locus-tag class description BOC52_00005 PF00698 Acyl transferase domain BOC52_00030 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BOC52_00030 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BOC52_00035 PF00378 Enoyl-CoA hydratase/isomerase BOC52_00040 PF00378 Enoyl-CoA hydratase/isomerase BOC52_00045 PF00550 Phosphopantetheine attachment site BOC52_00050 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_00050 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_00070 PF12833 Helix-turn-helix domain BOC52_00075 PF10119 Predicted methyltransferase regulatory domain BOC52_00075 PF13847 Methyltransferase domain BOC52_00085 PF00199 Catalase BOC52_00085 PF06628 Catalase-related immune-responsive BOC52_00090 PF04397 LytTr DNA-binding domain BOC52_00090 PF00072 Response regulator receiver domain BOC52_00095 PF06580 Histidine kinase BOC52_00095 PF07694 5TMR of 5TMR-LYT BOC52_00140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BOC52_00145 PF00005 ABC transporter BOC52_00150 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_00155 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_00165 PF10997 Alternate to MurJ BOC52_00170 PF13609 Gram-negative porin BOC52_00175 PF07681 DoxX BOC52_00180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BOC52_00180 PF00034 Cytochrome c BOC52_00185 PF00732 GMC oxidoreductase BOC52_00185 PF05199 GMC oxidoreductase BOC52_00215 PF00082 Subtilase family BOC52_00215 PF04151 Bacterial pre-peptidase C-terminal domain BOC52_00220 PF00690 Cation transporter/ATPase, N-terminus BOC52_00220 PF00689 Cation transporting ATPase, C-terminus BOC52_00235 PF00392 Bacterial regulatory proteins, gntR family BOC52_00235 PF00155 Aminotransferase class I and II BOC52_00240 PF00384 Molybdopterin oxidoreductase BOC52_00245 PF01062 Bestrophin, RFP-TM, chloride channel BOC52_00250 PF05360 yiaA/B two helix domain BOC52_00260 PF01566 Natural resistance-associated macrophage protein BOC52_00265 PF00190 Cupin BOC52_00275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_00290 PF03797 Autotransporter beta-domain BOC52_00290 PF12951 Passenger-associated-transport-repeat BOC52_00290 PF00082 Subtilase family BOC52_00310 PF03527 RHS protein BOC52_00310 PF05593 RHS Repeat BOC52_00320 PF04717 Type VI secretion system, phage-baseplate injector BOC52_00345 PF01427 D-ala-D-ala dipeptidase BOC52_00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_00355 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_00360 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_00360 PF12911 N-terminal TM domain of oligopeptide transport permease C BOC52_00365 PF00005 ABC transporter BOC52_00365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_00370 PF00005 ABC transporter BOC52_00370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_00380 PF03466 LysR substrate binding domain BOC52_00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_00395 PF01551 Peptidase family M23 BOC52_00395 PF01476 LysM domain BOC52_00410 PF13609 Gram-negative porin BOC52_00430 PF00756 Putative esterase BOC52_00435 PF02423 Ornithine cyclodeaminase/mu-crystallin family BOC52_00455 PF00561 alpha/beta hydrolase fold BOC52_00460 PF07885 Ion channel BOC52_00460 PF02254 TrkA-N domain BOC52_00480 PF02203 Tar ligand binding domain homologue BOC52_00480 PF00672 HAMP domain BOC52_00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_00485 PF07690 Major Facilitator Superfamily BOC52_00505 PF09084 NMT1/THI5 like BOC52_00510 PF07947 YhhN family BOC52_00515 PF00743 Flavin-binding monooxygenase-like BOC52_00520 PF00106 short chain dehydrogenase BOC52_00530 PF00561 alpha/beta hydrolase fold BOC52_00540 PF07690 Major Facilitator Superfamily BOC52_00550 PF03466 LysR substrate binding domain BOC52_00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_00555 PF13333 Integrase core domain BOC52_00555 PF00665 Integrase core domain BOC52_00555 PF13276 HTH-like domain BOC52_00560 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_00600 PF01053 Cys/Met metabolism PLP-dependent enzyme BOC52_00610 PF01037 Lrp/AsnC ligand binding domain BOC52_00620 PF01425 Amidase BOC52_00640 PF00691 OmpA family BOC52_00640 PF01389 OmpA-like transmembrane domain BOC52_00645 PF13018 Extended Signal Peptide of Type V secretion system BOC52_00645 PF03895 YadA-like membrane anchor domain BOC52_00645 PF05658 Head domain of trimeric autotransporter adhesin BOC52_00645 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_00655 PF00083 Sugar (and other) transporter BOC52_00660 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_00660 PF14759 Reductase C-terminal BOC52_00675 PF03447 Homoserine dehydrogenase, NAD binding domain BOC52_00675 PF01958 Domain of unknown function DUF108 BOC52_00680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_00680 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_00680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_00690 PF09339 IclR helix-turn-helix domain BOC52_00690 PF01614 Bacterial transcriptional regulator BOC52_00695 PF12697 Alpha/beta hydrolase family BOC52_00710 PF00355 Rieske [2Fe-2S] domain BOC52_00720 PF00355 Rieske [2Fe-2S] domain BOC52_00730 PF13609 Gram-negative porin BOC52_00735 PF09339 IclR helix-turn-helix domain BOC52_00735 PF01614 Bacterial transcriptional regulator BOC52_00745 PF00881 Nitroreductase family BOC52_00750 PF00149 Calcineurin-like phosphoesterase BOC52_00760 PF02308 MgtC family BOC52_00765 PF00196 Bacterial regulatory proteins, luxR family BOC52_00765 PF03472 Autoinducer binding domain BOC52_00780 PF00765 Autoinducer synthase BOC52_00790 PF00925 GTP cyclohydrolase II BOC52_00795 PF00571 CBS domain BOC52_00795 PF00478 IMP dehydrogenase / GMP reductase domain BOC52_00820 PF13609 Gram-negative porin BOC52_00845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_00850 PF00583 Acetyltransferase (GNAT) family BOC52_00865 PF13609 Gram-negative porin BOC52_00880 PF13520 Amino acid permease BOC52_00885 PF00202 Aminotransferase class-III BOC52_00890 PF00171 Aldehyde dehydrogenase family BOC52_00895 PF00196 Bacterial regulatory proteins, luxR family BOC52_00910 PF17409 MoaF C-terminal domain BOC52_00910 PF10703 MoaF N-terminal domain BOC52_00925 PF03466 LysR substrate binding domain BOC52_00925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_00935 PF03466 LysR substrate binding domain BOC52_00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_00945 PF01546 Peptidase family M20/M25/M40 BOC52_00945 PF07687 Peptidase dimerisation domain BOC52_00965 PF18081 Fanconi anemia-associated nuclease SAP domain BOC52_00965 PF08774 VRR-NUC domain BOC52_00980 PF00294 pfkB family carbohydrate kinase BOC52_00985 PF01156 Inosine-uridine preferring nucleoside hydrolase BOC52_00995 PF00296 Luciferase-like monooxygenase BOC52_01035 PF00816 H-NS histone family BOC52_01050 PF00324 Amino acid permease BOC52_01070 PF00106 short chain dehydrogenase BOC52_01100 PF13823 Alcohol dehydrogenase GroES-associated BOC52_01100 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_01100 PF00107 Zinc-binding dehydrogenase BOC52_01110 PF00582 Universal stress protein family BOC52_01120 PF00582 Universal stress protein family BOC52_01130 PF00072 Response regulator receiver domain BOC52_01130 PF00196 Bacterial regulatory proteins, luxR family BOC52_01170 PF01494 FAD binding domain BOC52_01185 PF08453 Peptidase family M9 N-terminal BOC52_01185 PF01752 Collagenase BOC52_01205 PF00398 Ribosomal RNA adenine dimethylase BOC52_01210 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_01230 PF13603 Leucyl-tRNA synthetase, Domain 2 BOC52_01230 PF08264 Anticodon-binding domain of tRNA BOC52_01230 PF00133 tRNA synthetases class I (I, L, M and V) BOC52_01265 PF00207 Alpha-2-macroglobulin family BOC52_01265 PF07703 Alpha-2-macroglobulin bait region domain BOC52_01265 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BOC52_01265 PF01835 MG2 domain BOC52_01270 PF00905 Penicillin binding protein transpeptidase domain BOC52_01270 PF00912 Transglycosylase BOC52_01280 PF01339 CheB methylesterase BOC52_01280 PF00072 Response regulator receiver domain BOC52_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_01285 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_01285 PF00512 His Kinase A (phospho-acceptor) domain BOC52_01335 PF00155 Aminotransferase class I and II BOC52_01340 PF00324 Amino acid permease BOC52_01345 PF01037 Lrp/AsnC ligand binding domain BOC52_01355 PF00563 EAL domain BOC52_01355 PF00990 Diguanylate cyclase, GGDEF domain BOC52_01355 PF03707 Bacterial signalling protein N terminal repeat BOC52_01370 PF03006 Haemolysin-III related BOC52_01380 PF13458 Periplasmic binding protein BOC52_01410 PF09339 IclR helix-turn-helix domain BOC52_01410 PF01614 Bacterial transcriptional regulator BOC52_01415 PF00816 H-NS histone family BOC52_01425 PF13018 Extended Signal Peptide of Type V secretion system BOC52_01425 PF03895 YadA-like membrane anchor domain BOC52_01425 PF05658 Head domain of trimeric autotransporter adhesin BOC52_01425 PF13018 Extended Signal Peptide of Type V secretion system BOC52_01425 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_01425 PF05658 Head domain of trimeric autotransporter adhesin BOC52_01425 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_01425 PF03895 YadA-like membrane anchor domain BOC52_01455 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_01475 PF08666 SAF domain BOC52_01475 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BOC52_01485 PF02653 Branched-chain amino acid transport system / permease component BOC52_01490 PF00005 ABC transporter BOC52_01505 PF07519 Tannase and feruloyl esterase BOC52_01510 PF13609 Gram-negative porin BOC52_01520 PF07690 Major Facilitator Superfamily BOC52_01525 PF00501 AMP-binding enzyme BOC52_01525 PF07993 Male sterility protein BOC52_01525 PF00550 Phosphopantetheine attachment site BOC52_01530 PF00171 Aldehyde dehydrogenase family BOC52_01535 PF00378 Enoyl-CoA hydratase/isomerase BOC52_01580 PF08450 SMP-30/Gluconolactonase/LRE-like region BOC52_01600 PF01047 MarR family BOC52_01630 PF00196 Bacterial regulatory proteins, luxR family BOC52_01630 PF00072 Response regulator receiver domain BOC52_01650 PF05506 Domain of unknown function (DUF756) BOC52_01650 PF04185 Phosphoesterase family BOC52_01655 PF03150 Di-haem cytochrome c peroxidase BOC52_01655 PF14376 Haem-binding domain BOC52_01655 PF00034 Cytochrome c BOC52_01665 PF00654 Voltage gated chloride channel BOC52_01680 PF00106 short chain dehydrogenase BOC52_01695 PF07690 Major Facilitator Superfamily BOC52_01700 PF07969 Amidohydrolase family BOC52_01705 PF13556 PucR C-terminal helix-turn-helix domain BOC52_01705 PF17853 GGDEF-like domain BOC52_01710 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BOC52_01725 PF13609 Gram-negative porin BOC52_01750 PF03466 LysR substrate binding domain BOC52_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_01755 PF04632 Fusaric acid resistance protein family BOC52_01770 PF03576 Peptidase family S58 BOC52_01795 PF13609 Gram-negative porin BOC52_01825 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_01840 PF00248 Aldo/keto reductase family BOC52_01845 PF08666 SAF domain BOC52_01845 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BOC52_01860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BOC52_01860 PF13378 Enolase C-terminal domain-like BOC52_01865 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_01870 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_01880 PF03459 TOBE domain BOC52_01880 PF00005 ABC transporter BOC52_01880 PF17912 MalK OB fold domain BOC52_01885 PF01614 Bacterial transcriptional regulator BOC52_01885 PF09339 IclR helix-turn-helix domain BOC52_01890 PF07690 Major Facilitator Superfamily BOC52_01905 PF03466 LysR substrate binding domain BOC52_01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_01910 PF07690 Major Facilitator Superfamily BOC52_01930 PF03466 LysR substrate binding domain BOC52_01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_01950 PF01734 Patatin-like phospholipase BOC52_01960 PF00106 short chain dehydrogenase BOC52_01965 PF00155 Aminotransferase class I and II BOC52_01975 PF13458 Periplasmic binding protein BOC52_01985 PF00970 Oxidoreductase FAD-binding domain BOC52_01985 PF00175 Oxidoreductase NAD-binding domain BOC52_01985 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_02010 PF02515 CoA-transferase family III BOC52_02015 PF14535 AMP-binding enzyme C-terminal domain BOC52_02015 PF00501 AMP-binding enzyme BOC52_02020 PF02803 Thiolase, C-terminal domain BOC52_02020 PF00108 Thiolase, N-terminal domain BOC52_02030 PF00378 Enoyl-CoA hydratase/isomerase BOC52_02040 PF00440 Bacterial regulatory proteins, tetR family BOC52_02045 PF13609 Gram-negative porin BOC52_02065 PF09339 IclR helix-turn-helix domain BOC52_02065 PF01614 Bacterial transcriptional regulator BOC52_02075 PF01527 Transposase BOC52_02090 PF00171 Aldehyde dehydrogenase family BOC52_02100 PF00202 Aminotransferase class-III BOC52_02105 PF03466 LysR substrate binding domain BOC52_02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_02175 PF07238 PilZ domain BOC52_02175 PF03552 Cellulose synthase BOC52_02175 PF00535 Glycosyl transferase family 2 BOC52_02180 PF02321 Outer membrane efflux protein BOC52_02185 PF00672 HAMP domain BOC52_02185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_02185 PF02203 Tar ligand binding domain homologue BOC52_02200 PF00501 AMP-binding enzyme BOC52_02200 PF13193 AMP-binding enzyme C-terminal domain BOC52_02205 PF13545 Crp-like helix-turn-helix domain BOC52_02205 PF00027 Cyclic nucleotide-binding domain BOC52_02215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_02215 PF00512 His Kinase A (phospho-acceptor) domain BOC52_02230 PF00155 Aminotransferase class I and II BOC52_02230 PF00392 Bacterial regulatory proteins, gntR family BOC52_02240 PF00106 short chain dehydrogenase BOC52_02255 PF01594 AI-2E family transporter BOC52_02290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_02310 PF00440 Bacterial regulatory proteins, tetR family BOC52_02310 PF16925 Tetracyclin repressor-like, C-terminal domain BOC52_02350 PF10017 Histidine-specific methyltransferase, SAM-dependent BOC52_02355 PF12867 DinB superfamily BOC52_02355 PF03781 Sulfatase-modifying factor enzyme 1 BOC52_02370 PF00842 Alanine racemase, C-terminal domain BOC52_02370 PF01168 Alanine racemase, N-terminal domain BOC52_02380 PF00378 Enoyl-CoA hydratase/isomerase BOC52_02395 PF13609 Gram-negative porin BOC52_02410 PF03476 MOSC N-terminal beta barrel domain BOC52_02410 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_02410 PF03473 MOSC domain BOC52_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_02415 PF08521 Two-component sensor kinase N-terminal BOC52_02415 PF00512 His Kinase A (phospho-acceptor) domain BOC52_02420 PF00486 Transcriptional regulatory protein, C terminal BOC52_02420 PF00072 Response regulator receiver domain BOC52_02455 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_02460 PF00005 ABC transporter BOC52_02460 PF08402 TOBE domain BOC52_02465 PF13609 Gram-negative porin BOC52_02475 PF02311 AraC-like ligand binding domain BOC52_02475 PF12833 Helix-turn-helix domain BOC52_02480 PF03328 HpcH/HpaI aldolase/citrate lyase family BOC52_02485 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_02495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BOC52_02500 PF00171 Aldehyde dehydrogenase family BOC52_02505 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_02510 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_02515 PF01047 MarR family BOC52_02530 PF00072 Response regulator receiver domain BOC52_02530 PF00486 Transcriptional regulatory protein, C terminal BOC52_02535 PF00672 HAMP domain BOC52_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_02535 PF00512 His Kinase A (phospho-acceptor) domain BOC52_02540 PF00296 Luciferase-like monooxygenase BOC52_02545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_02545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BOC52_02550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BOC52_02550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_02585 PF12833 Helix-turn-helix domain BOC52_02585 PF06719 AraC-type transcriptional regulator N-terminus BOC52_02590 PF01799 [2Fe-2S] binding domain BOC52_02590 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_02595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BOC52_02610 PF00072 Response regulator receiver domain BOC52_02610 PF00486 Transcriptional regulatory protein, C terminal BOC52_02615 PF13537 Glutamine amidotransferase domain BOC52_02615 PF00733 Asparagine synthase BOC52_02645 PF00510 Cytochrome c oxidase subunit III BOC52_02660 PF01204 Trehalase BOC52_02670 PF07690 Major Facilitator Superfamily BOC52_02675 PF13542 Helix-turn-helix domain of transposase family ISL3 BOC52_02675 PF01610 Transposase BOC52_02675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BOC52_02680 PF06224 Winged helix DNA-binding domain BOC52_02695 PF08453 Peptidase family M9 N-terminal BOC52_02695 PF01752 Collagenase BOC52_02705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_02720 PF13018 Extended Signal Peptide of Type V secretion system BOC52_02720 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_02720 PF05658 Head domain of trimeric autotransporter adhesin BOC52_02720 PF03895 YadA-like membrane anchor domain BOC52_02795 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BOC52_02795 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BOC52_02845 PF01965 DJ-1/PfpI family BOC52_02850 PF00581 Rhodanese-like domain BOC52_02875 PF00072 Response regulator receiver domain BOC52_02875 PF00486 Transcriptional regulatory protein, C terminal BOC52_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_02880 PF00512 His Kinase A (phospho-acceptor) domain BOC52_02905 PF18029 Glyoxalase-like domain BOC52_02940 PF00034 Cytochrome c BOC52_02955 PF01734 Patatin-like phospholipase BOC52_02960 PF00672 HAMP domain BOC52_02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_02960 PF00512 His Kinase A (phospho-acceptor) domain BOC52_02965 PF00486 Transcriptional regulatory protein, C terminal BOC52_02965 PF00072 Response regulator receiver domain BOC52_02975 PF04960 Glutaminase BOC52_02995 PF00296 Luciferase-like monooxygenase BOC52_03005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_03010 PF02687 FtsX-like permease family BOC52_03010 PF00005 ABC transporter BOC52_03010 PF12704 MacB-like periplasmic core domain BOC52_03015 PF02321 Outer membrane efflux protein BOC52_03025 PF00378 Enoyl-CoA hydratase/isomerase BOC52_03030 PF00378 Enoyl-CoA hydratase/isomerase BOC52_03035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BOC52_03035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_03040 PF00171 Aldehyde dehydrogenase family BOC52_03045 PF13193 AMP-binding enzyme C-terminal domain BOC52_03045 PF00501 AMP-binding enzyme BOC52_03050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_03050 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_03050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_03055 PF12833 Helix-turn-helix domain BOC52_03055 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BOC52_03065 PF01145 SPFH domain / Band 7 family BOC52_03080 PF00106 short chain dehydrogenase BOC52_03080 PF00561 alpha/beta hydrolase fold BOC52_03100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_03100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_03110 PF00171 Aldehyde dehydrogenase family BOC52_03115 PF03466 LysR substrate binding domain BOC52_03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_03155 PF00860 Permease family BOC52_03190 PF01590 GAF domain BOC52_03190 PF00158 Sigma-54 interaction domain BOC52_03190 PF02954 Bacterial regulatory protein, Fis family BOC52_03215 PF03929 PepSY-associated TM region BOC52_03225 PF07715 TonB-dependent Receptor Plug Domain BOC52_03225 PF00593 TonB dependent receptor BOC52_03230 PF00005 ABC transporter BOC52_03230 PF00664 ABC transporter transmembrane region BOC52_03235 PF04954 Siderophore-interacting protein BOC52_03235 PF08021 Siderophore-interacting FAD-binding domain BOC52_03235 PF00664 ABC transporter transmembrane region BOC52_03235 PF00005 ABC transporter BOC52_03245 PF00668 Condensation domain BOC52_03245 PF08242 Methyltransferase domain BOC52_03245 PF00550 Phosphopantetheine attachment site BOC52_03245 PF00501 AMP-binding enzyme BOC52_03250 PF00550 Phosphopantetheine attachment site BOC52_03250 PF08242 Methyltransferase domain BOC52_03250 PF00501 AMP-binding enzyme BOC52_03250 PF00668 Condensation domain BOC52_03255 PF12833 Helix-turn-helix domain BOC52_03260 PF13193 AMP-binding enzyme C-terminal domain BOC52_03260 PF00501 AMP-binding enzyme BOC52_03265 PF00975 Thioesterase domain BOC52_03270 PF01817 Chorismate mutase type II BOC52_03275 PF00425 chorismate binding enzyme BOC52_03295 PF00005 ABC transporter BOC52_03300 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_03300 PF00005 ABC transporter BOC52_03305 PF11862 Domain of unknown function (DUF3382) BOC52_03305 PF02653 Branched-chain amino acid transport system / permease component BOC52_03310 PF02653 Branched-chain amino acid transport system / permease component BOC52_03315 PF13458 Periplasmic binding protein BOC52_03320 PF01266 FAD dependent oxidoreductase BOC52_03335 PF00106 short chain dehydrogenase BOC52_03350 PF07859 alpha/beta hydrolase fold BOC52_03360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BOC52_03360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BOC52_03365 PF05853 beta-keto acid cleavage enzyme BOC52_03370 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BOC52_03375 PF12833 Helix-turn-helix domain BOC52_03375 PF01965 DJ-1/PfpI family BOC52_03380 PF07504 Fungalysin/Thermolysin Propeptide Motif BOC52_03380 PF03413 Peptidase propeptide and YPEB domain BOC52_03380 PF02868 Thermolysin metallopeptidase, alpha-helical domain BOC52_03380 PF01447 Thermolysin metallopeptidase, catalytic domain BOC52_03385 PF04389 Peptidase family M28 BOC52_03385 PF04151 Bacterial pre-peptidase C-terminal domain BOC52_03390 PF00267 Gram-negative porin BOC52_03400 PF12411 Choline sulfatase enzyme C terminal BOC52_03400 PF00884 Sulfatase BOC52_03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_03405 PF03466 LysR substrate binding domain BOC52_03410 PF00551 Formyl transferase BOC52_03420 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BOC52_03425 PF00175 Oxidoreductase NAD-binding domain BOC52_03425 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_03425 PF00970 Oxidoreductase FAD-binding domain BOC52_03430 PF00355 Rieske [2Fe-2S] domain BOC52_03430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BOC52_03440 PF00766 Electron transfer flavoprotein FAD-binding domain BOC52_03440 PF01012 Electron transfer flavoprotein domain BOC52_03445 PF13183 4Fe-4S dicluster domain BOC52_03445 PF02754 Cysteine-rich domain BOC52_03450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_03460 PF01244 Membrane dipeptidase (Peptidase family M19) BOC52_03465 PF00464 Serine hydroxymethyltransferase BOC52_03475 PF01965 DJ-1/PfpI family BOC52_03475 PF12833 Helix-turn-helix domain BOC52_03480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BOC52_03480 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_03485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BOC52_03485 PF00356 Bacterial regulatory proteins, lacI family BOC52_03490 PF02435 Levansucrase/Invertase BOC52_03495 PF08244 Glycosyl hydrolases family 32 C terminal BOC52_03495 PF00251 Glycosyl hydrolases family 32 N-terminal domain BOC52_03505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_03505 PF00529 HlyD membrane-fusion protein of T1SS BOC52_03515 PF02321 Outer membrane efflux protein BOC52_03520 PF00535 Glycosyl transferase family 2 BOC52_03525 PF07690 Major Facilitator Superfamily BOC52_03530 PF03033 Glycosyltransferase family 28 N-terminal domain BOC52_03540 PF00561 alpha/beta hydrolase fold BOC52_03600 PF04717 Type VI secretion system, phage-baseplate injector BOC52_03605 PF04717 Type VI secretion system, phage-baseplate injector BOC52_03610 PF07724 AAA domain (Cdc48 subfamily) BOC52_03610 PF17871 AAA lid domain BOC52_03610 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_03610 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_03655 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BOC52_03655 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BOC52_03685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_03685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_03690 PF00266 Aminotransferase class-V BOC52_03695 PF01965 DJ-1/PfpI family BOC52_03700 PF01965 DJ-1/PfpI family BOC52_03700 PF12833 Helix-turn-helix domain BOC52_03705 PF04632 Fusaric acid resistance protein family BOC52_03715 PF07690 Major Facilitator Superfamily BOC52_03720 PF00155 Aminotransferase class I and II BOC52_03720 PF00392 Bacterial regulatory proteins, gntR family BOC52_03725 PF08379 Bacterial transglutaminase-like N-terminal region BOC52_03725 PF01841 Transglutaminase-like superfamily BOC52_03730 PF04168 A predicted alpha-helical domain with a conserved ER motif. BOC52_03730 PF14403 Circularly permuted ATP-grasp type 2 BOC52_03755 PF14403 Circularly permuted ATP-grasp type 2 BOC52_03765 PF00881 Nitroreductase family BOC52_03785 PF10417 C-terminal domain of 1-Cys peroxiredoxin BOC52_03785 PF00578 AhpC/TSA family BOC52_03790 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_03790 PF13192 Thioredoxin domain BOC52_03830 PF00501 AMP-binding enzyme BOC52_03840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BOC52_03840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BOC52_03845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BOC52_03845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BOC52_03850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BOC52_03850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BOC52_03855 PF13193 AMP-binding enzyme C-terminal domain BOC52_03855 PF00501 AMP-binding enzyme BOC52_03870 PF00317 Ribonucleotide reductase, all-alpha domain BOC52_03870 PF02867 Ribonucleotide reductase, barrel domain BOC52_03870 PF03477 ATP cone domain BOC52_03880 PF00118 TCP-1/cpn60 chaperonin family BOC52_03885 PF00166 Chaperonin 10 Kd subunit BOC52_03895 PF00491 Arginase family BOC52_03900 PF00171 Aldehyde dehydrogenase family BOC52_03905 PF01381 Helix-turn-helix BOC52_03905 PF07883 Cupin domain BOC52_03920 PF07722 Peptidase C26 BOC52_03925 PF00120 Glutamine synthetase, catalytic domain BOC52_03930 PF00202 Aminotransferase class-III BOC52_03935 PF13416 Bacterial extracellular solute-binding protein BOC52_03945 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_03950 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_03960 PF01266 FAD dependent oxidoreductase BOC52_03965 PF01266 FAD dependent oxidoreductase BOC52_03970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_03970 PF02203 Tar ligand binding domain homologue BOC52_03970 PF00672 HAMP domain BOC52_04010 PF02811 PHP domain BOC52_04010 PF14716 Helix-hairpin-helix domain BOC52_04010 PF14791 DNA polymerase beta thumb BOC52_04030 PF00768 D-alanyl-D-alanine carboxypeptidase BOC52_04045 PF00392 Bacterial regulatory proteins, gntR family BOC52_04045 PF00155 Aminotransferase class I and II BOC52_04055 PF01613 Flavin reductase like domain BOC52_04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_04070 PF03466 LysR substrate binding domain BOC52_04075 PF00561 alpha/beta hydrolase fold BOC52_04100 PF07969 Amidohydrolase family BOC52_04110 PF00857 Isochorismatase family BOC52_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_04115 PF03466 LysR substrate binding domain BOC52_04125 PF07690 Major Facilitator Superfamily BOC52_04135 PF12833 Helix-turn-helix domain BOC52_04150 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_04165 PF17954 Quercetinase C-terminal cupin domain BOC52_04165 PF02678 Pirin BOC52_04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_04170 PF03466 LysR substrate binding domain BOC52_04225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BOC52_04230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BOC52_04235 PF16363 GDP-mannose 4,6 dehydratase BOC52_04240 PF00483 Nucleotidyl transferase BOC52_04250 PF02563 Polysaccharide biosynthesis/export protein BOC52_04250 PF10531 SLBB domain BOC52_04280 PF06082 Exopolysaccharide biosynthesis protein YbjH BOC52_04285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_04285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_04285 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_04330 PF03009 Glycerophosphoryl diester phosphodiesterase family BOC52_04335 PF03150 Di-haem cytochrome c peroxidase BOC52_04335 PF00034 Cytochrome c BOC52_04350 PF01527 Transposase BOC52_04360 PF13356 Arm DNA-binding domain BOC52_04360 PF00589 Phage integrase family BOC52_04370 PF05717 IS66 Orf2 like protein BOC52_04375 PF13007 Transposase C of IS166 homeodomain BOC52_04375 PF03050 Transposase IS66 family BOC52_04375 PF13005 zinc-finger binding domain of transposase IS66 BOC52_04375 PF13817 IS66 C-terminal element BOC52_04380 PF07929 Plasmid pRiA4b ORF-3-like protein BOC52_04425 PF00474 Sodium:solute symporter family BOC52_04435 PF00501 AMP-binding enzyme BOC52_04435 PF13193 AMP-binding enzyme C-terminal domain BOC52_04435 PF16177 Acetyl-coenzyme A synthetase N-terminus BOC52_04445 PF03350 Uncharacterized protein family, UPF0114 BOC52_04455 PF00210 Ferritin-like domain BOC52_04460 PF01177 Asp/Glu/Hydantoin racemase BOC52_04475 PF01618 MotA/TolQ/ExbB proton channel family BOC52_04480 PF02472 Biopolymer transport protein ExbD/TolR BOC52_04490 PF03466 LysR substrate binding domain BOC52_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_04495 PF05726 Pirin C-terminal cupin domain BOC52_04495 PF02678 Pirin BOC52_04505 PF10636 Hemin uptake protein hemP BOC52_04510 PF03928 Haem-degrading BOC52_04515 PF04205 FMN-binding domain BOC52_04515 PF12801 4Fe-4S binding domain BOC52_04520 PF03239 Iron permease FTR1 family BOC52_04525 PF13473 Cupredoxin-like domain BOC52_04530 PF10634 Fe2+ transport protein BOC52_04535 PF17757 UvrB interaction domain BOC52_04535 PF00271 Helicase conserved C-terminal domain BOC52_04535 PF12344 Ultra-violet resistance protein B BOC52_04535 PF02151 UvrB/uvrC motif BOC52_04535 PF04851 Type III restriction enzyme, res subunit BOC52_04540 PF00155 Aminotransferase class I and II BOC52_04555 PF00248 Aldo/keto reductase family BOC52_04560 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BOC52_04575 PF00376 MerR family regulatory protein BOC52_04575 PF09278 MerR, DNA binding BOC52_04615 PF01966 HD domain BOC52_04620 PF00171 Aldehyde dehydrogenase family BOC52_04625 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase BOC52_04630 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_04635 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_04640 PF08402 TOBE domain BOC52_04640 PF00005 ABC transporter BOC52_04650 PF00266 Aminotransferase class-V BOC52_04655 PF07690 Major Facilitator Superfamily BOC52_04660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BOC52_04660 PF08501 Shikimate dehydrogenase substrate binding domain BOC52_04665 PF01220 Dehydroquinase class II BOC52_04695 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_04695 PF04324 BFD-like [2Fe-2S] binding domain BOC52_04705 PF01266 FAD dependent oxidoreductase BOC52_04710 PF05544 Proline racemase BOC52_04720 PF00701 Dihydrodipicolinate synthetase family BOC52_04730 PF13520 Amino acid permease BOC52_04735 PF00171 Aldehyde dehydrogenase family BOC52_04740 PF02615 Malate/L-lactate dehydrogenase BOC52_04750 PF07690 Major Facilitator Superfamily BOC52_04755 PF07690 Major Facilitator Superfamily BOC52_04765 PF07681 DoxX BOC52_04775 PF02652 L-lactate permease BOC52_04780 PF02589 LUD domain BOC52_04785 PF11870 Domain of unknown function (DUF3390) BOC52_04785 PF13183 4Fe-4S dicluster domain BOC52_04785 PF02589 LUD domain BOC52_04790 PF02754 Cysteine-rich domain BOC52_04795 PF00392 Bacterial regulatory proteins, gntR family BOC52_04795 PF07729 FCD domain BOC52_04810 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BOC52_04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_04820 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_04825 PF00005 ABC transporter BOC52_04825 PF09383 NIL domain BOC52_04830 PF00296 Luciferase-like monooxygenase BOC52_04835 PF03180 NLPA lipoprotein BOC52_04840 PF00196 Bacterial regulatory proteins, luxR family BOC52_04840 PF03472 Autoinducer binding domain BOC52_04880 PF00202 Aminotransferase class-III BOC52_04885 PF00171 Aldehyde dehydrogenase family BOC52_04895 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BOC52_04895 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BOC52_04905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BOC52_04905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BOC52_04910 PF00501 AMP-binding enzyme BOC52_04910 PF13193 AMP-binding enzyme C-terminal domain BOC52_04920 PF00698 Acyl transferase domain BOC52_04925 PF00501 AMP-binding enzyme BOC52_04955 PF00375 Sodium:dicarboxylate symporter family BOC52_04960 PF02321 Outer membrane efflux protein BOC52_04965 PF00873 AcrB/AcrD/AcrF family BOC52_04970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_04970 PF00529 HlyD membrane-fusion protein of T1SS BOC52_04975 PF07859 alpha/beta hydrolase fold BOC52_04980 PF03466 LysR substrate binding domain BOC52_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05015 PF00586 AIR synthase related protein, N-terminal domain BOC52_05015 PF02769 AIR synthase related protein, C-terminal domain BOC52_05050 PF01614 Bacterial transcriptional regulator BOC52_05050 PF09339 IclR helix-turn-helix domain BOC52_05055 PF03606 C4-dicarboxylate anaerobic carrier BOC52_05060 PF00392 Bacterial regulatory proteins, gntR family BOC52_05060 PF00155 Aminotransferase class I and II BOC52_05065 PF00202 Aminotransferase class-III BOC52_05070 PF00171 Aldehyde dehydrogenase family BOC52_05085 PF00355 Rieske [2Fe-2S] domain BOC52_05090 PF00355 Rieske [2Fe-2S] domain BOC52_05100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_05100 PF08447 PAS fold BOC52_05115 PF02803 Thiolase, C-terminal domain BOC52_05115 PF00108 Thiolase, N-terminal domain BOC52_05125 PF09339 IclR helix-turn-helix domain BOC52_05125 PF01614 Bacterial transcriptional regulator BOC52_05130 PF08362 YcdC-like protein, C-terminal region BOC52_05130 PF00440 Bacterial regulatory proteins, tetR family BOC52_05140 PF07690 Major Facilitator Superfamily BOC52_05150 PF07687 Peptidase dimerisation domain BOC52_05150 PF01546 Peptidase family M20/M25/M40 BOC52_05155 PF03466 LysR substrate binding domain BOC52_05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05160 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_05185 PF03180 NLPA lipoprotein BOC52_05190 PF13609 Gram-negative porin BOC52_05210 PF00583 Acetyltransferase (GNAT) family BOC52_05215 PF02734 DAK2 domain BOC52_05220 PF02733 Dak1 domain BOC52_05225 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_05225 PF00107 Zinc-binding dehydrogenase BOC52_05235 PF13407 Periplasmic binding protein domain BOC52_05240 PF02653 Branched-chain amino acid transport system / permease component BOC52_05245 PF00005 ABC transporter BOC52_05250 PF02502 Ribose/Galactose Isomerase BOC52_05260 PF13609 Gram-negative porin BOC52_05280 PF08402 TOBE domain BOC52_05280 PF00005 ABC transporter BOC52_05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05290 PF03466 LysR substrate binding domain BOC52_05300 PF00593 TonB dependent receptor BOC52_05300 PF04886 PT repeat BOC52_05300 PF07715 TonB-dependent Receptor Plug Domain BOC52_05305 PF05171 Haemin-degrading HemS.ChuX domain BOC52_05310 PF01497 Periplasmic binding protein BOC52_05320 PF01032 FecCD transport family BOC52_05335 PF00005 ABC transporter BOC52_05340 PF03458 UPF0126 domain BOC52_05345 PF00905 Penicillin binding protein transpeptidase domain BOC52_05345 PF00912 Transglycosylase BOC52_05345 PF17092 Penicillin-binding protein OB-like domain BOC52_05350 PF03466 LysR substrate binding domain BOC52_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05355 PF01212 Beta-eliminating lyase BOC52_05365 PF01654 Cytochrome bd terminal oxidase subunit I BOC52_05370 PF02322 Cytochrome bd terminal oxidase subunit II BOC52_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05385 PF03466 LysR substrate binding domain BOC52_05400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BOC52_05460 PF00403 Heavy-metal-associated domain BOC52_05485 PF02308 MgtC family BOC52_05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05495 PF03466 LysR substrate binding domain BOC52_05500 PF07690 Major Facilitator Superfamily BOC52_05510 PF02203 Tar ligand binding domain homologue BOC52_05510 PF00672 HAMP domain BOC52_05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_05515 PF04055 Radical SAM superfamily BOC52_05515 PF13186 Iron-sulfur cluster-binding domain BOC52_05550 PF04303 PrpF protein BOC52_05555 PF00330 Aconitase family (aconitate hydratase) BOC52_05555 PF00694 Aconitase C-terminal domain BOC52_05560 PF00285 Citrate synthase, C-terminal domain BOC52_05570 PF02954 Bacterial regulatory protein, Fis family BOC52_05570 PF00158 Sigma-54 interaction domain BOC52_05570 PF06506 Propionate catabolism activator BOC52_05580 PF00672 HAMP domain BOC52_05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_05580 PF02203 Tar ligand binding domain homologue BOC52_05605 PF00561 alpha/beta hydrolase fold BOC52_05615 PF01804 Penicillin amidase BOC52_05630 PF03466 LysR substrate binding domain BOC52_05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05640 PF03746 LamB/YcsF family BOC52_05645 PF00364 Biotin-requiring enzyme BOC52_05650 PF02785 Biotin carboxylase C-terminal domain BOC52_05650 PF00289 Biotin carboxylase, N-terminal domain BOC52_05650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BOC52_05660 PF02626 Carboxyltransferase domain, subdomain A and B BOC52_05695 PF01053 Cys/Met metabolism PLP-dependent enzyme BOC52_05705 PF02525 Flavodoxin-like fold BOC52_05710 PF03466 LysR substrate binding domain BOC52_05710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05750 PF04717 Type VI secretion system, phage-baseplate injector BOC52_05790 PF17871 AAA lid domain BOC52_05790 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_05790 PF07724 AAA domain (Cdc48 subfamily) BOC52_05790 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_05820 PF13488 Glycine zipper BOC52_05820 PF00691 OmpA family BOC52_05840 PF03466 LysR substrate binding domain BOC52_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05850 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_05850 PF00107 Zinc-binding dehydrogenase BOC52_05855 PF00733 Asparagine synthase BOC52_05855 PF13537 Glutamine amidotransferase domain BOC52_05860 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BOC52_05860 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BOC52_05880 PF17678 Glycosyl hydrolase family 92 N-terminal domain BOC52_05880 PF07971 Glycosyl hydrolase family 92 BOC52_05900 PF00106 short chain dehydrogenase BOC52_05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05910 PF03466 LysR substrate binding domain BOC52_05915 PF01266 FAD dependent oxidoreductase BOC52_05920 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_05945 PF03466 LysR substrate binding domain BOC52_05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_05955 PF07687 Peptidase dimerisation domain BOC52_05955 PF01546 Peptidase family M20/M25/M40 BOC52_05960 PF00083 Sugar (and other) transporter BOC52_05960 PF08946 Osmosensory transporter coiled coil BOC52_05970 PF03880 DbpA RNA binding domain BOC52_05970 PF00270 DEAD/DEAH box helicase BOC52_05970 PF00271 Helicase conserved C-terminal domain BOC52_05980 PF00723 Glycosyl hydrolases family 15 BOC52_05980 PF09137 Glucodextranase, domain N BOC52_05995 PF00480 ROK family BOC52_05995 PF01047 MarR family BOC52_06000 PF00005 ABC transporter BOC52_06005 PF02653 Branched-chain amino acid transport system / permease component BOC52_06010 PF13407 Periplasmic binding protein domain BOC52_06015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BOC52_06015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_06055 PF00360 Phytochrome region BOC52_06055 PF00563 EAL domain BOC52_06055 PF01590 GAF domain BOC52_06055 PF00990 Diguanylate cyclase, GGDEF domain BOC52_06065 PF03466 LysR substrate binding domain BOC52_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_06070 PF00891 O-methyltransferase domain BOC52_06090 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_06090 PF13193 AMP-binding enzyme C-terminal domain BOC52_06090 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_06090 PF00668 Condensation domain BOC52_06090 PF00550 Phosphopantetheine attachment site BOC52_06090 PF14765 Polyketide synthase dehydratase BOC52_06090 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_06090 PF00501 AMP-binding enzyme BOC52_06090 PF08659 KR domain BOC52_06100 PF13556 PucR C-terminal helix-turn-helix domain BOC52_06100 PF05651 Putative sugar diacid recognition BOC52_06100 PF17853 GGDEF-like domain BOC52_06105 PF02887 Pyruvate kinase, alpha/beta domain BOC52_06105 PF00224 Pyruvate kinase, barrel domain BOC52_06110 PF02595 Glycerate kinase family BOC52_06115 PF07690 Major Facilitator Superfamily BOC52_06155 PF00577 Outer membrane usher protein BOC52_06155 PF13954 PapC N-terminal domain BOC52_06155 PF13953 PapC C-terminal domain BOC52_06180 PF09456 RcsC Alpha-Beta-Loop (ABL) BOC52_06180 PF00512 His Kinase A (phospho-acceptor) domain BOC52_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_06180 PF00072 Response regulator receiver domain BOC52_06185 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_06185 PF17871 AAA lid domain BOC52_06185 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_06185 PF07724 AAA domain (Cdc48 subfamily) BOC52_06255 PF04972 BON domain BOC52_06255 PF00691 OmpA family BOC52_06290 PF00691 OmpA family BOC52_06305 PF00577 Outer membrane usher protein BOC52_06305 PF13954 PapC N-terminal domain BOC52_06305 PF13953 PapC C-terminal domain BOC52_06310 PF02753 Pili assembly chaperone PapD, C-terminal domain BOC52_06310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BOC52_06315 PF00419 Fimbrial protein BOC52_06365 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_06405 PF01894 Uncharacterised protein family UPF0047 BOC52_06430 PF16671 Actin cross-linking domain BOC52_06430 PF04717 Type VI secretion system, phage-baseplate injector BOC52_06440 PF13416 Bacterial extracellular solute-binding protein BOC52_06445 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_06450 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_06485 PF00665 Integrase core domain BOC52_06485 PF13936 Helix-turn-helix domain BOC52_06500 PF05506 Domain of unknown function (DUF756) BOC52_06500 PF04185 Phosphoesterase family BOC52_06535 PF02954 Bacterial regulatory protein, Fis family BOC52_06535 PF00072 Response regulator receiver domain BOC52_06535 PF00158 Sigma-54 interaction domain BOC52_06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_06540 PF02743 Cache domain BOC52_06540 PF00512 His Kinase A (phospho-acceptor) domain BOC52_06545 PF00083 Sugar (and other) transporter BOC52_06560 PF00816 H-NS histone family BOC52_06595 PF00005 ABC transporter BOC52_06595 PF17760 UvrA interaction domain BOC52_06595 PF17755 UvrA DNA-binding domain BOC52_06600 PF04542 Sigma-70 region 2 BOC52_06600 PF08281 Sigma-70, region 4 BOC52_06620 PF09828 Chromate resistance exported protein BOC52_06625 PF02417 Chromate transporter BOC52_06640 PF09828 Chromate resistance exported protein BOC52_06690 PF07690 Major Facilitator Superfamily BOC52_06695 PF02627 Carboxymuconolactone decarboxylase family BOC52_06700 PF12146 Serine aminopeptidase, S33 BOC52_06705 PF10397 Adenylosuccinate lyase C-terminus BOC52_06705 PF00206 Lyase BOC52_06710 PF01144 Coenzyme A transferase BOC52_06715 PF01144 Coenzyme A transferase BOC52_06720 PF01494 FAD binding domain BOC52_06725 PF03466 LysR substrate binding domain BOC52_06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_06730 PF01227 GTP cyclohydrolase I BOC52_06745 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_06775 PF00171 Aldehyde dehydrogenase family BOC52_06795 PF00582 Universal stress protein family BOC52_06800 PF13545 Crp-like helix-turn-helix domain BOC52_06800 PF00027 Cyclic nucleotide-binding domain BOC52_06805 PF03466 LysR substrate binding domain BOC52_06805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_06820 PF01938 TRAM domain BOC52_06820 PF00919 Uncharacterized protein family UPF0004 BOC52_06820 PF04055 Radical SAM superfamily BOC52_06860 PF04954 Siderophore-interacting protein BOC52_06860 PF08021 Siderophore-interacting FAD-binding domain BOC52_06880 PF01569 PAP2 superfamily BOC52_06885 PF06314 Acetoacetate decarboxylase (ADC) BOC52_06915 PF13417 Glutathione S-transferase, N-terminal domain BOC52_06915 PF00043 Glutathione S-transferase, C-terminal domain BOC52_06935 PF03466 LysR substrate binding domain BOC52_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_06940 PF00180 Isocitrate/isopropylmalate dehydrogenase BOC52_06965 PF00440 Bacterial regulatory proteins, tetR family BOC52_06980 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_06980 PF00107 Zinc-binding dehydrogenase BOC52_06985 PF00155 Aminotransferase class I and II BOC52_07035 PF13614 AAA domain BOC52_07040 PF13276 HTH-like domain BOC52_07040 PF00665 Integrase core domain BOC52_07040 PF13333 Integrase core domain BOC52_07045 PF01527 Transposase BOC52_07050 PF03960 ArsC family BOC52_07060 PF08281 Sigma-70, region 4 BOC52_07060 PF04542 Sigma-70 region 2 BOC52_07065 PF03358 NADPH-dependent FMN reductase BOC52_07070 PF00512 His Kinase A (phospho-acceptor) domain BOC52_07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_07070 PF00072 Response regulator receiver domain BOC52_07070 PF13188 PAS domain BOC52_07070 PF08448 PAS fold BOC52_07080 PF00486 Transcriptional regulatory protein, C terminal BOC52_07080 PF00072 Response regulator receiver domain BOC52_07090 PF00990 Diguanylate cyclase, GGDEF domain BOC52_07090 PF05230 MASE2 domain BOC52_07115 PF13243 Squalene-hopene cyclase C-terminal domain BOC52_07115 PF13249 Squalene-hopene cyclase N-terminal domain BOC52_07120 PF01048 Phosphorylase superfamily BOC52_07130 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_07135 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_07140 PF00005 ABC transporter BOC52_07150 PF00202 Aminotransferase class-III BOC52_07170 PF00698 Acyl transferase domain BOC52_07170 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_07170 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_07170 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_07170 PF00550 Phosphopantetheine attachment site BOC52_07170 PF08659 KR domain BOC52_07180 PF00067 Cytochrome P450 BOC52_07190 PF00005 ABC transporter BOC52_07225 PF00561 alpha/beta hydrolase fold BOC52_07230 PF00563 EAL domain BOC52_07230 PF13426 PAS domain BOC52_07230 PF05231 MASE1 BOC52_07230 PF08448 PAS fold BOC52_07230 PF00990 Diguanylate cyclase, GGDEF domain BOC52_07230 PF08447 PAS fold BOC52_07250 PF00196 Bacterial regulatory proteins, luxR family BOC52_07250 PF00072 Response regulator receiver domain BOC52_07255 PF17200 Single Cache domain 2 BOC52_07255 PF07730 Histidine kinase BOC52_07265 PF00005 ABC transporter BOC52_07265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_07285 PF00583 Acetyltransferase (GNAT) family BOC52_07310 PF01425 Amidase BOC52_07320 PF13609 Gram-negative porin BOC52_07350 PF17092 Penicillin-binding protein OB-like domain BOC52_07350 PF00905 Penicillin binding protein transpeptidase domain BOC52_07350 PF00912 Transglycosylase BOC52_07385 PF04976 DMSO reductase anchor subunit (DmsC) BOC52_07390 PF13247 4Fe-4S dicluster domain BOC52_07390 PF12800 4Fe-4S binding domain BOC52_07395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_07395 PF00384 Molybdopterin oxidoreductase BOC52_07395 PF01568 Molydopterin dinucleotide binding domain BOC52_07420 PF05853 beta-keto acid cleavage enzyme BOC52_07425 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_07430 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_07430 PF00107 Zinc-binding dehydrogenase BOC52_07440 PF17874 MalT-like TPR region BOC52_07440 PF00196 Bacterial regulatory proteins, luxR family BOC52_07445 PF13193 AMP-binding enzyme C-terminal domain BOC52_07445 PF00501 AMP-binding enzyme BOC52_07460 PF00011 Hsp20/alpha crystallin family BOC52_07475 PF03448 MgtE intracellular N domain BOC52_07475 PF00571 CBS domain BOC52_07475 PF01769 Divalent cation transporter BOC52_07485 PF00916 Sulfate permease family BOC52_07485 PF01740 STAS domain BOC52_07505 PF02867 Ribonucleotide reductase, barrel domain BOC52_07505 PF03477 ATP cone domain BOC52_07505 PF00317 Ribonucleotide reductase, all-alpha domain BOC52_07535 PF14759 Reductase C-terminal BOC52_07535 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_07540 PF05199 GMC oxidoreductase BOC52_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_07550 PF03466 LysR substrate binding domain BOC52_07575 PF00676 Dehydrogenase E1 component BOC52_07575 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal BOC52_07580 PF02779 Transketolase, pyrimidine binding domain BOC52_07580 PF02780 Transketolase, C-terminal domain BOC52_07585 PF02817 e3 binding domain BOC52_07585 PF00364 Biotin-requiring enzyme BOC52_07585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BOC52_07590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BOC52_07590 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_07610 PF01613 Flavin reductase like domain BOC52_07630 PF01648 4'-phosphopantetheinyl transferase superfamily BOC52_07640 PF00296 Luciferase-like monooxygenase BOC52_07645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_07645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BOC52_07660 PF13085 2Fe-2S iron-sulfur cluster binding domain BOC52_07665 PF02666 Phosphatidylserine decarboxylase BOC52_07680 PF00664 ABC transporter transmembrane region BOC52_07680 PF00005 ABC transporter BOC52_07700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BOC52_07705 PF16861 Carbamoyltransferase C-terminus BOC52_07705 PF02543 Carbamoyltransferase N-terminus BOC52_07725 PF00158 Sigma-54 interaction domain BOC52_07725 PF01590 GAF domain BOC52_07725 PF02954 Bacterial regulatory protein, Fis family BOC52_07740 PF00158 Sigma-54 interaction domain BOC52_07740 PF00072 Response regulator receiver domain BOC52_07740 PF02954 Bacterial regulatory protein, Fis family BOC52_07760 PF16363 GDP-mannose 4,6 dehydratase BOC52_07765 PF00534 Glycosyl transferases group 1 BOC52_07765 PF13439 Glycosyltransferase Family 4 BOC52_07775 PF04972 BON domain BOC52_07780 PF00106 short chain dehydrogenase BOC52_07825 PF00107 Zinc-binding dehydrogenase BOC52_07825 PF13823 Alcohol dehydrogenase GroES-associated BOC52_07825 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_07830 PF01566 Natural resistance-associated macrophage protein BOC52_07835 PF03167 Uracil DNA glycosylase superfamily BOC52_07845 PF00486 Transcriptional regulatory protein, C terminal BOC52_07845 PF00072 Response regulator receiver domain BOC52_07855 PF00478 IMP dehydrogenase / GMP reductase domain BOC52_07855 PF00571 CBS domain BOC52_07950 PF05974 Domain of unknown function (DUF892) BOC52_07955 PF05067 Manganese containing catalase BOC52_07965 PF04552 Sigma-54, DNA binding domain BOC52_07965 PF00309 Sigma-54 factor, Activator interacting domain (AID) BOC52_07965 PF04963 Sigma-54 factor, core binding domain BOC52_07990 PF00199 Catalase BOC52_07990 PF18011 C-terminal domain found in long catalases BOC52_07990 PF06628 Catalase-related immune-responsive BOC52_08000 PF02735 Ku70/Ku80 beta-barrel domain BOC52_08005 PF04679 ATP dependent DNA ligase C terminal region BOC52_08005 PF01068 ATP dependent DNA ligase domain BOC52_08005 PF13298 DNA polymerase Ligase (LigD) BOC52_08035 PF03466 LysR substrate binding domain BOC52_08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_08040 PF07690 Major Facilitator Superfamily BOC52_08060 PF00324 Amino acid permease BOC52_08065 PF13609 Gram-negative porin BOC52_08075 PF00155 Aminotransferase class I and II BOC52_08085 PF01037 Lrp/AsnC ligand binding domain BOC52_08105 PF00437 Type II/IV secretion system protein BOC52_08110 PF13614 AAA domain BOC52_08135 PF13629 Pilus formation protein N terminal region BOC52_08135 PF00263 Bacterial type II and III secretion system protein BOC52_08135 PF04972 BON domain BOC52_08185 PF00535 Glycosyl transferase family 2 BOC52_08220 PF03466 LysR substrate binding domain BOC52_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_08230 PF00561 alpha/beta hydrolase fold BOC52_08240 PF02554 Carbon starvation protein CstA BOC52_08240 PF13722 5TM C-terminal transporter carbon starvation CstA BOC52_08245 PF04328 Selenoprotein, putative BOC52_08265 PF00202 Aminotransferase class-III BOC52_08290 PF04055 Radical SAM superfamily BOC52_08290 PF06463 Molybdenum Cofactor Synthesis C BOC52_08295 PF02401 LytB protein BOC52_08300 PF00535 Glycosyl transferase family 2 BOC52_08315 PF01370 NAD dependent epimerase/dehydratase family BOC52_08320 PF00708 Acylphosphatase BOC52_08335 PF03972 MmgE/PrpD family BOC52_08360 PF02515 CoA-transferase family III BOC52_08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_08375 PF03466 LysR substrate binding domain BOC52_08390 PF00854 POT family BOC52_08405 PF01381 Helix-turn-helix BOC52_08405 PF07883 Cupin domain BOC52_08410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_08415 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_08420 PF12911 N-terminal TM domain of oligopeptide transport permease C BOC52_08420 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_08425 PF00005 ABC transporter BOC52_08425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_08430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_08430 PF00005 ABC transporter BOC52_08435 PF03573 outer membrane porin, OprD family BOC52_08465 PF13185 GAF domain BOC52_08465 PF02954 Bacterial regulatory protein, Fis family BOC52_08465 PF00158 Sigma-54 interaction domain BOC52_08485 PF00816 H-NS histone family BOC52_08495 PF00583 Acetyltransferase (GNAT) family BOC52_08495 PF13607 Succinyl-CoA ligase like flavodoxin domain BOC52_08495 PF13380 CoA binding domain BOC52_08505 PF01425 Amidase BOC52_08515 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_08520 PF01070 FMN-dependent dehydrogenase BOC52_08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_08525 PF03466 LysR substrate binding domain BOC52_08535 PF07690 Major Facilitator Superfamily BOC52_08535 PF00083 Sugar (and other) transporter BOC52_08555 PF00266 Aminotransferase class-V BOC52_08560 PF07690 Major Facilitator Superfamily BOC52_08565 PF00753 Metallo-beta-lactamase superfamily BOC52_08570 PF00581 Rhodanese-like domain BOC52_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_08585 PF03466 LysR substrate binding domain BOC52_08590 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_08595 PF03466 LysR substrate binding domain BOC52_08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_08615 PF04345 Chorismate lyase BOC52_08620 PF04345 Chorismate lyase BOC52_08625 PF01494 FAD binding domain BOC52_08665 PF00691 OmpA family BOC52_08665 PF13677 Membrane MotB of proton-channel complex MotA/MotB BOC52_08705 PF05638 Type VI secretion system effector, Hcp BOC52_08725 PF07724 AAA domain (Cdc48 subfamily) BOC52_08725 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_08725 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_08725 PF17871 AAA lid domain BOC52_08730 PF04717 Type VI secretion system, phage-baseplate injector BOC52_08730 PF16671 Actin cross-linking domain BOC52_08790 PF13333 Integrase core domain BOC52_08790 PF00665 Integrase core domain BOC52_08790 PF13276 HTH-like domain BOC52_08830 PF08479 POTRA domain, ShlB-type BOC52_08830 PF17287 POTRA domain BOC52_08830 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_08845 PF02796 Helix-turn-helix domain of resolvase BOC52_08845 PF00239 Resolvase, N terminal domain BOC52_08855 PF13700 Domain of unknown function (DUF4158) BOC52_08855 PF01526 Tn3 transposase DDE domain BOC52_08860 PF13700 Domain of unknown function (DUF4158) BOC52_08860 PF01526 Tn3 transposase DDE domain BOC52_08865 PF00356 Bacterial regulatory proteins, lacI family BOC52_08880 PF08402 TOBE domain BOC52_08880 PF00005 ABC transporter BOC52_08885 PF01547 Bacterial extracellular solute-binding protein BOC52_08890 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_08895 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_08900 PF16875 Glycosyl hydrolase family 36 N-terminal domain BOC52_08900 PF16874 Glycosyl hydrolase family 36 C-terminal domain BOC52_08920 PF05717 IS66 Orf2 like protein BOC52_08930 PF07929 Plasmid pRiA4b ORF-3-like protein BOC52_08940 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_08940 PF17287 POTRA domain BOC52_08940 PF08479 POTRA domain, ShlB-type BOC52_08945 PF08450 SMP-30/Gluconolactonase/LRE-like region BOC52_08950 PF00392 Bacterial regulatory proteins, gntR family BOC52_08950 PF07840 FadR C-terminal domain BOC52_08980 PF00375 Sodium:dicarboxylate symporter family BOC52_09010 PF06250 YhcG PDDEXK nuclease domain BOC52_09010 PF17761 DUF1016 N-terminal domain BOC52_09040 PF05593 RHS Repeat BOC52_09040 PF03527 RHS protein BOC52_09060 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BOC52_09060 PF05860 haemagglutination activity domain BOC52_09060 PF13332 Hemagglutinin repeat BOC52_09060 PF05594 Haemagluttinin repeat BOC52_09060 PF13018 Extended Signal Peptide of Type V secretion system BOC52_09075 PF08479 POTRA domain, ShlB-type BOC52_09075 PF17287 POTRA domain BOC52_09075 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_09135 PF00501 AMP-binding enzyme BOC52_09145 PF05853 beta-keto acid cleavage enzyme BOC52_09150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BOC52_09150 PF00289 Biotin carboxylase, N-terminal domain BOC52_09150 PF02785 Biotin carboxylase C-terminal domain BOC52_09150 PF00364 Biotin-requiring enzyme BOC52_09160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_09160 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_09160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_09165 PF01039 Carboxyl transferase domain BOC52_09180 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_09180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_09180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_09185 PF00440 Bacterial regulatory proteins, tetR family BOC52_09185 PF08361 MAATS-type transcriptional repressor, C-terminal region BOC52_09200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BOC52_09200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BOC52_09205 PF00282 Pyridoxal-dependent decarboxylase conserved domain BOC52_09215 PF00107 Zinc-binding dehydrogenase BOC52_09215 PF13823 Alcohol dehydrogenase GroES-associated BOC52_09215 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_09235 PF00282 Pyridoxal-dependent decarboxylase conserved domain BOC52_09260 PF03471 Transporter associated domain BOC52_09260 PF03741 Integral membrane protein TerC family BOC52_09265 PF03466 LysR substrate binding domain BOC52_09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_09285 PF02350 UDP-N-acetylglucosamine 2-epimerase BOC52_09330 PF01380 SIS domain BOC52_09350 PF00355 Rieske [2Fe-2S] domain BOC52_09355 PF04820 Tryptophan halogenase BOC52_09360 PF08933 Domain of unknown function (DUF1864) BOC52_09365 PF04820 Tryptophan halogenase BOC52_09380 PF01527 Transposase BOC52_09410 PF00117 Glutamine amidotransferase class-I BOC52_09410 PF06418 CTP synthase N-terminus BOC52_09425 PF03239 Iron permease FTR1 family BOC52_09445 PF00905 Penicillin binding protein transpeptidase domain BOC52_09455 PF00512 His Kinase A (phospho-acceptor) domain BOC52_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_09455 PF00672 HAMP domain BOC52_09460 PF00072 Response regulator receiver domain BOC52_09460 PF00486 Transcriptional regulatory protein, C terminal BOC52_09495 PF00082 Subtilase family BOC52_09495 PF04151 Bacterial pre-peptidase C-terminal domain BOC52_09505 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BOC52_09505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BOC52_09510 PF03167 Uracil DNA glycosylase superfamily BOC52_09515 PF00596 Class II Aldolase and Adducin N-terminal domain BOC52_09550 PF03265 Deoxyribonuclease II BOC52_09565 PF01545 Cation efflux family BOC52_09570 PF02583 Metal-sensitive transcriptional repressor BOC52_09590 PF13614 AAA domain BOC52_09590 PF02706 Chain length determinant protein BOC52_09590 PF13807 G-rich domain on putative tyrosine kinase BOC52_09635 PF04151 Bacterial pre-peptidase C-terminal domain BOC52_09635 PF09286 Pro-kumamolisin, activation domain BOC52_09650 PF00990 Diguanylate cyclase, GGDEF domain BOC52_09650 PF00072 Response regulator receiver domain BOC52_09665 PF00561 alpha/beta hydrolase fold BOC52_09670 PF00743 Flavin-binding monooxygenase-like BOC52_09675 PF00106 short chain dehydrogenase BOC52_09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_09690 PF03466 LysR substrate binding domain BOC52_09700 PF02798 Glutathione S-transferase, N-terminal domain BOC52_09720 PF01773 Na+ dependent nucleoside transporter N-terminus BOC52_09720 PF07662 Na+ dependent nucleoside transporter C-terminus BOC52_09725 PF01791 DeoC/LacD family aldolase BOC52_09745 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BOC52_09745 PF00591 Glycosyl transferase family, a/b domain BOC52_09745 PF02885 Glycosyl transferase family, helical bundle domain BOC52_09755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BOC52_09765 PF04972 BON domain BOC52_09775 PF00294 pfkB family carbohydrate kinase BOC52_09780 PF00871 Acetokinase family BOC52_09785 PF01515 Phosphate acetyl/butaryl transferase BOC52_09790 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BOC52_09790 PF00561 alpha/beta hydrolase fold BOC52_09800 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_09800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_09805 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BOC52_09820 PF00119 ATP synthase A chain BOC52_09825 PF00137 ATP synthase subunit C BOC52_09830 PF00430 ATP synthase B/B' CF(0) BOC52_09835 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_09835 PF00306 ATP synthase alpha/beta chain, C terminal domain BOC52_09835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_09840 PF00231 ATP synthase BOC52_09850 PF00107 Zinc-binding dehydrogenase BOC52_09850 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_09865 PF02203 Tar ligand binding domain homologue BOC52_09865 PF00672 HAMP domain BOC52_09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_09875 PF13426 PAS domain BOC52_09875 PF00072 Response regulator receiver domain BOC52_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_09885 PF00005 ABC transporter BOC52_09890 PF13533 Biotin-lipoyl like BOC52_09895 PF02321 Outer membrane efflux protein BOC52_09900 PF00440 Bacterial regulatory proteins, tetR family BOC52_09905 PF00582 Universal stress protein family BOC52_09920 PF00005 ABC transporter BOC52_09945 PF02203 Tar ligand binding domain homologue BOC52_09945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_09945 PF00672 HAMP domain BOC52_09950 PF00009 Elongation factor Tu GTP binding domain BOC52_09985 PF03641 Possible lysine decarboxylase BOC52_10015 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_10025 PF00027 Cyclic nucleotide-binding domain BOC52_10025 PF13545 Crp-like helix-turn-helix domain BOC52_10035 PF00106 short chain dehydrogenase BOC52_10045 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BOC52_10045 PF10996 Beta-Casp domain BOC52_10045 PF00753 Metallo-beta-lactamase superfamily BOC52_10075 PF00324 Amino acid permease BOC52_10095 PF00857 Isochorismatase family BOC52_10110 PF00106 short chain dehydrogenase BOC52_10115 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_10115 PF00175 Oxidoreductase NAD-binding domain BOC52_10115 PF00970 Oxidoreductase FAD-binding domain BOC52_10120 PF00866 Ring hydroxylating beta subunit BOC52_10125 PF00355 Rieske [2Fe-2S] domain BOC52_10125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BOC52_10135 PF03466 LysR substrate binding domain BOC52_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_10150 PF02311 AraC-like ligand binding domain BOC52_10150 PF12833 Helix-turn-helix domain BOC52_10155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_10155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_10165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BOC52_10165 PF06481 COX Aromatic Rich Motif BOC52_10170 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_10175 PF00510 Cytochrome c oxidase subunit III BOC52_10180 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BOC52_10185 PF02426 Muconolactone delta-isomerase BOC52_10190 PF00775 Dioxygenase BOC52_10190 PF04444 Catechol dioxygenase N terminus BOC52_10195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BOC52_10195 PF13378 Enolase C-terminal domain-like BOC52_10200 PF03466 LysR substrate binding domain BOC52_10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_10205 PF14525 AraC-binding-like domain BOC52_10205 PF12833 Helix-turn-helix domain BOC52_10210 PF00355 Rieske [2Fe-2S] domain BOC52_10210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BOC52_10215 PF00866 Ring hydroxylating beta subunit BOC52_10220 PF00355 Rieske [2Fe-2S] domain BOC52_10225 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_10225 PF14759 Reductase C-terminal BOC52_10230 PF01230 HIT domain BOC52_10235 PF13091 PLD-like domain BOC52_10255 PF04286 Protein of unknown function (DUF445) BOC52_10260 PF00999 Sodium/hydrogen exchanger family BOC52_10265 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_10265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_10265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_10270 PF00171 Aldehyde dehydrogenase family BOC52_10285 PF00512 His Kinase A (phospho-acceptor) domain BOC52_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_10290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_10290 PF00672 HAMP domain BOC52_10290 PF02743 Cache domain BOC52_10300 PF01739 CheR methyltransferase, SAM binding domain BOC52_10310 PF01627 Hpt domain BOC52_10310 PF00072 Response regulator receiver domain BOC52_10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_10310 PF01584 CheW-like domain BOC52_10315 PF01339 CheB methylesterase BOC52_10315 PF00072 Response regulator receiver domain BOC52_10325 PF00654 Voltage gated chloride channel BOC52_10350 PF00579 tRNA synthetases class I (W and Y) BOC52_10360 PF12833 Helix-turn-helix domain BOC52_10360 PF01965 DJ-1/PfpI family BOC52_10365 PF01965 DJ-1/PfpI family BOC52_10370 PF00005 ABC transporter BOC52_10370 PF00664 ABC transporter transmembrane region BOC52_10380 PF04261 Dyp-type peroxidase family BOC52_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_10410 PF03466 LysR substrate binding domain BOC52_10420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_10420 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_10420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_10455 PF16884 N-terminal domain of oxidoreductase BOC52_10455 PF00107 Zinc-binding dehydrogenase BOC52_10465 PF07690 Major Facilitator Superfamily BOC52_10475 PF07715 TonB-dependent Receptor Plug Domain BOC52_10475 PF00593 TonB dependent receptor BOC52_10485 PF01594 AI-2E family transporter BOC52_10515 PF03795 YCII-related domain BOC52_10520 PF03795 YCII-related domain BOC52_10530 PF04542 Sigma-70 region 2 BOC52_10530 PF08281 Sigma-70, region 4 BOC52_10545 PF01510 N-acetylmuramoyl-L-alanine amidase BOC52_10550 PF02915 Rubrerythrin BOC52_10555 PF13183 4Fe-4S dicluster domain BOC52_10555 PF02754 Cysteine-rich domain BOC52_10575 PF00483 Nucleotidyl transferase BOC52_10575 PF01050 Mannose-6-phosphate isomerase BOC52_10580 PF02397 Bacterial sugar transferase BOC52_10585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BOC52_10585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BOC52_10585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BOC52_10590 PF01451 Low molecular weight phosphotyrosine protein phosphatase BOC52_10595 PF02563 Polysaccharide biosynthesis/export protein BOC52_10595 PF10531 SLBB domain BOC52_10595 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BOC52_10600 PF02706 Chain length determinant protein BOC52_10600 PF13807 G-rich domain on putative tyrosine kinase BOC52_10600 PF13614 AAA domain BOC52_10620 PF13439 Glycosyltransferase Family 4 BOC52_10620 PF00534 Glycosyl transferases group 1 BOC52_10625 PF13439 Glycosyltransferase Family 4 BOC52_10635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BOC52_10650 PF09722 Protein of unknown function (DUF2384) BOC52_10660 PF00149 Calcineurin-like phosphoesterase BOC52_10700 PF00550 Phosphopantetheine attachment site BOC52_10700 PF13193 AMP-binding enzyme C-terminal domain BOC52_10700 PF00501 AMP-binding enzyme BOC52_10700 PF00668 Condensation domain BOC52_10715 PF00975 Thioesterase domain BOC52_10720 PF03737 Aldolase/RraA BOC52_10725 PF01063 Amino-transferase class IV BOC52_10730 PF00975 Thioesterase domain BOC52_10735 PF01118 Semialdehyde dehydrogenase, NAD binding domain BOC52_10735 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BOC52_10740 PF00682 HMGL-like BOC52_10740 PF07836 DmpG-like communication domain BOC52_10785 PF01070 FMN-dependent dehydrogenase BOC52_10795 PF13649 Methyltransferase domain BOC52_10805 PF02806 Alpha amylase, C-terminal all-beta domain BOC52_10805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BOC52_10805 PF00128 Alpha amylase, catalytic domain BOC52_10810 PF02581 Thiamine monophosphate synthase BOC52_10815 PF01595 Cyclin M transmembrane N-terminal domain BOC52_10815 PF03471 Transporter associated domain BOC52_10815 PF00571 CBS domain BOC52_10830 PF03466 LysR substrate binding domain BOC52_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_10845 PF03459 TOBE domain BOC52_10855 PF00005 ABC transporter BOC52_10855 PF17850 CysA C-terminal regulatory domain BOC52_10860 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_10875 PF01569 PAP2 superfamily BOC52_10890 PF02566 OsmC-like protein BOC52_10895 PF01047 MarR family BOC52_10910 PF01636 Phosphotransferase enzyme family BOC52_10920 PF01048 Phosphorylase superfamily BOC52_10920 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BOC52_10955 PF04463 Protein of unknown function (DUF523) BOC52_10975 PF03641 Possible lysine decarboxylase BOC52_10980 PF01367 5'-3' exonuclease, C-terminal SAM fold BOC52_10980 PF01612 3'-5' exonuclease BOC52_10980 PF00476 DNA polymerase family A BOC52_10980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BOC52_10985 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_11000 PF01738 Dienelactone hydrolase family BOC52_11020 PF02609 Exonuclease VII small subunit BOC52_11025 PF00348 Polyprenyl synthetase BOC52_11030 PF02780 Transketolase, C-terminal domain BOC52_11030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BOC52_11030 PF02779 Transketolase, pyrimidine binding domain BOC52_11035 PF02649 Type I GTP cyclohydrolase folE2 BOC52_11040 PF00814 Glycoprotease family BOC52_11050 PF01165 Ribosomal protein S21 BOC52_11060 PF01807 CHC2 zinc finger BOC52_11060 PF08275 DNA primase catalytic core, N-terminal domain BOC52_11060 PF08278 DNA primase DnaG DnaB-binding BOC52_11060 PF10410 DnaB-helicase binding domain of primase BOC52_11070 PF04546 Sigma-70, non-essential region BOC52_11070 PF04545 Sigma-70, region 4 BOC52_11070 PF04539 Sigma-70 region 3 BOC52_11070 PF03979 Sigma-70 factor, region 1.1 BOC52_11070 PF04542 Sigma-70 region 2 BOC52_11070 PF00140 Sigma-70 factor, region 1.2 BOC52_11095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BOC52_11100 PF02146 Sir2 family BOC52_11115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BOC52_11115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_11130 PF01551 Peptidase family M23 BOC52_11130 PF01476 LysM domain BOC52_11140 PF01292 Prokaryotic cytochrome b561 BOC52_11150 PF00593 TonB dependent receptor BOC52_11150 PF07715 TonB-dependent Receptor Plug Domain BOC52_11155 PF00561 alpha/beta hydrolase fold BOC52_11160 PF03280 Proteobacterial lipase chaperone protein BOC52_11170 PF00392 Bacterial regulatory proteins, gntR family BOC52_11170 PF00155 Aminotransferase class I and II BOC52_11175 PF00005 ABC transporter BOC52_11175 PF08402 TOBE domain BOC52_11185 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_11190 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_11195 PF00082 Subtilase family BOC52_11195 PF09286 Pro-kumamolisin, activation domain BOC52_11220 PF00264 Common central domain of tyrosinase BOC52_11235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BOC52_11235 PF00034 Cytochrome c BOC52_11250 PF08479 POTRA domain, ShlB-type BOC52_11250 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_11250 PF17287 POTRA domain BOC52_11255 PF05594 Haemagluttinin repeat BOC52_11255 PF13332 Hemagglutinin repeat BOC52_11255 PF05860 haemagglutination activity domain BOC52_11255 PF13018 Extended Signal Peptide of Type V secretion system BOC52_11260 PF00330 Aconitase family (aconitate hydratase) BOC52_11260 PF00694 Aconitase C-terminal domain BOC52_11265 PF03972 MmgE/PrpD family BOC52_11280 PF00056 lactate/malate dehydrogenase, NAD binding domain BOC52_11280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BOC52_11285 PF00392 Bacterial regulatory proteins, gntR family BOC52_11285 PF07702 UTRA domain BOC52_11295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BOC52_11305 PF00890 FAD binding domain BOC52_11305 PF02910 Fumarate reductase flavoprotein C-term BOC52_11310 PF13085 2Fe-2S iron-sulfur cluster binding domain BOC52_11315 PF03937 Flavinator of succinate dehydrogenase BOC52_11320 PF00285 Citrate synthase, C-terminal domain BOC52_11340 PF07350 Protein of unknown function (DUF1479) BOC52_11345 PF17831 Pyruvate dehydrogenase E1 component middle domain BOC52_11345 PF00456 Transketolase, thiamine diphosphate binding domain BOC52_11350 PF01037 Lrp/AsnC ligand binding domain BOC52_11375 PF00330 Aconitase family (aconitate hydratase) BOC52_11385 PF00694 Aconitase C-terminal domain BOC52_11390 PF00180 Isocitrate/isopropylmalate dehydrogenase BOC52_11400 PF02774 Semialdehyde dehydrogenase, dimerisation domain BOC52_11400 PF01118 Semialdehyde dehydrogenase, NAD binding domain BOC52_11410 PF01416 tRNA pseudouridine synthase BOC52_11415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BOC52_11420 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_11425 PF01555 DNA methylase BOC52_11430 PF00290 Tryptophan synthase alpha chain BOC52_11435 PF01039 Carboxyl transferase domain BOC52_11435 PF17848 Acetyl-coA carboxylase zinc finger domain BOC52_11440 PF08245 Mur ligase middle domain BOC52_11440 PF02875 Mur ligase family, glutamate ligase domain BOC52_11455 PF00156 Phosphoribosyl transferase domain BOC52_11460 PF01053 Cys/Met metabolism PLP-dependent enzyme BOC52_11475 PF01370 NAD dependent epimerase/dehydratase family BOC52_11480 PF16363 GDP-mannose 4,6 dehydratase BOC52_11485 PF01757 Acyltransferase family BOC52_11500 PF01943 Polysaccharide biosynthesis protein BOC52_11500 PF14667 Polysaccharide biosynthesis C-terminal domain BOC52_11505 PF13439 Glycosyltransferase Family 4 BOC52_11505 PF00534 Glycosyl transferases group 1 BOC52_11525 PF00483 Nucleotidyl transferase BOC52_11535 PF01757 Acyltransferase family BOC52_11560 PF13609 Gram-negative porin BOC52_11565 PF03631 Virulence factor BrkB BOC52_11585 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BOC52_11615 PF00296 Luciferase-like monooxygenase BOC52_11620 PF00296 Luciferase-like monooxygenase BOC52_11625 PF00005 ABC transporter BOC52_11655 PF01568 Molydopterin dinucleotide binding domain BOC52_11655 PF00384 Molybdopterin oxidoreductase BOC52_11655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_11660 PF00384 Molybdopterin oxidoreductase BOC52_11660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_11660 PF01568 Molydopterin dinucleotide binding domain BOC52_11665 PF13247 4Fe-4S dicluster domain BOC52_11665 PF09163 Formate dehydrogenase N, transmembrane BOC52_11670 PF01292 Prokaryotic cytochrome b561 BOC52_11675 PF04216 Protein involved in formate dehydrogenase formation BOC52_11680 PF03841 L-seryl-tRNA selenium transferase BOC52_11680 PF12390 Selenocysteine synthase N terminal BOC52_11685 PF09107 Elongation factor SelB, winged helix BOC52_11685 PF09106 Elongation factor SelB, winged helix BOC52_11685 PF00009 Elongation factor Tu GTP binding domain BOC52_11685 PF03144 Elongation factor Tu domain 2 BOC52_11830 PF00145 C-5 cytosine-specific DNA methylase BOC52_11885 PF01527 Transposase BOC52_11890 PF13276 HTH-like domain BOC52_11890 PF00665 Integrase core domain BOC52_11935 PF04860 Phage portal protein BOC52_12105 PF01425 Amidase BOC52_12140 PF00067 Cytochrome P450 BOC52_12190 PF00158 Sigma-54 interaction domain BOC52_12190 PF02954 Bacterial regulatory protein, Fis family BOC52_12190 PF00072 Response regulator receiver domain BOC52_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_12200 PF00512 His Kinase A (phospho-acceptor) domain BOC52_12210 PF07690 Major Facilitator Superfamily BOC52_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_12215 PF03466 LysR substrate binding domain BOC52_12225 PF03466 LysR substrate binding domain BOC52_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_12230 PF03328 HpcH/HpaI aldolase/citrate lyase family BOC52_12235 PF01575 MaoC like domain BOC52_12240 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BOC52_12240 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BOC52_12245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_12245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_12245 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_12265 PF00202 Aminotransferase class-III BOC52_12275 PF00550 Phosphopantetheine attachment site BOC52_12275 PF13193 AMP-binding enzyme C-terminal domain BOC52_12275 PF00501 AMP-binding enzyme BOC52_12275 PF07993 Male sterility protein BOC52_12275 PF00668 Condensation domain BOC52_12280 PF00501 AMP-binding enzyme BOC52_12280 PF00550 Phosphopantetheine attachment site BOC52_12280 PF00668 Condensation domain BOC52_12280 PF13193 AMP-binding enzyme C-terminal domain BOC52_12285 PF00975 Thioesterase domain BOC52_12285 PF00550 Phosphopantetheine attachment site BOC52_12285 PF00668 Condensation domain BOC52_12285 PF13193 AMP-binding enzyme C-terminal domain BOC52_12285 PF00501 AMP-binding enzyme BOC52_12310 PF01311 Bacterial export proteins, family 1 BOC52_12320 PF18269 T3SS EscN ATPase C-terminal domain BOC52_12320 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_12320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_12335 PF01514 Secretory protein of YscJ/FliF family BOC52_12350 PF01312 FlhB HrpN YscU SpaS Family BOC52_12355 PF00771 FHIPEP family BOC52_12370 PF00813 FliP family BOC52_12375 PF01313 Bacterial export proteins, family 3 BOC52_12410 PF12833 Helix-turn-helix domain BOC52_12450 PF00486 Transcriptional regulatory protein, C terminal BOC52_12450 PF00072 Response regulator receiver domain BOC52_12460 PF00437 Type II/IV secretion system protein BOC52_12475 PF00263 Bacterial type II and III secretion system protein BOC52_12475 PF07655 Secretin N-terminal domain BOC52_12490 PF00437 Type II/IV secretion system protein BOC52_12570 PF00491 Arginase family BOC52_12590 PF13657 HipA N-terminal domain BOC52_12590 PF07804 HipA-like C-terminal domain BOC52_12615 PF03170 Bacterial cellulose synthase subunit BOC52_12620 PF01270 Glycosyl hydrolases family 8 BOC52_12625 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BOC52_12645 PF03552 Cellulose synthase BOC52_12645 PF00535 Glycosyl transferase family 2 BOC52_12645 PF07238 PilZ domain BOC52_12650 PF11658 Cellulose biosynthesis protein BcsG BOC52_12660 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_12670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BOC52_12675 PF00005 ABC transporter BOC52_12680 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_12685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_12685 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_12690 PF00765 Autoinducer synthase BOC52_12705 PF00501 AMP-binding enzyme BOC52_12705 PF13193 AMP-binding enzyme C-terminal domain BOC52_12715 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA BOC52_12725 PF01384 Phosphate transporter family BOC52_12735 PF01037 Lrp/AsnC ligand binding domain BOC52_12740 PF01810 LysE type translocator BOC52_12745 PF09286 Pro-kumamolisin, activation domain BOC52_12745 PF00082 Subtilase family BOC52_12760 PF01070 FMN-dependent dehydrogenase BOC52_12775 PF00083 Sugar (and other) transporter BOC52_12805 PF02868 Thermolysin metallopeptidase, alpha-helical domain BOC52_12805 PF01483 Proprotein convertase P-domain BOC52_12805 PF01447 Thermolysin metallopeptidase, catalytic domain BOC52_12805 PF07504 Fungalysin/Thermolysin Propeptide Motif BOC52_12855 PF01514 Secretory protein of YscJ/FliF family BOC52_12865 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BOC52_12870 PF09480 Type III secretion system protein PrgH-EprH (PrgH) BOC52_12890 PF07201 HrpJ-like domain BOC52_12895 PF00771 FHIPEP family BOC52_12905 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_12905 PF18269 T3SS EscN ATPase C-terminal domain BOC52_12905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_12925 PF00813 FliP family BOC52_12930 PF01313 Bacterial export proteins, family 3 BOC52_12935 PF01311 Bacterial export proteins, family 1 BOC52_12940 PF01312 FlhB HrpN YscU SpaS Family BOC52_12945 PF07720 Tetratricopeptide repeat BOC52_12950 PF04888 Secretion system effector C (SseC) like family BOC52_12950 PF16535 Type III cell invasion protein SipB BOC52_12955 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) BOC52_12960 PF00816 H-NS histone family BOC52_12965 PF06511 Type III secretion systems tip complex components BOC52_12975 PF00550 Phosphopantetheine attachment site BOC52_12980 PF01464 Transglycosylase SLT domain BOC52_12985 PF07487 SopE GEF domain BOC52_12995 PF09119 SicP binding BOC52_13010 PF00072 Response regulator receiver domain BOC52_13010 PF00196 Bacterial regulatory proteins, luxR family BOC52_13035 PF01609 Transposase DDE domain BOC52_13140 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_13140 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_13140 PF07724 AAA domain (Cdc48 subfamily) BOC52_13140 PF17871 AAA lid domain BOC52_13180 PF00512 His Kinase A (phospho-acceptor) domain BOC52_13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_13185 PF00486 Transcriptional regulatory protein, C terminal BOC52_13185 PF00072 Response regulator receiver domain BOC52_13200 PF13018 Extended Signal Peptide of Type V secretion system BOC52_13200 PF03895 YadA-like membrane anchor domain BOC52_13200 PF05658 Head domain of trimeric autotransporter adhesin BOC52_13200 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_13210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BOC52_13215 PF01510 N-acetylmuramoyl-L-alanine amidase BOC52_13235 PF07732 Multicopper oxidase BOC52_13250 PF09370 Phosphoenolpyruvate hydrolase-like BOC52_13265 PF02540 NAD synthase BOC52_13295 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_13295 PF00107 Zinc-binding dehydrogenase BOC52_13300 PF13378 Enolase C-terminal domain-like BOC52_13300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BOC52_13310 PF08125 Mannitol dehydrogenase C-terminal domain BOC52_13310 PF01232 Mannitol dehydrogenase Rossmann domain BOC52_13320 PF07690 Major Facilitator Superfamily BOC52_13330 PF00455 DeoR C terminal sensor domain BOC52_13330 PF08220 DeoR-like helix-turn-helix domain BOC52_13350 PF00440 Bacterial regulatory proteins, tetR family BOC52_13360 PF01266 FAD dependent oxidoreductase BOC52_13375 PF03466 LysR substrate binding domain BOC52_13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_13390 PF00155 Aminotransferase class I and II BOC52_13395 PF00171 Aldehyde dehydrogenase family BOC52_13400 PF02424 ApbE family BOC52_13425 PF00486 Transcriptional regulatory protein, C terminal BOC52_13425 PF00072 Response regulator receiver domain BOC52_13430 PF00512 His Kinase A (phospho-acceptor) domain BOC52_13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_13445 PF00083 Sugar (and other) transporter BOC52_13485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BOC52_13485 PF00355 Rieske [2Fe-2S] domain BOC52_13500 PF07732 Multicopper oxidase BOC52_13530 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_13530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_13530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_13535 PF01039 Carboxyl transferase domain BOC52_13540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BOC52_13540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BOC52_13540 PF00378 Enoyl-CoA hydratase/isomerase BOC52_13550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BOC52_13550 PF00364 Biotin-requiring enzyme BOC52_13550 PF00289 Biotin carboxylase, N-terminal domain BOC52_13550 PF02785 Biotin carboxylase C-terminal domain BOC52_13570 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_13570 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_13570 PF05658 Head domain of trimeric autotransporter adhesin BOC52_13570 PF03895 YadA-like membrane anchor domain BOC52_13570 PF13018 Extended Signal Peptide of Type V secretion system BOC52_13570 PF05658 Head domain of trimeric autotransporter adhesin BOC52_13570 PF03895 YadA-like membrane anchor domain BOC52_13570 PF13018 Extended Signal Peptide of Type V secretion system BOC52_13595 PF05658 Head domain of trimeric autotransporter adhesin BOC52_13595 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_13595 PF03895 YadA-like membrane anchor domain BOC52_13600 PF01758 Sodium Bile acid symporter family BOC52_13615 PF01022 Bacterial regulatory protein, arsR family BOC52_13635 PF03358 NADPH-dependent FMN reductase BOC52_13650 PF00005 ABC transporter BOC52_13650 PF00571 CBS domain BOC52_13655 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_13660 PF01965 DJ-1/PfpI family BOC52_13660 PF12833 Helix-turn-helix domain BOC52_13665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BOC52_13700 PF01370 NAD dependent epimerase/dehydratase family BOC52_13705 PF01261 Xylose isomerase-like TIM barrel BOC52_13710 PF07690 Major Facilitator Superfamily BOC52_13715 PF00596 Class II Aldolase and Adducin N-terminal domain BOC52_13720 PF07005 Sugar-binding N-terminal domain BOC52_13720 PF17042 Nucleotide-binding C-terminal domain BOC52_13725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_13725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BOC52_13730 PF07729 FCD domain BOC52_13730 PF00392 Bacterial regulatory proteins, gntR family BOC52_13790 PF01313 Bacterial export proteins, family 3 BOC52_13795 PF00813 FliP family BOC52_13810 PF00771 FHIPEP family BOC52_13815 PF01312 FlhB HrpN YscU SpaS Family BOC52_13830 PF01514 Secretory protein of YscJ/FliF family BOC52_13845 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_13845 PF18269 T3SS EscN ATPase C-terminal domain BOC52_13845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_13860 PF12833 Helix-turn-helix domain BOC52_13900 PF13700 Domain of unknown function (DUF4158) BOC52_13900 PF01526 Tn3 transposase DDE domain BOC52_13910 PF09312 SurA N-terminal domain BOC52_13910 PF00639 PPIC-type PPIASE domain BOC52_13930 PF13396 Phospholipase_D-nuclease N-terminal BOC52_13930 PF13091 PLD-like domain BOC52_13940 PF02308 MgtC family BOC52_13955 PF01654 Cytochrome bd terminal oxidase subunit I BOC52_13960 PF02322 Cytochrome bd terminal oxidase subunit II BOC52_13990 PF04337 Protein of unknown function, DUF480 BOC52_14000 PF12833 Helix-turn-helix domain BOC52_14000 PF01965 DJ-1/PfpI family BOC52_14005 PF03315 Serine dehydratase beta chain BOC52_14005 PF03313 Serine dehydratase alpha chain BOC52_14010 PF01266 FAD dependent oxidoreductase BOC52_14015 PF04267 Sarcosine oxidase, delta subunit family BOC52_14020 PF17806 Sarcosine oxidase A3 domain BOC52_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_14020 PF08669 Glycine cleavage T-protein C-terminal barrel domain BOC52_14020 PF01571 Aminomethyltransferase folate-binding domain BOC52_14050 PF01165 Ribosomal protein S21 BOC52_14060 PF00313 'Cold-shock' DNA-binding domain BOC52_14090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_14090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BOC52_14105 PF08446 PAS fold BOC52_14105 PF00360 Phytochrome region BOC52_14105 PF00512 His Kinase A (phospho-acceptor) domain BOC52_14105 PF01590 GAF domain BOC52_14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_14110 PF00072 Response regulator receiver domain BOC52_14115 PF17200 Single Cache domain 2 BOC52_14115 PF07730 Histidine kinase BOC52_14145 PF05199 GMC oxidoreductase BOC52_14145 PF00732 GMC oxidoreductase BOC52_14150 PF00171 Aldehyde dehydrogenase family BOC52_14155 PF00440 Bacterial regulatory proteins, tetR family BOC52_14155 PF13977 BetI-type transcriptional repressor, C-terminal BOC52_14160 PF00561 alpha/beta hydrolase fold BOC52_14170 PF03033 Glycosyltransferase family 28 N-terminal domain BOC52_14175 PF07690 Major Facilitator Superfamily BOC52_14180 PF00535 Glycosyl transferase family 2 BOC52_14185 PF02321 Outer membrane efflux protein BOC52_14195 PF00529 HlyD membrane-fusion protein of T1SS BOC52_14195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_14210 PF00326 Prolyl oligopeptidase family BOC52_14210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BOC52_14225 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_14240 PF00266 Aminotransferase class-V BOC52_14245 PF01292 Prokaryotic cytochrome b561 BOC52_14260 PF04143 Sulphur transport BOC52_14270 PF00583 Acetyltransferase (GNAT) family BOC52_14290 PF04072 Leucine carboxyl methyltransferase BOC52_14295 PF03150 Di-haem cytochrome c peroxidase BOC52_14305 PF04909 Amidohydrolase BOC52_14315 PF00392 Bacterial regulatory proteins, gntR family BOC52_14315 PF07702 UTRA domain BOC52_14320 PF07690 Major Facilitator Superfamily BOC52_14330 PF01037 Lrp/AsnC ligand binding domain BOC52_14335 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_14345 PF12833 Helix-turn-helix domain BOC52_14345 PF12852 Cupin BOC52_14370 PF02913 FAD linked oxidases, C-terminal domain BOC52_14370 PF01565 FAD binding domain BOC52_14380 PF02272 DHHA1 domain BOC52_14380 PF01411 tRNA synthetases class II (A) BOC52_14380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BOC52_14390 PF00133 tRNA synthetases class I (I, L, M and V) BOC52_14390 PF08264 Anticodon-binding domain of tRNA BOC52_14410 PF04185 Phosphoesterase family BOC52_14420 PF00144 Beta-lactamase BOC52_14425 PF02028 BCCT, betaine/carnitine/choline family transporter BOC52_14440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_14440 PF00005 ABC transporter BOC52_14450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_14455 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_14460 PF12911 N-terminal TM domain of oligopeptide transport permease C BOC52_14460 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_14465 PF03576 Peptidase family S58 BOC52_14480 PF00775 Dioxygenase BOC52_14480 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BOC52_14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_14485 PF03466 LysR substrate binding domain BOC52_14515 PF00793 DAHP synthetase I family BOC52_14535 PF13520 Amino acid permease BOC52_14545 PF00270 DEAD/DEAH box helicase BOC52_14545 PF00271 Helicase conserved C-terminal domain BOC52_14545 PF08494 DEAD/H associated BOC52_14575 PF02321 Outer membrane efflux protein BOC52_14590 PF00005 ABC transporter BOC52_14590 PF03412 Peptidase C39 family BOC52_14590 PF00664 ABC transporter transmembrane region BOC52_14615 PF03976 Polyphosphate kinase 2 (PPK2) BOC52_14630 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_14630 PF00585 C-terminal regulatory domain of Threonine dehydratase BOC52_14640 PF01593 Flavin containing amine oxidoreductase BOC52_14660 PF01205 Uncharacterized protein family UPF0029 BOC52_14660 PF09186 Domain of unknown function (DUF1949) BOC52_14670 PF08281 Sigma-70, region 4 BOC52_14670 PF04542 Sigma-70 region 2 BOC52_14680 PF00501 AMP-binding enzyme BOC52_14705 PF00550 Phosphopantetheine attachment site BOC52_14705 PF00668 Condensation domain BOC52_14705 PF13193 AMP-binding enzyme C-terminal domain BOC52_14705 PF00501 AMP-binding enzyme BOC52_14710 PF07690 Major Facilitator Superfamily BOC52_14715 PF03621 MbtH-like protein BOC52_14720 PF13193 AMP-binding enzyme C-terminal domain BOC52_14720 PF00668 Condensation domain BOC52_14720 PF00501 AMP-binding enzyme BOC52_14720 PF00975 Thioesterase domain BOC52_14720 PF00550 Phosphopantetheine attachment site BOC52_14780 PF00465 Iron-containing alcohol dehydrogenase BOC52_14785 PF00107 Zinc-binding dehydrogenase BOC52_14785 PF16884 N-terminal domain of oxidoreductase BOC52_14805 PF02515 CoA-transferase family III BOC52_14820 PF03466 LysR substrate binding domain BOC52_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_14835 PF03466 LysR substrate binding domain BOC52_14840 PF00083 Sugar (and other) transporter BOC52_14840 PF07690 Major Facilitator Superfamily BOC52_14845 PF07687 Peptidase dimerisation domain BOC52_14845 PF01546 Peptidase family M20/M25/M40 BOC52_14850 PF00850 Histone deacetylase domain BOC52_14880 PF01227 GTP cyclohydrolase I BOC52_14890 PF00005 ABC transporter BOC52_14895 PF03861 ANTAR domain BOC52_14895 PF08376 Nitrate and nitrite sensing BOC52_14900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_14915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BOC52_14915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BOC52_14915 PF04324 BFD-like [2Fe-2S] binding domain BOC52_14915 PF18267 Rubredoxin NAD+ reductase C-terminal domain BOC52_14920 PF13806 Rieske-like [2Fe-2S] domain BOC52_14925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_14925 PF00384 Molybdopterin oxidoreductase BOC52_14925 PF01568 Molydopterin dinucleotide binding domain BOC52_14940 PF00905 Penicillin binding protein transpeptidase domain BOC52_14940 PF03717 Penicillin-binding Protein dimerisation domain BOC52_14945 PF07943 Penicillin-binding protein 5, C-terminal domain BOC52_14945 PF00768 D-alanyl-D-alanine carboxypeptidase BOC52_14960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BOC52_14960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BOC52_14970 PF00005 ABC transporter BOC52_14970 PF08402 TOBE domain BOC52_14975 PF00107 Zinc-binding dehydrogenase BOC52_14975 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_14980 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_14985 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_15010 PF07690 Major Facilitator Superfamily BOC52_15015 PF08220 DeoR-like helix-turn-helix domain BOC52_15015 PF00455 DeoR C terminal sensor domain BOC52_15070 PF02254 TrkA-N domain BOC52_15070 PF00999 Sodium/hydrogen exchanger family BOC52_15085 PF00348 Polyprenyl synthetase BOC52_15090 PF01494 FAD binding domain BOC52_15115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BOC52_15125 PF00905 Penicillin binding protein transpeptidase domain BOC52_15125 PF03717 Penicillin-binding Protein dimerisation domain BOC52_15135 PF00672 HAMP domain BOC52_15135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_15135 PF17200 Single Cache domain 2 BOC52_15155 PF02581 Thiamine monophosphate synthase BOC52_15160 PF07690 Major Facilitator Superfamily BOC52_15185 PF00665 Integrase core domain BOC52_15185 PF13276 HTH-like domain BOC52_15185 PF13333 Integrase core domain BOC52_15190 PF01527 Transposase BOC52_15215 PF00872 Transposase, Mutator family BOC52_15230 PF00593 TonB dependent receptor BOC52_15230 PF07715 TonB-dependent Receptor Plug Domain BOC52_15240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BOC52_15240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BOC52_15260 PF02627 Carboxymuconolactone decarboxylase family BOC52_15265 PF00155 Aminotransferase class I and II BOC52_15265 PF00392 Bacterial regulatory proteins, gntR family BOC52_15290 PF13193 AMP-binding enzyme C-terminal domain BOC52_15290 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_15290 PF00550 Phosphopantetheine attachment site BOC52_15290 PF00202 Aminotransferase class-III BOC52_15290 PF00668 Condensation domain BOC52_15290 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_15290 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_15290 PF00501 AMP-binding enzyme BOC52_15295 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_15300 PF00668 Condensation domain BOC52_15300 PF00550 Phosphopantetheine attachment site BOC52_15300 PF00975 Thioesterase domain BOC52_15300 PF00501 AMP-binding enzyme BOC52_15300 PF13193 AMP-binding enzyme C-terminal domain BOC52_15305 PF00501 AMP-binding enzyme BOC52_15305 PF13193 AMP-binding enzyme C-terminal domain BOC52_15305 PF00550 Phosphopantetheine attachment site BOC52_15305 PF00668 Condensation domain BOC52_15320 PF00296 Luciferase-like monooxygenase BOC52_15325 PF00501 AMP-binding enzyme BOC52_15330 PF08659 KR domain BOC52_15330 PF14765 Polyketide synthase dehydratase BOC52_15330 PF00550 Phosphopantetheine attachment site BOC52_15330 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_15330 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_15330 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_15330 PF00698 Acyl transferase domain BOC52_15375 PF00550 Phosphopantetheine attachment site BOC52_15375 PF00668 Condensation domain BOC52_15375 PF13193 AMP-binding enzyme C-terminal domain BOC52_15375 PF00501 AMP-binding enzyme BOC52_15380 PF00765 Autoinducer synthase BOC52_15390 PF00999 Sodium/hydrogen exchanger family BOC52_15400 PF00196 Bacterial regulatory proteins, luxR family BOC52_15400 PF03472 Autoinducer binding domain BOC52_15410 PF01432 Peptidase family M3 BOC52_15415 PF00501 AMP-binding enzyme BOC52_15415 PF00668 Condensation domain BOC52_15415 PF00550 Phosphopantetheine attachment site BOC52_15415 PF00975 Thioesterase domain BOC52_15415 PF13193 AMP-binding enzyme C-terminal domain BOC52_15420 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_15420 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_15420 PF00550 Phosphopantetheine attachment site BOC52_15420 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_15420 PF00668 Condensation domain BOC52_15420 PF00698 Acyl transferase domain BOC52_15425 PF00550 Phosphopantetheine attachment site BOC52_15425 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_15425 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_15425 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_15425 PF00668 Condensation domain BOC52_15425 PF00698 Acyl transferase domain BOC52_15430 PF00501 AMP-binding enzyme BOC52_15430 PF13193 AMP-binding enzyme C-terminal domain BOC52_15430 PF00668 Condensation domain BOC52_15430 PF00550 Phosphopantetheine attachment site BOC52_15435 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_15435 PF00550 Phosphopantetheine attachment site BOC52_15435 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_15435 PF00668 Condensation domain BOC52_15435 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_15435 PF00698 Acyl transferase domain BOC52_15440 PF12706 Beta-lactamase superfamily domain BOC52_15440 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain BOC52_15480 PF00027 Cyclic nucleotide-binding domain BOC52_15480 PF13545 Crp-like helix-turn-helix domain BOC52_15485 PF00196 Bacterial regulatory proteins, luxR family BOC52_15485 PF00072 Response regulator receiver domain BOC52_15500 PF03824 High-affinity nickel-transport protein BOC52_15515 PF02979 Nitrile hydratase, alpha chain BOC52_15525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BOC52_15525 PF03625 Domain of unknown function DUF302 BOC52_15530 PF02627 Carboxymuconolactone decarboxylase family BOC52_15540 PF01609 Transposase DDE domain BOC52_15550 PF00072 Response regulator receiver domain BOC52_15550 PF00196 Bacterial regulatory proteins, luxR family BOC52_15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_15555 PF07730 Histidine kinase BOC52_15555 PF05231 MASE1 BOC52_15565 PF00384 Molybdopterin oxidoreductase BOC52_15565 PF01568 Molydopterin dinucleotide binding domain BOC52_15565 PF14710 Respiratory nitrate reductase alpha N-terminal BOC52_15570 PF13247 4Fe-4S dicluster domain BOC52_15570 PF14711 Respiratory nitrate reductase beta C-terminal BOC52_15575 PF02613 Nitrate reductase delta subunit BOC52_15580 PF02665 Nitrate reductase gamma subunit BOC52_15585 PF00639 PPIC-type PPIASE domain BOC52_15585 PF09312 SurA N-terminal domain BOC52_15590 PF07690 Major Facilitator Superfamily BOC52_15625 PF00361 Proton-conducting membrane transporter BOC52_15630 PF00146 NADH dehydrogenase BOC52_15640 PF00361 Proton-conducting membrane transporter BOC52_15645 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BOC52_15650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BOC52_15660 PF00582 Universal stress protein family BOC52_15700 PF02110 Hydroxyethylthiazole kinase family BOC52_15705 PF10400 Virulence activator alpha C-term BOC52_15705 PF03551 Transcriptional regulator PadR-like family BOC52_15710 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_15710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_15740 PF07690 Major Facilitator Superfamily BOC52_15755 PF01872 RibD C-terminal domain BOC52_15755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BOC52_15760 PF03781 Sulfatase-modifying factor enzyme 1 BOC52_15760 PF12867 DinB superfamily BOC52_15775 PF00925 GTP cyclohydrolase II BOC52_15785 PF02321 Outer membrane efflux protein BOC52_15790 PF00873 AcrB/AcrD/AcrF family BOC52_15795 PF13533 Biotin-lipoyl like BOC52_15805 PF07969 Amidohydrolase family BOC52_15820 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_15820 PF01434 Peptidase family M41 BOC52_15820 PF17862 AAA+ lid domain BOC52_15835 PF13520 Amino acid permease BOC52_15865 PF00293 NUDIX domain BOC52_15885 PF08543 Phosphomethylpyrimidine kinase BOC52_15890 PF01547 Bacterial extracellular solute-binding protein BOC52_15915 PF00690 Cation transporter/ATPase, N-terminus BOC52_15915 PF00689 Cation transporting ATPase, C-terminus BOC52_15950 PF09587 Bacterial capsule synthesis protein PGA_cap BOC52_15960 PF00012 Hsp70 protein BOC52_16000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BOC52_16000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BOC52_16040 PF02321 Outer membrane efflux protein BOC52_16045 PF00529 HlyD membrane-fusion protein of T1SS BOC52_16045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_16050 PF00873 AcrB/AcrD/AcrF family BOC52_16055 PF00072 Response regulator receiver domain BOC52_16055 PF00486 Transcriptional regulatory protein, C terminal BOC52_16060 PF00672 HAMP domain BOC52_16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_16060 PF00512 His Kinase A (phospho-acceptor) domain BOC52_16085 PF00083 Sugar (and other) transporter BOC52_16095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_16095 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_16095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_16130 PF00005 ABC transporter BOC52_16135 PF02653 Branched-chain amino acid transport system / permease component BOC52_16140 PF02653 Branched-chain amino acid transport system / permease component BOC52_16145 PF07715 TonB-dependent Receptor Plug Domain BOC52_16150 PF04773 FecR protein BOC52_16150 PF16220 Domain of unknown function (DUF4880) BOC52_16155 PF04542 Sigma-70 region 2 BOC52_16155 PF08281 Sigma-70, region 4 BOC52_16175 PF04264 YceI-like domain BOC52_16185 PF04542 Sigma-70 region 2 BOC52_16185 PF08281 Sigma-70, region 4 BOC52_16205 PF01557 Fumarylacetoacetate (FAA) hydrolase family BOC52_16230 PF01699 Sodium/calcium exchanger protein BOC52_16240 PF03466 LysR substrate binding domain BOC52_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_16260 PF00654 Voltage gated chloride channel BOC52_16270 PF07690 Major Facilitator Superfamily BOC52_16275 PF01494 FAD binding domain BOC52_16280 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_16280 PF08659 KR domain BOC52_16280 PF00550 Phosphopantetheine attachment site BOC52_16280 PF14765 Polyketide synthase dehydratase BOC52_16280 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_16280 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_16290 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_16290 PF00550 Phosphopantetheine attachment site BOC52_16290 PF14765 Polyketide synthase dehydratase BOC52_16290 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_16290 PF08659 KR domain BOC52_16290 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_16295 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_16295 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_16295 PF00668 Condensation domain BOC52_16295 PF14765 Polyketide synthase dehydratase BOC52_16295 PF13193 AMP-binding enzyme C-terminal domain BOC52_16295 PF00550 Phosphopantetheine attachment site BOC52_16295 PF00501 AMP-binding enzyme BOC52_16295 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_16295 PF08659 KR domain BOC52_16300 PF00999 Sodium/hydrogen exchanger family BOC52_16300 PF02254 TrkA-N domain BOC52_16300 PF02080 TrkA-C domain BOC52_16305 PF04461 Protein of unknown function (DUF520) BOC52_16310 PF02660 Glycerol-3-phosphate acyltransferase BOC52_16315 PF04073 Aminoacyl-tRNA editing domain BOC52_16320 PF13193 AMP-binding enzyme C-terminal domain BOC52_16320 PF00501 AMP-binding enzyme BOC52_16325 PF00589 Phage integrase family BOC52_16325 PF02899 Phage integrase, N-terminal SAM-like domain BOC52_16335 PF08331 Domain of unknown function (DUF1730) BOC52_16340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BOC52_16345 PF01520 N-acetylmuramoyl-L-alanine amidase BOC52_16345 PF11741 AMIN domain BOC52_16350 PF00892 EamA-like transporter family BOC52_16355 PF05726 Pirin C-terminal cupin domain BOC52_16355 PF02678 Pirin BOC52_16360 PF00085 Thioredoxin BOC52_16370 PF00899 ThiF family BOC52_16375 PF01243 Pyridoxamine 5'-phosphate oxidase BOC52_16375 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BOC52_16395 PF01625 Peptide methionine sulfoxide reductase BOC52_16405 PF01613 Flavin reductase like domain BOC52_16410 PF01037 Lrp/AsnC ligand binding domain BOC52_16415 PF04199 Putative cyclase BOC52_16420 PF00266 Aminotransferase class-V BOC52_16425 PF03301 Tryptophan 2,3-dioxygenase BOC52_16430 PF07690 Major Facilitator Superfamily BOC52_16440 PF02558 Ketopantoate reductase PanE/ApbA BOC52_16440 PF08546 Ketopantoate reductase PanE/ApbA C terminal BOC52_16445 PF00171 Aldehyde dehydrogenase family BOC52_16450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_16450 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_16450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_16455 PF03466 LysR substrate binding domain BOC52_16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_16460 PF01232 Mannitol dehydrogenase Rossmann domain BOC52_16460 PF08125 Mannitol dehydrogenase C-terminal domain BOC52_16465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BOC52_16465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BOC52_16470 PF04198 Putative sugar-binding domain BOC52_16480 PF00144 Beta-lactamase BOC52_16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_16485 PF03466 LysR substrate binding domain BOC52_16500 PF00005 ABC transporter BOC52_16500 PF08402 TOBE domain BOC52_16505 PF13419 Haloacid dehalogenase-like hydrolase BOC52_16510 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_16515 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_16525 PF08013 Tagatose 6 phosphate kinase BOC52_16530 PF00294 pfkB family carbohydrate kinase BOC52_16540 PF01475 Ferric uptake regulator family BOC52_16550 PF00005 ABC transporter BOC52_16555 PF00950 ABC 3 transport family BOC52_16560 PF00756 Putative esterase BOC52_16565 PF00107 Zinc-binding dehydrogenase BOC52_16565 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_16570 PF01965 DJ-1/PfpI family BOC52_16570 PF12833 Helix-turn-helix domain BOC52_16575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BOC52_16575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BOC52_16580 PF00860 Permease family BOC52_16590 PF02321 Outer membrane efflux protein BOC52_16595 PF00873 AcrB/AcrD/AcrF family BOC52_16600 PF00529 HlyD membrane-fusion protein of T1SS BOC52_16600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_16610 PF08361 MAATS-type transcriptional repressor, C-terminal region BOC52_16610 PF00440 Bacterial regulatory proteins, tetR family BOC52_16630 PF13180 PDZ domain BOC52_16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_16640 PF00512 His Kinase A (phospho-acceptor) domain BOC52_16645 PF00072 Response regulator receiver domain BOC52_16645 PF00486 Transcriptional regulatory protein, C terminal BOC52_16655 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BOC52_16665 PF04116 Fatty acid hydroxylase superfamily BOC52_16680 PF01300 Telomere recombination BOC52_16680 PF03481 Putative GTP-binding controlling metal-binding BOC52_16685 PF02222 ATP-grasp domain BOC52_16685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BOC52_16690 PF00731 AIR carboxylase BOC52_16695 PF01259 SAICAR synthetase BOC52_16700 PF01116 Fructose-bisphosphate aldolase class-II BOC52_16705 PF00224 Pyruvate kinase, barrel domain BOC52_16705 PF02887 Pyruvate kinase, alpha/beta domain BOC52_16715 PF00162 Phosphoglycerate kinase BOC52_16730 PF01063 Amino-transferase class IV BOC52_16740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BOC52_16750 PF00561 alpha/beta hydrolase fold BOC52_16760 PF01435 Peptidase family M48 BOC52_16760 PF13181 Tetratricopeptide repeat BOC52_16765 PF01967 MoaC family BOC52_16790 PF15864 Protein glycosylation ligase BOC52_16790 PF11846 Virulence factor membrane-bound polymerase, C-terminal BOC52_16790 PF04932 O-Antigen ligase BOC52_16795 PF00114 Pilin (bacterial filament) BOC52_16795 PF07963 Prokaryotic N-terminal methylation motif BOC52_16800 PF03741 Integral membrane protein TerC family BOC52_16805 PF00549 CoA-ligase BOC52_16805 PF02629 CoA binding domain BOC52_16810 PF00549 CoA-ligase BOC52_16810 PF08442 ATP-grasp domain BOC52_16820 PF02631 RecX family BOC52_16825 PF00154 recA bacterial DNA recombination protein BOC52_16830 PF00072 Response regulator receiver domain BOC52_16830 PF00486 Transcriptional regulatory protein, C terminal BOC52_16835 PF08521 Two-component sensor kinase N-terminal BOC52_16835 PF00512 His Kinase A (phospho-acceptor) domain BOC52_16835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_16840 PF00083 Sugar (and other) transporter BOC52_16840 PF08946 Osmosensory transporter coiled coil BOC52_16860 PF13683 Integrase core domain BOC52_16860 PF13276 HTH-like domain BOC52_16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_16895 PF00072 Response regulator receiver domain BOC52_16895 PF09308 LuxQ, periplasmic BOC52_16895 PF00512 His Kinase A (phospho-acceptor) domain BOC52_16900 PF03466 LysR substrate binding domain BOC52_16900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_16930 PF00732 GMC oxidoreductase BOC52_16930 PF05199 GMC oxidoreductase BOC52_16945 PF13378 Enolase C-terminal domain-like BOC52_16945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BOC52_16950 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_16950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_16950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_16955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BOC52_16960 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_16970 PF00034 Cytochrome c BOC52_16970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BOC52_16985 PF00156 Phosphoribosyl transferase domain BOC52_16985 PF05139 Erythromycin esterase BOC52_16990 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BOC52_16990 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BOC52_16995 PF00156 Phosphoribosyl transferase domain BOC52_16995 PF01738 Dienelactone hydrolase family BOC52_17000 PF00156 Phosphoribosyl transferase domain BOC52_17000 PF05139 Erythromycin esterase BOC52_17020 PF00005 ABC transporter BOC52_17045 PF00581 Rhodanese-like domain BOC52_17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_17050 PF03466 LysR substrate binding domain BOC52_17055 PF00375 Sodium:dicarboxylate symporter family BOC52_17070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_17070 PF08447 PAS fold BOC52_17090 PF00158 Sigma-54 interaction domain BOC52_17090 PF00072 Response regulator receiver domain BOC52_17090 PF02954 Bacterial regulatory protein, Fis family BOC52_17095 PF00990 Diguanylate cyclase, GGDEF domain BOC52_17095 PF00563 EAL domain BOC52_17095 PF03707 Bacterial signalling protein N terminal repeat BOC52_17100 PF16656 Purple acid Phosphatase, N-terminal domain BOC52_17100 PF00149 Calcineurin-like phosphoesterase BOC52_17115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BOC52_17115 PF13378 Enolase C-terminal domain-like BOC52_17140 PF00034 Cytochrome c BOC52_17140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BOC52_17145 PF00271 Helicase conserved C-terminal domain BOC52_17145 PF00270 DEAD/DEAH box helicase BOC52_17165 PF00455 DeoR C terminal sensor domain BOC52_17165 PF08220 DeoR-like helix-turn-helix domain BOC52_17185 PF01266 FAD dependent oxidoreductase BOC52_17185 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BOC52_17190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BOC52_17190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BOC52_17195 PF00230 Major intrinsic protein BOC52_17210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BOC52_17215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BOC52_17220 PF13537 Glutamine amidotransferase domain BOC52_17220 PF00733 Asparagine synthase BOC52_17225 PF02655 ATP-grasp domain BOC52_17225 PF00206 Lyase BOC52_17235 PF13419 Haloacid dehalogenase-like hydrolase BOC52_17240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BOC52_17245 PF01381 Helix-turn-helix BOC52_17245 PF07883 Cupin domain BOC52_17250 PF07690 Major Facilitator Superfamily BOC52_17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_17255 PF03466 LysR substrate binding domain BOC52_17265 PF04055 Radical SAM superfamily BOC52_17265 PF01938 TRAM domain BOC52_17265 PF00919 Uncharacterized protein family UPF0004 BOC52_17270 PF02562 PhoH-like protein BOC52_17280 PF02130 Uncharacterized protein family UPF0054 BOC52_17285 PF04752 ChaC-like protein BOC52_17290 PF00571 CBS domain BOC52_17290 PF03471 Transporter associated domain BOC52_17295 PF00795 Carbon-nitrogen hydrolase BOC52_17305 PF02092 Glycyl-tRNA synthetase beta subunit BOC52_17305 PF05746 DALR anticodon binding domain BOC52_17315 PF01553 Acyltransferase BOC52_17325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BOC52_17335 PF00398 Ribosomal RNA adenine dimethylase BOC52_17340 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BOC52_17345 PF09312 SurA N-terminal domain BOC52_17345 PF00639 PPIC-type PPIASE domain BOC52_17350 PF04453 LPS transport system D BOC52_17355 PF01636 Phosphotransferase enzyme family BOC52_17360 PF00483 Nucleotidyl transferase BOC52_17370 PF00664 ABC transporter transmembrane region BOC52_17370 PF00005 ABC transporter BOC52_17380 PF03061 Thioesterase superfamily BOC52_17390 PF02634 FdhD/NarQ family BOC52_17395 PF00378 Enoyl-CoA hydratase/isomerase BOC52_17400 PF02803 Thiolase, C-terminal domain BOC52_17400 PF00108 Thiolase, N-terminal domain BOC52_17405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BOC52_17405 PF00378 Enoyl-CoA hydratase/isomerase BOC52_17405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BOC52_17410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_17410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_17410 PF12806 Acetyl-CoA dehydrogenase C-terminal like BOC52_17410 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_17420 PF13091 PLD-like domain BOC52_17425 PF00293 NUDIX domain BOC52_17435 PF02938 GAD domain BOC52_17435 PF01336 OB-fold nucleic acid binding domain BOC52_17435 PF00152 tRNA synthetases class II (D, K and N) BOC52_17455 PF03109 ABC1 family BOC52_17470 PF01209 ubiE/COQ5 methyltransferase family BOC52_17500 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_17500 PF00585 C-terminal regulatory domain of Threonine dehydratase BOC52_17505 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BOC52_17505 PF14489 QueF-like protein BOC52_17510 PF01042 Endoribonuclease L-PSP BOC52_17520 PF07969 Amidohydrolase family BOC52_17525 PF01380 SIS domain BOC52_17525 PF01418 Helix-turn-helix domain, rpiR family BOC52_17545 PF07690 Major Facilitator Superfamily BOC52_17555 PF07859 alpha/beta hydrolase fold BOC52_17580 PF13439 Glycosyltransferase Family 4 BOC52_17580 PF00534 Glycosyl transferases group 1 BOC52_17585 PF02563 Polysaccharide biosynthesis/export protein BOC52_17585 PF10531 SLBB domain BOC52_17585 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BOC52_17590 PF02397 Bacterial sugar transferase BOC52_17610 PF00550 Phosphopantetheine attachment site BOC52_17640 PF00072 Response regulator receiver domain BOC52_17640 PF00158 Sigma-54 interaction domain BOC52_17640 PF02954 Bacterial regulatory protein, Fis family BOC52_17650 PF13439 Glycosyltransferase Family 4 BOC52_17650 PF00534 Glycosyl transferases group 1 BOC52_17665 PF00483 Nucleotidyl transferase BOC52_17665 PF01050 Mannose-6-phosphate isomerase BOC52_17680 PF08448 PAS fold BOC52_17680 PF00990 Diguanylate cyclase, GGDEF domain BOC52_17680 PF00563 EAL domain BOC52_17690 PF00596 Class II Aldolase and Adducin N-terminal domain BOC52_17710 PF00069 Protein kinase domain BOC52_17750 PF00348 Polyprenyl synthetase BOC52_17800 PF02627 Carboxymuconolactone decarboxylase family BOC52_17835 PF00436 Single-strand binding protein family BOC52_17840 PF07690 Major Facilitator Superfamily BOC52_17845 PF17755 UvrA DNA-binding domain BOC52_17845 PF17760 UvrA interaction domain BOC52_17860 PF00551 Formyl transferase BOC52_17870 PF01810 LysE type translocator BOC52_17880 PF00156 Phosphoribosyl transferase domain BOC52_17885 PF02080 TrkA-C domain BOC52_17885 PF02254 TrkA-N domain BOC52_17885 PF00999 Sodium/hydrogen exchanger family BOC52_17890 PF00571 CBS domain BOC52_17890 PF01380 SIS domain BOC52_17910 PF00005 ABC transporter BOC52_17910 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_17915 PF04963 Sigma-54 factor, core binding domain BOC52_17915 PF04552 Sigma-54, DNA binding domain BOC52_17915 PF00309 Sigma-54 factor, Activator interacting domain (AID) BOC52_17925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BOC52_17930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BOC52_17935 PF02603 HPr Serine kinase N terminus BOC52_17935 PF07475 HPr Serine kinase C-terminal domain BOC52_17940 PF03668 P-loop ATPase protein family BOC52_17955 PF00633 Helix-hairpin-helix motif BOC52_17955 PF10576 Iron-sulfur binding domain of endonuclease III BOC52_17955 PF00730 HhH-GPD superfamily base excision DNA repair protein BOC52_17955 PF14815 NUDIX domain BOC52_17960 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BOC52_17960 PF06827 Zinc finger found in FPG and IleRS BOC52_17960 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BOC52_17970 PF03550 Outer membrane lipoprotein LolB BOC52_17975 PF00288 GHMP kinases N terminal domain BOC52_17975 PF08544 GHMP kinases C terminal BOC52_17985 PF14572 Phosphoribosyl synthetase-associated domain BOC52_17985 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BOC52_17990 PF01386 Ribosomal L25p family BOC52_17990 PF14693 Ribosomal protein TL5, C-terminal domain BOC52_17995 PF01195 Peptidyl-tRNA hydrolase BOC52_18000 PF00155 Aminotransferase class I and II BOC52_18005 PF00037 4Fe-4S binding domain BOC52_18010 PF01467 Cytidylyltransferase-like BOC52_18025 PF00448 SRP54-type protein, GTPase domain BOC52_18025 PF02881 SRP54-type protein, helical bundle domain BOC52_18030 PF02798 Glutathione S-transferase, N-terminal domain BOC52_18030 PF14497 Glutathione S-transferase, C-terminal domain BOC52_18040 PF04324 BFD-like [2Fe-2S] binding domain BOC52_18040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BOC52_18040 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_18040 PF18267 Rubredoxin NAD+ reductase C-terminal domain BOC52_18040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BOC52_18045 PF00355 Rieske [2Fe-2S] domain BOC52_18050 PF00384 Molybdopterin oxidoreductase BOC52_18050 PF01568 Molydopterin dinucleotide binding domain BOC52_18050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_18055 PF02885 Glycosyl transferase family, helical bundle domain BOC52_18070 PF08502 LeuA allosteric (dimerisation) domain BOC52_18070 PF00682 HMGL-like BOC52_18080 PF09411 Lipid A 3-O-deacylase (PagL) BOC52_18085 PF04542 Sigma-70 region 2 BOC52_18085 PF04545 Sigma-70, region 4 BOC52_18085 PF00140 Sigma-70 factor, region 1.2 BOC52_18095 PF01654 Cytochrome bd terminal oxidase subunit I BOC52_18100 PF02322 Cytochrome bd terminal oxidase subunit II BOC52_18105 PF08173 Membrane bound YbgT-like protein BOC52_18120 PF03173 Putative carbohydrate binding domain BOC52_18120 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BOC52_18120 PF02838 Glycosyl hydrolase family 20, domain 2 BOC52_18120 PF00728 Glycosyl hydrolase family 20, catalytic domain BOC52_18125 PF02378 Phosphotransferase system, EIIC BOC52_18125 PF00367 phosphotransferase system, EIIB BOC52_18125 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BOC52_18130 PF00391 PEP-utilising enzyme, mobile domain BOC52_18130 PF00381 PTS HPr component phosphorylation site BOC52_18130 PF05524 PEP-utilising enzyme, N-terminal BOC52_18130 PF02896 PEP-utilising enzyme, TIM barrel domain BOC52_18130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BOC52_18135 PF01380 SIS domain BOC52_18140 PF01979 Amidohydrolase family BOC52_18145 PF00392 Bacterial regulatory proteins, gntR family BOC52_18145 PF07702 UTRA domain BOC52_18155 PF03466 LysR substrate binding domain BOC52_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_18160 PF00501 AMP-binding enzyme BOC52_18200 PF13193 AMP-binding enzyme C-terminal domain BOC52_18200 PF00501 AMP-binding enzyme BOC52_18210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_18210 PF12806 Acetyl-CoA dehydrogenase C-terminal like BOC52_18210 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_18210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_18220 PF13649 Methyltransferase domain BOC52_18230 PF00005 ABC transporter BOC52_18245 PF00202 Aminotransferase class-III BOC52_18255 PF07690 Major Facilitator Superfamily BOC52_18265 PF02811 PHP domain BOC52_18265 PF07733 Bacterial DNA polymerase III alpha NTPase domain BOC52_18265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BOC52_18265 PF14579 Helix-hairpin-helix motif BOC52_18275 PF03846 Cell division inhibitor SulA BOC52_18280 PF00005 ABC transporter BOC52_18300 PF03180 NLPA lipoprotein BOC52_18310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_18310 PF00672 HAMP domain BOC52_18310 PF02203 Tar ligand binding domain homologue BOC52_18320 PF02630 SCO1/SenC BOC52_18325 PF01040 UbiA prenyltransferase family BOC52_18330 PF02628 Cytochrome oxidase assembly protein BOC52_18350 PF00510 Cytochrome c oxidase subunit III BOC52_18360 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BOC52_18370 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_18375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BOC52_18375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BOC52_18385 PF08241 Methyltransferase domain BOC52_18390 PF00156 Phosphoribosyl transferase domain BOC52_18395 PF00588 SpoU rRNA Methylase family BOC52_18400 PF01661 Macro domain BOC52_18405 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BOC52_18405 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BOC52_18410 PF02556 Preprotein translocase subunit SecB BOC52_18415 PF00462 Glutaredoxin BOC52_18420 PF00581 Rhodanese-like domain BOC52_18425 PF00300 Histidine phosphatase superfamily (branch 1) BOC52_18430 PF03572 Peptidase family S41 BOC52_18430 PF13180 PDZ domain BOC52_18435 PF00899 ThiF family BOC52_18445 PF00391 PEP-utilising enzyme, mobile domain BOC52_18445 PF02896 PEP-utilising enzyme, TIM barrel domain BOC52_18445 PF05524 PEP-utilising enzyme, N-terminal BOC52_18450 PF00381 PTS HPr component phosphorylation site BOC52_18460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BOC52_18460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BOC52_18470 PF00909 Ammonium Transporter Family BOC52_18475 PF00543 Nitrogen regulatory protein P-II BOC52_18480 PF04380 Membrane fusogenic activity BOC52_18485 PF13335 Magnesium chelatase, subunit ChlI C-terminal BOC52_18485 PF01078 Magnesium chelatase, subunit ChlI BOC52_18505 PF00501 AMP-binding enzyme BOC52_18505 PF00975 Thioesterase domain BOC52_18505 PF13193 AMP-binding enzyme C-terminal domain BOC52_18505 PF00550 Phosphopantetheine attachment site BOC52_18505 PF00668 Condensation domain BOC52_18520 PF00578 AhpC/TSA family BOC52_18525 PF00158 Sigma-54 interaction domain BOC52_18525 PF00072 Response regulator receiver domain BOC52_18525 PF02954 Bacterial regulatory protein, Fis family BOC52_18530 PF02743 Cache domain BOC52_18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_18530 PF00512 His Kinase A (phospho-acceptor) domain BOC52_18535 PF00375 Sodium:dicarboxylate symporter family BOC52_18540 PF00474 Sodium:solute symporter family BOC52_18550 PF02515 CoA-transferase family III BOC52_18555 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_18555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_18555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_18560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_18560 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_18560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_18565 PF00378 Enoyl-CoA hydratase/isomerase BOC52_18565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BOC52_18565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BOC52_18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_18570 PF03466 LysR substrate binding domain BOC52_18590 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BOC52_18590 PF04055 Radical SAM superfamily BOC52_18595 PF03099 Biotin/lipoate A/B protein ligase family BOC52_18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_18605 PF03466 LysR substrate binding domain BOC52_18610 PF04359 Protein of unknown function (DUF493) BOC52_18615 PF01063 Amino-transferase class IV BOC52_18620 PF00768 D-alanyl-D-alanine carboxypeptidase BOC52_18620 PF07943 Penicillin-binding protein 5, C-terminal domain BOC52_18655 PF00005 ABC transporter BOC52_18660 PF02405 Permease MlaE BOC52_18665 PF02872 5'-nucleotidase, C-terminal domain BOC52_18665 PF00149 Calcineurin-like phosphoesterase BOC52_18680 PF03309 Type III pantothenate kinase BOC52_18690 PF00239 Resolvase, N terminal domain BOC52_18690 PF02796 Helix-turn-helix domain of resolvase BOC52_18695 PF08479 POTRA domain, ShlB-type BOC52_18695 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_18695 PF17287 POTRA domain BOC52_18705 PF13332 Hemagglutinin repeat BOC52_18705 PF05860 haemagglutination activity domain BOC52_18705 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BOC52_18705 PF05594 Haemagluttinin repeat BOC52_18705 PF13018 Extended Signal Peptide of Type V secretion system BOC52_18740 PF13362 Toprim domain BOC52_18740 PF18818 Metallopeptidase superfamily domain BOC52_18740 PF08401 Domain of unknown function (DUF1738) BOC52_18745 PF13356 Arm DNA-binding domain BOC52_18745 PF00589 Phage integrase family BOC52_18745 PF14659 Phage integrase, N-terminal SAM-like domain BOC52_18750 PF01467 Cytidylyltransferase-like BOC52_18775 PF00378 Enoyl-CoA hydratase/isomerase BOC52_18800 PF12091 Protein of unknown function (DUF3567) BOC52_18805 PF02965 Vitamin B12 dependent methionine synthase, activation domain BOC52_18805 PF02574 Homocysteine S-methyltransferase BOC52_18805 PF00809 Pterin binding enzyme BOC52_18805 PF02607 B12 binding domain BOC52_18805 PF02310 B12 binding domain BOC52_18810 PF00809 Pterin binding enzyme BOC52_18810 PF02310 B12 binding domain BOC52_18810 PF02574 Homocysteine S-methyltransferase BOC52_18810 PF02607 B12 binding domain BOC52_18810 PF02965 Vitamin B12 dependent methionine synthase, activation domain BOC52_18820 PF05746 DALR anticodon binding domain BOC52_18820 PF00750 tRNA synthetases class I (R) BOC52_18820 PF03485 Arginyl tRNA synthetase N terminal domain BOC52_18830 PF13462 Thioredoxin BOC52_18835 PF00106 short chain dehydrogenase BOC52_18855 PF02803 Thiolase, C-terminal domain BOC52_18855 PF00108 Thiolase, N-terminal domain BOC52_18860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_18880 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BOC52_18885 PF00484 Carbonic anhydrase BOC52_18890 PF02803 Thiolase, C-terminal domain BOC52_18890 PF00108 Thiolase, N-terminal domain BOC52_18910 PF00202 Aminotransferase class-III BOC52_18915 PF00155 Aminotransferase class I and II BOC52_18925 PF04055 Radical SAM superfamily BOC52_18925 PF06968 Biotin and Thiamin Synthesis associated domain BOC52_18945 PF00245 Alkaline phosphatase BOC52_18950 PF00245 Alkaline phosphatase BOC52_18960 PF05231 MASE1 BOC52_18960 PF00563 EAL domain BOC52_18965 PF00999 Sodium/hydrogen exchanger family BOC52_18980 PF07885 Ion channel BOC52_18980 PF17655 Inward rectifier potassium channel C-terminal domain BOC52_19030 PF13340 Putative transposase of IS4/5 family (DUF4096) BOC52_19040 PF00701 Dihydrodipicolinate synthetase family BOC52_19060 PF02630 SCO1/SenC BOC52_19085 PF01037 Lrp/AsnC ligand binding domain BOC52_19095 PF05506 Domain of unknown function (DUF756) BOC52_19095 PF04185 Phosphoesterase family BOC52_19115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_19120 PF00682 HMGL-like BOC52_19140 PF13404 AsnC-type helix-turn-helix domain BOC52_19140 PF01037 Lrp/AsnC ligand binding domain BOC52_19145 PF00561 alpha/beta hydrolase fold BOC52_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_19160 PF03466 LysR substrate binding domain BOC52_19165 PF13609 Gram-negative porin BOC52_19175 PF13593 SBF-like CPA transporter family (DUF4137) BOC52_19185 PF02203 Tar ligand binding domain homologue BOC52_19185 PF00672 HAMP domain BOC52_19185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_19190 PF00356 Bacterial regulatory proteins, lacI family BOC52_19200 PF00294 pfkB family carbohydrate kinase BOC52_19230 PF01171 PP-loop family BOC52_19245 PF12804 MobA-like NTP transferase domain BOC52_19245 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_19250 PF01380 SIS domain BOC52_19265 PF00873 AcrB/AcrD/AcrF family BOC52_19270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_19270 PF00529 HlyD membrane-fusion protein of T1SS BOC52_19290 PF04536 TPM domain BOC52_19295 PF04011 LemA family BOC52_19305 PF04945 YHS domain BOC52_19335 PF00764 Arginosuccinate synthase BOC52_19345 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_19345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BOC52_19420 PF13609 Gram-negative porin BOC52_19435 PF08274 PhnA Zinc-Ribbon BOC52_19435 PF03831 PhnA domain BOC52_19460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_19460 PF03466 LysR substrate binding domain BOC52_19470 PF00860 Permease family BOC52_19480 PF00669 Bacterial flagellin N-terminal helical region BOC52_19485 PF00460 Flagella basal body rod protein BOC52_19485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BOC52_19490 PF07238 PilZ domain BOC52_19490 PF07317 Flagellar regulator YcgR BOC52_19495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BOC52_19495 PF10135 Rod binding protein BOC52_19500 PF02119 Flagellar P-ring protein BOC52_19505 PF02107 Flagellar L-ring protein BOC52_19510 PF00460 Flagella basal body rod protein BOC52_19510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BOC52_19515 PF00460 Flagella basal body rod protein BOC52_19515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BOC52_19520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BOC52_19520 PF07559 Flagellar basal body protein FlaE BOC52_19520 PF00460 Flagella basal body rod protein BOC52_19525 PF13861 FlgD Tudor-like domain BOC52_19525 PF03963 Flagellar hook capping protein - N-terminal region BOC52_19525 PF13860 FlgD Ig-like domain BOC52_19530 PF00460 Flagella basal body rod protein BOC52_19530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BOC52_19535 PF00460 Flagella basal body rod protein BOC52_19540 PF13144 Chaperone for flagella basal body P-ring formation BOC52_19540 PF17656 FlgA N-terminal domain BOC52_19545 PF04316 Anti-sigma-28 factor, FlgM BOC52_19570 PF01966 HD domain BOC52_19570 PF01743 Poly A polymerase head domain BOC52_19570 PF12627 Probable RNA and SrmB- binding site of polymerase A BOC52_19585 PF01464 Transglycosylase SLT domain BOC52_19585 PF14718 Soluble lytic murein transglycosylase L domain BOC52_19590 PF01812 5-formyltetrahydrofolate cyclo-ligase family BOC52_19600 PF02682 Carboxyltransferase domain, subdomain C and D BOC52_19605 PF02626 Carboxyltransferase domain, subdomain A and B BOC52_19610 PF03746 LamB/YcsF family BOC52_19640 PF00005 ABC transporter BOC52_19640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_19645 PF00005 ABC transporter BOC52_19645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_19650 PF12911 N-terminal TM domain of oligopeptide transport permease C BOC52_19650 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_19655 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_19660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_19670 PF07690 Major Facilitator Superfamily BOC52_19675 PF01355 High potential iron-sulfur protein BOC52_19680 PF01266 FAD dependent oxidoreductase BOC52_19685 PF05362 Lon protease (S16) C-terminal proteolytic domain BOC52_19685 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_19700 PF03372 Endonuclease/Exonuclease/phosphatase family BOC52_19705 PF01810 LysE type translocator BOC52_19710 PF00175 Oxidoreductase NAD-binding domain BOC52_19710 PF00970 Oxidoreductase FAD-binding domain BOC52_19720 PF00072 Response regulator receiver domain BOC52_19720 PF00196 Bacterial regulatory proteins, luxR family BOC52_19725 PF13520 Amino acid permease BOC52_19740 PF01312 FlhB HrpN YscU SpaS Family BOC52_19755 PF02561 Flagellar protein FliS BOC52_19760 PF02049 Flagellar hook-basal body complex protein FliE BOC52_19765 PF01514 Secretory protein of YscJ/FliF family BOC52_19765 PF08345 Flagellar M-ring protein C-terminal BOC52_19770 PF14841 FliG middle domain BOC52_19770 PF14842 FliG N-terminal domain BOC52_19770 PF01706 FliG C-terminal domain BOC52_19775 PF02108 Flagellar assembly protein FliH BOC52_19795 PF05199 GMC oxidoreductase BOC52_19795 PF00732 GMC oxidoreductase BOC52_19800 PF18158 Adaptive response protein AidB N-terminal domain BOC52_19800 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_19800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_19805 PF00171 Aldehyde dehydrogenase family BOC52_19815 PF01636 Phosphotransferase enzyme family BOC52_19825 PF07690 Major Facilitator Superfamily BOC52_19835 PF00892 EamA-like transporter family BOC52_19845 PF00248 Aldo/keto reductase family BOC52_19870 PF02772 S-adenosylmethionine synthetase, central domain BOC52_19870 PF02773 S-adenosylmethionine synthetase, C-terminal domain BOC52_19870 PF00438 S-adenosylmethionine synthetase, N-terminal domain BOC52_19875 PF03279 Bacterial lipid A biosynthesis acyltransferase BOC52_19880 PF01678 Diaminopimelate epimerase BOC52_19890 PF00589 Phage integrase family BOC52_19890 PF02899 Phage integrase, N-terminal SAM-like domain BOC52_19895 PF10672 S-adenosylmethionine-dependent methyltransferase BOC52_19895 PF17785 PUA-like domain BOC52_19900 PF07683 Cobalamin synthesis protein cobW C-terminal domain BOC52_19900 PF02492 CobW/HypB/UreG, nucleotide-binding domain BOC52_19910 PF01258 Prokaryotic dksA/traR C4-type zinc finger BOC52_19920 PF00227 Proteasome subunit BOC52_19925 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_19925 PF07724 AAA domain (Cdc48 subfamily) BOC52_19930 PF00072 Response regulator receiver domain BOC52_19935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_19935 PF00512 His Kinase A (phospho-acceptor) domain BOC52_19945 PF00696 Amino acid kinase family BOC52_19955 PF00440 Bacterial regulatory proteins, tetR family BOC52_19960 PF00561 alpha/beta hydrolase fold BOC52_19970 PF07690 Major Facilitator Superfamily BOC52_19980 PF12833 Helix-turn-helix domain BOC52_19980 PF06719 AraC-type transcriptional regulator N-terminus BOC52_19985 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_19985 PF00107 Zinc-binding dehydrogenase BOC52_19995 PF03372 Endonuclease/Exonuclease/phosphatase family BOC52_20000 PF03976 Polyphosphate kinase 2 (PPK2) BOC52_20005 PF02637 GatB domain BOC52_20005 PF02934 GatB/GatE catalytic domain BOC52_20010 PF01425 Amidase BOC52_20015 PF02686 Glu-tRNAGln amidotransferase C subunit BOC52_20035 PF03717 Penicillin-binding Protein dimerisation domain BOC52_20035 PF00905 Penicillin binding protein transpeptidase domain BOC52_20040 PF01098 Cell cycle protein BOC52_20055 PF03328 HpcH/HpaI aldolase/citrate lyase family BOC52_20065 PF01242 6-pyruvoyl tetrahydropterin synthase BOC52_20075 PF06508 Queuosine biosynthesis protein QueC BOC52_20090 PF01695 IstB-like ATP binding protein BOC52_20095 PF00665 Integrase core domain BOC52_20185 PF01555 DNA methylase BOC52_20350 PF00072 Response regulator receiver domain BOC52_20350 PF02954 Bacterial regulatory protein, Fis family BOC52_20350 PF00158 Sigma-54 interaction domain BOC52_20355 PF00672 HAMP domain BOC52_20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_20355 PF00512 His Kinase A (phospho-acceptor) domain BOC52_20355 PF00989 PAS fold BOC52_20365 PF01189 16S rRNA methyltransferase RsmB/F BOC52_20365 PF01029 NusB family BOC52_20375 PF01435 Peptidase family M48 BOC52_20380 PF01810 LysE type translocator BOC52_20385 PF02911 Formyl transferase, C-terminal domain BOC52_20385 PF00551 Formyl transferase BOC52_20390 PF01327 Polypeptide deformylase BOC52_20395 PF02481 DNA recombination-mediator protein A BOC52_20395 PF17782 DprA winged helix domain BOC52_20405 PF01751 Toprim domain BOC52_20405 PF01131 DNA topoisomerase BOC52_20410 PF03466 LysR substrate binding domain BOC52_20410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_20415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_20415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BOC52_20445 PF00589 Phage integrase family BOC52_20445 PF02899 Phage integrase, N-terminal SAM-like domain BOC52_20450 PF07929 Plasmid pRiA4b ORF-3-like protein BOC52_20455 PF13005 zinc-finger binding domain of transposase IS66 BOC52_20455 PF13007 Transposase C of IS166 homeodomain BOC52_20455 PF13817 IS66 C-terminal element BOC52_20455 PF03050 Transposase IS66 family BOC52_20460 PF05717 IS66 Orf2 like protein BOC52_20495 PF03466 LysR substrate binding domain BOC52_20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_20525 PF00140 Sigma-70 factor, region 1.2 BOC52_20525 PF04546 Sigma-70, non-essential region BOC52_20525 PF04545 Sigma-70, region 4 BOC52_20525 PF04539 Sigma-70 region 3 BOC52_20525 PF04542 Sigma-70 region 2 BOC52_20525 PF03979 Sigma-70 factor, region 1.1 BOC52_20530 PF04262 Glutamate-cysteine ligase BOC52_20535 PF12833 Helix-turn-helix domain BOC52_20535 PF02805 Metal binding domain of Ada BOC52_20535 PF06029 AlkA N-terminal domain BOC52_20535 PF00730 HhH-GPD superfamily base excision DNA repair protein BOC52_20540 PF02805 Metal binding domain of Ada BOC52_20540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BOC52_20540 PF12833 Helix-turn-helix domain BOC52_20540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BOC52_20555 PF07152 YaeQ protein BOC52_20570 PF13302 Acetyltransferase (GNAT) domain BOC52_20595 PF00239 Resolvase, N terminal domain BOC52_20595 PF02796 Helix-turn-helix domain of resolvase BOC52_20650 PF08401 Domain of unknown function (DUF1738) BOC52_20650 PF18818 Metallopeptidase superfamily domain BOC52_20650 PF13362 Toprim domain BOC52_20655 PF00589 Phage integrase family BOC52_20655 PF13356 Arm DNA-binding domain BOC52_20660 PF10396 GTP-binding protein TrmE N-terminus BOC52_20660 PF01926 50S ribosome-binding GTPase BOC52_20660 PF12631 MnmE helical domain BOC52_20670 PF02096 60Kd inner membrane protein BOC52_20670 PF14849 YidC periplasmic domain BOC52_20675 PF01809 Putative membrane protein insertion efficiency factor BOC52_20680 PF00825 Ribonuclease P BOC52_20685 PF00468 Ribosomal protein L34 BOC52_20690 PF08299 Bacterial dnaA protein helix-turn-helix BOC52_20690 PF11638 DnaA N-terminal domain BOC52_20690 PF00308 Bacterial dnaA protein BOC52_20695 PF02767 DNA polymerase III beta subunit, central domain BOC52_20695 PF00712 DNA polymerase III beta subunit, N-terminal domain BOC52_20695 PF02768 DNA polymerase III beta subunit, C-terminal domain BOC52_20705 PF18053 DNA gyrase B subunit insert domain BOC52_20705 PF01751 Toprim domain BOC52_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_20705 PF00204 DNA gyrase B BOC52_20705 PF00986 DNA gyrase B subunit, carboxyl terminus BOC52_20710 PF00665 Integrase core domain BOC52_20715 PF01695 IstB-like ATP binding protein BOC52_20735 PF02195 ParB-like nuclease domain BOC52_20760 PF00199 Catalase BOC52_20765 PF08281 Sigma-70, region 4 BOC52_20765 PF04542 Sigma-70 region 2 BOC52_20805 PF02515 CoA-transferase family III BOC52_20810 PF00378 Enoyl-CoA hydratase/isomerase BOC52_20810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BOC52_20810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BOC52_20815 PF02803 Thiolase, C-terminal domain BOC52_20815 PF00108 Thiolase, N-terminal domain BOC52_20825 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_20825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_20825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_20855 PF03551 Transcriptional regulator PadR-like family BOC52_20865 PF00732 GMC oxidoreductase BOC52_20865 PF05199 GMC oxidoreductase BOC52_20875 PF17409 MoaF C-terminal domain BOC52_20875 PF10703 MoaF N-terminal domain BOC52_20885 PF00171 Aldehyde dehydrogenase family BOC52_20900 PF11862 Domain of unknown function (DUF3382) BOC52_20900 PF02653 Branched-chain amino acid transport system / permease component BOC52_20905 PF00005 ABC transporter BOC52_20905 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_20915 PF00005 ABC transporter BOC52_20930 PF13609 Gram-negative porin BOC52_20940 PF04851 Type III restriction enzyme, res subunit BOC52_20940 PF08774 VRR-NUC domain BOC52_20945 PF18273 Type III R-M EcoP15I C-terminal domain BOC52_20945 PF01555 DNA methylase BOC52_20955 PF13609 Gram-negative porin BOC52_20960 PF00072 Response regulator receiver domain BOC52_20960 PF00486 Transcriptional regulatory protein, C terminal BOC52_20965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_20965 PF00512 His Kinase A (phospho-acceptor) domain BOC52_20970 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_20975 PF00005 ABC transporter BOC52_20990 PF13649 Methyltransferase domain BOC52_20995 PF09278 MerR, DNA binding BOC52_20995 PF00376 MerR family regulatory protein BOC52_21000 PF01311 Bacterial export proteins, family 1 BOC52_21005 PF01313 Bacterial export proteins, family 3 BOC52_21010 PF00813 FliP family BOC52_21015 PF04347 Flagellar biosynthesis protein, FliO BOC52_21020 PF16973 Flagellar motor switch protein FliN N-terminal BOC52_21020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BOC52_21025 PF02154 Flagellar motor switch protein FliM BOC52_21025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BOC52_21040 PF04172 LrgB-like family BOC52_21045 PF03788 LrgA family BOC52_21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_21050 PF03466 LysR substrate binding domain BOC52_21055 PF07690 Major Facilitator Superfamily BOC52_21060 PF01047 MarR family BOC52_21070 PF02321 Outer membrane efflux protein BOC52_21090 PF03934 Type II secretion system (T2SS), protein K BOC52_21100 PF07963 Prokaryotic N-terminal methylation motif BOC52_21100 PF02501 Type II secretion system (T2SS), protein I BOC52_21105 PF07963 Prokaryotic N-terminal methylation motif BOC52_21105 PF12019 Type II transport protein GspH BOC52_21110 PF08334 Type II secretion system (T2SS), protein G BOC52_21110 PF07963 Prokaryotic N-terminal methylation motif BOC52_21120 PF00482 Type II secretion system (T2SS), protein F BOC52_21125 PF00437 Type II/IV secretion system protein BOC52_21130 PF00263 Bacterial type II and III secretion system protein BOC52_21130 PF03958 Bacterial type II/III secretion system short domain BOC52_21135 PF01464 Transglycosylase SLT domain BOC52_21145 PF07683 Cobalamin synthesis protein cobW C-terminal domain BOC52_21145 PF02492 CobW/HypB/UreG, nucleotide-binding domain BOC52_21150 PF00216 Bacterial DNA-binding protein BOC52_21155 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BOC52_21155 PF01266 FAD dependent oxidoreductase BOC52_21175 PF04107 Glutamate-cysteine ligase family 2(GCS2) BOC52_21190 PF00117 Glutamine amidotransferase class-I BOC52_21190 PF00958 GMP synthase C terminal domain BOC52_21190 PF02540 NAD synthase BOC52_21195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BOC52_21215 PF00512 His Kinase A (phospho-acceptor) domain BOC52_21215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_21215 PF08521 Two-component sensor kinase N-terminal BOC52_21220 PF00072 Response regulator receiver domain BOC52_21220 PF00486 Transcriptional regulatory protein, C terminal BOC52_21235 PF01329 Pterin 4 alpha carbinolamine dehydratase BOC52_21240 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BOC52_21245 PF01037 Lrp/AsnC ligand binding domain BOC52_21260 PF03466 LysR substrate binding domain BOC52_21260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_21265 PF00171 Aldehyde dehydrogenase family BOC52_21270 PF00732 GMC oxidoreductase BOC52_21270 PF05199 GMC oxidoreductase BOC52_21285 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_21285 PF00005 ABC transporter BOC52_21290 PF00005 ABC transporter BOC52_21300 PF02653 Branched-chain amino acid transport system / permease component BOC52_21325 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_21325 PF00005 ABC transporter BOC52_21330 PF00005 ABC transporter BOC52_21335 PF13932 GidA associated domain BOC52_21335 PF01134 Glucose inhibited division protein A BOC52_21340 PF02527 rRNA small subunit methyltransferase G BOC52_21345 PF13614 AAA domain BOC52_21350 PF02195 ParB-like nuclease domain BOC52_21350 PF17762 HTH domain found in ParB protein BOC52_21355 PF03600 Citrate transporter BOC52_21365 PF00119 ATP synthase A chain BOC52_21370 PF00137 ATP synthase subunit C BOC52_21375 PF00430 ATP synthase B/B' CF(0) BOC52_21380 PF00213 ATP synthase delta (OSCP) subunit BOC52_21385 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_21385 PF00306 ATP synthase alpha/beta chain, C terminal domain BOC52_21385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_21390 PF00231 ATP synthase BOC52_21395 PF02874 ATP synthase alpha/beta family, beta-barrel domain BOC52_21395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_21400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BOC52_21400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BOC52_21405 PF13193 AMP-binding enzyme C-terminal domain BOC52_21405 PF00501 AMP-binding enzyme BOC52_21420 PF13380 CoA binding domain BOC52_21425 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_21430 PF01208 Uroporphyrinogen decarboxylase (URO-D) BOC52_21440 PF17764 3′ DNA-binding domain (3′BD) BOC52_21440 PF00271 Helicase conserved C-terminal domain BOC52_21440 PF00270 DEAD/DEAH box helicase BOC52_21440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BOC52_21440 PF18074 Primosomal protein N C-terminal domain BOC52_21460 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BOC52_21460 PF14850 DNA-binding domain of Proline dehydrogenase BOC52_21460 PF01619 Proline dehydrogenase BOC52_21460 PF00171 Aldehyde dehydrogenase family BOC52_21465 PF13458 Periplasmic binding protein BOC52_21470 PF13193 AMP-binding enzyme C-terminal domain BOC52_21470 PF00501 AMP-binding enzyme BOC52_21480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_21480 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_21480 PF18158 Adaptive response protein AidB N-terminal domain BOC52_21500 PF00155 Aminotransferase class I and II BOC52_21505 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_21515 PF01565 FAD binding domain BOC52_21515 PF02913 FAD linked oxidases, C-terminal domain BOC52_21525 PF13411 MerR HTH family regulatory protein BOC52_21530 PF00403 Heavy-metal-associated domain BOC52_21550 PF05552 Conserved TM helix BOC52_21570 PF13520 Amino acid permease BOC52_21575 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BOC52_21580 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BOC52_21590 PF00171 Aldehyde dehydrogenase family BOC52_21595 PF12833 Helix-turn-helix domain BOC52_21605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_21605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_21605 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_21615 PF03315 Serine dehydratase beta chain BOC52_21615 PF03313 Serine dehydratase alpha chain BOC52_21630 PF02347 Glycine cleavage system P-protein BOC52_21635 PF01597 Glycine cleavage H-protein BOC52_21640 PF01571 Aminomethyltransferase folate-binding domain BOC52_21640 PF08669 Glycine cleavage T-protein C-terminal barrel domain BOC52_21650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BOC52_21650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BOC52_21670 PF13361 UvrD-like helicase C-terminal domain BOC52_21670 PF00580 UvrD/REP helicase N-terminal domain BOC52_21675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BOC52_21695 PF00589 Phage integrase family BOC52_21740 PF18416 N-acetylglucosamine binding protein domain 2 BOC52_21740 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BOC52_21750 PF01565 FAD binding domain BOC52_21750 PF08031 Berberine and berberine like BOC52_21760 PF00672 HAMP domain BOC52_21760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_21760 PF02203 Tar ligand binding domain homologue BOC52_21765 PF00561 alpha/beta hydrolase fold BOC52_21780 PF03783 Curli production assembly/transport component CsgG BOC52_21790 PF05643 Putative bacterial lipoprotein (DUF799) BOC52_21800 PF04185 Phosphoesterase family BOC52_21830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BOC52_21830 PF00355 Rieske [2Fe-2S] domain BOC52_21845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BOC52_21845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BOC52_21855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BOC52_21855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BOC52_21860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BOC52_21880 PF00669 Bacterial flagellin N-terminal helical region BOC52_21880 PF00700 Bacterial flagellin C-terminal helical region BOC52_21890 PF01165 Ribosomal protein S21 BOC52_21900 PF03352 Methyladenine glycosylase BOC52_21900 PF00117 Glutamine amidotransferase class-I BOC52_21900 PF00958 GMP synthase C terminal domain BOC52_21900 PF13302 Acetyltransferase (GNAT) domain BOC52_21900 PF13673 Acetyltransferase (GNAT) domain BOC52_21915 PF00230 Major intrinsic protein BOC52_21930 PF13439 Glycosyltransferase Family 4 BOC52_21935 PF05247 Flagellar transcriptional activator (FlhD) BOC52_21940 PF05280 Flagellar transcriptional activator (FlhC) BOC52_21945 PF01618 MotA/TolQ/ExbB proton channel family BOC52_21950 PF00691 OmpA family BOC52_21950 PF13677 Membrane MotB of proton-channel complex MotA/MotB BOC52_21955 PF01339 CheB methylesterase BOC52_21955 PF00072 Response regulator receiver domain BOC52_21960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_21960 PF01627 Hpt domain BOC52_21960 PF01584 CheW-like domain BOC52_21960 PF02895 Signal transducing histidine kinase, homodimeric domain BOC52_21960 PF09078 CheY binding BOC52_21965 PF01584 CheW-like domain BOC52_21970 PF00672 HAMP domain BOC52_21970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_21970 PF02203 Tar ligand binding domain homologue BOC52_21975 PF03705 CheR methyltransferase, all-alpha domain BOC52_21975 PF01739 CheR methyltransferase, SAM binding domain BOC52_21980 PF03975 CheD chemotactic sensory transduction BOC52_21985 PF01339 CheB methylesterase BOC52_21985 PF00072 Response regulator receiver domain BOC52_21995 PF00072 Response regulator receiver domain BOC52_22000 PF04344 Chemotaxis phosphatase, CheZ BOC52_22020 PF01312 FlhB HrpN YscU SpaS Family BOC52_22025 PF00771 FHIPEP family BOC52_22030 PF00448 SRP54-type protein, GTPase domain BOC52_22030 PF00448 SRP54-type protein, GTPase domain BOC52_22040 PF04545 Sigma-70, region 4 BOC52_22040 PF04542 Sigma-70 region 2 BOC52_22040 PF04539 Sigma-70 region 3 BOC52_22045 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BOC52_22045 PF05221 S-adenosyl-L-homocysteine hydrolase BOC52_22050 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BOC52_22055 PF02219 Methylenetetrahydrofolate reductase BOC52_22060 PF01425 Amidase BOC52_22065 PF01738 Dienelactone hydrolase family BOC52_22075 PF03060 Nitronate monooxygenase BOC52_22085 PF13458 Periplasmic binding protein BOC52_22090 PF07690 Major Facilitator Superfamily BOC52_22115 PF01037 Lrp/AsnC ligand binding domain BOC52_22125 PF00753 Metallo-beta-lactamase superfamily BOC52_22130 PF05036 Sporulation related domain BOC52_22130 PF03330 Lytic transglycolase BOC52_22135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_22140 PF02021 Uncharacterised protein family UPF0102 BOC52_22145 PF13580 SIS domain BOC52_22150 PF04972 BON domain BOC52_22155 PF00034 Cytochrome c BOC52_22165 PF00324 Amino acid permease BOC52_22210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_22210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BOC52_22215 PF01810 LysE type translocator BOC52_22220 PF07690 Major Facilitator Superfamily BOC52_22225 PF03466 LysR substrate binding domain BOC52_22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_22230 PF01610 Transposase BOC52_22230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BOC52_22230 PF13542 Helix-turn-helix domain of transposase family ISL3 BOC52_22235 PF03922 OmpW family BOC52_22255 PF01118 Semialdehyde dehydrogenase, NAD binding domain BOC52_22260 PF03358 NADPH-dependent FMN reductase BOC52_22270 PF01161 Phosphatidylethanolamine-binding protein BOC52_22275 PF00156 Phosphoribosyl transferase domain BOC52_22305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BOC52_22310 PF13404 AsnC-type helix-turn-helix domain BOC52_22310 PF01037 Lrp/AsnC ligand binding domain BOC52_22320 PF17932 Tetracyclin repressor-like, C-terminal domain BOC52_22320 PF00440 Bacterial regulatory proteins, tetR family BOC52_22330 PF00970 Oxidoreductase FAD-binding domain BOC52_22330 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_22330 PF00175 Oxidoreductase NAD-binding domain BOC52_22335 PF01883 Iron-sulfur cluster assembly protein BOC52_22340 PF05138 Phenylacetic acid catabolic protein BOC52_22345 PF06243 Phenylacetic acid degradation B BOC52_22350 PF05138 Phenylacetic acid catabolic protein BOC52_22395 PF01527 Transposase BOC52_22400 PF13683 Integrase core domain BOC52_22400 PF13276 HTH-like domain BOC52_22420 PF00009 Elongation factor Tu GTP binding domain BOC52_22420 PF03143 Elongation factor Tu C-terminal domain BOC52_22420 PF03144 Elongation factor Tu domain 2 BOC52_22430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BOC52_22435 PF02357 Transcription termination factor nusG BOC52_22435 PF00467 KOW motif BOC52_22440 PF00298 Ribosomal protein L11, RNA binding domain BOC52_22440 PF03946 Ribosomal protein L11, N-terminal domain BOC52_22445 PF00687 Ribosomal protein L1p/L10e family BOC52_22450 PF00466 Ribosomal protein L10 BOC52_22455 PF00542 Ribosomal protein L7/L12 C-terminal domain BOC52_22455 PF16320 Ribosomal protein L7/L12 dimerisation domain BOC52_22460 PF10385 RNA polymerase beta subunit external 1 domain BOC52_22460 PF04565 RNA polymerase Rpb2, domain 3 BOC52_22460 PF04561 RNA polymerase Rpb2, domain 2 BOC52_22460 PF00562 RNA polymerase Rpb2, domain 6 BOC52_22460 PF04563 RNA polymerase beta subunit BOC52_22460 PF04560 RNA polymerase Rpb2, domain 7 BOC52_22465 PF04983 RNA polymerase Rpb1, domain 3 BOC52_22465 PF00623 RNA polymerase Rpb1, domain 2 BOC52_22465 PF04997 RNA polymerase Rpb1, domain 1 BOC52_22465 PF04998 RNA polymerase Rpb1, domain 5 BOC52_22465 PF05000 RNA polymerase Rpb1, domain 4 BOC52_22470 PF00271 Helicase conserved C-terminal domain BOC52_22470 PF00570 HRDC domain BOC52_22470 PF16124 RecQ zinc-binding BOC52_22470 PF09382 RQC domain BOC52_22470 PF00270 DEAD/DEAH box helicase BOC52_22480 PF00164 Ribosomal protein S12/S23 BOC52_22485 PF00177 Ribosomal protein S7p/S5e BOC52_22490 PF14492 Elongation Factor G, domain II BOC52_22490 PF03144 Elongation factor Tu domain 2 BOC52_22490 PF00679 Elongation factor G C-terminus BOC52_22490 PF00009 Elongation factor Tu GTP binding domain BOC52_22490 PF03764 Elongation factor G, domain IV BOC52_22495 PF00009 Elongation factor Tu GTP binding domain BOC52_22495 PF03143 Elongation factor Tu C-terminal domain BOC52_22495 PF03144 Elongation factor Tu domain 2 BOC52_22500 PF00338 Ribosomal protein S10p/S20e BOC52_22505 PF00297 Ribosomal protein L3 BOC52_22510 PF00573 Ribosomal protein L4/L1 family BOC52_22515 PF00276 Ribosomal protein L23 BOC52_22520 PF00181 Ribosomal Proteins L2, RNA binding domain BOC52_22520 PF03947 Ribosomal Proteins L2, C-terminal domain BOC52_22525 PF00203 Ribosomal protein S19 BOC52_22530 PF00237 Ribosomal protein L22p/L17e BOC52_22535 PF00189 Ribosomal protein S3, C-terminal domain BOC52_22535 PF07650 KH domain BOC52_22540 PF00252 Ribosomal protein L16p/L10e BOC52_22545 PF00831 Ribosomal L29 protein BOC52_22550 PF00366 Ribosomal protein S17 BOC52_22555 PF00238 Ribosomal protein L14p/L23e BOC52_22560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BOC52_22565 PF00673 ribosomal L5P family C-terminus BOC52_22565 PF00281 Ribosomal protein L5 BOC52_22570 PF00253 Ribosomal protein S14p/S29e BOC52_22575 PF00410 Ribosomal protein S8 BOC52_22580 PF00347 Ribosomal protein L6 BOC52_22585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BOC52_22590 PF00333 Ribosomal protein S5, N-terminal domain BOC52_22590 PF03719 Ribosomal protein S5, C-terminal domain BOC52_22595 PF00327 Ribosomal protein L30p/L7e BOC52_22600 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BOC52_22605 PF00344 SecY translocase BOC52_22610 PF01176 Translation initiation factor 1A / IF-1 BOC52_22615 PF00444 Ribosomal protein L36 BOC52_22620 PF00416 Ribosomal protein S13/S18 BOC52_22625 PF00411 Ribosomal protein S11 BOC52_22630 PF00163 Ribosomal protein S4/S9 N-terminal domain BOC52_22630 PF01479 S4 domain BOC52_22635 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BOC52_22635 PF01000 RNA polymerase Rpb3/RpoA insert domain BOC52_22635 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BOC52_22640 PF01196 Ribosomal protein L17 BOC52_22650 PF02683 Cytochrome C biogenesis protein transmembrane region BOC52_22650 PF11412 Disulphide bond corrector protein DsbC BOC52_22655 PF00490 Delta-aminolevulinic acid dehydratase BOC52_22660 PF01926 50S ribosome-binding GTPase BOC52_22665 PF00034 Cytochrome c BOC52_22670 PF05140 ResB-like family BOC52_22675 PF01578 Cytochrome C assembly protein BOC52_22680 PF00174 Oxidoreductase molybdopterin binding domain BOC52_22685 PF01794 Ferric reductase like transmembrane component BOC52_22695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BOC52_22695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BOC52_22705 PF01491 Frataxin-like domain BOC52_22710 PF17092 Penicillin-binding protein OB-like domain BOC52_22710 PF00912 Transglycosylase BOC52_22710 PF00905 Penicillin binding protein transpeptidase domain BOC52_22730 PF11741 AMIN domain BOC52_22730 PF00263 Bacterial type II and III secretion system protein BOC52_22730 PF03958 Bacterial type II/III secretion system short domain BOC52_22730 PF07660 Secretin and TonB N terminus short domain BOC52_22735 PF01202 Shikimate kinase BOC52_22740 PF01761 3-dehydroquinate synthase BOC52_22745 PF01966 HD domain BOC52_22745 PF13286 Phosphohydrolase-associated domain BOC52_22750 PF13416 Bacterial extracellular solute-binding protein BOC52_22755 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_22760 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_22765 PF00005 ABC transporter BOC52_22765 PF17912 MalK OB fold domain BOC52_22770 PF03009 Glycerophosphoryl diester phosphodiesterase family BOC52_22785 PF01493 GXGXG motif BOC52_22785 PF01645 Conserved region in glutamate synthase BOC52_22785 PF04898 Glutamate synthase central domain BOC52_22785 PF00310 Glutamine amidotransferases class-II BOC52_22790 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_22790 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BOC52_22795 PF01235 Sodium:alanine symporter family BOC52_22805 PF00005 ABC transporter BOC52_22805 PF06472 ABC transporter transmembrane region 2 BOC52_22810 PF01266 FAD dependent oxidoreductase BOC52_22820 PF05690 Thiazole biosynthesis protein ThiG BOC52_22825 PF02581 Thiamine monophosphate synthase BOC52_22830 PF00005 ABC transporter BOC52_22835 PF02405 Permease MlaE BOC52_22840 PF02470 MlaD protein BOC52_22865 PF00005 ABC transporter BOC52_22870 PF01061 ABC-2 type transporter BOC52_22880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BOC52_22885 PF01634 ATP phosphoribosyltransferase BOC52_22890 PF00815 Histidinol dehydrogenase BOC52_22895 PF00155 Aminotransferase class I and II BOC52_22900 PF00475 Imidazoleglycerol-phosphate dehydratase BOC52_22905 PF01914 MarC family integral membrane protein BOC52_22910 PF00117 Glutamine amidotransferase class-I BOC52_22915 PF00977 Histidine biosynthesis protein BOC52_22920 PF00977 Histidine biosynthesis protein BOC52_22925 PF01502 Phosphoribosyl-AMP cyclohydrolase BOC52_22930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BOC52_22945 PF02416 mttA/Hcf106 family BOC52_22950 PF02416 mttA/Hcf106 family BOC52_22955 PF00902 Sec-independent protein translocase protein (TatC) BOC52_22960 PF17820 PDZ domain BOC52_22960 PF13180 PDZ domain BOC52_22965 PF01784 NIF3 (NGG1p interacting factor 3) BOC52_22970 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BOC52_22970 PF00355 Rieske [2Fe-2S] domain BOC52_22975 PF00032 Cytochrome b(C-terminal)/b6/petD BOC52_22975 PF00033 Cytochrome b/b6/petB BOC52_22980 PF02167 Cytochrome C1 family BOC52_22985 PF00043 Glutathione S-transferase, C-terminal domain BOC52_22985 PF02798 Glutathione S-transferase, N-terminal domain BOC52_22990 PF04386 Stringent starvation protein B BOC52_23085 PF07724 AAA domain (Cdc48 subfamily) BOC52_23085 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_23085 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_23085 PF17871 AAA lid domain BOC52_23095 PF00691 OmpA family BOC52_23135 PF03412 Peptidase C39 family BOC52_23135 PF00005 ABC transporter BOC52_23135 PF00664 ABC transporter transmembrane region BOC52_23140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_23140 PF00529 HlyD membrane-fusion protein of T1SS BOC52_23175 PF11838 ERAP1-like C-terminal domain BOC52_23175 PF01433 Peptidase family M1 domain BOC52_23250 PF00012 Hsp70 protein BOC52_23260 PF00313 'Cold-shock' DNA-binding domain BOC52_23265 PF13520 Amino acid permease BOC52_23270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BOC52_23275 PF02441 Flavoprotein BOC52_23280 PF00462 Glutaredoxin BOC52_23285 PF05175 Methyltransferase small domain BOC52_23285 PF17827 PrmC N-terminal domain BOC52_23290 PF03462 PCRF domain BOC52_23290 PF00472 RF-1 domain BOC52_23295 PF01488 Shikimate / quinate 5-dehydrogenase BOC52_23295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BOC52_23295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BOC52_23315 PF01321 Creatinase/Prolidase N-terminal domain BOC52_23315 PF00557 Metallopeptidase family M24 BOC52_23320 PF00857 Isochorismatase family BOC52_23330 PF00005 ABC transporter BOC52_23330 PF12848 ABC transporter BOC52_23345 PF03009 Glycerophosphoryl diester phosphodiesterase family BOC52_23365 PF00324 Amino acid permease BOC52_23375 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BOC52_23385 PF01926 50S ribosome-binding GTPase BOC52_23385 PF06071 Protein of unknown function (DUF933) BOC52_23400 PF00665 Integrase core domain BOC52_23405 PF01695 IstB-like ATP binding protein BOC52_23440 PF01494 FAD binding domain BOC52_23445 PF13098 Thioredoxin-like domain BOC52_23445 PF10411 Disulfide bond isomerase protein N-terminus BOC52_23455 PF02525 Flavodoxin-like fold BOC52_23460 PF03167 Uracil DNA glycosylase superfamily BOC52_23470 PF00218 Indole-3-glycerol phosphate synthase BOC52_23475 PF00591 Glycosyl transferase family, a/b domain BOC52_23475 PF02885 Glycosyl transferase family, helical bundle domain BOC52_23480 PF00117 Glutamine amidotransferase class-I BOC52_23495 PF13419 Haloacid dehalogenase-like hydrolase BOC52_23510 PF04379 ApaG domain BOC52_23515 PF06725 3D domain BOC52_23515 PF03562 MltA specific insert domain BOC52_23525 PF03061 Thioesterase superfamily BOC52_23530 PF00378 Enoyl-CoA hydratase/isomerase BOC52_23535 PF02803 Thiolase, C-terminal domain BOC52_23535 PF00108 Thiolase, N-terminal domain BOC52_23545 PF00378 Enoyl-CoA hydratase/isomerase BOC52_23585 PF00384 Molybdopterin oxidoreductase BOC52_23585 PF01568 Molydopterin dinucleotide binding domain BOC52_23585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_23590 PF00501 AMP-binding enzyme BOC52_23590 PF13193 AMP-binding enzyme C-terminal domain BOC52_23595 PF13609 Gram-negative porin BOC52_23600 PF03232 Ubiquinone biosynthesis protein COQ7 BOC52_23605 PF02381 MraZ protein, putative antitoxin-like BOC52_23610 PF01795 MraW methylase family BOC52_23615 PF04999 Cell division protein FtsL BOC52_23620 PF03717 Penicillin-binding Protein dimerisation domain BOC52_23620 PF00905 Penicillin binding protein transpeptidase domain BOC52_23625 PF02875 Mur ligase family, glutamate ligase domain BOC52_23625 PF08245 Mur ligase middle domain BOC52_23630 PF01225 Mur ligase family, catalytic domain BOC52_23630 PF08245 Mur ligase middle domain BOC52_23630 PF02875 Mur ligase family, glutamate ligase domain BOC52_23635 PF00953 Glycosyl transferase family 4 BOC52_23635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BOC52_23640 PF02875 Mur ligase family, glutamate ligase domain BOC52_23640 PF08245 Mur ligase middle domain BOC52_23645 PF01098 Cell cycle protein BOC52_23650 PF03033 Glycosyltransferase family 28 N-terminal domain BOC52_23650 PF04101 Glycosyltransferase family 28 C-terminal domain BOC52_23655 PF02875 Mur ligase family, glutamate ligase domain BOC52_23655 PF08245 Mur ligase middle domain BOC52_23655 PF01225 Mur ligase family, catalytic domain BOC52_23660 PF01820 D-ala D-ala ligase N-terminus BOC52_23660 PF07478 D-ala D-ala ligase C-terminus BOC52_23665 PF08478 POTRA domain, FtsQ-type BOC52_23665 PF03799 Cell division protein FtsQ BOC52_23670 PF02491 SHS2 domain inserted in FTSA BOC52_23675 PF12327 FtsZ family, C-terminal domain BOC52_23675 PF00091 Tubulin/FtsZ family, GTPase domain BOC52_23680 PF08534 Redoxin BOC52_23690 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BOC52_23705 PF02810 SEC-C motif BOC52_23705 PF01043 SecA preprotein cross-linking domain BOC52_23705 PF07516 SecA Wing and Scaffold domain BOC52_23705 PF07517 SecA DEAD-like domain BOC52_23710 PF01960 ArgJ family BOC52_23720 PF00293 NUDIX domain BOC52_23725 PF03884 DNA gyrase inhibitor YacG BOC52_23730 PF07072 Cell division protein BOC52_23735 PF01121 Dephospho-CoA kinase BOC52_23740 PF01478 Type IV leader peptidase family BOC52_23740 PF06750 Bacterial Peptidase A24 N-terminal domain BOC52_23745 PF00482 Type II secretion system (T2SS), protein F BOC52_23750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BOC52_23750 PF00437 Type II/IV secretion system protein BOC52_23755 PF01595 Cyclin M transmembrane N-terminal domain BOC52_23755 PF03471 Transporter associated domain BOC52_23755 PF00571 CBS domain BOC52_23765 PF00348 Polyprenyl synthetase BOC52_23770 PF00829 Ribosomal prokaryotic L21 protein BOC52_23775 PF01016 Ribosomal L27 protein BOC52_23780 PF01926 50S ribosome-binding GTPase BOC52_23780 PF01018 GTP1/OBG BOC52_23785 PF00696 Amino acid kinase family BOC52_23785 PF01472 PUA domain BOC52_23795 PF00293 NUDIX domain BOC52_23805 PF04073 Aminoacyl-tRNA editing domain BOC52_23805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BOC52_23805 PF03129 Anticodon binding domain BOC52_23810 PF01914 MarC family integral membrane protein BOC52_23820 PF02881 SRP54-type protein, helical bundle domain BOC52_23820 PF02978 Signal peptide binding domain BOC52_23820 PF00448 SRP54-type protein, GTPase domain BOC52_23825 PF01578 Cytochrome C assembly protein BOC52_23835 PF01510 N-acetylmuramoyl-L-alanine amidase BOC52_23845 PF03477 ATP cone domain BOC52_23845 PF02867 Ribonucleotide reductase, barrel domain BOC52_23845 PF00317 Ribonucleotide reductase, all-alpha domain BOC52_23855 PF00268 Ribonucleotide reductase, small chain BOC52_23875 PF00294 pfkB family carbohydrate kinase BOC52_23880 PF08534 Redoxin BOC52_23895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BOC52_23895 PF00289 Biotin carboxylase, N-terminal domain BOC52_23895 PF02785 Biotin carboxylase C-terminal domain BOC52_23900 PF00364 Biotin-requiring enzyme BOC52_23905 PF01220 Dehydroquinase class II BOC52_23910 PF00578 AhpC/TSA family BOC52_23920 PF08245 Mur ligase middle domain BOC52_23920 PF02875 Mur ligase family, glutamate ligase domain BOC52_23920 PF01225 Mur ligase family, catalytic domain BOC52_23925 PF05728 Uncharacterised protein family (UPF0227) BOC52_23930 PF00773 RNB domain BOC52_23940 PF00912 Transglycosylase BOC52_23960 PF01614 Bacterial transcriptional regulator BOC52_23960 PF09339 IclR helix-turn-helix domain BOC52_23965 PF05035 2-keto-3-deoxy-galactonokinase BOC52_23980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BOC52_23985 PF00005 ABC transporter BOC52_23990 PF02653 Branched-chain amino acid transport system / permease component BOC52_24005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BOC52_24010 PF02464 Competence-damaged protein BOC52_24015 PF04608 Phosphatidylglycerophosphatase A BOC52_24020 PF00586 AIR synthase related protein, N-terminal domain BOC52_24020 PF02769 AIR synthase related protein, C-terminal domain BOC52_24025 PF00390 Malic enzyme, N-terminal domain BOC52_24025 PF01515 Phosphate acetyl/butaryl transferase BOC52_24025 PF03949 Malic enzyme, NAD binding domain BOC52_24045 PF04452 RNA methyltransferase BOC52_24055 PF17284 Spermidine synthase tetramerisation domain BOC52_24060 PF02780 Transketolase, C-terminal domain BOC52_24060 PF00456 Transketolase, thiamine diphosphate binding domain BOC52_24060 PF02779 Transketolase, pyrimidine binding domain BOC52_24065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BOC52_24065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BOC52_24075 PF07690 Major Facilitator Superfamily BOC52_24080 PF02560 Cyanate lyase C-terminal domain BOC52_24085 PF00484 Carbonic anhydrase BOC52_24090 PF03466 LysR substrate binding domain BOC52_24090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_24100 PF00392 Bacterial regulatory proteins, gntR family BOC52_24100 PF07729 FCD domain BOC52_24105 PF00375 Sodium:dicarboxylate symporter family BOC52_24110 PF03561 Allantoicase repeat BOC52_24115 PF04115 Ureidoglycolate lyase BOC52_24120 PF01475 Ferric uptake regulator family BOC52_24125 PF04355 SmpA / OmlA family BOC52_24130 PF05173 Dihydrodipicolinate reductase, C-terminus BOC52_24130 PF01113 Dihydrodipicolinate reductase, N-terminus BOC52_24135 PF01618 MotA/TolQ/ExbB proton channel family BOC52_24140 PF02472 Biopolymer transport protein ExbD/TolR BOC52_24145 PF09334 tRNA synthetases class I (M) BOC52_24145 PF13603 Leucyl-tRNA synthetase, Domain 2 BOC52_24145 PF00133 tRNA synthetases class I (I, L, M and V) BOC52_24145 PF08264 Anticodon-binding domain of tRNA BOC52_24155 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BOC52_24155 PF06144 DNA polymerase III, delta subunit BOC52_24160 PF00171 Aldehyde dehydrogenase family BOC52_24175 PF02685 Glucokinase BOC52_24175 PF01380 SIS domain BOC52_24175 PF01418 Helix-turn-helix domain, rpiR family BOC52_24185 PF00920 Dehydratase family BOC52_24190 PF01081 KDPG and KHG aldolase BOC52_24195 PF02447 GntP family permease BOC52_24205 PF00206 Lyase BOC52_24205 PF08328 Adenylosuccinate lyase C-terminal BOC52_24210 PF07690 Major Facilitator Superfamily BOC52_24215 PF03466 LysR substrate binding domain BOC52_24215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_24225 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BOC52_24225 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BOC52_24230 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_24235 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_24240 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_24245 PF00005 ABC transporter BOC52_24260 PF00166 Chaperonin 10 Kd subunit BOC52_24270 PF00011 Hsp20/alpha crystallin family BOC52_24275 PF00011 Hsp20/alpha crystallin family BOC52_24290 PF13230 Glutamine amidotransferases class-II BOC52_24300 PF01979 Amidohydrolase family BOC52_24320 PF00572 Ribosomal protein L13 BOC52_24325 PF00380 Ribosomal protein S9/S16 BOC52_24330 PF01521 Iron-sulphur cluster biosynthesis BOC52_24335 PF12833 Helix-turn-helix domain BOC52_24335 PF02311 AraC-like ligand binding domain BOC52_24340 PF02798 Glutathione S-transferase, N-terminal domain BOC52_24345 PF02798 Glutathione S-transferase, N-terminal domain BOC52_24345 PF00043 Glutathione S-transferase, C-terminal domain BOC52_24350 PF03702 Anhydro-N-acetylmuramic acid kinase BOC52_24360 PF01479 S4 domain BOC52_24360 PF00579 tRNA synthetases class I (W and Y) BOC52_24365 PF02580 D-Tyr-tRNA(Tyr) deacylase BOC52_24370 PF00300 Histidine phosphatase superfamily (branch 1) BOC52_24385 PF05491 RuvB C-terminal winged helix domain BOC52_24385 PF05496 Holliday junction DNA helicase RuvB P-loop domain BOC52_24385 PF17864 RuvB AAA lid domain BOC52_24390 PF01330 RuvA N terminal domain BOC52_24390 PF07499 RuvA, C-terminal domain BOC52_24395 PF02075 Crossover junction endodeoxyribonuclease RuvC BOC52_24405 PF01808 AICARFT/IMPCHase bienzyme BOC52_24405 PF02142 MGS-like domain BOC52_24410 PF02954 Bacterial regulatory protein, Fis family BOC52_24415 PF01207 Dihydrouridine synthase (Dus) BOC52_24420 PF01494 FAD binding domain BOC52_24425 PF05195 Aminopeptidase P, N-terminal domain BOC52_24425 PF00557 Metallopeptidase family M24 BOC52_24435 PF13417 Glutathione S-transferase, N-terminal domain BOC52_24435 PF00043 Glutathione S-transferase, C-terminal domain BOC52_24440 PF01645 Conserved region in glutamate synthase BOC52_24450 PF00293 NUDIX domain BOC52_24455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BOC52_24455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BOC52_24460 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BOC52_24465 PF02233 NAD(P) transhydrogenase beta subunit BOC52_24510 PF01170 Putative RNA methylase family UPF0020 BOC52_24510 PF02926 THUMP domain BOC52_24525 PF02470 MlaD protein BOC52_24530 PF04403 Paraquat-inducible protein A BOC52_24550 PF04264 YceI-like domain BOC52_24555 PF04264 YceI-like domain BOC52_24570 PF02355 Protein export membrane protein BOC52_24570 PF07549 SecD/SecF GG Motif BOC52_24575 PF02355 Protein export membrane protein BOC52_24575 PF13721 SecD export protein N-terminal TM region BOC52_24575 PF07549 SecD/SecF GG Motif BOC52_24580 PF02699 Preprotein translocase subunit BOC52_24590 PF01702 Queuine tRNA-ribosyltransferase BOC52_24600 PF02547 Queuosine biosynthesis protein BOC52_24605 PF17191 RecG wedge domain BOC52_24605 PF00270 DEAD/DEAH box helicase BOC52_24605 PF00271 Helicase conserved C-terminal domain BOC52_24610 PF03466 LysR substrate binding domain BOC52_24610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_24615 PF00141 Peroxidase BOC52_24625 PF00210 Ferritin-like domain BOC52_24635 PF01638 HxlR-like helix-turn-helix BOC52_24640 PF01040 UbiA prenyltransferase family BOC52_24650 PF06299 Protein of unknown function (DUF1045) BOC52_24655 PF07702 UTRA domain BOC52_24655 PF00392 Bacterial regulatory proteins, gntR family BOC52_24665 PF06754 Phosphonate metabolism protein PhnG BOC52_24675 PF05861 Bacterial phosphonate metabolism protein (PhnI) BOC52_24680 PF06007 Phosphonate metabolism protein PhnJ BOC52_24685 PF00005 ABC transporter BOC52_24690 PF00005 ABC transporter BOC52_24695 PF07969 Amidohydrolase family BOC52_24700 PF00005 ABC transporter BOC52_24710 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_24725 PF03807 NADP oxidoreductase coenzyme F420-dependent BOC52_24725 PF14748 Pyrroline-5-carboxylate reductase dimerisation BOC52_24730 PF01168 Alanine racemase, N-terminal domain BOC52_24735 PF02754 Cysteine-rich domain BOC52_24735 PF13183 4Fe-4S dicluster domain BOC52_24740 PF01565 FAD binding domain BOC52_24745 PF01565 FAD binding domain BOC52_24745 PF02913 FAD linked oxidases, C-terminal domain BOC52_24750 PF02913 FAD linked oxidases, C-terminal domain BOC52_24750 PF01565 FAD binding domain BOC52_24755 PF01923 Cobalamin adenosyltransferase BOC52_24760 PF00042 Globin BOC52_24760 PF00175 Oxidoreductase NAD-binding domain BOC52_24760 PF00970 Oxidoreductase FAD-binding domain BOC52_24770 PF00793 DAHP synthetase I family BOC52_24780 PF01523 Putative modulator of DNA gyrase BOC52_24785 PF00795 Carbon-nitrogen hydrolase BOC52_24790 PF13502 AsmA-like C-terminal region BOC52_24790 PF13116 Protein of unknown function BOC52_24795 PF03710 Glutamate-ammonia ligase adenylyltransferase BOC52_24795 PF08335 GlnD PII-uridylyltransferase BOC52_24800 PF02463 RecF/RecN/SMC N terminal domain BOC52_24805 PF01513 ATP-NAD kinase BOC52_24810 PF01628 HrcA protein C terminal domain BOC52_24810 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BOC52_24815 PF00762 Ferrochelatase BOC52_24820 PF01479 S4 domain BOC52_24825 PF01025 GrpE BOC52_24835 PF00012 Hsp70 protein BOC52_24840 PF00684 DnaJ central domain BOC52_24840 PF00226 DnaJ domain BOC52_24840 PF01556 DnaJ C terminal domain BOC52_24845 PF04715 Anthranilate synthase component I, N terminal region BOC52_24845 PF00425 chorismate binding enzyme BOC52_24850 PF02548 Ketopantoate hydroxymethyltransferase BOC52_24855 PF01712 Deoxynucleoside kinase BOC52_24860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BOC52_24865 PF01743 Poly A polymerase head domain BOC52_24865 PF12627 Probable RNA and SrmB- binding site of polymerase A BOC52_24865 PF12626 Polymerase A arginine-rich C-terminus BOC52_24875 PF00308 Bacterial dnaA protein BOC52_24885 PF00586 AIR synthase related protein, N-terminal domain BOC52_24885 PF02769 AIR synthase related protein, C-terminal domain BOC52_24900 PF01119 DNA mismatch repair protein, C-terminal domain BOC52_24900 PF08676 MutL C terminal dimerisation domain BOC52_24905 PF09335 SNARE associated Golgi protein BOC52_24910 PF00924 Mechanosensitive ion channel BOC52_24910 PF05552 Conserved TM helix BOC52_24920 PF01050 Mannose-6-phosphate isomerase BOC52_24920 PF00483 Nucleotidyl transferase BOC52_24940 PF02563 Polysaccharide biosynthesis/export protein BOC52_24950 PF01061 ABC-2 type transporter BOC52_24955 PF00005 ABC transporter BOC52_24990 PF16363 GDP-mannose 4,6 dehydratase BOC52_24995 PF00288 GHMP kinases N terminal domain BOC52_24995 PF08544 GHMP kinases C terminal BOC52_25000 PF13580 SIS domain BOC52_25005 PF00483 Nucleotidyl transferase BOC52_25015 PF05159 Capsule polysaccharide biosynthesis protein BOC52_25025 PF00884 Sulfatase BOC52_25030 PF00698 Acyl transferase domain BOC52_25030 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_25030 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_25030 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_25030 PF14765 Polyketide synthase dehydratase BOC52_25030 PF00550 Phosphopantetheine attachment site BOC52_25030 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_25030 PF08659 KR domain BOC52_25035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BOC52_25040 PF00155 Aminotransferase class I and II BOC52_25080 PF02311 AraC-like ligand binding domain BOC52_25080 PF12833 Helix-turn-helix domain BOC52_25085 PF02397 Bacterial sugar transferase BOC52_25090 PF02563 Polysaccharide biosynthesis/export protein BOC52_25090 PF10531 SLBB domain BOC52_25095 PF01451 Low molecular weight phosphotyrosine protein phosphatase BOC52_25100 PF02706 Chain length determinant protein BOC52_25100 PF13614 AAA domain BOC52_25100 PF13807 G-rich domain on putative tyrosine kinase BOC52_25110 PF05159 Capsule polysaccharide biosynthesis protein BOC52_25115 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_25125 PF00534 Glycosyl transferases group 1 BOC52_25125 PF13439 Glycosyltransferase Family 4 BOC52_25130 PF00793 DAHP synthetase I family BOC52_25140 PF00571 CBS domain BOC52_25140 PF01380 SIS domain BOC52_25145 PF00483 Nucleotidyl transferase BOC52_25170 PF00691 OmpA family BOC52_25175 PF04052 TolB amino-terminal domain BOC52_25175 PF07676 WD40-like Beta Propeller Repeat BOC52_25185 PF02472 Biopolymer transport protein ExbD/TolR BOC52_25190 PF01618 MotA/TolQ/ExbB proton channel family BOC52_25195 PF03061 Thioesterase superfamily BOC52_25200 PF00106 short chain dehydrogenase BOC52_25210 PF00464 Serine hydroxymethyltransferase BOC52_25215 PF03477 ATP cone domain BOC52_25260 PF00578 AhpC/TSA family BOC52_25260 PF10417 C-terminal domain of 1-Cys peroxiredoxin BOC52_25270 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_25270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_25270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_25300 PF01494 FAD binding domain BOC52_25310 PF07690 Major Facilitator Superfamily BOC52_25315 PF04209 homogentisate 1,2-dioxygenase BOC52_25340 PF07690 Major Facilitator Superfamily BOC52_25345 PF00881 Nitroreductase family BOC52_25350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BOC52_25350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_25355 PF03466 LysR substrate binding domain BOC52_25355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_25365 PF00266 Aminotransferase class-V BOC52_25375 PF00892 EamA-like transporter family BOC52_25385 PF07690 Major Facilitator Superfamily BOC52_25395 PF01799 [2Fe-2S] binding domain BOC52_25395 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_25400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BOC52_25400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BOC52_25415 PF07715 TonB-dependent Receptor Plug Domain BOC52_25415 PF00593 TonB dependent receptor BOC52_25420 PF00005 ABC transporter BOC52_25430 PF01032 FecCD transport family BOC52_25435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_25435 PF03466 LysR substrate binding domain BOC52_25455 PF10605 3HB-oligomer hydrolase (3HBOH) BOC52_25470 PF01925 Sulfite exporter TauE/SafE BOC52_25480 PF07690 Major Facilitator Superfamily BOC52_25485 PF03009 Glycerophosphoryl diester phosphodiesterase family BOC52_25490 PF01810 LysE type translocator BOC52_25550 PF00107 Zinc-binding dehydrogenase BOC52_25550 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_25555 PF01638 HxlR-like helix-turn-helix BOC52_25570 PF00166 Chaperonin 10 Kd subunit BOC52_25575 PF00118 TCP-1/cpn60 chaperonin family BOC52_25590 PF00301 Rubredoxin BOC52_25600 PF02622 Uncharacterized ACR, COG1678 BOC52_25605 PF03652 Holliday junction resolvase BOC52_25610 PF00156 Phosphoribosyl transferase domain BOC52_25615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BOC52_25615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BOC52_25620 PF01979 Amidohydrolase family BOC52_25630 PF00149 Calcineurin-like phosphoesterase BOC52_25635 PF16363 GDP-mannose 4,6 dehydratase BOC52_25640 PF00483 Nucleotidyl transferase BOC52_25645 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BOC52_25650 PF04321 RmlD substrate binding domain BOC52_25660 PF00005 ABC transporter BOC52_25670 PF01370 NAD dependent epimerase/dehydratase family BOC52_25685 PF00535 Glycosyl transferase family 2 BOC52_25695 PF01370 NAD dependent epimerase/dehydratase family BOC52_25700 PF00953 Glycosyl transferase family 4 BOC52_25705 PF02719 Polysaccharide biosynthesis protein BOC52_25715 PF16363 GDP-mannose 4,6 dehydratase BOC52_25720 PF13439 Glycosyltransferase Family 4 BOC52_25720 PF00534 Glycosyl transferases group 1 BOC52_25740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BOC52_25740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BOC52_25740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BOC52_25740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BOC52_25745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BOC52_25755 PF00534 Glycosyl transferases group 1 BOC52_25755 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BOC52_25760 PF02492 CobW/HypB/UreG, nucleotide-binding domain BOC52_25765 PF01730 UreF BOC52_25770 PF05194 UreE urease accessory protein, C-terminal domain BOC52_25770 PF02814 UreE urease accessory protein, N-terminal domain BOC52_25775 PF00449 Urease alpha-subunit, N-terminal domain BOC52_25775 PF01979 Amidohydrolase family BOC52_25780 PF00699 Urease beta subunit BOC52_25785 PF00547 Urease, gamma subunit BOC52_25790 PF01774 UreD urease accessory protein BOC52_25795 PF00005 ABC transporter BOC52_25800 PF00005 ABC transporter BOC52_25805 PF02653 Branched-chain amino acid transport system / permease component BOC52_25810 PF02653 Branched-chain amino acid transport system / permease component BOC52_25825 PF00202 Aminotransferase class-III BOC52_25830 PF00581 Rhodanese-like domain BOC52_25845 PF04055 Radical SAM superfamily BOC52_25845 PF06969 HemN C-terminal domain BOC52_25855 PF03692 Putative zinc- or iron-chelating domain BOC52_25865 PF02673 Bacitracin resistance protein BacA BOC52_25870 PF02390 Putative methyltransferase BOC52_25900 PF01381 Helix-turn-helix BOC52_25905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_25905 PF00512 His Kinase A (phospho-acceptor) domain BOC52_25905 PF00989 PAS fold BOC52_25910 PF00072 Response regulator receiver domain BOC52_25910 PF00196 Bacterial regulatory proteins, luxR family BOC52_25940 PF02146 Sir2 family BOC52_25945 PF08241 Methyltransferase domain BOC52_25950 PF09286 Pro-kumamolisin, activation domain BOC52_25950 PF00082 Subtilase family BOC52_25960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BOC52_25970 PF02325 YGGT family BOC52_25995 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_26010 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BOC52_26020 PF01464 Transglycosylase SLT domain BOC52_26030 PF00155 Aminotransferase class I and II BOC52_26035 PF01029 NusB family BOC52_26040 PF00885 6,7-dimethyl-8-ribityllumazine synthase BOC52_26045 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BOC52_26045 PF00925 GTP cyclohydrolase II BOC52_26055 PF00677 Lumazine binding domain BOC52_26060 PF01872 RibD C-terminal domain BOC52_26060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BOC52_26065 PF00202 Aminotransferase class-III BOC52_26085 PF07690 Major Facilitator Superfamily BOC52_26095 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_26100 PF00005 ABC transporter BOC52_26110 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_26120 PF01380 SIS domain BOC52_26120 PF01418 Helix-turn-helix domain, rpiR family BOC52_26120 PF02685 Glucokinase BOC52_26125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BOC52_26130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BOC52_26130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BOC52_26135 PF01547 Bacterial extracellular solute-binding protein BOC52_26145 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_26150 PF00005 ABC transporter BOC52_26150 PF17912 MalK OB fold domain BOC52_26155 PF03458 UPF0126 domain BOC52_26160 PF01713 Smr domain BOC52_26160 PF00488 MutS domain V BOC52_26165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_26175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BOC52_26175 PF17854 FtsK alpha domain BOC52_26175 PF01580 FtsK/SpoIIIE family BOC52_26175 PF09397 Ftsk gamma domain BOC52_26180 PF03548 Outer membrane lipoprotein carrier protein LolA BOC52_26190 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_26190 PF12002 MgsA AAA+ ATPase C terminal BOC52_26190 PF16193 AAA C-terminal domain BOC52_26200 PF02403 Seryl-tRNA synthetase N-terminal domain BOC52_26200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BOC52_26240 PF00665 Integrase core domain BOC52_26245 PF01695 IstB-like ATP binding protein BOC52_26315 PF04717 Type VI secretion system, phage-baseplate injector BOC52_26360 PF05717 IS66 Orf2 like protein BOC52_26365 PF03050 Transposase IS66 family BOC52_26365 PF13007 Transposase C of IS166 homeodomain BOC52_26365 PF13817 IS66 C-terminal element BOC52_26365 PF13005 zinc-finger binding domain of transposase IS66 BOC52_26370 PF07929 Plasmid pRiA4b ORF-3-like protein BOC52_26385 PF13356 Arm DNA-binding domain BOC52_26385 PF00589 Phage integrase family BOC52_26390 PF13276 HTH-like domain BOC52_26390 PF00665 Integrase core domain BOC52_26390 PF13333 Integrase core domain BOC52_26395 PF01527 Transposase BOC52_26415 PF03775 Septum formation inhibitor MinC, C-terminal domain BOC52_26415 PF05209 Septum formation inhibitor MinC, N-terminal domain BOC52_26420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BOC52_26425 PF03776 Septum formation topological specificity factor MinE BOC52_26435 PF00654 Voltage gated chloride channel BOC52_26440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BOC52_26450 PF07690 Major Facilitator Superfamily BOC52_26450 PF00083 Sugar (and other) transporter BOC52_26485 PF06969 HemN C-terminal domain BOC52_26485 PF04055 Radical SAM superfamily BOC52_26490 PF01725 Ham1 family BOC52_26495 PF03725 3' exoribonuclease family, domain 2 BOC52_26495 PF01138 3' exoribonuclease family, domain 1 BOC52_26500 PF03755 YicC-like family, N-terminal region BOC52_26500 PF08340 Domain of unknown function (DUF1732) BOC52_26505 PF00625 Guanylate kinase BOC52_26510 PF01192 RNA polymerase Rpb6 BOC52_26515 PF02824 TGS domain BOC52_26515 PF04607 Region found in RelA / SpoT proteins BOC52_26515 PF13291 ACT domain BOC52_26530 PF03449 Transcription elongation factor, N-terminal BOC52_26530 PF01272 Transcription elongation factor, GreA/GreB, C-term BOC52_26540 PF13609 Gram-negative porin BOC52_26550 PF00313 'Cold-shock' DNA-binding domain BOC52_26555 PF14579 Helix-hairpin-helix motif BOC52_26555 PF14480 DNA polymerase III polC-type N-terminus I BOC52_26555 PF11490 DNA polymerase III polC-type N-terminus II BOC52_26555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BOC52_26555 PF07733 Bacterial DNA polymerase III alpha NTPase domain BOC52_26555 PF02811 PHP domain BOC52_26555 PF00929 Exonuclease BOC52_26630 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BOC52_26635 PF03466 LysR substrate binding domain BOC52_26635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_26640 PF08267 Cobalamin-independent synthase, N-terminal domain BOC52_26640 PF01717 Cobalamin-independent synthase, Catalytic domain BOC52_26645 PF01433 Peptidase family M1 domain BOC52_26645 PF11940 Domain of unknown function (DUF3458) Ig-like fold BOC52_26645 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BOC52_26660 PF01169 Uncharacterized protein family UPF0016 BOC52_26670 PF01979 Amidohydrolase family BOC52_26675 PF00860 Permease family BOC52_26680 PF00962 Adenosine/AMP deaminase BOC52_26695 PF02600 Disulfide bond formation protein DsbB BOC52_26700 PF01425 Amidase BOC52_26705 PF07722 Peptidase C26 BOC52_26710 PF07690 Major Facilitator Superfamily BOC52_26725 PF01494 FAD binding domain BOC52_26740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_26740 PF00037 4Fe-4S binding domain BOC52_26740 PF01568 Molydopterin dinucleotide binding domain BOC52_26740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BOC52_26740 PF00384 Molybdopterin oxidoreductase BOC52_26745 PF00037 4Fe-4S binding domain BOC52_26745 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BOC52_26745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BOC52_26755 PF12728 Helix-turn-helix domain BOC52_26755 PF12727 PBP superfamily domain BOC52_26765 PF00398 Ribosomal RNA adenine dimethylase BOC52_26775 PF13419 Haloacid dehalogenase-like hydrolase BOC52_26785 PF00691 OmpA family BOC52_26795 PF03989 DNA gyrase C-terminal domain, beta-propeller BOC52_26795 PF00521 DNA gyrase/topoisomerase IV, subunit A BOC52_26805 PF00266 Aminotransferase class-V BOC52_26810 PF00800 Prephenate dehydratase BOC52_26810 PF01842 ACT domain BOC52_26810 PF01817 Chorismate mutase type II BOC52_26820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BOC52_26825 PF02224 Cytidylate kinase BOC52_26830 PF00575 S1 RNA binding domain BOC52_26835 PF00216 Bacterial DNA-binding protein BOC52_26845 PF18073 Rubredoxin metal binding domain BOC52_26850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BOC52_26850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BOC52_26850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BOC52_26855 PF00294 pfkB family carbohydrate kinase BOC52_26860 PF01370 NAD dependent epimerase/dehydratase family BOC52_26875 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_26880 PF13406 Transglycosylase SLT domain BOC52_26885 PF00850 Histone deacetylase domain BOC52_26895 PF12146 Serine aminopeptidase, S33 BOC52_26900 PF09383 NIL domain BOC52_26900 PF00005 ABC transporter BOC52_26905 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_26910 PF03180 NLPA lipoprotein BOC52_26915 PF01012 Electron transfer flavoprotein domain BOC52_26920 PF01012 Electron transfer flavoprotein domain BOC52_26920 PF00766 Electron transfer flavoprotein FAD-binding domain BOC52_26925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_26925 PF12806 Acetyl-CoA dehydrogenase C-terminal like BOC52_26925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_26925 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_26930 PF01266 FAD dependent oxidoreductase BOC52_26935 PF01037 Lrp/AsnC ligand binding domain BOC52_26950 PF07995 Glucose / Sorbosone dehydrogenase BOC52_26955 PF00886 Ribosomal protein S16 BOC52_26960 PF05239 PRC-barrel domain BOC52_26960 PF01782 RimM N-terminal domain BOC52_26965 PF01746 tRNA (Guanine-1)-methyltransferase BOC52_26970 PF01245 Ribosomal protein L19 BOC52_26990 PF00293 NUDIX domain BOC52_26995 PF17113 Regulatory signalling modulator protein AmpE BOC52_26995 PF03186 CobD/Cbib protein BOC52_27005 PF03193 RsgA GTPase BOC52_27010 PF01435 Peptidase family M48 BOC52_27015 PF00929 Exonuclease BOC52_27020 PF00994 Probable molybdopterin binding domain BOC52_27025 PF04751 Protein of unknown function (DUF615) BOC52_27035 PF01523 Putative modulator of DNA gyrase BOC52_27045 PF00186 Dihydrofolate reductase BOC52_27050 PF00158 Sigma-54 interaction domain BOC52_27050 PF00072 Response regulator receiver domain BOC52_27050 PF02954 Bacterial regulatory protein, Fis family BOC52_27075 PF00072 Response regulator receiver domain BOC52_27075 PF00158 Sigma-54 interaction domain BOC52_27075 PF02954 Bacterial regulatory protein, Fis family BOC52_27080 PF00303 Thymidylate synthase BOC52_27105 PF03061 Thioesterase superfamily BOC52_27110 PF10415 Fumarase C C-terminus BOC52_27110 PF00206 Lyase BOC52_27125 PF01554 MatE BOC52_27155 PF05981 CreA protein BOC52_27170 PF11953 Domain of unknown function (DUF3470) BOC52_27170 PF00037 4Fe-4S binding domain BOC52_27180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BOC52_27180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BOC52_27195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BOC52_27195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_27200 PF02646 RmuC family BOC52_27215 PF00994 Probable molybdopterin binding domain BOC52_27215 PF03454 MoeA C-terminal region (domain IV) BOC52_27215 PF03453 MoeA N-terminal region (domain I and II) BOC52_27220 PF12804 MobA-like NTP transferase domain BOC52_27225 PF06463 Molybdenum Cofactor Synthesis C BOC52_27225 PF04055 Radical SAM superfamily BOC52_27230 PF12111 Polyribonucleotide phosphorylase C terminal BOC52_27230 PF10150 Ribonuclease E/G family BOC52_27230 PF00575 S1 RNA binding domain BOC52_27240 PF00849 RNA pseudouridylate synthase BOC52_27240 PF01479 S4 domain BOC52_27245 PF13419 Haloacid dehalogenase-like hydrolase BOC52_27255 PF01343 Peptidase family S49 BOC52_27260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_27265 PF02545 Maf-like protein BOC52_27270 PF02620 Large ribosomal RNA subunit accumulation protein YceD BOC52_27275 PF01783 Ribosomal L32p protein family BOC52_27280 PF02504 Fatty acid synthesis protein BOC52_27285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BOC52_27285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BOC52_27290 PF00698 Acyl transferase domain BOC52_27300 PF00550 Phosphopantetheine attachment site BOC52_27305 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_27305 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_27315 PF04542 Sigma-70 region 2 BOC52_27315 PF08281 Sigma-70, region 4 BOC52_27325 PF03888 MucB/RseB N-terminal domain BOC52_27325 PF17188 MucB/RseB C-terminal domain BOC52_27340 PF00009 Elongation factor Tu GTP binding domain BOC52_27340 PF03144 Elongation factor Tu domain 2 BOC52_27340 PF06421 GTP-binding protein LepA C-terminus BOC52_27340 PF00679 Elongation factor G C-terminus BOC52_27345 PF10502 Signal peptidase, peptidase S26 BOC52_27350 PF00035 Double-stranded RNA binding motif BOC52_27350 PF14622 Ribonuclease-III-like BOC52_27355 PF01926 50S ribosome-binding GTPase BOC52_27355 PF07650 KH domain BOC52_27360 PF02565 Recombination protein O C terminal BOC52_27360 PF11967 Recombination protein O N terminal BOC52_27365 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BOC52_27370 PF01648 4'-phosphopantetheinyl transferase superfamily BOC52_27375 PF00933 Glycosyl hydrolase family 3 N terminal domain BOC52_27380 PF02954 Bacterial regulatory protein, Fis family BOC52_27380 PF00072 Response regulator receiver domain BOC52_27380 PF00158 Sigma-54 interaction domain BOC52_27385 PF08207 Elongation factor P (EF-P) KOW-like domain BOC52_27385 PF09285 Elongation factor P, C-terminal BOC52_27385 PF01132 Elongation factor P (EF-P) OB domain BOC52_27395 PF08459 UvrC Helix-hairpin-helix N-terminal BOC52_27395 PF02151 UvrB/uvrC motif BOC52_27395 PF01541 GIY-YIG catalytic domain BOC52_27400 PF01066 CDP-alcohol phosphatidyltransferase BOC52_27420 PF13185 GAF domain BOC52_27425 PF03466 LysR substrate binding domain BOC52_27425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_27430 PF02678 Pirin BOC52_27430 PF05726 Pirin C-terminal cupin domain BOC52_27435 PF13673 Acetyltransferase (GNAT) domain BOC52_27450 PF02630 SCO1/SenC BOC52_27460 PF02358 Trehalose-phosphatase BOC52_27465 PF00982 Glycosyltransferase family 20 BOC52_27470 PF00664 ABC transporter transmembrane region BOC52_27470 PF00005 ABC transporter BOC52_27490 PF01266 FAD dependent oxidoreductase BOC52_27495 PF13458 Periplasmic binding protein BOC52_27500 PF05506 Domain of unknown function (DUF756) BOC52_27500 PF04185 Phosphoesterase family BOC52_27515 PF08543 Phosphomethylpyrimidine kinase BOC52_27525 PF00561 alpha/beta hydrolase fold BOC52_27535 PF00296 Luciferase-like monooxygenase BOC52_27550 PF04794 YdjC-like protein BOC52_27565 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_27570 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_27575 PF00005 ABC transporter BOC52_27580 PF12833 Helix-turn-helix domain BOC52_27595 PF00202 Aminotransferase class-III BOC52_27600 PF04958 Arginine N-succinyltransferase beta subunit BOC52_27605 PF04958 Arginine N-succinyltransferase beta subunit BOC52_27610 PF00171 Aldehyde dehydrogenase family BOC52_27615 PF04996 Succinylarginine dihydrolase BOC52_27620 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BOC52_27635 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_27645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BOC52_27650 PF00510 Cytochrome c oxidase subunit III BOC52_27655 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_27660 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BOC52_27660 PF06481 COX Aromatic Rich Motif BOC52_27675 PF02082 Transcriptional regulator BOC52_27690 PF01883 Iron-sulfur cluster assembly protein BOC52_27695 PF01592 NifU-like N terminal domain BOC52_27700 PF00266 Aminotransferase class-V BOC52_27710 PF00005 ABC transporter BOC52_27715 PF01458 Uncharacterized protein family (UPF0051) BOC52_27735 PF02203 Tar ligand binding domain homologue BOC52_27735 PF00672 HAMP domain BOC52_27735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_27740 PF04055 Radical SAM superfamily BOC52_27740 PF06969 HemN C-terminal domain BOC52_27745 PF00027 Cyclic nucleotide-binding domain BOC52_27745 PF00520 Ion transport protein BOC52_27810 PF01883 Iron-sulfur cluster assembly protein BOC52_27815 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_27825 PF00487 Fatty acid desaturase BOC52_27830 PF00875 DNA photolyase BOC52_27830 PF03441 FAD binding domain of DNA photolyase BOC52_27845 PF03472 Autoinducer binding domain BOC52_27845 PF00196 Bacterial regulatory proteins, luxR family BOC52_27870 PF00221 Aromatic amino acid lyase BOC52_27875 PF00392 Bacterial regulatory proteins, gntR family BOC52_27875 PF07702 UTRA domain BOC52_27880 PF01175 Urocanase Rossmann-like domain BOC52_27880 PF17391 Urocanase N-terminal domain BOC52_27880 PF17392 Urocanase C-terminal domain BOC52_27890 PF01979 Amidohydrolase family BOC52_27895 PF01979 Amidohydrolase family BOC52_27930 PF07722 Peptidase C26 BOC52_27935 PF00120 Glutamine synthetase, catalytic domain BOC52_27940 PF00202 Aminotransferase class-III BOC52_27960 PF13276 HTH-like domain BOC52_27960 PF13333 Integrase core domain BOC52_27960 PF00665 Integrase core domain BOC52_27965 PF01527 Transposase BOC52_27970 PF01610 Transposase BOC52_27970 PF13542 Helix-turn-helix domain of transposase family ISL3 BOC52_27970 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BOC52_27985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_27985 PF03466 LysR substrate binding domain BOC52_27990 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_27990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_27990 PF18158 Adaptive response protein AidB N-terminal domain BOC52_27995 PF02515 CoA-transferase family III BOC52_28005 PF00083 Sugar (and other) transporter BOC52_28005 PF07690 Major Facilitator Superfamily BOC52_28010 PF04362 Bacterial Fe(2+) trafficking BOC52_28015 PF00696 Amino acid kinase family BOC52_28015 PF00583 Acetyltransferase (GNAT) family BOC52_28020 PF00270 DEAD/DEAH box helicase BOC52_28020 PF04408 Helicase associated domain (HA2) BOC52_28020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BOC52_28020 PF00271 Helicase conserved C-terminal domain BOC52_28020 PF11898 Domain of unknown function (DUF3418) BOC52_28045 PF02464 Competence-damaged protein BOC52_28045 PF00994 Probable molybdopterin binding domain BOC52_28045 PF18146 Damage-inducible protein CinA KH domain BOC52_28065 PF00989 PAS fold BOC52_28065 PF00512 His Kinase A (phospho-acceptor) domain BOC52_28065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_28070 PF00158 Sigma-54 interaction domain BOC52_28070 PF02954 Bacterial regulatory protein, Fis family BOC52_28070 PF00072 Response regulator receiver domain BOC52_28080 PF00072 Response regulator receiver domain BOC52_28080 PF00196 Bacterial regulatory proteins, luxR family BOC52_28085 PF07730 Histidine kinase BOC52_28090 PF02665 Nitrate reductase gamma subunit BOC52_28095 PF02613 Nitrate reductase delta subunit BOC52_28100 PF14711 Respiratory nitrate reductase beta C-terminal BOC52_28100 PF13247 4Fe-4S dicluster domain BOC52_28105 PF14710 Respiratory nitrate reductase alpha N-terminal BOC52_28105 PF01568 Molydopterin dinucleotide binding domain BOC52_28105 PF00384 Molybdopterin oxidoreductase BOC52_28110 PF07690 Major Facilitator Superfamily BOC52_28115 PF07690 Major Facilitator Superfamily BOC52_28130 PF11799 impB/mucB/samB family C-terminal domain BOC52_28130 PF00817 impB/mucB/samB family BOC52_28135 PF01432 Peptidase family M3 BOC52_28145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BOC52_28145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BOC52_28150 PF00072 Response regulator receiver domain BOC52_28150 PF00196 Bacterial regulatory proteins, luxR family BOC52_28155 PF00989 PAS fold BOC52_28155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_28155 PF00512 His Kinase A (phospho-acceptor) domain BOC52_28165 PF00456 Transketolase, thiamine diphosphate binding domain BOC52_28165 PF17831 Pyruvate dehydrogenase E1 component middle domain BOC52_28170 PF02817 e3 binding domain BOC52_28170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BOC52_28170 PF00364 Biotin-requiring enzyme BOC52_28175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_28175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BOC52_28185 PF09361 Phasin protein BOC52_28195 PF00768 D-alanyl-D-alanine carboxypeptidase BOC52_28205 PF09339 IclR helix-turn-helix domain BOC52_28205 PF01614 Bacterial transcriptional regulator BOC52_28215 PF02754 Cysteine-rich domain BOC52_28220 PF02589 LUD domain BOC52_28220 PF13183 4Fe-4S dicluster domain BOC52_28220 PF11870 Domain of unknown function (DUF3390) BOC52_28230 PF01451 Low molecular weight phosphotyrosine protein phosphatase BOC52_28235 PF02082 Transcriptional regulator BOC52_28240 PF00266 Aminotransferase class-V BOC52_28245 PF01592 NifU-like N terminal domain BOC52_28255 PF07743 HSCB C-terminal oligomerisation domain BOC52_28260 PF00012 Hsp70 protein BOC52_28265 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_28270 PF04384 Iron-sulphur cluster assembly BOC52_28290 PF00152 tRNA synthetases class II (D, K and N) BOC52_28290 PF01336 OB-fold nucleic acid binding domain BOC52_28295 PF03462 PCRF domain BOC52_28295 PF00472 RF-1 domain BOC52_28300 PF00472 RF-1 domain BOC52_28300 PF03462 PCRF domain BOC52_28305 PF17768 RecJ OB domain BOC52_28305 PF02272 DHHA1 domain BOC52_28305 PF01368 DHH family BOC52_28320 PF02687 FtsX-like permease family BOC52_28320 PF12704 MacB-like periplasmic core domain BOC52_28325 PF00005 ABC transporter BOC52_28330 PF01026 TatD related DNase BOC52_28335 PF03772 Competence protein BOC52_28335 PF00753 Metallo-beta-lactamase superfamily BOC52_28340 PF08386 TAP-like protein BOC52_28340 PF00561 alpha/beta hydrolase fold BOC52_28350 PF00117 Glutamine amidotransferase class-I BOC52_28350 PF06418 CTP synthase N-terminus BOC52_28355 PF00793 DAHP synthetase I family BOC52_28360 PF00113 Enolase, C-terminal TIM barrel domain BOC52_28360 PF03952 Enolase, N-terminal domain BOC52_28365 PF04977 Septum formation initiator BOC52_28375 PF01430 Hsp33 protein BOC52_28380 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_28385 PF04305 Protein of unknown function (DUF455) BOC52_28395 PF00561 alpha/beta hydrolase fold BOC52_28405 PF02811 PHP domain BOC52_28410 PF01300 Telomere recombination BOC52_28415 PF02163 Peptidase family M50 BOC52_28420 PF00579 tRNA synthetases class I (W and Y) BOC52_28430 PF00701 Dihydrodipicolinate synthetase family BOC52_28435 PF06804 NlpB/DapX lipoprotein BOC52_28440 PF10996 Beta-Casp domain BOC52_28440 PF00753 Metallo-beta-lactamase superfamily BOC52_28440 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BOC52_28450 PF08007 Cupin superfamily protein BOC52_28455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BOC52_28465 PF05190 MutS family domain IV BOC52_28465 PF05188 MutS domain II BOC52_28465 PF01624 MutS domain I BOC52_28465 PF05192 MutS domain III BOC52_28465 PF00488 MutS domain V BOC52_28490 PF00459 Inositol monophosphatase family BOC52_28500 PF00588 SpoU rRNA Methylase family BOC52_28505 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_28515 PF00149 Calcineurin-like phosphoesterase BOC52_28520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BOC52_28525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BOC52_28535 PF09190 DALR domain BOC52_28535 PF01406 tRNA synthetases class I (C) catalytic domain BOC52_28545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BOC52_28550 PF01171 PP-loop family BOC52_28550 PF09179 TilS substrate binding domain BOC52_28550 PF11734 TilS substrate C-terminal domain BOC52_28560 PF01842 ACT domain BOC52_28560 PF13840 ACT domain BOC52_28560 PF00696 Amino acid kinase family BOC52_28595 PF00873 AcrB/AcrD/AcrF family BOC52_28600 PF13533 Biotin-lipoyl like BOC52_28615 PF00009 Elongation factor Tu GTP binding domain BOC52_28620 PF00668 Condensation domain BOC52_28620 PF00550 Phosphopantetheine attachment site BOC52_28620 PF00501 AMP-binding enzyme BOC52_28620 PF13193 AMP-binding enzyme C-terminal domain BOC52_28635 PF00501 AMP-binding enzyme BOC52_28635 PF13193 AMP-binding enzyme C-terminal domain BOC52_28635 PF00668 Condensation domain BOC52_28635 PF00550 Phosphopantetheine attachment site BOC52_28645 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_28665 PF02779 Transketolase, pyrimidine binding domain BOC52_28665 PF02780 Transketolase, C-terminal domain BOC52_28665 PF00456 Transketolase, thiamine diphosphate binding domain BOC52_28670 PF02780 Transketolase, C-terminal domain BOC52_28670 PF02779 Transketolase, pyrimidine binding domain BOC52_28680 PF01757 Acyltransferase family BOC52_28685 PF00266 Aminotransferase class-V BOC52_28695 PF01507 Phosphoadenosine phosphosulfate reductase family BOC52_28700 PF00009 Elongation factor Tu GTP binding domain BOC52_28705 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_28710 PF00206 Lyase BOC52_28710 PF02655 ATP-grasp domain BOC52_28725 PF00557 Metallopeptidase family M24 BOC52_28740 PF00037 4Fe-4S binding domain BOC52_28740 PF11953 Domain of unknown function (DUF3470) BOC52_28745 PF06463 Molybdenum Cofactor Synthesis C BOC52_28745 PF04055 Radical SAM superfamily BOC52_28750 PF00970 Oxidoreductase FAD-binding domain BOC52_28750 PF00175 Oxidoreductase NAD-binding domain BOC52_28760 PF01568 Molydopterin dinucleotide binding domain BOC52_28760 PF00384 Molybdopterin oxidoreductase BOC52_28760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BOC52_28785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BOC52_28790 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_28795 PF12911 N-terminal TM domain of oligopeptide transport permease C BOC52_28795 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_28800 PF00005 ABC transporter BOC52_28800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BOC52_28805 PF00877 NlpC/P60 family BOC52_28810 PF01734 Patatin-like phospholipase BOC52_28815 PF00749 tRNA synthetases class I (E and Q), catalytic domain BOC52_28855 PF12833 Helix-turn-helix domain BOC52_28855 PF02311 AraC-like ligand binding domain BOC52_28860 PF03737 Aldolase/RraA BOC52_28875 PF01274 Malate synthase BOC52_28885 PF03466 LysR substrate binding domain BOC52_28885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_28890 PF00582 Universal stress protein family BOC52_28895 PF00463 Isocitrate lyase family BOC52_28900 PF00271 Helicase conserved C-terminal domain BOC52_28900 PF00270 DEAD/DEAH box helicase BOC52_28910 PF00814 Glycoprotease family BOC52_28920 PF03167 Uracil DNA glycosylase superfamily BOC52_28935 PF08543 Phosphomethylpyrimidine kinase BOC52_28940 PF07690 Major Facilitator Superfamily BOC52_28945 PF00842 Alanine racemase, C-terminal domain BOC52_28945 PF01168 Alanine racemase, N-terminal domain BOC52_28950 PF18073 Rubredoxin metal binding domain BOC52_28960 PF12848 ABC transporter BOC52_28960 PF00005 ABC transporter BOC52_28965 PF00255 Glutathione peroxidase BOC52_28970 PF13091 PLD-like domain BOC52_28980 PF05175 Methyltransferase small domain BOC52_28985 PF01546 Peptidase family M20/M25/M40 BOC52_28985 PF07687 Peptidase dimerisation domain BOC52_28990 PF03960 ArsC family BOC52_28995 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_28995 PF14602 Hexapeptide repeat of succinyl-transferase BOC52_28995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BOC52_29000 PF00155 Aminotransferase class I and II BOC52_29015 PF06470 SMC proteins Flexible Hinge Domain BOC52_29015 PF02463 RecF/RecN/SMC N terminal domain BOC52_29030 PF03120 NAD-dependent DNA ligase OB-fold domain BOC52_29030 PF01653 NAD-dependent DNA ligase adenylation domain BOC52_29030 PF00533 BRCA1 C Terminus (BRCT) domain BOC52_29030 PF12826 Helix-hairpin-helix motif BOC52_29030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BOC52_29035 PF01327 Polypeptide deformylase BOC52_29040 PF00849 RNA pseudouridylate synthase BOC52_29040 PF01479 S4 domain BOC52_29045 PF01909 Nucleotidyltransferase domain BOC52_29045 PF08335 GlnD PII-uridylyltransferase BOC52_29045 PF01966 HD domain BOC52_29050 PF00557 Metallopeptidase family M24 BOC52_29055 PF00318 Ribosomal protein S2 BOC52_29060 PF00889 Elongation factor TS BOC52_29065 PF00696 Amino acid kinase family BOC52_29070 PF01765 Ribosome recycling factor BOC52_29075 PF01255 Putative undecaprenyl diphosphate synthase BOC52_29085 PF13288 DXP reductoisomerase C-terminal domain BOC52_29085 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BOC52_29085 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BOC52_29090 PF02163 Peptidase family M50 BOC52_29090 PF17820 PDZ domain BOC52_29095 PF07244 Surface antigen variable number repeat BOC52_29095 PF01103 Surface antigen BOC52_29105 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_29105 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BOC52_29110 PF07977 FabA-like domain BOC52_29115 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BOC52_29115 PF00132 Bacterial transferase hexapeptide (six repeats) BOC52_29120 PF02684 Lipid-A-disaccharide synthetase BOC52_29125 PF01351 Ribonuclease HII BOC52_29130 PF08032 RNA 2'-O ribose methyltransferase substrate binding BOC52_29130 PF00588 SpoU rRNA Methylase family BOC52_29140 PF03618 Kinase/pyrophosphorylase BOC52_29145 PF09286 Pro-kumamolisin, activation domain BOC52_29145 PF00082 Subtilase family BOC52_29170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BOC52_29170 PF02896 PEP-utilising enzyme, TIM barrel domain BOC52_29170 PF00391 PEP-utilising enzyme, mobile domain BOC52_29180 PF16200 C-terminal region of band_7 BOC52_29180 PF01145 SPFH domain / Band 7 family BOC52_29185 PF01668 SmpB protein BOC52_29190 PF03364 Polyketide cyclase / dehydrase and lipid transport BOC52_29195 PF03658 RnfH family Ubiquitin BOC52_29200 PF00892 EamA-like transporter family BOC52_29225 PF00571 CBS domain BOC52_29225 PF00478 IMP dehydrogenase / GMP reductase domain BOC52_29235 PF02540 NAD synthase BOC52_29235 PF00958 GMP synthase C terminal domain BOC52_29235 PF00117 Glutamine amidotransferase class-I BOC52_29275 PF07690 Major Facilitator Superfamily BOC52_29305 PF09350 Domain of unknown function (DUF1992) BOC52_29310 PF14437 MafB19-like deaminase BOC52_29315 PF17676 LD-carboxypeptidase C-terminal domain BOC52_29315 PF02016 LD-carboxypeptidase N-terminal domain BOC52_29320 PF00392 Bacterial regulatory proteins, gntR family BOC52_29320 PF07729 FCD domain BOC52_29325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BOC52_29330 PF01177 Asp/Glu/Hydantoin racemase BOC52_29340 PF01014 Uricase BOC52_29340 PF09349 OHCU decarboxylase BOC52_29345 PF03561 Allantoicase repeat BOC52_29350 PF04115 Ureidoglycolate lyase BOC52_29360 PF00576 HIUase/Transthyretin family BOC52_29370 PF01979 Amidohydrolase family BOC52_29375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_29375 PF03466 LysR substrate binding domain BOC52_29385 PF07311 Dodecin BOC52_29390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_29390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BOC52_29400 PF01741 Large-conductance mechanosensitive channel, MscL BOC52_29420 PF00912 Transglycosylase BOC52_29420 PF00905 Penicillin binding protein transpeptidase domain BOC52_29420 PF17092 Penicillin-binding protein OB-like domain BOC52_29445 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_29450 PF07687 Peptidase dimerisation domain BOC52_29450 PF01546 Peptidase family M20/M25/M40 BOC52_29465 PF03461 TRCF domain BOC52_29465 PF00271 Helicase conserved C-terminal domain BOC52_29465 PF00270 DEAD/DEAH box helicase BOC52_29465 PF02559 CarD-like/TRCF domain BOC52_29465 PF17757 UvrB interaction domain BOC52_29470 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BOC52_29475 PF02542 YgbB family BOC52_29480 PF02627 Carboxymuconolactone decarboxylase family BOC52_29485 PF00578 AhpC/TSA family BOC52_29490 PF00512 His Kinase A (phospho-acceptor) domain BOC52_29490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_29490 PF00672 HAMP domain BOC52_29495 PF00072 Response regulator receiver domain BOC52_29495 PF00486 Transcriptional regulatory protein, C terminal BOC52_29600 PF00850 Histone deacetylase domain BOC52_29610 PF00267 Gram-negative porin BOC52_29635 PF01047 MarR family BOC52_29640 PF02595 Glycerate kinase family BOC52_29645 PF05697 Bacterial trigger factor protein (TF) BOC52_29645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BOC52_29645 PF05698 Bacterial trigger factor protein (TF) C-terminus BOC52_29650 PF00574 Clp protease BOC52_29655 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_29655 PF07724 AAA domain (Cdc48 subfamily) BOC52_29655 PF06689 ClpX C4-type zinc finger BOC52_29660 PF02190 ATP-dependent protease La (LON) substrate-binding domain BOC52_29660 PF05362 Lon protease (S16) C-terminal proteolytic domain BOC52_29660 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_29730 PF13472 GDSL-like Lipase/Acylhydrolase family BOC52_29735 PF00005 ABC transporter BOC52_29740 PF00342 Phosphoglucose isomerase BOC52_29745 PF01256 Carbohydrate kinase BOC52_29750 PF01266 FAD dependent oxidoreductase BOC52_29760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BOC52_29760 PF02769 AIR synthase related protein, C-terminal domain BOC52_29760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BOC52_29775 PF01722 BolA-like protein BOC52_29780 PF04279 Intracellular septation protein A BOC52_29785 PF01641 SelR domain BOC52_29790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BOC52_29795 PF00501 AMP-binding enzyme BOC52_29795 PF13193 AMP-binding enzyme C-terminal domain BOC52_29800 PF00378 Enoyl-CoA hydratase/isomerase BOC52_29800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BOC52_29800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BOC52_29805 PF00857 Isochorismatase family BOC52_29810 PF02803 Thiolase, C-terminal domain BOC52_29810 PF00108 Thiolase, N-terminal domain BOC52_29840 PF16884 N-terminal domain of oxidoreductase BOC52_29840 PF00107 Zinc-binding dehydrogenase BOC52_29845 PF07859 alpha/beta hydrolase fold BOC52_29850 PF13673 Acetyltransferase (GNAT) domain BOC52_29860 PF01571 Aminomethyltransferase folate-binding domain BOC52_29865 PF02618 YceG-like family BOC52_29870 PF02223 Thymidylate kinase BOC52_29875 PF09115 DNA polymerase III, delta subunit, C terminal BOC52_29880 PF00583 Acetyltransferase (GNAT) family BOC52_29885 PF01026 TatD related DNase BOC52_29905 PF02463 RecF/RecN/SMC N terminal domain BOC52_29915 PF00534 Glycosyl transferases group 1 BOC52_29915 PF13439 Glycosyltransferase Family 4 BOC52_29945 PF00710 Asparaginase, N-terminal BOC52_29945 PF17763 Glutaminase/Asparaginase C-terminal domain BOC52_29955 PF01476 LysM domain BOC52_29955 PF04972 BON domain BOC52_29965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BOC52_29965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BOC52_29970 PF01261 Xylose isomerase-like TIM barrel BOC52_29975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_29975 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_29975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_29980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_29980 PF03466 LysR substrate binding domain BOC52_29995 PF08281 Sigma-70, region 4 BOC52_29995 PF04542 Sigma-70 region 2 BOC52_30005 PF01250 Ribosomal protein S6 BOC52_30015 PF01084 Ribosomal protein S18 BOC52_30020 PF01281 Ribosomal protein L9, N-terminal domain BOC52_30020 PF03948 Ribosomal protein L9, C-terminal domain BOC52_30030 PF03796 DnaB-like helicase C terminal domain BOC52_30030 PF00772 DnaB-like helicase N terminal domain BOC52_30040 PF01384 Phosphate transporter family BOC52_30050 PF00877 NlpC/P60 family BOC52_30055 PF13638 PIN domain BOC52_30055 PF02562 PhoH-like protein BOC52_30065 PF00578 AhpC/TSA family BOC52_30070 PF01522 Polysaccharide deacetylase BOC52_30075 PF01370 NAD dependent epimerase/dehydratase family BOC52_30075 PF00551 Formyl transferase BOC52_30075 PF02911 Formyl transferase, C-terminal domain BOC52_30080 PF01370 NAD dependent epimerase/dehydratase family BOC52_30080 PF02911 Formyl transferase, C-terminal domain BOC52_30080 PF00551 Formyl transferase BOC52_30085 PF00535 Glycosyl transferase family 2 BOC52_30090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BOC52_30100 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BOC52_30110 PF00155 Aminotransferase class I and II BOC52_30115 PF01842 ACT domain BOC52_30115 PF03447 Homoserine dehydrogenase, NAD binding domain BOC52_30115 PF00742 Homoserine dehydrogenase BOC52_30120 PF14821 Threonine synthase N terminus BOC52_30120 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_30135 PF03454 MoeA C-terminal region (domain IV) BOC52_30135 PF00994 Probable molybdopterin binding domain BOC52_30135 PF03453 MoeA N-terminal region (domain I and II) BOC52_30140 PF02597 ThiS family BOC52_30145 PF02391 MoaE protein BOC52_30150 PF01152 Bacterial-like globin BOC52_30155 PF02082 Transcriptional regulator BOC52_30160 PF07724 AAA domain (Cdc48 subfamily) BOC52_30160 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_30160 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_30160 PF02861 Clp amino terminal domain, pathogenicity island component BOC52_30160 PF17871 AAA lid domain BOC52_30185 PF01554 MatE BOC52_30200 PF01197 Ribosomal protein L31 BOC52_30205 PF06167 Glucose-regulated metallo-peptidase M90 BOC52_30210 PF07690 Major Facilitator Superfamily BOC52_30215 PF13411 MerR HTH family regulatory protein BOC52_30220 PF07498 Rho termination factor, N-terminal domain BOC52_30220 PF07497 Rho termination factor, RNA-binding domain BOC52_30220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BOC52_30230 PF00085 Thioredoxin BOC52_30240 PF12170 DNA polymerase III tau subunit V interacting with alpha BOC52_30240 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BOC52_30240 PF12169 DNA polymerase III subunits gamma and tau domain III BOC52_30245 PF02575 YbaB/EbfC DNA-binding family BOC52_30250 PF02132 RecR protein BOC52_30250 PF13662 Toprim domain BOC52_30255 PF02515 CoA-transferase family III BOC52_30260 PF01975 Survival protein SurE BOC52_30270 PF01476 LysM domain BOC52_30270 PF01551 Peptidase family M23 BOC52_30275 PF00140 Sigma-70 factor, region 1.2 BOC52_30275 PF04545 Sigma-70, region 4 BOC52_30275 PF04539 Sigma-70 region 3 BOC52_30275 PF04542 Sigma-70 region 2 BOC52_30295 PF05958 tRNA (Uracil-5-)-methyltransferase BOC52_30300 PF01027 Inhibitor of apoptosis-promoting Bax1 BOC52_30305 PF00334 Nucleoside diphosphate kinase BOC52_30310 PF04055 Radical SAM superfamily BOC52_30320 PF04551 GcpE protein BOC52_30325 PF13393 Histidyl-tRNA synthetase BOC52_30325 PF03129 Anticodon binding domain BOC52_30330 PF09976 Tetratricopeptide repeat-like domain BOC52_30335 PF13360 PQQ-like domain BOC52_30340 PF01926 50S ribosome-binding GTPase BOC52_30340 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BOC52_30345 PF17209 Hfq protein BOC52_30350 PF01926 50S ribosome-binding GTPase BOC52_30350 PF13167 GTP-binding GTPase N-terminal BOC52_30350 PF16360 GTP-binding GTPase Middle Region BOC52_30355 PF01145 SPFH domain / Band 7 family BOC52_30355 PF12221 Bacterial membrane protein N terminal BOC52_30360 PF01145 SPFH domain / Band 7 family BOC52_30370 PF13393 Histidyl-tRNA synthetase BOC52_30375 PF00709 Adenylosuccinate synthetase BOC52_30380 PF00156 Phosphoribosyl transferase domain BOC52_30390 PF02705 K+ potassium transporter BOC52_30405 PF16921 Tex protein YqgF-like domain BOC52_30405 PF00575 S1 RNA binding domain BOC52_30405 PF17674 HHH domain BOC52_30405 PF09371 Tex-like protein N-terminal domain BOC52_30420 PF13307 Helicase C-terminal domain BOC52_30420 PF04851 Type III restriction enzyme, res subunit BOC52_30425 PF13525 Outer membrane lipoprotein BOC52_30430 PF00849 RNA pseudouridylate synthase BOC52_30430 PF01479 S4 domain BOC52_30440 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BOC52_30445 PF00108 Thiolase, N-terminal domain BOC52_30445 PF02803 Thiolase, C-terminal domain BOC52_30450 PF00106 short chain dehydrogenase BOC52_30455 PF07879 PHB/PHA accumulation regulator DNA-binding domain BOC52_30455 PF05233 PHB accumulation regulatory domain BOC52_30465 PF00919 Uncharacterized protein family UPF0004 BOC52_30465 PF18693 TRAM domain BOC52_30465 PF04055 Radical SAM superfamily BOC52_30470 PF00294 pfkB family carbohydrate kinase BOC52_30475 PF02803 Thiolase, C-terminal domain BOC52_30475 PF00108 Thiolase, N-terminal domain BOC52_30485 PF01053 Cys/Met metabolism PLP-dependent enzyme BOC52_30505 PF03649 Uncharacterised protein family (UPF0014) BOC52_30510 PF00005 ABC transporter BOC52_30515 PF05170 AsmA family BOC52_30525 PF00005 ABC transporter BOC52_30525 PF12848 ABC transporter BOC52_30540 PF00171 Aldehyde dehydrogenase family BOC52_30545 PF03060 Nitronate monooxygenase BOC52_30550 PF03922 OmpW family BOC52_30565 PF01566 Natural resistance-associated macrophage protein BOC52_30570 PF13416 Bacterial extracellular solute-binding protein BOC52_30575 PF08402 TOBE domain BOC52_30575 PF00005 ABC transporter BOC52_30580 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_30585 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_30600 PF00753 Metallo-beta-lactamase superfamily BOC52_30605 PF00072 Response regulator receiver domain BOC52_30605 PF00158 Sigma-54 interaction domain BOC52_30605 PF02954 Bacterial regulatory protein, Fis family BOC52_30615 PF13443 Cro/C1-type HTH DNA-binding domain BOC52_30635 PF13411 MerR HTH family regulatory protein BOC52_30635 PF07739 TipAS antibiotic-recognition domain BOC52_30645 PF02321 Outer membrane efflux protein BOC52_30650 PF00873 AcrB/AcrD/AcrF family BOC52_30655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_30660 PF08361 MAATS-type transcriptional repressor, C-terminal region BOC52_30660 PF00440 Bacterial regulatory proteins, tetR family BOC52_30665 PF00654 Voltage gated chloride channel BOC52_30670 PF03601 Conserved hypothetical protein 698 BOC52_30675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_30675 PF03466 LysR substrate binding domain BOC52_30690 PF00294 pfkB family carbohydrate kinase BOC52_30695 PF07690 Major Facilitator Superfamily BOC52_30700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BOC52_30700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_30795 PF01544 CorA-like Mg2+ transporter protein BOC52_30825 PF12794 Mechanosensitive ion channel inner membrane domain 1 BOC52_30825 PF12795 Mechanosensitive ion channel porin domain BOC52_30825 PF00924 Mechanosensitive ion channel BOC52_30835 PF04205 FMN-binding domain BOC52_30835 PF12801 4Fe-4S binding domain BOC52_30860 PF12679 ABC-2 family transporter protein BOC52_30865 PF00005 ABC transporter BOC52_30870 PF05048 Periplasmic copper-binding protein (NosD) BOC52_30875 PF18764 Nitrous oxide reductase propeller repeat BOC52_30875 PF13473 Cupredoxin-like domain BOC52_30875 PF18793 Nitrous oxide reductase propeller repeat 2 BOC52_30885 PF02424 ApbE family BOC52_30890 PF00005 ABC transporter BOC52_30910 PF02734 DAK2 domain BOC52_30910 PF02733 Dak1 domain BOC52_30920 PF00355 Rieske [2Fe-2S] domain BOC52_30925 PF00355 Rieske [2Fe-2S] domain BOC52_30930 PF00999 Sodium/hydrogen exchanger family BOC52_30935 PF04820 Tryptophan halogenase BOC52_31010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BOC52_31010 PF02753 Pili assembly chaperone PapD, C-terminal domain BOC52_31015 PF13954 PapC N-terminal domain BOC52_31015 PF13953 PapC C-terminal domain BOC52_31015 PF00577 Outer membrane usher protein BOC52_31035 PF13018 Extended Signal Peptide of Type V secretion system BOC52_31035 PF05658 Head domain of trimeric autotransporter adhesin BOC52_31035 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_31035 PF03895 YadA-like membrane anchor domain BOC52_31070 PF00072 Response regulator receiver domain BOC52_31070 PF00196 Bacterial regulatory proteins, luxR family BOC52_31075 PF00072 Response regulator receiver domain BOC52_31075 PF09456 RcsC Alpha-Beta-Loop (ABL) BOC52_31075 PF00512 His Kinase A (phospho-acceptor) domain BOC52_31075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_31115 PF01527 Transposase BOC52_31130 PF00816 H-NS histone family BOC52_31135 PF00691 OmpA family BOC52_31135 PF01389 OmpA-like transmembrane domain BOC52_31160 PF00664 ABC transporter transmembrane region BOC52_31160 PF00005 ABC transporter BOC52_31160 PF03412 Peptidase C39 family BOC52_31165 PF00529 HlyD membrane-fusion protein of T1SS BOC52_31165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_31185 PF00072 Response regulator receiver domain BOC52_31185 PF00486 Transcriptional regulatory protein, C terminal BOC52_31220 PF08281 Sigma-70, region 4 BOC52_31220 PF04542 Sigma-70 region 2 BOC52_31225 PF06532 Negative regulator of sigma F BOC52_31245 PF05114 Protein of unknown function (DUF692) BOC52_31260 PF01804 Penicillin amidase BOC52_31265 PF16861 Carbamoyltransferase C-terminus BOC52_31265 PF02543 Carbamoyltransferase N-terminus BOC52_31270 PF00975 Thioesterase domain BOC52_31270 PF00550 Phosphopantetheine attachment site BOC52_31270 PF00668 Condensation domain BOC52_31270 PF13193 AMP-binding enzyme C-terminal domain BOC52_31270 PF00501 AMP-binding enzyme BOC52_31280 PF01212 Beta-eliminating lyase BOC52_31285 PF00206 Lyase BOC52_31285 PF02655 ATP-grasp domain BOC52_31290 PF00291 Pyridoxal-phosphate dependent enzyme BOC52_31310 PF00206 Lyase BOC52_31310 PF14698 Argininosuccinate lyase C-terminal BOC52_31315 PF00764 Arginosuccinate synthase BOC52_31320 PF00551 Formyl transferase BOC52_31320 PF18216 N-formyltransferase dimerization C-terminal domain BOC52_31330 PF00155 Aminotransferase class I and II BOC52_31340 PF01527 Transposase BOC52_31355 PF03621 MbtH-like protein BOC52_31375 PF13609 Gram-negative porin BOC52_31385 PF12852 Cupin BOC52_31385 PF12833 Helix-turn-helix domain BOC52_31390 PF00892 EamA-like transporter family BOC52_31395 PF01584 CheW-like domain BOC52_31400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_31400 PF02203 Tar ligand binding domain homologue BOC52_31400 PF00672 HAMP domain BOC52_31415 PF00501 AMP-binding enzyme BOC52_31415 PF13193 AMP-binding enzyme C-terminal domain BOC52_31420 PF07690 Major Facilitator Superfamily BOC52_31425 PF13649 Methyltransferase domain BOC52_31430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BOC52_31435 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_31440 PF00005 ABC transporter BOC52_31445 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_31460 PF13520 Amino acid permease BOC52_31470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BOC52_31470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BOC52_31475 PF00696 Amino acid kinase family BOC52_31485 PF00106 short chain dehydrogenase BOC52_31485 PF00561 alpha/beta hydrolase fold BOC52_31490 PF03928 Haem-degrading BOC52_31495 PF03466 LysR substrate binding domain BOC52_31495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_31500 PF00043 Glutathione S-transferase, C-terminal domain BOC52_31500 PF02798 Glutathione S-transferase, N-terminal domain BOC52_31515 PF13458 Periplasmic binding protein BOC52_31520 PF01047 MarR family BOC52_31525 PF07690 Major Facilitator Superfamily BOC52_31530 PF02638 Glycosyl hydrolase-like 10 BOC52_31535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_31545 PF02571 Precorrin-6x reductase CbiJ/CobK BOC52_31550 PF01888 CbiD BOC52_31555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_31560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BOC52_31560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BOC52_31565 PF02570 Precorrin-8X methylmutase BOC52_31570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_31575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_31580 PF02839 Carbohydrate binding domain BOC52_31600 PF02230 Phospholipase/Carboxylesterase BOC52_31615 PF13519 von Willebrand factor type A domain BOC52_31615 PF17863 AAA lid domain BOC52_31615 PF07728 AAA domain (dynein-related subfamily) BOC52_31625 PF02514 CobN/Magnesium Chelatase BOC52_31630 PF02492 CobW/HypB/UreG, nucleotide-binding domain BOC52_31630 PF07683 Cobalamin synthesis protein cobW C-terminal domain BOC52_31635 PF03824 High-affinity nickel-transport protein BOC52_31640 PF01890 Cobalamin synthesis G C-terminus BOC52_31645 PF12557 Cob(I)alamin adenosyltransferase N terminal BOC52_31645 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BOC52_31650 PF07685 CobB/CobQ-like glutamine amidotransferase domain BOC52_31650 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BOC52_31660 PF00551 Formyl transferase BOC52_31665 PF00593 TonB dependent receptor BOC52_31665 PF07715 TonB-dependent Receptor Plug Domain BOC52_31670 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BOC52_31675 PF13193 AMP-binding enzyme C-terminal domain BOC52_31675 PF00501 AMP-binding enzyme BOC52_31675 PF00668 Condensation domain BOC52_31675 PF00550 Phosphopantetheine attachment site BOC52_31680 PF13193 AMP-binding enzyme C-terminal domain BOC52_31680 PF00501 AMP-binding enzyme BOC52_31680 PF00550 Phosphopantetheine attachment site BOC52_31680 PF00668 Condensation domain BOC52_31690 PF00664 ABC transporter transmembrane region BOC52_31690 PF00005 ABC transporter BOC52_31705 PF01497 Periplasmic binding protein BOC52_31715 PF01032 FecCD transport family BOC52_31720 PF00005 ABC transporter BOC52_31725 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BOC52_31730 PF03621 MbtH-like protein BOC52_31755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BOC52_31755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BOC52_31770 PF02653 Branched-chain amino acid transport system / permease component BOC52_31775 PF00005 ABC transporter BOC52_31780 PF13407 Periplasmic binding protein domain BOC52_31805 PF00005 ABC transporter BOC52_31805 PF00664 ABC transporter transmembrane region BOC52_31815 PF02753 Pili assembly chaperone PapD, C-terminal domain BOC52_31815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BOC52_31820 PF00577 Outer membrane usher protein BOC52_31820 PF13954 PapC N-terminal domain BOC52_31820 PF13953 PapC C-terminal domain BOC52_31825 PF00419 Fimbrial protein BOC52_31850 PF02321 Outer membrane efflux protein BOC52_31855 PF00873 AcrB/AcrD/AcrF family BOC52_31860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_31860 PF00529 HlyD membrane-fusion protein of T1SS BOC52_31865 PF00440 Bacterial regulatory proteins, tetR family BOC52_31865 PF08361 MAATS-type transcriptional repressor, C-terminal region BOC52_31870 PF01551 Peptidase family M23 BOC52_31870 PF08525 Opacity-associated protein A N-terminal motif BOC52_31870 PF01476 LysM domain BOC52_31880 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_31925 PF00437 Type II/IV secretion system protein BOC52_31940 PF04972 BON domain BOC52_31940 PF00263 Bacterial type II and III secretion system protein BOC52_31940 PF13629 Pilus formation protein N terminal region BOC52_31960 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_31965 PF00005 ABC transporter BOC52_31980 PF00083 Sugar (and other) transporter BOC52_31990 PF04293 SpoVR like protein BOC52_32000 PF08298 PrkA AAA domain BOC52_32000 PF06798 PrkA serine protein kinase C-terminal domain BOC52_32015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_32015 PF00672 HAMP domain BOC52_32015 PF02203 Tar ligand binding domain homologue BOC52_32020 PF00294 pfkB family carbohydrate kinase BOC52_32025 PF00356 Bacterial regulatory proteins, lacI family BOC52_32030 PF02653 Branched-chain amino acid transport system / permease component BOC52_32035 PF00005 ABC transporter BOC52_32040 PF13407 Periplasmic binding protein domain BOC52_32045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_32045 PF03466 LysR substrate binding domain BOC52_32050 PF00005 ABC transporter BOC52_32050 PF12857 TOBE-like domain BOC52_32055 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_32060 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_32075 PF00717 Peptidase S24-like BOC52_32075 PF01726 LexA DNA binding domain BOC52_32100 PF00005 ABC transporter BOC52_32105 PF01061 ABC-2 type transporter BOC52_32120 PF03773 Predicted permease BOC52_32125 PF00248 Aldo/keto reductase family BOC52_32135 PF01638 HxlR-like helix-turn-helix BOC52_32155 PF00375 Sodium:dicarboxylate symporter family BOC52_32165 PF01207 Dihydrouridine synthase (Dus) BOC52_32185 PF03459 TOBE domain BOC52_32195 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_32200 PF00296 Luciferase-like monooxygenase BOC52_32210 PF00378 Enoyl-CoA hydratase/isomerase BOC52_32215 PF00893 Small Multidrug Resistance protein BOC52_32220 PF03928 Haem-degrading BOC52_32235 PF09297 NADH pyrophosphatase zinc ribbon domain BOC52_32235 PF00293 NUDIX domain BOC52_32240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BOC52_32245 PF04376 Arginine-tRNA-protein transferase, N terminus BOC52_32245 PF04377 Arginine-tRNA-protein transferase, C terminus BOC52_32250 PF01180 Dihydroorotate dehydrogenase BOC52_32265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BOC52_32265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BOC52_32270 PF00392 Bacterial regulatory proteins, gntR family BOC52_32270 PF07729 FCD domain BOC52_32275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BOC52_32280 PF01510 N-acetylmuramoyl-L-alanine amidase BOC52_32290 PF00588 SpoU rRNA Methylase family BOC52_32290 PF08032 RNA 2'-O ribose methyltransferase substrate binding BOC52_32295 PF17876 Cold shock domain BOC52_32295 PF08461 Ribonuclease R winged-helix domain BOC52_32295 PF08206 Ribonuclease B OB domain BOC52_32295 PF00773 RNB domain BOC52_32295 PF00575 S1 RNA binding domain BOC52_32310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_32310 PF00672 HAMP domain BOC52_32310 PF02203 Tar ligand binding domain homologue BOC52_32315 PF04185 Phosphoesterase family BOC52_32330 PF01740 STAS domain BOC52_32330 PF00916 Sulfate permease family BOC52_32340 PF13673 Acetyltransferase (GNAT) domain BOC52_32340 PF03352 Methyladenine glycosylase BOC52_32340 PF00117 Glutamine amidotransferase class-I BOC52_32340 PF00958 GMP synthase C terminal domain BOC52_32340 PF13302 Acetyltransferase (GNAT) domain BOC52_32345 PF07690 Major Facilitator Superfamily BOC52_32350 PF00440 Bacterial regulatory proteins, tetR family BOC52_32355 PF00501 AMP-binding enzyme BOC52_32355 PF13193 AMP-binding enzyme C-terminal domain BOC52_32370 PF17209 Hfq protein BOC52_32380 PF00158 Sigma-54 interaction domain BOC52_32380 PF00072 Response regulator receiver domain BOC52_32380 PF02954 Bacterial regulatory protein, Fis family BOC52_32410 PF00437 Type II/IV secretion system protein BOC52_32420 PF00263 Bacterial type II and III secretion system protein BOC52_32420 PF13629 Pilus formation protein N terminal region BOC52_32420 PF04972 BON domain BOC52_32485 PF03969 AFG1-like ATPase BOC52_32490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BOC52_32490 PF07992 Pyridine nucleotide-disulphide oxidoreductase BOC52_32495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BOC52_32495 PF02817 e3 binding domain BOC52_32495 PF00364 Biotin-requiring enzyme BOC52_32500 PF16870 2-oxoglutarate dehydrogenase C-terminal BOC52_32500 PF16078 2-oxoglutarate dehydrogenase N-terminus BOC52_32500 PF02779 Transketolase, pyrimidine binding domain BOC52_32500 PF00676 Dehydrogenase E1 component BOC52_32515 PF01047 MarR family BOC52_32520 PF02321 Outer membrane efflux protein BOC52_32525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_32525 PF00529 HlyD membrane-fusion protein of T1SS BOC52_32530 PF07690 Major Facilitator Superfamily BOC52_32540 PF01509 TruB family pseudouridylate synthase (N terminal domain) BOC52_32540 PF16198 tRNA pseudouridylate synthase B C-terminal domain BOC52_32540 PF09157 Pseudouridine synthase II TruB, C-terminal BOC52_32545 PF02033 Ribosome-binding factor A BOC52_32550 PF11987 Translation-initiation factor 2 BOC52_32550 PF00009 Elongation factor Tu GTP binding domain BOC52_32550 PF04760 Translation initiation factor IF-2, N-terminal region BOC52_32550 PF08364 Bacterial translation initiation factor IF-2 associated region BOC52_32555 PF13184 NusA-like KH domain BOC52_32555 PF08529 NusA N-terminal domain BOC52_32560 PF17384 RimP C-terminal SH3 domain BOC52_32560 PF02576 RimP N-terminal domain BOC52_32565 PF00849 RNA pseudouridylate synthase BOC52_32565 PF01479 S4 domain BOC52_32575 PF03466 LysR substrate binding domain BOC52_32575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_32620 PF06804 NlpB/DapX lipoprotein BOC52_32645 PF01527 Transposase BOC52_32650 PF13333 Integrase core domain BOC52_32650 PF00665 Integrase core domain BOC52_32650 PF13276 HTH-like domain BOC52_32665 PF00216 Bacterial DNA-binding protein BOC52_32670 PF03484 tRNA synthetase B5 domain BOC52_32670 PF03147 Ferredoxin-fold anticodon binding domain BOC52_32670 PF01588 Putative tRNA binding domain BOC52_32670 PF03483 B3/4 domain BOC52_32670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BOC52_32675 PF01409 tRNA synthetases class II core domain (F) BOC52_32675 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BOC52_32680 PF00453 Ribosomal protein L20 BOC52_32685 PF01632 Ribosomal protein L35 BOC52_32690 PF05198 Translation initiation factor IF-3, N-terminal domain BOC52_32690 PF00707 Translation initiation factor IF-3, C-terminal domain BOC52_32695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BOC52_32695 PF02824 TGS domain BOC52_32695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BOC52_32695 PF03129 Anticodon binding domain BOC52_32705 PF02824 TGS domain BOC52_32705 PF04607 Region found in RelA / SpoT proteins BOC52_32705 PF13291 ACT domain BOC52_32710 PF01042 Endoribonuclease L-PSP BOC52_32715 PF12146 Serine aminopeptidase, S33 BOC52_32725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_32725 PF03466 LysR substrate binding domain BOC52_32750 PF01144 Coenzyme A transferase BOC52_32755 PF01144 Coenzyme A transferase BOC52_32810 PF01264 Chorismate synthase BOC52_32820 PF07690 Major Facilitator Superfamily BOC52_32845 PF03631 Virulence factor BrkB BOC52_32850 PF03358 NADPH-dependent FMN reductase BOC52_32860 PF02913 FAD linked oxidases, C-terminal domain BOC52_32860 PF01565 FAD binding domain BOC52_32875 PF03466 LysR substrate binding domain BOC52_32875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_32885 PF02321 Outer membrane efflux protein BOC52_32890 PF04632 Fusaric acid resistance protein family BOC52_32900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_32910 PF00672 HAMP domain BOC52_32910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BOC52_32910 PF02203 Tar ligand binding domain homologue BOC52_32915 PF07690 Major Facilitator Superfamily BOC52_32920 PF01048 Phosphorylase superfamily BOC52_32925 PF00580 UvrD/REP helicase N-terminal domain BOC52_32925 PF13361 UvrD-like helicase C-terminal domain BOC52_32930 PF08264 Anticodon-binding domain of tRNA BOC52_32930 PF00133 tRNA synthetases class I (I, L, M and V) BOC52_32930 PF10458 Valyl tRNA synthetase tRNA binding arm BOC52_32935 PF00483 Nucleotidyl transferase BOC52_32945 PF00512 His Kinase A (phospho-acceptor) domain BOC52_32945 PF14827 Double sensory domain of two-component sensor kinase BOC52_32945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_32945 PF00672 HAMP domain BOC52_32945 PF13426 PAS domain BOC52_32955 PF00072 Response regulator receiver domain BOC52_32955 PF00486 Transcriptional regulatory protein, C terminal BOC52_32965 PF01206 Sulfurtransferase TusA BOC52_32975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BOC52_32975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BOC52_32980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BOC52_32980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BOC52_32985 PF01418 Helix-turn-helix domain, rpiR family BOC52_32985 PF01380 SIS domain BOC52_32995 PF02653 Branched-chain amino acid transport system / permease component BOC52_33000 PF00005 ABC transporter BOC52_33005 PF00294 pfkB family carbohydrate kinase BOC52_33010 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_33010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_33010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_33015 PF01261 Xylose isomerase-like TIM barrel BOC52_33020 PF04962 KduI/IolB family BOC52_33025 PF00005 ABC transporter BOC52_33030 PF00005 ABC transporter BOC52_33030 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_33035 PF02653 Branched-chain amino acid transport system / permease component BOC52_33040 PF03061 Thioesterase superfamily BOC52_33050 PF00465 Iron-containing alcohol dehydrogenase BOC52_33060 PF01906 Putative heavy-metal-binding BOC52_33075 PF13180 PDZ domain BOC52_33085 PF06779 Uncharacterised MFS-type transporter YbfB BOC52_33090 PF03466 LysR substrate binding domain BOC52_33090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_33095 PF02272 DHHA1 domain BOC52_33095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BOC52_33095 PF01411 tRNA synthetases class II (A) BOC52_33100 PF02515 CoA-transferase family III BOC52_33110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BOC52_33110 PF00749 tRNA synthetases class I (E and Q), catalytic domain BOC52_33120 PF00293 NUDIX domain BOC52_33135 PF00933 Glycosyl hydrolase family 3 N terminal domain BOC52_33150 PF00034 Cytochrome c BOC52_33150 PF03150 Di-haem cytochrome c peroxidase BOC52_33155 PF05506 Domain of unknown function (DUF756) BOC52_33155 PF04185 Phosphoesterase family BOC52_33160 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BOC52_33160 PF12241 Trans-2-enoyl-CoA reductase catalytic region BOC52_33160 PF07055 Enoyl reductase FAD binding domain BOC52_33170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BOC52_33170 PF00529 HlyD membrane-fusion protein of T1SS BOC52_33180 PF07690 Major Facilitator Superfamily BOC52_33185 PF02321 Outer membrane efflux protein BOC52_33195 PF00196 Bacterial regulatory proteins, luxR family BOC52_33195 PF00072 Response regulator receiver domain BOC52_33200 PF01627 Hpt domain BOC52_33200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_33200 PF00072 Response regulator receiver domain BOC52_33200 PF00672 HAMP domain BOC52_33200 PF00512 His Kinase A (phospho-acceptor) domain BOC52_33200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BOC52_33250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_33250 PF03466 LysR substrate binding domain BOC52_33260 PF04909 Amidohydrolase BOC52_33290 PF01566 Natural resistance-associated macrophage protein BOC52_33320 PF00665 Integrase core domain BOC52_33320 PF13276 HTH-like domain BOC52_33320 PF13333 Integrase core domain BOC52_33325 PF01527 Transposase BOC52_33395 PF04717 Type VI secretion system, phage-baseplate injector BOC52_33455 PF16671 Actin cross-linking domain BOC52_33455 PF04717 Type VI secretion system, phage-baseplate injector BOC52_33530 PF01389 OmpA-like transmembrane domain BOC52_33530 PF00691 OmpA family BOC52_33535 PF05662 Coiled stalk of trimeric autotransporter adhesin BOC52_33535 PF05658 Head domain of trimeric autotransporter adhesin BOC52_33535 PF03895 YadA-like membrane anchor domain BOC52_33545 PF00072 Response regulator receiver domain BOC52_33545 PF00486 Transcriptional regulatory protein, C terminal BOC52_33560 PF05666 Fels-1 Prophage Protein-like BOC52_33570 PF00072 Response regulator receiver domain BOC52_33570 PF00486 Transcriptional regulatory protein, C terminal BOC52_33575 PF03466 LysR substrate binding domain BOC52_33575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_33610 PF10503 Esterase PHB depolymerase BOC52_33625 PF11896 Domain of unknown function (DUF3416) BOC52_33625 PF00128 Alpha amylase, catalytic domain BOC52_33630 PF00128 Alpha amylase, catalytic domain BOC52_33630 PF16657 Maltogenic Amylase, C-terminal domain BOC52_33640 PF00128 Alpha amylase, catalytic domain BOC52_33640 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BOC52_33645 PF00128 Alpha amylase, catalytic domain BOC52_33645 PF11941 Domain of unknown function (DUF3459) BOC52_33650 PF02446 4-alpha-glucanotransferase BOC52_33655 PF00128 Alpha amylase, catalytic domain BOC52_33675 PF00392 Bacterial regulatory proteins, gntR family BOC52_33675 PF00155 Aminotransferase class I and II BOC52_33680 PF04072 Leucine carboxyl methyltransferase BOC52_33720 PF13356 Arm DNA-binding domain BOC52_33720 PF00589 Phage integrase family BOC52_33755 PF02673 Bacitracin resistance protein BacA BOC52_33770 PF01551 Peptidase family M23 BOC52_33770 PF01476 LysM domain BOC52_33780 PF00501 AMP-binding enzyme BOC52_33780 PF13193 AMP-binding enzyme C-terminal domain BOC52_33795 PF01554 MatE BOC52_33870 PF02541 Ppx/GppA phosphatase family BOC52_33875 PF13089 Polyphosphate kinase N-terminal domain BOC52_33875 PF17941 Polyphosphate kinase C-terminal domain 1 BOC52_33875 PF13090 Polyphosphate kinase C-terminal domain 2 BOC52_33875 PF02503 Polyphosphate kinase middle domain BOC52_33885 PF00989 PAS fold BOC52_33885 PF11808 Phosphate regulon sensor protein PhoR BOC52_33885 PF00512 His Kinase A (phospho-acceptor) domain BOC52_33885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_33890 PF00072 Response regulator receiver domain BOC52_33890 PF00486 Transcriptional regulatory protein, C terminal BOC52_33895 PF01895 PhoU domain BOC52_33900 PF00005 ABC transporter BOC52_33905 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_33910 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_33915 PF12849 PBP superfamily domain BOC52_33925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BOC52_33925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BOC52_33925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BOC52_33925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BOC52_33930 PF00809 Pterin binding enzyme BOC52_33935 PF06480 FtsH Extracellular BOC52_33935 PF17862 AAA+ lid domain BOC52_33935 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_33935 PF01434 Peptidase family M41 BOC52_33940 PF01728 FtsJ-like methyltransferase BOC52_33945 PF01985 CRS1 / YhbY (CRM) domain BOC52_33955 PF03449 Transcription elongation factor, N-terminal BOC52_33955 PF01272 Transcription elongation factor, GreA/GreB, C-term BOC52_33960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BOC52_33960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BOC52_33960 PF02142 MGS-like domain BOC52_33965 PF01810 LysE type translocator BOC52_33970 PF00117 Glutamine amidotransferase class-I BOC52_33970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BOC52_33980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BOC52_33980 PF12833 Helix-turn-helix domain BOC52_34000 PF01464 Transglycosylase SLT domain BOC52_34000 PF01476 LysM domain BOC52_34005 PF16123 Hydroxyacylglutathione hydrolase C-terminus BOC52_34005 PF00753 Metallo-beta-lactamase superfamily BOC52_34010 PF08241 Methyltransferase domain BOC52_34015 PF00075 RNase H BOC52_34020 PF00929 Exonuclease BOC52_34030 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BOC52_34040 PF08946 Osmosensory transporter coiled coil BOC52_34040 PF00083 Sugar (and other) transporter BOC52_34075 PF13091 PLD-like domain BOC52_34080 PF00698 Acyl transferase domain BOC52_34085 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BOC52_34090 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BOC52_34100 PF01039 Carboxyl transferase domain BOC52_34105 PF06857 Malonate decarboxylase delta subunit (MdcD) BOC52_34110 PF16957 Malonate decarboxylase, alpha subunit, transporter BOC52_34130 PF03466 LysR substrate binding domain BOC52_34130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_34145 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BOC52_34145 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BOC52_34170 PF00011 Hsp20/alpha crystallin family BOC52_34185 PF00155 Aminotransferase class I and II BOC52_34185 PF00392 Bacterial regulatory proteins, gntR family BOC52_34220 PF03466 LysR substrate binding domain BOC52_34220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_34230 PF03055 Retinal pigment epithelial membrane protein BOC52_34240 PF01380 SIS domain BOC52_34250 PF01037 Lrp/AsnC ligand binding domain BOC52_34255 PF00155 Aminotransferase class I and II BOC52_34255 PF00392 Bacterial regulatory proteins, gntR family BOC52_34280 PF00072 Response regulator receiver domain BOC52_34280 PF00990 Diguanylate cyclase, GGDEF domain BOC52_34320 PF00356 Bacterial regulatory proteins, lacI family BOC52_34330 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_34345 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_34365 PF00149 Calcineurin-like phosphoesterase BOC52_34385 PF07690 Major Facilitator Superfamily BOC52_34395 PF00892 EamA-like transporter family BOC52_34410 PF00174 Oxidoreductase molybdopterin binding domain BOC52_34415 PF01292 Prokaryotic cytochrome b561 BOC52_34435 PF13333 Integrase core domain BOC52_34435 PF00665 Integrase core domain BOC52_34435 PF13276 HTH-like domain BOC52_34440 PF01527 Transposase BOC52_34450 PF01964 Radical SAM ThiC family BOC52_34450 PF13667 ThiC-associated domain BOC52_34480 PF12792 CSS motif domain associated with EAL BOC52_34480 PF00563 EAL domain BOC52_34485 PF00472 RF-1 domain BOC52_34490 PF13538 UvrD-like helicase C-terminal domain BOC52_34495 PF00580 UvrD/REP helicase N-terminal domain BOC52_34495 PF12705 PD-(D/E)XK nuclease superfamily BOC52_34495 PF13361 UvrD-like helicase C-terminal domain BOC52_34500 PF17946 RecC C-terminal domain BOC52_34515 PF12805 FUSC-like inner membrane protein yccS BOC52_34525 PF00324 Amino acid permease BOC52_34540 PF13416 Bacterial extracellular solute-binding protein BOC52_34545 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_34550 PF08402 TOBE domain BOC52_34550 PF00005 ABC transporter BOC52_34555 PF01037 Lrp/AsnC ligand binding domain BOC52_34555 PF13404 AsnC-type helix-turn-helix domain BOC52_34570 PF01370 NAD dependent epimerase/dehydratase family BOC52_34570 PF00391 PEP-utilising enzyme, mobile domain BOC52_34575 PF02082 Transcriptional regulator BOC52_34605 PF13533 Biotin-lipoyl like BOC52_34610 PF00873 AcrB/AcrD/AcrF family BOC52_34615 PF00873 AcrB/AcrD/AcrF family BOC52_34635 PF00578 AhpC/TSA family BOC52_34640 PF00990 Diguanylate cyclase, GGDEF domain BOC52_34640 PF00563 EAL domain BOC52_34640 PF03707 Bacterial signalling protein N terminal repeat BOC52_34650 PF00034 Cytochrome c BOC52_34655 PF00115 Cytochrome C and Quinol oxidase polypeptide I BOC52_34670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BOC52_34670 PF00034 Cytochrome c BOC52_34670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BOC52_34675 PF00034 Cytochrome c BOC52_34690 PF17200 Single Cache domain 2 BOC52_34690 PF07730 Histidine kinase BOC52_34705 PF09084 NMT1/THI5 like BOC52_34725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BOC52_34725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BOC52_34725 PF01842 ACT domain BOC52_34730 PF02311 AraC-like ligand binding domain BOC52_34730 PF12833 Helix-turn-helix domain BOC52_34745 PF00557 Metallopeptidase family M24 BOC52_34745 PF01321 Creatinase/Prolidase N-terminal domain BOC52_34795 PF00072 Response regulator receiver domain BOC52_34795 PF00196 Bacterial regulatory proteins, luxR family BOC52_34810 PF00246 Zinc carboxypeptidase BOC52_34810 PF18027 Cytosolic carboxypeptidase N-terminal domain BOC52_34815 PF03883 Peroxide stress protein YaaA BOC52_34825 PF00155 Aminotransferase class I and II BOC52_34835 PF00378 Enoyl-CoA hydratase/isomerase BOC52_34850 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_34850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_34850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_34870 PF01575 MaoC like domain BOC52_34870 PF00171 Aldehyde dehydrogenase family BOC52_34875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_34875 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_34875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_34880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BOC52_34880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BOC52_34880 PF02770 Acyl-CoA dehydrogenase, middle domain BOC52_34890 PF00293 NUDIX domain BOC52_34900 PF00361 Proton-conducting membrane transporter BOC52_34905 PF00361 Proton-conducting membrane transporter BOC52_34905 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BOC52_34910 PF00361 Proton-conducting membrane transporter BOC52_34910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BOC52_34915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BOC52_34920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BOC52_34925 PF12838 4Fe-4S dicluster domain BOC52_34930 PF00146 NADH dehydrogenase BOC52_34935 PF00384 Molybdopterin oxidoreductase BOC52_34935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BOC52_34935 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BOC52_34940 PF10531 SLBB domain BOC52_34940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BOC52_34940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BOC52_34950 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BOC52_34955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BOC52_34960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BOC52_34965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BOC52_34975 PF03840 Preprotein translocase SecG subunit BOC52_34980 PF00121 Triosephosphate isomerase BOC52_34985 PF00550 Phosphopantetheine attachment site BOC52_34985 PF08659 KR domain BOC52_34985 PF02801 Beta-ketoacyl synthase, C-terminal domain BOC52_34985 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_34985 PF00698 Acyl transferase domain BOC52_34985 PF00109 Beta-ketoacyl synthase, N-terminal domain BOC52_34985 PF14765 Polyketide synthase dehydratase BOC52_34985 PF16197 Ketoacyl-synthetase C-terminal extension BOC52_34990 PF00013 KH domain BOC52_34990 PF00575 S1 RNA binding domain BOC52_34990 PF03725 3' exoribonuclease family, domain 2 BOC52_34990 PF01138 3' exoribonuclease family, domain 1 BOC52_34990 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BOC52_35000 PF00312 Ribosomal protein S15 BOC52_35005 PF13458 Periplasmic binding protein BOC52_35020 PF00484 Carbonic anhydrase BOC52_35025 PF01740 STAS domain BOC52_35025 PF00916 Sulfate permease family BOC52_35030 PF08502 LeuA allosteric (dimerisation) domain BOC52_35030 PF00682 HMGL-like BOC52_35040 PF01066 CDP-alcohol phosphatidyltransferase BOC52_35045 PF02666 Phosphatidylserine decarboxylase BOC52_35050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BOC52_35050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BOC52_35055 PF10369 Small subunit of acetolactate synthase BOC52_35060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BOC52_35060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BOC52_35060 PF00205 Thiamine pyrophosphate enzyme, central domain BOC52_35090 PF00534 Glycosyl transferases group 1 BOC52_35090 PF13439 Glycosyltransferase Family 4 BOC52_35095 PF01219 Prokaryotic diacylglycerol kinase BOC52_35100 PF00440 Bacterial regulatory proteins, tetR family BOC52_35100 PF08360 QacR-like protein, C-terminal region BOC52_35105 PF03641 Possible lysine decarboxylase BOC52_35120 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BOC52_35125 PF07690 Major Facilitator Superfamily BOC52_35130 PF01425 Amidase BOC52_35140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BOC52_35140 PF01411 tRNA synthetases class II (A) BOC52_35140 PF02272 DHHA1 domain BOC52_35160 PF00893 Small Multidrug Resistance protein BOC52_35170 PF00072 Response regulator receiver domain BOC52_35170 PF00486 Transcriptional regulatory protein, C terminal BOC52_35175 PF00512 His Kinase A (phospho-acceptor) domain BOC52_35175 PF13493 Domain of unknown function (DUF4118) BOC52_35175 PF02702 Osmosensitive K+ channel His kinase sensor domain BOC52_35175 PF13492 GAF domain BOC52_35175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_35185 PF02669 K+-transporting ATPase, c chain BOC52_35195 PF03814 Potassium-transporting ATPase A subunit BOC52_35210 PF00107 Zinc-binding dehydrogenase BOC52_35210 PF08240 Alcohol dehydrogenase GroES-like domain BOC52_35220 PF02142 MGS-like domain BOC52_35240 PF01709 Transcriptional regulator BOC52_35245 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BOC52_35245 PF02844 Phosphoribosylglycinamide synthetase, N domain BOC52_35245 PF02843 Phosphoribosylglycinamide synthetase, C domain BOC52_35250 PF01218 Coproporphyrinogen III oxidase BOC52_35255 PF01467 Cytidylyltransferase-like BOC52_35265 PF02590 Predicted SPOUT methyltransferase BOC52_35270 PF02545 Maf-like protein BOC52_35275 PF10150 Ribonuclease E/G family BOC52_35275 PF00575 S1 RNA binding domain BOC52_35285 PF00860 Permease family BOC52_35340 PF08281 Sigma-70, region 4 BOC52_35340 PF04542 Sigma-70 region 2 BOC52_35340 PF12680 SnoaL-like domain BOC52_35350 PF02627 Carboxymuconolactone decarboxylase family BOC52_35365 PF07690 Major Facilitator Superfamily BOC52_35385 PF00535 Glycosyl transferase family 2 BOC52_35395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BOC52_35400 PF00534 Glycosyl transferases group 1 BOC52_35400 PF13439 Glycosyltransferase Family 4 BOC52_35415 PF13439 Glycosyltransferase Family 4 BOC52_35415 PF00534 Glycosyl transferases group 1 BOC52_35420 PF00005 ABC transporter BOC52_35420 PF00664 ABC transporter transmembrane region BOC52_35425 PF02811 PHP domain BOC52_35425 PF07733 Bacterial DNA polymerase III alpha NTPase domain BOC52_35425 PF01336 OB-fold nucleic acid binding domain BOC52_35425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BOC52_35425 PF14579 Helix-hairpin-helix motif BOC52_35440 PF00749 tRNA synthetases class I (E and Q), catalytic domain BOC52_35445 PF00270 DEAD/DEAH box helicase BOC52_35445 PF00271 Helicase conserved C-terminal domain BOC52_35455 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BOC52_35465 PF01370 NAD dependent epimerase/dehydratase family BOC52_35465 PF02222 ATP-grasp domain BOC52_35480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BOC52_35480 PF17854 FtsK alpha domain BOC52_35480 PF01580 FtsK/SpoIIIE family BOC52_35480 PF09397 Ftsk gamma domain BOC52_35485 PF10282 Lactonase, 7-bladed beta-propeller BOC52_35495 PF00723 Glycosyl hydrolases family 15 BOC52_35505 PF00440 Bacterial regulatory proteins, tetR family BOC52_35505 PF17938 Tetracyclin repressor-like, C-terminal domain BOC52_35515 PF00730 HhH-GPD superfamily base excision DNA repair protein BOC52_35515 PF00633 Helix-hairpin-helix motif BOC52_35515 PF10576 Iron-sulfur binding domain of endonuclease III BOC52_35520 PF00892 EamA-like transporter family BOC52_35530 PF00034 Cytochrome c BOC52_35535 PF00034 Cytochrome c BOC52_35540 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_35540 PF02861 Clp amino terminal domain, pathogenicity island component BOC52_35540 PF07724 AAA domain (Cdc48 subfamily) BOC52_35540 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_35540 PF17871 AAA lid domain BOC52_35550 PF03594 Benzoate membrane transport protein BOC52_35560 PF00923 Transaldolase/Fructose-6-phosphate aldolase BOC52_35565 PF06983 3-demethylubiquinone-9 3-methyltransferase BOC52_35570 PF00474 Sodium:solute symporter family BOC52_35580 PF13847 Methyltransferase domain BOC52_35590 PF04345 Chorismate lyase BOC52_35595 PF00183 Hsp90 protein BOC52_35595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_35600 PF00155 Aminotransferase class I and II BOC52_35610 PF00892 EamA-like transporter family BOC52_35615 PF00155 Aminotransferase class I and II BOC52_35625 PF02567 Phenazine biosynthesis-like protein BOC52_35630 PF00563 EAL domain BOC52_35630 PF03707 Bacterial signalling protein N terminal repeat BOC52_35630 PF00990 Diguanylate cyclase, GGDEF domain BOC52_35645 PF00850 Histone deacetylase domain BOC52_35655 PF01546 Peptidase family M20/M25/M40 BOC52_35655 PF07687 Peptidase dimerisation domain BOC52_35660 PF00083 Sugar (and other) transporter BOC52_35660 PF07690 Major Facilitator Superfamily BOC52_35670 PF03466 LysR substrate binding domain BOC52_35670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_35680 PF03466 LysR substrate binding domain BOC52_35680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_35705 PF00521 DNA gyrase/topoisomerase IV, subunit A BOC52_35710 PF00986 DNA gyrase B subunit, carboxyl terminus BOC52_35710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_35710 PF01751 Toprim domain BOC52_35710 PF00204 DNA gyrase B BOC52_35725 PF00301 Rubredoxin BOC52_35745 PF01176 Translation initiation factor 1A / IF-1 BOC52_35785 PF08401 Domain of unknown function (DUF1738) BOC52_35785 PF13362 Toprim domain BOC52_35785 PF18818 Metallopeptidase superfamily domain BOC52_35810 PF00239 Resolvase, N terminal domain BOC52_35810 PF02796 Helix-turn-helix domain of resolvase BOC52_35825 PF02371 Transposase IS116/IS110/IS902 family BOC52_35825 PF01548 Transposase BOC52_35830 PF07929 Plasmid pRiA4b ORF-3-like protein BOC52_35835 PF13007 Transposase C of IS166 homeodomain BOC52_35835 PF13005 zinc-finger binding domain of transposase IS66 BOC52_35835 PF13817 IS66 C-terminal element BOC52_35835 PF03050 Transposase IS66 family BOC52_35840 PF05717 IS66 Orf2 like protein BOC52_35850 PF01527 Transposase BOC52_35875 PF17287 POTRA domain BOC52_35875 PF08479 POTRA domain, ShlB-type BOC52_35875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_35890 PF05860 haemagglutination activity domain BOC52_35890 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BOC52_35890 PF13332 Hemagglutinin repeat BOC52_35890 PF13018 Extended Signal Peptide of Type V secretion system BOC52_35890 PF05594 Haemagluttinin repeat BOC52_35910 PF00768 D-alanyl-D-alanine carboxypeptidase BOC52_35915 PF03974 Ecotin BOC52_35950 PF01161 Phosphatidylethanolamine-binding protein BOC52_35955 PF07690 Major Facilitator Superfamily BOC52_35975 PF00982 Glycosyltransferase family 20 BOC52_36020 PF01527 Transposase BOC52_36025 PF13276 HTH-like domain BOC52_36025 PF00665 Integrase core domain BOC52_36025 PF13333 Integrase core domain BOC52_36035 PF00012 Hsp70 protein BOC52_36040 PF05643 Putative bacterial lipoprotein (DUF799) BOC52_36050 PF03783 Curli production assembly/transport component CsgG BOC52_36065 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BOC52_36065 PF08479 POTRA domain, ShlB-type BOC52_36065 PF17287 POTRA domain BOC52_36085 PF00665 Integrase core domain BOC52_36090 PF01695 IstB-like ATP binding protein BOC52_36100 PF00005 ABC transporter BOC52_36105 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_36120 PF00512 His Kinase A (phospho-acceptor) domain BOC52_36120 PF00672 HAMP domain BOC52_36120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BOC52_36135 PF02678 Pirin BOC52_36135 PF17954 Quercetinase C-terminal cupin domain BOC52_36145 PF00497 Bacterial extracellular solute-binding proteins, family 3 BOC52_36150 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_36155 PF00528 Binding-protein-dependent transport system inner membrane component BOC52_36160 PF00005 ABC transporter BOC52_36165 PF13609 Gram-negative porin BOC52_36170 PF00543 Nitrogen regulatory protein P-II BOC52_36175 PF02540 NAD synthase BOC52_36175 PF00795 Carbon-nitrogen hydrolase BOC52_36190 PF14310 Fibronectin type III-like domain BOC52_36190 PF00933 Glycosyl hydrolase family 3 N terminal domain BOC52_36190 PF01915 Glycosyl hydrolase family 3 C-terminal domain BOC52_36205 PF00719 Inorganic pyrophosphatase BOC52_36210 PF00171 Aldehyde dehydrogenase family BOC52_36220 PF07690 Major Facilitator Superfamily BOC52_36235 PF02602 Uroporphyrinogen-III synthase HemD BOC52_36240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BOC52_36240 PF03900 Porphobilinogen deaminase, C-terminal domain BOC52_36250 PF00311 Phosphoenolpyruvate carboxylase BOC52_36260 PF08241 Methyltransferase domain BOC52_36295 PF00206 Lyase BOC52_36295 PF14698 Argininosuccinate lyase C-terminal BOC52_36300 PF13419 Haloacid dehalogenase-like hydrolase BOC52_36310 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BOC52_36310 PF01276 Orn/Lys/Arg decarboxylase, major domain BOC52_36310 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BOC52_36315 PF00692 dUTPase BOC52_36325 PF10609 NUBPL iron-transfer P-loop NTPase BOC52_36330 PF05736 OprF membrane domain BOC52_36330 PF00691 OmpA family BOC52_36335 PF09334 tRNA synthetases class I (M) BOC52_36335 PF01588 Putative tRNA binding domain BOC52_36340 PF00891 O-methyltransferase domain BOC52_36340 PF16864 Dimerisation domain BOC52_36355 PF04357 TamB, inner membrane protein subunit of TAM complex BOC52_36360 PF07244 Surface antigen variable number repeat BOC52_36360 PF01103 Surface antigen BOC52_36360 PF17243 POTRA domain TamA domain 1 BOC52_36370 PF02616 Segregation and condensation protein ScpA BOC52_36385 PF02569 Pantoate-beta-alanine ligase BOC52_36390 PF02261 Aspartate decarboxylase BOC52_36395 PF10609 NUBPL iron-transfer P-loop NTPase BOC52_36400 PF07681 DoxX BOC52_36405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BOC52_36405 PF07685 CobB/CobQ-like glutamine amidotransferase domain BOC52_36410 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BOC52_36415 PF17113 Regulatory signalling modulator protein AmpE BOC52_36415 PF03186 CobD/Cbib protein BOC52_36420 PF00155 Aminotransferase class I and II BOC52_36425 PF01497 Periplasmic binding protein BOC52_36440 PF02654 Cobalamin-5-phosphate synthase BOC52_36445 PF02277 Phosphoribosyltransferase BOC52_36455 PF01032 FecCD transport family BOC52_36460 PF07715 TonB-dependent Receptor Plug Domain BOC52_36460 PF00593 TonB dependent receptor BOC52_36470 PF05164 Cell division protein ZapA BOC52_36490 PF01790 Prolipoprotein diacylglyceryl transferase BOC52_36495 PF03466 LysR substrate binding domain BOC52_36495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_36505 PF00920 Dehydratase family BOC52_36510 PF00034 Cytochrome c BOC52_36520 PF04364 DNA polymerase III chi subunit, HolC BOC52_36525 PF00883 Cytosol aminopeptidase family, catalytic domain BOC52_36525 PF02789 Cytosol aminopeptidase family, N-terminal domain BOC52_36530 PF03739 Lipopolysaccharide export system permease LptF/LptG BOC52_36545 PF10414 Sirohaem synthase dimerisation region BOC52_36545 PF14824 Sirohaem biosynthesis protein central BOC52_36545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BOC52_36550 PF00009 Elongation factor Tu GTP binding domain BOC52_36555 PF01507 Phosphoadenosine phosphosulfate reductase family BOC52_36560 PF01507 Phosphoadenosine phosphosulfate reductase family BOC52_36575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_36575 PF03466 LysR substrate binding domain BOC52_36590 PF00589 Phage integrase family BOC52_36590 PF13356 Arm DNA-binding domain BOC52_36595 PF08401 Domain of unknown function (DUF1738) BOC52_36595 PF18818 Metallopeptidase superfamily domain BOC52_36595 PF13362 Toprim domain BOC52_36655 PF02796 Helix-turn-helix domain of resolvase BOC52_36655 PF00239 Resolvase, N terminal domain BOC52_36665 PF01381 Helix-turn-helix BOC52_36665 PF08671 Anti-repressor SinI BOC52_36670 PF00596 Class II Aldolase and Adducin N-terminal domain BOC52_36675 PF00701 Dihydrodipicolinate synthetase family BOC52_36680 PF03473 MOSC domain BOC52_36680 PF03475 3-alpha domain BOC52_36685 PF00561 alpha/beta hydrolase fold BOC52_36690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_36690 PF03466 LysR substrate binding domain BOC52_36695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BOC52_36695 PF03466 LysR substrate binding domain BOC52_36705 PF01479 S4 domain BOC52_36705 PF00849 RNA pseudouridylate synthase BOC52_36720 PF00111 2Fe-2S iron-sulfur cluster binding domain BOC52_36720 PF00175 Oxidoreductase NAD-binding domain BOC52_36720 PF00970 Oxidoreductase FAD-binding domain BOC52_36725 PF00202 Aminotransferase class-III BOC52_36730 PF00583 Acetyltransferase (GNAT) family BOC52_36745 PF00005 ABC transporter BOC52_36750 PF00005 ABC transporter BOC52_36750 PF12399 Branched-chain amino acid ATP-binding cassette transporter BOC52_36755 PF11862 Domain of unknown function (DUF3382) BOC52_36755 PF02653 Branched-chain amino acid transport system / permease component BOC52_36760 PF02653 Branched-chain amino acid transport system / permease component BOC52_36770 PF02401 LytB protein BOC52_36775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BOC52_36780 PF04002 RadC-like JAB domain BOC52_36785 PF00830 Ribosomal L28 family BOC52_36790 PF00471 Ribosomal protein L33 BOC52_36795 PF00890 FAD binding domain BOC52_36795 PF02910 Fumarate reductase flavoprotein C-term BOC52_36805 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BOC52_36805 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BOC52_36810 PF02445 Quinolinate synthetase A protein BOC52_36820 PF00924 Mechanosensitive ion channel BOC52_36820 PF12794 Mechanosensitive ion channel inner membrane domain 1 BOC52_36820 PF12795 Mechanosensitive ion channel porin domain BOC52_36825 PF01189 16S rRNA methyltransferase RsmB/F BOC52_36825 PF01029 NusB family BOC52_36830 PF00551 Formyl transferase BOC52_36835 PF06574 FAD synthetase BOC52_36835 PF01687 Riboflavin kinase BOC52_36840 PF06827 Zinc finger found in FPG and IleRS BOC52_36840 PF00133 tRNA synthetases class I (I, L, M and V) BOC52_36840 PF08264 Anticodon-binding domain of tRNA BOC52_36845 PF01252 Signal peptidase (SPase) II BOC52_36850 PF02441 Flavoprotein BOC52_36850 PF04127 DNA / pantothenate metabolism flavoprotein BOC52_36855 PF00692 dUTPase BOC52_36870 PF00324 Amino acid permease BOC52_36875 PF00004 ATPase family associated with various cellular activities (AAA) BOC52_36875 PF07724 AAA domain (Cdc48 subfamily) BOC52_36875 PF17871 AAA lid domain BOC52_36875 PF02861 Clp amino terminal domain, pathogenicity island component BOC52_36875 PF10431 C-terminal, D2-small domain, of ClpB protein BOC52_36880 PF02617 ATP-dependent Clp protease adaptor protein ClpS BOC52_36885 PF00313 'Cold-shock' DNA-binding domain BOC52_36890 PF07732 Multicopper oxidase BOC52_36890 PF07731 Multicopper oxidase BOC52_36900 PF00180 Isocitrate/isopropylmalate dehydrogenase BOC52_36905 PF00849 RNA pseudouridylate synthase BOC52_36920 PF03764 Elongation factor G, domain IV BOC52_36920 PF00009 Elongation factor Tu GTP binding domain BOC52_36920 PF00679 Elongation factor G C-terminus BOC52_36920 PF03144 Elongation factor Tu domain 2 BOC52_36920 PF14492 Elongation Factor G, domain II BOC52_36955 PF00248 Aldo/keto reductase family BOC52_36960 PF00392 Bacterial regulatory proteins, gntR family BOC52_36960 PF07702 UTRA domain BOC52_36970 PF00285 Citrate synthase, C-terminal domain BOC52_36980 PF07690 Major Facilitator Superfamily BOC52_37040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BOC52_37040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BOC52_37055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BOC52_37060 PF03966 Trm112p-like protein BOC52_37065 PF02348 Cytidylyltransferase BOC52_37075 PF05191 Adenylate kinase, active site lid BOC52_37080 PF00106 short chain dehydrogenase BOC52_37090 PF13369 Transglutaminase-like superfamily BOC52_37095 PF03023 Lipid II flippase MurJ BOC52_37105 PF01649 Ribosomal protein S20