DM57_05110 SM00014 Acid phosphatase homologues DM57_05150 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_05170 SM00100 Cyclic nucleotide-monophosphate binding domain DM57_05170 SM00419 helix_turn_helix, cAMP Regulatory protein DM57_05240 SM00882 Coenzyme A transferase DM57_05245 SM00882 Coenzyme A transferase DM57_05250 SM00998 Adenylosuccinate lyase C-terminus DM57_05320 SM00382 ATPases associated with a variety of cellular activities DM57_05345 SM00528 Domain in histone-like proteins of HNS family DM57_05360 SM00387 Histidine kinase-like ATPases DM57_05360 SM00388 His Kinase A (phosphoacceptor) domain DM57_05365 SM00382 ATPases associated with a variety of cellular activities DM57_05365 SM00448 cheY-homologous receiver domain DM57_05385 SM00342 helix_turn_helix, arabinose operon control protein DM57_05440 SM00944 Pro-kumamolisin, activation domain DM57_05455 SM00267 diguanylate cyclase DM57_05475 SM00822 DM57_05475 DM57_05525 SM01133 DM57_05525 DM57_05540 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DM57_05550 SM00749 bacterial OsmY and nodulation domain DM57_05575 SM00382 ATPases associated with a variety of cellular activities DM57_05620 SM00829 Enoylreductase DM57_05635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_05635 SM01049 DM57_05635 DM57_05640 SM00387 Histidine kinase-like ATPases DM57_05640 SM00448 cheY-homologous receiver domain DM57_05650 SM00382 ATPases associated with a variety of cellular activities DM57_05690 SM00382 ATPases associated with a variety of cellular activities DM57_05705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_05725 SM00749 bacterial OsmY and nodulation domain DM57_05760 SM00829 Enoylreductase DM57_05765 SM00100 Cyclic nucleotide-monophosphate binding domain DM57_05765 SM00419 helix_turn_helix, cAMP Regulatory protein DM57_05770 SM00822 DM57_05770 DM57_05780 SM00849 Metallo-beta-lactamase superfamily DM57_05780 SM01027 Beta-Casp domain DM57_05800 SM00421 helix_turn_helix, Lux Regulon DM57_05800 SM00448 cheY-homologous receiver domain DM57_05805 SM00387 Histidine kinase-like ATPases DM57_05805 SM01049 DM57_05805 DM57_05905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_05930 SM00829 Enoylreductase DM57_05940 SM00421 helix_turn_helix, Lux Regulon DM57_05965 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_06040 SM00861 Transketolase, pyrimidine binding domain DM57_06065 SM00903 Flavin reductase like domain DM57_06115 SM00382 ATPases associated with a variety of cellular activities DM57_06115 SM00448 cheY-homologous receiver domain DM57_06160 SM00382 ATPases associated with a variety of cellular activities DM57_06165 SM00382 ATPases associated with a variety of cellular activities DM57_06165 SM00448 cheY-homologous receiver domain DM57_06180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DM57_06180 SM00091 PAS domain DM57_06180 SM00387 Histidine kinase-like ATPases DM57_06180 SM00388 His Kinase A (phosphoacceptor) domain DM57_06180 SM00448 cheY-homologous receiver domain DM57_06200 SM00822 DM57_06200 DM57_06315 SM00346 helix_turn_helix isocitrate lyase regulation DM57_06340 SM00487 DEAD-like helicases superfamily DM57_06340 SM00490 helicase superfamily c-terminal domain DM57_06385 SM00062 Bacterial periplasmic substrate-binding proteins DM57_06445 SM00829 Enoylreductase DM57_06495 SM00382 ATPases associated with a variety of cellular activities DM57_06495 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_06575 SM00342 helix_turn_helix, arabinose operon control protein DM57_06610 SM00797 Allophanate hydrolase subunit 2 DM57_06615 SM00796 Allophanate hydrolase subunit 1 DM57_06620 SM00878 Biotin carboxylase C-terminal domain DM57_06660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_06660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_06670 SM00091 PAS domain DM57_06670 SM00382 ATPases associated with a variety of cellular activities DM57_06715 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_06720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_06720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_06720 SM00319 Homologues of the ligand binding domain of Tar DM57_06865 SM00382 ATPases associated with a variety of cellular activities DM57_06910 SM00382 ATPases associated with a variety of cellular activities DM57_06945 SM00382 ATPases associated with a variety of cellular activities DM57_06965 SM00829 Enoylreductase DM57_06975 SM01120 DM57_06975 DM57_07110 SM00460 Transglutaminase/protease-like homologues DM57_07115 SM00460 Transglutaminase/protease-like homologues DM57_07125 SM00460 Transglutaminase/protease-like homologues DM57_07145 SM00342 helix_turn_helix, arabinose operon control protein DM57_07215 SM00912 haemagglutination activity domain DM57_07245 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_07245 SM00866 DM57_07245 DM57_07280 SM00342 helix_turn_helix, arabinose operon control protein DM57_07320 SM00344 helix_turn_helix ASNC type DM57_07350 SM01329 DM57_07350 DM57_07360 SM00859 Semialdehyde dehydrogenase, NAD binding domain DM57_07485 SM00411 bacterial (prokaryotic) histone like domain DM57_07515 SM00062 Bacterial periplasmic substrate-binding proteins DM57_07540 SM00382 ATPases associated with a variety of cellular activities DM57_07545 SM00062 Bacterial periplasmic substrate-binding proteins DM57_07555 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_07660 SM00458 Ricin-type beta-trefoil DM57_07665 SM00448 cheY-homologous receiver domain DM57_07670 SM00897 FIST N domain DM57_07670 SM01204 DM57_07670 DM57_07675 SM00387 Histidine kinase-like ATPases DM57_07675 SM00388 His Kinase A (phosphoacceptor) domain DM57_07750 SM00824 Thioesterase DM57_07775 SM00382 ATPases associated with a variety of cellular activities DM57_07860 SM00342 helix_turn_helix, arabinose operon control protein DM57_07885 SM00387 Histidine kinase-like ATPases DM57_07890 SM00448 cheY-homologous receiver domain DM57_07890 SM00862 Transcriptional regulatory protein, C terminal DM57_07900 SM00382 ATPases associated with a variety of cellular activities DM57_08005 SM00530 Helix-turn-helix XRE-family like proteins DM57_08070 SM00382 ATPases associated with a variety of cellular activities DM57_08095 SM00421 helix_turn_helix, Lux Regulon DM57_08125 SM00344 helix_turn_helix ASNC type DM57_08135 SM00944 Pro-kumamolisin, activation domain DM57_08170 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_08185 SM00862 Transcriptional regulatory protein, C terminal DM57_08225 SM00342 helix_turn_helix, arabinose operon control protein DM57_08250 SM00382 ATPases associated with a variety of cellular activities DM57_08305 SM00528 Domain in histone-like proteins of HNS family DM57_08350 SM00421 helix_turn_helix, Lux Regulon DM57_08350 SM00448 cheY-homologous receiver domain DM57_08365 SM00342 helix_turn_helix, arabinose operon control protein DM57_08425 SM00346 helix_turn_helix isocitrate lyase regulation DM57_08440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_08475 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_08485 SM00346 helix_turn_helix isocitrate lyase regulation DM57_08575 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_08575 SM00895 DM57_08575 DM57_08595 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_08620 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM57_08625 SM00822 DM57_08625 DM57_08625 SM00823 Phosphopantetheine attachment site DM57_08625 SM00825 Beta-ketoacyl synthase DM57_08625 SM00826 DM57_08625 DM57_08625 SM01294 DM57_08625 DM57_08645 SM00508 Cysteine-rich motif following a subset of SET domains DM57_08650 SM00822 DM57_08650 DM57_08650 SM00823 Phosphopantetheine attachment site DM57_08650 SM00824 Thioesterase DM57_08650 SM00825 Beta-ketoacyl synthase DM57_08650 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_08650 SM01294 DM57_08650 DM57_08660 SM00421 helix_turn_helix, Lux Regulon DM57_08675 SM00382 ATPases associated with a variety of cellular activities DM57_08675 SM00930 DM57_08675 DM57_08700 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_08700 SM00895 DM57_08700 DM57_08760 SM01130 DM57_08760 DM57_08785 SM00342 helix_turn_helix, arabinose operon control protein DM57_08820 SM00905 Dihydroneopterin aldolase DM57_08830 SM00357 Cold shock protein domain DM57_08865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DM57_08865 SM00091 PAS domain DM57_08865 SM00387 Histidine kinase-like ATPases DM57_08865 SM00388 His Kinase A (phosphoacceptor) domain DM57_08870 SM00448 cheY-homologous receiver domain DM57_08875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DM57_08875 SM00091 PAS domain DM57_08875 SM00387 Histidine kinase-like ATPases DM57_08875 SM00448 cheY-homologous receiver domain DM57_08955 SM00450 Rhodanese Homology Domain DM57_08965 SM00530 Helix-turn-helix XRE-family like proteins DM57_08990 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM57_09040 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_09040 SM00866 DM57_09040 DM57_09055 SM00344 helix_turn_helix ASNC type DM57_09070 SM00342 helix_turn_helix, arabinose operon control protein DM57_09095 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM57_09205 SM00267 diguanylate cyclase DM57_09250 SM00487 DEAD-like helicases superfamily DM57_09250 SM00490 helicase superfamily c-terminal domain DM57_09285 SM00382 ATPases associated with a variety of cellular activities DM57_09365 SM00823 Phosphopantetheine attachment site DM57_09365 SM01294 DM57_09365 DM57_09375 SM00823 Phosphopantetheine attachment site DM57_09375 SM00825 Beta-ketoacyl synthase DM57_09375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_09375 SM01294 DM57_09375 DM57_09405 SM00448 cheY-homologous receiver domain DM57_09405 SM00862 Transcriptional regulatory protein, C terminal DM57_09410 SM00387 Histidine kinase-like ATPases DM57_09410 SM00388 His Kinase A (phosphoacceptor) domain DM57_09430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM57_09470 SM00387 Histidine kinase-like ATPases DM57_09470 SM00388 His Kinase A (phosphoacceptor) domain DM57_09475 SM00448 cheY-homologous receiver domain DM57_09475 SM00862 Transcriptional regulatory protein, C terminal DM57_09500 SM00342 helix_turn_helix, arabinose operon control protein DM57_09595 SM00421 helix_turn_helix, Lux Regulon DM57_09600 SM00421 helix_turn_helix, Lux Regulon DM57_09615 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM57_09625 SM00342 helix_turn_helix, arabinose operon control protein DM57_09650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_09650 SM00387 Histidine kinase-like ATPases DM57_09650 SM00388 His Kinase A (phosphoacceptor) domain DM57_09655 SM00448 cheY-homologous receiver domain DM57_09655 SM00862 Transcriptional regulatory protein, C terminal DM57_09670 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_09710 SM00829 Enoylreductase DM57_09720 SM00382 ATPases associated with a variety of cellular activities DM57_09735 SM00448 cheY-homologous receiver domain DM57_09735 SM00862 Transcriptional regulatory protein, C terminal DM57_09740 SM00387 Histidine kinase-like ATPases DM57_09740 SM00388 His Kinase A (phosphoacceptor) domain DM57_09770 SM01005 Alanine racemase, C-terminal domain DM57_09845 SM00382 ATPases associated with a variety of cellular activities DM57_09870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM57_09935 SM00487 DEAD-like helicases superfamily DM57_09935 SM00490 helicase superfamily c-terminal domain DM57_1 SM00382 ATPases associated with a variety of cellular activities DM57_10055 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_1018 SM00904 Riboflavin kinase DM57_10225 SM00421 helix_turn_helix, Lux Regulon DM57_10250 SM00342 helix_turn_helix, arabinose operon control protein DM57_1028 SM00838 Elongation factor G C-terminus DM57_1028 SM00889 Elongation factor G, domain IV DM57_10280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM57_10305 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_1032 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_1032 SM00866 DM57_1032 DM57_10330 SM00421 helix_turn_helix, Lux Regulon DM57_10355 SM00346 helix_turn_helix isocitrate lyase regulation DM57_1036 SM00052 Putative diguanylate phosphodiesterase DM57_10390 SM00346 helix_turn_helix isocitrate lyase regulation DM57_104 SM00822 DM57_104 DM57_1040 SM00100 Cyclic nucleotide-monophosphate binding domain DM57_1040 SM00419 helix_turn_helix, cAMP Regulatory protein DM57_10455 SM00344 helix_turn_helix ASNC type DM57_10515 SM00062 Bacterial periplasmic substrate-binding proteins DM57_10520 SM00422 helix_turn_helix, mercury resistance DM57_1054 SM00357 Cold shock protein domain DM57_10540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_10540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_1056 SM00382 ATPases associated with a variety of cellular activities DM57_1056 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_10610 SM00257 Lysin motif DM57_10635 SM00382 ATPases associated with a variety of cellular activities DM57_1064 SM00822 DM57_1064 DM57_1064 SM00823 Phosphopantetheine attachment site DM57_1064 SM00825 Beta-ketoacyl synthase DM57_1064 SM00826 DM57_1064 DM57_1064 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_1064 SM00829 Enoylreductase DM57_1064 SM01294 DM57_1064 DM57_10640 SM00382 ATPases associated with a variety of cellular activities DM57_10705 SM00869 Autotransporter beta-domain DM57_10725 SM00835 Cupin DM57_10750 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_10765 SM00831 Cation transporter/ATPase, N-terminus DM57_108 SM00421 helix_turn_helix, Lux Regulon DM57_1080 SM00382 ATPases associated with a variety of cellular activities DM57_10825 SM00382 ATPases associated with a variety of cellular activities DM57_10880 SM00448 cheY-homologous receiver domain DM57_10885 SM00850 LytTr DNA-binding domain DM57_10890 SM01060 DM57_10890 DM57_109 SM00882 Coenzyme A transferase DM57_10900 SM00342 helix_turn_helix, arabinose operon control protein DM57_1091 SM00853 MutL C terminal dimerisation domain DM57_1091 SM01340 DM57_1091 DM57_10910 SM00028 Tetratricopeptide repeats DM57_10915 SM00825 Beta-ketoacyl synthase DM57_10965 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_10975 SM00822 DM57_10975 DM57_10975 SM00823 Phosphopantetheine attachment site DM57_10975 SM00825 Beta-ketoacyl synthase DM57_10975 SM01294 DM57_10975 DM57_10980 SM00822 DM57_10980 DM57_10980 SM00823 Phosphopantetheine attachment site DM57_10980 SM00825 Beta-ketoacyl synthase DM57_10980 SM00826 DM57_10980 DM57_10980 SM01294 DM57_10980 DM57_10990 SM00825 Beta-ketoacyl synthase DM57_110 SM00882 Coenzyme A transferase DM57_11000 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_11005 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_11010 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_1102 SM00271 DnaJ molecular chaperone homology domain DM57_11045 SM00342 helix_turn_helix, arabinose operon control protein DM57_1106 SM00363 S4 RNA-binding domain DM57_11065 SM00867 YceI-like domain DM57_11090 SM00965 Secretin and TonB N terminus short domain DM57_1110 SM00382 ATPases associated with a variety of cellular activities DM57_11130 SM00824 Thioesterase DM57_11140 SM00923 MbtH-like protein DM57_11145 SM00823 Phosphopantetheine attachment site DM57_11185 SM00829 Enoylreductase DM57_11200 SM00822 DM57_11200 DM57_1121 SM00342 helix_turn_helix, arabinose operon control protein DM57_1125 SM00363 S4 RNA-binding domain DM57_11255 SM00448 cheY-homologous receiver domain DM57_11255 SM01012 DM57_11255 DM57_1127 SM00855 Phosphoglycerate mutase family DM57_11280 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_1130 SM00382 ATPases associated with a variety of cellular activities DM57_1131 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM57_11310 SM00342 helix_turn_helix, arabinose operon control protein DM57_11315 SM00382 ATPases associated with a variety of cellular activities DM57_11320 SM00829 Enoylreductase DM57_1133 SM00798 AICARFT/IMPCHase bienzyme DM57_1133 SM00851 MGS-like domain DM57_11350 SM00420 helix_turn_helix, Deoxyribose operon repressor DM57_11350 SM01134 DM57_11350 DM57_1137 SM01011 Aminopeptidase P, N-terminal domain DM57_1143 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DM57_1143 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DM57_11445 SM00320 WD40 repeats DM57_1148 SM00981 DM57_1148 DM57_11485 SM00382 ATPases associated with a variety of cellular activities DM57_11540 SM00448 cheY-homologous receiver domain DM57_11540 SM00862 Transcriptional regulatory protein, C terminal DM57_11545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_11545 SM00387 Histidine kinase-like ATPases DM57_11545 SM00388 His Kinase A (phosphoacceptor) domain DM57_1156 SM00867 YceI-like domain DM57_1157 SM00867 YceI-like domain DM57_1161 SM01323 DM57_1161 DM57_1164 SM00487 DEAD-like helicases superfamily DM57_1164 SM00490 helicase superfamily c-terminal domain DM57_11655 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DM57_11685 SM00387 Histidine kinase-like ATPases DM57_11685 SM00388 His Kinase A (phosphoacceptor) domain DM57_11690 SM00448 cheY-homologous receiver domain DM57_11690 SM00862 Transcriptional regulatory protein, C terminal DM57_1172 SM00072 Guanylate kinase homologues. DM57_11725 SM01150 DM57_11725 DM57_1174 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_1174 SM00866 DM57_1174 DM57_11745 SM00155 Phospholipase D. Active site motifs. DM57_11750 SM00420 helix_turn_helix, Deoxyribose operon repressor DM57_11750 SM01134 DM57_11750 DM57_11765 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_11765 SM00895 DM57_11765 DM57_11770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM57_11775 SM00829 Enoylreductase DM57_1179 SM00382 ATPases associated with a variety of cellular activities DM57_118 SM00954 Region found in RelA / SpoT proteins DM57_1180 SM00382 ATPases associated with a variety of cellular activities DM57_1182 SM00382 ATPases associated with a variety of cellular activities DM57_11830 SM00644 DM57_11830 DM57_11860 SM00448 cheY-homologous receiver domain DM57_11860 SM00862 Transcriptional regulatory protein, C terminal DM57_11865 SM00387 Histidine kinase-like ATPases DM57_11900 SM00382 ATPases associated with a variety of cellular activities DM57_11900 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_11990 SM00528 Domain in histone-like proteins of HNS family DM57_11995 SM00530 Helix-turn-helix XRE-family like proteins DM57_120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM57_1203 SM00883 Chaperonin 10 Kd subunit DM57_12055 SM00421 helix_turn_helix, Lux Regulon DM57_12055 SM00448 cheY-homologous receiver domain DM57_1206 SM00382 ATPases associated with a variety of cellular activities DM57_12080 SM00530 Helix-turn-helix XRE-family like proteins DM57_1209 SM00062 Bacterial periplasmic substrate-binding proteins DM57_1212 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DM57_12160 SM01359 DM57_12160 DM57_12160 SM01360 DM57_12160 DM57_12175 SM00448 cheY-homologous receiver domain DM57_12180 SM00091 PAS domain DM57_12180 SM00387 Histidine kinase-like ATPases DM57_12225 SM00344 helix_turn_helix ASNC type DM57_12230 SM00052 Putative diguanylate phosphodiesterase DM57_12230 SM00267 diguanylate cyclase DM57_12265 SM00052 Putative diguanylate phosphodiesterase DM57_12275 SM00346 helix_turn_helix isocitrate lyase regulation DM57_12325 SM00822 DM57_12325 DM57_1235 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_1235 SM00895 DM57_1235 DM57_12350 SM00858 DM57_12350 DM57_12360 SM00382 ATPases associated with a variety of cellular activities DM57_1237 SM00947 Carbonic anhydrase DM57_12370 SM00346 helix_turn_helix isocitrate lyase regulation DM57_1238 SM01116 DM57_1238 DM57_1240 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DM57_1241 SM00861 Transketolase, pyrimidine binding domain DM57_12440 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_12460 SM00421 helix_turn_helix, Lux Regulon DM57_12460 SM00448 cheY-homologous receiver domain DM57_1247 SM00919 Malic enzyme, NAD binding domain DM57_1247 SM01274 DM57_1247 DM57_12495 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_12495 SM00895 DM57_12495 DM57_125 SM00873 B3/4 domain DM57_125 SM00874 tRNA synthetase B5 domain DM57_125 SM00896 Ferredoxin-fold anticodon binding domain DM57_1251 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DM57_1253 SM00822 DM57_1253 DM57_1255 SM00382 ATPases associated with a variety of cellular activities DM57_1257 SM00822 DM57_1257 DM57_12585 SM00421 helix_turn_helix, Lux Regulon DM57_126 SM00411 bacterial (prokaryotic) histone like domain DM57_1260 SM00346 helix_turn_helix isocitrate lyase regulation DM57_12630 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_12630 SM00895 DM57_12630 DM57_12645 SM01007 Class II Aldolase and Adducin N-terminal domain DM57_1265 SM00955 DM57_1265 DM57_12685 SM00342 helix_turn_helix, arabinose operon control protein DM57_12695 SM00382 ATPases associated with a variety of cellular activities DM57_127 SM00422 helix_turn_helix, mercury resistance DM57_12715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM57_1272 SM00878 Biotin carboxylase C-terminal domain DM57_12725 SM00226 Low molecular weight phosphatase family DM57_1282 SM00644 DM57_1282 DM57_12825 SM00925 MltA specific insert domain DM57_1285 SM00382 ATPases associated with a variety of cellular activities DM57_1285 SM00962 SRP54-type protein, GTPase domain DM57_1285 SM00963 SRP54-type protein, helical bundle domain DM57_12870 SM01118 DM57_12870 DM57_12875 SM00986 Uracil DNA glycosylase superfamily DM57_12875 SM00987 UreE urease accessory protein, C-terminal domain DM57_12885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM57_1291 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DM57_12925 SM00342 helix_turn_helix, arabinose operon control protein DM57_12955 SM00382 ATPases associated with a variety of cellular activities DM57_13000 SM00937 DM57_13000 DM57_1303 SM01091 Transporter associated domain DM57_1304 SM00382 ATPases associated with a variety of cellular activities DM57_13070 SM00342 helix_turn_helix, arabinose operon control protein DM57_1310 SM00382 ATPases associated with a variety of cellular activities DM57_1312 SM00957 SecA DEAD-like domain DM57_1312 SM00958 SecA preprotein cross-linking domain DM57_13150 SM00989 DM57_13150 DM57_1316 SM00864 Tubulin/FtsZ family, GTPase domain DM57_1316 SM00865 Tubulin/FtsZ family, C-terminal domain DM57_13165 SM00342 helix_turn_helix, arabinose operon control protein DM57_1317 SM00842 Cell division protein FtsA DM57_13180 SM00640 Glycosyl hydrolases family 32 DM57_13290 SM00382 ATPases associated with a variety of cellular activities DM57_13290 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_13355 SM00382 ATPases associated with a variety of cellular activities DM57_13360 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_13395 SM00257 Lysin motif DM57_13410 SM01350 DM57_13410 DM57_13465 SM00382 ATPases associated with a variety of cellular activities DM57_13465 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_13505 SM00219 Tyrosine kinase, catalytic domain DM57_1352 SM00344 helix_turn_helix ASNC type DM57_1356 SM00919 Malic enzyme, NAD binding domain DM57_1356 SM01274 DM57_1356 DM57_13590 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM57_13590 SM00450 Rhodanese Homology Domain DM57_13595 SM00849 Metallo-beta-lactamase superfamily DM57_1360 SM00859 Semialdehyde dehydrogenase, NAD binding domain DM57_13640 SM00346 helix_turn_helix isocitrate lyase regulation DM57_13655 SM00881 CoA binding domain DM57_13660 SM00528 Domain in histone-like proteins of HNS family DM57_13680 SM00382 ATPases associated with a variety of cellular activities DM57_13695 SM00450 Rhodanese Homology Domain DM57_13705 SM00382 ATPases associated with a variety of cellular activities DM57_1371 SM01004 Delta-aminolevulinic acid dehydratase DM57_13710 SM00382 ATPases associated with a variety of cellular activities DM57_13730 SM00530 Helix-turn-helix XRE-family like proteins DM57_1375 SM00662 RNA polymerases D DM57_1376 SM00363 S4 RNA-binding domain DM57_1376 SM01390 DM57_1376 DM57_13785 SM00400 zinc finger DM57_13785 SM00493 DM57_13785 DM57_13785 SM00766 DNA primase DnaG DnaB-binding DM57_1380 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_13820 SM00861 Transketolase, pyrimidine binding domain DM57_13840 SM00450 Rhodanese Homology Domain DM57_13865 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DM57_13865 SM00474 3'-5' exonuclease DM57_13865 SM00475 5'-3' exonuclease DM57_13865 SM00482 DNA polymerase A domain DM57_1391 SM01374 DM57_1391 DM57_13925 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_13945 SM00014 Acid phosphatase homologues DM57_1395 SM00322 K homology RNA-binding domain DM57_13960 SM00382 ATPases associated with a variety of cellular activities DM57_13970 SM00880 DM57_13970 DM57_1398 SM01382 DM57_1398 DM57_1398 SM01383 DM57_1398 DM57_13990 SM00388 His Kinase A (phosphoacceptor) domain DM57_13995 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_13995 SM01091 Transporter associated domain DM57_1402 SM01403 DM57_1402 DM57_14035 SM00342 helix_turn_helix, arabinose operon control protein DM57_1404 SM00838 Elongation factor G C-terminus DM57_1404 SM00889 Elongation factor G, domain IV DM57_1407 SM00341 Helicase and RNase D C-terminal DM57_1407 SM00487 DEAD-like helicases superfamily DM57_1407 SM00490 helicase superfamily c-terminal domain DM57_1407 SM00956 DM57_1407 DM57_14085 SM00644 DM57_14085 DM57_1409 SM00663 RNA polymerase I subunit A N-terminus DM57_1414 SM00649 Ribosomal protein L11/L12 DM57_14145 SM00829 Enoylreductase DM57_1415 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DM57_1415 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DM57_14155 SM00822 DM57_14155 DM57_14170 SM00855 Phosphoglycerate mutase family DM57_14215 SM00382 ATPases associated with a variety of cellular activities DM57_14225 SM00342 helix_turn_helix, arabinose operon control protein DM57_14265 SM00448 cheY-homologous receiver domain DM57_14270 SM00073 Histidine Phosphotransfer domain DM57_14270 SM00260 Two component signalling adaptor domain DM57_14270 SM00387 Histidine kinase-like ATPases DM57_14270 SM00448 cheY-homologous receiver domain DM57_14275 SM00260 Two component signalling adaptor domain DM57_14280 SM00028 Tetratricopeptide repeats DM57_14280 SM00138 Methyltransferase, chemotaxis proteins DM57_14285 SM00260 Two component signalling adaptor domain DM57_1429 SM01219 DM57_1429 DM57_14290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_14290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_14295 SM00387 Histidine kinase-like ATPases DM57_14295 SM00388 His Kinase A (phosphoacceptor) domain DM57_14295 SM00448 cheY-homologous receiver domain DM57_14340 SM00155 Phospholipase D. Active site motifs. DM57_1435 SM00965 Secretin and TonB N terminus short domain DM57_14370 SM00342 helix_turn_helix, arabinose operon control protein DM57_1438 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM57_14380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM57_1442 SM00382 ATPases associated with a variety of cellular activities DM57_14425 SM00342 helix_turn_helix, arabinose operon control protein DM57_1445 SM01321 DM57_1445 DM57_14465 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_1450 SM00382 ATPases associated with a variety of cellular activities DM57_14530 SM00052 Putative diguanylate phosphodiesterase DM57_14530 SM00267 diguanylate cyclase DM57_1455 SM00382 ATPases associated with a variety of cellular activities DM57_14565 SM00382 ATPases associated with a variety of cellular activities DM57_14575 SM00822 DM57_14575 DM57_14580 SM00822 DM57_14580 DM57_14580 SM00825 Beta-ketoacyl synthase DM57_14585 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_1461 SM00382 ATPases associated with a variety of cellular activities DM57_14615 SM00382 ATPases associated with a variety of cellular activities DM57_14625 SM00062 Bacterial periplasmic substrate-binding proteins DM57_14625 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DM57_14655 SM00091 PAS domain DM57_14655 SM00267 diguanylate cyclase DM57_14665 SM00448 cheY-homologous receiver domain DM57_14670 SM00387 Histidine kinase-like ATPases DM57_14670 SM00448 cheY-homologous receiver domain DM57_14700 SM00470 ParB-like nuclease domain DM57_14740 SM00530 Helix-turn-helix XRE-family like proteins DM57_14750 SM00829 Enoylreductase DM57_14755 SM00867 YceI-like domain DM57_14775 SM01329 DM57_14775 DM57_148 SM00363 S4 RNA-binding domain DM57_1480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM57_14950 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_1497 SM00422 helix_turn_helix, mercury resistance DM57_150 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_150 SM00322 K homology RNA-binding domain DM57_1501 SM00382 ATPases associated with a variety of cellular activities DM57_1503 SM00387 Histidine kinase-like ATPases DM57_1503 SM00388 His Kinase A (phosphoacceptor) domain DM57_15030 SM00342 helix_turn_helix, arabinose operon control protein DM57_1504 SM00448 cheY-homologous receiver domain DM57_1504 SM00862 Transcriptional regulatory protein, C terminal DM57_1509 SM00342 helix_turn_helix, arabinose operon control protein DM57_1510 SM00382 ATPases associated with a variety of cellular activities DM57_1511 SM00382 ATPases associated with a variety of cellular activities DM57_1533 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_1546 SM00382 ATPases associated with a variety of cellular activities DM57_15460 SM00357 Cold shock protein domain DM57_1549 SM00833 Cobalamin synthesis protein cobW C-terminal domain DM57_1559 SM00749 bacterial OsmY and nodulation domain DM57_157 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_1572 SM00769 Water Stress and Hypersensitive response DM57_1577 SM00382 ATPases associated with a variety of cellular activities DM57_1585 SM00382 ATPases associated with a variety of cellular activities DM57_1585 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_159 SM00861 Transketolase, pyrimidine binding domain DM57_1595 SM00996 S-adenosyl-L-homocysteine hydrolase DM57_1595 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM57_1606 SM00448 cheY-homologous receiver domain DM57_1607 SM00448 cheY-homologous receiver domain DM57_1609 SM00138 Methyltransferase, chemotaxis proteins DM57_1610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_1610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_1611 SM00260 Two component signalling adaptor domain DM57_1612 SM00073 Histidine Phosphotransfer domain DM57_1612 SM00260 Two component signalling adaptor domain DM57_1612 SM00387 Histidine kinase-like ATPases DM57_1612 SM01231 DM57_1612 DM57_1613 SM00448 cheY-homologous receiver domain DM57_1620 SM00528 Domain in histone-like proteins of HNS family DM57_1629 SM00028 Tetratricopeptide repeats DM57_1634 SM00822 DM57_1634 DM57_1646 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_1646 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_1669 SM00342 helix_turn_helix, arabinose operon control protein DM57_1680 SM00422 helix_turn_helix, mercury resistance DM57_1684 SM00062 Bacterial periplasmic substrate-binding proteins DM57_1692 SM00487 DEAD-like helicases superfamily DM57_1692 SM00490 helicase superfamily c-terminal domain DM57_1694 SM00062 Bacterial periplasmic substrate-binding proteins DM57_1698 SM00382 ATPases associated with a variety of cellular activities DM57_1707 SM00470 ParB-like nuclease domain DM57_1710 SM01228 DM57_1710 DM57_1711 SM00382 ATPases associated with a variety of cellular activities DM57_1712 SM00382 ATPases associated with a variety of cellular activities DM57_1719 SM00382 ATPases associated with a variety of cellular activities DM57_1720 SM00382 ATPases associated with a variety of cellular activities DM57_1724 SM01118 DM57_1724 DM57_1725 SM00344 helix_turn_helix ASNC type DM57_1729 SM00448 cheY-homologous receiver domain DM57_1729 SM00862 Transcriptional regulatory protein, C terminal DM57_1730 SM00387 Histidine kinase-like ATPases DM57_1730 SM00388 His Kinase A (phosphoacceptor) domain DM57_1731 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain DM57_1734 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_1738 SM00411 bacterial (prokaryotic) histone like domain DM57_174 SM00421 helix_turn_helix, Lux Regulon DM57_174 SM00448 cheY-homologous receiver domain DM57_1741 SM00849 Metallo-beta-lactamase superfamily DM57_1743 SM00344 helix_turn_helix ASNC type DM57_1745 SM00528 Domain in histone-like proteins of HNS family DM57_1760 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_1764 SM00382 ATPases associated with a variety of cellular activities DM57_1771 SM00464 Found in ATP-dependent protease La (LON) DM57_1772 SM00478 endonuclease III DM57_1773 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DM57_1773 SM01232 DM57_1773 DM57_1774 SM00028 Tetratricopeptide repeats DM57_1778 SM01400 DM57_1778 DM57_1785 SM00382 ATPases associated with a variety of cellular activities DM57_1785 SM00962 SRP54-type protein, GTPase domain DM57_1785 SM00963 SRP54-type protein, helical bundle domain DM57_1789 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_1801 SM00382 ATPases associated with a variety of cellular activities DM57_1804 SM00481 DNA polymerase alpha chain like domain DM57_1811 SM00382 ATPases associated with a variety of cellular activities DM57_1827 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_1827 SM00866 DM57_1827 DM57_1832 SM01081 Putative carbohydrate binding domain DM57_1841 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_1841 SM01049 DM57_1841 DM57_1858 SM00506 Appr-1"-p processing enzyme DM57_1862 SM00450 Rhodanese Homology Domain DM57_1863 SM00855 Phosphoglycerate mutase family DM57_1864 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM57_1864 SM00245 tail specific protease DM57_1873 SM00938 Nitrogen regulatory protein P-II DM57_1875 SM00382 ATPases associated with a variety of cellular activities DM57_1880 SM00382 ATPases associated with a variety of cellular activities DM57_1880 SM00448 cheY-homologous receiver domain DM57_1895 SM00829 Enoylreductase DM57_1897 SM00342 helix_turn_helix, arabinose operon control protein DM57_19 SM00382 ATPases associated with a variety of cellular activities DM57_1906 SM00387 Histidine kinase-like ATPases DM57_1906 SM00388 His Kinase A (phosphoacceptor) domain DM57_1907 SM00448 cheY-homologous receiver domain DM57_1908 SM00382 ATPases associated with a variety of cellular activities DM57_1908 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_1911 SM00833 Cobalamin synthesis protein cobW C-terminal domain DM57_1912 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DM57_1934 SM00382 ATPases associated with a variety of cellular activities DM57_1946 SM00421 helix_turn_helix, Lux Regulon DM57_1946 SM00448 cheY-homologous receiver domain DM57_1953 SM00382 ATPases associated with a variety of cellular activities DM57_196 SM01120 DM57_196 DM57_1961 SM00382 ATPases associated with a variety of cellular activities DM57_1962 SM00382 ATPases associated with a variety of cellular activities DM57_1967 SM00797 Allophanate hydrolase subunit 2 DM57_1968 SM00796 Allophanate hydrolase subunit 1 DM57_1978 SM00858 DM57_1978 DM57_198 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_198 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_1988 SM00047 Lysozyme subfamily 2 DM57_200 SM00382 ATPases associated with a variety of cellular activities DM57_2006 SM00387 Histidine kinase-like ATPases DM57_2006 SM00433 TopoisomeraseII DM57_2007 SM00480 DNA polymerase III beta subunit DM57_2008 SM00382 ATPases associated with a variety of cellular activities DM57_2008 SM00760 Bacterial dnaA protein helix-turn-helix domain DM57_2011 SM01234 DM57_2011 DM57_2017 SM01322 DM57_2017 DM57_2019 SM00342 helix_turn_helix, arabinose operon control protein DM57_2020 SM00478 endonuclease III DM57_2020 SM01009 AlkA N-terminal domain DM57_203 SM00710 Parallel beta-helix repeats DM57_203 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses DM57_204 SM00382 ATPases associated with a variety of cellular activities DM57_2041 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DM57_2041 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DM57_2041 SM00493 DM57_2041 DM57_2050 SM00091 PAS domain DM57_2050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_2050 SM00387 Histidine kinase-like ATPases DM57_2050 SM00388 His Kinase A (phosphoacceptor) domain DM57_2051 SM00448 cheY-homologous receiver domain DM57_2057 SM00671 Sel1-like repeats. DM57_2065 SM00845 GatB domain DM57_2069 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_2075 SM00936 Penicillin-binding protein 5, C-terminal domain DM57_2081 SM00382 ATPases associated with a variety of cellular activities DM57_2084 SM00671 Sel1-like repeats. DM57_2096 SM00346 helix_turn_helix isocitrate lyase regulation DM57_210 SM00900 DM57_210 DM57_2100 SM01018 B12 binding domain DM57_2103 SM00836 DALR anticodon binding domain DM57_2103 SM01016 Arginyl tRNA synthetase N terminal dom DM57_2108 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_2111 SM00382 ATPases associated with a variety of cellular activities DM57_2112 SM00849 Metallo-beta-lactamase superfamily DM57_2114 SM00947 Carbonic anhydrase DM57_2122 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_2122 SM00876 Biotin and Thiamin Synthesis associated domain DM57_2125 SM00098 Alkaline phosphatase homologues DM57_2126 SM00098 Alkaline phosphatase homologues DM57_2134 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_2135 SM00354 helix_turn _helix lactose operon repressor DM57_2142 SM00905 Dihydroneopterin aldolase DM57_2155 SM00746 metallochaperone-like domain DM57_2179 SM00240 Forkhead associated domain DM57_2180 SM00220 Serine/Threonine protein kinases, catalytic domain DM57_2184 SM01007 Class II Aldolase and Adducin N-terminal domain DM57_2185 SM00052 Putative diguanylate phosphodiesterase DM57_2185 SM00267 diguanylate cyclase DM57_2192 SM00382 ATPases associated with a variety of cellular activities DM57_2200 SM00419 helix_turn_helix, cAMP Regulatory protein DM57_2206 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DM57_2210 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_2212 SM01119 DM57_2212 DM57_222 SM00344 helix_turn_helix ASNC type DM57_2223 SM00978 DM57_2223 DM57_2227 SM00834 Putative regulatory protein DM57_2231 SM00155 Phospholipase D. Active site motifs. DM57_2240 SM00382 ATPases associated with a variety of cellular activities DM57_2246 SM00650 Ribosomal RNA adenine dimethylases DM57_2250 SM00563 Phosphate acyltransferases DM57_2252 SM00836 DALR anticodon binding domain DM57_2255 SM01091 Transporter associated domain DM57_2259 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_2262 SM00530 Helix-turn-helix XRE-family like proteins DM57_2276 SM00420 helix_turn_helix, Deoxyribose operon repressor DM57_2276 SM01134 DM57_2276 DM57_2280 SM00487 DEAD-like helicases superfamily DM57_2280 SM00490 helicase superfamily c-terminal domain DM57_2284 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM57_2287 SM00387 Histidine kinase-like ATPases DM57_2289 SM00448 cheY-homologous receiver domain DM57_2291 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DM57_2291 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_2300 SM00881 CoA binding domain DM57_2304 SM00382 ATPases associated with a variety of cellular activities DM57_2305 SM00448 cheY-homologous receiver domain DM57_2305 SM00862 Transcriptional regulatory protein, C terminal DM57_2306 SM00387 Histidine kinase-like ATPases DM57_2306 SM00388 His Kinase A (phosphoacceptor) domain DM57_231 SM00354 helix_turn _helix lactose operon repressor DM57_2326 SM01001 AIR carboxylase DM57_2333 SM00448 cheY-homologous receiver domain DM57_2333 SM00862 Transcriptional regulatory protein, C terminal DM57_2334 SM00387 Histidine kinase-like ATPases DM57_2334 SM00388 His Kinase A (phosphoacceptor) domain DM57_2335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM57_2349 SM00342 helix_turn_helix, arabinose operon control protein DM57_2350 SM00829 Enoylreductase DM57_2353 SM00382 ATPases associated with a variety of cellular activities DM57_2356 SM00822 DM57_2356 DM57_2363 SM00382 ATPases associated with a variety of cellular activities DM57_2380 SM00903 Flavin reductase like domain DM57_2381 SM00344 helix_turn_helix ASNC type DM57_2390 SM00646 DM57_2390 DM57_2397 SM01207 DM57_2397 DM57_240 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_2408 SM00382 ATPases associated with a variety of cellular activities DM57_2412 SM00382 ATPases associated with a variety of cellular activities DM57_2417 SM00852 Probable molybdopterin binding domain DM57_2418 SM00479 DM57_2418 DM57_2433 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_2434 SM00344 helix_turn_helix ASNC type DM57_2438 SM00893 Electron transfer flavoprotein domain DM57_2439 SM00893 Electron transfer flavoprotein domain DM57_2442 SM00382 ATPases associated with a variety of cellular activities DM57_2442 SM00930 DM57_2442 DM57_2447 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM57_245 SM00422 helix_turn_helix, mercury resistance DM57_2450 SM00984 UDP binding domain DM57_2451 SM00028 Tetratricopeptide repeats DM57_2454 SM00411 bacterial (prokaryotic) histone like domain DM57_2455 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_2458 SM00830 Chorismate mutase type II DM57_2461 SM00434 DNA Topoisomerase IV DM57_2468 SM00650 Ribosomal RNA adenine dimethylases DM57_2472 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM57_2473 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_2473 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM57_2476 SM00028 Tetratricopeptide repeats DM57_249 SM00870 DM57_249 DM57_2501 SM00830 Chorismate mutase type II DM57_2510 SM01329 DM57_2510 DM57_2516 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM57_2536 SM00852 Probable molybdopterin binding domain DM57_2538 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_2539 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_2540 SM00363 S4 RNA-binding domain DM57_2550 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM57_2551 SM00822 DM57_2551 DM57_2553 SM00825 Beta-ketoacyl synthase DM57_2558 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM57_2560 SM00838 Elongation factor G C-terminus DM57_2562 SM00358 Double-stranded RNA binding motif DM57_2562 SM00535 Ribonuclease III family DM57_2568 SM00382 ATPases associated with a variety of cellular activities DM57_2568 SM00448 cheY-homologous receiver domain DM57_2569 SM00841 Elongation factor P, C-terminal DM57_2569 SM01185 DM57_2569 DM57_257 SM00248 ankyrin repeats DM57_2571 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM57_2571 SM00465 GIY-YIG type nucleases (URI domain) DM57_2585 SM00382 ATPases associated with a variety of cellular activities DM57_2595 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_26 SM00342 helix_turn_helix, arabinose operon control protein DM57_2604 SM00382 ATPases associated with a variety of cellular activities DM57_2605 SM00342 helix_turn_helix, arabinose operon control protein DM57_2613 SM00062 Bacterial periplasmic substrate-binding proteins DM57_2627 SM00382 ATPases associated with a variety of cellular activities DM57_2630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_2630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_2631 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_2633 SM00100 Cyclic nucleotide-monophosphate binding domain DM57_2633 SM00419 helix_turn_helix, cAMP Regulatory protein DM57_2649 SM00421 helix_turn_helix, Lux Regulon DM57_2653 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_2653 SM00866 DM57_2653 DM57_2660 SM01230 DM57_2660 DM57_267 SM00829 Enoylreductase DM57_2689 SM00382 ATPases associated with a variety of cellular activities DM57_269 SM00886 Stress responsive A/B Barrel Domain DM57_2692 SM00855 Phosphoglycerate mutase family DM57_2720 SM00972 Spore Coat Protein U domain DM57_2721 SM00972 Spore Coat Protein U domain DM57_2722 SM00530 Helix-turn-helix XRE-family like proteins DM57_2728 SM00028 Tetratricopeptide repeats DM57_2736 SM00938 Nitrogen regulatory protein P-II DM57_2738 SM00382 ATPases associated with a variety of cellular activities DM57_2741 SM00062 Bacterial periplasmic substrate-binding proteins DM57_2745 SM00448 cheY-homologous receiver domain DM57_2745 SM00862 Transcriptional regulatory protein, C terminal DM57_2746 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_2746 SM00387 Histidine kinase-like ATPases DM57_2746 SM00388 His Kinase A (phosphoacceptor) domain DM57_2749 SM00382 ATPases associated with a variety of cellular activities DM57_2778 SM00382 ATPases associated with a variety of cellular activities DM57_2783 SM00354 helix_turn _helix lactose operon repressor DM57_2787 SM00267 diguanylate cyclase DM57_2791 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_2792 SM00344 helix_turn_helix ASNC type DM57_28 SM00382 ATPases associated with a variety of cellular activities DM57_2805 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_281 SM01211 DM57_281 DM57_2830 SM00479 DM57_2830 DM57_2833 SM00849 Metallo-beta-lactamase superfamily DM57_2834 SM00257 Lysin motif DM57_2837 SM00342 helix_turn_helix, arabinose operon control protein DM57_2838 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DM57_2840 SM00851 MGS-like domain DM57_2840 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DM57_2843 SM01103 DM57_2843 DM57_2845 SM00382 ATPases associated with a variety of cellular activities DM57_285 SM00382 ATPases associated with a variety of cellular activities DM57_2851 SM00382 ATPases associated with a variety of cellular activities DM57_2853 SM00448 cheY-homologous receiver domain DM57_2853 SM00862 Transcriptional regulatory protein, C terminal DM57_2854 SM00387 Histidine kinase-like ATPases DM57_2854 SM00388 His Kinase A (phosphoacceptor) domain DM57_2866 SM00855 Phosphoglycerate mutase family DM57_2874 SM00257 Lysin motif DM57_2882 SM00422 helix_turn_helix, mercury resistance DM57_2883 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_2886 SM00642 Alpha-amylase domain DM57_2888 SM00642 Alpha-amylase domain DM57_2889 SM00642 Alpha-amylase domain DM57_2892 SM00642 Alpha-amylase domain DM57_2893 SM00642 Alpha-amylase domain DM57_2894 SM00060 Fibronectin type 3 domain DM57_2899 SM00448 cheY-homologous receiver domain DM57_2899 SM00862 Transcriptional regulatory protein, C terminal DM57_2903 SM00448 cheY-homologous receiver domain DM57_2903 SM00862 Transcriptional regulatory protein, C terminal DM57_2906 SM00028 Tetratricopeptide repeats DM57_2907 SM00528 Domain in histone-like proteins of HNS family DM57_2911 SM00458 Ricin-type beta-trefoil DM57_2911 SM00612 DM57_2911 DM57_2928 SM00972 Spore Coat Protein U domain DM57_2929 SM00972 Spore Coat Protein U domain DM57_2930 SM00972 Spore Coat Protein U domain DM57_2933 SM00972 Spore Coat Protein U domain DM57_2934 SM00387 Histidine kinase-like ATPases DM57_2934 SM00388 His Kinase A (phosphoacceptor) domain DM57_2934 SM00448 cheY-homologous receiver domain DM57_2935 SM00421 helix_turn_helix, Lux Regulon DM57_2935 SM00448 cheY-homologous receiver domain DM57_294 SM00382 ATPases associated with a variety of cellular activities DM57_294 SM00464 Found in ATP-dependent protease La (LON) DM57_295 SM00382 ATPases associated with a variety of cellular activities DM57_295 SM00994 ClpX C4-type zinc finger DM57_295 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_2950 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM57_2964 SM00382 ATPases associated with a variety of cellular activities DM57_2965 SM00382 ATPases associated with a variety of cellular activities DM57_2970 SM00382 ATPases associated with a variety of cellular activities DM57_2978 SM00448 cheY-homologous receiver domain DM57_2978 SM00862 Transcriptional regulatory protein, C terminal DM57_2980 SM00387 Histidine kinase-like ATPases DM57_2980 SM01080 DM57_2980 DM57_2987 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_299 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_3000 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_3001 SM00563 Phosphate acyltransferases DM57_301 SM00421 helix_turn_helix, Lux Regulon DM57_3014 SM00382 ATPases associated with a variety of cellular activities DM57_3018 SM00670 Large family of predicted nucleotide-binding domains DM57_3031 SM00852 Probable molybdopterin binding domain DM57_3036 SM00382 ATPases associated with a variety of cellular activities DM57_3036 SM01086 C-terminal, D2-small domain, of ClpB protein DM57_3039 SM00422 helix_turn_helix, mercury resistance DM57_3046 SM00422 helix_turn_helix, mercury resistance DM57_3047 SM00357 Cold shock protein domain DM57_3047 SM00382 ATPases associated with a variety of cellular activities DM57_3047 SM00959 Rho termination factor, N-terminal domain DM57_3049 SM00382 ATPases associated with a variety of cellular activities DM57_305 SM00155 Phospholipase D. Active site motifs. DM57_3051 SM00493 DM57_3051 DM57_3055 SM00257 Lysin motif DM57_3061 SM00562 DM57_3061 DM57_3063 SM00530 Helix-turn-helix XRE-family like proteins DM57_3067 SM00564 beta-propeller repeat DM57_3068 SM00382 ATPases associated with a variety of cellular activities DM57_3071 SM00244 prohibitin homologues DM57_3072 SM00244 prohibitin homologues DM57_3075 SM00788 Adenylosuccinate synthetase DM57_3078 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_3078 SM00732 Likely ribonuclease with RNase H fold. DM57_3081 SM00491 DM57_3081 DM57_3083 SM00363 S4 RNA-binding domain DM57_3089 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_3097 SM00382 ATPases associated with a variety of cellular activities DM57_3099 SM00382 ATPases associated with a variety of cellular activities DM57_3107 SM00382 ATPases associated with a variety of cellular activities DM57_3115 SM00858 DM57_3115 DM57_3121 SM00028 Tetratricopeptide repeats DM57_3124 SM00382 ATPases associated with a variety of cellular activities DM57_313 SM00448 cheY-homologous receiver domain DM57_313 SM00862 Transcriptional regulatory protein, C terminal DM57_3137 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_3137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_314 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_314 SM00387 Histidine kinase-like ATPases DM57_314 SM00388 His Kinase A (phosphoacceptor) domain DM57_3141 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_3141 SM00357 Cold shock protein domain DM57_3141 SM00955 DM57_3141 DM57_3142 SM00967 RNA 2'-O ribose methyltransferase substrate binding DM57_3143 SM00644 DM57_3143 DM57_3145 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_3145 SM00895 DM57_3145 DM57_3150 SM00062 Bacterial periplasmic substrate-binding proteins DM57_3150 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DM57_3163 SM00382 ATPases associated with a variety of cellular activities DM57_319 SM00487 DEAD-like helicases superfamily DM57_319 SM00490 helicase superfamily c-terminal domain DM57_319 SM00982 DM57_319 DM57_319 SM01058 CarD-like/TRCF domain DM57_3190 SM00382 ATPases associated with a variety of cellular activities DM57_3195 SM00763 PrkA AAA domain DM57_32 SM00822 DM57_32 DM57_3201 SM00382 ATPases associated with a variety of cellular activities DM57_341 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_341 SM00895 DM57_341 DM57_35 SM00923 MbtH-like protein DM57_352 SM00116 Domain in cystathionine beta-synthase and other proteins. DM57_352 SM01240 DM57_352 DM57_360 SM00244 prohibitin homologues DM57_365 SM00944 Pro-kumamolisin, activation domain DM57_37 SM00382 ATPases associated with a variety of cellular activities DM57_373 SM00935 Outer membrane protein (OmpH-like) DM57_375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM57_384 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM57_385 SM00363 S4 RNA-binding domain DM57_387 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM57_387 SM00292 breast cancer carboxy-terminal domain DM57_387 SM00532 Ligase N family DM57_388 SM00771 ZipA, C-terminal domain (FtsZ-binding) DM57_389 SM00968 SMC proteins Flexible Hinge Domain DM57_396 SM00155 Phospholipase D. Active site motifs. DM57_398 SM00382 ATPases associated with a variety of cellular activities DM57_400 SM00382 ATPases associated with a variety of cellular activities DM57_401 SM01005 Alanine racemase, C-terminal domain DM57_4037 SM00382 ATPases associated with a variety of cellular activities DM57_409 SM00487 DEAD-like helicases superfamily DM57_409 SM00490 helicase superfamily c-terminal domain DM57_4146 SM00342 helix_turn_helix, arabinose operon control protein DM57_419 SM00342 helix_turn_helix, arabinose operon control protein DM57_42 SM00382 ATPases associated with a variety of cellular activities DM57_427 SM00382 ATPases associated with a variety of cellular activities DM57_43 SM00823 Phosphopantetheine attachment site DM57_433 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_448 SM00861 Transketolase, pyrimidine binding domain DM57_455 SM00823 Phosphopantetheine attachment site DM57_455 SM01294 DM57_455 DM57_459 SM00823 Phosphopantetheine attachment site DM57_465 SM00869 Autotransporter beta-domain DM57_469 SM00977 TilS substrate C-terminal domain DM57_471 SM00478 endonuclease III DM57_472 SM00840 DM57_472 DM57_473 SM00028 Tetratricopeptide repeats DM57_481 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DM57_481 SM00534 ATPase domain of DNA mismatch repair MUTS family DM57_4840 SM00354 helix_turn _helix lactose operon repressor DM57_485 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DM57_486 SM00849 Metallo-beta-lactamase superfamily DM57_488 SM01130 DM57_488 DM57_493 SM00481 DNA polymerase alpha chain like domain DM57_500 SM01192 DM57_500 DM57_500 SM01193 DM57_500 DM57_504 SM00849 Metallo-beta-lactamase superfamily DM57_506 SM00382 ATPases associated with a variety of cellular activities DM57_510 SM00937 DM57_510 DM57_516 SM00271 DnaJ molecular chaperone homology domain DM57_52 SM00833 Cobalamin synthesis protein cobW C-terminal domain DM57_521 SM00226 Low molecular weight phosphatase family DM57_525 SM00346 helix_turn_helix isocitrate lyase regulation DM57_536 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DM57_536 SM00091 PAS domain DM57_536 SM00387 Histidine kinase-like ATPases DM57_536 SM00388 His Kinase A (phosphoacceptor) domain DM57_537 SM00421 helix_turn_helix, Lux Regulon DM57_537 SM00448 cheY-homologous receiver domain DM57_54 SM00382 ATPases associated with a variety of cellular activities DM57_544 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM57_548 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM57_548 SM00387 Histidine kinase-like ATPases DM57_549 SM00421 helix_turn_helix, Lux Regulon DM57_549 SM00448 cheY-homologous receiver domain DM57_552 SM00382 ATPases associated with a variety of cellular activities DM57_552 SM00448 cheY-homologous receiver domain DM57_553 SM00387 Histidine kinase-like ATPases DM57_553 SM00388 His Kinase A (phosphoacceptor) domain DM57_554 SM01230 DM57_554 DM57_555 SM00450 Rhodanese Homology Domain DM57_556 SM00852 Probable molybdopterin binding domain DM57_58 SM00495 Chitin-binding domain type 3 DM57_586 SM00382 ATPases associated with a variety of cellular activities DM57_587 SM00344 helix_turn_helix ASNC type DM57_593 SM00346 helix_turn_helix isocitrate lyase regulation DM57_598 SM00421 helix_turn_helix, Lux Regulon DM57_601 SM00631 DM57_601 DM57_607 SM00855 Phosphoglycerate mutase family DM57_611 SM00710 Parallel beta-helix repeats DM57_626 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM57_627 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM57_636 SM00829 Enoylreductase DM57_637 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_637 SM00322 K homology RNA-binding domain DM57_638 SM01387 DM57_638 DM57_641 SM00947 Carbonic anhydrase DM57_668 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM57_675 SM00448 cheY-homologous receiver domain DM57_675 SM00862 Transcriptional regulatory protein, C terminal DM57_676 SM00387 Histidine kinase-like ATPases DM57_676 SM00388 His Kinase A (phosphoacceptor) domain DM57_682 SM00829 Enoylreductase DM57_683 SM00851 MGS-like domain DM57_688 SM01209 DM57_688 DM57_688 SM01210 DM57_688 DM57_69 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_694 SM00316 Ribosomal protein S1-like RNA-binding domain DM57_7 SM00062 Bacterial periplasmic substrate-binding proteins DM57_71 SM00347 helix_turn_helix multiple antibiotic resistance protein DM57_713 SM00382 ATPases associated with a variety of cellular activities DM57_714 SM00481 DNA polymerase alpha chain like domain DM57_715 SM00450 Rhodanese Homology Domain DM57_717 SM00487 DEAD-like helicases superfamily DM57_717 SM00490 helicase superfamily c-terminal domain DM57_722 SM00382 ATPases associated with a variety of cellular activities DM57_722 SM00843 DM57_722 DM57_729 SM00478 endonuclease III DM57_735 SM00382 ATPases associated with a variety of cellular activities DM57_743 SM00986 Uracil DNA glycosylase superfamily DM57_743 SM00987 UreE urease accessory protein, C-terminal domain DM57_745 SM00387 Histidine kinase-like ATPases DM57_746 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM57_752 SM00530 Helix-turn-helix XRE-family like proteins DM57_753 SM01007 Class II Aldolase and Adducin N-terminal domain DM57_754 SM01130 DM57_754 DM57_767 SM00382 ATPases associated with a variety of cellular activities DM57_768 SM00382 ATPases associated with a variety of cellular activities DM57_785 SM00382 ATPases associated with a variety of cellular activities DM57_792 SM00563 Phosphate acyltransferases DM57_796 SM00732 Likely ribonuclease with RNase H fold. DM57_802 SM00883 Chaperonin 10 Kd subunit DM57_805 SM00829 Enoylreductase DM57_812 SM00849 Metallo-beta-lactamase superfamily DM57_813 SM00530 Helix-turn-helix XRE-family like proteins DM57_828 SM00382 ATPases associated with a variety of cellular activities DM57_83 SM00382 ATPases associated with a variety of cellular activities DM57_832 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM57_833 SM01092 CO dehydrogenase flavoprotein C-terminal domain DM57_836 SM00342 helix_turn_helix, arabinose operon control protein DM57_848 SM00849 Metallo-beta-lactamase superfamily DM57_851 SM00346 helix_turn_helix isocitrate lyase regulation DM57_879 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM57_879 SM00954 Region found in RelA / SpoT proteins DM57_880 SM01409 DM57_880 DM57_881 SM00072 Guanylate kinase homologues. DM57_885 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_90 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM57_903 SM00382 ATPases associated with a variety of cellular activities DM57_905 SM00843 DM57_905 DM57_907 SM00463 Small MutS-related domain DM57_909 SM00382 ATPases associated with a variety of cellular activities DM57_91 SM00260 Two component signalling adaptor domain DM57_916 SM00062 Bacterial periplasmic substrate-binding proteins DM57_918 SM00382 ATPases associated with a variety of cellular activities DM57_93 SM00342 helix_turn_helix, arabinose operon control protein DM57_948 SM00729 Elongator protein 3, MiaB family, Radical SAM DM57_95 SM00823 Phosphopantetheine attachment site DM57_95 SM00824 Thioesterase DM57_950 SM00650 Ribosomal RNA adenine dimethylases DM57_951 SM00450 Rhodanese Homology Domain DM57_959 SM00382 ATPases associated with a variety of cellular activities DM57_96 SM00923 MbtH-like protein DM57_964 SM00988 UreE urease accessory protein, N-terminal domain DM57_97 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DM57_980 SM00052 Putative diguanylate phosphodiesterase DM57_980 SM00267 diguanylate cyclase DM57_989 SM00434 DNA Topoisomerase IV DM57_990 SM00387 Histidine kinase-like ATPases DM57_990 SM00433 TopoisomeraseII DM57_991 SM00382 ATPases associated with a variety of cellular activities DM57_996 SM00316 Ribosomal protein S1-like RNA-binding domain