metal-associated domain DM57_06770 PF00702 haloacid dehalogenase-like hydrolase DM57_06775 PF07007 Protein of unknown function (DUF1311) DM57_06785 PF06742 Protein of unknown function (DUF1214) DM57_06785 PF06863 Protein of unknown function (DUF1254) DM57_06790 PF05359 DM57_06790 DM57_06800 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase DM57_06805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_06815 PF00494 Squalene/phytoene synthase DM57_06825 PF03466 LysR substrate binding domain DM57_06830 PF01679 DM57_06830 DM57_06835 PF02322 DM57_06835 DM57_06840 PF01654 DM57_06840 DM57_06845 PF01212 Beta-eliminating lyase DM57_06855 PF00905 Penicillin binding protein transpeptidase domain DM57_06855 PF00912 Transglycosylase DM57_06860 PF03458 DM57_06860 DM57_06865 PF00005 ABC transporter DM57_06875 PF01032 FecCD transport family DM57_06880 PF01497 Periplasmic binding protein DM57_06885 PF05171 Haemin-degrading HemS DM57_06890 PF00593 TonB dependent receptor DM57_06890 PF07715 TonB-dependent Receptor Plug Domain DM57_06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_06900 PF03466 LysR substrate binding domain DM57_06905 PF00528 Binding-protein-dependent transport system inner membrane component DM57_06910 PF00005 ABC transporter DM57_06915 PF13343 Bacterial extracellular solute-binding protein DM57_06920 PF00528 Binding-protein-dependent transport system inner membrane component DM57_06925 PF03641 Possible lysine decarboxylase DM57_06930 PF13609 Gram-negative porin DM57_06935 PF04198 Putative sugar-binding domain DM57_06935 PF13412 Winged helix-turn-helix DNA-binding DM57_06940 PF02502 Ribose/Galactose Isomerase DM57_06945 PF00005 ABC transporter DM57_06950 PF02653 DM57_06950 DM57_06955 PF13407 Periplasmic binding protein domain DM57_06960 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_06965 PF00107 Zinc-binding dehydrogenase DM57_06965 PF08240 Alcohol dehydrogenase GroES-like domain DM57_06970 PF02733 Dak1 domain DM57_06975 PF02734 DAK2 domain DM57_06980 PF00583 Acetyltransferase (GNAT) family DM57_06990 PF11065 DM57_06990 DM57_06995 PF05598 DM57_06995 DM57_06995 PF13751 DM57_06995 DM57_07000 PF02472 Biopolymer transport protein ExbD/TolR DM57_07005 PF01618 DM57_07005 DM57_07010 PF03544 Gram-negative bacterial TonB protein C-terminal DM57_07015 PF04324 BFD-like [2Fe-2S] binding domain DM57_07020 PF01177 Asp/Glu/Hydantoin racemase DM57_07025 PF00210 Ferritin-like domain DM57_07030 PF05681 DM57_07030 DM57_07030 PF05683 Fumarase C-terminus DM57_07035 PF03350 DM57_07035 DM57_07045 PF00501 AMP-binding enzyme DM57_07045 PF13193 AMP-binding enzyme C-terminal domain DM57_07045 PF16177 DM57_07045 DM57_07050 PF13937 DM57_07050 DM57_07055 PF00474 Sodium:solute symporter family DM57_07065 PF13683 DM57_07065 DM57_07070 PF13276 DM57_07070 DM57_07070 PF13683 DM57_07070 DM57_07075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_07075 PF13192 Thioredoxin domain DM57_07080 PF00578 AhpC/TSA family DM57_07080 PF10417 C-terminal domain of 1-Cys peroxiredoxin DM57_07090 PF00881 Nitroreductase family DM57_07100 PF14403 DM57_07100 DM57_07105 PF04168 DM57_07105 DM57_07110 PF01841 Transglutaminase-like superfamily DM57_07110 PF08379 DM57_07110 DM57_07115 PF01841 Transglutaminase-like superfamily DM57_07115 PF08379 DM57_07115 DM57_07115 PF09899 DM57_07115 DM57_07120 PF04168 DM57_07120 DM57_07120 PF14403 DM57_07120 DM57_07125 PF01841 Transglutaminase-like superfamily DM57_07125 PF08379 DM57_07125 DM57_07135 PF07690 Major Facilitator Superfamily DM57_07140 PF04632 DM57_07140 DM57_07145 PF01965 DJ-1/PfpI family DM57_07145 PF12833 Helix-turn-helix domain DM57_07150 PF01965 DJ-1/PfpI family DM57_07155 PF00266 Aminotransferase class-V DM57_07160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_07160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_07165 PF12804 MobA-like NTP transferase domain DM57_07165 PF13714 Phosphoenolpyruvate phosphomutase DM57_07170 PF12804 MobA-like NTP transferase domain DM57_07175 PF03706 DM57_07175 DM57_07185 PF01066 CDP-alcohol phosphatidyltransferase DM57_07190 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DM57_07190 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DM57_07195 PF06812 DM57_07195 DM57_07200 PF13276 DM57_07200 DM57_07200 PF13683 DM57_07200 DM57_07205 PF01527 Transposase DM57_07210 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DM57_07210 PF08479 POTRA domain, ShlB-type DM57_07210 PF17287 DM57_07210 DM57_07215 PF05860 haemagglutination activity domain DM57_07220 PF00330 Aconitase family (aconitate hydratase) DM57_07220 PF00694 Aconitase C-terminal domain DM57_07225 PF03972 MmgE/PrpD family DM57_07235 PF03328 HpcH/HpaI aldolase/citrate lyase family DM57_07240 PF00056 lactate/malate dehydrogenase, NAD binding domain DM57_07240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DM57_07245 PF00392 Bacterial regulatory proteins, gntR family DM57_07245 PF07702 UTRA domain DM57_07250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DM57_07255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DM57_07260 PF00890 FAD binding domain DM57_07260 PF02910 Fumarate reductase flavoprotein C-term DM57_07265 PF13085 2Fe-2S iron-sulfur cluster binding domain DM57_07265 PF13534 4Fe-4S dicluster domain DM57_07270 PF03937 Flavinator of succinate dehydrogenase DM57_07275 PF00285 Citrate synthase DM57_07280 PF02311 AraC-like ligand binding domain DM57_07280 PF12833 Helix-turn-helix domain DM57_07290 PF13276 DM57_07290 DM57_07290 PF13683 DM57_07290 DM57_07295 PF01527 Transposase DM57_07310 PF07350 Protein of unknown function (DUF1479) DM57_07315 PF00456 Transketolase, thiamine diphosphate binding domain DM57_07320 PF01037 AsnC family DM57_07320 PF13412 Winged helix-turn-helix DNA-binding DM57_07330 PF00296 Luciferase-like monooxygenase DM57_07335 PF00330 Aconitase family (aconitate hydratase) DM57_07340 PF08085 DM57_07340 DM57_07345 PF00694 Aconitase C-terminal domain DM57_07350 PF00180 Isocitrate/isopropylmalate dehydrogenase DM57_07360 PF01118 Semialdehyde dehydrogenase, NAD binding domain DM57_07360 PF02774 Semialdehyde dehydrogenase, dimerisation domain DM57_07370 PF01416 tRNA pseudouridine synthase DM57_07375 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DM57_07380 PF00291 Pyridoxal-phosphate dependent enzyme DM57_07385 PF01555 DNA methylase DM57_07390 PF00290 Tryptophan synthase alpha chain DM57_07395 PF01039 Carboxyl transferase domain DM57_07400 PF02875 Mur ligase family, glutamate ligase domain DM57_07400 PF08245 Mur ligase middle domain DM57_07405 PF05036 Sporulation related domain DM57_07410 PF02674 DM57_07410 DM57_07415 PF00156 Phosphoribosyl transferase domain DM57_07415 PF13522 Glutamine amidotransferase domain DM57_07420 PF01053 Cys/Met metabolism PLP-dependent enzyme DM57_07425 PF07883 Cupin domain DM57_07430 PF01370 NAD dependent epimerase/dehydratase family DM57_07435 PF16363 DM57_07435 DM57_07440 PF01757 DM57_07440 DM57_07450 PF01943 DM57_07450 DM57_07455 PF00534 Glycosyl transferases group 1 DM57_07455 PF13439 Glycosyltransferase Family 4 DM57_07470 PF00483 Nucleotidyl transferase DM57_07480 PF01757 DM57_07480 DM57_07485 PF00216 Bacterial DNA-binding protein DM57_07490 PF13609 Gram-negative porin DM57_07495 PF03631 DM57_07495 DM57_07505 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DM57_07510 PF00583 Acetyltransferase (GNAT) family DM57_07515 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_07525 PF00296 Luciferase-like monooxygenase DM57_07530 PF00296 Luciferase-like monooxygenase DM57_07540 PF00005 ABC transporter DM57_07545 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_07550 PF02698 DUF218 domain DM57_07555 PF00384 Molybdopterin oxidoreductase DM57_07555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM57_07565 PF09163 Formate dehydrogenase N, transmembrane DM57_07565 PF13247 4Fe-4S dicluster domain DM57_07570 PF01292 Prokaryotic cytochrome b561 DM57_07575 PF04216 Protein involved in formate dehydrogenase formation DM57_07580 PF03841 L-seryl-tRNA selenium transferase DM57_07580 PF12390 DM57_07580 DM57_07585 PF00009 Elongation factor Tu GTP binding domain DM57_07585 PF03144 Elongation factor Tu domain 2 DM57_07585 PF09106 Elongation factor SelB, winged helix DM57_07585 PF09107 Elongation factor SelB, winged helix DM57_07600 PF10908 DM57_07600 DM57_07625 PF05977 Transmembrane secretion effector DM57_07635 PF00067 Cytochrome P450 DM57_07635 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_07645 PF01734 Patatin-like phospholipase DM57_07660 PF09118 Domain of unknown function (DUF1929) DM57_07660 PF14200 Ricin-type beta-trefoil lectin domain-like DM57_07665 PF00072 Response regulator receiver domain DM57_07665 PF13487 HD domain DM57_07670 PF08495 DM57_07670 DM57_07670 PF10442 DM57_07670 DM57_07675 PF00512 His Kinase A (phospho-acceptor) domain DM57_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_07685 PF07690 Major Facilitator Superfamily DM57_07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_07690 PF03466 LysR substrate binding domain DM57_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_07705 PF03466 LysR substrate binding domain DM57_07710 PF03328 HpcH/HpaI aldolase/citrate lyase family DM57_07715 PF01575 MaoC like domain DM57_07720 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DM57_07720 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DM57_07725 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_07725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_07725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_07730 PF00202 Aminotransferase class-III DM57_07730 PF07690 Major Facilitator Superfamily DM57_07735 PF00501 AMP-binding enzyme DM57_07735 PF00550 Phosphopantetheine attachment site DM57_07735 PF00668 Condensation domain DM57_07735 PF13193 AMP-binding enzyme C-terminal domain DM57_07740 PF01527 Transposase DM57_07745 PF13276 DM57_07745 DM57_07745 PF13683 DM57_07745 DM57_07750 PF00501 AMP-binding enzyme DM57_07750 PF00550 Phosphopantetheine attachment site DM57_07750 PF00668 Condensation domain DM57_07750 PF00975 Thioesterase domain DM57_07750 PF13193 AMP-binding enzyme C-terminal domain DM57_07765 PF01311 DM57_07765 DM57_07765 PF01391 Collagen triple helix repeat (20 copies) DM57_07770 PF09486 DM57_07770 DM57_07775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_07775 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM57_07780 PF02108 DM57_07780 DM57_07785 PF09502 DM57_07785 DM57_07795 PF09487 DM57_07795 DM57_07800 PF09613 DM57_07800 DM57_07805 PF01312 FlhB HrpN YscU SpaS Family DM57_07810 PF00771 FHIPEP family DM57_07820 PF01052 Surface presentation of antigens (SPOA) DM57_07825 PF00813 DM57_07825 DM57_07830 PF01313 DM57_07830 DM57_07855 PF05932 Tir chaperone protein (CesT) family DM57_07860 PF12833 Helix-turn-helix domain DM57_07870 PF13302 Acetyltransferase (GNAT) domain DM57_07875 PF09613 DM57_07875 DM57_07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_07890 PF00072 Response regulator receiver domain DM57_07890 PF00486 Transcriptional regulatory protein, C terminal DM57_07895 PF03958 Bacterial type II/III secretion system short domain DM57_07900 PF00437 Type II/IV secretion system protein DM57_07905 PF10671 Toxin co-regulated pilus biosynthesis protein Q DM57_07910 PF00263 DM57_07910 DM57_07910 PF07655 DM57_07910 DM57_07915 PF06864 DM57_07915 DM57_07925 PF00437 Type II/IV secretion system protein DM57_07930 PF00482 Type II secretion system (T2SS), protein F DM57_07935 PF08805 PilS N terminal DM57_07940 PF07419 PilM DM57_07945 PF04917 DM57_07945 DM57_07945 PF07963 Prokaryotic N-terminal methylation motif DM57_07950 PF00263 DM57_07950 DM57_07950 PF03958 Bacterial type II/III secretion system short domain DM57_07980 PF00491 Arginase family DM57_07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_07985 PF03466 LysR substrate binding domain DM57_08000 PF07804 HipA-like C-terminal domain DM57_08000 PF13657 HipA N-terminal domain DM57_08005 PF01381 Helix-turn-helix DM57_08015 PF03170 Bacterial cellulose synthase subunit DM57_08020 PF01270 Glycosyl hydrolases family 8 DM57_08030 PF10995 DM57_08030 DM57_08040 PF06564 YhjQ protein DM57_08045 PF00535 Glycosyl transferase family 2 DM57_08045 PF03552 Cellulose synthase DM57_08045 PF07238 PilZ domain DM57_08050 PF11658 DM57_08050 DM57_08070 PF00005 ABC transporter DM57_08075 PF00528 Binding-protein-dependent transport system inner membrane component DM57_08080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM57_08085 PF00765 Autoinducer synthetase DM57_08095 PF00196 Bacterial regulatory proteins, luxR family DM57_08095 PF03472 Autoinducer binding domain DM57_08100 PF00501 AMP-binding enzyme DM57_08100 PF13193 AMP-binding enzyme C-terminal domain DM57_08105 PF09859 DM57_08105 DM57_08110 PF01384 DM57_08110 DM57_08120 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DM57_08125 PF01037 AsnC family DM57_08125 PF13412 Winged helix-turn-helix DNA-binding DM57_08130 PF01810 DM57_08130 DM57_08135 PF00082 Subtilase family DM57_08135 PF09286 Pro-kumamolisin, activation domain DM57_08140 PF01391 Collagen triple helix repeat (20 copies) DM57_08145 PF00450 Serine carboxypeptidase DM57_08150 PF01070 FMN-dependent dehydrogenase DM57_08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_08155 PF03466 LysR substrate binding domain DM57_08160 PF07690 Major Facilitator Superfamily DM57_08165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_08170 PF01047 MarR family DM57_08175 PF01447 Thermolysin metallopeptidase, catalytic domain DM57_08175 PF02868 Thermolysin metallopeptidase, alpha-helical domain DM57_08175 PF07504 Fungalysin/Thermolysin Propeptide Motif DM57_08185 PF00486 Transcriptional regulatory protein, C terminal DM57_08200 PF09482 DM57_08200 DM57_08205 PF01514 Secretory protein of YscJ/FliF family DM57_08215 PF09392 Type III secretion needle MxiH like DM57_08220 PF09480 Type III secretion system protein PrgH-EprH (PrgH) DM57_08225 PF12833 Helix-turn-helix domain DM57_08230 PF00263 DM57_08230 DM57_08230 PF03958 Bacterial type II/III secretion system short domain DM57_08235 PF07201 HrpJ-like domain DM57_08240 PF00771 FHIPEP family DM57_08245 PF03519 Invasion protein B family DM57_08250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_08250 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM57_08265 PF01052 Surface presentation of antigens (SPOA) DM57_08270 PF00813 DM57_08270 DM57_08275 PF01313 DM57_08275 DM57_08280 PF01311 DM57_08280 DM57_08285 PF01312 FlhB HrpN YscU SpaS Family DM57_08290 PF07720 Tetratricopeptide repeat DM57_08295 PF04888 DM57_08295 DM57_08295 PF16535 DM57_08295 DM57_08300 PF09599 DM57_08300 DM57_08305 PF00816 H-NS histone family DM57_08310 PF06511 Invasion plasmid antigen IpaD DM57_08320 PF00550 Phosphopantetheine attachment site DM57_08325 PF01464 Transglycosylase SLT domain DM57_08330 PF07487 SopE GEF domain DM57_08340 PF09119 SicP binding DM57_08345 PF05932 Tir chaperone protein (CesT) family DM57_08350 PF00072 Response regulator receiver domain DM57_08350 PF00196 Bacterial regulatory proteins, luxR family DM57_08365 PF12833 Helix-turn-helix domain DM57_08365 PF14525 DM57_08365 DM57_08375 PF05932 Tir chaperone protein (CesT) family DM57_08385 PF13276 DM57_08385 DM57_08385 PF13683 DM57_08385 DM57_08390 PF10636 Hemin uptake protein hemP DM57_08395 PF08982 Domain of unknown function (DUF1857) DM57_08400 PF02678 Pirin DM57_08400 PF05726 Pirin C-terminal cupin domain DM57_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_08405 PF03466 LysR substrate binding domain DM57_08415 PF07690 Major Facilitator Superfamily DM57_08420 PF00440 Bacterial regulatory proteins, tetR family DM57_08420 PF08362 YcdC-like protein, C-terminal region DM57_08425 PF01614 Bacterial transcriptional regulator DM57_08425 PF09339 IclR helix-turn-helix domain DM57_08430 PF00108 Thiolase, N-terminal domain DM57_08430 PF02803 Thiolase, C-terminal domain DM57_08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_08440 PF08447 PAS fold DM57_08445 PF00891 O-methyltransferase DM57_08455 PF00355 Rieske [2Fe-2S] domain DM57_08465 PF00171 Aldehyde dehydrogenase family DM57_08470 PF00202 Aminotransferase class-III DM57_08475 PF00155 Aminotransferase class I and II DM57_08475 PF00392 Bacterial regulatory proteins, gntR family DM57_08480 PF03606 DM57_08480 DM57_08485 PF01614 Bacterial transcriptional regulator DM57_08485 PF09339 IclR helix-turn-helix domain DM57_08490 PF05013 N-formylglutamate amidohydrolase DM57_08495 PF13609 Gram-negative porin DM57_08510 PF00892 EamA-like transporter family DM57_08515 PF00586 AIR synthase related protein, N-terminal domain DM57_08515 PF02769 AIR synthase related protein, C-terminal domain DM57_08535 PF06516 DM57_08535 DM57_08540 PF13663 DM57_08540 DM57_08545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_08545 PF03466 LysR substrate binding domain DM57_08550 PF07859 alpha/beta hydrolase fold DM57_08555 PF13437 HlyD family secretion protein DM57_08555 PF13533 Biotin-lipoyl like DM57_08560 PF00873 AcrB/AcrD/AcrF family DM57_08565 PF02321 Outer membrane efflux protein DM57_08570 PF00375 Sodium:dicarboxylate symporter family DM57_08575 PF00392 Bacterial regulatory proteins, gntR family DM57_08575 PF07729 FCD domain DM57_08580 PF00583 Acetyltransferase (GNAT) family DM57_08585 PF03547 DM57_08585 DM57_08590 PF00501 AMP-binding enzyme DM57_08595 PF00698 Acyl transferase domain DM57_08605 PF00501 AMP-binding enzyme DM57_08605 PF13193 AMP-binding enzyme C-terminal domain DM57_08610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DM57_08610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DM57_08620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DM57_08620 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain DM57_08625 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_08625 PF00550 Phosphopantetheine attachment site DM57_08625 PF00668 Condensation domain DM57_08625 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_08625 PF07993 Male sterility protein DM57_08625 PF08242 Methyltransferase domain DM57_08625 PF08659 KR domain DM57_08625 PF14765 Polyketide synthase dehydratase DM57_08625 PF16197 DM57_08625 DM57_08630 PF00171 Aldehyde dehydrogenase family DM57_08635 PF00202 Aminotransferase class-III DM57_08640 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_08645 PF00856 SET domain DM57_08650 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_08650 PF00501 AMP-binding enzyme DM57_08650 PF00550 Phosphopantetheine attachment site DM57_08650 PF00698 Acyl transferase domain DM57_08650 PF00975 Thioesterase domain DM57_08650 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_08650 PF08659 KR domain DM57_08650 PF13193 AMP-binding enzyme C-terminal domain DM57_08650 PF16197 DM57_08650 DM57_08660 PF00196 Bacterial regulatory proteins, luxR family DM57_08660 PF03472 Autoinducer binding domain DM57_08665 PF03180 NLPA lipoprotein DM57_08670 PF00296 Luciferase-like monooxygenase DM57_08675 PF00005 ABC transporter DM57_08675 PF09383 NIL domain DM57_08680 PF00528 Binding-protein-dependent transport system inner membrane component DM57_08690 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_08690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_08690 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DM57_08700 PF00392 Bacterial regulatory proteins, gntR family DM57_08700 PF07729 FCD domain DM57_08705 PF02754 DM57_08705 DM57_08710 PF02589 Uncharacterised ACR, YkgG family COG1556 DM57_08710 PF11870 DM57_08710 DM57_08710 PF13183 4Fe-4S dicluster domain DM57_08715 PF02589 Uncharacterised ACR, YkgG family COG1556 DM57_08720 PF02652 DM57_08720 DM57_08725 PF07681 DM57_08725 DM57_08730 PF07690 Major Facilitator Superfamily DM57_08735 PF07690 Major Facilitator Superfamily DM57_08740 PF02615 Malate/L-lactate dehydrogenase DM57_08745 PF00171 Aldehyde dehydrogenase family DM57_08750 PF13520 Amino acid permease DM57_08760 PF00701 Dihydrodipicolinate synthetase family DM57_08765 PF05544 Proline racemase DM57_08770 PF01266 FAD dependent oxidoreductase DM57_08775 PF13510 2Fe-2S iron-sulfur cluster binding domain DM57_08780 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_08785 PF08448 PAS fold DM57_08785 PF12833 Helix-turn-helix domain DM57_08800 PF13276 DM57_08800 DM57_08800 PF13683 DM57_08800 DM57_08805 PF01527 Transposase DM57_08820 PF02152 Dihydroneopterin aldolase DM57_08825 PF01165 Ribosomal protein S21 DM57_08830 PF00313 'Cold-shock' DNA-binding domain DM57_08840 PF12587 DM57_08840 DM57_08850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM57_08850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM57_08855 PF02566 OsmC-like protein DM57_08865 PF00512 His Kinase A (phospho-acceptor) domain DM57_08865 PF00989 PAS fold DM57_08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_08865 PF05227 CHASE3 domain DM57_08865 PF13426 PAS domain DM57_08870 PF00072 Response regulator receiver domain DM57_08875 PF00072 Response regulator receiver domain DM57_08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_08875 PF07730 Histidine kinase DM57_08875 PF08447 PAS fold DM57_08880 PF00083 Sugar (and other) transporter DM57_08885 PF05853 Prokaryotic protein of unknown function (DUF849) DM57_08895 PF00732 GMC oxidoreductase DM57_08895 PF05199 GMC oxidoreductase DM57_08900 PF00171 Aldehyde dehydrogenase family DM57_08905 PF00440 Bacterial regulatory proteins, tetR family DM57_08905 PF13977 Bacterial transcriptional repressor DM57_08910 PF01527 Transposase DM57_08915 PF13276 DM57_08915 DM57_08915 PF13683 DM57_08915 DM57_08920 PF12697 Alpha/beta hydrolase family DM57_08925 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DM57_08925 PF03033 Glycosyltransferase family 28 N-terminal domain DM57_08930 PF13641 Glycosyltransferase like family 2 DM57_08940 PF02321 Outer membrane efflux protein DM57_08945 PF00529 HlyD family secretion protein DM57_08945 PF16576 DM57_08945 DM57_08950 PF00326 Prolyl oligopeptidase family DM57_08950 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DM57_08955 PF00581 Rhodanese-like domain DM57_08960 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_08965 PF01381 Helix-turn-helix DM57_08975 PF00266 Aminotransferase class-V DM57_08980 PF01292 Prokaryotic cytochrome b561 DM57_08990 PF01022 Bacterial regulatory protein, arsR family DM57_08995 PF04143 DM57_08995 DM57_09005 PF13420 Acetyltransferase (GNAT) domain DM57_09010 PF11278 DM57_09010 DM57_09020 PF04072 Leucine carboxyl methyltransferase DM57_09025 PF00034 Cytochrome c DM57_09025 PF03150 Di-haem cytochrome c peroxidase DM57_09030 PF00149 Calcineurin-like phosphoesterase DM57_09035 PF04909 Amidohydrolase DM57_09040 PF00392 Bacterial regulatory proteins, gntR family DM57_09040 PF07702 UTRA domain DM57_09050 PF01936 NYN domain DM57_09055 PF01037 AsnC family DM57_09055 PF13412 Winged helix-turn-helix DNA-binding DM57_09060 PF00291 Pyridoxal-phosphate dependent enzyme DM57_09070 PF02311 AraC-like ligand binding domain DM57_09070 PF12833 Helix-turn-helix domain DM57_09075 PF13847 Methyltransferase domain DM57_09085 PF07045 Protein of unknown function (DUF1330) DM57_09090 PF01565 FAD binding domain DM57_09090 PF02913 FAD linked oxidases, C-terminal domain DM57_09095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM57_09100 PF00892 EamA-like transporter family DM57_09105 PF00133 tRNA synthetases class I (I, L, M and V) DM57_09105 PF08264 Anticodon-binding domain of tRNA DM57_09120 PF04185 Phosphoesterase family DM57_09130 PF00144 Beta-lactamase DM57_09135 PF02028 BCCT family transporter DM57_09140 PF01380 SIS domain DM57_09140 PF01418 Helix-turn-helix domain, rpiR family DM57_09145 PF01112 Asparaginase DM57_09150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_09155 PF00528 Binding-protein-dependent transport system inner membrane component DM57_09160 PF00528 Binding-protein-dependent transport system inner membrane component DM57_09160 PF12911 DM57_09160 DM57_09165 PF04951 D-aminopeptidase DM57_09175 PF00775 Dioxygenase DM57_09180 PF00775 Dioxygenase DM57_09180 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DM57_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_09185 PF03466 LysR substrate binding domain DM57_09205 PF00990 GGDEF domain DM57_09205 PF02743 Cache domain DM57_09210 PF01596 O-methyltransferase DM57_09215 PF00793 DAHP synthetase I family DM57_09225 PF03795 YCII-related domain DM57_09235 PF13520 Amino acid permease DM57_09240 PF01527 Transposase DM57_09245 PF13276 DM57_09245 DM57_09245 PF13683 DM57_09245 DM57_09250 PF00270 DEAD/DEAH box helicase DM57_09250 PF00271 Helicase conserved C-terminal domain DM57_09250 PF08494 DM57_09250 DM57_09260 PF04307 DM57_09260 DM57_09265 PF01019 Gamma-glutamyltranspeptidase DM57_09270 PF02321 Outer membrane efflux protein DM57_09285 PF00005 ABC transporter DM57_09285 PF00664 ABC transporter transmembrane region DM57_09285 PF03412 Peptidase C39 family DM57_09295 PF13437 HlyD family secretion protein DM57_09305 PF01527 Transposase DM57_09310 PF13276 DM57_09310 DM57_09310 PF13683 DM57_09310 DM57_09320 PF00440 Bacterial regulatory proteins, tetR family DM57_09325 PF01593 Flavin containing amine oxidoreductase DM57_09335 PF00892 EamA-like transporter family DM57_09340 PF01205 Uncharacterized protein family UPF0029 DM57_09340 PF09186 Domain of unknown function (DUF1949) DM57_09345 PF04542 Sigma-70 region 2 DM57_09345 PF08281 Sigma-70, region 4 DM57_09350 PF00501 AMP-binding enzyme DM57_09355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_09355 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_09360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_09360 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_09365 PF00550 Phosphopantetheine attachment site DM57_09370 PF10014 2OG-Fe dioxygenase DM57_09375 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_09375 PF00501 AMP-binding enzyme DM57_09375 PF00550 Phosphopantetheine attachment site DM57_09375 PF00668 Condensation domain DM57_09375 PF00698 Acyl transferase domain DM57_09375 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_09375 PF13193 AMP-binding enzyme C-terminal domain DM57_09375 PF16197 DM57_09375 DM57_09380 PF13276 DM57_09380 DM57_09380 PF13683 DM57_09380 DM57_09385 PF01527 Transposase DM57_09395 PF04960 Glutaminase DM57_09405 PF00072 Response regulator receiver domain DM57_09405 PF00486 Transcriptional regulatory protein, C terminal DM57_09410 PF00512 His Kinase A (phospho-acceptor) domain DM57_09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_09415 PF01103 Surface antigen DM57_09415 PF01734 Patatin-like phospholipase DM57_09415 PF07244 Surface antigen variable number repeat DM57_09420 PF06723 MreB/Mbl protein DM57_09425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_09430 PF13023 HD domain DM57_09435 PF06202 Amylo-alpha-1,6-glucosidase DM57_09435 PF14742 DM57_09435 DM57_09455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_09460 PF13410 Glutathione S-transferase, C-terminal domain DM57_09460 PF13417 Glutathione S-transferase, N-terminal domain DM57_09465 PF05988 DM57_09465 DM57_09470 PF00512 His Kinase A (phospho-acceptor) domain DM57_09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_09475 PF00072 Response regulator receiver domain DM57_09475 PF00486 Transcriptional regulatory protein, C terminal DM57_09480 PF01380 SIS domain DM57_09480 PF01418 Helix-turn-helix domain, rpiR family DM57_09485 PF09926 DM57_09485 DM57_09490 PF14373 DM57_09490 DM57_09500 PF01965 DJ-1/PfpI family DM57_09500 PF12833 Helix-turn-helix domain DM57_09515 PF01546 Peptidase family M20/M25/M40 DM57_09515 PF07687 Peptidase dimerisation domain DM57_09520 PF04993 TfoX N-terminal domain DM57_09525 PF07298 DM57_09525 DM57_09545 PF01527 Transposase DM57_09555 PF07866 Protein of unknown function (DUF1653) DM57_09560 PF06224 DM57_09560 DM57_09565 PF07690 Major Facilitator Superfamily DM57_09575 PF01204 Trehalase DM57_09585 PF00510 Cytochrome c oxidase subunit III DM57_09590 PF03626 DM57_09590 DM57_09595 PF00196 Bacterial regulatory proteins, luxR family DM57_09595 PF03472 Autoinducer binding domain DM57_09600 PF00196 Bacterial regulatory proteins, luxR family DM57_09600 PF03472 Autoinducer binding domain DM57_09605 PF00733 Asparagine synthase DM57_09605 PF13537 Glutamine amidotransferase domain DM57_09615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM57_09620 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_09620 PF01799 [2Fe-2S] binding domain DM57_09625 PF06719 DM57_09625 DM57_09625 PF12833 Helix-turn-helix domain DM57_09630 PF12680 SnoaL-like domain DM57_09635 PF12087 DM57_09635 DM57_09640 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_09640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_09640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DM57_09645 PF00296 Luciferase-like monooxygenase DM57_09650 PF00512 His Kinase A (phospho-acceptor) domain DM57_09650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_09655 PF00072 Response regulator receiver domain DM57_09655 PF00486 Transcriptional regulatory protein, C terminal DM57_09660 PF06629 DM57_09660 DM57_09665 PF07993 Male sterility protein DM57_09670 PF01047 MarR family DM57_09675 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_09680 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_09685 PF00171 Aldehyde dehydrogenase family DM57_09690 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DM57_09695 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase DM57_09700 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_09710 PF00107 Zinc-binding dehydrogenase DM57_09715 PF13609 Gram-negative porin DM57_09720 PF00005 ABC transporter DM57_09725 PF00528 Binding-protein-dependent transport system inner membrane component DM57_09730 PF13416 Bacterial extracellular solute-binding protein DM57_09735 PF00072 Response regulator receiver domain DM57_09735 PF00486 Transcriptional regulatory protein, C terminal DM57_09740 PF00512 His Kinase A (phospho-acceptor) domain DM57_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_09740 PF08521 DM57_09740 DM57_09745 PF03473 MOSC domain DM57_09745 PF03476 MOSC N-terminal beta barrel domain DM57_09750 PF13609 Gram-negative porin DM57_09765 PF00378 Enoyl-CoA hydratase/isomerase family DM57_09770 PF00842 Alanine racemase, C-terminal domain DM57_09770 PF01168 Alanine racemase, N-terminal domain DM57_09775 PF04248 Domain of unknown function (DUF427) DM57_09780 PF03781 Sulfatase-modifying factor enzyme 1 DM57_09780 PF12867 DinB superfamily DM57_09785 PF10017 DM57_09785 DM57_09790 PF11937 DM57_09790 DM57_09795 PF12146 Putative lysophospholipase DM57_09800 PF13276 DM57_09800 DM57_09800 PF13683 DM57_09800 DM57_09805 PF01527 Transposase DM57_09815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_09815 PF01261 Xylose isomerase-like TIM barrel DM57_09815 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal DM57_09820 PF01220 Dehydroquinase class II DM57_09825 PF08501 Shikimate dehydrogenase substrate binding domain DM57_09830 PF07690 Major Facilitator Superfamily DM57_09835 PF00266 Aminotransferase class-V DM57_09840 PF13343 Bacterial extracellular solute-binding protein DM57_09845 PF00005 ABC transporter DM57_09845 PF08402 TOBE domain DM57_09850 PF00528 Binding-protein-dependent transport system inner membrane component DM57_09855 PF00528 Binding-protein-dependent transport system inner membrane component DM57_09860 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase DM57_09865 PF00171 Aldehyde dehydrogenase family DM57_09870 PF01966 HD domain DM57_09895 PF01527 Transposase DM57_09900 PF13276 DM57_09900 DM57_09900 PF13683 DM57_09900 DM57_09910 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ DM57_09915 PF00248 Aldo/keto reductase family DM57_09920 PF00106 short chain dehydrogenase DM57_09925 PF05598 DM57_09925 DM57_09925 PF13751 DM57_09925 DM57_09930 PF00155 Aminotransferase class I and II DM57_09935 PF00271 Helicase conserved C-terminal domain DM57_09935 PF02151 UvrB/uvrC motif DM57_09935 PF04851 Type III restriction enzyme, res subunit DM57_09935 PF12344 Ultra-violet resistance protein B DM57_09940 PF10634 Fe2+ transport protein DM57_09945 PF13473 Cupredoxin-like domain DM57_09950 PF03239 DM57_09950 DM57_09955 PF12801 DM57_09955 DM57_09960 PF03928 Domain of unknown function (DUF336) DM57_09965 PF01527 Transposase DM57_09970 PF13276 DM57_09970 DM57_09970 PF13683 DM57_09970 DM57_09985 PF13276 DM57_09985 DM57_09985 PF13683 DM57_09985 DM57_09990 PF01527 Transposase DM57_09995 PF05231 DM57_09995 DM57_09995 PF08447 PAS fold DM57_1 PF00437 Type II/IV secretion system protein DM57_100 PF13276 DM57_100 DM57_100 PF13683 DM57_100 DM57_10005 PF00440 Bacterial regulatory proteins, tetR family DM57_10005 PF16925 DM57_10005 DM57_1001 PF13276 DM57_1001 DM57_1001 PF13683 DM57_1001 DM57_10015 PF01965 DJ-1/PfpI family DM57_1002 PF01527 Transposase DM57_10020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM57_10030 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_10040 PF01594 DM57_10040 DM57_10045 PF04355 SmpA / OmlA family DM57_10050 PF00106 short chain dehydrogenase DM57_10055 PF00155 Aminotransferase class I and II DM57_10055 PF00392 Bacterial regulatory proteins, gntR family DM57_1006 PF02401 LytB protein DM57_10060 PF12900 Pyridoxamine 5'-phosphate oxidase DM57_1007 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM57_10075 PF00027 Cyclic nucleotide-binding domain DM57_10075 PF13545 Crp-like helix-turn-helix domain DM57_1008 PF04002 RadC-like JAB domain DM57_10080 PF00501 AMP-binding enzyme DM57_10080 PF13193 AMP-binding enzyme C-terminal domain DM57_1009 PF00830 Ribosomal L28 family DM57_10095 PF02321 Outer membrane efflux protein DM57_101 PF01527 Transposase DM57_1010 PF00471 Ribosomal protein L33 DM57_10100 PF07238 PilZ domain DM57_10100 PF13641 Glycosyltransferase like family 2 DM57_1011 PF00890 FAD binding domain DM57_1011 PF02910 Fumarate reductase flavoprotein C-term DM57_1012 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DM57_1012 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DM57_1013 PF02445 Quinolinate synthetase A protein DM57_10130 PF12973 ChrR Cupin-like domain DM57_1014 PF00487 DM57_1014 DM57_1014 PF01610 DM57_1014 DM57_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_10140 PF03466 LysR substrate binding domain DM57_10145 PF00202 Aminotransferase class-III DM57_1015 PF00924 Mechanosensitive ion channel DM57_10150 PF00171 Aldehyde dehydrogenase family DM57_10155 PF13276 DM57_10155 DM57_10155 PF13683 DM57_10155 DM57_1016 PF01189 NOL1/NOP2/sun family DM57_10160 PF01527 Transposase DM57_1017 PF00551 Formyl transferase DM57_10170 PF14196 DM57_10170 DM57_1018 PF01687 Riboflavin kinase DM57_1018 PF06574 FAD synthetase DM57_10180 PF01546 Peptidase family M20/M25/M40 DM57_10185 PF02465 DM57_10185 DM57_10185 PF07195 DM57_10185 DM57_10185 PF07196 Flagellin hook IN motif DM57_1019 PF00133 tRNA synthetases class I (I, L, M and V) DM57_1019 PF06827 Zinc finger found in FPG and IleRS DM57_1019 PF08264 Anticodon-binding domain of tRNA DM57_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_10190 PF03466 LysR substrate binding domain DM57_1020 PF01252 DM57_1020 DM57_10200 PF03466 LysR substrate binding domain DM57_10205 PF00248 Aldo/keto reductase family DM57_1021 PF02441 Flavoprotein DM57_1021 PF04127 DNA / pantothenate metabolism flavoprotein DM57_10215 PF10703 Molybdenum cofactor biosynthesis protein F DM57_10215 PF17409 DM57_10215 DM57_1022 PF00692 dUTPase DM57_10220 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_10225 PF00196 Bacterial regulatory proteins, luxR family DM57_1023 PF03988 DM57_1023 DM57_10230 PF00171 Aldehyde dehydrogenase family DM57_10235 PF00202 Aminotransferase class-III DM57_10240 PF13520 Amino acid permease DM57_10245 PF11354 DM57_10245 DM57_1025 PF01527 Transposase DM57_10250 PF12833 Helix-turn-helix domain DM57_10255 PF13609 Gram-negative porin DM57_10265 PF01810 DM57_10265 DM57_1027 PF02643 Uncharacterized ACR, COG1430 DM57_10270 PF00583 Acetyltransferase (GNAT) family DM57_10275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM57_1028 PF00009 Elongation factor Tu GTP binding domain DM57_1028 PF00679 Elongation factor G C-terminus DM57_1028 PF03144 Elongation factor Tu domain 2 DM57_1028 PF03764 Elongation factor G, domain IV DM57_1028 PF14492 Elongation Factor G, domain II DM57_10280 PF12840 Helix-turn-helix domain DM57_10290 PF13609 Gram-negative porin DM57_10295 PF01272 Transcription elongation factor, GreA/GreB, C-term DM57_103 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase DM57_103 PF13450 NAD(P)-binding Rossmann-like domain DM57_10300 PF13663 DM57_10300 DM57_10305 PF00571 CBS domain DM57_1031 PF00248 Aldo/keto reductase family DM57_10310 PF00925 GTP cyclohydrolase II DM57_1032 PF00392 Bacterial regulatory proteins, gntR family DM57_1032 PF07702 UTRA domain DM57_10320 PF00765 Autoinducer synthetase DM57_10325 PF16245 DM57_10325 DM57_10330 PF00196 Bacterial regulatory proteins, luxR family DM57_10330 PF03472 Autoinducer binding domain DM57_10335 PF02308 DM57_10335 DM57_10340 PF00149 Calcineurin-like phosphoesterase DM57_10345 PF00881 Nitroreductase family DM57_1035 PF07690 Major Facilitator Superfamily DM57_10350 PF13532 2OG-Fe(II) oxygenase superfamily DM57_10355 PF01614 Bacterial transcriptional regulator DM57_10355 PF09339 IclR helix-turn-helix domain DM57_1036 PF00563 EAL domain DM57_10360 PF00355 Rieske [2Fe-2S] domain DM57_1037 PF13649 Methyltransferase domain DM57_10370 PF00355 Rieske [2Fe-2S] domain DM57_10375 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1038 PF02558 Ketopantoate reductase PanE/ApbA DM57_1038 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM57_10380 PF07883 Cupin domain DM57_10385 PF12697 Alpha/beta hydrolase family DM57_1039 PF06127 DM57_1039 DM57_10390 PF01614 Bacterial transcriptional regulator DM57_10390 PF09339 IclR helix-turn-helix domain DM57_10395 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_104 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1040 PF00027 Cyclic nucleotide-binding domain DM57_1040 PF13545 Crp-like helix-turn-helix domain DM57_10400 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_10400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_10400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_10405 PF01958 Domain of unknown function DUF108 DM57_10405 PF03447 Homoserine dehydrogenase, NAD binding domain DM57_1041 PF02417 DM57_1041 DM57_10410 PF00171 Aldehyde dehydrogenase family DM57_10415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_10420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_10420 PF14759 Reductase C-terminal DM57_10425 PF00083 Sugar (and other) transporter DM57_10430 PF03895 YadA-like C-terminal region DM57_10430 PF05658 Head domain of trimeric autotransporter adhesin DM57_10430 PF05662 Coiled stalk of trimeric autotransporter adhesin DM57_10435 PF00691 OmpA family DM57_10435 PF04355 SmpA / OmlA family DM57_10440 PF00582 Universal stress protein family DM57_10450 PF01425 Amidase DM57_10455 PF01037 AsnC family DM57_10455 PF13412 Winged helix-turn-helix DNA-binding DM57_10460 PF01053 Cys/Met metabolism PLP-dependent enzyme DM57_1047 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DM57_1047 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DM57_10475 PF00797 N-acetyltransferase DM57_1048 PF02601 DM57_1048 DM57_1048 PF13742 DM57_1048 DM57_10480 PF06475 Putative glycolipid-binding DM57_10485 PF02082 Transcriptional regulator DM57_1049 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DM57_10490 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_10495 PF13276 DM57_10495 DM57_10495 PF13683 DM57_10495 DM57_105 PF13279 Thioesterase-like superfamily DM57_1050 PF03966 Trm112p-like protein DM57_10500 PF01527 Transposase DM57_1051 PF02348 Cytidylyltransferase DM57_10510 PF07947 DM57_10510 DM57_10515 PF13379 NMT1-like family DM57_1052 PF00406 Adenylate kinase DM57_1052 PF05191 Adenylate kinase, active site lid DM57_10520 PF13411 MerR HTH family regulatory protein DM57_10525 PF13420 Acetyltransferase (GNAT) domain DM57_1053 PF05598 DM57_1053 DM57_1053 PF13751 DM57_1053 DM57_10535 PF07690 Major Facilitator Superfamily DM57_1054 PF00313 'Cold-shock' DNA-binding domain DM57_10540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_10540 PF00672 HAMP domain DM57_10540 PF02203 Tar ligand binding domain homologue DM57_1055 PF02617 ATP-dependent Clp protease adaptor protein ClpS DM57_10550 PF08378 DM57_10550 DM57_10550 PF13538 UvrD-like helicase C-terminal domain DM57_1056 PF00004 ATPase family associated with various cellular activities (AAA) DM57_1056 PF02861 Clp amino terminal domain DM57_1056 PF07724 AAA domain (Cdc48 subfamily) DM57_1056 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_10560 PF08667 BetR domain DM57_10565 PF01266 FAD dependent oxidoreductase DM57_10570 PF02254 TrkA-N domain DM57_10570 PF07885 Ion channel DM57_10575 PF00561 alpha/beta hydrolase fold DM57_1058 PF13276 DM57_1058 DM57_1058 PF13683 DM57_1058 DM57_10580 PF02627 Carboxymuconolactone decarboxylase family DM57_10585 PF02423 Ornithine cyclodeaminase/mu-crystallin family DM57_1059 PF01527 Transposase DM57_10590 PF00756 Putative esterase DM57_10595 PF10129 DM57_10595 DM57_10600 PF13609 Gram-negative porin DM57_10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_10605 PF03466 LysR substrate binding domain DM57_1061 PF00583 Acetyltransferase (GNAT) family DM57_10610 PF01476 LysM domain DM57_10610 PF01551 Peptidase family M23 DM57_10615 PF13354 Beta-lactamase enzyme family DM57_1062 PF00155 Aminotransferase class I and II DM57_10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_10625 PF03466 LysR substrate binding domain DM57_1063 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DM57_10635 PF00005 ABC transporter DM57_1064 PF00107 Zinc-binding dehydrogenase DM57_1064 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_1064 PF00550 Phosphopantetheine attachment site DM57_1064 PF00698 Acyl transferase domain DM57_1064 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_1064 PF08659 KR domain DM57_1064 PF13489 Methyltransferase domain DM57_1064 PF14765 Polyketide synthase dehydratase DM57_1064 PF16197 DM57_1064 DM57_10640 PF00005 ABC transporter DM57_10645 PF00528 Binding-protein-dependent transport system inner membrane component DM57_10645 PF12911 DM57_10645 DM57_1065 PF00884 Sulfatase DM57_10650 PF00528 Binding-protein-dependent transport system inner membrane component DM57_10655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_1066 PF00106 short chain dehydrogenase DM57_10660 PF01427 D-ala-D-ala dipeptidase DM57_1068 PF13242 HAD-hyrolase-like DM57_10685 PF05954 Phage late control gene D protein (GPD) DM57_10685 PF06715 Gp5 C-terminal repeat (3 copies) DM57_1069 PF00483 Nucleotidyl transferase DM57_10690 PF08786 Domain of unknown function (DUF1795) DM57_10695 PF03527 DM57_10695 DM57_10695 PF05488 PAAR motif DM57_10695 PF05593 DM57_10695 DM57_107 PF00150 Cellulase (glycosyl hydrolase family 5) DM57_1070 PF13580 SIS domain DM57_10705 PF00082 Subtilase family DM57_10705 PF03797 Autotransporter beta-domain DM57_10705 PF12951 DM57_10705 DM57_1071 PF00288 GHMP kinases N terminal domain DM57_1071 PF08544 GHMP kinases C terminal DM57_10710 PF13640 2OG-Fe(II) oxygenase superfamily DM57_1072 PF16363 DM57_1072 DM57_10720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_10725 PF00190 Cupin DM57_1073 PF04321 RmlD substrate binding domain DM57_10730 PF01566 DM57_10730 DM57_10735 PF05360 DM57_10735 DM57_1074 PF13276 DM57_1074 DM57_1074 PF13683 DM57_1074 DM57_10740 PF01062 DM57_10740 DM57_10745 PF00384 Molybdopterin oxidoreductase DM57_10745 PF01568 Molydopterin dinucleotide binding domain DM57_10750 PF00155 Aminotransferase class I and II DM57_10750 PF00392 Bacterial regulatory proteins, gntR family DM57_1076 PF00534 Glycosyl transferases group 1 DM57_1076 PF13946 DM57_1076 DM57_10760 PF13557 DM57_10760 DM57_10765 PF00122 E1-E2 ATPase DM57_10765 PF00689 Cation transporting ATPase, C-terminus DM57_10765 PF00690 Cation transporter/ATPase, N-terminus DM57_10765 PF00702 haloacid dehalogenase-like hydrolase DM57_10770 PF00082 Subtilase family DM57_1078 PF03567 Sulfotransferase family DM57_10780 PF12318 DM57_10780 DM57_10785 PF00732 GMC oxidoreductase DM57_10785 PF00890 FAD binding domain DM57_10785 PF05199 GMC oxidoreductase DM57_10790 PF00034 Cytochrome c DM57_10790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_10795 PF07681 DM57_10795 DM57_108 PF00196 Bacterial regulatory proteins, luxR family DM57_108 PF13426 PAS domain DM57_1080 PF00005 ABC transporter DM57_10800 PF13609 Gram-negative porin DM57_10810 PF10997 DM57_10810 DM57_10815 PF00528 Binding-protein-dependent transport system inner membrane component DM57_1082 PF01061 DM57_1082 DM57_10820 PF00528 Binding-protein-dependent transport system inner membrane component DM57_10825 PF00005 ABC transporter DM57_10830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM57_1084 PF02563 Polysaccharide biosynthesis/export protein DM57_10840 PF04828 Glutathione-dependent formaldehyde-activating enzyme DM57_10855 PF07690 Major Facilitator Superfamily DM57_1086 PF05159 DM57_1086 DM57_10865 PF06580 DM57_10865 DM57_1087 PF00483 Nucleotidyl transferase DM57_1087 PF01050 Mannose-6-phosphate isomerase DM57_10870 PF13276 DM57_10870 DM57_10870 PF13683 DM57_10870 DM57_10875 PF01527 Transposase DM57_1088 PF13230 Glutamine amidotransferases class-II DM57_10880 PF00072 Response regulator receiver domain DM57_10885 PF04397 LytTr DNA-binding domain DM57_1089 PF00924 Mechanosensitive ion channel DM57_10890 PF00199 Catalase DM57_10890 PF06628 Catalase-related immune-responsive DM57_10895 PF10119 DM57_10895 DM57_10895 PF13847 Methyltransferase domain DM57_109 PF01144 Coenzyme A transferase DM57_1090 PF09335 DM57_1090 DM57_10900 PF12833 Helix-turn-helix domain DM57_10905 PF00355 Rieske [2Fe-2S] domain DM57_1091 PF01119 DNA mismatch repair protein, C-terminal domain DM57_1091 PF08676 MutL C terminal dimerisation domain DM57_1091 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_10915 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_10915 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_1092 PF01715 IPP transferase DM57_10920 PF00550 Phosphopantetheine attachment site DM57_10925 PF00378 Enoyl-CoA hydratase/isomerase family DM57_1093 PF14534 Domain of unknown function (DUF4440) DM57_10930 PF00378 Enoyl-CoA hydratase/isomerase family DM57_1094 PF00586 AIR synthase related protein, N-terminal domain DM57_1094 PF02769 AIR synthase related protein, C-terminal domain DM57_10940 PF01610 DM57_10940 DM57_10940 PF13542 DM57_10940 DM57_10940 PF14690 DM57_10940 DM57_10945 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DM57_10945 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DM57_1095 PF00308 Bacterial dnaA protein DM57_1096 PF12710 haloacid dehalogenase-like hydrolase DM57_10965 PF00698 Acyl transferase domain DM57_1097 PF01743 Poly A polymerase head domain DM57_1097 PF12626 Polymerase A arginine-rich C-terminus DM57_1097 PF12627 Probable RNA and SrmB- binding site of polymerase A DM57_10970 PF00999 Sodium/hydrogen exchanger family DM57_10975 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_10975 PF00550 Phosphopantetheine attachment site DM57_10975 PF01212 Beta-eliminating lyase DM57_10975 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_10975 PF08659 KR domain DM57_10975 PF09924 Uncharacterized conserved protein (DUF2156) DM57_10975 PF14765 Polyketide synthase dehydratase DM57_10975 PF16197 DM57_10975 DM57_1098 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DM57_10980 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_10980 PF00550 Phosphopantetheine attachment site DM57_10980 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_10980 PF08242 Methyltransferase domain DM57_10980 PF08659 KR domain DM57_10980 PF14765 Polyketide synthase dehydratase DM57_10980 PF16197 DM57_10980 DM57_1099 PF01712 Deoxynucleoside kinase DM57_10990 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_10990 PF01212 Beta-eliminating lyase DM57_10990 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_10990 PF09924 Uncharacterized conserved protein (DUF2156) DM57_10995 PF07690 Major Facilitator Superfamily DM57_11 PF00440 Bacterial regulatory proteins, tetR family DM57_11 PF08361 MAATS-type transcriptional repressor, C-terminal region DM57_110 PF01144 Coenzyme A transferase DM57_1100 PF02548 Ketopantoate hydroxymethyltransferase DM57_11000 PF00571 CBS domain DM57_11000 PF00654 Voltage gated chloride channel DM57_11005 PF12802 MarR family DM57_1101 PF00425 chorismate binding enzyme DM57_1101 PF01063 Aminotransferase class IV DM57_11010 PF00571 CBS domain DM57_11010 PF04982 DM57_11010 DM57_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_11015 PF03466 LysR substrate binding domain DM57_1102 PF00226 DnaJ domain DM57_1102 PF00684 DnaJ central domain DM57_1102 PF01556 DnaJ C terminal domain DM57_11025 PF01699 Sodium/calcium exchanger protein DM57_1103 PF00012 Hsp70 protein DM57_11030 PF01914 DM57_11030 DM57_11035 PF02517 CAAX protease self-immunity DM57_11040 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_11045 PF12833 Helix-turn-helix domain DM57_1105 PF01025 GrpE DM57_11055 PF04542 Sigma-70 region 2 DM57_11055 PF08281 Sigma-70, region 4 DM57_1106 PF01479 S4 domain DM57_11065 PF04264 YceI-like domain DM57_1107 PF00762 Ferrochelatase DM57_11070 PF03640 DM57_11070 DM57_1108 PF01628 HrcA protein C terminal domain DM57_1108 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DM57_11080 PF04542 Sigma-70 region 2 DM57_11080 PF08281 Sigma-70, region 4 DM57_11085 PF04773 FecR protein DM57_1109 PF01513 ATP-NAD kinase DM57_11090 PF00593 TonB dependent receptor DM57_11090 PF07660 Secretin and TonB N terminus short domain DM57_11090 PF07715 TonB-dependent Receptor Plug Domain DM57_11095 PF02653 DM57_11095 DM57_111 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1110 PF02463 RecF/RecN/SMC N terminal domain DM57_1111 PF03710 Glutamate-ammonia ligase adenylyltransferase DM57_1111 PF08335 GlnD PII-uridylyltransferase DM57_11115 PF13276 DM57_11115 DM57_11115 PF13683 DM57_11115 DM57_1112 PF13116 DM57_1112 DM57_1112 PF13502 DM57_1112 DM57_11120 PF01527 Transposase DM57_1113 PF00795 Carbon-nitrogen hydrolase DM57_11130 PF00975 Thioesterase domain DM57_11135 PF07690 Major Facilitator Superfamily DM57_1114 PF01523 Putative modulator of DNA gyrase DM57_11140 PF03621 MbtH-like protein DM57_11145 PF00501 AMP-binding enzyme DM57_11145 PF00550 Phosphopantetheine attachment site DM57_11145 PF00668 Condensation domain DM57_11145 PF13193 AMP-binding enzyme C-terminal domain DM57_1115 PF00793 DAHP synthetase I family DM57_11150 PF11445 DM57_11150 DM57_11155 PF00691 OmpA family DM57_11160 PF05650 DM57_11160 DM57_11165 PF11828 DM57_11165 DM57_11170 PF10084 DM57_11170 DM57_11175 PF10462 Peptidase M66 DM57_1118 PF00572 Ribosomal protein L13 DM57_11180 PF00465 Iron-containing alcohol dehydrogenase DM57_11185 PF00107 Zinc-binding dehydrogenase DM57_11185 PF16884 DM57_11185 DM57_1119 PF00380 Ribosomal protein S9/S16 DM57_11195 PF02515 CoA-transferase family III DM57_112 PF01522 Polysaccharide deacetylase DM57_1120 PF01521 Iron-sulphur cluster biosynthesis DM57_11200 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_11205 PF03466 LysR substrate binding domain DM57_1121 PF12833 Helix-turn-helix domain DM57_1121 PF12852 Cupin DM57_1122 PF00043 Glutathione S-transferase, C-terminal domain DM57_1122 PF02798 Glutathione S-transferase, N-terminal domain DM57_11220 PF03466 LysR substrate binding domain DM57_11225 PF00083 Sugar (and other) transporter DM57_1123 PF00043 Glutathione S-transferase, C-terminal domain DM57_1123 PF02798 Glutathione S-transferase, N-terminal domain DM57_11230 PF01546 Peptidase family M20/M25/M40 DM57_11230 PF07687 Peptidase dimerisation domain DM57_11235 PF00850 Histone deacetylase domain DM57_1124 PF03702 Uncharacterised protein family (UPF0075) DM57_11245 PF01227 GTP cyclohydrolase I DM57_1125 PF00579 tRNA synthetases class I (W and Y) DM57_1125 PF01479 S4 domain DM57_11250 PF13379 NMT1-like family DM57_11255 PF00072 Response regulator receiver domain DM57_11255 PF03861 ANTAR domain DM57_1126 PF02580 D-Tyr-tRNA(Tyr) deacylase DM57_11260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_11265 PF07690 Major Facilitator Superfamily DM57_1127 PF00300 Histidine phosphatase superfamily (branch 1) DM57_11270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DM57_11270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DM57_11270 PF04324 BFD-like [2Fe-2S] binding domain DM57_11270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_11275 PF13806 Rieske-like [2Fe-2S] domain DM57_1128 PF08857 Putative ParB-like nuclease DM57_11280 PF00175 Oxidoreductase NAD-binding domain DM57_11280 PF00258 Flavodoxin DM57_11280 PF00384 Molybdopterin oxidoreductase DM57_11280 PF00667 FAD binding domain DM57_11280 PF01568 Molydopterin dinucleotide binding domain DM57_11280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM57_1129 PF09995 DM57_1129 DM57_11290 PF00905 Penicillin binding protein transpeptidase domain DM57_11290 PF03717 Penicillin-binding Protein dimerisation domain DM57_11295 PF00768 D-alanyl-D-alanine carboxypeptidase DM57_113 PF07366 SnoaL-like polyketide cyclase DM57_1130 PF05491 Holliday junction DNA helicase ruvB C-terminus DM57_1130 PF05496 Holliday junction DNA helicase ruvB N-terminus DM57_11305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM57_11305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM57_1131 PF01330 RuvA N terminal domain DM57_1131 PF07499 RuvA, C-terminal domain DM57_1131 PF14520 Helix-hairpin-helix domain DM57_11310 PF12833 Helix-turn-helix domain DM57_11315 PF00005 ABC transporter DM57_11315 PF08402 TOBE domain DM57_1132 PF02075 Crossover junction endodeoxyribonuclease RuvC DM57_11320 PF00107 Zinc-binding dehydrogenase DM57_11320 PF08240 Alcohol dehydrogenase GroES-like domain DM57_11325 PF00528 Binding-protein-dependent transport system inner membrane component DM57_1133 PF01808 AICARFT/IMPCHase bienzyme DM57_1133 PF02142 MGS-like domain DM57_11330 PF00528 Binding-protein-dependent transport system inner membrane component DM57_11335 PF01547 Bacterial extracellular solute-binding protein DM57_1134 PF02954 Bacterial regulatory protein, Fis family DM57_11340 PF10517 DM57_11340 DM57_11345 PF07690 Major Facilitator Superfamily DM57_1135 PF01207 Dihydrouridine synthase (Dus) DM57_11350 PF00455 DM57_11350 DM57_11350 PF08220 DeoR-like helix-turn-helix domain DM57_11355 PF01544 CorA-like Mg2+ transporter protein DM57_1136 PF01494 FAD binding domain DM57_11360 PF06983 3-demethylubiquinone-9 3-methyltransferase DM57_1137 PF00557 Metallopeptidase family M24 DM57_1137 PF05195 Aminopeptidase P, N-terminal domain DM57_11375 PF13620 Carboxypeptidase regulatory-like domain DM57_1138 PF13410 Glutathione S-transferase, C-terminal domain DM57_1138 PF13417 Glutathione S-transferase, N-terminal domain DM57_11380 PF10118 DM57_11380 DM57_1139 PF05598 DM57_1139 DM57_1139 PF13751 DM57_1139 DM57_11390 PF00999 Sodium/hydrogen exchanger family DM57_11390 PF02254 TrkA-N domain DM57_11395 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_114 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_114 PF03466 LysR substrate binding domain DM57_1140 PF01645 Conserved region in glutamate synthase DM57_11400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DM57_11405 PF00905 Penicillin binding protein transpeptidase domain DM57_11405 PF03717 Penicillin-binding Protein dimerisation domain DM57_1141 PF03054 tRNA methyl transferase DM57_11410 PF01527 Transposase DM57_1142 PF00293 NUDIX domain DM57_11420 PF05344 DM57_11420 DM57_1143 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DM57_1143 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DM57_11435 PF00589 Phage integrase family DM57_11435 PF12482 DM57_11435 DM57_1144 PF12769 Domain of unknown function (DUF3814) DM57_11440 PF13489 Methyltransferase domain DM57_11445 PF00400 WD domain, G-beta repeat DM57_1145 PF02233 NAD(P) transhydrogenase beta subunit DM57_11450 PF00925 GTP cyclohydrolase II DM57_11455 PF02321 Outer membrane efflux protein DM57_1146 PF08279 HTH domain DM57_1146 PF13280 DM57_1146 DM57_11460 PF00873 AcrB/AcrD/AcrF family DM57_11465 PF16576 DM57_11465 DM57_11470 PF12802 MarR family DM57_11475 PF07969 Amidohydrolase family DM57_1148 PF01170 Putative RNA methylase family UPF0020 DM57_1148 PF02926 THUMP domain DM57_11485 PF00004 ATPase family associated with various cellular activities (AAA) DM57_11485 PF01434 Peptidase family M41 DM57_1149 PF10136 DM57_1149 DM57_11490 PF01694 Rhomboid family DM57_11500 PF13520 Amino acid permease DM57_11505 PF04073 Aminoacyl-tRNA editing domain DM57_1151 PF03886 Protein of unknown function (DUF330) DM57_11510 PF04008 Adenosine specific kinase DM57_1152 PF02470 DM57_1152 DM57_11525 PF02321 Outer membrane efflux protein DM57_1153 PF04403 DM57_1153 DM57_11530 PF16576 DM57_11530 DM57_11535 PF00873 AcrB/AcrD/AcrF family DM57_1154 PF04403 DM57_1154 DM57_11540 PF00072 Response regulator receiver domain DM57_11540 PF00486 Transcriptional regulatory protein, C terminal DM57_11545 PF00512 His Kinase A (phospho-acceptor) domain DM57_11545 PF00672 HAMP domain DM57_11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_1155 PF01292 Prokaryotic cytochrome b561 DM57_11550 PF13663 DM57_11550 DM57_11555 PF01527 Transposase DM57_1156 PF04264 YceI-like domain DM57_11560 PF13276 DM57_11560 DM57_11560 PF13683 DM57_11560 DM57_1157 PF04264 YceI-like domain DM57_11570 PF03895 YadA-like C-terminal region DM57_11570 PF05662 Coiled stalk of trimeric autotransporter adhesin DM57_11575 PF10933 DM57_11575 DM57_11580 PF10933 DM57_11580 DM57_1159 PF02355 Protein export membrane protein DM57_1159 PF07549 SecD/SecF GG Motif DM57_11595 PF10933 DM57_11595 DM57_116 PF12697 Alpha/beta hydrolase family DM57_1160 PF02355 Protein export membrane protein DM57_1160 PF07549 SecD/SecF GG Motif DM57_1160 PF13721 SecD export protein N-terminal TM region DM57_1161 PF02699 Preprotein translocase subunit DM57_11610 PF00378 Enoyl-CoA hydratase/isomerase family DM57_11615 PF01039 Carboxyl transferase domain DM57_1162 PF01702 Queuine tRNA-ribosyltransferase DM57_11620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_11620 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_11620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_11625 PF00440 Bacterial regulatory proteins, tetR family DM57_11625 PF08359 YsiA-like protein, C-terminal region DM57_1163 PF02547 Queuosine biosynthesis protein DM57_11630 PF01042 Endoribonuclease L-PSP DM57_11635 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM57_1164 PF00270 DEAD/DEAH box helicase DM57_1164 PF00271 Helicase conserved C-terminal domain DM57_1164 PF17191 DM57_1164 DM57_11640 PF00034 Cytochrome c DM57_11640 PF00394 Multicopper oxidase DM57_11640 PF07732 Multicopper oxidase DM57_11645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DM57_11645 PF00355 Rieske [2Fe-2S] domain DM57_11645 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM57_11645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DM57_1165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1165 PF03466 LysR substrate binding domain DM57_11650 PF11805 DM57_11650 DM57_11655 PF13621 Cupin-like domain DM57_1167 PF00141 Peroxidase DM57_11670 PF11199 DM57_11670 DM57_11675 PF00083 Sugar (and other) transporter DM57_11680 PF13302 Acetyltransferase (GNAT) domain DM57_11685 PF00512 His Kinase A (phospho-acceptor) domain DM57_11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_11690 PF00072 Response regulator receiver domain DM57_11690 PF00486 Transcriptional regulatory protein, C terminal DM57_11695 PF13670 DM57_11695 DM57_117 PF01042 Endoribonuclease L-PSP DM57_1170 PF01638 HxlR-like helix-turn-helix DM57_11700 PF10029 DM57_11700 DM57_11705 PF00175 Oxidoreductase NAD-binding domain DM57_11705 PF00258 Flavodoxin DM57_11705 PF00970 Oxidoreductase FAD-binding domain DM57_11705 PF03929 DM57_11705 DM57_1171 PF01040 UbiA prenyltransferase family DM57_11710 PF02424 ApbE family DM57_11715 PF00171 Aldehyde dehydrogenase family DM57_1172 PF13238 AAA domain DM57_11720 PF00155 Aminotransferase class I and II DM57_11725 PF07063 Domain of unknown function (DUF1338) DM57_1173 PF06299 DM57_1173 DM57_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_11730 PF03466 LysR substrate binding domain DM57_11735 PF01266 FAD dependent oxidoreductase DM57_1174 PF00392 Bacterial regulatory proteins, gntR family DM57_1174 PF07702 UTRA domain DM57_11740 PF00440 Bacterial regulatory proteins, tetR family DM57_11745 PF13091 PLD-like domain DM57_1175 PF06754 DM57_1175 DM57_11750 PF00455 DM57_11750 DM57_11750 PF08220 DeoR-like helix-turn-helix domain DM57_11755 PF07690 Major Facilitator Superfamily DM57_1176 PF05845 Bacterial phosphonate metabolism protein (PhnH) DM57_11760 PF01232 Mannitol dehydrogenase Rossmann domain DM57_11760 PF08125 Mannitol dehydrogenase C-terminal domain DM57_11765 PF00392 Bacterial regulatory proteins, gntR family DM57_11765 PF07729 FCD domain DM57_1177 PF05861 DM57_1177 DM57_11770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM57_11770 PF13378 Enolase C-terminal domain-like DM57_11775 PF00107 Zinc-binding dehydrogenase DM57_11775 PF08240 Alcohol dehydrogenase GroES-like domain DM57_1178 PF06007 DM57_1178 DM57_11785 PF00892 EamA-like transporter family DM57_1179 PF00005 ABC transporter DM57_11790 PF02540 NAD synthase DM57_11795 PF02796 Helix-turn-helix domain of resolvase DM57_118 PF02824 TGS domain DM57_118 PF04607 Region found in RelA / SpoT proteins DM57_118 PF13291 ACT domain DM57_118 PF13328 HD domain DM57_1180 PF00005 ABC transporter DM57_11800 PF06792 Uncharacterised protein family (UPF0261) DM57_11805 PF09370 TIM-barrel signal transduction protein DM57_11810 PF10604 Polyketide cyclase / dehydrase and lipid transport DM57_11815 PF00394 Multicopper oxidase DM57_11815 PF07732 Multicopper oxidase DM57_11815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_1182 PF00005 ABC transporter DM57_11820 PF03781 Sulfatase-modifying factor enzyme 1 DM57_11825 PF02630 SCO1/SenC DM57_11830 PF01471 Putative peptidoglycan binding domain DM57_11830 PF01510 N-acetylmuramoyl-L-alanine amidase DM57_11845 PF03895 YadA-like C-terminal region DM57_11845 PF05658 Head domain of trimeric autotransporter adhesin DM57_11845 PF05662 Coiled stalk of trimeric autotransporter adhesin DM57_1185 PF00528 Binding-protein-dependent transport system inner membrane component DM57_11855 PF06812 DM57_11855 DM57_11855 PF16989 DM57_11855 DM57_1186 PF03807 NADP oxidoreductase coenzyme F420-dependent DM57_1186 PF14748 Pyrroline-5-carboxylate reductase dimerisation DM57_11860 PF00072 Response regulator receiver domain DM57_11860 PF00486 Transcriptional regulatory protein, C terminal DM57_11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_11865 PF05231 DM57_11865 DM57_1187 PF01168 Alanine racemase, N-terminal domain DM57_11870 PF05591 DM57_11870 DM57_11875 PF05943 DM57_11875 DM57_1188 PF02754 DM57_1188 DM57_1188 PF13183 4Fe-4S dicluster domain DM57_11880 PF05638 Protein of unknown function (DUF796) DM57_11885 PF04965 Gene 25-like lysozyme DM57_1189 PF01565 FAD binding domain DM57_11890 PF05947 DM57_11890 DM57_11895 PF06996 DM57_11895 DM57_1190 PF01565 FAD binding domain DM57_1190 PF02913 FAD linked oxidases, C-terminal domain DM57_11900 PF00004 ATPase family associated with various cellular activities (AAA) DM57_11900 PF02861 Clp amino terminal domain DM57_11900 PF07724 AAA domain (Cdc48 subfamily) DM57_11900 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_11905 PF05954 Phage late control gene D protein (GPD) DM57_1191 PF01565 FAD binding domain DM57_1191 PF02913 FAD linked oxidases, C-terminal domain DM57_11910 PF00805 Pentapeptide repeats (8 copies) DM57_11910 PF09937 DM57_11910 DM57_11910 PF13599 Pentapeptide repeats (9 copies) DM57_11915 PF00805 Pentapeptide repeats (8 copies) DM57_11915 PF13599 Pentapeptide repeats (9 copies) DM57_1192 PF01923 Cobalamin adenosyltransferase DM57_11920 PF12059 DM57_11920 DM57_11925 PF13665 DM57_11925 DM57_1193 PF00042 Globin DM57_1193 PF00175 Oxidoreductase NAD-binding domain DM57_11930 PF12790 Type VI secretion lipoprotein DM57_11935 PF05936 DM57_11935 DM57_11940 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) DM57_11945 PF14331 DM57_11945 DM57_11950 PF13205 Bacterial Ig-like domain DM57_1196 PF02566 OsmC-like protein DM57_11960 PF01227 GTP cyclohydrolase I DM57_11965 PF01527 Transposase DM57_1197 PF11227 DM57_1197 DM57_11970 PF13276 DM57_11970 DM57_11970 PF13683 DM57_11970 DM57_11975 PF10118 DM57_11975 DM57_1198 PF01979 Amidohydrolase family DM57_11985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_11985 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DM57_1199 PF13230 Glutamine amidotransferases class-II DM57_11990 PF00816 H-NS histone family DM57_11995 PF13560 Helix-turn-helix domain DM57_12 PF00529 HlyD family secretion protein DM57_12 PF16576 DM57_12 DM57_120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM57_120 PF02824 TGS domain DM57_120 PF03129 Anticodon binding domain DM57_120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM57_12000 PF00324 Amino acid permease DM57_1201 PF00011 Hsp20/alpha crystallin family DM57_12015 PF00106 short chain dehydrogenase DM57_1202 PF00011 Hsp20/alpha crystallin family DM57_12020 PF07690 Major Facilitator Superfamily DM57_12025 PF09335 DM57_12025 DM57_1203 PF00166 Chaperonin 10 Kd subunit DM57_12030 PF00107 Zinc-binding dehydrogenase DM57_12030 PF08240 Alcohol dehydrogenase GroES-like domain DM57_12035 PF00582 Universal stress protein family DM57_12040 PF00582 Universal stress protein family DM57_12045 PF00582 Universal stress protein family DM57_12050 PF00582 Universal stress protein family DM57_12055 PF00072 Response regulator receiver domain DM57_12055 PF00196 Bacterial regulatory proteins, luxR family DM57_1206 PF00005 ABC transporter DM57_12065 PF07369 Protein of unknown function (DUF1488) DM57_1207 PF00528 Binding-protein-dependent transport system inner membrane component DM57_12075 PF11177 DM57_12075 DM57_1208 PF00528 Binding-protein-dependent transport system inner membrane component DM57_12080 PF01381 Helix-turn-helix DM57_12080 PF07883 Cupin domain DM57_12085 PF01494 FAD binding domain DM57_1209 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_12090 PF13663 DM57_12090 DM57_121 PF00707 Translation initiation factor IF-3, C-terminal domain DM57_121 PF05198 Translation initiation factor IF-3, N-terminal domain DM57_12100 PF01752 Collagenase DM57_12100 PF08453 Peptidase family M9 N-terminal DM57_12105 PF00266 Aminotransferase class-V DM57_12110 PF08123 Histone methylation protein DOT1 DM57_12115 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_1212 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DM57_1212 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DM57_12125 PF11583 P-aminobenzoate N-oxygenase AurF DM57_1213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1213 PF03466 LysR substrate binding domain DM57_12130 PF13578 Methyltransferase domain DM57_1214 PF07690 Major Facilitator Superfamily DM57_12140 PF13772 AIG2-like family DM57_1215 PF00206 Lyase DM57_1215 PF08328 Adenylosuccinate lyase C-terminal DM57_1216 PF01202 Shikimate kinase DM57_12160 PF00207 Alpha-2-macroglobulin family DM57_12160 PF01835 MG2 domain DM57_12160 PF07703 Alpha-2-macroglobulin family N-terminal region DM57_12160 PF11974 Alpha-2-macroglobulin MG1 domain DM57_12165 PF00905 Penicillin binding protein transpeptidase domain DM57_12165 PF00912 Transglycosylase DM57_12165 PF06832 DM57_12165 DM57_1217 PF02447 DM57_1217 DM57_12170 PF04509 CheC-like family DM57_12175 PF00072 Response regulator receiver domain DM57_1218 PF01081 KDPG and KHG aldolase DM57_12180 PF00512 His Kinase A (phospho-acceptor) domain DM57_12180 PF00989 PAS fold DM57_12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_1219 PF00920 Dehydratase family DM57_122 PF01632 Ribosomal protein L35 DM57_1220 PF01380 SIS domain DM57_1220 PF01418 Helix-turn-helix domain, rpiR family DM57_12200 PF13640 2OG-Fe(II) oxygenase superfamily DM57_12205 PF13302 Acetyltransferase (GNAT) domain DM57_1221 PF03653 DM57_1221 DM57_12210 PF04343 DM57_12210 DM57_12215 PF00155 Aminotransferase class I and II DM57_1222 PF00171 Aldehyde dehydrogenase family DM57_12220 PF00324 Amino acid permease DM57_12225 PF01037 AsnC family DM57_12225 PF13404 AsnC-type helix-turn-helix domain DM57_1223 PF06144 DNA polymerase III, delta subunit DM57_1223 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DM57_12230 PF00563 EAL domain DM57_12230 PF00990 GGDEF domain DM57_12230 PF03707 DM57_12230 DM57_1224 PF04390 Lipopolysaccharide-assembly DM57_12245 PF03006 DM57_12245 DM57_1225 PF00133 tRNA synthetases class I (I, L, M and V) DM57_1225 PF08264 Anticodon-binding domain of tRNA DM57_1225 PF09334 tRNA synthetases class I (M) DM57_1225 PF13603 Leucyl-tRNA synthetase, Domain 2 DM57_12250 PF13458 Periplasmic binding protein DM57_12255 PF14539 Domain of unknown function (DUF4442) DM57_1226 PF02472 Biopolymer transport protein ExbD/TolR DM57_12260 PF00440 Bacterial regulatory proteins, tetR family DM57_12265 PF00563 EAL domain DM57_1227 PF01618 DM57_1227 DM57_12275 PF01614 Bacterial transcriptional regulator DM57_12275 PF09339 IclR helix-turn-helix domain DM57_1228 PF01113 Dihydrodipicolinate reductase, N-terminus DM57_1228 PF05173 Dihydrodipicolinate reductase, C-terminus DM57_12280 PF00816 H-NS histone family DM57_12285 PF03895 YadA-like C-terminal region DM57_12285 PF05658 Head domain of trimeric autotransporter adhesin DM57_12285 PF05662 Coiled stalk of trimeric autotransporter adhesin DM57_1229 PF04355 SmpA / OmlA family DM57_123 PF00453 Ribosomal protein L20 DM57_1230 PF01475 Ferric uptake regulator family DM57_12310 PF01527 Transposase DM57_12315 PF13276 DM57_12315 DM57_12315 PF13683 DM57_12315 DM57_12320 PF05336 Domain of unknown function (DUF718) DM57_12325 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1233 PF03561 Allantoicase repeat DM57_12330 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_12335 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1234 PF00375 Sodium:dicarboxylate symporter family DM57_12340 PF04909 Amidohydrolase DM57_12345 PF04295 DM57_12345 DM57_1235 PF00392 Bacterial regulatory proteins, gntR family DM57_1235 PF07729 FCD domain DM57_12350 PF08666 SAF domain DM57_12355 PF02653 DM57_12355 DM57_1236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1236 PF03466 LysR substrate binding domain DM57_12360 PF00005 ABC transporter DM57_12365 PF13407 Periplasmic binding protein domain DM57_1237 PF00484 Carbonic anhydrase DM57_12370 PF01614 Bacterial transcriptional regulator DM57_12370 PF09339 IclR helix-turn-helix domain DM57_12375 PF07519 Tannase and feruloyl esterase DM57_1238 PF02560 Cyanate lyase C-terminal domain DM57_12380 PF13609 Gram-negative porin DM57_12385 PF07690 Major Facilitator Superfamily DM57_1239 PF07690 Major Facilitator Superfamily DM57_12395 PF00171 Aldehyde dehydrogenase family DM57_124 PF01409 tRNA synthetases class II core domain (F) DM57_124 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DM57_1240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DM57_1240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DM57_12400 PF00378 Enoyl-CoA hydratase/isomerase family DM57_1241 PF00456 Transketolase, thiamine diphosphate binding domain DM57_1241 PF02779 Transketolase, pyrimidine binding domain DM57_1241 PF02780 Transketolase, C-terminal domain DM57_12410 PF08818 Domain of unknown function (DU1801) DM57_12415 PF05899 Protein of unknown function (DUF861) DM57_1242 PF01564 Spermine/spermidine synthase DM57_12425 PF08450 SMP-30/Gluconolaconase/LRE-like region DM57_1243 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_12435 PF03466 LysR substrate binding domain DM57_1244 PF04452 RNA methyltransferase DM57_12440 PF01047 MarR family DM57_1245 PF01337 Barstar (barnase inhibitor) DM57_1246 PF00545 ribonuclease DM57_12460 PF00072 Response regulator receiver domain DM57_12460 PF00196 Bacterial regulatory proteins, luxR family DM57_1247 PF00390 Malic enzyme, N-terminal domain DM57_1247 PF01515 Phosphate acetyl/butaryl transferase DM57_1247 PF03949 Malic enzyme, NAD binding domain DM57_1247 PF12434 DM57_1247 DM57_12475 PF04185 Phosphoesterase family DM57_1248 PF00586 AIR synthase related protein, N-terminal domain DM57_1248 PF02769 AIR synthase related protein, C-terminal domain DM57_12480 PF03150 Di-haem cytochrome c peroxidase DM57_1249 PF04608 Phosphatidylglycerophosphatase A DM57_12490 PF00654 Voltage gated chloride channel DM57_12495 PF00392 Bacterial regulatory proteins, gntR family DM57_12495 PF07729 FCD domain DM57_125 PF01588 Putative tRNA binding domain DM57_125 PF03147 Ferredoxin-fold anticodon binding domain DM57_125 PF03483 B3/4 domain DM57_125 PF03484 tRNA synthetase B5 domain DM57_1250 PF02464 Competence-damaged protein DM57_12500 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_12505 PF05853 Prokaryotic protein of unknown function (DUF849) DM57_1251 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DM57_12515 PF07690 Major Facilitator Superfamily DM57_1252 PF01263 Aldose 1-epimerase DM57_12520 PF07969 Amidohydrolase family DM57_12525 PF07905 DM57_12525 DM57_12525 PF13556 PucR C-terminal helix-turn-helix domain DM57_1253 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_12530 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DM57_12535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_1254 PF02653 DM57_1254 DM57_12540 PF13609 Gram-negative porin DM57_1255 PF00005 ABC transporter DM57_12550 PF13663 DM57_12550 DM57_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_12555 PF03466 LysR substrate binding domain DM57_1256 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DM57_12560 PF04632 DM57_12560 DM57_1257 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_12575 PF03576 Peptidase family S58 DM57_1258 PF01081 KDPG and KHG aldolase DM57_12580 PF13520 Amino acid permease DM57_12585 PF00196 Bacterial regulatory proteins, luxR family DM57_1259 PF05035 2-keto-3-deoxy-galactonokinase DM57_12590 PF03640 DM57_12590 DM57_12595 PF13609 Gram-negative porin DM57_126 PF00216 Bacterial DNA-binding protein DM57_1260 PF01614 Bacterial transcriptional regulator DM57_1260 PF09339 IclR helix-turn-helix domain DM57_12600 PF03583 Secretory lipase DM57_12605 PF13276 DM57_12605 DM57_12605 PF13683 DM57_12605 DM57_12610 PF01527 Transposase DM57_1262 PF00450 Serine carboxypeptidase DM57_12620 PF07883 Cupin domain DM57_1263 PF00912 Transglycosylase DM57_12630 PF00392 Bacterial regulatory proteins, gntR family DM57_12630 PF07729 FCD domain DM57_12635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM57_12635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM57_1264 PF01488 Shikimate / quinate 5-dehydrogenase DM57_1264 PF08501 Shikimate dehydrogenase substrate binding domain DM57_12640 PF07005 Protein of unknown function, DUF1537 DM57_12640 PF17042 DM57_12640 DM57_12645 PF00596 Class II Aldolase and Adducin N-terminal domain DM57_1265 PF00773 RNB domain DM57_12650 PF07690 Major Facilitator Superfamily DM57_12655 PF01261 Xylose isomerase-like TIM barrel DM57_1266 PF05728 Uncharacterised protein family (UPF0227) DM57_12660 PF01370 NAD dependent epimerase/dehydratase family DM57_12665 PF05118 Aspartyl/Asparaginyl beta-hydroxylase DM57_1267 PF01225 Mur ligase family, catalytic domain DM57_1267 PF02875 Mur ligase family, glutamate ligase domain DM57_1267 PF08245 Mur ligase middle domain DM57_12670 PF05118 Aspartyl/Asparaginyl beta-hydroxylase DM57_12680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DM57_12685 PF01965 DJ-1/PfpI family DM57_12685 PF12833 Helix-turn-helix domain DM57_1269 PF08534 Redoxin DM57_12690 PF00528 Binding-protein-dependent transport system inner membrane component DM57_12695 PF00005 ABC transporter DM57_12695 PF00571 CBS domain DM57_127 PF13411 MerR HTH family regulatory protein DM57_1270 PF01220 Dehydroquinase class II DM57_12700 PF03358 NADPH-dependent FMN reductase DM57_1271 PF00364 Biotin-requiring enzyme DM57_12715 PF12840 Helix-turn-helix domain DM57_1272 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DM57_1272 PF02785 Biotin carboxylase C-terminal domain DM57_1272 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM57_12725 PF01451 Low molecular weight phosphotyrosine protein phosphatase DM57_1273 PF06325 Ribosomal protein L11 methyltransferase (PrmA) DM57_12730 PF01758 Sodium Bile acid symporter family DM57_1274 PF11906 DM57_1274 DM57_1274 PF13719 DM57_1274 DM57_1275 PF08534 Redoxin DM57_12750 PF13683 DM57_12750 DM57_1276 PF00294 pfkB family carbohydrate kinase DM57_12760 PF00149 Calcineurin-like phosphoesterase DM57_12765 PF13276 DM57_12765 DM57_12765 PF13683 DM57_12765 DM57_1277 PF05433 DM57_1277 DM57_12770 PF01527 Transposase DM57_1278 PF07382 DM57_1278 DM57_12795 PF00378 Enoyl-CoA hydratase/isomerase family DM57_1280 PF00268 Ribonucleotide reductase, small chain DM57_12800 PF00171 Aldehyde dehydrogenase family DM57_12805 PF00108 Thiolase, N-terminal domain DM57_12805 PF02803 Thiolase, C-terminal domain DM57_1281 PF00317 Ribonucleotide reductase, all-alpha domain DM57_1281 PF02867 Ribonucleotide reductase, barrel domain DM57_1281 PF03477 ATP cone domain DM57_12810 PF00378 Enoyl-CoA hydratase/isomerase family DM57_1282 PF01510 N-acetylmuramoyl-L-alanine amidase DM57_12820 PF00501 AMP-binding enzyme DM57_12820 PF14535 AMP-binding enzyme C-terminal domain DM57_12825 PF03562 MltA specific insert domain DM57_12825 PF06725 3D domain DM57_12835 PF04379 Protein of unknown function (DUF525) DM57_1284 PF01578 DM57_1284 DM57_12840 PF00834 Ribulose-phosphate 3 epimerase family DM57_12845 PF13419 Haloacid dehalogenase-like hydrolase DM57_1285 PF00448 SRP54-type protein, GTPase domain DM57_1285 PF02881 SRP54-type protein, helical bundle domain DM57_1285 PF02978 Signal peptide binding domain DM57_12850 PF00425 chorismate binding enzyme DM57_12850 PF04715 Anthranilate synthase component I, N terminal region DM57_12855 PF00117 Glutamine amidotransferase class-I DM57_1286 PF00156 Phosphoribosyl transferase domain DM57_12860 PF00591 Glycosyl transferase family, a/b domain DM57_12860 PF02885 Glycosyl transferase family, helical bundle domain DM57_12865 PF00218 Indole-3-glycerol phosphate synthase DM57_1287 PF01914 DM57_1287 DM57_12870 PF01928 CYTH domain DM57_12875 PF03167 Uracil DNA glycosylase superfamily DM57_1288 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM57_1288 PF03129 Anticodon binding domain DM57_1288 PF04073 Aminoacyl-tRNA editing domain DM57_12880 PF02525 Flavodoxin-like fold DM57_12885 PF05299 M61 glycyl aminopeptidase DM57_12885 PF13180 PDZ domain DM57_1289 PF00293 NUDIX domain DM57_12890 PF10411 Disulfide bond isomerase protein N-terminus DM57_12890 PF13098 Thioredoxin-like domain DM57_12895 PF01494 FAD binding domain DM57_1290 PF08750 DM57_1290 DM57_1291 PF00696 Amino acid kinase family DM57_1291 PF01472 PUA domain DM57_12910 PF01926 50S ribosome-binding GTPase DM57_12910 PF06071 Protein of unknown function (DUF933) DM57_1292 PF01018 GTP1/OBG DM57_1292 PF01926 50S ribosome-binding GTPase DM57_12920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DM57_12925 PF12833 Helix-turn-helix domain DM57_1293 PF01016 Ribosomal L27 protein DM57_12930 PF00324 Amino acid permease DM57_1294 PF00829 Ribosomal prokaryotic L21 protein DM57_12940 PF03009 Glycerophosphoryl diester phosphodiesterase family DM57_12945 PF12587 DM57_12945 DM57_1295 PF00348 Polyprenyl synthetase DM57_12955 PF00005 ABC transporter DM57_12955 PF12848 ABC transporter DM57_12960 PF13419 Haloacid dehalogenase-like hydrolase DM57_12965 PF00857 Isochorismatase family DM57_12975 PF00557 Metallopeptidase family M24 DM57_12975 PF01321 Creatinase/Prolidase N-terminal domain DM57_12975 PF16188 DM57_12975 DM57_12975 PF16189 DM57_12975 DM57_1299 PF13276 DM57_1299 DM57_1299 PF13683 DM57_1299 DM57_12995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DM57_12995 PF01488 Shikimate / quinate 5-dehydrogenase DM57_12995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DM57_13 PF00873 AcrB/AcrD/AcrF family DM57_130 PF11925 DM57_130 DM57_1300 PF01527 Transposase DM57_13000 PF00472 RF-1 domain DM57_13000 PF03462 PCRF domain DM57_13005 PF05175 Methyltransferase small domain DM57_13010 PF00462 Glutaredoxin DM57_13015 PF02441 Flavoprotein DM57_13020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DM57_13025 PF13520 Amino acid permease DM57_1303 PF00571 CBS domain DM57_1303 PF01595 DM57_1303 DM57_1303 PF03471 Transporter associated domain DM57_13030 PF13276 DM57_13030 DM57_13030 PF13683 DM57_13030 DM57_13035 PF01527 Transposase DM57_1304 PF00437 Type II/IV secretion system protein DM57_13040 PF13663 DM57_13040 DM57_13045 PF07859 alpha/beta hydrolase fold DM57_1305 PF00482 Type II secretion system (T2SS), protein F DM57_13050 PF13279 Thioesterase-like superfamily DM57_13055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM57_13055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM57_1306 PF01478 Type IV leader peptidase family DM57_1306 PF06750 DM57_1306 DM57_13060 PF05853 Prokaryotic protein of unknown function (DUF849) DM57_13065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DM57_1307 PF01121 Dephospho-CoA kinase DM57_13070 PF01965 DJ-1/PfpI family DM57_13070 PF12833 Helix-turn-helix domain DM57_13075 PF02128 Fungalysin metallopeptidase (M36) DM57_13075 PF07504 Fungalysin/Thermolysin Propeptide Motif DM57_1308 PF07072 Protein of unknown function (DUF1342) DM57_13080 PF04389 Peptidase family M28 DM57_13085 PF13609 Gram-negative porin DM57_1309 PF00293 NUDIX domain DM57_13090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DM57_13095 PF00884 Sulfatase DM57_13095 PF12411 DM57_13095 DM57_1310 PF05673 Protein of unknown function (DUF815) DM57_13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13100 PF03466 LysR substrate binding domain DM57_13105 PF00551 Formyl transferase DM57_1311 PF01960 ArgJ family DM57_13110 PF13520 Amino acid permease DM57_13115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DM57_1312 PF01043 SecA preprotein cross-linking domain DM57_1312 PF02810 SEC-C motif DM57_1312 PF07516 SecA Wing and Scaffold domain DM57_1312 PF07517 SecA DEAD-like domain DM57_13120 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_13120 PF00175 Oxidoreductase NAD-binding domain DM57_13120 PF00970 Oxidoreductase FAD-binding domain DM57_13125 PF00355 Rieske [2Fe-2S] domain DM57_13125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM57_1313 PF05258 DM57_1313 DM57_13130 PF01012 Electron transfer flavoprotein domain DM57_13135 PF00766 Electron transfer flavoprotein FAD-binding domain DM57_13135 PF01012 Electron transfer flavoprotein domain DM57_1314 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DM57_13140 PF02754 DM57_13140 DM57_13140 PF11982 DM57_13140 DM57_13140 PF13237 4Fe-4S dicluster domain DM57_13145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM57_13145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_1315 PF08534 Redoxin DM57_13150 PF02830 V4R domain DM57_13155 PF01244 Membrane dipeptidase (Peptidase family M19) DM57_1316 PF00091 Tubulin/FtsZ family, GTPase domain DM57_1316 PF12327 FtsZ family, C-terminal domain DM57_13160 PF00464 Serine hydroxymethyltransferase DM57_13165 PF01965 DJ-1/PfpI family DM57_13165 PF12833 Helix-turn-helix domain DM57_1317 PF02491 SHS2 domain inserted in FTSA DM57_1317 PF14450 Cell division protein FtsA DM57_13170 PF00107 Zinc-binding dehydrogenase DM57_13170 PF08240 Alcohol dehydrogenase GroES-like domain DM57_13175 PF02435 Levansucrase/Invertase DM57_1318 PF03799 Cell division protein FtsQ DM57_1318 PF08478 POTRA domain, FtsQ-type DM57_13180 PF00251 Glycosyl hydrolases family 32 N-terminal domain DM57_13180 PF08244 Glycosyl hydrolases family 32 C terminal DM57_13185 PF00529 HlyD family secretion protein DM57_13185 PF16576 DM57_13185 DM57_1319 PF01820 D-ala D-ala ligase N-terminus DM57_1319 PF07478 D-ala D-ala ligase C-terminus DM57_13190 PF02321 Outer membrane efflux protein DM57_1320 PF01225 Mur ligase family, catalytic domain DM57_1320 PF02875 Mur ligase family, glutamate ligase domain DM57_1320 PF08245 Mur ligase middle domain DM57_13200 PF13641 Glycosyltransferase like family 2 DM57_13205 PF07690 Major Facilitator Superfamily DM57_1321 PF03033 Glycosyltransferase family 28 N-terminal domain DM57_1321 PF04101 Glycosyltransferase family 28 C-terminal domain DM57_13210 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DM57_13210 PF03033 Glycosyltransferase family 28 N-terminal domain DM57_13215 PF12697 Alpha/beta hydrolase family DM57_1322 PF01098 DM57_1322 DM57_1323 PF02875 Mur ligase family, glutamate ligase domain DM57_1323 PF08245 Mur ligase middle domain DM57_13235 PF06744 DM57_13235 DM57_13235 PF06761 DM57_13235 DM57_13235 PF14331 DM57_13235 DM57_1324 PF00953 Glycosyl transferase family 4 DM57_1324 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DM57_13240 PF00691 OmpA family DM57_13240 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) DM57_13245 PF05936 DM57_13245 DM57_1325 PF01225 Mur ligase family, catalytic domain DM57_1325 PF02875 Mur ligase family, glutamate ligase domain DM57_1325 PF08245 Mur ligase middle domain DM57_13250 PF05936 DM57_13250 DM57_13255 PF12790 Type VI secretion lipoprotein DM57_1326 PF02875 Mur ligase family, glutamate ligase domain DM57_1326 PF08245 Mur ligase middle domain DM57_13260 PF13665 DM57_13260 DM57_13265 PF12059 DM57_13265 DM57_1327 PF00905 Penicillin binding protein transpeptidase domain DM57_1327 PF03717 Penicillin-binding Protein dimerisation domain DM57_13270 PF00805 Pentapeptide repeats (8 copies) DM57_13270 PF13599 Pentapeptide repeats (9 copies) DM57_13275 PF00805 Pentapeptide repeats (8 copies) DM57_13275 PF09937 DM57_13275 DM57_13275 PF13599 Pentapeptide repeats (9 copies) DM57_1328 PF04999 DM57_1328 DM57_13280 PF05954 Phage late control gene D protein (GPD) DM57_13285 PF05954 Phage late control gene D protein (GPD) DM57_1329 PF01795 MraW methylase family DM57_13290 PF00004 ATPase family associated with various cellular activities (AAA) DM57_13290 PF07724 AAA domain (Cdc48 subfamily) DM57_13290 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_13295 PF06996 DM57_13295 DM57_1330 PF02381 MraZ protein DM57_13300 PF05947 DM57_13300 DM57_13305 PF04965 Gene 25-like lysozyme DM57_1331 PF03232 DM57_1331 DM57_13310 PF05638 Protein of unknown function (DUF796) DM57_13315 PF05943 DM57_13315 DM57_1332 PF13609 Gram-negative porin DM57_13320 PF05591 DM57_13320 DM57_13325 PF01527 Transposase DM57_1333 PF05598 DM57_1333 DM57_1333 PF13751 DM57_1333 DM57_13330 PF13276 DM57_13330 DM57_13330 PF13683 DM57_13330 DM57_13345 PF00528 Binding-protein-dependent transport system inner membrane component DM57_13350 PF13416 Bacterial extracellular solute-binding protein DM57_13355 PF00005 ABC transporter DM57_13355 PF08402 TOBE domain DM57_13360 PF00155 Aminotransferase class I and II DM57_13360 PF00392 Bacterial regulatory proteins, gntR family DM57_13365 PF03280 Proteobacterial lipase chaperone protein DM57_13370 PF00561 alpha/beta hydrolase fold DM57_13375 PF00593 TonB dependent receptor DM57_13375 PF07715 TonB-dependent Receptor Plug Domain DM57_13380 PF11162 DM57_13380 DM57_13385 PF01292 Prokaryotic cytochrome b561 DM57_13395 PF01476 LysM domain DM57_13395 PF01551 Peptidase family M23 DM57_134 PF01527 Transposase DM57_13400 PF07883 Cupin domain DM57_13405 PF13663 DM57_13405 DM57_13410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DM57_13410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM57_13415 PF06080 DM57_13415 DM57_13420 PF02146 Sir2 family DM57_13425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DM57_1343 PF13472 GDSL-like Lipase/Acylhydrolase family DM57_13430 PF13847 Methyltransferase domain DM57_1344 PF05138 Phenylacetic acid catabolic protein DM57_13445 PF13683 DM57_13445 DM57_1345 PF06243 Phenylacetic acid degradation B DM57_13450 PF05593 DM57_13450 DM57_1346 PF05138 Phenylacetic acid catabolic protein DM57_13460 PF05954 Phage late control gene D protein (GPD) DM57_13460 PF06715 Gp5 C-terminal repeat (3 copies) DM57_13465 PF00004 ATPase family associated with various cellular activities (AAA) DM57_13465 PF07724 AAA domain (Cdc48 subfamily) DM57_13465 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_1347 PF01883 Domain of unknown function DUF59 DM57_13470 PF06996 DM57_13470 DM57_13475 PF05947 DM57_13475 DM57_1348 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_1348 PF00175 Oxidoreductase NAD-binding domain DM57_1348 PF00970 Oxidoreductase FAD-binding domain DM57_13480 PF04965 Gene 25-like lysozyme DM57_13485 PF05638 Protein of unknown function (DUF796) DM57_1349 PF08874 DM57_1349 DM57_1349 PF12395 DM57_1349 DM57_13490 PF05943 DM57_13490 DM57_13495 PF05591 DM57_13495 DM57_1350 PF00440 Bacterial regulatory proteins, tetR family DM57_13500 PF06812 DM57_13500 DM57_13505 PF00069 Protein kinase domain DM57_1351 PF00583 Acetyltransferase (GNAT) family DM57_13515 PF06744 DM57_13515 DM57_13515 PF06761 DM57_13515 DM57_13515 PF14331 DM57_13515 DM57_1352 PF01037 AsnC family DM57_1352 PF13412 Winged helix-turn-helix DNA-binding DM57_13520 PF00691 OmpA family DM57_13520 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) DM57_13525 PF05936 DM57_13525 DM57_1353 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_1353 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal DM57_13530 PF12790 Type VI secretion lipoprotein DM57_13540 PF00498 FHA domain DM57_13545 PF01841 Transglutaminase-like superfamily DM57_13545 PF12969 Domain of Unknown Function with PDB structure (DUF3857) DM57_1355 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DM57_1355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_13555 PF04345 Chorismate lyase DM57_1356 PF00390 Malic enzyme, N-terminal domain DM57_1356 PF01515 Phosphate acetyl/butaryl transferase DM57_1356 PF03949 Malic enzyme, NAD binding domain DM57_13565 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1357 PF00156 Phosphoribosyl transferase domain DM57_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13570 PF03466 LysR substrate binding domain DM57_1358 PF01161 Phosphatidylethanolamine-binding protein DM57_13580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13580 PF03466 LysR substrate binding domain DM57_1359 PF03358 NADPH-dependent FMN reductase DM57_13590 PF00581 Rhodanese-like domain DM57_13590 PF01022 Bacterial regulatory protein, arsR family DM57_13595 PF00753 Metallo-beta-lactamase superfamily DM57_136 PF06804 NlpB/DapX lipoprotein DM57_1360 PF01118 Semialdehyde dehydrogenase, NAD binding domain DM57_13600 PF07690 Major Facilitator Superfamily DM57_13605 PF00266 Aminotransferase class-V DM57_1361 PF11170 DM57_1361 DM57_1362 PF11170 DM57_1362 DM57_13620 PF00083 Sugar (and other) transporter DM57_13620 PF07690 Major Facilitator Superfamily DM57_13625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13625 PF03466 LysR substrate binding domain DM57_1363 PF03922 OmpW family DM57_13630 PF01070 FMN-dependent dehydrogenase DM57_13635 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_13640 PF01614 Bacterial transcriptional regulator DM57_13640 PF09339 IclR helix-turn-helix domain DM57_13645 PF01425 Amidase DM57_1365 PF13276 DM57_1365 DM57_1365 PF13683 DM57_1365 DM57_13655 PF00583 Acetyltransferase (GNAT) family DM57_13655 PF13380 CoA binding domain DM57_13655 PF13607 Succinyl-CoA ligase like flavodoxin domain DM57_1366 PF01527 Transposase DM57_13660 PF00816 H-NS histone family DM57_1367 PF01578 DM57_1367 DM57_1368 PF05140 DM57_1368 DM57_13680 PF00158 Sigma-54 interaction domain DM57_13680 PF02954 Bacterial regulatory protein, Fis family DM57_13680 PF08448 PAS fold DM57_1369 PF00034 Cytochrome c DM57_1369 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_13695 PF00581 Rhodanese-like domain DM57_13695 PF09335 DM57_13695 DM57_137 PF01527 Transposase DM57_1370 PF01926 50S ribosome-binding GTPase DM57_13700 PF03573 outer membrane porin, OprD family DM57_13705 PF00005 ABC transporter DM57_13705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM57_1371 PF00490 Delta-aminolevulinic acid dehydratase DM57_13710 PF00005 ABC transporter DM57_13710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM57_13715 PF00528 Binding-protein-dependent transport system inner membrane component DM57_13715 PF12911 DM57_13715 DM57_1372 PF02683 DM57_1372 DM57_1372 PF11412 Disulphide bond corrector protein DsbC DM57_1372 PF13899 Thioredoxin-like DM57_13720 PF00528 Binding-protein-dependent transport system inner membrane component DM57_13725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_1373 PF03091 CutA1 divalent ion tolerance protein DM57_13730 PF01381 Helix-turn-helix DM57_13730 PF07883 Cupin domain DM57_13735 PF00854 POT family DM57_1374 PF01196 Ribosomal protein L17 DM57_13745 PF05036 Sporulation related domain DM57_13745 PF09992 Predicted periplasmic protein (DUF2233) DM57_1375 PF01000 RNA polymerase Rpb3/RpoA insert domain DM57_1375 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DM57_1375 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DM57_13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13750 PF03466 LysR substrate binding domain DM57_1376 PF00163 Ribosomal protein S4/S9 N-terminal domain DM57_1376 PF01479 S4 domain DM57_1377 PF00411 Ribosomal protein S11 DM57_13775 PF00140 Sigma-70 factor, region 1 DM57_13775 PF03979 Sigma-70 factor, region 1 DM57_13775 PF04539 Sigma-70 region 3 DM57_13775 PF04542 Sigma-70 region 2 DM57_13775 PF04545 Sigma-70, region 4 DM57_13775 PF04546 Sigma-70, non-essential region DM57_1378 PF00416 Ribosomal protein S13/S18 DM57_13785 PF01807 CHC2 zinc finger DM57_13785 PF08275 DNA primase catalytic core, N-terminal domain DM57_13785 PF10410 DnaB-helicase binding domain of primase DM57_13785 PF13662 Toprim domain DM57_1379 PF00444 Ribosomal protein L36 DM57_13790 PF09424 Yqey-like protein DM57_13795 PF01165 Ribosomal protein S21 DM57_138 PF01610 DM57_138 DM57_1380 PF01176 Translation initiation factor 1A / IF-1 DM57_13800 PF03486 HI0933-like protein DM57_13805 PF00814 Glycoprotease family DM57_1381 PF00344 SecY translocase DM57_13810 PF05598 DM57_13810 DM57_13810 PF13751 DM57_13810 DM57_13815 PF02649 Type I GTP cyclohydrolase folE2 DM57_1382 PF00828 Ribosomal protein L18e/L15 DM57_13820 PF02779 Transketolase, pyrimidine binding domain DM57_13820 PF02780 Transketolase, C-terminal domain DM57_13820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DM57_13825 PF00348 Polyprenyl synthetase DM57_1383 PF00327 Ribosomal protein L30p/L7e DM57_13830 PF02609 Exonuclease VII small subunit DM57_13835 PF00355 Rieske [2Fe-2S] domain DM57_13835 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM57_1384 PF00333 Ribosomal protein S5, N-terminal domain DM57_1384 PF03719 Ribosomal protein S5, C-terminal domain DM57_13840 PF00581 Rhodanese-like domain DM57_13845 PF01738 Dienelactone hydrolase family DM57_1385 PF00861 Ribosomal L18p/L5e family DM57_13855 PF09977 DM57_13855 DM57_1386 PF00347 Ribosomal protein L6 DM57_13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_13865 PF00476 DNA polymerase family A DM57_13865 PF01367 5'-3' exonuclease, C-terminal SAM fold DM57_13865 PF01612 3'-5' exonuclease DM57_13865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DM57_1387 PF00410 Ribosomal protein S8 DM57_13870 PF03641 Possible lysine decarboxylase DM57_1388 PF00253 Ribosomal protein S14p/S29e DM57_13880 PF04463 DM57_13880 DM57_1389 PF00281 Ribosomal protein L5 DM57_1389 PF00673 ribosomal L5P family C-terminus DM57_139 PF03992 Antibiotic biosynthesis monooxygenase DM57_1390 PF17136 DM57_1390 DM57_13900 PF01048 Phosphorylase superfamily DM57_13900 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DM57_1391 PF00238 Ribosomal protein L14p/L23e DM57_13910 PF01636 Phosphotransferase enzyme family DM57_1392 PF00366 Ribosomal protein S17 DM57_13925 PF01047 MarR family DM57_1393 PF00831 Ribosomal L29 protein DM57_13930 PF02566 OsmC-like protein DM57_13935 PF12086 DM57_13935 DM57_1394 PF00252 Ribosomal protein L16p/L10e DM57_13940 PF10503 Esterase PHB depolymerase DM57_13945 PF01569 PAP2 superfamily DM57_1395 PF00189 Ribosomal protein S3, C-terminal domain DM57_1395 PF07650 KH domain DM57_13950 PF13531 Bacterial extracellular solute-binding protein DM57_13955 PF00528 Binding-protein-dependent transport system inner membrane component DM57_1396 PF00237 Ribosomal protein L22p/L17e DM57_13960 PF00005 ABC transporter DM57_13965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13965 PF03459 TOBE domain DM57_1397 PF00203 Ribosomal protein S19 DM57_13970 PF05235 CHAD domain DM57_13975 PF14552 Tautomerase enzyme DM57_1398 PF00181 Ribosomal Proteins L2, RNA binding domain DM57_1398 PF03947 Ribosomal Proteins L2, C-terminal domain DM57_13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_13980 PF03466 LysR substrate binding domain DM57_13985 PF00892 EamA-like transporter family DM57_1399 PF00276 Ribosomal protein L23 DM57_13995 PF00571 CBS domain DM57_13995 PF01595 DM57_13995 DM57_13995 PF03471 Transporter associated domain DM57_14 PF02321 Outer membrane efflux protein DM57_1400 PF00573 Ribosomal protein L4/L1 family DM57_14000 PF02581 Thiamine monophosphate synthase/TENI DM57_14005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DM57_14005 PF11941 Domain of unknown function (DUF3459) DM57_1401 PF00297 Ribosomal protein L3 DM57_14015 PF04073 Aminoacyl-tRNA editing domain DM57_1402 PF00338 Ribosomal protein S10p/S20e DM57_14020 PF01070 FMN-dependent dehydrogenase DM57_14025 PF13551 Winged helix-turn helix DM57_14025 PF13592 DM57_14025 DM57_1403 PF00009 Elongation factor Tu GTP binding domain DM57_1403 PF03143 Elongation factor Tu C-terminal domain DM57_1403 PF03144 Elongation factor Tu domain 2 DM57_14030 PF01810 DM57_14030 DM57_14035 PF02311 AraC-like ligand binding domain DM57_14035 PF12833 Helix-turn-helix domain DM57_1404 PF00009 Elongation factor Tu GTP binding domain DM57_1404 PF00679 Elongation factor G C-terminus DM57_1404 PF03144 Elongation factor Tu domain 2 DM57_1404 PF03764 Elongation factor G, domain IV DM57_1404 PF14492 Elongation Factor G, domain II DM57_14040 PF03472 Autoinducer binding domain DM57_14045 PF13276 DM57_14045 DM57_14045 PF13683 DM57_14045 DM57_1405 PF00177 Ribosomal protein S7p/S5e DM57_14050 PF01527 Transposase DM57_14055 PF02397 DM57_14055 DM57_14055 PF13727 CoA-binding domain DM57_1406 PF00164 Ribosomal protein S12/S23 DM57_14065 PF13340 DM57_14065 DM57_1407 PF00270 DEAD/DEAH box helicase DM57_1407 PF00271 Helicase conserved C-terminal domain DM57_1407 PF00570 HRDC domain DM57_1407 PF09382 RQC domain DM57_1407 PF16124 DM57_1407 DM57_14070 PF12007 Protein of unknown function (DUF3501) DM57_14075 PF02754 DM57_14075 DM57_1408 PF01610 DM57_1408 DM57_1408 PF13542 DM57_1408 DM57_1408 PF14690 DM57_1408 DM57_14080 PF02915 Rubrerythrin DM57_14085 PF01471 Putative peptidoglycan binding domain DM57_14085 PF01510 N-acetylmuramoyl-L-alanine amidase DM57_1409 PF00623 RNA polymerase Rpb1, domain 2 DM57_1409 PF04983 RNA polymerase Rpb1, domain 3 DM57_1409 PF04997 RNA polymerase Rpb1, domain 1 DM57_1409 PF04998 RNA polymerase Rpb1, domain 5 DM57_1409 PF05000 RNA polymerase Rpb1, domain 4 DM57_14090 PF04542 Sigma-70 region 2 DM57_14090 PF08281 Sigma-70, region 4 DM57_14095 PF10604 Polyketide cyclase / dehydrase and lipid transport DM57_1410 PF00562 RNA polymerase Rpb2, domain 6 DM57_1410 PF04560 RNA polymerase Rpb2, domain 7 DM57_1410 PF04561 RNA polymerase Rpb2, domain 2 DM57_1410 PF04563 RNA polymerase beta subunit DM57_1410 PF04565 RNA polymerase Rpb2, domain 3 DM57_1410 PF10385 RNA polymerase beta subunit external 1 domain DM57_14100 PF03795 YCII-related domain DM57_14105 PF03795 YCII-related domain DM57_1411 PF00542 Ribosomal protein L7/L12 C-terminal domain DM57_1411 PF16320 DM57_1411 DM57_14110 PF03372 Endonuclease/Exonuclease/phosphatase family DM57_14115 PF05957 DM57_14115 DM57_1412 PF00466 Ribosomal protein L10 DM57_14120 PF04366 DM57_14120 DM57_14125 PF01594 DM57_14125 DM57_1413 PF00687 Ribosomal protein L1p/L10e family DM57_14135 PF00593 TonB dependent receptor DM57_14135 PF07715 TonB-dependent Receptor Plug Domain DM57_1414 PF00298 Ribosomal protein L11, RNA binding domain DM57_1414 PF03946 Ribosomal protein L11, N-terminal domain DM57_14140 PF07690 Major Facilitator Superfamily DM57_14145 PF00107 Zinc-binding dehydrogenase DM57_14145 PF16884 DM57_14145 DM57_1415 PF00467 KOW motif DM57_1415 PF02357 Transcription termination factor nusG DM57_14155 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1416 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DM57_14165 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_14170 PF00300 Histidine phosphatase superfamily (branch 1) DM57_14175 PF01636 Phosphotransferase enzyme family DM57_1418 PF00009 Elongation factor Tu GTP binding domain DM57_1418 PF03143 Elongation factor Tu C-terminal domain DM57_1418 PF03144 Elongation factor Tu domain 2 DM57_14180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_14180 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_14180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_14185 PF03466 LysR substrate binding domain DM57_14190 PF02566 OsmC-like protein DM57_14195 PF11958 Domain of unknown function (DUF3472) DM57_142 PF02698 DUF218 domain DM57_14210 PF04261 Dyp-type peroxidase family DM57_14215 PF00005 ABC transporter DM57_14215 PF00664 ABC transporter transmembrane region DM57_14220 PF01965 DJ-1/PfpI family DM57_14225 PF01965 DJ-1/PfpI family DM57_14225 PF12833 Helix-turn-helix domain DM57_1423 PF01527 Transposase DM57_14230 PF00579 tRNA synthetases class I (W and Y) DM57_1424 PF13276 DM57_1424 DM57_1424 PF13683 DM57_1424 DM57_14240 PF05433 DM57_14240 DM57_1425 PF00174 Oxidoreductase molybdopterin binding domain DM57_14250 PF02517 CAAX protease self-immunity DM57_14255 PF00654 Voltage gated chloride channel DM57_1426 PF01794 DM57_1426 DM57_14260 PF00702 haloacid dehalogenase-like hydrolase DM57_14265 PF00072 Response regulator receiver domain DM57_14265 PF01339 CheB methylesterase DM57_1427 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DM57_1427 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DM57_14270 PF00072 Response regulator receiver domain DM57_14270 PF01584 CheW-like domain DM57_14270 PF01627 Hpt domain DM57_14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_14275 PF01584 CheW-like domain DM57_1428 PF13627 DM57_1428 DM57_14280 PF00515 Tetratricopeptide repeat DM57_14280 PF01739 CheR methyltransferase, SAM binding domain DM57_14285 PF01584 CheW-like domain DM57_1429 PF01491 Frataxin-like domain DM57_14290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_14290 PF00672 HAMP domain DM57_14290 PF12729 DM57_14290 DM57_14295 PF00072 Response regulator receiver domain DM57_14295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_14300 PF01575 MaoC like domain DM57_1431 PF00905 Penicillin binding protein transpeptidase domain DM57_1431 PF00912 Transglycosylase DM57_1431 PF17092 DM57_1431 DM57_14310 PF00171 Aldehyde dehydrogenase family DM57_14315 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_14315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_14315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_1432 PF11104 Type IV pilus assembly protein PilM; DM57_14320 PF00999 Sodium/hydrogen exchanger family DM57_14330 PF13673 Acetyltransferase (GNAT) domain DM57_14340 PF13091 PLD-like domain DM57_14345 PF01230 HIT domain DM57_1435 PF00263 DM57_1435 DM57_1435 PF03958 Bacterial type II/III secretion system short domain DM57_1435 PF07660 Secretin and TonB N terminus short domain DM57_14350 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_14350 PF14759 Reductase C-terminal DM57_14355 PF00355 Rieske [2Fe-2S] domain DM57_1436 PF01202 Shikimate kinase DM57_14360 PF00866 Ring hydroxylating beta subunit DM57_14365 PF00355 Rieske [2Fe-2S] domain DM57_14365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM57_1437 PF01761 3-dehydroquinate synthase DM57_14370 PF12833 Helix-turn-helix domain DM57_14370 PF14525 DM57_14370 DM57_14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_14375 PF03466 LysR substrate binding domain DM57_1438 PF01966 HD domain DM57_1438 PF13286 Phosphohydrolase-associated domain DM57_14380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM57_14380 PF13378 Enolase C-terminal domain-like DM57_14385 PF00775 Dioxygenase DM57_14385 PF04444 Catechol dioxygenase N terminus DM57_1439 PF13416 Bacterial extracellular solute-binding protein DM57_14390 PF02426 Muconolactone delta-isomerase DM57_14395 PF03626 DM57_14395 DM57_1440 PF00528 Binding-protein-dependent transport system inner membrane component DM57_14400 PF00510 Cytochrome c oxidase subunit III DM57_14405 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM57_1441 PF00528 Binding-protein-dependent transport system inner membrane component DM57_14410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM57_14410 PF06481 COX Aromatic Rich Motif DM57_1442 PF00005 ABC transporter DM57_1442 PF08402 TOBE domain DM57_14420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM57_14420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_14425 PF12625 DM57_14425 DM57_14425 PF12833 Helix-turn-helix domain DM57_1443 PF03009 Glycerophosphoryl diester phosphodiesterase family DM57_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_14435 PF03466 LysR substrate binding domain DM57_1444 PF03922 OmpW family DM57_14440 PF00355 Rieske [2Fe-2S] domain DM57_14440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM57_14445 PF00866 Ring hydroxylating beta subunit DM57_1445 PF01797 Transposase IS200 like DM57_14450 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_14450 PF00175 Oxidoreductase NAD-binding domain DM57_14450 PF00970 Oxidoreductase FAD-binding domain DM57_14455 PF00106 short chain dehydrogenase DM57_1446 PF00310 Glutamine amidotransferases class-II DM57_1446 PF01493 GXGXG motif DM57_1446 PF01645 Conserved region in glutamate synthase DM57_1446 PF04898 Glutamate synthase central domain DM57_14460 PF07859 alpha/beta hydrolase fold DM57_14465 PF13463 Winged helix DNA-binding domain DM57_1447 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_1447 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DM57_14470 PF00857 Isochorismatase family DM57_14475 PF13515 DM57_14475 DM57_1448 PF01235 DM57_1448 DM57_14485 PF02012 BNR/Asp-box repeat DM57_14485 PF13088 BNR repeat-like domain DM57_1449 PF13563 2'-5' RNA ligase superfamily DM57_14490 PF01610 DM57_14490 DM57_14490 PF13542 DM57_14490 DM57_14490 PF14690 DM57_14490 DM57_14495 PF01527 Transposase DM57_145 PF13340 DM57_145 DM57_1450 PF00005 ABC transporter DM57_1450 PF06472 DM57_1450 DM57_14500 PF13276 DM57_14500 DM57_14500 PF13683 DM57_14500 DM57_14505 PF00324 Amino acid permease DM57_1451 PF01266 FAD dependent oxidoreductase DM57_14515 PF05598 DM57_14515 DM57_14515 PF13751 DM57_14515 DM57_1452 PF02597 ThiS family DM57_14520 PF05494 Toluene tolerance, Ttg2 DM57_14525 PF14518 Iron-containing redox enzyme DM57_1453 PF05690 Thiazole biosynthesis protein ThiG DM57_14530 PF00563 EAL domain DM57_14530 PF00990 GGDEF domain DM57_14530 PF13426 PAS domain DM57_14535 PF00561 alpha/beta hydrolase fold DM57_14540 PF01648 4'-phosphopantetheinyl transferase superfamily DM57_14545 PF14248 DM57_14545 DM57_1455 PF00005 ABC transporter DM57_14555 PF17131 DM57_14555 DM57_1456 PF02405 DM57_1456 DM57_14560 PF02687 DM57_14560 DM57_14565 PF00005 ABC transporter DM57_1457 PF02470 DM57_1457 DM57_14570 PF00743 Flavin-binding monooxygenase-like DM57_14575 PF00067 Cytochrome P450 DM57_14575 PF08659 KR domain DM57_1458 PF04333 DM57_1458 DM57_14580 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_14580 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_14580 PF08659 KR domain DM57_14580 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_14580 PF14765 Polyketide synthase dehydratase DM57_14585 PF00550 Phosphopantetheine attachment site DM57_14585 PF00698 Acyl transferase domain DM57_1459 PF05494 Toluene tolerance, Ttg2 DM57_14590 PF03176 MMPL family DM57_14595 PF04333 DM57_14595 DM57_146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_146 PF03466 LysR substrate binding domain DM57_1460 PF13466 STAS domain DM57_14600 PF02627 Carboxymuconolactone decarboxylase family DM57_14605 PF00202 Aminotransferase class-III DM57_1461 PF00005 ABC transporter DM57_14610 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase DM57_14615 PF00005 ABC transporter DM57_1462 PF01061 DM57_1462 DM57_14620 PF00528 Binding-protein-dependent transport system inner membrane component DM57_14625 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_1463 PF01722 BolA-like protein DM57_14630 PF01048 Phosphorylase superfamily DM57_14635 PF13243 Prenyltransferase-like DM57_14635 PF13249 Prenyltransferase-like DM57_1464 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM57_14645 PF00494 Squalene/phytoene synthase DM57_1465 PF01634 ATP phosphoribosyltransferase DM57_14650 PF12697 Alpha/beta hydrolase family DM57_14655 PF00990 GGDEF domain DM57_14655 PF08448 PAS fold DM57_1466 PF00815 Histidinol dehydrogenase DM57_14660 PF04509 CheC-like family DM57_14665 PF00072 Response regulator receiver domain DM57_1467 PF00155 Aminotransferase class I and II DM57_14670 PF00072 Response regulator receiver domain DM57_14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_14675 PF03358 NADPH-dependent FMN reductase DM57_1468 PF00475 Imidazoleglycerol-phosphate dehydratase DM57_14680 PF04542 Sigma-70 region 2 DM57_14680 PF08281 Sigma-70, region 4 DM57_14685 PF13490 Putative zinc-finger DM57_1469 PF01914 DM57_1469 DM57_14690 PF03960 ArsC family DM57_14695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM57_147 PF04079 Putative transcriptional regulators (Ypuh-like) DM57_1470 PF00117 Glutamine amidotransferase class-I DM57_14700 PF02195 ParB-like nuclease domain DM57_14705 PF01051 Initiator Replication protein DM57_1471 PF00977 Histidine biosynthesis protein DM57_14710 PF01527 Transposase DM57_14715 PF13276 DM57_14715 DM57_14715 PF13683 DM57_14715 DM57_1472 PF00977 Histidine biosynthesis protein DM57_14725 PF11740 DM57_14725 DM57_1473 PF01502 Phosphoribosyl-AMP cyclohydrolase DM57_14730 PF00589 Phage integrase family DM57_14735 PF10616 DM57_14735 DM57_1474 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DM57_14740 PF01381 Helix-turn-helix DM57_14740 PF07883 Cupin domain DM57_14745 PF00155 Aminotransferase class I and II DM57_14750 PF00107 Zinc-binding dehydrogenase DM57_14750 PF08240 Alcohol dehydrogenase GroES-like domain DM57_14755 PF04264 YceI-like domain DM57_1476 PF01230 HIT domain DM57_14760 PF00440 Bacterial regulatory proteins, tetR family DM57_14765 PF07080 Protein of unknown function (DUF1348) DM57_1477 PF02416 mttA/Hcf106 family DM57_14770 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DM57_14775 PF00180 Isocitrate/isopropylmalate dehydrogenase DM57_1478 PF02416 mttA/Hcf106 family DM57_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_14780 PF03466 LysR substrate binding domain DM57_14785 PF04191 Phospholipid methyltransferase DM57_1479 PF00902 Sec-independent protein translocase protein (TatC) DM57_148 PF00849 RNA pseudouridylate synthase DM57_148 PF01479 S4 domain DM57_1480 PF13180 PDZ domain DM57_1480 PF13365 Trypsin-like peptidase domain DM57_14805 PF13276 DM57_14805 DM57_14805 PF13683 DM57_14805 DM57_1481 PF01784 NIF3 (NGG1p interacting factor 3) DM57_14815 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DM57_1482 PF00355 Rieske [2Fe-2S] domain DM57_1482 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DM57_1483 PF00032 Cytochrome b(C-terminal)/b6/petD DM57_1483 PF00033 Cytochrome b(N-terminal)/b6/petB DM57_14835 PF04964 DM57_14835 DM57_1484 PF02167 Cytochrome C1 family DM57_1485 PF00043 Glutathione S-transferase, C-terminal domain DM57_1485 PF13417 Glutathione S-transferase, N-terminal domain DM57_1486 PF04386 Stringent starvation protein B DM57_1489 PF04860 Phage portal protein DM57_149 PF02576 Uncharacterised BCR, YhbC family COG0779 DM57_149 PF17384 DM57_149 DM57_1492 PF01527 Transposase DM57_1493 PF13276 DM57_1493 DM57_1493 PF13683 DM57_1493 DM57_1495 PF01313 DM57_1495 DM57_14950 PF00698 Acyl transferase domain DM57_1496 PF01311 DM57_1496 DM57_14960 PF03860 Domain of Unknown Function (DUF326) DM57_1497 PF13411 MerR HTH family regulatory protein DM57_1498 PF13649 Methyltransferase domain DM57_1499 PF11158 DM57_1499 DM57_15 PF00419 Fimbrial protein DM57_150 PF00575 S1 RNA binding domain DM57_150 PF08529 NusA N-terminal domain DM57_150 PF13184 NusA-like KH domain DM57_150 PF14520 Helix-hairpin-helix domain DM57_1500 PF09084 NMT1/THI5 like DM57_1501 PF00005 ABC transporter DM57_15015 PF13276 DM57_15015 DM57_15015 PF13683 DM57_15015 DM57_1502 PF00528 Binding-protein-dependent transport system inner membrane component DM57_1503 PF00512 His Kinase A (phospho-acceptor) domain DM57_1503 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_1503 PF08521 DM57_1503 DM57_15030 PF12833 Helix-turn-helix domain DM57_15035 PF01391 Collagen triple helix repeat (20 copies) DM57_1504 PF00072 Response regulator receiver domain DM57_1504 PF00486 Transcriptional regulatory protein, C terminal DM57_1505 PF13609 Gram-negative porin DM57_1506 PF01555 DNA methylase DM57_1507 PF04851 Type III restriction enzyme, res subunit DM57_1508 PF13609 Gram-negative porin DM57_15080 PF00043 Glutathione S-transferase, C-terminal domain DM57_15085 PF13276 DM57_15085 DM57_15085 PF13683 DM57_15085 DM57_1509 PF12833 Helix-turn-helix domain DM57_1509 PF14525 DM57_1509 DM57_15095 PF00561 alpha/beta hydrolase fold DM57_151 PF00009 Elongation factor Tu GTP binding domain DM57_151 PF04760 Translation initiation factor IF-2, N-terminal region DM57_151 PF08364 DM57_151 DM57_151 PF11987 Translation-initiation factor 2 DM57_1510 PF00005 ABC transporter DM57_1511 PF00005 ABC transporter DM57_1512 PF02653 DM57_1512 DM57_1513 PF02653 DM57_1513 DM57_15135 PF13276 DM57_15135 DM57_15135 PF13683 DM57_15135 DM57_1514 PF13458 Periplasmic binding protein DM57_1515 PF00171 Aldehyde dehydrogenase family DM57_15155 PF01610 DM57_15155 DM57_15155 PF13542 DM57_15155 DM57_15155 PF14690 DM57_15155 DM57_1516 PF12680 SnoaL-like domain DM57_1517 PF10703 Molybdenum cofactor biosynthesis protein F DM57_1517 PF17409 DM57_1517 DM57_1518 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1519 PF00732 GMC oxidoreductase DM57_1519 PF05199 GMC oxidoreductase DM57_152 PF02033 Ribosome-binding factor A DM57_1520 PF03551 Transcriptional regulator PadR-like family DM57_1521 PF08006 DM57_1521 DM57_1522 PF13276 DM57_1522 DM57_1522 PF13683 DM57_1522 DM57_1523 PF01527 Transposase DM57_15245 PF00291 Pyridoxal-phosphate dependent enzyme DM57_15245 PF00585 C-terminal regulatory domain of Threonine dehydratase DM57_1525 PF04347 DM57_1525 DM57_1526 PF01052 Surface presentation of antigens (SPOA) DM57_1527 PF01052 Surface presentation of antigens (SPOA) DM57_1527 PF02154 Flagellar motor switch protein FliM DM57_15270 PF13276 DM57_15270 DM57_15270 PF13683 DM57_15270 DM57_1528 PF03748 DM57_1528 DM57_15280 PF00825 Ribonuclease P DM57_15285 PF13276 DM57_15285 DM57_15285 PF13683 DM57_15285 DM57_1529 PF04172 DM57_1529 DM57_153 PF01509 TruB family pseudouridylate synthase (N terminal domain) DM57_153 PF09157 Pseudouridine synthase II TruB, C-terminal DM57_153 PF16198 DM57_153 DM57_1530 PF03788 DM57_1530 DM57_1531 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1531 PF03466 LysR substrate binding domain DM57_1532 PF07690 Major Facilitator Superfamily DM57_1533 PF01047 MarR family DM57_1535 PF02321 Outer membrane efflux protein DM57_1536 PF01203 DM57_1536 DM57_15365 PF00156 Phosphoribosyl transferase domain DM57_1537 PF04612 Type II secretion system (T2SS), protein M DM57_15370 PF13276 DM57_15370 DM57_15370 PF13683 DM57_15370 DM57_1538 PF05134 Type II secretion system (T2SS), protein L DM57_1538 PF12693 GspL periplasmic domain DM57_15380 PF03899 DM57_15380 DM57_1539 PF03934 Type II secretion system (T2SS), protein K DM57_154 PF07690 Major Facilitator Superfamily DM57_1540 PF07963 Prokaryotic N-terminal methylation motif DM57_15405 PF05598 DM57_15405 DM57_15405 PF13751 DM57_15405 DM57_1541 PF02501 Type II secretion system (T2SS), protein I DM57_1541 PF07963 Prokaryotic N-terminal methylation motif DM57_1542 PF07963 Prokaryotic N-terminal methylation motif DM57_1542 PF12019 Type II transport protein GspH DM57_1543 PF07963 Prokaryotic N-terminal methylation motif DM57_1543 PF08334 Type II secretion system (T2SS), protein G DM57_15435 PF01527 Transposase DM57_15445 PF13539 D-alanyl-D-alanine carboxypeptidase DM57_1545 PF00482 Type II secretion system (T2SS), protein F DM57_15450 PF13276 DM57_15450 DM57_15450 PF13683 DM57_15450 DM57_15455 PF01527 Transposase DM57_1546 PF00437 Type II/IV secretion system protein DM57_1546 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DM57_15460 PF00313 'Cold-shock' DNA-binding domain DM57_15465 PF05598 DM57_15465 DM57_15465 PF13751 DM57_15465 DM57_1547 PF00263 DM57_1547 DM57_1547 PF03958 Bacterial type II/III secretion system short domain DM57_1548 PF01464 Transglycosylase SLT domain DM57_15480 PF17289 DM57_15480 DM57_1549 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM57_1549 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM57_15490 PF02581 Thiamine monophosphate synthase/TENI DM57_15495 PF01527 Transposase DM57_155 PF00529 HlyD family secretion protein DM57_155 PF16576 DM57_155 DM57_15500 PF13276 DM57_15500 DM57_15500 PF13683 DM57_15500 DM57_15505 PF03884 Domain of unknown function (DUF329) DM57_15535 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein DM57_1556 PF00324 Amino acid permease DM57_15565 PF05598 DM57_15565 DM57_15565 PF13751 DM57_15565 DM57_15570 PF00534 Glycosyl transferases group 1 DM57_15575 PF00534 Glycosyl transferases group 1 DM57_1558 PF00034 Cytochrome c DM57_15585 PF01527 Transposase DM57_1559 PF04972 BON domain DM57_15590 PF05159 DM57_15590 DM57_156 PF02321 Outer membrane efflux protein DM57_1560 PF13580 SIS domain DM57_15600 PF13276 DM57_15600 DM57_15600 PF13683 DM57_15600 DM57_1561 PF02021 Uncharacterised protein family UPF0102 DM57_1562 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_15625 PF13276 DM57_15625 DM57_15625 PF13683 DM57_15625 DM57_1564 PF00012 Hsp70 protein DM57_1565 PF00881 Nitroreductase family DM57_15655 PF02146 Sir2 family DM57_1566 PF07690 Major Facilitator Superfamily DM57_1567 PF00440 Bacterial regulatory proteins, tetR family DM57_1568 PF07209 DM57_1568 DM57_1569 PF13679 DM57_1569 DM57_157 PF12802 MarR family DM57_1570 PF05175 Methyltransferase small domain DM57_15700 PF13276 DM57_15700 DM57_15700 PF13683 DM57_15700 DM57_15705 PF08897 DM57_15705 DM57_1571 PF01757 DM57_1571 DM57_1572 PF03168 Late embryogenesis abundant protein DM57_1573 PF01433 Peptidase family M1 DM57_15730 PF01467 Cytidylyltransferase DM57_1576 PF13437 HlyD family secretion protein DM57_1577 PF00005 ABC transporter DM57_1577 PF00664 ABC transporter transmembrane region DM57_1577 PF03412 Peptidase C39 family DM57_15770 PF05598 DM57_15770 DM57_15770 PF13751 DM57_15770 DM57_15775 PF05598 DM57_15775 DM57_15775 PF13751 DM57_15775 DM57_1578 PF02321 Outer membrane efflux protein DM57_158 PF00009 Elongation factor Tu GTP binding domain DM57_158 PF00679 Elongation factor G C-terminus DM57_158 PF03144 Elongation factor Tu domain 2 DM57_1581 PF06744 DM57_1581 DM57_1581 PF06761 DM57_1581 DM57_1581 PF14331 DM57_1581 DM57_1582 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) DM57_15820 PF05598 DM57_15820 DM57_15820 PF13751 DM57_15820 DM57_1583 PF00691 OmpA family DM57_15830 PF11065 DM57_15830 DM57_1584 PF06812 DM57_1584 DM57_1585 PF00004 ATPase family associated with various cellular activities (AAA) DM57_1585 PF02861 Clp amino terminal domain DM57_1585 PF07724 AAA domain (Cdc48 subfamily) DM57_1585 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_15855 PF05598 DM57_15855 DM57_15855 PF13751 DM57_15855 DM57_1586 PF06996 DM57_1586 DM57_15860 PF05598 DM57_15860 DM57_15860 PF13751 DM57_15860 DM57_1587 PF05947 DM57_1587 DM57_15875 PF01527 Transposase DM57_1588 PF04965 Gene 25-like lysozyme DM57_1589 PF13276 DM57_1589 DM57_1589 PF13683 DM57_1589 DM57_159 PF00676 Dehydrogenase E1 component DM57_159 PF02779 Transketolase, pyrimidine binding domain DM57_159 PF16078 DM57_159 DM57_159 PF16870 DM57_159 DM57_1590 PF03060 Nitronate monooxygenase DM57_1591 PF01738 Dienelactone hydrolase family DM57_15910 PF01527 Transposase DM57_1592 PF01425 Amidase DM57_1593 PF02219 Methylenetetrahydrofolate reductase DM57_1594 PF04020 DM57_1594 DM57_1595 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM57_1595 PF05221 S-adenosyl-L-homocysteine hydrolase DM57_1596 PF04539 Sigma-70 region 3 DM57_1596 PF04542 Sigma-70 region 2 DM57_1596 PF04545 Sigma-70, region 4 DM57_1597 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM57_15985 PF03895 YadA-like C-terminal region DM57_1599 PF00771 FHIPEP family DM57_15995 PF13276 DM57_15995 DM57_15995 PF13683 DM57_15995 DM57_16 PF00577 Outer membrane usher protein DM57_16 PF13953 PapC C-terminal domain DM57_16 PF13954 PapC N-terminal domain DM57_160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM57_160 PF00364 Biotin-requiring enzyme DM57_160 PF02817 e3 binding domain DM57_16000 PF13276 DM57_16000 DM57_16000 PF13683 DM57_16000 DM57_16005 PF13276 DM57_16005 DM57_16005 PF13683 DM57_16005 DM57_1601 PF01312 FlhB HrpN YscU SpaS Family DM57_16015 PF13276 DM57_16015 DM57_16015 PF13683 DM57_16015 DM57_1602 PF06983 3-demethylubiquinone-9 3-methyltransferase DM57_1603 PF11925 DM57_1603 DM57_1604 PF11005 DM57_1604 DM57_1605 PF04344 Chemotaxis phosphatase, CheZ DM57_1606 PF00072 Response regulator receiver domain DM57_1607 PF00072 Response regulator receiver domain DM57_1607 PF01339 CheB methylesterase DM57_16070 PF01551 Peptidase family M23 DM57_1608 PF03975 CheD chemotactic sensory transduction DM57_1609 PF01739 CheR methyltransferase, SAM binding domain DM57_1609 PF03705 CheR methyltransferase, all-alpha domain DM57_16090 PF01391 Collagen triple helix repeat (20 copies) DM57_161 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM57_161 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_1610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_1610 PF00672 HAMP domain DM57_1610 PF02203 Tar ligand binding domain homologue DM57_1611 PF01584 CheW-like domain DM57_1612 PF01584 CheW-like domain DM57_1612 PF01627 Hpt domain DM57_1612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_1612 PF02895 Signal transducing histidine kinase, homodimeric domain DM57_1612 PF09078 CheY binding DM57_1613 PF00072 Response regulator receiver domain DM57_1616 PF01618 DM57_1616 DM57_1617 PF05280 Flagellar transcriptional activator (FlhC) DM57_1618 PF05247 Flagellar transcriptional activator (FlhD) DM57_1619 PF00534 Glycosyl transferases group 1 DM57_1619 PF13439 Glycosyltransferase Family 4 DM57_162 PF03969 AFG1-like ATPase DM57_1620 PF00816 H-NS histone family DM57_1621 PF00230 Major intrinsic protein DM57_1622 PF08282 haloacid dehalogenase-like hydrolase DM57_1623 PF01869 BadF/BadG/BcrA/BcrD ATPase family DM57_1624 PF03352 Methyladenine glycosylase DM57_1625 PF01165 Ribosomal protein S21 DM57_1626 PF00669 Bacterial flagellin N-terminal helical region DM57_1626 PF00700 Bacterial flagellin C-terminal helical region DM57_1626 PF12613 DM57_1626 DM57_1627 PF02465 DM57_1627 DM57_1627 PF07195 DM57_1627 DM57_1627 PF07196 Flagellin hook IN motif DM57_1628 PF05400 Flagellar protein FliT DM57_1629 PF13432 Tetratricopeptide repeat DM57_1629 PF13844 Glycosyl transferase family 41 DM57_163 PF13340 DM57_163 DM57_1630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DM57_1631 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DM57_1631 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM57_1633 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DM57_1633 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM57_1634 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_1635 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_1636 PF00355 Rieske [2Fe-2S] domain DM57_1636 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM57_1637 PF13489 Methyltransferase domain DM57_1639 PF01810 DM57_1639 DM57_164 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) DM57_1640 PF04185 Phosphoesterase family DM57_1641 PF05643 Putative bacterial lipoprotein (DUF799) DM57_1642 PF16068 DM57_1642 DM57_1643 PF03783 Curli production assembly/transport component CsgG DM57_1645 PF00561 alpha/beta hydrolase fold DM57_1646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_1646 PF00672 HAMP domain DM57_1646 PF02743 Cache domain DM57_1647 PF01565 FAD binding domain DM57_1647 PF08031 Berberine and berberine like DM57_1648 PF03067 Chitin binding domain DM57_165 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DM57_165 PF08479 POTRA domain, ShlB-type DM57_1651 PF01527 Transposase DM57_1652 PF13276 DM57_1652 DM57_1652 PF13683 DM57_1652 DM57_1653 PF00589 Phage integrase family DM57_1655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_1656 PF00580 UvrD/REP helicase N-terminal domain DM57_1656 PF13361 UvrD-like helicase C-terminal domain DM57_1658 PF13472 GDSL-like Lipase/Acylhydrolase family DM57_1659 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM57_1659 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM57_166 PF15984 DM57_166 DM57_1661 PF01571 Aminomethyltransferase folate-binding domain DM57_1661 PF08669 Glycine cleavage T-protein C-terminal barrel domain DM57_1662 PF01597 Glycine cleavage H-protein DM57_1663 PF02347 Glycine cleavage system P-protein DM57_1664 PF05426 Alginate lyase DM57_1665 PF03313 DM57_1665 DM57_1665 PF03315 Serine dehydratase beta chain DM57_1667 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_1667 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_1667 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_1669 PF12833 Helix-turn-helix domain DM57_167 PF15984 DM57_167 DM57_1670 PF00171 Aldehyde dehydrogenase family DM57_1672 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DM57_1673 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DM57_1675 PF13520 Amino acid permease DM57_1676 PF01757 DM57_1676 DM57_1677 PF05552 Conserved TM helix DM57_1678 PF12773 DM57_1678 DM57_1679 PF00122 E1-E2 ATPase DM57_1679 PF00702 haloacid dehalogenase-like hydrolase DM57_1680 PF13411 MerR HTH family regulatory protein DM57_1681 PF03551 Transcriptional regulator PadR-like family DM57_1682 PF02913 FAD linked oxidases, C-terminal domain DM57_1684 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_1685 PF00155 Aminotransferase class I and II DM57_1686 PF00440 Bacterial regulatory proteins, tetR family DM57_1687 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_1687 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_1688 PF00501 AMP-binding enzyme DM57_1688 PF13193 AMP-binding enzyme C-terminal domain DM57_1689 PF13458 Periplasmic binding protein DM57_169 PF01527 Transposase DM57_1690 PF00171 Aldehyde dehydrogenase family DM57_1690 PF01619 Proline dehydrogenase DM57_1690 PF14850 DNA-binding domain of Proline dehydrogenase DM57_1692 PF00270 DEAD/DEAH box helicase DM57_1692 PF00271 Helicase conserved C-terminal domain DM57_1693 PF01208 Uroporphyrinogen decarboxylase (URO-D) DM57_1694 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_1695 PF13380 CoA binding domain DM57_1696 PF00501 AMP-binding enzyme DM57_1696 PF13193 AMP-binding enzyme C-terminal domain DM57_1697 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DM57_1697 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DM57_1698 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_1698 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM57_1699 PF00231 ATP synthase DM57_17 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM57_17 PF02753 Pili assembly chaperone PapD, C-terminal domain DM57_1700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_1700 PF00306 ATP synthase alpha/beta chain, C terminal domain DM57_1700 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM57_1701 PF00213 ATP synthase delta (OSCP) subunit DM57_1702 PF00430 ATP synthase B/B' CF(0) DM57_1703 PF00137 ATP synthase subunit C DM57_1704 PF00119 ATP synthase A chain DM57_1706 PF03600 Citrate transporter DM57_1707 PF02195 ParB-like nuclease domain DM57_1708 PF13614 AAA domain DM57_1709 PF02527 rRNA small subunit methyltransferase G DM57_171 PF01804 Penicillin amidase DM57_1710 PF01134 Glucose inhibited division protein A DM57_1710 PF13932 GidA associated domain 3 DM57_1711 PF00005 ABC transporter DM57_1712 PF00005 ABC transporter DM57_1712 PF02653 DM57_1712 DM57_1712 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM57_1713 PF02653 DM57_1713 DM57_1714 PF13458 Periplasmic binding protein DM57_1716 PF02653 DM57_1716 DM57_1717 PF02653 DM57_1717 DM57_1718 PF13458 Periplasmic binding protein DM57_1719 PF00005 ABC transporter DM57_1720 PF00005 ABC transporter DM57_1720 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM57_1721 PF00732 GMC oxidoreductase DM57_1721 PF05199 GMC oxidoreductase DM57_1722 PF00171 Aldehyde dehydrogenase family DM57_1723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1723 PF03466 LysR substrate binding domain DM57_1724 PF01928 CYTH domain DM57_1725 PF01037 AsnC family DM57_1725 PF13404 AsnC-type helix-turn-helix domain DM57_1726 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DM57_1727 PF01329 Pterin 4 alpha carbinolamine dehydratase DM57_1728 PF12512 DM57_1728 DM57_1729 PF00072 Response regulator receiver domain DM57_1729 PF00486 Transcriptional regulatory protein, C terminal DM57_1730 PF00512 His Kinase A (phospho-acceptor) domain DM57_1730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_1730 PF08521 DM57_1730 DM57_1731 PF00856 SET domain DM57_1732 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM57_1733 PF00117 Glutamine amidotransferase class-I DM57_1734 PF12802 MarR family DM57_1735 PF04107 Glutamate-cysteine ligase family 2(GCS2) DM57_1736 PF00999 Sodium/hydrogen exchanger family DM57_1737 PF01266 FAD dependent oxidoreductase DM57_1737 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DM57_1738 PF00216 Bacterial DNA-binding protein DM57_174 PF00072 Response regulator receiver domain DM57_174 PF00196 Bacterial regulatory proteins, luxR family DM57_1740 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel DM57_1741 PF00753 Metallo-beta-lactamase superfamily DM57_1743 PF01037 AsnC family DM57_1743 PF13412 Winged helix-turn-helix DNA-binding DM57_1744 PF01545 Cation efflux family DM57_1744 PF16916 DM57_1744 DM57_1745 PF00816 H-NS histone family DM57_1746 PF13883 Pyridoxamine 5'-phosphate oxidase DM57_1747 PF07690 Major Facilitator Superfamily DM57_1748 PF13458 Periplasmic binding protein DM57_1750 PF01527 Transposase DM57_1751 PF00436 Single-strand binding protein family DM57_1752 PF07690 Major Facilitator Superfamily DM57_1755 PF00551 Formyl transferase DM57_1756 PF00293 NUDIX domain DM57_1756 PF15916 DM57_1756 DM57_1757 PF01810 DM57_1757 DM57_1759 PF00999 Sodium/hydrogen exchanger family DM57_1759 PF02080 TrkA-C domain DM57_1759 PF02254 TrkA-N domain DM57_1760 PF00571 CBS domain DM57_1760 PF01380 SIS domain DM57_1762 PF06835 Lipopolysaccharide-assembly, LptC-related DM57_1763 PF03968 OstA-like protein DM57_1764 PF00005 ABC transporter DM57_1764 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM57_1766 PF00309 DM57_1766 DM57_1766 PF04552 Sigma-54, DNA binding domain DM57_1766 PF04963 Sigma-54 factor, core binding domain DM57_1767 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DM57_1768 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DM57_1769 PF02603 HPr Serine kinase N terminus DM57_1769 PF07475 HPr Serine kinase C-terminal domain DM57_1770 PF03668 DM57_1770 DM57_1771 PF02190 ATP-dependent protease La (LON) domain DM57_1772 PF00633 Helix-hairpin-helix motif DM57_1772 PF00730 HhH-GPD superfamily base excision DNA repair protein DM57_1772 PF14815 NUDIX domain DM57_1773 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DM57_1773 PF06827 Zinc finger found in FPG and IleRS DM57_1773 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DM57_1774 PF13432 Tetratricopeptide repeat DM57_1774 PF14559 Tetratricopeptide repeat DM57_1775 PF03550 Outer membrane lipoprotein LolB DM57_1776 PF00288 GHMP kinases N terminal domain DM57_1776 PF08544 GHMP kinases C terminal DM57_1778 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DM57_1778 PF14572 Phosphoribosyl synthetase-associated domain DM57_1779 PF01386 Ribosomal L25p family DM57_1779 PF14693 Ribosomal protein TL5, C-terminal domain DM57_1780 PF01195 Peptidyl-tRNA hydrolase DM57_1781 PF00155 Aminotransferase class I and II DM57_1782 PF12838 4Fe-4S dicluster domain DM57_1783 PF01467 Cytidylyltransferase DM57_1784 PF03602 Conserved hypothetical protein 95 DM57_1785 PF00448 SRP54-type protein, GTPase domain DM57_1785 PF02881 SRP54-type protein, helical bundle domain DM57_1786 PF13417 Glutathione S-transferase, N-terminal domain DM57_1787 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DM57_1787 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DM57_1787 PF04324 BFD-like [2Fe-2S] binding domain DM57_1787 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_1788 PF00355 Rieske [2Fe-2S] domain DM57_1789 PF00384 Molybdopterin oxidoreductase DM57_1789 PF01568 Molydopterin dinucleotide binding domain DM57_1789 PF04324 BFD-like [2Fe-2S] binding domain DM57_1789 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM57_1790 PF02885 Glycosyl transferase family, helical bundle domain DM57_1791 PF00583 Acetyltransferase (GNAT) family DM57_1792 PF00682 HMGL-like DM57_1793 PF14534 Domain of unknown function (DUF4440) DM57_1794 PF09411 Lipid A 3-O-deacylase (PagL) DM57_1795 PF00140 Sigma-70 factor, region 1 DM57_1795 PF04542 Sigma-70 region 2 DM57_1795 PF04545 Sigma-70, region 4 DM57_1799 PF04392 ABC transporter substrate binding protein DM57_18 PF00419 Fimbrial protein DM57_1800 PF02653 DM57_1800 DM57_1801 PF00005 ABC transporter DM57_1803 PF00817 impB/mucB/samB family DM57_1804 PF02811 PHP domain DM57_1804 PF07733 Bacterial DNA polymerase III alpha subunit DM57_1804 PF14579 Helix-hairpin-helix motif DM57_1806 PF07690 Major Facilitator Superfamily DM57_1807 PF00487 DM57_1807 DM57_1808 PF00202 Aminotransferase class-III DM57_181 PF00419 Fimbrial protein DM57_1810 PF12698 ABC-2 family transporter protein DM57_1811 PF00005 ABC transporter DM57_1812 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_1813 PF13649 Methyltransferase domain DM57_1814 PF00285 Citrate synthase DM57_1815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_1815 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_1815 PF12418 DM57_1815 DM57_1815 PF12806 DM57_1815 DM57_1817 PF00501 AMP-binding enzyme DM57_1817 PF13193 AMP-binding enzyme C-terminal domain DM57_1818 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DM57_1818 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DM57_1819 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM57_182 PF00577 Outer membrane usher protein DM57_182 PF13953 PapC C-terminal domain DM57_182 PF13954 PapC N-terminal domain DM57_1820 PF11583 P-aminobenzoate N-oxygenase AurF DM57_1823 PF00550 Phosphopantetheine attachment site DM57_1825 PF00501 AMP-binding enzyme DM57_1825 PF13193 AMP-binding enzyme C-terminal domain DM57_1826 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1826 PF03466 LysR substrate binding domain DM57_1827 PF00392 Bacterial regulatory proteins, gntR family DM57_1827 PF07702 UTRA domain DM57_1828 PF01979 Amidohydrolase family DM57_1829 PF01380 SIS domain DM57_183 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM57_183 PF02753 Pili assembly chaperone PapD, C-terminal domain DM57_1830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DM57_1830 PF00381 PTS HPr component phosphorylation site DM57_1830 PF00391 PEP-utilising enzyme, mobile domain DM57_1830 PF02896 PEP-utilising enzyme, TIM barrel domain DM57_1830 PF05524 PEP-utilising enzyme, N-terminal DM57_1831 PF00367 phosphotransferase system, EIIB DM57_1831 PF02378 Phosphotransferase system, EIIC DM57_1832 PF00728 Glycosyl hydrolase family 20, catalytic domain DM57_1832 PF02838 Glycosyl hydrolase family 20, domain 2 DM57_1832 PF03173 Putative carbohydrate binding domain DM57_1833 PF08173 DM57_1833 DM57_1835 PF02322 DM57_1835 DM57_1836 PF01654 DM57_1836 DM57_1838 PF01610 DM57_1838 DM57_1838 PF13542 DM57_1838 DM57_1838 PF14690 DM57_1838 DM57_1839 PF05598 DM57_1839 DM57_1839 PF13751 DM57_1839 DM57_1840 PF03180 NLPA lipoprotein DM57_1841 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_1841 PF17200 DM57_1841 DM57_1842 PF03795 YCII-related domain DM57_1843 PF02630 SCO1/SenC DM57_1844 PF01040 UbiA prenyltransferase family DM57_1845 PF02628 DM57_1845 DM57_1847 PF02104 DM57_1847 DM57_1848 PF11137 DM57_1848 DM57_1849 PF00510 Cytochrome c oxidase subunit III DM57_185 PF01610 DM57_185 DM57_185 PF13542 DM57_185 DM57_185 PF14690 DM57_185 DM57_1850 PF11174 DM57_1850 DM57_1851 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DM57_1852 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM57_1853 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM57_1853 PF00691 OmpA family DM57_1853 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DM57_1853 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_1854 PF10003 DM57_1854 DM57_1855 PF08241 Methyltransferase domain DM57_1857 PF00588 SpoU rRNA Methylase family DM57_1858 PF01661 Macro domain DM57_1859 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DM57_1859 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DM57_186 PF08670 DM57_186 DM57_1860 PF02556 Preprotein translocase subunit SecB DM57_1861 PF00462 Glutaredoxin DM57_1862 PF00581 Rhodanese-like domain DM57_1863 PF00300 Histidine phosphatase superfamily (branch 1) DM57_1864 PF03572 Peptidase family S41 DM57_1864 PF13180 PDZ domain DM57_1865 PF00899 ThiF family DM57_1866 PF00391 PEP-utilising enzyme, mobile domain DM57_1866 PF02896 PEP-utilising enzyme, TIM barrel domain DM57_1866 PF05524 PEP-utilising enzyme, N-terminal DM57_1867 PF00381 PTS HPr component phosphorylation site DM57_1868 PF03610 PTS system fructose IIA component DM57_1869 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DM57_1869 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DM57_187 PF10503 Esterase PHB depolymerase DM57_1870 PF08886 Glutamate-cysteine ligase DM57_1871 PF05598 DM57_1871 DM57_1871 PF13751 DM57_1871 DM57_1872 PF00909 Ammonium Transporter Family DM57_1873 PF00543 Nitrogen regulatory protein P-II DM57_1874 PF04380 DM57_1874 DM57_1875 PF01078 Magnesium chelatase, subunit ChlI DM57_1875 PF13335 DM57_1875 DM57_1875 PF13541 Subunit ChlI of Mg-chelatase DM57_1876 PF13508 Acetyltransferase (GNAT) domain DM57_1877 PF00975 Thioesterase domain DM57_1879 PF08534 Redoxin DM57_1880 PF00072 Response regulator receiver domain DM57_1880 PF00158 Sigma-54 interaction domain DM57_1880 PF02954 Bacterial regulatory protein, Fis family DM57_1883 PF00375 Sodium:dicarboxylate symporter family DM57_1884 PF00474 Sodium:solute symporter family DM57_1885 PF04341 DM57_1885 DM57_1886 PF02515 CoA-transferase family III DM57_1887 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_1887 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_1887 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_1888 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_1888 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_1888 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_1889 PF00378 Enoyl-CoA hydratase/isomerase family DM57_1889 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM57_1889 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM57_1890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_1890 PF03466 LysR substrate binding domain DM57_1892 PF01019 Gamma-glutamyltranspeptidase DM57_1895 PF00107 Zinc-binding dehydrogenase DM57_1895 PF08240 Alcohol dehydrogenase GroES-like domain DM57_1897 PF06719 DM57_1897 DM57_1897 PF12833 Helix-turn-helix domain DM57_1898 PF01435 Peptidase family M48 DM57_1899 PF07690 Major Facilitator Superfamily DM57_19 PF00005 ABC transporter DM57_1900 PF07021 Methionine biosynthesis protein MetW DM57_1901 PF00561 alpha/beta hydrolase fold DM57_1902 PF00440 Bacterial regulatory proteins, tetR family DM57_1903 PF13419 Haloacid dehalogenase-like hydrolase DM57_1904 PF00696 Amino acid kinase family DM57_1905 PF14375 DM57_1905 DM57_1906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_1907 PF00072 Response regulator receiver domain DM57_1907 PF02954 Bacterial regulatory protein, Fis family DM57_1908 PF00004 ATPase family associated with various cellular activities (AAA) DM57_1908 PF07724 AAA domain (Cdc48 subfamily) DM57_1908 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_1909 PF00227 Proteasome subunit DM57_1910 PF01258 Prokaryotic dksA/traR C4-type zinc finger DM57_1911 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM57_1911 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM57_1912 PF10672 S-adenosylmethionine-dependent methyltransferase DM57_1913 PF00589 Phage integrase family DM57_1913 PF02899 Phage integrase, N-terminal SAM-like domain DM57_1914 PF04340 Protein of unknown function, DUF484 DM57_1915 PF01678 Diaminopimelate epimerase DM57_1916 PF03279 DM57_1916 DM57_1917 PF00438 S-adenosylmethionine synthetase, N-terminal domain DM57_1917 PF02772 S-adenosylmethionine synthetase, central domain DM57_1917 PF02773 S-adenosylmethionine synthetase, C-terminal domain DM57_1919 PF05721 Phytanoyl-CoA dioxygenase (PhyH) DM57_192 PF04820 Tryptophan halogenase DM57_1920 PF11381 DM57_1920 DM57_1921 PF00248 Aldo/keto reductase family DM57_1923 PF00892 EamA-like transporter family DM57_1924 PF07690 Major Facilitator Superfamily DM57_1926 PF01636 Phosphotransferase enzyme family DM57_1928 PF00171 Aldehyde dehydrogenase family DM57_193 PF00999 Sodium/hydrogen exchanger family DM57_1931 PF00732 GMC oxidoreductase DM57_1931 PF05199 GMC oxidoreductase DM57_1932 PF02120 Flagellar hook-length control protein FliK DM57_1933 PF02050 Flagellar FliJ protein DM57_1934 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_1935 PF02108 DM57_1935 DM57_1936 PF01706 FliG C-terminal domain DM57_1936 PF14841 FliG middle domain DM57_1936 PF14842 FliG N-terminal domain DM57_1937 PF01514 Secretory protein of YscJ/FliF family DM57_1937 PF08345 DM57_1937 DM57_1938 PF02049 DM57_1938 DM57_1939 PF02561 Flagellar protein FliS DM57_194 PF00355 Rieske [2Fe-2S] domain DM57_1940 PF05400 Flagellar protein FliT DM57_1941 PF02120 Flagellar hook-length control protein FliK DM57_1942 PF01312 FlhB HrpN YscU SpaS Family DM57_1943 PF16357 DM57_1943 DM57_1944 PF02625 XdhC and CoxI family DM57_1944 PF13478 XdhC Rossmann domain DM57_1945 PF13520 Amino acid permease DM57_1946 PF00072 Response regulator receiver domain DM57_1946 PF00196 Bacterial regulatory proteins, luxR family DM57_1948 PF05598 DM57_1948 DM57_1948 PF13751 DM57_1948 DM57_1949 PF00175 Oxidoreductase NAD-binding domain DM57_1949 PF00970 Oxidoreductase FAD-binding domain DM57_1950 PF01810 DM57_1950 DM57_1951 PF03372 Endonuclease/Exonuclease/phosphatase family DM57_1953 PF00004 ATPase family associated with various cellular activities (AAA) DM57_1954 PF01266 FAD dependent oxidoreductase DM57_1955 PF01355 High potential iron-sulfur protein DM57_1956 PF00083 Sugar (and other) transporter DM57_1956 PF07690 Major Facilitator Superfamily DM57_1957 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_1958 PF00528 Binding-protein-dependent transport system inner membrane component DM57_196 PF02733 Dak1 domain DM57_196 PF02734 DAK2 domain DM57_1961 PF00005 ABC transporter DM57_1961 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM57_1962 PF00005 ABC transporter DM57_1962 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM57_1963 PF01963 DM57_1963 DM57_1964 PF06166 DM57_1964 DM57_1965 PF06149 DM57_1965 DM57_1966 PF03746 LamB/YcsF family DM57_1967 PF02626 Allophanate hydrolase subunit 2 DM57_1968 PF02682 Allophanate hydrolase subunit 1 DM57_1969 PF13463 Winged helix DNA-binding domain DM57_1970 PF01812 5-formyltetrahydrofolate cyclo-ligase family DM57_1971 PF01464 Transglycosylase SLT domain DM57_1972 PF13460 NADH(P)-binding DM57_1973 PF13410 Glutathione S-transferase, C-terminal domain DM57_1973 PF13417 Glutathione S-transferase, N-terminal domain DM57_1974 PF01743 Poly A polymerase head domain DM57_1974 PF01966 HD domain DM57_1974 PF12627 Probable RNA and SrmB- binding site of polymerase A DM57_1975 PF11747 DM57_1975 DM57_1976 PF05130 FlgN protein DM57_1977 PF04316 Anti-sigma-28 factor, FlgM DM57_1978 PF13144 SAF-like DM57_198 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_198 PF00672 HAMP domain DM57_1980 PF00460 Flagella basal body rod protein DM57_1981 PF00460 Flagella basal body rod protein DM57_1981 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM57_1982 PF03963 DM57_1982 DM57_1982 PF13860 FlgD Ig-like domain DM57_1982 PF13861 FlgD Tudor-like domain DM57_1983 PF00460 Flagella basal body rod protein DM57_1983 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM57_1983 PF07559 Flagellar basal body protein FlaE DM57_1984 PF00460 Flagella basal body rod protein DM57_1984 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM57_1985 PF00460 Flagella basal body rod protein DM57_1985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM57_1986 PF02107 DM57_1986 DM57_1987 PF02119 DM57_1987 DM57_1988 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DM57_1988 PF10135 DM57_1988 DM57_1989 PF07238 PilZ domain DM57_1989 PF07317 Flagellar regulator YcgR DM57_199 PF01061 DM57_199 DM57_1990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM57_1991 PF00669 Bacterial flagellin N-terminal helical region DM57_1992 PF00860 Permease family DM57_1994 PF02417 DM57_1994 DM57_1995 PF02417 DM57_1995 DM57_1997 PF03831 PhnA protein DM57_1997 PF08274 PhnA Zinc-Ribbon DM57_1998 PF06912 DM57_1998 DM57_1999 PF13609 Gram-negative porin DM57_2 PF00482 Type II secretion system (T2SS), protein F DM57_200 PF00005 ABC transporter DM57_2002 PF03706 DM57_2002 DM57_2003 PF13506 Glycosyl transferase family 21 DM57_2005 PF01527 Transposase DM57_2006 PF00204 DNA gyrase B DM57_2006 PF00986 DNA gyrase B subunit, carboxyl terminus DM57_2006 PF01751 Toprim domain DM57_2006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2007 PF00712 DNA polymerase III beta subunit, N-terminal domain DM57_2007 PF02767 DNA polymerase III beta subunit, central domain DM57_2007 PF02768 DNA polymerase III beta subunit, C-terminal domain DM57_2008 PF00308 Bacterial dnaA protein DM57_2008 PF08299 Bacterial dnaA protein helix-turn-helix DM57_2008 PF11638 DnaA N-terminal domain DM57_2009 PF00468 Ribosomal protein L34 DM57_201 PF02424 ApbE family DM57_2011 PF01809 DM57_2011 DM57_2012 PF02096 60Kd inner membrane protein DM57_2012 PF14849 YidC periplasmic domain DM57_2014 PF01926 50S ribosome-binding GTPase DM57_2014 PF10396 GTP-binding protein TrmE N-terminus DM57_2014 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE DM57_2015 PF13276 DM57_2015 DM57_2015 PF13683 DM57_2015 DM57_2016 PF01527 Transposase DM57_2017 PF07152 YaeQ protein DM57_2018 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_2019 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DM57_2019 PF02805 Metal binding domain of Ada DM57_2019 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DM57_2019 PF12833 Helix-turn-helix domain DM57_202 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM57_2020 PF00730 HhH-GPD superfamily base excision DNA repair protein DM57_2020 PF06029 AlkA N-terminal domain DM57_2021 PF04262 Glutamate-cysteine ligase DM57_2022 PF00140 Sigma-70 factor, region 1 DM57_2022 PF04539 Sigma-70 region 3 DM57_2022 PF04542 Sigma-70 region 2 DM57_2022 PF04545 Sigma-70, region 4 DM57_2024 PF07813 LTXXQ motif family protein DM57_2025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2025 PF03466 LysR substrate binding domain DM57_2026 PF13416 Bacterial extracellular solute-binding protein DM57_2027 PF00850 Histone deacetylase domain DM57_2028 PF00795 Carbon-nitrogen hydrolase DM57_203 PF05048 Periplasmic copper-binding protein (NosD) DM57_2030 PF04860 Phage portal protein DM57_2032 PF10908 DM57_2032 DM57_2034 PF01527 Transposase DM57_2035 PF01610 DM57_2035 DM57_2035 PF13542 DM57_2035 DM57_2035 PF14690 DM57_2035 DM57_2037 PF03061 Thioesterase superfamily DM57_2038 PF01734 Patatin-like phospholipase DM57_2039 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM57_2039 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM57_204 PF00005 ABC transporter DM57_2040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2040 PF03466 LysR substrate binding domain DM57_2041 PF01131 DNA topoisomerase DM57_2041 PF01751 Toprim domain DM57_2041 PF13342 DM57_2041 DM57_2042 PF00085 Thioredoxin DM57_2043 PF02481 DNA recombination-mediator protein A DM57_2044 PF01327 Polypeptide deformylase DM57_2045 PF00551 Formyl transferase DM57_2045 PF02911 Formyl transferase, C-terminal domain DM57_2046 PF01810 DM57_2046 DM57_2047 PF01435 Peptidase family M48 DM57_2048 PF01029 NusB family DM57_2048 PF01189 NOL1/NOP2/sun family DM57_2049 PF14334 DM57_2049 DM57_205 PF12679 DM57_205 DM57_2050 PF00512 His Kinase A (phospho-acceptor) domain DM57_2050 PF00672 HAMP domain DM57_2050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2050 PF08448 PAS fold DM57_2051 PF00072 Response regulator receiver domain DM57_2051 PF02954 Bacterial regulatory protein, Fis family DM57_2053 PF06508 Queuosine biosynthesis protein QueC DM57_2054 PF13394 4Fe-4S single cluster domain DM57_2055 PF01242 6-pyruvoyl tetrahydropterin synthase DM57_2056 PF03328 HpcH/HpaI aldolase/citrate lyase family DM57_2057 PF08238 Sel1 repeat DM57_2058 PF01098 DM57_2058 DM57_2059 PF00905 Penicillin binding protein transpeptidase domain DM57_2059 PF03717 Penicillin-binding Protein dimerisation domain DM57_206 PF05573 NosL DM57_2060 PF04093 DM57_2060 DM57_2061 PF04085 rod shape-determining protein MreC DM57_2062 PF06723 MreB/Mbl protein DM57_2063 PF02686 Glu-tRNAGln amidotransferase C subunit DM57_2064 PF01425 Amidase DM57_2065 PF02637 GatB domain DM57_2065 PF02934 GatB/GatE catalytic domain DM57_2066 PF03976 Polyphosphate kinase 2 (PPK2) DM57_2067 PF03372 Endonuclease/Exonuclease/phosphatase family DM57_2068 PF05598 DM57_2068 DM57_2068 PF13751 DM57_2068 DM57_2069 PF04055 Radical SAM superfamily DM57_2069 PF16881 DM57_2069 DM57_2070 PF03099 Biotin/lipoate A/B protein ligase family DM57_2071 PF11142 DM57_2071 DM57_2072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2072 PF03466 LysR substrate binding domain DM57_2073 PF04359 Protein of unknown function (DUF493) DM57_2074 PF01063 Aminotransferase class IV DM57_2075 PF00768 D-alanyl-D-alanine carboxypeptidase DM57_2075 PF07943 Penicillin-binding protein 5, C-terminal domain DM57_2076 PF12146 Putative lysophospholipase DM57_2077 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin DM57_2078 PF04892 DM57_2078 DM57_2079 PF03886 Protein of unknown function (DUF330) DM57_2080 PF02470 DM57_2080 DM57_2081 PF00005 ABC transporter DM57_2082 PF02405 DM57_2082 DM57_2083 PF02872 5'-nucleotidase, C-terminal domain DM57_2084 PF08238 Sel1 repeat DM57_2085 PF02237 Biotin protein ligase C terminal domain DM57_2085 PF03099 Biotin/lipoate A/B protein ligase family DM57_2086 PF03309 Type III pantothenate kinase DM57_2088 PF01467 Cytidylyltransferase DM57_209 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM57_2092 PF01734 Patatin-like phospholipase DM57_2094 PF00378 Enoyl-CoA hydratase/isomerase family DM57_2095 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_2096 PF01614 Bacterial transcriptional regulator DM57_2096 PF09339 IclR helix-turn-helix domain DM57_2097 PF11306 Protein of unknown function (DUF3108) DM57_2098 PF12091 DM57_2098 DM57_2099 PF02574 Homocysteine S-methyltransferase DM57_21 PF01527 Transposase DM57_210 PF04205 FMN-binding domain DM57_210 PF12801 DM57_210 DM57_2100 PF00809 Pterin binding enzyme DM57_2100 PF02310 B12 binding domain DM57_2100 PF02607 B12 binding domain DM57_2100 PF02965 Vitamin B12 dependent methionine synthase, activation domain DM57_2101 PF05598 DM57_2101 DM57_2101 PF13751 DM57_2101 DM57_2102 PF08895 DM57_2102 DM57_2103 PF00750 tRNA synthetases class I (R) DM57_2103 PF03485 Arginyl tRNA synthetase N terminal domain DM57_2103 PF05746 DALR anticodon binding domain DM57_2104 PF05036 Sporulation related domain DM57_2105 PF01323 DSBA-like thioredoxin domain DM57_2106 PF00106 short chain dehydrogenase DM57_2107 PF00106 short chain dehydrogenase DM57_2108 PF12802 MarR family DM57_211 PF00924 Mechanosensitive ion channel DM57_211 PF12607 DM57_211 DM57_2110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_2111 PF00005 ABC transporter DM57_2112 PF00753 Metallo-beta-lactamase superfamily DM57_2113 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DM57_2114 PF00484 Carbonic anhydrase DM57_2115 PF00108 Thiolase, N-terminal domain DM57_2115 PF02803 Thiolase, C-terminal domain DM57_2116 PF00106 short chain dehydrogenase DM57_2118 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DM57_2119 PF00202 Aminotransferase class-III DM57_2120 PF00155 Aminotransferase class I and II DM57_2121 PF13500 AAA domain DM57_2122 PF04055 Radical SAM superfamily DM57_2122 PF06968 Biotin and Thiamin Synthesis associated domain DM57_2123 PF03932 CutC family DM57_2125 PF00245 Alkaline phosphatase DM57_2126 PF00245 Alkaline phosphatase DM57_2129 PF13276 DM57_2129 DM57_2129 PF13683 DM57_2129 DM57_2131 PF13609 Gram-negative porin DM57_2133 PF13593 SBF-like CPA transporter family (DUF4137) DM57_2134 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_2134 PF02203 Tar ligand binding domain homologue DM57_2135 PF00356 Bacterial regulatory proteins, lacI family DM57_2135 PF13377 Periplasmic binding protein-like domain DM57_2136 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) DM57_2137 PF00294 pfkB family carbohydrate kinase DM57_2139 PF11146 DM57_2139 DM57_2140 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase DM57_2141 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_2142 PF02152 Dihydroneopterin aldolase DM57_2143 PF01171 PP-loop family DM57_2144 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_2144 PF12804 MobA-like NTP transferase domain DM57_2145 PF01380 SIS domain DM57_2145 PF13522 Glutamine amidotransferase domain DM57_2146 PF01382 Avidin family DM57_2147 PF11604 Copper binding periplasmic protein CusF DM57_2148 PF00873 AcrB/AcrD/AcrF family DM57_2149 PF11604 Copper binding periplasmic protein CusF DM57_2149 PF16576 DM57_2149 DM57_215 PF03795 YCII-related domain DM57_2150 PF02321 Outer membrane efflux protein DM57_2152 PF04536 TLP18 DM57_2153 PF04536 TLP18 DM57_2154 PF04011 LemA family DM57_2155 PF00122 E1-E2 ATPase DM57_2155 PF00702 haloacid dehalogenase-like hydrolase DM57_2155 PF04945 YHS domain DM57_2156 PF00403 Heavy-metal-associated domain DM57_2159 PF00764 Arginosuccinate synthase DM57_216 PF01544 CorA-like Mg2+ transporter protein DM57_2160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM57_2160 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_2163 PF01566 DM57_2163 DM57_2167 PF04966 Carbohydrate-selective porin, OprB family DM57_2168 PF01527 Transposase DM57_2169 PF13276 DM57_2169 DM57_2169 PF13683 DM57_2169 DM57_217 PF08173 DM57_217 DM57_2170 PF02627 Carboxymuconolactone decarboxylase family DM57_2171 PF12256 Insecticide toxin TcdB middle/N-terminal region DM57_2171 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella DM57_2179 PF00498 FHA domain DM57_218 PF13671 AAA domain DM57_2180 PF00069 Protein kinase domain DM57_2180 PF13191 AAA ATPase domain DM57_2183 PF02624 YcaO-like family DM57_2184 PF00596 Class II Aldolase and Adducin N-terminal domain DM57_2185 PF00563 EAL domain DM57_2185 PF00990 GGDEF domain DM57_2186 PF01943 DM57_2186 DM57_2187 PF00534 Glycosyl transferases group 1 DM57_2188 PF00483 Nucleotidyl transferase DM57_2188 PF01050 Mannose-6-phosphate isomerase DM57_219 PF03435 Saccharopine dehydrogenase DM57_219 PF16653 DM57_219 DM57_2190 PF00534 Glycosyl transferases group 1 DM57_2190 PF13439 Glycosyltransferase Family 4 DM57_2191 PF01569 PAP2 superfamily DM57_2192 PF00158 Sigma-54 interaction domain DM57_2192 PF02954 Bacterial regulatory protein, Fis family DM57_2195 PF08893 DM57_2195 DM57_2197 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_2197 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DM57_2198 PF00550 Phosphopantetheine attachment site DM57_2199 PF13545 Crp-like helix-turn-helix domain DM57_22 PF13276 DM57_22 DM57_22 PF13683 DM57_22 DM57_2200 PF13545 Crp-like helix-turn-helix domain DM57_2201 PF02397 DM57_2201 DM57_2201 PF13727 CoA-binding domain DM57_2202 PF02563 Polysaccharide biosynthesis/export protein DM57_2202 PF10531 SLBB domain DM57_2203 PF00534 Glycosyl transferases group 1 DM57_2205 PF05598 DM57_2205 DM57_2205 PF13751 DM57_2205 DM57_2206 PF07452 DM57_2206 DM57_2207 PF12787 DM57_2207 DM57_2208 PF07859 alpha/beta hydrolase fold DM57_2209 PF07690 Major Facilitator Superfamily DM57_2210 PF01047 MarR family DM57_2211 PF01965 DJ-1/PfpI family DM57_2212 PF01168 Alanine racemase, N-terminal domain DM57_2212 PF14031 Putative serine dehydratase domain DM57_2213 PF01380 SIS domain DM57_2213 PF01418 Helix-turn-helix domain, rpiR family DM57_2214 PF07969 Amidohydrolase family DM57_2215 PF01042 Endoribonuclease L-PSP DM57_2216 PF14489 QueF-like protein DM57_2216 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DM57_2219 PF01565 FAD binding domain DM57_2219 PF02754 DM57_2219 DM57_2219 PF02913 FAD linked oxidases, C-terminal domain DM57_2219 PF11880 DM57_2219 DM57_2219 PF12447 DM57_2219 DM57_2219 PF13183 4Fe-4S dicluster domain DM57_222 PF01037 AsnC family DM57_222 PF13404 AsnC-type helix-turn-helix domain DM57_2220 PF01230 HIT domain DM57_2221 PF06155 Protein of unknown function (DUF971) DM57_2222 PF01209 ubiE/COQ5 methyltransferase family DM57_2223 PF04280 Tim44-like domain DM57_2224 PF02036 SCP-2 sterol transfer family DM57_2225 PF03109 DM57_2225 DM57_2226 PF05724 Thiopurine S-methyltransferase (TPMT) DM57_2227 PF09723 DM57_2227 DM57_2228 PF04367 DM57_2228 DM57_2229 PF00152 tRNA synthetases class II (D, K and N) DM57_2229 PF01336 OB-fold nucleic acid binding domain DM57_2229 PF02938 GAD domain DM57_2230 PF00293 NUDIX domain DM57_2231 PF13091 PLD-like domain DM57_2232 PF00440 Bacterial regulatory proteins, tetR family DM57_2233 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_2233 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_2233 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_2233 PF12418 DM57_2233 DM57_2233 PF12806 DM57_2233 DM57_2234 PF00378 Enoyl-CoA hydratase/isomerase family DM57_2234 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM57_2234 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM57_2235 PF00108 Thiolase, N-terminal domain DM57_2235 PF02803 Thiolase, C-terminal domain DM57_2236 PF00378 Enoyl-CoA hydratase/isomerase family DM57_2237 PF02634 FdhD/NarQ family DM57_2238 PF09655 DM57_2238 DM57_2239 PF03061 Thioesterase superfamily DM57_224 PF07993 Male sterility protein DM57_2240 PF00005 ABC transporter DM57_2240 PF00664 ABC transporter transmembrane region DM57_2241 PF00483 Nucleotidyl transferase DM57_2242 PF01636 Phosphotransferase enzyme family DM57_2243 PF04453 Organic solvent tolerance protein DM57_2244 PF00639 PPIC-type PPIASE domain DM57_2244 PF09312 SurA N-terminal domain DM57_2244 PF13616 PPIC-type PPIASE domain DM57_2245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DM57_2246 PF00398 Ribosomal RNA adenine dimethylase DM57_2247 PF00892 EamA-like transporter family DM57_2248 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM57_2249 PF01863 Protein of unknown function DUF45 DM57_225 PF00501 AMP-binding enzyme DM57_225 PF13193 AMP-binding enzyme C-terminal domain DM57_2250 PF01553 Acyltransferase DM57_2251 PF13242 HAD-hyrolase-like DM57_2252 PF02092 DM57_2252 DM57_2252 PF05746 DALR anticodon binding domain DM57_2254 PF00795 Carbon-nitrogen hydrolase DM57_2255 PF00571 CBS domain DM57_2255 PF03471 Transporter associated domain DM57_2256 PF04752 DM57_2256 DM57_2257 PF02130 Uncharacterized protein family UPF0054 DM57_2258 PF02562 PhoH-like protein DM57_2259 PF00919 Uncharacterized protein family UPF0004 DM57_2259 PF01938 TRAM domain DM57_2259 PF04055 Radical SAM superfamily DM57_226 PF07813 LTXXQ motif family protein DM57_2260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2260 PF03466 LysR substrate binding domain DM57_2261 PF07690 Major Facilitator Superfamily DM57_2262 PF01381 Helix-turn-helix DM57_2262 PF07883 Cupin domain DM57_2263 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DM57_2264 PF13419 Haloacid dehalogenase-like hydrolase DM57_2265 PF00892 EamA-like transporter family DM57_2267 PF00733 Asparagine synthase DM57_2267 PF13537 Glutamine amidotransferase domain DM57_2268 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM57_2269 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM57_227 PF10503 Esterase PHB depolymerase DM57_2270 PF01042 Endoribonuclease L-PSP DM57_2271 PF00230 Major intrinsic protein DM57_2272 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM57_2272 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM57_2273 PF01266 FAD dependent oxidoreductase DM57_2273 PF16901 DM57_2273 DM57_2275 PF09550 DM57_2275 DM57_2276 PF00455 DM57_2276 DM57_2276 PF08220 DeoR-like helix-turn-helix domain DM57_2277 PF01019 Gamma-glutamyltranspeptidase DM57_228 PF14083 DM57_228 DM57_2280 PF00270 DEAD/DEAH box helicase DM57_2280 PF00271 Helicase conserved C-terminal domain DM57_2281 PF00034 Cytochrome c DM57_2282 PF00034 Cytochrome c DM57_2283 PF05425 DM57_2283 DM57_2284 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM57_2284 PF13378 Enolase C-terminal domain-like DM57_2285 PF04828 Glutathione-dependent formaldehyde-activating enzyme DM57_2286 PF14302 DM57_2286 DM57_2287 PF00512 His Kinase A (phospho-acceptor) domain DM57_2287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2287 PF03707 DM57_2287 DM57_2288 PF00149 Calcineurin-like phosphoesterase DM57_2288 PF16656 DM57_2288 DM57_2289 PF00072 Response regulator receiver domain DM57_2289 PF13487 HD domain DM57_229 PF11226 DM57_229 DM57_2290 PF13628 DM57_2290 DM57_2291 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_2291 PF08447 PAS fold DM57_2292 PF01527 Transposase DM57_2293 PF13276 DM57_2293 DM57_2293 PF13683 DM57_2293 DM57_2295 PF03544 Gram-negative bacterial TonB protein C-terminal DM57_2296 PF10696 DM57_2296 DM57_2297 PF04932 DM57_2297 DM57_2297 PF11846 DM57_2297 DM57_2297 PF15864 DM57_2297 DM57_2298 PF00114 Pilin (bacterial filament) DM57_2298 PF07963 Prokaryotic N-terminal methylation motif DM57_2299 PF03741 DM57_2299 DM57_23 PF00733 Asparagine synthase DM57_230 PF10086 DM57_230 DM57_2300 PF00549 CoA-ligase DM57_2300 PF02629 CoA binding domain DM57_2301 PF00549 CoA-ligase DM57_2301 PF08442 ATP-grasp domain DM57_2302 PF11136 DM57_2302 DM57_2303 PF02631 RecX family DM57_2304 PF00154 recA bacterial DNA recombination protein DM57_2305 PF00072 Response regulator receiver domain DM57_2305 PF00486 Transcriptional regulatory protein, C terminal DM57_2306 PF00512 His Kinase A (phospho-acceptor) domain DM57_2306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2306 PF08521 DM57_2306 DM57_2307 PF00083 Sugar (and other) transporter DM57_231 PF00356 Bacterial regulatory proteins, lacI family DM57_231 PF13377 Periplasmic binding protein-like domain DM57_2310 PF13276 DM57_2310 DM57_2310 PF13683 DM57_2310 DM57_2311 PF01527 Transposase DM57_2312 PF01967 MoaC family DM57_2313 PF01435 Peptidase family M48 DM57_2314 PF11161 DM57_2314 DM57_2315 PF00561 alpha/beta hydrolase fold DM57_2316 PF13474 SnoaL-like domain DM57_2317 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_2318 PF10276 Zinc-finger domain DM57_2319 PF01063 Aminotransferase class IV DM57_2320 PF03591 DM57_2320 DM57_2321 PF05437 DM57_2321 DM57_2322 PF00162 Phosphoglycerate kinase DM57_2323 PF00224 Pyruvate kinase, barrel domain DM57_2323 PF02887 Pyruvate kinase, alpha/beta domain DM57_2324 PF01116 Fructose-bisphosphate aldolase class-II DM57_2325 PF01259 SAICAR synthetase DM57_2326 PF00731 AIR carboxylase DM57_2327 PF02222 ATP-grasp domain DM57_2328 PF01300 Telomere recombination DM57_2328 PF03481 Putative GTP-binding controlling metal-binding DM57_2329 PF00657 GDSL-like Lipase/Acylhydrolase DM57_2332 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DM57_2333 PF00072 Response regulator receiver domain DM57_2333 PF00486 Transcriptional regulatory protein, C terminal DM57_2334 PF00512 His Kinase A (phospho-acceptor) domain DM57_2334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2335 PF13180 PDZ domain DM57_2335 PF13365 Trypsin-like peptidase domain DM57_2336 PF13620 Carboxypeptidase regulatory-like domain DM57_2337 PF04248 Domain of unknown function (DUF427) DM57_2338 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) DM57_2339 PF00440 Bacterial regulatory proteins, tetR family DM57_2339 PF08361 MAATS-type transcriptional repressor, C-terminal region DM57_234 PF07690 Major Facilitator Superfamily DM57_2340 PF16576 DM57_2340 DM57_2341 PF00873 AcrB/AcrD/AcrF family DM57_2342 PF02321 Outer membrane efflux protein DM57_2346 PF13276 DM57_2346 DM57_2346 PF13683 DM57_2346 DM57_2347 PF01527 Transposase DM57_2349 PF01965 DJ-1/PfpI family DM57_2349 PF12833 Helix-turn-helix domain DM57_235 PF00294 pfkB family carbohydrate kinase DM57_2350 PF00107 Zinc-binding dehydrogenase DM57_2350 PF08240 Alcohol dehydrogenase GroES-like domain DM57_2351 PF00756 Putative esterase DM57_2352 PF00950 DM57_2352 DM57_2353 PF00005 ABC transporter DM57_2354 PF01297 Periplasmic solute binding protein family DM57_2355 PF01475 Ferric uptake regulator family DM57_2356 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_2357 PF00294 pfkB family carbohydrate kinase DM57_2358 PF08013 Tagatose 6 phosphate kinase DM57_2359 PF01547 Bacterial extracellular solute-binding protein DM57_236 PF01261 Xylose isomerase-like TIM barrel DM57_2360 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2361 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2362 PF13419 Haloacid dehalogenase-like hydrolase DM57_2363 PF00005 ABC transporter DM57_2363 PF08402 TOBE domain DM57_2364 PF12710 haloacid dehalogenase-like hydrolase DM57_2365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2365 PF03466 LysR substrate binding domain DM57_2366 PF00144 Beta-lactamase DM57_2367 PF07690 Major Facilitator Superfamily DM57_2368 PF04198 Putative sugar-binding domain DM57_2369 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM57_2369 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM57_237 PF13630 DM57_237 DM57_2372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2372 PF03466 LysR substrate binding domain DM57_2373 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_2373 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_2373 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_2374 PF00171 Aldehyde dehydrogenase family DM57_2375 PF02558 Ketopantoate reductase PanE/ApbA DM57_2375 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM57_2376 PF07690 Major Facilitator Superfamily DM57_2377 PF03301 Tryptophan 2,3-dioxygenase DM57_2378 PF00266 Aminotransferase class-V DM57_2379 PF04199 Putative cyclase DM57_238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_238 PF03466 LysR substrate binding domain DM57_2380 PF01613 Flavin reductase like domain DM57_2381 PF01037 AsnC family DM57_2381 PF13412 Winged helix-turn-helix DNA-binding DM57_2382 PF01625 Peptide methionine sulfoxide reductase DM57_2383 PF01904 Protein of unknown function DUF72 DM57_2384 PF02353 Mycolic acid cyclopropane synthetase DM57_2385 PF01243 Pyridoxamine 5'-phosphate oxidase DM57_2385 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DM57_2386 PF00899 ThiF family DM57_2388 PF02678 Pirin DM57_2388 PF05726 Pirin C-terminal cupin domain DM57_2389 PF00892 EamA-like transporter family DM57_239 PF03601 DM57_239 DM57_2390 PF01520 N-acetylmuramoyl-L-alanine amidase DM57_2390 PF11741 AMIN domain DM57_2391 PF02367 Uncharacterised P-loop hydrolase UPF0079 DM57_2392 PF08331 DM57_2392 DM57_2392 PF13484 DM57_2392 DM57_2393 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DM57_2394 PF00589 Phage integrase family DM57_2394 PF02899 Phage integrase, N-terminal SAM-like domain DM57_2395 PF00501 AMP-binding enzyme DM57_2395 PF13193 AMP-binding enzyme C-terminal domain DM57_2396 PF04073 Aminoacyl-tRNA editing domain DM57_2397 PF02660 DM57_2397 DM57_2398 PF04461 Protein of unknown function (DUF520) DM57_2399 PF01565 FAD binding domain DM57_2399 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DM57_24 PF13471 DM57_24 DM57_240 PF00571 CBS domain DM57_240 PF00654 Voltage gated chloride channel DM57_2400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM57_2400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM57_2401 PF12112 Protein of unknown function (DUF3579) DM57_2402 PF01649 Ribosomal protein S20 DM57_2403 PF03023 DM57_2403 DM57_2404 PF13369 DM57_2404 DM57_2404 PF13371 Tetratricopeptide repeat DM57_2405 PF00106 short chain dehydrogenase DM57_2406 PF05598 DM57_2406 DM57_2406 PF13751 DM57_2406 DM57_2407 PF00303 Thymidylate synthase DM57_2408 PF00158 Sigma-54 interaction domain DM57_2408 PF02954 Bacterial regulatory protein, Fis family DM57_241 PF00440 Bacterial regulatory proteins, tetR family DM57_241 PF13977 Bacterial transcriptional repressor DM57_2412 PF00158 Sigma-54 interaction domain DM57_2412 PF02954 Bacterial regulatory protein, Fis family DM57_2413 PF00186 Dihydrofolate reductase DM57_2414 PF05598 DM57_2414 DM57_2414 PF13751 DM57_2414 DM57_2415 PF01523 Putative modulator of DNA gyrase DM57_2416 PF04751 Protein of unknown function (DUF615) DM57_2417 PF00994 Probable molybdopterin binding domain DM57_2418 PF00929 Exonuclease DM57_2419 PF01435 Peptidase family M48 DM57_2419 PF16491 DM57_2419 DM57_242 PF16576 DM57_242 DM57_2420 PF03193 Protein of unknown function, DUF258 DM57_2422 PF03186 DM57_2422 DM57_2423 PF00293 NUDIX domain DM57_2425 PF13527 Acetyltransferase (GNAT) domain DM57_2426 PF01245 Ribosomal protein L19 DM57_2427 PF01746 tRNA (Guanine-1)-methyltransferase DM57_2428 PF01782 RimM N-terminal domain DM57_2428 PF05239 PRC-barrel domain DM57_2429 PF00886 Ribosomal protein S16 DM57_243 PF00873 AcrB/AcrD/AcrF family DM57_2432 PF05154 DM57_2432 DM57_2433 PF04055 Radical SAM superfamily DM57_2434 PF01037 AsnC family DM57_2434 PF13412 Winged helix-turn-helix DNA-binding DM57_2435 PF01266 FAD dependent oxidoreductase DM57_2438 PF00766 Electron transfer flavoprotein FAD-binding domain DM57_2438 PF01012 Electron transfer flavoprotein domain DM57_2439 PF01012 Electron transfer flavoprotein domain DM57_244 PF02321 Outer membrane efflux protein DM57_2440 PF03180 NLPA lipoprotein DM57_2441 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2442 PF00005 ABC transporter DM57_2442 PF09383 NIL domain DM57_2443 PF12146 Putative lysophospholipase DM57_2444 PF00850 Histone deacetylase domain DM57_2445 PF13406 Transglycosylase SLT domain DM57_2446 PF00291 Pyridoxal-phosphate dependent enzyme DM57_2447 PF12836 Helix-hairpin-helix motif DM57_2448 PF01370 NAD dependent epimerase/dehydratase family DM57_245 PF13411 MerR HTH family regulatory protein DM57_2450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DM57_2450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DM57_2450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DM57_2451 PF13432 Tetratricopeptide repeat DM57_2452 PF06305 DM57_2452 DM57_2453 PF05598 DM57_2453 DM57_2453 PF13751 DM57_2453 DM57_2454 PF00216 Bacterial DNA-binding protein DM57_2455 PF00575 S1 RNA binding domain DM57_2456 PF02224 Cytidylate kinase DM57_2457 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM57_2458 PF00800 Prephenate dehydratase DM57_2458 PF01817 Chorismate mutase type II DM57_2458 PF01842 ACT domain DM57_2459 PF00266 Aminotransferase class-V DM57_2460 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) DM57_2461 PF00521 DNA gyrase/topoisomerase IV, subunit A DM57_2461 PF03989 DNA gyrase C-terminal domain, beta-propeller DM57_2462 PF00691 OmpA family DM57_2463 PF13489 Methyltransferase domain DM57_2464 PF13419 Haloacid dehalogenase-like hydrolase DM57_2465 PF13276 DM57_2465 DM57_2465 PF13683 DM57_2465 DM57_2466 PF01527 Transposase DM57_2468 PF00398 Ribosomal RNA adenine dimethylase DM57_247 PF13276 DM57_247 DM57_247 PF13683 DM57_247 DM57_2470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2470 PF12727 PBP superfamily domain DM57_2471 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin DM57_2472 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DM57_2472 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM57_2473 PF00384 Molybdopterin oxidoreductase DM57_2473 PF01568 Molydopterin dinucleotide binding domain DM57_2473 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM57_2473 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM57_2473 PF12838 4Fe-4S dicluster domain DM57_2473 PF13510 2Fe-2S iron-sulfur cluster binding domain DM57_2474 PF11390 DM57_2474 DM57_2475 PF01494 FAD binding domain DM57_2476 PF00515 Tetratricopeptide repeat DM57_2476 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_2476 PF07719 Tetratricopeptide repeat DM57_2476 PF13424 Tetratricopeptide repeat DM57_2476 PF13432 Tetratricopeptide repeat DM57_2476 PF14559 Tetratricopeptide repeat DM57_2477 PF00083 Sugar (and other) transporter DM57_2478 PF07722 Peptidase C26 DM57_2479 PF01425 Amidase DM57_2480 PF02600 Disulfide bond formation protein DsbB DM57_2481 PF02625 XdhC and CoxI family DM57_2481 PF13478 XdhC Rossmann domain DM57_2482 PF00962 Adenosine/AMP deaminase DM57_2483 PF00860 Permease family DM57_2484 PF01979 Amidohydrolase family DM57_2485 PF01169 DM57_2485 DM57_2486 PF13590 Domain of unknown function (DUF4136) DM57_2487 PF01433 Peptidase family M1 DM57_2487 PF11940 Domain of unknown function (DUF3458) DM57_2487 PF17432 DM57_2487 DM57_2488 PF01717 Cobalamin-independent synthase, Catalytic domain DM57_2488 PF08267 Cobalamin-independent synthase, N-terminal domain DM57_2489 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2489 PF03466 LysR substrate binding domain DM57_249 PF00710 Asparaginase DM57_2490 PF00316 Fructose-1-6-bisphosphatase DM57_2495 PF04226 DM57_2495 DM57_2498 PF00593 TonB dependent receptor DM57_2498 PF07715 TonB-dependent Receptor Plug Domain DM57_2499 PF11162 DM57_2499 DM57_250 PF07769 DM57_250 DM57_2501 PF01817 Chorismate mutase type II DM57_2504 PF01527 Transposase DM57_2505 PF13356 Domain of unknown function (DUF4102) DM57_2507 PF13276 DM57_2507 DM57_2507 PF13683 DM57_2507 DM57_2508 PF01527 Transposase DM57_2509 PF00849 RNA pseudouridylate synthase DM57_2510 PF00180 Isocitrate/isopropylmalate dehydrogenase DM57_2511 PF07731 Multicopper oxidase DM57_2511 PF07732 Multicopper oxidase DM57_2516 PF12840 Helix-turn-helix domain DM57_2517 PF03061 Thioesterase superfamily DM57_2518 PF00206 Lyase DM57_2518 PF10415 Fumarase C C-terminus DM57_2519 PF13276 DM57_2519 DM57_2519 PF13683 DM57_2519 DM57_252 PF04366 DM57_252 DM57_2520 PF01527 Transposase DM57_2521 PF01554 MatE DM57_2522 PF13275 S4 domain DM57_2524 PF13317 DM57_2524 DM57_2525 PF05981 DM57_2525 DM57_2528 PF00037 4Fe-4S binding domain DM57_2528 PF11953 Domain of unknown function (DUF3470) DM57_2528 PF12800 4Fe-4S binding domain DM57_2529 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DM57_253 PF00534 Glycosyl transferases group 1 DM57_253 PF13439 Glycosyltransferase Family 4 DM57_2530 PF02589 Uncharacterised ACR, YkgG family COG1556 DM57_2531 PF16980 DM57_2531 DM57_2532 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM57_2532 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM57_2533 PF02646 DM57_2533 DM57_2534 PF00583 Acetyltransferase (GNAT) family DM57_2536 PF00994 Probable molybdopterin binding domain DM57_2536 PF03453 MoeA N-terminal region (domain I and II) DM57_2536 PF03454 MoeA C-terminal region (domain IV) DM57_2537 PF12804 MobA-like NTP transferase domain DM57_2538 PF04055 Radical SAM superfamily DM57_2538 PF06463 Molybdenum Cofactor Synthesis C DM57_2538 PF13394 4Fe-4S single cluster domain DM57_2539 PF00575 S1 RNA binding domain DM57_2539 PF10150 Ribonuclease E/G family DM57_254 PF13304 AAA domain DM57_2540 PF00849 RNA pseudouridylate synthase DM57_2540 PF01479 S4 domain DM57_2542 PF00355 Rieske [2Fe-2S] domain DM57_2543 PF01343 Peptidase family S49 DM57_2545 PF02545 Maf-like protein DM57_2546 PF02620 DM57_2546 DM57_2547 PF01783 Ribosomal L32p protein family DM57_2548 PF02504 Fatty acid synthesis protein DM57_2549 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DM57_2549 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM57_255 PF00924 Mechanosensitive ion channel DM57_2550 PF00698 Acyl transferase domain DM57_2551 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_2552 PF00550 Phosphopantetheine attachment site DM57_2553 PF00109 Beta-ketoacyl synthase, N-terminal domain DM57_2553 PF02801 Beta-ketoacyl synthase, C-terminal domain DM57_2555 PF04542 Sigma-70 region 2 DM57_2555 PF08281 Sigma-70, region 4 DM57_2556 PF03872 Anti sigma-E protein RseA, N-terminal domain DM57_2557 PF03888 MucB/RseB family DM57_2557 PF17188 DM57_2557 DM57_2558 PF13180 PDZ domain DM57_2558 PF13365 Trypsin-like peptidase domain DM57_2559 PF05768 Glutaredoxin-like domain (DUF836) DM57_2560 PF00009 Elongation factor Tu GTP binding domain DM57_2560 PF00679 Elongation factor G C-terminus DM57_2560 PF03144 Elongation factor Tu domain 2 DM57_2560 PF06421 GTP-binding protein LepA C-terminus DM57_2561 PF00717 Peptidase S24-like DM57_2561 PF10502 Signal peptidase, peptidase S26 DM57_2562 PF00035 Double-stranded RNA binding motif DM57_2562 PF14622 Ribonuclease-III-like DM57_2563 PF01926 50S ribosome-binding GTPase DM57_2563 PF07650 KH domain DM57_2564 PF02565 Recombination protein O C terminal DM57_2564 PF11967 Recombination protein O N terminal DM57_2565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DM57_2566 PF01648 4'-phosphopantetheinyl transferase superfamily DM57_2567 PF00933 Glycosyl hydrolase family 3 N terminal domain DM57_2568 PF00072 Response regulator receiver domain DM57_2568 PF00158 Sigma-54 interaction domain DM57_2568 PF02954 Bacterial regulatory protein, Fis family DM57_2569 PF01132 Elongation factor P (EF-P) OB domain DM57_2569 PF08207 Elongation factor P (EF-P) KOW-like domain DM57_2569 PF09285 Elongation factor P, C-terminal DM57_257 PF12796 Ankyrin repeats (3 copies) DM57_2570 PF10093 DM57_2570 DM57_2571 PF01541 GIY-YIG catalytic domain DM57_2571 PF02151 UvrB/uvrC motif DM57_2571 PF08459 UvrC Helix-hairpin-helix N-terminal DM57_2571 PF14520 Helix-hairpin-helix domain DM57_2572 PF01066 CDP-alcohol phosphatidyltransferase DM57_2576 PF13185 GAF domain DM57_2577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2577 PF03466 LysR substrate binding domain DM57_2578 PF02678 Pirin DM57_2578 PF05726 Pirin C-terminal cupin domain DM57_2579 PF13673 Acetyltransferase (GNAT) domain DM57_258 PF01026 TatD related DNase DM57_2580 PF09678 DM57_2580 DM57_2581 PF04314 Protein of unknown function (DUF461) DM57_2582 PF02630 SCO1/SenC DM57_2583 PF02358 Trehalose-phosphatase DM57_2584 PF00982 Glycosyltransferase family 20 DM57_2585 PF00005 ABC transporter DM57_2585 PF00664 ABC transporter transmembrane region DM57_2586 PF00534 Glycosyl transferases group 1 DM57_2586 PF13439 Glycosyltransferase Family 4 DM57_2588 PF01266 FAD dependent oxidoreductase DM57_2589 PF13458 Periplasmic binding protein DM57_259 PF00583 Acetyltransferase (GNAT) family DM57_2591 PF13276 DM57_2591 DM57_2591 PF13683 DM57_2591 DM57_2592 PF01527 Transposase DM57_2593 PF03706 DM57_2593 DM57_2594 PF04794 YdjC-like protein DM57_2595 PF04055 Radical SAM superfamily DM57_2596 PF13506 Glycosyl transferase family 21 DM57_2597 PF00296 Luciferase-like monooxygenase DM57_2599 PF08543 Phosphomethylpyrimidine kinase DM57_26 PF12833 Helix-turn-helix domain DM57_260 PF13177 DNA polymerase III, delta subunit DM57_2600 PF04185 Phosphoesterase family DM57_2600 PF05506 DM57_2600 DM57_2601 PF01527 Transposase DM57_2603 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2604 PF00005 ABC transporter DM57_2605 PF12833 Helix-turn-helix domain DM57_2606 PF00202 Aminotransferase class-III DM57_2607 PF04958 Arginine N-succinyltransferase beta subunit DM57_2608 PF04958 Arginine N-succinyltransferase beta subunit DM57_2609 PF00171 Aldehyde dehydrogenase family DM57_261 PF02223 Thymidylate kinase DM57_2610 PF04996 Succinylarginine dihydrolase DM57_2611 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DM57_2613 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_2614 PF00487 DM57_2614 DM57_2615 PF03626 DM57_2615 DM57_2619 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM57_2619 PF06481 COX Aromatic Rich Motif DM57_262 PF02618 YceG-like family DM57_2620 PF01814 Hemerythrin HHE cation binding domain DM57_2621 PF02082 Transcriptional regulator DM57_2622 PF10006 DM57_2622 DM57_2623 PF01883 Domain of unknown function DUF59 DM57_2624 PF01592 NifU-like N terminal domain DM57_2625 PF00266 Aminotransferase class-V DM57_2626 PF01458 Uncharacterized protein family (UPF0051) DM57_2627 PF00005 ABC transporter DM57_2629 PF05940 DM57_2629 DM57_263 PF01571 Aminomethyltransferase folate-binding domain DM57_2630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_2631 PF04055 Radical SAM superfamily DM57_2631 PF06969 HemN C-terminal domain DM57_2633 PF00027 Cyclic nucleotide-binding domain DM57_2633 PF13545 Crp-like helix-turn-helix domain DM57_2634 PF03060 Nitronate monooxygenase DM57_2635 PF01136 DM57_2635 DM57_2636 PF01136 DM57_2636 DM57_2637 PF02036 SCP-2 sterol transfer family DM57_2638 PF08859 DM57_2638 DM57_2639 PF04055 Radical SAM superfamily DM57_2639 PF13353 4Fe-4S single cluster domain DM57_264 PF05742 DM57_264 DM57_2640 PF13597 Anaerobic ribonucleoside-triphosphate reductase DM57_2641 PF13597 Anaerobic ribonucleoside-triphosphate reductase DM57_2642 PF05940 DM57_2642 DM57_2644 PF01883 Domain of unknown function DUF59 DM57_2645 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM57_2646 PF00487 DM57_2646 DM57_2647 PF00875 DNA photolyase DM57_2647 PF03441 FAD binding domain of DNA photolyase DM57_2648 PF01583 Adenylylsulphate kinase DM57_2649 PF00196 Bacterial regulatory proteins, luxR family DM57_2649 PF03472 Autoinducer binding domain DM57_265 PF13673 Acetyltransferase (GNAT) domain DM57_2650 PF12146 Putative lysophospholipase DM57_2651 PF01648 4'-phosphopantetheinyl transferase superfamily DM57_2652 PF00221 Aromatic amino acid lyase DM57_2653 PF00392 Bacterial regulatory proteins, gntR family DM57_2653 PF07702 UTRA domain DM57_2654 PF01175 Urocanase DM57_2654 PF17391 DM57_2654 DM57_2654 PF17392 DM57_2654 DM57_2655 PF05962 HutD DM57_2656 PF01979 Amidohydrolase family DM57_2657 PF01979 Amidohydrolase family DM57_2658 PF05013 N-formylglutamate amidohydrolase DM57_2659 PF07722 Peptidase C26 DM57_266 PF07859 alpha/beta hydrolase fold DM57_2660 PF00120 Glutamine synthetase, catalytic domain DM57_2662 PF13276 DM57_2662 DM57_2662 PF13683 DM57_2662 DM57_2665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2665 PF03466 LysR substrate binding domain DM57_2666 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DM57_2666 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DM57_2667 PF06073 DM57_2667 DM57_2668 PF01507 Phosphoadenosine phosphosulfate reductase family DM57_2669 PF01507 Phosphoadenosine phosphosulfate reductase family DM57_267 PF00107 Zinc-binding dehydrogenase DM57_267 PF16884 DM57_267 DM57_2670 PF00009 Elongation factor Tu GTP binding domain DM57_2671 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_2672 PF01903 CbiX DM57_2673 PF03739 DM57_2673 DM57_2674 PF03739 DM57_2674 DM57_2675 PF00883 Cytosol aminopeptidase family, catalytic domain DM57_2675 PF02789 Cytosol aminopeptidase family, N-terminal domain DM57_2676 PF04364 DNA polymerase III chi subunit, HolC DM57_2677 PF10667 DM57_2677 DM57_2678 PF00034 Cytochrome c DM57_2679 PF05598 DM57_2679 DM57_2679 PF13751 DM57_2679 DM57_268 PF03061 Thioesterase superfamily DM57_2680 PF00920 Dehydratase family DM57_2681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2681 PF03466 LysR substrate binding domain DM57_2682 PF01790 DM57_2682 DM57_2683 PF04402 Protein of unknown function (DUF541) DM57_2684 PF01878 EVE domain DM57_2685 PF05164 Cell division protein ZapA DM57_2687 PF00593 TonB dependent receptor DM57_2687 PF07715 TonB-dependent Receptor Plug Domain DM57_2688 PF01032 FecCD transport family DM57_2689 PF00005 ABC transporter DM57_269 PF07876 Stress responsive A/B Barrel Domain DM57_2690 PF02277 Phosphoribosyltransferase DM57_2691 PF02654 DM57_2691 DM57_2692 PF00300 Histidine phosphatase superfamily (branch 1) DM57_2694 PF01497 Periplasmic binding protein DM57_2695 PF00155 Aminotransferase class I and II DM57_2696 PF03186 DM57_2696 DM57_2697 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DM57_2698 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM57_2698 PF07685 CobB/CobQ-like glutamine amidotransferase domain DM57_2699 PF07681 DM57_2699 DM57_27 PF13407 Periplasmic binding protein domain DM57_2700 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM57_2701 PF02261 Aspartate decarboxylase DM57_2702 PF02569 Pantoate-beta-alanine ligase DM57_2703 PF02616 ScpA/B protein DM57_2704 PF11943 DM57_2704 DM57_2705 PF01103 Surface antigen DM57_2706 PF04357 DM57_2706 DM57_2708 PF00891 O-methyltransferase DM57_2709 PF01588 Putative tRNA binding domain DM57_2709 PF09334 tRNA synthetases class I (M) DM57_271 PF00108 Thiolase, N-terminal domain DM57_271 PF02803 Thiolase, C-terminal domain DM57_2710 PF00691 OmpA family DM57_2710 PF13441 DM57_2710 DM57_2711 PF01883 Domain of unknown function DUF59 DM57_2711 PF10609 ParA/MinD ATPase like DM57_2712 PF00080 Copper/zinc superoxide dismutase (SODC) DM57_2713 PF00692 dUTPase DM57_2714 PF01276 Orn/Lys/Arg decarboxylase, major domain DM57_2714 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DM57_2714 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DM57_2715 PF07007 Protein of unknown function (DUF1311) DM57_2716 PF13419 Haloacid dehalogenase-like hydrolase DM57_2717 PF00206 Lyase DM57_2717 PF14698 Argininosuccinate lyase C-terminal DM57_2718 PF00577 Outer membrane usher protein DM57_2718 PF13953 PapC C-terminal domain DM57_2719 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM57_272 PF00857 Isochorismatase family DM57_2720 PF05229 DM57_2720 DM57_2721 PF05229 DM57_2721 DM57_2722 PF13560 Helix-turn-helix domain DM57_2723 PF08241 Methyltransferase domain DM57_2725 PF00311 Phosphoenolpyruvate carboxylase DM57_2726 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DM57_2726 PF03900 Porphobilinogen deaminase, C-terminal domain DM57_2727 PF02602 Uroporphyrinogen-III synthase HemD DM57_2727 PF04375 DM57_2727 DM57_2728 PF07219 DM57_2728 DM57_2728 PF13424 Tetratricopeptide repeat DM57_2729 PF07690 Major Facilitator Superfamily DM57_273 PF00378 Enoyl-CoA hydratase/isomerase family DM57_273 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM57_273 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM57_2730 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_2731 PF00171 Aldehyde dehydrogenase family DM57_2732 PF00719 Inorganic pyrophosphatase DM57_2734 PF04339 DM57_2734 DM57_2735 PF00795 Carbon-nitrogen hydrolase DM57_2735 PF02540 NAD synthase DM57_2736 PF00543 Nitrogen regulatory protein P-II DM57_2737 PF13609 Gram-negative porin DM57_2738 PF00005 ABC transporter DM57_2739 PF00528 Binding-protein-dependent transport system inner membrane component DM57_274 PF00501 AMP-binding enzyme DM57_274 PF13193 AMP-binding enzyme C-terminal domain DM57_2740 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2741 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_2744 PF13801 Heavy-metal resistance DM57_2745 PF00072 Response regulator receiver domain DM57_2745 PF00486 Transcriptional regulatory protein, C terminal DM57_2746 PF00512 His Kinase A (phospho-acceptor) domain DM57_2746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2748 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2749 PF00005 ABC transporter DM57_2749 PF09821 DM57_2749 DM57_275 PF02696 DM57_275 DM57_2750 PF13276 DM57_2750 DM57_2750 PF13683 DM57_2750 DM57_2751 PF01527 Transposase DM57_2752 PF08816 Inhibitor of vertebrate lysozyme (Ivy) DM57_2754 PF00768 D-alanyl-D-alanine carboxypeptidase DM57_2755 PF03974 Ecotin DM57_2759 PF01161 Phosphatidylethanolamine-binding protein DM57_276 PF01641 SelR domain DM57_2760 PF07690 Major Facilitator Superfamily DM57_2761 PF13488 DM57_2761 DM57_2762 PF13521 AAA domain DM57_2763 PF00982 Glycosyltransferase family 20 DM57_2767 PF01964 ThiC family DM57_2767 PF13667 ThiC-associated domain DM57_2769 PF06764 Protein of unknown function (DUF1223) DM57_277 PF04279 DM57_277 DM57_2770 PF01292 Prokaryotic cytochrome b561 DM57_2771 PF00174 Oxidoreductase molybdopterin binding domain DM57_2772 PF00892 EamA-like transporter family DM57_2773 PF07690 Major Facilitator Superfamily DM57_2774 PF03988 DM57_2774 DM57_2778 PF00005 ABC transporter DM57_2778 PF08402 TOBE domain DM57_2779 PF00528 Binding-protein-dependent transport system inner membrane component DM57_278 PF01722 BolA-like protein DM57_2781 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2782 PF13343 Bacterial extracellular solute-binding protein DM57_2783 PF00356 Bacterial regulatory proteins, lacI family DM57_2783 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DM57_2787 PF00990 GGDEF domain DM57_2788 PF07040 DM57_2788 DM57_2789 PF09948 DM57_2789 DM57_279 PF13616 PPIC-type PPIASE domain DM57_2790 PF04299 Putative FMN-binding domain DM57_2791 PF00155 Aminotransferase class I and II DM57_2791 PF00392 Bacterial regulatory proteins, gntR family DM57_2792 PF01037 AsnC family DM57_2792 PF13412 Winged helix-turn-helix DNA-binding DM57_2793 PF01380 SIS domain DM57_2793 PF13537 Glutamine amidotransferase domain DM57_2796 PF09998 DM57_2796 DM57_2799 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_28 PF00005 ABC transporter DM57_280 PF13527 Acetyltransferase (GNAT) domain DM57_2802 PF06073 DM57_2802 DM57_2803 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DM57_2803 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DM57_2804 PF11174 DM57_2804 DM57_2805 PF00155 Aminotransferase class I and II DM57_2805 PF00392 Bacterial regulatory proteins, gntR family DM57_2806 PF00011 Hsp20/alpha crystallin family DM57_2807 PF00011 Hsp20/alpha crystallin family DM57_2809 PF00821 Phosphoenolpyruvate carboxykinase DM57_2809 PF17297 DM57_2809 DM57_281 PF02769 AIR synthase related protein, C-terminal domain DM57_281 PF13507 CobB/CobQ-like glutamine amidotransferase domain DM57_2810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM57_2810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM57_2811 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2811 PF03466 LysR substrate binding domain DM57_2812 PF03817 DM57_2812 DM57_2813 PF03818 DM57_2813 DM57_2815 PF16957 DM57_2815 DM57_2816 PF06857 DM57_2816 DM57_2817 PF01039 Carboxyl transferase domain DM57_2818 PF06833 Malonate decarboxylase gamma subunit (MdcE) DM57_2819 PF10620 DM57_2819 DM57_282 PF01266 FAD dependent oxidoreductase DM57_2820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DM57_2822 PF13091 PLD-like domain DM57_2823 PF12146 Putative lysophospholipase DM57_2824 PF13417 Glutathione S-transferase, N-terminal domain DM57_2825 PF13276 DM57_2825 DM57_2825 PF13683 DM57_2825 DM57_2826 PF01527 Transposase DM57_2828 PF00083 Sugar (and other) transporter DM57_2829 PF02694 DM57_2829 DM57_283 PF01256 Carbohydrate kinase DM57_283 PF03853 YjeF-related protein N-terminus DM57_2830 PF00929 Exonuclease DM57_2831 PF00075 RNase H DM57_2832 PF08241 Methyltransferase domain DM57_2833 PF00753 Metallo-beta-lactamase superfamily DM57_2833 PF16123 DM57_2833 DM57_2834 PF01464 Transglycosylase SLT domain DM57_2834 PF01476 LysM domain DM57_2835 PF07690 Major Facilitator Superfamily DM57_2837 PF12625 DM57_2837 DM57_2837 PF12833 Helix-turn-helix domain DM57_2838 PF00117 Glutamine amidotransferase class-I DM57_2838 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DM57_2839 PF01810 DM57_2839 DM57_284 PF00342 Phosphoglucose isomerase DM57_2840 PF02142 MGS-like domain DM57_2840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM57_2840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DM57_2841 PF01272 Transcription elongation factor, GreA/GreB, C-term DM57_2841 PF03449 Transcription elongation factor, N-terminal DM57_2842 PF13664 DM57_2842 DM57_2843 PF01985 CRS1 / YhbY (CRM) domain DM57_2844 PF01728 FtsJ-like methyltransferase DM57_2845 PF00004 ATPase family associated with various cellular activities (AAA) DM57_2845 PF01434 Peptidase family M41 DM57_2845 PF06480 FtsH Extracellular DM57_2846 PF00809 Pterin binding enzyme DM57_2847 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM57_2847 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM57_2847 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM57_2847 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM57_2848 PF12849 PBP superfamily domain DM57_2849 PF00528 Binding-protein-dependent transport system inner membrane component DM57_285 PF00005 ABC transporter DM57_2850 PF00528 Binding-protein-dependent transport system inner membrane component DM57_2851 PF00005 ABC transporter DM57_2852 PF01895 PhoU domain DM57_2853 PF00072 Response regulator receiver domain DM57_2853 PF00486 Transcriptional regulatory protein, C terminal DM57_2854 PF00512 His Kinase A (phospho-acceptor) domain DM57_2854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2854 PF11808 DM57_2854 DM57_2854 PF13188 PAS domain DM57_2855 PF02503 Polyphosphate kinase middle domain DM57_2855 PF13089 Polyphosphate kinase N-terminal domain DM57_2855 PF13090 Polyphosphate kinase C-terminal domain DM57_2856 PF02541 Ppx/GppA phosphatase family DM57_2858 PF14378 DM57_2858 DM57_286 PF13472 GDSL-like Lipase/Acylhydrolase family DM57_2864 PF10908 DM57_2864 DM57_2866 PF00300 Histidine phosphatase superfamily (branch 1) DM57_2867 PF13444 Acetyltransferase (GNAT) domain DM57_287 PF00639 PPIC-type PPIASE domain DM57_287 PF13624 SurA N-terminal domain DM57_2870 PF01554 MatE DM57_2871 PF10052 Protein of unknown function (DUF2288) DM57_2872 PF00501 AMP-binding enzyme DM57_2872 PF13193 AMP-binding enzyme C-terminal domain DM57_2874 PF01476 LysM domain DM57_2874 PF01551 Peptidase family M23 DM57_2876 PF01527 Transposase DM57_2877 PF13276 DM57_2877 DM57_2877 PF13683 DM57_2877 DM57_2880 PF13503 DM57_2880 DM57_2881 PF05488 PAAR motif DM57_2882 PF04072 Leucine carboxyl methyltransferase DM57_2882 PF13411 MerR HTH family regulatory protein DM57_2883 PF00155 Aminotransferase class I and II DM57_2883 PF00392 Bacterial regulatory proteins, gntR family DM57_2884 PF12893 Putative lumazine-binding DM57_2886 PF00128 Alpha amylase, catalytic domain DM57_2887 PF02446 4-alpha-glucanotransferase DM57_2888 PF00128 Alpha amylase, catalytic domain DM57_2888 PF11941 Domain of unknown function (DUF3459) DM57_2889 PF00128 Alpha amylase, catalytic domain DM57_2889 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DM57_2892 PF00128 Alpha amylase, catalytic domain DM57_2892 PF16657 DM57_2892 DM57_2893 PF00128 Alpha amylase, catalytic domain DM57_2893 PF11896 Domain of unknown function (DUF3416) DM57_2894 PF10503 Esterase PHB depolymerase DM57_2897 PF12891 Glycoside hydrolase family 44 DM57_2898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2898 PF03466 LysR substrate binding domain DM57_2899 PF00072 Response regulator receiver domain DM57_2899 PF00486 Transcriptional regulatory protein, C terminal DM57_29 PF02653 DM57_29 DM57_2900 PF13127 DM57_2900 DM57_2901 PF05666 DM57_2901 DM57_2903 PF00072 Response regulator receiver domain DM57_2903 PF00486 Transcriptional regulatory protein, C terminal DM57_2904 PF03895 YadA-like C-terminal region DM57_2904 PF05658 Head domain of trimeric autotransporter adhesin DM57_2904 PF05662 Coiled stalk of trimeric autotransporter adhesin DM57_2904 PF13018 DM57_2904 DM57_2905 PF00691 OmpA family DM57_2907 PF00816 H-NS histone family DM57_2909 PF02630 SCO1/SenC DM57_2911 PF00652 Ricin-type beta-trefoil lectin domain DM57_2911 PF09118 Domain of unknown function (DUF1929) DM57_2911 PF14200 Ricin-type beta-trefoil lectin domain-like DM57_2912 PF07859 alpha/beta hydrolase fold DM57_2914 PF05947 DM57_2914 DM57_2916 PF05488 PAAR motif DM57_2917 PF05954 Phage late control gene D protein (GPD) DM57_2917 PF10106 DM57_2917 DM57_2917 PF13296 DM57_2917 DM57_2918 PF13503 DM57_2918 DM57_2919 PF13276 DM57_2919 DM57_2919 PF13683 DM57_2919 DM57_292 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DM57_2920 PF01527 Transposase DM57_2922 PF01566 DM57_2922 DM57_2924 PF00816 H-NS histone family DM57_2925 PF04909 Amidohydrolase DM57_2926 PF07690 Major Facilitator Superfamily DM57_2927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2927 PF03466 LysR substrate binding domain DM57_2928 PF05229 DM57_2928 DM57_2929 PF05229 DM57_2929 DM57_2930 PF05229 DM57_2930 DM57_2931 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM57_2933 PF05229 DM57_2933 DM57_2934 PF00072 Response regulator receiver domain DM57_2934 PF00512 His Kinase A (phospho-acceptor) domain DM57_2934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2935 PF00072 Response regulator receiver domain DM57_2935 PF00196 Bacterial regulatory proteins, luxR family DM57_2936 PF02321 Outer membrane efflux protein DM57_2937 PF07690 Major Facilitator Superfamily DM57_2938 PF16576 DM57_2938 DM57_2939 PF07055 Enoyl reductase FAD binding domain DM57_2939 PF12241 Trans-2-enoyl-CoA reductase catalytic region DM57_2939 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DM57_294 PF00004 ATPase family associated with various cellular activities (AAA) DM57_294 PF02190 ATP-dependent protease La (LON) domain DM57_294 PF05362 Lon protease (S16) C-terminal proteolytic domain DM57_2940 PF04185 Phosphoesterase family DM57_2941 PF03150 Di-haem cytochrome c peroxidase DM57_2942 PF13539 D-alanyl-D-alanine carboxypeptidase DM57_2945 PF16998 DM57_2945 DM57_2946 PF00293 NUDIX domain DM57_2947 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM57_2947 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DM57_2949 PF02515 CoA-transferase family III DM57_295 PF06689 ClpX C4-type zinc finger DM57_295 PF07724 AAA domain (Cdc48 subfamily) DM57_295 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_2950 PF01411 tRNA synthetases class II (A) DM57_2950 PF02272 DHHA1 domain DM57_2950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM57_2951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2951 PF03466 LysR substrate binding domain DM57_2952 PF06779 DM57_2952 DM57_2953 PF01527 Transposase DM57_2954 PF13276 DM57_2954 DM57_2954 PF13683 DM57_2954 DM57_2959 PF00293 NUDIX domain DM57_296 PF00574 Clp protease DM57_2960 PF01906 Putative heavy-metal-binding DM57_2961 PF00465 Iron-containing alcohol dehydrogenase DM57_2962 PF03061 Thioesterase superfamily DM57_2963 PF02653 DM57_2963 DM57_2964 PF00005 ABC transporter DM57_2964 PF02653 DM57_2964 DM57_2964 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM57_2965 PF00005 ABC transporter DM57_2966 PF04962 KduI/IolB family DM57_2967 PF01261 Xylose isomerase-like TIM barrel DM57_2968 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_2968 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_2968 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_2969 PF00294 pfkB family carbohydrate kinase DM57_2969 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) DM57_297 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM57_297 PF05697 Bacterial trigger factor protein (TF) DM57_297 PF05698 Bacterial trigger factor protein (TF) C-terminus DM57_2970 PF00005 ABC transporter DM57_2971 PF02653 DM57_2971 DM57_2972 PF13407 Periplasmic binding protein domain DM57_2973 PF01380 SIS domain DM57_2973 PF01418 Helix-turn-helix domain, rpiR family DM57_2974 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM57_2974 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM57_2975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM57_2975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM57_2976 PF01206 Sulfurtransferase TusA DM57_2978 PF00072 Response regulator receiver domain DM57_2978 PF00486 Transcriptional regulatory protein, C terminal DM57_2979 PF01476 LysM domain DM57_2979 PF04773 FecR protein DM57_298 PF02595 Glycerate kinase family DM57_2980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_2980 PF05226 DM57_2980 DM57_2981 PF13590 Domain of unknown function (DUF4136) DM57_2982 PF00483 Nucleotidyl transferase DM57_2983 PF00133 tRNA synthetases class I (I, L, M and V) DM57_2983 PF08264 Anticodon-binding domain of tRNA DM57_2983 PF10458 Valyl tRNA synthetase tRNA binding arm DM57_2984 PF00580 UvrD/REP helicase N-terminal domain DM57_2984 PF13361 UvrD-like helicase C-terminal domain DM57_2985 PF01048 Phosphorylase superfamily DM57_2986 PF07690 Major Facilitator Superfamily DM57_2987 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_2987 PF12729 DM57_2987 DM57_2988 PF16576 DM57_2988 DM57_2989 PF07869 DM57_2989 DM57_299 PF12802 MarR family DM57_2990 PF04632 DM57_2990 DM57_2991 PF02321 Outer membrane efflux protein DM57_2992 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_2992 PF03466 LysR substrate binding domain DM57_2994 PF12850 Calcineurin-like phosphoesterase superfamily domain DM57_2995 PF01565 FAD binding domain DM57_2995 PF02913 FAD linked oxidases, C-terminal domain DM57_2996 PF09842 DM57_2996 DM57_2997 PF03358 NADPH-dependent FMN reductase DM57_2998 PF03631 DM57_2998 DM57_2999 PF06127 DM57_2999 DM57_3 PF00482 Type II secretion system (T2SS), protein F DM57_30 PF00107 Zinc-binding dehydrogenase DM57_30 PF08240 Alcohol dehydrogenase GroES-like domain DM57_300 PF02558 Ketopantoate reductase PanE/ApbA DM57_300 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM57_3000 PF00571 CBS domain DM57_3001 PF01553 Acyltransferase DM57_3001 PF07690 Major Facilitator Superfamily DM57_3002 PF01264 Chorismate synthase DM57_3004 PF13276 DM57_3004 DM57_3004 PF13683 DM57_3004 DM57_3005 PF01527 Transposase DM57_3006 PF13473 Cupredoxin-like domain DM57_3007 PF00149 Calcineurin-like phosphoesterase DM57_3008 PF04542 Sigma-70 region 2 DM57_3008 PF08281 Sigma-70, region 4 DM57_3009 PF13490 Putative zinc-finger DM57_301 PF00196 Bacterial regulatory proteins, luxR family DM57_3010 PF01250 Ribosomal protein S6 DM57_3012 PF01084 Ribosomal protein S18 DM57_3013 PF01281 Ribosomal protein L9, N-terminal domain DM57_3013 PF03948 Ribosomal protein L9, C-terminal domain DM57_3014 PF00772 DnaB-like helicase N terminal domain DM57_3014 PF03796 DnaB-like helicase C terminal domain DM57_3015 PF01865 Protein of unknown function DUF47 DM57_3016 PF01384 DM57_3016 DM57_3017 PF00877 NlpC/P60 family DM57_3018 PF02562 PhoH-like protein DM57_3018 PF13638 PIN domain DM57_3019 PF00578 AhpC/TSA family DM57_302 PF13609 Gram-negative porin DM57_3020 PF01522 Polysaccharide deacetylase DM57_3022 PF00551 Formyl transferase DM57_3022 PF02911 Formyl transferase, C-terminal domain DM57_3023 PF00535 Glycosyl transferase family 2 DM57_3024 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DM57_3025 PF00893 Small Multidrug Resistance protein DM57_3026 PF13231 DM57_3026 DM57_3027 PF04430 Protein of unknown function (DUF498/DUF598) DM57_3029 PF00742 Homoserine dehydrogenase DM57_3029 PF01842 ACT domain DM57_3029 PF03447 Homoserine dehydrogenase, NAD binding domain DM57_303 PF07690 Major Facilitator Superfamily DM57_3030 PF00291 Pyridoxal-phosphate dependent enzyme DM57_3030 PF14821 Threonine synthase N terminus DM57_3031 PF00994 Probable molybdopterin binding domain DM57_3031 PF03453 MoeA N-terminal region (domain I and II) DM57_3031 PF03454 MoeA C-terminal region (domain IV) DM57_3032 PF02597 ThiS family DM57_3033 PF02391 MoaE protein DM57_3035 PF02082 Transcriptional regulator DM57_3036 PF00004 ATPase family associated with various cellular activities (AAA) DM57_3036 PF02861 Clp amino terminal domain DM57_3036 PF07724 AAA domain (Cdc48 subfamily) DM57_3036 PF10431 C-terminal, D2-small domain, of ClpB protein DM57_3037 PF06078 Bacterial protein of unknown function (DUF937) DM57_3038 PF12836 Helix-hairpin-helix motif DM57_3039 PF13411 MerR HTH family regulatory protein DM57_304 PF00850 Histone deacetylase domain DM57_3040 PF02627 Carboxymuconolactone decarboxylase family DM57_3041 PF01554 MatE DM57_3043 PF01197 Ribosomal protein L31 DM57_3044 PF06167 Glucose-regulated metallo-peptidase M90 DM57_3045 PF07690 Major Facilitator Superfamily DM57_3046 PF13411 MerR HTH family regulatory protein DM57_3047 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM57_3047 PF07497 Rho termination factor, RNA-binding domain DM57_3047 PF07498 Rho termination factor, N-terminal domain DM57_3048 PF00085 Thioredoxin DM57_3049 PF12169 DNA polymerase III subunits gamma and tau domain III DM57_3049 PF12170 DNA polymerase III tau subunit V interacting with alpha DM57_3049 PF13177 DNA polymerase III, delta subunit DM57_305 PF13091 PLD-like domain DM57_3050 PF02575 YbaB/EbfC DNA-binding family DM57_3051 PF02132 RecR protein DM57_3051 PF13662 Toprim domain DM57_3052 PF02515 CoA-transferase family III DM57_3053 PF01975 Survival protein SurE DM57_3054 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DM57_3055 PF01476 LysM domain DM57_3055 PF01551 Peptidase family M23 DM57_3056 PF00140 Sigma-70 factor, region 1 DM57_3056 PF04539 Sigma-70 region 3 DM57_3056 PF04542 Sigma-70 region 2 DM57_3056 PF04545 Sigma-70, region 4 DM57_3057 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DM57_3058 PF03372 Endonuclease/Exonuclease/phosphatase family DM57_3059 PF05958 tRNA (Uracil-5-)-methyltransferase DM57_306 PF13276 DM57_306 DM57_306 PF13683 DM57_306 DM57_3060 PF01027 Inhibitor of apoptosis-promoting Bax1 DM57_3061 PF00334 Nucleoside diphosphate kinase DM57_3062 PF04055 Radical SAM superfamily DM57_3063 PF13413 Helix-turn-helix domain DM57_3063 PF13464 DM57_3063 DM57_3064 PF04551 GcpE protein DM57_3065 PF03129 Anticodon binding domain DM57_3065 PF13393 Histidyl-tRNA synthetase DM57_3066 PF09976 Tetratricopeptide repeat DM57_3067 PF13360 PQQ-like domain DM57_3068 PF01926 50S ribosome-binding GTPase DM57_3068 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DM57_3069 PF17209 DM57_3069 DM57_3070 PF01926 50S ribosome-binding GTPase DM57_3070 PF13167 DM57_3070 DM57_3070 PF16360 DM57_3070 DM57_3071 PF01145 SPFH domain / Band 7 family DM57_3071 PF12221 DM57_3071 DM57_3072 PF01145 SPFH domain / Band 7 family DM57_3073 PF09838 DM57_3073 DM57_3074 PF13393 Histidyl-tRNA synthetase DM57_3075 PF00709 Adenylosuccinate synthetase DM57_3076 PF00156 Phosphoribosyl transferase domain DM57_3077 PF02705 DM57_3077 DM57_3078 PF00575 S1 RNA binding domain DM57_3078 PF09371 Tex-like protein N-terminal domain DM57_3078 PF12836 Helix-hairpin-helix motif DM57_3078 PF16921 DM57_3078 DM57_3080 PF04325 Protein of unknown function (DUF465) DM57_3081 PF13307 Helicase C-terminal domain DM57_3082 PF13525 Outer membrane lipoprotein DM57_3083 PF00849 RNA pseudouridylate synthase DM57_3083 PF01479 S4 domain DM57_3084 PF02578 Multi-copper polyphenol oxidoreductase laccase DM57_3085 PF07167 DM57_3085 DM57_3086 PF00108 Thiolase, N-terminal domain DM57_3086 PF02803 Thiolase, C-terminal domain DM57_3087 PF00106 short chain dehydrogenase DM57_3088 PF05233 DM57_3088 DM57_3088 PF07879 DM57_3088 DM57_3089 PF00919 Uncharacterized protein family UPF0004 DM57_3089 PF01938 TRAM domain DM57_3089 PF04055 Radical SAM superfamily DM57_309 PF00494 Squalene/phytoene synthase DM57_3090 PF00294 pfkB family carbohydrate kinase DM57_3091 PF00108 Thiolase, N-terminal domain DM57_3091 PF02803 Thiolase, C-terminal domain DM57_3093 PF01053 Cys/Met metabolism PLP-dependent enzyme DM57_3094 PF12710 haloacid dehalogenase-like hydrolase DM57_3094 PF13284 DM57_3094 DM57_3096 PF03649 DM57_3096 DM57_3097 PF00005 ABC transporter DM57_3098 PF05170 DM57_3098 DM57_3099 PF00005 ABC transporter DM57_3099 PF12848 ABC transporter DM57_31 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM57_31 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM57_310 PF07394 DM57_310 DM57_3101 PF00171 Aldehyde dehydrogenase family DM57_3102 PF03060 Nitronate monooxygenase DM57_3103 PF03922 OmpW family DM57_3104 PF06945 DM57_3104 DM57_3105 PF01566 DM57_3105 DM57_3106 PF13416 Bacterial extracellular solute-binding protein DM57_3107 PF00005 ABC transporter DM57_3107 PF08402 TOBE domain DM57_3108 PF00528 Binding-protein-dependent transport system inner membrane component DM57_3109 PF00528 Binding-protein-dependent transport system inner membrane component DM57_311 PF08811 DM57_311 DM57_3111 PF13276 DM57_3111 DM57_3111 PF13683 DM57_3111 DM57_3112 PF01527 Transposase DM57_3113 PF01478 Type IV leader peptidase family DM57_3114 PF07811 DM57_3114 DM57_3115 PF08666 SAF domain DM57_3115 PF16976 DM57_3115 DM57_3116 PF00263 DM57_3116 DM57_3116 PF13629 DM57_3116 DM57_3117 PF16968 DM57_3117 DM57_3119 PF00482 Type II secretion system (T2SS), protein F DM57_3120 PF00482 Type II secretion system (T2SS), protein F DM57_3122 PF12266 DM57_3122 DM57_3123 PF09977 DM57_3123 DM57_3124 PF00158 Sigma-54 interaction domain DM57_3124 PF02954 Bacterial regulatory protein, Fis family DM57_3125 PF11180 DM57_3125 DM57_3126 PF17209 DM57_3126 DM57_3127 PF12778 DM57_3127 DM57_3128 PF07608 DM57_3128 DM57_3129 PF00501 AMP-binding enzyme DM57_3129 PF13193 AMP-binding enzyme C-terminal domain DM57_313 PF00072 Response regulator receiver domain DM57_313 PF00486 Transcriptional regulatory protein, C terminal DM57_3130 PF00440 Bacterial regulatory proteins, tetR family DM57_3131 PF00083 Sugar (and other) transporter DM57_3131 PF07690 Major Facilitator Superfamily DM57_3132 PF13302 Acetyltransferase (GNAT) domain DM57_3133 PF08857 Putative ParB-like nuclease DM57_3134 PF00916 DM57_3134 DM57_3134 PF01740 STAS domain DM57_3135 PF02225 PA domain DM57_3136 PF04185 Phosphoesterase family DM57_3137 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_3139 PF05598 DM57_3139 DM57_3139 PF13751 DM57_3139 DM57_314 PF00512 His Kinase A (phospho-acceptor) domain DM57_314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_314 PF16524 DM57_314 DM57_3141 PF00575 S1 RNA binding domain DM57_3141 PF00773 RNB domain DM57_3141 PF08206 Ribonuclease B OB domain DM57_3142 PF00588 SpoU rRNA Methylase family DM57_3142 PF08032 RNA 2'-O ribose methyltransferase substrate binding DM57_3143 PF01471 Putative peptidoglycan binding domain DM57_3143 PF01510 N-acetylmuramoyl-L-alanine amidase DM57_3144 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DM57_3145 PF00392 Bacterial regulatory proteins, gntR family DM57_3145 PF07729 FCD domain DM57_3146 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM57_3147 PF13276 DM57_3147 DM57_3147 PF13683 DM57_3147 DM57_3148 PF01527 Transposase DM57_3149 PF00528 Binding-protein-dependent transport system inner membrane component DM57_315 PF00578 AhpC/TSA family DM57_3150 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_3151 PF01180 Dihydroorotate dehydrogenase DM57_3152 PF04376 DM57_3152 DM57_3152 PF04377 DM57_3152 DM57_3154 PF00293 NUDIX domain DM57_3154 PF14803 Nudix N-terminal DM57_3156 PF03928 Domain of unknown function (DUF336) DM57_3157 PF00893 Small Multidrug Resistance protein DM57_3158 PF16113 DM57_3158 DM57_316 PF02627 Carboxymuconolactone decarboxylase family DM57_3161 PF00296 Luciferase-like monooxygenase DM57_3162 PF00528 Binding-protein-dependent transport system inner membrane component DM57_3163 PF00005 ABC transporter DM57_3164 PF03459 TOBE domain DM57_3169 PF01527 Transposase DM57_317 PF02542 YgbB family DM57_3172 PF01207 Dihydrouridine synthase (Dus) DM57_3173 PF00375 Sodium:dicarboxylate symporter family DM57_3174 PF01638 HxlR-like helix-turn-helix DM57_3175 PF03061 Thioesterase superfamily DM57_3176 PF00248 Aldo/keto reductase family DM57_3177 PF03773 DM57_3177 DM57_3179 PF01061 DM57_3179 DM57_318 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DM57_3181 PF01527 Transposase DM57_3182 PF13276 DM57_3182 DM57_3182 PF13683 DM57_3182 DM57_3183 PF00582 Universal stress protein family DM57_3184 PF11159 DM57_3184 DM57_3186 PF00717 Peptidase S24-like DM57_3186 PF01726 LexA DNA binding domain DM57_3187 PF13531 Bacterial extracellular solute-binding protein DM57_3188 PF00528 Binding-protein-dependent transport system inner membrane component DM57_3189 PF00528 Binding-protein-dependent transport system inner membrane component DM57_319 PF00270 DEAD/DEAH box helicase DM57_319 PF00271 Helicase conserved C-terminal domain DM57_319 PF02559 CarD-like/TRCF domain DM57_319 PF03461 TRCF domain DM57_3190 PF00005 ABC transporter DM57_3190 PF12857 DM57_3190 DM57_3191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_3191 PF03466 LysR substrate binding domain DM57_3193 PF01527 Transposase DM57_3194 PF13276 DM57_3194 DM57_3194 PF13683 DM57_3194 DM57_3195 PF06798 DM57_3195 DM57_3195 PF08298 PrkA AAA domain DM57_3196 PF04285 DM57_3196 DM57_3197 PF04293 DM57_3197 DM57_3198 PF07690 Major Facilitator Superfamily DM57_3199 PF13379 NMT1-like family DM57_32 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_3201 PF00005 ABC transporter DM57_3202 PF00528 Binding-protein-dependent transport system inner membrane component DM57_3203 PF04964 DM57_3203 DM57_3205 PF16976 DM57_3205 DM57_3206 PF00263 DM57_3206 DM57_3206 PF13629 DM57_3206 DM57_3208 PF09476 DM57_3208 DM57_321 PF01546 Peptidase family M20/M25/M40 DM57_321 PF07687 Peptidase dimerisation domain DM57_322 PF00291 Pyridoxal-phosphate dependent enzyme DM57_323 PF12098 DM57_323 DM57_324 PF00905 Penicillin binding protein transpeptidase domain DM57_324 PF00912 Transglycosylase DM57_324 PF17092 DM57_324 DM57_325 PF04012 DM57_325 DM57_326 PF13432 Tetratricopeptide repeat DM57_330 PF01741 Large-conductance mechanosensitive channel, MscL DM57_334 PF04115 Ureidoglycolate hydrolase DM57_336 PF03561 Allantoicase repeat DM57_3365 PF01636 Phosphotransferase enzyme family DM57_3365 PF13671 AAA domain DM57_3369 PF06850 DM57_3369 DM57_337 PF09349 OHCU decarboxylase DM57_338 PF01522 Polysaccharide deacetylase DM57_339 PF01177 Asp/Glu/Hydantoin racemase DM57_34 PF04542 Sigma-70 region 2 DM57_34 PF08281 Sigma-70, region 4 DM57_340 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DM57_341 PF00392 Bacterial regulatory proteins, gntR family DM57_341 PF07729 FCD domain DM57_342 PF01610 DM57_342 DM57_342 PF13542 DM57_342 DM57_342 PF14690 DM57_342 DM57_343 PF02016 LD-carboxypeptidase DM57_344 PF14437 DM57_344 DM57_345 PF09350 DM57_345 DM57_346 PF09351 Domain of unknown function (DUF1993) DM57_3475 PF00691 OmpA family DM57_3475 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) DM57_35 PF03621 MbtH-like protein DM57_350 PF00117 Glutamine amidotransferase class-I DM57_350 PF00958 GMP synthase C terminal domain DM57_350 PF02540 NAD synthase DM57_352 PF00478 IMP dehydrogenase / GMP reductase domain DM57_352 PF00571 CBS domain DM57_353 PF05988 DM57_353 DM57_355 PF13360 PQQ-like domain DM57_356 PF00892 EamA-like transporter family DM57_357 PF03658 RnfH family Ubiquitin DM57_358 PF03364 Polyketide cyclase / dehydrase and lipid transport DM57_359 PF01668 SmpB protein DM57_3596 PF03067 Chitin binding domain DM57_36 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_360 PF01145 SPFH domain / Band 7 family DM57_360 PF16200 DM57_360 DM57_361 PF01957 NfeD-like C-terminal, partner-binding DM57_362 PF00391 PEP-utilising enzyme, mobile domain DM57_362 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DM57_362 PF02896 PEP-utilising enzyme, TIM barrel domain DM57_363 PF05023 Phytochelatin synthase DM57_365 PF00082 Subtilase family DM57_365 PF09286 Pro-kumamolisin, activation domain DM57_366 PF03618 DM57_366 DM57_367 PF00588 SpoU rRNA Methylase family DM57_368 PF01351 Ribonuclease HII DM57_369 PF02684 DM57_369 DM57_37 PF00005 ABC transporter DM57_370 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_370 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DM57_371 PF07977 FabA-like domain DM57_372 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_372 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DM57_373 PF03938 Outer membrane protein (OmpH-like) DM57_374 PF01103 Surface antigen DM57_374 PF07244 Surface antigen variable number repeat DM57_3746 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_375 PF02163 Peptidase family M50 DM57_375 PF13180 PDZ domain DM57_376 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DM57_376 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal DM57_376 PF13288 DXP reductoisomerase C-terminal domain DM57_377 PF01148 Cytidylyltransferase family DM57_378 PF01255 Putative undecaprenyl diphosphate synthase DM57_379 PF01765 Ribosome recycling factor DM57_38 PF01032 FecCD transport family DM57_380 PF00696 Amino acid kinase family DM57_381 PF00889 Elongation factor TS DM57_382 PF00318 Ribosomal protein S2 DM57_383 PF00557 Metallopeptidase family M24 DM57_384 PF01909 Nucleotidyltransferase domain DM57_384 PF01966 HD domain DM57_384 PF08335 GlnD PII-uridylyltransferase DM57_385 PF00849 RNA pseudouridylate synthase DM57_385 PF01479 S4 domain DM57_386 PF01327 Polypeptide deformylase DM57_387 PF00533 BRCA1 C Terminus (BRCT) domain DM57_387 PF01653 NAD-dependent DNA ligase adenylation domain DM57_387 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DM57_387 PF03120 NAD-dependent DNA ligase OB-fold domain DM57_387 PF12826 Helix-hairpin-helix motif DM57_387 PF14520 Helix-hairpin-helix domain DM57_388 PF04354 ZipA, C-terminal FtsZ-binding domain DM57_389 PF02463 RecF/RecN/SMC N terminal domain DM57_389 PF06470 SMC proteins Flexible Hinge Domain DM57_39 PF06276 Ferric iron reductase FhuF-like transporter DM57_39 PF11575 DM57_39 DM57_390 PF00892 EamA-like transporter family DM57_391 PF00155 Aminotransferase class I and II DM57_392 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_392 PF14602 Hexapeptide repeat of succinyl-transferase DM57_392 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DM57_393 PF03960 ArsC family DM57_394 PF01546 Peptidase family M20/M25/M40 DM57_394 PF07687 Peptidase dimerisation domain DM57_395 PF05175 Methyltransferase small domain DM57_396 PF13091 PLD-like domain DM57_396 PF13396 DM57_396 DM57_397 PF00255 Glutathione peroxidase DM57_398 PF00005 ABC transporter DM57_398 PF12848 ABC transporter DM57_398 PF16326 DM57_398 DM57_3993 PF07690 Major Facilitator Superfamily DM57_4 PF13432 Tetratricopeptide repeat DM57_4 PF14559 Tetratricopeptide repeat DM57_40 PF01497 Periplasmic binding protein DM57_400 PF05362 Lon protease (S16) C-terminal proteolytic domain DM57_400 PF13481 AAA domain DM57_4009 PF07690 Major Facilitator Superfamily DM57_401 PF00842 Alanine racemase, C-terminal domain DM57_401 PF01168 Alanine racemase, N-terminal domain DM57_402 PF07690 Major Facilitator Superfamily DM57_403 PF08543 Phosphomethylpyrimidine kinase DM57_4037 PF00005 ABC transporter DM57_4037 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM57_404 PF08907 DM57_404 DM57_4042 PF03576 Peptidase family S58 DM57_406 PF00583 Acetyltransferase (GNAT) family DM57_407 PF00814 Glycoprotease family DM57_408 PF00887 Acyl CoA binding protein DM57_409 PF00270 DEAD/DEAH box helicase DM57_409 PF00271 Helicase conserved C-terminal domain DM57_41 PF09351 Domain of unknown function (DUF1993) DM57_412 PF00463 Isocitrate lyase family DM57_413 PF00582 Universal stress protein family DM57_4134 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_4134 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_4134 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DM57_414 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_414 PF03466 LysR substrate binding domain DM57_4146 PF12833 Helix-turn-helix domain DM57_415 PF00702 haloacid dehalogenase-like hydrolase DM57_416 PF01274 Malate synthase DM57_417 PF06094 AIG2-like family DM57_418 PF03737 Demethylmenaquinone methyltransferase DM57_419 PF02311 AraC-like ligand binding domain DM57_419 PF12833 Helix-turn-helix domain DM57_42 PF00005 ABC transporter DM57_420 PF00583 Acetyltransferase (GNAT) family DM57_424 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM57_425 PF01734 Patatin-like phospholipase DM57_4256 PF13609 Gram-negative porin DM57_426 PF00877 NlpC/P60 family DM57_427 PF00005 ABC transporter DM57_427 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM57_428 PF00528 Binding-protein-dependent transport system inner membrane component DM57_429 PF00528 Binding-protein-dependent transport system inner membrane component DM57_43 PF00501 AMP-binding enzyme DM57_43 PF00550 Phosphopantetheine attachment site DM57_43 PF00668 Condensation domain DM57_43 PF13193 AMP-binding enzyme C-terminal domain DM57_430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM57_431 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_432 PF12778 DM57_432 DM57_433 PF00384 Molybdopterin oxidoreductase DM57_433 PF01568 Molydopterin dinucleotide binding domain DM57_433 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM57_434 PF00970 Oxidoreductase FAD-binding domain DM57_435 PF00037 4Fe-4S binding domain DM57_435 PF11953 Domain of unknown function (DUF3470) DM57_437 PF00440 Bacterial regulatory proteins, tetR family DM57_438 PF00557 Metallopeptidase family M24 DM57_439 PF11903 DM57_439 DM57_44 PF00501 AMP-binding enzyme DM57_44 PF00550 Phosphopantetheine attachment site DM57_44 PF00668 Condensation domain DM57_44 PF13193 AMP-binding enzyme C-terminal domain DM57_440 PF00206 Lyase DM57_440 PF13535 ATP-grasp domain DM57_441 PF00291 Pyridoxal-phosphate dependent enzyme DM57_442 PF00288 GHMP kinases N terminal domain DM57_4424 PF01494 FAD binding domain DM57_443 PF01507 Phosphoadenosine phosphosulfate reductase family DM57_444 PF10111 Glycosyltransferase like family 2 DM57_445 PF00266 Aminotransferase class-V DM57_446 PF01757 DM57_446 DM57_448 PF02779 Transketolase, pyrimidine binding domain DM57_448 PF17147 DM57_448 DM57_449 PF00456 Transketolase, thiamine diphosphate binding domain DM57_45 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DM57_450 PF13469 Sulfotransferase family DM57_451 PF14305 DM57_451 DM57_452 PF13649 Methyltransferase domain DM57_453 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM57_454 PF03567 Sulfotransferase family DM57_455 PF00501 AMP-binding enzyme DM57_455 PF00550 Phosphopantetheine attachment site DM57_455 PF00668 Condensation domain DM57_455 PF13193 AMP-binding enzyme C-terminal domain DM57_456 PF00501 AMP-binding enzyme DM57_456 PF00550 Phosphopantetheine attachment site DM57_456 PF00668 Condensation domain DM57_456 PF13193 AMP-binding enzyme C-terminal domain DM57_457 PF13454 FAD-NAD(P)-binding DM57_4572 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DM57_458 PF05977 Transmembrane secretion effector DM57_459 PF00501 AMP-binding enzyme DM57_459 PF00550 Phosphopantetheine attachment site DM57_459 PF13193 AMP-binding enzyme C-terminal domain DM57_46 PF00593 TonB dependent receptor DM57_46 PF07715 TonB-dependent Receptor Plug Domain DM57_460 PF01583 Adenylylsulphate kinase DM57_461 PF13437 HlyD family secretion protein DM57_461 PF13533 Biotin-lipoyl like DM57_462 PF00873 AcrB/AcrD/AcrF family DM57_465 PF03797 Autotransporter beta-domain DM57_465 PF13472 GDSL-like Lipase/Acylhydrolase family DM57_468 PF00696 Amino acid kinase family DM57_468 PF01842 ACT domain DM57_468 PF13840 ACT domain DM57_469 PF01171 PP-loop family DM57_469 PF09179 TilS substrate binding domain DM57_469 PF11734 TilS substrate C-terminal domain DM57_47 PF00551 Formyl transferase DM57_470 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DM57_4702 PF07859 alpha/beta hydrolase fold DM57_471 PF00730 HhH-GPD superfamily base excision DNA repair protein DM57_472 PF01406 tRNA synthetases class I (C) catalytic domain DM57_472 PF09190 DALR domain DM57_473 PF13432 Tetratricopeptide repeat DM57_474 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DM57_475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DM57_476 PF00149 Calcineurin-like phosphoesterase DM57_477 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_478 PF00588 SpoU rRNA Methylase family DM57_479 PF00459 Inositol monophosphatase family DM57_48 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM57_48 PF07685 CobB/CobQ-like glutamine amidotransferase domain DM57_481 PF00488 MutS domain V DM57_481 PF01624 MutS domain I DM57_481 PF05188 MutS domain II DM57_481 PF05190 MutS family domain IV DM57_481 PF05192 MutS domain III DM57_4840 PF00356 Bacterial regulatory proteins, lacI family DM57_4840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DM57_485 PF08007 Cupin superfamily protein DM57_486 PF12706 Beta-lactamase superfamily domain DM57_487 PF06804 NlpB/DapX lipoprotein DM57_488 PF00701 Dihydrodipicolinate synthetase family DM57_49 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DM57_490 PF00579 tRNA synthetases class I (W and Y) DM57_492 PF01300 Telomere recombination DM57_4923 PF01494 FAD binding domain DM57_493 PF02811 PHP domain DM57_494 PF12697 Alpha/beta hydrolase family DM57_495 PF04305 DM57_495 DM57_496 PF00132 Bacterial transferase hexapeptide (six repeats) DM57_497 PF01430 Hsp33 protein DM57_499 PF04977 Septum formation initiator DM57_5 PF07811 DM57_5 DM57_50 PF01890 Cobalamin synthesis G C-terminus DM57_500 PF00113 Enolase, C-terminal TIM barrel domain DM57_500 PF03952 Enolase, N-terminal domain DM57_501 PF00793 DAHP synthetase I family DM57_502 PF00117 Glutamine amidotransferase class-I DM57_502 PF06418 CTP synthase N-terminus DM57_503 PF12697 Alpha/beta hydrolase family DM57_504 PF00753 Metallo-beta-lactamase superfamily DM57_504 PF03772 DM57_504 DM57_504 PF13567 DM57_504 DM57_505 PF01026 TatD related DNase DM57_506 PF00005 ABC transporter DM57_507 PF02687 DM57_507 DM57_507 PF12704 MacB-like periplasmic core domain DM57_5079 PF13460 NADH(P)-binding DM57_509 PF01368 DHH family DM57_509 PF02272 DHHA1 domain DM57_51 PF03824 DM57_51 DM57_510 PF00472 RF-1 domain DM57_510 PF03462 PCRF domain DM57_511 PF00152 tRNA synthetases class II (D, K and N) DM57_511 PF01336 OB-fold nucleic acid binding domain DM57_512 PF05433 DM57_512 DM57_513 PF04384 Iron-sulphur cluster assembly DM57_514 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_515 PF00012 Hsp70 protein DM57_516 PF07743 HSCB C-terminal oligomerisation domain DM57_517 PF01521 Iron-sulphur cluster biosynthesis DM57_518 PF01592 NifU-like N terminal domain DM57_519 PF00266 Aminotransferase class-V DM57_52 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM57_52 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM57_520 PF02082 Transcriptional regulator DM57_521 PF01451 Low molecular weight phosphotyrosine protein phosphatase DM57_523 PF02589 Uncharacterised ACR, YkgG family COG1556 DM57_523 PF11870 DM57_523 DM57_523 PF13183 4Fe-4S dicluster domain DM57_524 PF02754 DM57_524 DM57_525 PF01614 Bacterial transcriptional regulator DM57_525 PF09339 IclR helix-turn-helix domain DM57_529 PF09361 DM57_529 DM57_53 PF02514 DM57_53 DM57_530 PF00768 D-alanyl-D-alanine carboxypeptidase DM57_533 PF00364 Biotin-requiring enzyme DM57_533 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM57_533 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_534 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM57_534 PF00364 Biotin-requiring enzyme DM57_534 PF02817 e3 binding domain DM57_535 PF00456 Transketolase, thiamine diphosphate binding domain DM57_536 PF00512 His Kinase A (phospho-acceptor) domain DM57_536 PF00989 PAS fold DM57_536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_536 PF13188 PAS domain DM57_537 PF00072 Response regulator receiver domain DM57_537 PF00196 Bacterial regulatory proteins, luxR family DM57_538 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DM57_538 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DM57_539 PF01432 Peptidase family M3 DM57_54 PF07728 AAA domain (dynein-related subfamily) DM57_542 PF07690 Major Facilitator Superfamily DM57_543 PF07690 Major Facilitator Superfamily DM57_544 PF00384 Molybdopterin oxidoreductase DM57_544 PF01568 Molydopterin dinucleotide binding domain DM57_544 PF14710 Respiratory nitrate reductase alpha N-terminal DM57_545 PF13247 4Fe-4S dicluster domain DM57_545 PF14711 Respiratory nitrate reductase beta C-terminal DM57_546 PF02613 Nitrate reductase delta subunit DM57_547 PF02665 Nitrate reductase gamma subunit DM57_548 PF00672 HAMP domain DM57_548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_548 PF07730 Histidine kinase DM57_548 PF13185 GAF domain DM57_548 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DM57_549 PF00072 Response regulator receiver domain DM57_549 PF00196 Bacterial regulatory proteins, luxR family DM57_55 PF13519 von Willebrand factor type A domain DM57_550 PF03372 Endonuclease/Exonuclease/phosphatase family DM57_551 PF05598 DM57_551 DM57_551 PF13751 DM57_551 DM57_552 PF00072 Response regulator receiver domain DM57_552 PF00158 Sigma-54 interaction domain DM57_552 PF02954 Bacterial regulatory protein, Fis family DM57_553 PF00512 His Kinase A (phospho-acceptor) domain DM57_553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_554 PF00120 Glutamine synthetase, catalytic domain DM57_554 PF03951 Glutamine synthetase, beta-Grasp domain DM57_555 PF00581 Rhodanese-like domain DM57_556 PF00994 Probable molybdopterin binding domain DM57_557 PF07264 Etoposide-induced protein 2 DM57_558 PF04116 DM57_558 DM57_559 PF10282 Lactonase, 7-bladed beta-propeller DM57_56 PF02230 Phospholipase/Carboxylesterase DM57_562 PF00583 Acetyltransferase (GNAT) family DM57_562 PF00696 Amino acid kinase family DM57_563 PF04362 Bacterial Fe(2+) trafficking DM57_564 PF00083 Sugar (and other) transporter DM57_565 PF02515 CoA-transferase family III DM57_566 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_566 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_567 PF03466 LysR substrate binding domain DM57_569 PF05598 DM57_569 DM57_569 PF13751 DM57_569 DM57_570 PF13276 DM57_570 DM57_570 PF13683 DM57_570 DM57_571 PF01527 Transposase DM57_572 PF05433 DM57_572 DM57_574 PF00892 EamA-like transporter family DM57_577 PF00472 RF-1 domain DM57_578 PF13538 UvrD-like helicase C-terminal domain DM57_578 PF13604 AAA domain DM57_579 PF00580 UvrD/REP helicase N-terminal domain DM57_579 PF12705 PD-(D/E)XK nuclease superfamily DM57_579 PF13361 UvrD-like helicase C-terminal domain DM57_58 PF00704 Glycosyl hydrolases family 18 DM57_580 PF04257 Exodeoxyribonuclease V, gamma subunit DM57_581 PF12805 DM57_581 DM57_581 PF13515 DM57_581 DM57_582 PF00324 Amino acid permease DM57_584 PF13343 Bacterial extracellular solute-binding protein DM57_585 PF00528 Binding-protein-dependent transport system inner membrane component DM57_586 PF00005 ABC transporter DM57_587 PF01037 AsnC family DM57_587 PF13404 AsnC-type helix-turn-helix domain DM57_59 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_59 PF11760 Cobalamin synthesis G N-terminal DM57_590 PF02082 Transcriptional regulator DM57_592 PF05787 Bacterial protein of unknown function (DUF839) DM57_593 PF09339 IclR helix-turn-helix domain DM57_597 PF11062 DM57_597 DM57_598 PF00196 Bacterial regulatory proteins, luxR family DM57_598 PF06490 DM57_598 DM57_599 PF01891 Cobalt uptake substrate-specific transmembrane region DM57_6 PF07811 DM57_6 DM57_6 PF09977 DM57_6 DM57_60 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_601 PF00246 Zinc carboxypeptidase DM57_602 PF03883 DM57_602 DM57_603 PF13470 DM57_603 DM57_604 PF00155 Aminotransferase class I and II DM57_605 PF13417 Glutathione S-transferase, N-terminal domain DM57_606 PF00378 Enoyl-CoA hydratase/isomerase family DM57_607 PF00300 Histidine phosphatase superfamily (branch 1) DM57_608 PF01636 Phosphotransferase enzyme family DM57_609 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_609 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_609 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_61 PF02570 Precorrin-8X methylmutase DM57_611 PF13229 Right handed beta helix region DM57_612 PF01575 MaoC like domain DM57_613 PF01575 MaoC like domain DM57_614 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_614 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_615 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_616 PF06676 DM57_616 DM57_617 PF00293 NUDIX domain DM57_618 PF10993 DM57_618 DM57_619 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DM57_62 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DM57_62 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DM57_620 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DM57_620 PF01059 DM57_620 DM57_621 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains DM57_621 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DM57_622 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DM57_623 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DM57_624 PF12838 4Fe-4S dicluster domain DM57_625 PF00146 NADH dehydrogenase DM57_626 PF00384 Molybdopterin oxidoreductase DM57_626 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM57_626 PF13510 2Fe-2S iron-sulfur cluster binding domain DM57_627 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DM57_627 PF10531 SLBB domain DM57_627 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM57_628 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin DM57_629 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DM57_63 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_630 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DM57_631 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DM57_632 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DM57_634 PF03840 Preprotein translocase SecG subunit DM57_635 PF00121 Triosephosphate isomerase DM57_636 PF00107 Zinc-binding dehydrogenase DM57_637 PF00013 KH domain DM57_637 PF00575 S1 RNA binding domain DM57_637 PF01138 3' exoribonuclease family, domain 1 DM57_637 PF03725 3' exoribonuclease family, domain 2 DM57_637 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DM57_638 PF00312 Ribosomal protein S15 DM57_639 PF13458 Periplasmic binding protein DM57_64 PF01888 CbiD DM57_641 PF00484 Carbonic anhydrase DM57_642 PF00916 DM57_642 DM57_643 PF13276 DM57_643 DM57_643 PF13683 DM57_643 DM57_644 PF01527 Transposase DM57_646 PF01066 CDP-alcohol phosphatidyltransferase DM57_647 PF02666 DM57_647 DM57_648 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DM57_648 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain DM57_649 PF10369 Small subunit of acetolactate synthase DM57_649 PF13710 ACT domain DM57_65 PF02571 DM57_65 DM57_650 PF00205 Thiamine pyrophosphate enzyme, central domain DM57_650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM57_650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM57_651 PF08281 Sigma-70, region 4 DM57_652 PF12279 DM57_652 DM57_653 PF11304 DM57_653 DM57_654 PF06271 DM57_654 DM57_658 PF00534 Glycosyl transferases group 1 DM57_658 PF13439 Glycosyltransferase Family 4 DM57_659 PF01219 Prokaryotic diacylglycerol kinase DM57_66 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM57_660 PF00440 Bacterial regulatory proteins, tetR family DM57_660 PF13972 Bacterial transcriptional repressor DM57_661 PF03641 Possible lysine decarboxylase DM57_662 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_664 PF07690 Major Facilitator Superfamily DM57_665 PF01610 DM57_665 DM57_665 PF13542 DM57_665 DM57_665 PF14690 DM57_665 DM57_666 PF01425 Amidase DM57_667 PF06041 Bacterial protein of unknown function (DUF924) DM57_668 PF01411 tRNA synthetases class II (A) DM57_668 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM57_669 PF01152 Bacterial-like globin DM57_67 PF02638 DM57_67 DM57_672 PF13548 DM57_672 DM57_673 PF00893 Small Multidrug Resistance protein DM57_674 PF03891 DM57_674 DM57_675 PF00072 Response regulator receiver domain DM57_675 PF00486 Transcriptional regulatory protein, C terminal DM57_676 PF00512 His Kinase A (phospho-acceptor) domain DM57_676 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_676 PF02702 Osmosensitive K+ channel His kinase sensor domain DM57_676 PF13492 GAF domain DM57_676 PF13493 Domain of unknown function (DUF4118) DM57_678 PF02669 DM57_678 DM57_679 PF00122 E1-E2 ATPase DM57_679 PF00702 haloacid dehalogenase-like hydrolase DM57_68 PF07690 Major Facilitator Superfamily DM57_680 PF03814 DM57_680 DM57_681 PF09604 DM57_681 DM57_682 PF00107 Zinc-binding dehydrogenase DM57_682 PF08240 Alcohol dehydrogenase GroES-like domain DM57_683 PF02142 MGS-like domain DM57_685 PF13561 Enoyl-(Acyl carrier protein) reductase DM57_686 PF14681 Uracil phosphoribosyltransferase DM57_687 PF01709 Transcriptional regulator DM57_688 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DM57_688 PF02843 Phosphoribosylglycinamide synthetase, C domain DM57_688 PF02844 Phosphoribosylglycinamide synthetase, N domain DM57_689 PF01218 Coproporphyrinogen III oxidase DM57_69 PF12802 MarR family DM57_691 PF02410 Oligomerisation domain DM57_692 PF02590 Predicted SPOUT methyltransferase DM57_693 PF02545 Maf-like protein DM57_694 PF10150 Ribonuclease E/G family DM57_695 PF00860 Permease family DM57_696 PF03283 DM57_696 DM57_7 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_70 PF13458 Periplasmic binding protein DM57_701 PF04542 Sigma-70 region 2 DM57_701 PF08281 Sigma-70, region 4 DM57_702 PF02627 Carboxymuconolactone decarboxylase family DM57_704 PF07690 Major Facilitator Superfamily DM57_705 PF13515 DM57_705 DM57_706 PF11776 Domain of unknown function (DUF3315) DM57_707 PF00535 Glycosyl transferase family 2 DM57_708 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_709 PF00534 Glycosyl transferases group 1 DM57_71 PF12802 MarR family DM57_710 PF04932 DM57_710 DM57_711 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_712 PF00534 Glycosyl transferases group 1 DM57_712 PF13439 Glycosyltransferase Family 4 DM57_713 PF00005 ABC transporter DM57_713 PF00664 ABC transporter transmembrane region DM57_714 PF01336 OB-fold nucleic acid binding domain DM57_714 PF02811 PHP domain DM57_714 PF07733 Bacterial DNA polymerase III alpha subunit DM57_714 PF14579 Helix-hairpin-helix motif DM57_716 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM57_717 PF00270 DEAD/DEAH box helicase DM57_717 PF00271 Helicase conserved C-terminal domain DM57_718 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DM57_72 PF00043 Glutathione S-transferase, C-terminal domain DM57_72 PF02798 Glutathione S-transferase, N-terminal domain DM57_720 PF01370 NAD dependent epimerase/dehydratase family DM57_720 PF02222 ATP-grasp domain DM57_721 PF03724 META domain DM57_722 PF01580 FtsK/SpoIIIE family DM57_722 PF09397 Ftsk gamma domain DM57_724 PF10282 Lactonase, 7-bladed beta-propeller DM57_725 PF00723 Glycosyl hydrolases family 15 DM57_726 PF06850 DM57_726 DM57_727 PF00440 Bacterial regulatory proteins, tetR family DM57_727 PF14514 Transcriptional regulator, TetR, C-terminal DM57_728 PF04060 Putative Fe-S cluster DM57_728 PF14697 4Fe-4S dicluster domain DM57_729 PF00633 Helix-hairpin-helix motif DM57_729 PF00730 HhH-GPD superfamily base excision DNA repair protein DM57_73 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_73 PF03466 LysR substrate binding domain DM57_730 PF00892 EamA-like transporter family DM57_732 PF01610 DM57_732 DM57_732 PF13542 DM57_732 DM57_732 PF14690 DM57_732 DM57_733 PF00034 Cytochrome c DM57_734 PF00034 Cytochrome c DM57_735 PF00004 ATPase family associated with various cellular activities (AAA) DM57_736 PF05762 VWA domain containing CoxE-like protein DM57_737 PF03594 DM57_737 DM57_738 PF00923 Transaldolase DM57_739 PF06983 3-demethylubiquinone-9 3-methyltransferase DM57_74 PF03928 Domain of unknown function (DUF336) DM57_741 PF11755 DM57_741 DM57_743 PF03167 Uracil DNA glycosylase superfamily DM57_744 PF04345 Chorismate lyase DM57_745 PF00183 Hsp90 protein DM57_745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_746 PF00155 Aminotransferase class I and II DM57_746 PF00392 Bacterial regulatory proteins, gntR family DM57_747 PF13468 Glyoxalase-like domain DM57_748 PF00892 EamA-like transporter family DM57_749 PF00155 Aminotransferase class I and II DM57_75 PF00106 short chain dehydrogenase DM57_750 PF01527 Transposase DM57_752 PF01381 Helix-turn-helix DM57_752 PF07883 Cupin domain DM57_753 PF00596 Class II Aldolase and Adducin N-terminal domain DM57_754 PF00701 Dihydrodipicolinate synthetase family DM57_755 PF03473 MOSC domain DM57_755 PF03475 3-alpha domain DM57_756 PF00561 alpha/beta hydrolase fold DM57_757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_757 PF03466 LysR substrate binding domain DM57_758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_758 PF03466 LysR substrate binding domain DM57_759 PF04234 CopC domain DM57_76 PF00696 Amino acid kinase family DM57_760 PF00849 RNA pseudouridylate synthase DM57_760 PF01479 S4 domain DM57_761 PF02254 TrkA-N domain DM57_763 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_763 PF00175 Oxidoreductase NAD-binding domain DM57_763 PF00970 Oxidoreductase FAD-binding domain DM57_764 PF00202 Aminotransferase class-III DM57_765 PF00583 Acetyltransferase (GNAT) family DM57_766 PF10042 DM57_766 DM57_767 PF00005 ABC transporter DM57_768 PF00005 ABC transporter DM57_768 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM57_769 PF02653 DM57_769 DM57_77 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM57_77 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM57_770 PF02653 DM57_770 DM57_771 PF01527 Transposase DM57_772 PF13276 DM57_772 DM57_772 PF13683 DM57_772 DM57_773 PF02719 Polysaccharide biosynthesis protein DM57_773 PF13727 CoA-binding domain DM57_774 PF00953 Glycosyl transferase family 4 DM57_776 PF13276 DM57_776 DM57_776 PF13683 DM57_776 DM57_777 PF01527 Transposase DM57_778 PF13641 Glycosyltransferase like family 2 DM57_78 PF02274 Amidinotransferase DM57_780 PF00535 Glycosyl transferase family 2 DM57_780 PF13641 Glycosyltransferase like family 2 DM57_781 PF00535 Glycosyl transferase family 2 DM57_781 PF13489 Methyltransferase domain DM57_782 PF00535 Glycosyl transferase family 2 DM57_783 PF01370 NAD dependent epimerase/dehydratase family DM57_784 PF01757 DM57_784 DM57_785 PF00005 ABC transporter DM57_785 PF14524 Wzt C-terminal domain DM57_786 PF01061 DM57_786 DM57_787 PF04321 RmlD substrate binding domain DM57_788 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DM57_789 PF00483 Nucleotidyl transferase DM57_79 PF13520 Amino acid permease DM57_790 PF16363 DM57_790 DM57_791 PF00149 Calcineurin-like phosphoesterase DM57_792 PF01553 Acyltransferase DM57_793 PF01979 Amidohydrolase family DM57_794 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM57_794 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM57_795 PF00156 Phosphoribosyl transferase domain DM57_796 PF03652 Uncharacterised protein family (UPF0081) DM57_797 PF02622 Uncharacterized ACR, COG1678 DM57_799 PF00301 Rubredoxin DM57_8 PF00528 Binding-protein-dependent transport system inner membrane component DM57_800 PF08543 Phosphomethylpyrimidine kinase DM57_801 PF00118 TCP-1/cpn60 chaperonin family DM57_802 PF00166 Chaperonin 10 Kd subunit DM57_804 PF01638 HxlR-like helix-turn-helix DM57_805 PF00107 Zinc-binding dehydrogenase DM57_805 PF08240 Alcohol dehydrogenase GroES-like domain DM57_808 PF03922 OmpW family DM57_809 PF11170 DM57_809 DM57_81 PF00528 Binding-protein-dependent transport system inner membrane component DM57_810 PF11170 DM57_810 DM57_811 PF01638 HxlR-like helix-turn-helix DM57_812 PF00753 Metallo-beta-lactamase superfamily DM57_813 PF01381 Helix-turn-helix DM57_814 PF00583 Acetyltransferase (GNAT) family DM57_815 PF01810 DM57_815 DM57_816 PF03009 Glycerophosphoryl diester phosphodiesterase family DM57_817 PF07690 Major Facilitator Superfamily DM57_818 PF01925 DM57_818 DM57_819 PF00450 Serine carboxypeptidase DM57_820 PF10605 DM57_820 DM57_821 PF04972 BON domain DM57_822 PF16868 DM57_822 DM57_823 PF01323 DSBA-like thioredoxin domain DM57_824 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_824 PF03466 LysR substrate binding domain DM57_825 PF01032 FecCD transport family DM57_826 PF01497 Periplasmic binding protein DM57_828 PF00005 ABC transporter DM57_829 PF00593 TonB dependent receptor DM57_829 PF07715 TonB-dependent Receptor Plug Domain DM57_83 PF00005 ABC transporter DM57_830 PF13474 SnoaL-like domain DM57_831 PF13531 Bacterial extracellular solute-binding protein DM57_832 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM57_832 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM57_833 PF00111 2Fe-2S iron-sulfur cluster binding domain DM57_833 PF00941 FAD binding domain in molybdopterin dehydrogenase DM57_833 PF01799 [2Fe-2S] binding domain DM57_833 PF03450 CO dehydrogenase flavoprotein C-terminal domain DM57_834 PF07690 Major Facilitator Superfamily DM57_835 PF00892 EamA-like transporter family DM57_836 PF12833 Helix-turn-helix domain DM57_837 PF00266 Aminotransferase class-V DM57_838 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_838 PF03466 LysR substrate binding domain DM57_839 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM57_839 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM57_84 PF00528 Binding-protein-dependent transport system inner membrane component DM57_840 PF00881 Nitroreductase family DM57_841 PF07690 Major Facilitator Superfamily DM57_842 PF07690 Major Facilitator Superfamily DM57_843 PF01557 Fumarylacetoacetate (FAA) hydrolase family DM57_843 PF09298 Fumarylacetoacetase N-terminal DM57_844 PF04209 homogentisate 1,2-dioxygenase DM57_845 PF07690 Major Facilitator Superfamily DM57_846 PF10932 DM57_846 DM57_847 PF01494 FAD binding domain DM57_849 PF00563 EAL domain DM57_85 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DM57_850 PF04828 Glutathione-dependent formaldehyde-activating enzyme DM57_851 PF01614 Bacterial transcriptional regulator DM57_851 PF09339 IclR helix-turn-helix domain DM57_852 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM57_852 PF02770 Acyl-CoA dehydrogenase, middle domain DM57_852 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM57_853 PF00578 AhpC/TSA family DM57_853 PF10417 C-terminal domain of 1-Cys peroxiredoxin DM57_854 PF05957 DM57_854 DM57_855 PF07332 DM57_855 DM57_856 PF11780 DM57_856 DM57_857 PF07963 Prokaryotic N-terminal methylation motif DM57_857 PF16732 DM57_857 DM57_859 PF16074 DM57_859 DM57_86 PF13649 Methyltransferase domain DM57_861 PF12019 Type II transport protein GspH DM57_862 PF03477 ATP cone domain DM57_863 PF00464 Serine hydroxymethyltransferase DM57_864 PF00106 short chain dehydrogenase DM57_865 PF03061 Thioesterase superfamily DM57_866 PF01618 DM57_866 DM57_867 PF02472 Biopolymer transport protein ExbD/TolR DM57_868 PF13103 TonB C terminal DM57_869 PF04052 TolB amino-terminal domain DM57_869 PF07676 WD40-like Beta Propeller Repeat DM57_87 PF07690 Major Facilitator Superfamily DM57_870 PF00691 OmpA family DM57_871 PF13525 Outer membrane lipoprotein DM57_871 PF16331 DM57_871 DM57_873 PF01527 Transposase DM57_874 PF13276 DM57_874 DM57_874 PF13683 DM57_874 DM57_876 PF01272 Transcription elongation factor, GreA/GreB, C-term DM57_876 PF03449 Transcription elongation factor, N-terminal DM57_879 PF02824 TGS domain DM57_879 PF04607 Region found in RelA / SpoT proteins DM57_879 PF13291 ACT domain DM57_879 PF13328 HD domain DM57_88 PF00501 AMP-binding enzyme DM57_88 PF13193 AMP-binding enzyme C-terminal domain DM57_880 PF01192 RNA polymerase Rpb6 DM57_881 PF00625 Guanylate kinase DM57_882 PF03755 DM57_882 DM57_882 PF08340 DM57_882 DM57_883 PF01138 3' exoribonuclease family, domain 1 DM57_883 PF03725 3' exoribonuclease family, domain 2 DM57_884 PF01725 Ham1 family DM57_885 PF04055 Radical SAM superfamily DM57_885 PF06969 HemN C-terminal domain DM57_888 PF13103 TonB C terminal DM57_889 PF00083 Sugar (and other) transporter DM57_889 PF07690 Major Facilitator Superfamily DM57_89 PF12085 DM57_89 DM57_891 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_893 PF00654 Voltage gated chloride channel DM57_894 PF12779 DM57_894 DM57_895 PF03776 Septum formation topological specificity factor MinE DM57_896 PF13614 AAA domain DM57_897 PF03775 Septum formation inhibitor MinC, C-terminal domain DM57_897 PF05209 Septum formation inhibitor MinC, N-terminal domain DM57_9 PF00528 Binding-protein-dependent transport system inner membrane component DM57_90 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM57_90 PF12729 DM57_90 DM57_901 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM57_901 PF02403 Seryl-tRNA synthetase N-terminal domain DM57_902 PF09932 DM57_902 DM57_903 PF00004 ATPase family associated with various cellular activities (AAA) DM57_903 PF12002 MgsA AAA+ ATPase C terminal DM57_903 PF16193 DM57_903 DM57_904 PF03548 Outer membrane lipoprotein carrier protein LolA DM57_905 PF01580 FtsK/SpoIIIE family DM57_905 PF09397 Ftsk gamma domain DM57_905 PF13491 DM57_905 DM57_906 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM57_907 PF01713 Smr domain DM57_908 PF03458 DM57_908 DM57_909 PF00005 ABC transporter DM57_909 PF08402 TOBE domain DM57_91 PF01584 CheW-like domain DM57_910 PF00528 Binding-protein-dependent transport system inner membrane component DM57_911 PF00528 Binding-protein-dependent transport system inner membrane component DM57_912 PF01547 Bacterial extracellular solute-binding protein DM57_913 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DM57_913 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DM57_914 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DM57_915 PF01380 SIS domain DM57_915 PF01418 Helix-turn-helix domain, rpiR family DM57_915 PF02685 Glucokinase DM57_916 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM57_917 PF00528 Binding-protein-dependent transport system inner membrane component DM57_918 PF00005 ABC transporter DM57_919 PF00291 Pyridoxal-phosphate dependent enzyme DM57_920 PF11287 DM57_920 DM57_921 PF07690 Major Facilitator Superfamily DM57_924 PF00202 Aminotransferase class-III DM57_925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DM57_925 PF01872 RibD C-terminal domain DM57_926 PF00677 Lumazine binding domain DM57_927 PF00925 GTP cyclohydrolase II DM57_927 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DM57_928 PF00885 6,7-dimethyl-8-ribityllumazine synthase DM57_929 PF01029 NusB family DM57_93 PF02311 AraC-like ligand binding domain DM57_93 PF12833 Helix-turn-helix domain DM57_930 PF00155 Aminotransferase class I and II DM57_931 PF01464 Transglycosylase SLT domain DM57_932 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DM57_933 PF01810 DM57_933 DM57_934 PF00291 Pyridoxal-phosphate dependent enzyme DM57_936 PF03807 NADP oxidoreductase coenzyme F420-dependent DM57_936 PF10727 Rossmann-like domain DM57_936 PF10728 Domain of unknown function (DUF2520) DM57_937 PF02325 DM57_937 DM57_938 PF02641 Uncharacterized ACR, COG1993 DM57_939 PF02537 DM57_939 DM57_94 PF13609 Gram-negative porin DM57_941 PF08241 Methyltransferase domain DM57_944 PF02390 Putative methyltransferase DM57_945 PF02673 DM57_945 DM57_946 PF07273 Protein of unknown function (DUF1439) DM57_948 PF04055 Radical SAM superfamily DM57_948 PF06969 HemN C-terminal domain DM57_95 PF00550 Phosphopantetheine attachment site DM57_95 PF00975 Thioesterase domain DM57_950 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DM57_951 PF00581 Rhodanese-like domain DM57_952 PF00202 Aminotransferase class-III DM57_953 PF13433 Periplasmic binding protein domain DM57_954 PF02653 DM57_954 DM57_956 PF13276 DM57_956 DM57_956 PF13683 DM57_956 DM57_957 PF01527 Transposase DM57_958 PF00005 ABC transporter DM57_958 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM57_959 PF00005 ABC transporter DM57_96 PF03621 MbtH-like protein DM57_960 PF01774 UreD urease accessory protein DM57_961 PF00547 Urease, gamma subunit DM57_962 PF00699 Urease beta subunit DM57_963 PF00449 Urease alpha-subunit, N-terminal domain DM57_963 PF01979 Amidohydrolase family DM57_964 PF02814 UreE urease accessory protein, N-terminal domain DM57_964 PF05194 UreE urease accessory protein, C-terminal domain DM57_965 PF01730 UreF DM57_966 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM57_967 PF00534 Glycosyl transferases group 1 DM57_967 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DM57_968 PF11004 DM57_968 DM57_969 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM57_97 PF13621 Cupin-like domain DM57_970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM57_970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM57_970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM57_970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM57_971 PF01943 DM57_971 DM57_972 PF00535 Glycosyl transferase family 2 DM57_973 PF13477 Glycosyl transferase 4-like DM57_973 PF13692 Glycosyl transferases group 1 DM57_974 PF16363 DM57_974 DM57_975 PF00953 Glycosyl transferase family 4 DM57_976 PF01527 Transposase DM57_977 PF13276 DM57_977 DM57_977 PF13683 DM57_977 DM57_978 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease DM57_979 PF02567 Phenazine biosynthesis-like protein DM57_980 PF00563 EAL domain DM57_980 PF00990 GGDEF domain DM57_980 PF02743 Cache domain DM57_981 PF02417 DM57_981 DM57_982 PF00850 Histone deacetylase domain DM57_983 PF01546 Peptidase family M20/M25/M40 DM57_984 PF00083 Sugar (and other) transporter DM57_985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_985 PF03466 LysR substrate binding domain DM57_986 PF05232 DM57_986 DM57_987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM57_987 PF03466 LysR substrate binding domain DM57_988 PF05425 DM57_988 DM57_989 PF00521 DNA gyrase/topoisomerase IV, subunit A DM57_99 PF00155 Aminotransferase class I and II DM57_990 PF00204 DNA gyrase B DM57_990 PF00986 DNA gyrase B subunit, carboxyl terminus DM57_990 PF01751 Toprim domain DM57_990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM57_991 PF00005 ABC transporter DM57_991 PF12848 ABC transporter DM57_991 PF16326 DM57_991 DM57_992 PF14347 DM57_992 DM57_993 PF00301 Rubredoxin DM57_994 PF10067 DM57_994 DM57_995 PF00561 alpha/beta hydrolase fold DM57_996 PF01176 Translation initiation factor 1A / IF-1 DM57_999 PF01527 Transposase