locus-tag class description WT60_00005 PF00308 Bacterial dnaA protein WT60_00005 PF08299 Bacterial dnaA protein helix-turn-helix WT60_00005 PF11638 DnaA N-terminal domain WT60_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain WT60_00010 PF02767 DNA polymerase III beta subunit, central domain WT60_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain WT60_00015 PF00204 DNA gyrase B WT60_00015 PF00986 DNA gyrase B subunit, carboxyl terminus WT60_00015 PF18053 DNA gyrase B subunit insert domain WT60_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_00015 PF01751 Toprim domain WT60_00030 PF00199 Catalase WT60_00035 PF04542 Sigma-70 region 2 WT60_00035 PF08281 Sigma-70, region 4 WT60_00070 PF04542 Sigma-70 region 2 WT60_00070 PF08281 Sigma-70, region 4 WT60_00080 PF02515 CoA-transferase family III WT60_00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WT60_00085 PF00378 Enoyl-CoA hydratase/isomerase WT60_00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WT60_00090 PF00108 Thiolase, N-terminal domain WT60_00090 PF02803 Thiolase, C-terminal domain WT60_00095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_00095 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_00095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_00120 PF03551 Transcriptional regulator PadR-like family WT60_00155 PF00732 GMC oxidoreductase WT60_00155 PF05199 GMC oxidoreductase WT60_00165 PF10703 MoaF N-terminal domain WT60_00165 PF17409 MoaF C-terminal domain WT60_00175 PF00171 Aldehyde dehydrogenase family WT60_00190 PF02653 Branched-chain amino acid transport system / permease component WT60_00190 PF11862 Domain of unknown function (DUF3382) WT60_00195 PF00005 ABC transporter WT60_00195 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_00205 PF00005 ABC transporter WT60_00215 PF13609 Gram-negative porin WT60_00220 PF04851 Type III restriction enzyme, res subunit WT60_00220 PF08774 VRR-NUC domain WT60_00225 PF18273 Type III R-M EcoP15I C-terminal domain WT60_00225 PF01555 DNA methylase WT60_00230 PF13609 Gram-negative porin WT60_00235 PF00486 Transcriptional regulatory protein, C terminal WT60_00235 PF00072 Response regulator receiver domain WT60_00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_00240 PF00512 His Kinase A (phospho-acceptor) domain WT60_00245 PF00528 Binding-protein-dependent transport system inner membrane component WT60_00250 PF00005 ABC transporter WT60_00260 PF01311 Bacterial export proteins, family 1 WT60_00265 PF01313 Bacterial export proteins, family 3 WT60_00270 PF00813 FliP family WT60_00275 PF04347 Flagellar biosynthesis protein, FliO WT60_00280 PF16973 Flagellar motor switch protein FliN N-terminal WT60_00280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WT60_00285 PF02154 Flagellar motor switch protein FliM WT60_00285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WT60_00295 PF04172 LrgB-like family WT60_00300 PF03788 LrgA family WT60_00305 PF03466 LysR substrate binding domain WT60_00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_00310 PF07690 Major Facilitator Superfamily WT60_00315 PF01047 MarR family WT60_00325 PF02321 Outer membrane efflux protein WT60_00375 PF08334 Type II secretion system (T2SS), protein G WT60_00375 PF07963 Prokaryotic N-terminal methylation motif WT60_00385 PF00482 Type II secretion system (T2SS), protein F WT60_00390 PF00437 Type II/IV secretion system protein WT60_00395 PF03958 Bacterial type II/III secretion system short domain WT60_00395 PF00263 Bacterial type II and III secretion system protein WT60_00400 PF01464 Transglycosylase SLT domain WT60_00405 PF07683 Cobalamin synthesis protein cobW C-terminal domain WT60_00405 PF02492 CobW/HypB/UreG, nucleotide-binding domain WT60_00410 PF00216 Bacterial DNA-binding protein WT60_00415 PF01266 FAD dependent oxidoreductase WT60_00415 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WT60_00430 PF04107 Glutamate-cysteine ligase family 2(GCS2) WT60_00440 PF00958 GMP synthase C terminal domain WT60_00440 PF00117 Glutamine amidotransferase class-I WT60_00440 PF02540 NAD synthase WT60_00445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_00455 PF08521 Two-component sensor kinase N-terminal WT60_00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_00455 PF00512 His Kinase A (phospho-acceptor) domain WT60_00460 PF00486 Transcriptional regulatory protein, C terminal WT60_00460 PF00072 Response regulator receiver domain WT60_00465 PF01329 Pterin 4 alpha carbinolamine dehydratase WT60_00470 PF00351 Biopterin-dependent aromatic amino acid hydroxylase WT60_00475 PF01037 Lrp/AsnC ligand binding domain WT60_00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_00490 PF03466 LysR substrate binding domain WT60_00495 PF00171 Aldehyde dehydrogenase family WT60_00500 PF00732 GMC oxidoreductase WT60_00500 PF05199 GMC oxidoreductase WT60_00505 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_00505 PF00005 ABC transporter WT60_00510 PF00005 ABC transporter WT60_00520 PF02653 Branched-chain amino acid transport system / permease component WT60_00545 PF00005 ABC transporter WT60_00545 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_00550 PF00005 ABC transporter WT60_00555 PF13932 GidA associated domain WT60_00555 PF01134 Glucose inhibited division protein A WT60_00560 PF02527 rRNA small subunit methyltransferase G WT60_00565 PF13614 AAA domain WT60_00570 PF02195 ParB-like nuclease domain WT60_00570 PF17762 HTH domain found in ParB protein WT60_00575 PF03600 Citrate transporter WT60_00585 PF00119 ATP synthase A chain WT60_00590 PF00137 ATP synthase subunit C WT60_00595 PF00430 ATP synthase B/B' CF(0) WT60_00600 PF00213 ATP synthase delta (OSCP) subunit WT60_00605 PF02874 ATP synthase alpha/beta family, beta-barrel domain WT60_00605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WT60_00605 PF00306 ATP synthase alpha/beta chain, C terminal domain WT60_00610 PF00231 ATP synthase WT60_00615 PF02874 ATP synthase alpha/beta family, beta-barrel domain WT60_00615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WT60_00620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain WT60_00620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WT60_00625 PF13193 AMP-binding enzyme C-terminal domain WT60_00625 PF00501 AMP-binding enzyme WT60_00630 PF13380 CoA binding domain WT60_00635 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_00640 PF01208 Uroporphyrinogen decarboxylase (URO-D) WT60_00645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WT60_00645 PF18074 Primosomal protein N C-terminal domain WT60_00645 PF17764 3′ DNA-binding domain (3′BD) WT60_00645 PF00271 Helicase conserved C-terminal domain WT60_00645 PF00270 DEAD/DEAH box helicase WT60_00650 PF01619 Proline dehydrogenase WT60_00650 PF00171 Aldehyde dehydrogenase family WT60_00650 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WT60_00650 PF14850 DNA-binding domain of Proline dehydrogenase WT60_00655 PF13458 Periplasmic binding protein WT60_00660 PF00501 AMP-binding enzyme WT60_00660 PF13193 AMP-binding enzyme C-terminal domain WT60_00665 PF18158 Adaptive response protein AidB N-terminal domain WT60_00665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_00665 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_00675 PF00155 Aminotransferase class I and II WT60_00680 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_00685 PF01565 FAD binding domain WT60_00685 PF02913 FAD linked oxidases, C-terminal domain WT60_00695 PF13411 MerR HTH family regulatory protein WT60_00700 PF00403 Heavy-metal-associated domain WT60_00710 PF05552 Conserved TM helix WT60_00725 PF13520 Amino acid permease WT60_00730 PF06751 Ethanolamine ammonia lyase large subunit (EutB) WT60_00735 PF05985 Ethanolamine ammonia-lyase light chain (EutC) WT60_00740 PF00171 Aldehyde dehydrogenase family WT60_00745 PF12833 Helix-turn-helix domain WT60_00755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_00755 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_00755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_00765 PF03315 Serine dehydratase beta chain WT60_00765 PF03313 Serine dehydratase alpha chain WT60_00780 PF02347 Glycine cleavage system P-protein WT60_00785 PF01597 Glycine cleavage H-protein WT60_00790 PF01571 Aminomethyltransferase folate-binding domain WT60_00790 PF08669 Glycine cleavage T-protein C-terminal barrel domain WT60_00800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WT60_00800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WT60_00810 PF13361 UvrD-like helicase C-terminal domain WT60_00810 PF00580 UvrD/REP helicase N-terminal domain WT60_00815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WT60_00865 PF03958 Bacterial type II/III secretion system short domain WT60_00865 PF00263 Bacterial type II and III secretion system protein WT60_00875 PF00589 Phage integrase family WT60_00890 PF13005 zinc-finger binding domain of transposase IS66 WT60_00890 PF03050 Transposase IS66 family WT60_00890 PF13817 IS66 C-terminal element WT60_00890 PF13007 Transposase C of IS166 homeodomain WT60_00895 PF05717 IS66 Orf2 like protein WT60_00915 PF13276 HTH-like domain WT60_00915 PF13683 Integrase core domain WT60_00920 PF01527 Transposase WT60_00930 PF00145 C-5 cytosine-specific DNA methylase WT60_00935 PF03852 DNA mismatch endonuclease Vsr WT60_00960 PF05717 IS66 Orf2 like protein WT60_00965 PF13005 zinc-finger binding domain of transposase IS66 WT60_00965 PF13817 IS66 C-terminal element WT60_00965 PF03050 Transposase IS66 family WT60_00965 PF13007 Transposase C of IS166 homeodomain WT60_00970 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA WT60_00975 PF15935 RNase LS, bacterial toxin WT60_00980 PF02371 Transposase IS116/IS110/IS902 family WT60_00980 PF01548 Transposase WT60_01015 PF13007 Transposase C of IS166 homeodomain WT60_01015 PF13005 zinc-finger binding domain of transposase IS66 WT60_01015 PF03050 Transposase IS66 family WT60_01015 PF13817 IS66 C-terminal element WT60_01020 PF05717 IS66 Orf2 like protein WT60_01030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading WT60_01030 PF18416 N-acetylglucosamine binding protein domain 2 WT60_01035 PF01565 FAD binding domain WT60_01035 PF08031 Berberine and berberine like WT60_01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_01045 PF02203 Tar ligand binding domain homologue WT60_01045 PF00672 HAMP domain WT60_01050 PF12697 Alpha/beta hydrolase family WT60_01060 PF04185 Phosphoesterase family WT60_01090 PF08889 WbqC-like protein family WT60_01095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WT60_01110 PF07196 Flagellin hook IN motif WT60_01110 PF07195 Flagellar hook-associated protein 2 C-terminus WT60_01110 PF02465 Flagellar hook-associated protein 2 N-terminus WT60_01115 PF00700 Bacterial flagellin C-terminal helical region WT60_01115 PF00669 Bacterial flagellin N-terminal helical region WT60_01120 PF01165 Ribosomal protein S21 WT60_01125 PF00117 Glutamine amidotransferase class-I WT60_01125 PF00958 GMP synthase C terminal domain WT60_01125 PF03352 Methyladenine glycosylase WT60_01125 PF13302 Acetyltransferase (GNAT) domain WT60_01125 PF13673 Acetyltransferase (GNAT) domain WT60_01140 PF00230 Major intrinsic protein WT60_01150 PF13439 Glycosyltransferase Family 4 WT60_01155 PF05247 Flagellar transcriptional activator (FlhD) WT60_01160 PF05280 Flagellar transcriptional activator (FlhC) WT60_01165 PF01618 MotA/TolQ/ExbB proton channel family WT60_01170 PF00691 OmpA family WT60_01170 PF13677 Membrane MotB of proton-channel complex MotA/MotB WT60_01175 PF01339 CheB methylesterase WT60_01175 PF00072 Response regulator receiver domain WT60_01180 PF02895 Signal transducing histidine kinase, homodimeric domain WT60_01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_01180 PF01627 Hpt domain WT60_01180 PF09078 CheY binding WT60_01180 PF01584 CheW-like domain WT60_01185 PF01584 CheW-like domain WT60_01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_01190 PF02203 Tar ligand binding domain homologue WT60_01190 PF00672 HAMP domain WT60_01195 PF03705 CheR methyltransferase, all-alpha domain WT60_01195 PF01739 CheR methyltransferase, SAM binding domain WT60_01200 PF03975 CheD chemotactic sensory transduction WT60_01205 PF01339 CheB methylesterase WT60_01205 PF00072 Response regulator receiver domain WT60_01210 PF00072 Response regulator receiver domain WT60_01215 PF04344 Chemotaxis phosphatase, CheZ WT60_01240 PF01312 FlhB HrpN YscU SpaS Family WT60_01245 PF00771 FHIPEP family WT60_01250 PF00448 SRP54-type protein, GTPase domain WT60_01255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WT60_01260 PF04542 Sigma-70 region 2 WT60_01260 PF04539 Sigma-70 region 3 WT60_01260 PF04545 Sigma-70, region 4 WT60_01265 PF05221 S-adenosyl-L-homocysteine hydrolase WT60_01265 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WT60_01270 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV WT60_01275 PF02219 Methylenetetrahydrofolate reductase WT60_01280 PF01425 Amidase WT60_01285 PF01738 Dienelactone hydrolase family WT60_01290 PF03060 Nitronate monooxygenase WT60_01295 PF13458 Periplasmic binding protein WT60_01300 PF07690 Major Facilitator Superfamily WT60_01320 PF01037 Lrp/AsnC ligand binding domain WT60_01330 PF00753 Metallo-beta-lactamase superfamily WT60_01335 PF05036 Sporulation related domain WT60_01335 PF03330 Lytic transglycolase WT60_01340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_01345 PF02021 Uncharacterised protein family UPF0102 WT60_01350 PF13580 SIS domain WT60_01355 PF04972 BON domain WT60_01360 PF00034 Cytochrome c WT60_01370 PF00324 Amino acid permease WT60_01380 PF00005 ABC transporter WT60_01385 PF01032 FecCD transport family WT60_01390 PF00756 Putative esterase WT60_01405 PF07715 TonB-dependent Receptor Plug Domain WT60_01405 PF00593 TonB dependent receptor WT60_01410 PF00425 chorismate binding enzyme WT60_01415 PF13193 AMP-binding enzyme C-terminal domain WT60_01415 PF00501 AMP-binding enzyme WT60_01420 PF00550 Phosphopantetheine attachment site WT60_01420 PF00857 Isochorismatase family WT60_01430 PF00975 Thioesterase domain WT60_01430 PF00550 Phosphopantetheine attachment site WT60_01430 PF00501 AMP-binding enzyme WT60_01430 PF00668 Condensation domain WT60_01430 PF13193 AMP-binding enzyme C-terminal domain WT60_01435 PF00106 short chain dehydrogenase WT60_01440 PF00793 DAHP synthetase I family WT60_01470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WT60_01470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_01475 PF01810 LysE type translocator WT60_01490 PF03922 OmpW family WT60_01505 PF01118 Semialdehyde dehydrogenase, NAD binding domain WT60_01510 PF03358 NADPH-dependent FMN reductase WT60_01515 PF01161 Phosphatidylethanolamine-binding protein WT60_01520 PF00156 Phosphoribosyl transferase domain WT60_01525 PF01515 Phosphate acetyl/butaryl transferase WT60_01525 PF00390 Malic enzyme, N-terminal domain WT60_01525 PF03949 Malic enzyme, NAD binding domain WT60_01530 PF01610 Transposase WT60_01530 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_01530 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_01545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WT60_01550 PF01037 Lrp/AsnC ligand binding domain WT60_01550 PF13404 AsnC-type helix-turn-helix domain WT60_01560 PF17932 Tetracyclin repressor-like, C-terminal domain WT60_01560 PF00440 Bacterial regulatory proteins, tetR family WT60_01570 PF00970 Oxidoreductase FAD-binding domain WT60_01570 PF00175 Oxidoreductase NAD-binding domain WT60_01570 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_01575 PF01883 Iron-sulfur cluster assembly protein WT60_01580 PF05138 Phenylacetic acid catabolic protein WT60_01585 PF06243 Phenylacetic acid degradation B WT60_01590 PF05138 Phenylacetic acid catabolic protein WT60_01630 PF13683 Integrase core domain WT60_01630 PF13276 HTH-like domain WT60_01635 PF01527 Transposase WT60_01655 PF00009 Elongation factor Tu GTP binding domain WT60_01655 PF03144 Elongation factor Tu domain 2 WT60_01655 PF03143 Elongation factor Tu C-terminal domain WT60_01665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WT60_01670 PF00467 KOW motif WT60_01670 PF02357 Transcription termination factor nusG WT60_01675 PF03946 Ribosomal protein L11, N-terminal domain WT60_01675 PF00298 Ribosomal protein L11, RNA binding domain WT60_01680 PF00687 Ribosomal protein L1p/L10e family WT60_01685 PF00466 Ribosomal protein L10 WT60_01690 PF16320 Ribosomal protein L7/L12 dimerisation domain WT60_01690 PF00542 Ribosomal protein L7/L12 C-terminal domain WT60_01695 PF04560 RNA polymerase Rpb2, domain 7 WT60_01695 PF00562 RNA polymerase Rpb2, domain 6 WT60_01695 PF10385 RNA polymerase beta subunit external 1 domain WT60_01695 PF04565 RNA polymerase Rpb2, domain 3 WT60_01695 PF04563 RNA polymerase beta subunit WT60_01695 PF04561 RNA polymerase Rpb2, domain 2 WT60_01700 PF00623 RNA polymerase Rpb1, domain 2 WT60_01700 PF04998 RNA polymerase Rpb1, domain 5 WT60_01700 PF05000 RNA polymerase Rpb1, domain 4 WT60_01700 PF04983 RNA polymerase Rpb1, domain 3 WT60_01700 PF04997 RNA polymerase Rpb1, domain 1 WT60_01705 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_01705 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_01705 PF01610 Transposase WT60_01710 PF00570 HRDC domain WT60_01710 PF09382 RQC domain WT60_01710 PF00271 Helicase conserved C-terminal domain WT60_01710 PF00270 DEAD/DEAH box helicase WT60_01710 PF16124 RecQ zinc-binding WT60_01715 PF00164 Ribosomal protein S12/S23 WT60_01720 PF00177 Ribosomal protein S7p/S5e WT60_01725 PF03764 Elongation factor G, domain IV WT60_01725 PF03144 Elongation factor Tu domain 2 WT60_01725 PF00009 Elongation factor Tu GTP binding domain WT60_01725 PF14492 Elongation Factor G, domain II WT60_01725 PF00679 Elongation factor G C-terminus WT60_01730 PF03143 Elongation factor Tu C-terminal domain WT60_01730 PF00009 Elongation factor Tu GTP binding domain WT60_01730 PF03144 Elongation factor Tu domain 2 WT60_01735 PF00338 Ribosomal protein S10p/S20e WT60_01740 PF00297 Ribosomal protein L3 WT60_01745 PF00573 Ribosomal protein L4/L1 family WT60_01750 PF00276 Ribosomal protein L23 WT60_01755 PF03947 Ribosomal Proteins L2, C-terminal domain WT60_01755 PF00181 Ribosomal Proteins L2, RNA binding domain WT60_01760 PF00203 Ribosomal protein S19 WT60_01765 PF00237 Ribosomal protein L22p/L17e WT60_01770 PF00189 Ribosomal protein S3, C-terminal domain WT60_01770 PF07650 KH domain WT60_01775 PF00252 Ribosomal protein L16p/L10e WT60_01780 PF00831 Ribosomal L29 protein WT60_01785 PF00366 Ribosomal protein S17 WT60_01790 PF00238 Ribosomal protein L14p/L23e WT60_01795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WT60_01800 PF00673 ribosomal L5P family C-terminus WT60_01800 PF00281 Ribosomal protein L5 WT60_01805 PF00253 Ribosomal protein S14p/S29e WT60_01810 PF00410 Ribosomal protein S8 WT60_01815 PF00347 Ribosomal protein L6 WT60_01820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WT60_01825 PF00333 Ribosomal protein S5, N-terminal domain WT60_01825 PF03719 Ribosomal protein S5, C-terminal domain WT60_01830 PF00327 Ribosomal protein L30p/L7e WT60_01835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WT60_01840 PF00344 SecY translocase WT60_01845 PF01176 Translation initiation factor 1A / IF-1 WT60_01850 PF00444 Ribosomal protein L36 WT60_01855 PF00416 Ribosomal protein S13/S18 WT60_01860 PF00411 Ribosomal protein S11 WT60_01865 PF00163 Ribosomal protein S4/S9 N-terminal domain WT60_01865 PF01479 S4 domain WT60_01870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WT60_01870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WT60_01870 PF01000 RNA polymerase Rpb3/RpoA insert domain WT60_01875 PF01196 Ribosomal protein L17 WT60_01885 PF02683 Cytochrome C biogenesis protein transmembrane region WT60_01885 PF11412 Disulphide bond corrector protein DsbC WT60_01890 PF00490 Delta-aminolevulinic acid dehydratase WT60_01895 PF01926 50S ribosome-binding GTPase WT60_01900 PF00034 Cytochrome c WT60_01905 PF05140 ResB-like family WT60_01910 PF01578 Cytochrome C assembly protein WT60_01915 PF00174 Oxidoreductase molybdopterin binding domain WT60_01920 PF01794 Ferric reductase like transmembrane component WT60_01925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WT60_01925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WT60_01935 PF01491 Frataxin-like domain WT60_01940 PF00912 Transglycosylase WT60_01940 PF00905 Penicillin binding protein transpeptidase domain WT60_01940 PF17092 Penicillin-binding protein OB-like domain WT60_01960 PF11741 AMIN domain WT60_01960 PF00263 Bacterial type II and III secretion system protein WT60_01960 PF03958 Bacterial type II/III secretion system short domain WT60_01960 PF07660 Secretin and TonB N terminus short domain WT60_01965 PF01202 Shikimate kinase WT60_01970 PF01761 3-dehydroquinate synthase WT60_01975 PF13286 Phosphohydrolase-associated domain WT60_01975 PF01966 HD domain WT60_01980 PF13416 Bacterial extracellular solute-binding protein WT60_01985 PF00528 Binding-protein-dependent transport system inner membrane component WT60_01990 PF00528 Binding-protein-dependent transport system inner membrane component WT60_01995 PF00005 ABC transporter WT60_01995 PF17912 MalK OB fold domain WT60_02000 PF03009 Glycerophosphoryl diester phosphodiesterase family WT60_02015 PF04898 Glutamate synthase central domain WT60_02015 PF01645 Conserved region in glutamate synthase WT60_02015 PF01493 GXGXG motif WT60_02015 PF00310 Glutamine amidotransferases class-II WT60_02020 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_02020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WT60_02025 PF01235 Sodium:alanine symporter family WT60_02045 PF00005 ABC transporter WT60_02045 PF06472 ABC transporter transmembrane region 2 WT60_02050 PF01266 FAD dependent oxidoreductase WT60_02060 PF05690 Thiazole biosynthesis protein ThiG WT60_02065 PF02581 Thiamine monophosphate synthase WT60_02070 PF00005 ABC transporter WT60_02075 PF02405 Permease MlaE WT60_02080 PF02470 MlaD protein WT60_02100 PF00005 ABC transporter WT60_02105 PF01061 ABC-2 type transporter WT60_02115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WT60_02120 PF01634 ATP phosphoribosyltransferase WT60_02125 PF00815 Histidinol dehydrogenase WT60_02130 PF00155 Aminotransferase class I and II WT60_02135 PF00475 Imidazoleglycerol-phosphate dehydratase WT60_02140 PF01914 MarC family integral membrane protein WT60_02145 PF00117 Glutamine amidotransferase class-I WT60_02150 PF00977 Histidine biosynthesis protein WT60_02155 PF00977 Histidine biosynthesis protein WT60_02160 PF01502 Phosphoribosyl-AMP cyclohydrolase WT60_02165 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WT60_02180 PF02416 mttA/Hcf106 family WT60_02185 PF02416 mttA/Hcf106 family WT60_02190 PF00902 Sec-independent protein translocase protein (TatC) WT60_02195 PF17820 PDZ domain WT60_02195 PF13180 PDZ domain WT60_02200 PF01784 NIF3 (NGG1p interacting factor 3) WT60_02205 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WT60_02205 PF00355 Rieske [2Fe-2S] domain WT60_02210 PF00033 Cytochrome b/b6/petB WT60_02210 PF00032 Cytochrome b(C-terminal)/b6/petD WT60_02215 PF02167 Cytochrome C1 family WT60_02220 PF02798 Glutathione S-transferase, N-terminal domain WT60_02220 PF00043 Glutathione S-transferase, C-terminal domain WT60_02225 PF04386 Stringent starvation protein B WT60_02235 PF13356 Arm DNA-binding domain WT60_02235 PF00589 Phage integrase family WT60_02265 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_02265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_02265 PF01610 Transposase WT60_02305 PF09588 YqaJ-like viral recombinase domain WT60_02340 PF01381 Helix-turn-helix WT60_02360 PF02384 N-6 DNA Methylase WT60_02370 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) WT60_02370 PF11867 Domain of unknown function (DUF3387) WT60_02370 PF18766 SWI2/SNF2 ATPase WT60_02380 PF13175 AAA ATPase domain WT60_02435 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_02435 PF01610 Transposase WT60_02435 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_02495 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_02495 PF17871 AAA lid domain WT60_02495 PF00004 ATPase family associated with various cellular activities (AAA) WT60_02495 PF07724 AAA domain (Cdc48 subfamily) WT60_02505 PF00691 OmpA family WT60_02535 PF00664 ABC transporter transmembrane region WT60_02535 PF03412 Peptidase C39 family WT60_02535 PF00005 ABC transporter WT60_02540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_02540 PF00529 HlyD membrane-fusion protein of T1SS WT60_02555 PF01433 Peptidase family M1 domain WT60_02555 PF11838 ERAP1-like C-terminal domain WT60_02600 PF00012 Hsp70 protein WT60_02605 PF00313 'Cold-shock' DNA-binding domain WT60_02610 PF13520 Amino acid permease WT60_02615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WT60_02620 PF02441 Flavoprotein WT60_02625 PF00462 Glutaredoxin WT60_02630 PF17827 PrmC N-terminal domain WT60_02630 PF05175 Methyltransferase small domain WT60_02635 PF03462 PCRF domain WT60_02635 PF00472 RF-1 domain WT60_02640 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WT60_02640 PF01488 Shikimate / quinate 5-dehydrogenase WT60_02640 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WT60_02655 PF00557 Metallopeptidase family M24 WT60_02655 PF01321 Creatinase/Prolidase N-terminal domain WT60_02660 PF00857 Isochorismatase family WT60_02675 PF00005 ABC transporter WT60_02675 PF12848 ABC transporter WT60_02690 PF03009 Glycerophosphoryl diester phosphodiesterase family WT60_02705 PF00324 Amino acid permease WT60_02710 PF01926 50S ribosome-binding GTPase WT60_02710 PF06071 Protein of unknown function (DUF933) WT60_02720 PF01494 FAD binding domain WT60_02725 PF13098 Thioredoxin-like domain WT60_02725 PF10411 Disulfide bond isomerase protein N-terminus WT60_02735 PF02525 Flavodoxin-like fold WT60_02740 PF03167 Uracil DNA glycosylase superfamily WT60_02750 PF00218 Indole-3-glycerol phosphate synthase WT60_02755 PF00591 Glycosyl transferase family, a/b domain WT60_02755 PF02885 Glycosyl transferase family, helical bundle domain WT60_02760 PF00117 Glutamine amidotransferase class-I WT60_02765 PF04715 Anthranilate synthase component I, N terminal region WT60_02765 PF00425 chorismate binding enzyme WT60_02770 PF13419 Haloacid dehalogenase-like hydrolase WT60_02780 PF04379 ApaG domain WT60_02785 PF06725 3D domain WT60_02785 PF03562 MltA specific insert domain WT60_02795 PF03061 Thioesterase superfamily WT60_02800 PF00378 Enoyl-CoA hydratase/isomerase WT60_02805 PF00108 Thiolase, N-terminal domain WT60_02805 PF02803 Thiolase, C-terminal domain WT60_02815 PF00378 Enoyl-CoA hydratase/isomerase WT60_02850 PF05717 IS66 Orf2 like protein WT60_02855 PF13817 IS66 C-terminal element WT60_02855 PF13007 Transposase C of IS166 homeodomain WT60_02855 PF03050 Transposase IS66 family WT60_02855 PF13005 zinc-finger binding domain of transposase IS66 WT60_02860 PF00665 Integrase core domain WT60_02870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_02870 PF00384 Molybdopterin oxidoreductase WT60_02870 PF01568 Molydopterin dinucleotide binding domain WT60_02875 PF00501 AMP-binding enzyme WT60_02875 PF13193 AMP-binding enzyme C-terminal domain WT60_02880 PF13609 Gram-negative porin WT60_02885 PF03232 Ubiquinone biosynthesis protein COQ7 WT60_02890 PF02381 MraZ protein, putative antitoxin-like WT60_02895 PF01795 MraW methylase family WT60_02900 PF04999 Cell division protein FtsL WT60_02905 PF00905 Penicillin binding protein transpeptidase domain WT60_02905 PF03717 Penicillin-binding Protein dimerisation domain WT60_02910 PF08245 Mur ligase middle domain WT60_02910 PF02875 Mur ligase family, glutamate ligase domain WT60_02915 PF01225 Mur ligase family, catalytic domain WT60_02915 PF08245 Mur ligase middle domain WT60_02915 PF02875 Mur ligase family, glutamate ligase domain WT60_02920 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WT60_02920 PF00953 Glycosyl transferase family 4 WT60_02925 PF02875 Mur ligase family, glutamate ligase domain WT60_02925 PF08245 Mur ligase middle domain WT60_02930 PF01098 Cell cycle protein WT60_02935 PF04101 Glycosyltransferase family 28 C-terminal domain WT60_02935 PF03033 Glycosyltransferase family 28 N-terminal domain WT60_02940 PF02875 Mur ligase family, glutamate ligase domain WT60_02940 PF01225 Mur ligase family, catalytic domain WT60_02940 PF08245 Mur ligase middle domain WT60_02945 PF07478 D-ala D-ala ligase C-terminus WT60_02945 PF01820 D-ala D-ala ligase N-terminus WT60_02950 PF03799 Cell division protein FtsQ WT60_02950 PF08478 POTRA domain, FtsQ-type WT60_02955 PF02491 SHS2 domain inserted in FTSA WT60_02960 PF00091 Tubulin/FtsZ family, GTPase domain WT60_02960 PF12327 FtsZ family, C-terminal domain WT60_02965 PF08534 Redoxin WT60_02970 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WT60_02980 PF07516 SecA Wing and Scaffold domain WT60_02980 PF01043 SecA preprotein cross-linking domain WT60_02980 PF07517 SecA DEAD-like domain WT60_02980 PF02810 SEC-C motif WT60_02985 PF01960 ArgJ family WT60_02995 PF00293 NUDIX domain WT60_03000 PF03884 DNA gyrase inhibitor YacG WT60_03005 PF07072 Cell division protein WT60_03010 PF01121 Dephospho-CoA kinase WT60_03015 PF01478 Type IV leader peptidase family WT60_03015 PF06750 Bacterial Peptidase A24 N-terminal domain WT60_03020 PF00482 Type II secretion system (T2SS), protein F WT60_03025 PF00437 Type II/IV secretion system protein WT60_03025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WT60_03030 PF00571 CBS domain WT60_03030 PF03471 Transporter associated domain WT60_03030 PF01595 Cyclin M transmembrane N-terminal domain WT60_03040 PF13005 zinc-finger binding domain of transposase IS66 WT60_03040 PF03050 Transposase IS66 family WT60_03040 PF13817 IS66 C-terminal element WT60_03040 PF13007 Transposase C of IS166 homeodomain WT60_03045 PF05717 IS66 Orf2 like protein WT60_03090 PF00145 C-5 cytosine-specific DNA methylase WT60_03110 PF05717 IS66 Orf2 like protein WT60_03115 PF03050 Transposase IS66 family WT60_03115 PF13817 IS66 C-terminal element WT60_03115 PF13007 Transposase C of IS166 homeodomain WT60_03115 PF13005 zinc-finger binding domain of transposase IS66 WT60_03130 PF00348 Polyprenyl synthetase WT60_03135 PF00829 Ribosomal prokaryotic L21 protein WT60_03140 PF01016 Ribosomal L27 protein WT60_03145 PF01018 GTP1/OBG WT60_03145 PF01926 50S ribosome-binding GTPase WT60_03150 PF01472 PUA domain WT60_03150 PF00696 Amino acid kinase family WT60_03160 PF00293 NUDIX domain WT60_03165 PF04073 Aminoacyl-tRNA editing domain WT60_03165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WT60_03165 PF03129 Anticodon binding domain WT60_03170 PF01914 MarC family integral membrane protein WT60_03180 PF00448 SRP54-type protein, GTPase domain WT60_03180 PF02978 Signal peptide binding domain WT60_03180 PF02881 SRP54-type protein, helical bundle domain WT60_03185 PF01578 Cytochrome C assembly protein WT60_03195 PF01510 N-acetylmuramoyl-L-alanine amidase WT60_03200 PF00317 Ribonucleotide reductase, all-alpha domain WT60_03200 PF03477 ATP cone domain WT60_03200 PF02867 Ribonucleotide reductase, barrel domain WT60_03205 PF00268 Ribonucleotide reductase, small chain WT60_03220 PF00294 pfkB family carbohydrate kinase WT60_03225 PF08534 Redoxin WT60_03240 PF02785 Biotin carboxylase C-terminal domain WT60_03240 PF00289 Biotin carboxylase, N-terminal domain WT60_03240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WT60_03245 PF00364 Biotin-requiring enzyme WT60_03250 PF01220 Dehydroquinase class II WT60_03255 PF00578 AhpC/TSA family WT60_03265 PF02875 Mur ligase family, glutamate ligase domain WT60_03265 PF08245 Mur ligase middle domain WT60_03265 PF01225 Mur ligase family, catalytic domain WT60_03270 PF05728 Uncharacterised protein family (UPF0227) WT60_03275 PF00773 RNB domain WT60_03280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WT60_03280 PF01488 Shikimate / quinate 5-dehydrogenase WT60_03280 PF08501 Shikimate dehydrogenase substrate binding domain WT60_03285 PF00912 Transglycosylase WT60_03300 PF01614 Bacterial transcriptional regulator WT60_03300 PF09339 IclR helix-turn-helix domain WT60_03305 PF05035 2-keto-3-deoxy-galactonokinase WT60_03320 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WT60_03325 PF00005 ABC transporter WT60_03330 PF02653 Branched-chain amino acid transport system / permease component WT60_03345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WT60_03350 PF02464 Competence-damaged protein WT60_03355 PF04608 Phosphatidylglycerophosphatase A WT60_03360 PF00586 AIR synthase related protein, N-terminal domain WT60_03360 PF02769 AIR synthase related protein, C-terminal domain WT60_03365 PF00390 Malic enzyme, N-terminal domain WT60_03365 PF03949 Malic enzyme, NAD binding domain WT60_03365 PF01515 Phosphate acetyl/butaryl transferase WT60_03380 PF04452 RNA methyltransferase WT60_03390 PF17284 Spermidine synthase tetramerisation domain WT60_03395 PF02780 Transketolase, C-terminal domain WT60_03395 PF02779 Transketolase, pyrimidine binding domain WT60_03395 PF00456 Transketolase, thiamine diphosphate binding domain WT60_03400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WT60_03400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WT60_03410 PF07690 Major Facilitator Superfamily WT60_03415 PF02560 Cyanate lyase C-terminal domain WT60_03420 PF00484 Carbonic anhydrase WT60_03425 PF03466 LysR substrate binding domain WT60_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_03430 PF00392 Bacterial regulatory proteins, gntR family WT60_03430 PF07729 FCD domain WT60_03435 PF00375 Sodium:dicarboxylate symporter family WT60_03440 PF03561 Allantoicase repeat WT60_03445 PF04115 Ureidoglycolate lyase WT60_03450 PF01475 Ferric uptake regulator family WT60_03455 PF04355 SmpA / OmlA family WT60_03460 PF05173 Dihydrodipicolinate reductase, C-terminus WT60_03460 PF01113 Dihydrodipicolinate reductase, N-terminus WT60_03465 PF01618 MotA/TolQ/ExbB proton channel family WT60_03470 PF02472 Biopolymer transport protein ExbD/TolR WT60_03475 PF08264 Anticodon-binding domain of tRNA WT60_03475 PF00133 tRNA synthetases class I (I, L, M and V) WT60_03475 PF13603 Leucyl-tRNA synthetase, Domain 2 WT60_03475 PF09334 tRNA synthetases class I (M) WT60_03490 PF00171 Aldehyde dehydrogenase family WT60_03500 PF02685 Glucokinase WT60_03500 PF01418 Helix-turn-helix domain, rpiR family WT60_03500 PF01380 SIS domain WT60_03505 PF00920 Dehydratase family WT60_03510 PF01081 KDPG and KHG aldolase WT60_03515 PF02447 GntP family permease WT60_03520 PF01202 Shikimate kinase WT60_03525 PF08328 Adenylosuccinate lyase C-terminal WT60_03525 PF00206 Lyase WT60_03530 PF07690 Major Facilitator Superfamily WT60_03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_03535 PF03466 LysR substrate binding domain WT60_03540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WT60_03540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WT60_03545 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_03550 PF00528 Binding-protein-dependent transport system inner membrane component WT60_03555 PF00528 Binding-protein-dependent transport system inner membrane component WT60_03560 PF00005 ABC transporter WT60_03565 PF13230 Glutamine amidotransferases class-II WT60_03570 PF01979 Amidohydrolase family WT60_03585 PF00572 Ribosomal protein L13 WT60_03590 PF00380 Ribosomal protein S9/S16 WT60_03595 PF01521 Iron-sulphur cluster biosynthesis WT60_03600 PF12833 Helix-turn-helix domain WT60_03600 PF02311 AraC-like ligand binding domain WT60_03605 PF02798 Glutathione S-transferase, N-terminal domain WT60_03610 PF02798 Glutathione S-transferase, N-terminal domain WT60_03610 PF00043 Glutathione S-transferase, C-terminal domain WT60_03615 PF03702 Anhydro-N-acetylmuramic acid kinase WT60_03620 PF00579 tRNA synthetases class I (W and Y) WT60_03620 PF01479 S4 domain WT60_03625 PF02580 D-Tyr-tRNA(Tyr) deacylase WT60_03630 PF00300 Histidine phosphatase superfamily (branch 1) WT60_03645 PF17864 RuvB AAA lid domain WT60_03645 PF05491 RuvB C-terminal winged helix domain WT60_03645 PF05496 Holliday junction DNA helicase RuvB P-loop domain WT60_03650 PF07499 RuvA, C-terminal domain WT60_03650 PF01330 RuvA N terminal domain WT60_03655 PF02075 Crossover junction endodeoxyribonuclease RuvC WT60_03660 PF02142 MGS-like domain WT60_03660 PF01808 AICARFT/IMPCHase bienzyme WT60_03665 PF02954 Bacterial regulatory protein, Fis family WT60_03670 PF01207 Dihydrouridine synthase (Dus) WT60_03675 PF01494 FAD binding domain WT60_03680 PF00557 Metallopeptidase family M24 WT60_03680 PF05195 Aminopeptidase P, N-terminal domain WT60_03690 PF13417 Glutathione S-transferase, N-terminal domain WT60_03690 PF00043 Glutathione S-transferase, C-terminal domain WT60_03695 PF01645 Conserved region in glutamate synthase WT60_03705 PF00293 NUDIX domain WT60_03710 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WT60_03710 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WT60_03715 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WT60_03720 PF02233 NAD(P) transhydrogenase beta subunit WT60_03750 PF02926 THUMP domain WT60_03750 PF01170 Putative RNA methylase family UPF0020 WT60_03770 PF02470 MlaD protein WT60_03775 PF04403 Paraquat-inducible protein A WT60_03790 PF01292 Prokaryotic cytochrome b561 WT60_03795 PF04264 YceI-like domain WT60_03800 PF04264 YceI-like domain WT60_03805 PF07549 SecD/SecF GG Motif WT60_03805 PF02355 Protein export membrane protein WT60_03810 PF02355 Protein export membrane protein WT60_03810 PF13721 SecD export protein N-terminal TM region WT60_03810 PF07549 SecD/SecF GG Motif WT60_03815 PF02699 Preprotein translocase subunit WT60_03825 PF02547 Queuosine biosynthesis protein WT60_03830 PF00270 DEAD/DEAH box helicase WT60_03830 PF17191 RecG wedge domain WT60_03830 PF00271 Helicase conserved C-terminal domain WT60_03835 PF03466 LysR substrate binding domain WT60_03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_03845 PF00141 Peroxidase WT60_03855 PF00210 Ferritin-like domain WT60_03860 PF01638 HxlR-like helix-turn-helix WT60_03865 PF01040 UbiA prenyltransferase family WT60_03875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_03875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_03885 PF00196 Bacterial regulatory proteins, luxR family WT60_03885 PF03472 Autoinducer binding domain WT60_03890 PF00266 Aminotransferase class-V WT60_03895 PF05721 Phytanoyl-CoA dioxygenase (PhyH) WT60_03900 PF00155 Aminotransferase class I and II WT60_03915 PF03807 NADP oxidoreductase coenzyme F420-dependent WT60_03915 PF14748 Pyrroline-5-carboxylate reductase dimerisation WT60_03920 PF01168 Alanine racemase, N-terminal domain WT60_03925 PF13183 4Fe-4S dicluster domain WT60_03925 PF02754 Cysteine-rich domain WT60_03930 PF01565 FAD binding domain WT60_03935 PF01565 FAD binding domain WT60_03935 PF02913 FAD linked oxidases, C-terminal domain WT60_03940 PF01565 FAD binding domain WT60_03940 PF02913 FAD linked oxidases, C-terminal domain WT60_03945 PF01923 Cobalamin adenosyltransferase WT60_03950 PF00175 Oxidoreductase NAD-binding domain WT60_03950 PF00970 Oxidoreductase FAD-binding domain WT60_03950 PF00042 Globin WT60_03960 PF00793 DAHP synthetase I family WT60_03965 PF01523 Putative modulator of DNA gyrase WT60_03970 PF00795 Carbon-nitrogen hydrolase WT60_03975 PF13116 Protein of unknown function WT60_03975 PF13502 AsmA-like C-terminal region WT60_03980 PF03710 Glutamate-ammonia ligase adenylyltransferase WT60_03980 PF08335 GlnD PII-uridylyltransferase WT60_03985 PF02463 RecF/RecN/SMC N terminal domain WT60_03990 PF01513 ATP-NAD kinase WT60_03995 PF01628 HrcA protein C terminal domain WT60_03995 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding WT60_04000 PF00762 Ferrochelatase WT60_04005 PF01479 S4 domain WT60_04010 PF01025 GrpE WT60_04020 PF00012 Hsp70 protein WT60_04025 PF00226 DnaJ domain WT60_04025 PF01556 DnaJ C terminal domain WT60_04025 PF00684 DnaJ central domain WT60_04030 PF00425 chorismate binding enzyme WT60_04030 PF04715 Anthranilate synthase component I, N terminal region WT60_04035 PF02548 Ketopantoate hydroxymethyltransferase WT60_04040 PF01712 Deoxynucleoside kinase WT60_04045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WT60_04050 PF01743 Poly A polymerase head domain WT60_04050 PF12626 Polymerase A arginine-rich C-terminus WT60_04050 PF12627 Probable RNA and SrmB- binding site of polymerase A WT60_04060 PF00308 Bacterial dnaA protein WT60_04065 PF00586 AIR synthase related protein, N-terminal domain WT60_04065 PF02769 AIR synthase related protein, C-terminal domain WT60_04080 PF01119 DNA mismatch repair protein, C-terminal domain WT60_04080 PF08676 MutL C terminal dimerisation domain WT60_04085 PF09335 SNARE associated Golgi protein WT60_04090 PF00924 Mechanosensitive ion channel WT60_04090 PF05552 Conserved TM helix WT60_04095 PF07929 Plasmid pRiA4b ORF-3-like protein WT60_04105 PF05717 IS66 Orf2 like protein WT60_04115 PF01050 Mannose-6-phosphate isomerase WT60_04115 PF00483 Nucleotidyl transferase WT60_04120 PF05159 Capsule polysaccharide biosynthesis protein WT60_04130 PF02563 Polysaccharide biosynthesis/export protein WT60_04140 PF01061 ABC-2 type transporter WT60_04175 PF16363 GDP-mannose 4,6 dehydratase WT60_04180 PF00288 GHMP kinases N terminal domain WT60_04180 PF08544 GHMP kinases C terminal WT60_04185 PF13580 SIS domain WT60_04190 PF00483 Nucleotidyl transferase WT60_04200 PF05159 Capsule polysaccharide biosynthesis protein WT60_04225 PF00106 short chain dehydrogenase WT60_04235 PF14765 Polyketide synthase dehydratase WT60_04235 PF00550 Phosphopantetheine attachment site WT60_04235 PF08659 KR domain WT60_04235 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_04235 PF16197 Ketoacyl-synthetase C-terminal extension WT60_04235 PF08240 Alcohol dehydrogenase GroES-like domain WT60_04235 PF00698 Acyl transferase domain WT60_04235 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_04240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WT60_04245 PF00155 Aminotransferase class I and II WT60_04270 PF12833 Helix-turn-helix domain WT60_04270 PF02311 AraC-like ligand binding domain WT60_04275 PF02397 Bacterial sugar transferase WT60_04280 PF02563 Polysaccharide biosynthesis/export protein WT60_04280 PF10531 SLBB domain WT60_04285 PF01451 Low molecular weight phosphotyrosine protein phosphatase WT60_04290 PF02706 Chain length determinant protein WT60_04290 PF13614 AAA domain WT60_04290 PF13807 G-rich domain on putative tyrosine kinase WT60_04300 PF05159 Capsule polysaccharide biosynthesis protein WT60_04305 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_04315 PF00534 Glycosyl transferases group 1 WT60_04315 PF13439 Glycosyltransferase Family 4 WT60_04320 PF00793 DAHP synthetase I family WT60_04330 PF01380 SIS domain WT60_04330 PF00571 CBS domain WT60_04335 PF00483 Nucleotidyl transferase WT60_04340 PF05247 Flagellar transcriptional activator (FlhD) WT60_04355 PF00266 Aminotransferase class-V WT60_04360 PF00892 EamA-like transporter family WT60_04375 PF00691 OmpA family WT60_04380 PF04052 TolB amino-terminal domain WT60_04380 PF07676 WD40-like Beta Propeller Repeat WT60_04390 PF02472 Biopolymer transport protein ExbD/TolR WT60_04395 PF01618 MotA/TolQ/ExbB proton channel family WT60_04405 PF00106 short chain dehydrogenase WT60_04410 PF00464 Serine hydroxymethyltransferase WT60_04415 PF03477 ATP cone domain WT60_04440 PF00114 Pilin (bacterial filament) WT60_04440 PF07963 Prokaryotic N-terminal methylation motif WT60_04460 PF10417 C-terminal domain of 1-Cys peroxiredoxin WT60_04460 PF00578 AhpC/TSA family WT60_04465 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_04465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_04465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_04490 PF01494 FAD binding domain WT60_04500 PF07690 Major Facilitator Superfamily WT60_04505 PF04209 homogentisate 1,2-dioxygenase WT60_04520 PF07690 Major Facilitator Superfamily WT60_04525 PF00881 Nitroreductase family WT60_04530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_04530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_04535 PF03466 LysR substrate binding domain WT60_04555 PF07690 Major Facilitator Superfamily WT60_04560 PF00881 Nitroreductase family WT60_04565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_04565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_04570 PF03466 LysR substrate binding domain WT60_04575 PF00266 Aminotransferase class-V WT60_04585 PF00892 EamA-like transporter family WT60_04590 PF07690 Major Facilitator Superfamily WT60_04595 PF01799 [2Fe-2S] binding domain WT60_04595 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_04600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WT60_04600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WT60_04615 PF00593 TonB dependent receptor WT60_04615 PF07715 TonB-dependent Receptor Plug Domain WT60_04620 PF00005 ABC transporter WT60_04630 PF01032 FecCD transport family WT60_04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_04635 PF03466 LysR substrate binding domain WT60_04660 PF10605 3HB-oligomer hydrolase (3HBOH) WT60_04670 PF01925 Sulfite exporter TauE/SafE WT60_04675 PF07690 Major Facilitator Superfamily WT60_04680 PF03009 Glycerophosphoryl diester phosphodiesterase family WT60_04685 PF01810 LysE type translocator WT60_04745 PF00166 Chaperonin 10 Kd subunit WT60_04750 PF00118 TCP-1/cpn60 chaperonin family WT60_04760 PF00301 Rubredoxin WT60_04770 PF02622 Uncharacterized ACR, COG1678 WT60_04775 PF03652 Holliday junction resolvase WT60_04780 PF00156 Phosphoribosyl transferase domain WT60_04785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WT60_04785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WT60_04790 PF01979 Amidohydrolase family WT60_04800 PF00149 Calcineurin-like phosphoesterase WT60_04805 PF16363 GDP-mannose 4,6 dehydratase WT60_04810 PF00483 Nucleotidyl transferase WT60_04815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WT60_04820 PF04321 RmlD substrate binding domain WT60_04835 PF00005 ABC transporter WT60_04845 PF00294 pfkB family carbohydrate kinase WT60_04855 PF14307 Glycosyltransferase WbsX WT60_04855 PF05045 Rhamnan synthesis protein F WT60_04870 PF01370 NAD dependent epimerase/dehydratase family WT60_04875 PF00953 Glycosyl transferase family 4 WT60_04880 PF02719 Polysaccharide biosynthesis protein WT60_04890 PF16363 GDP-mannose 4,6 dehydratase WT60_04895 PF13439 Glycosyltransferase Family 4 WT60_04895 PF00534 Glycosyl transferases group 1 WT60_04910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WT60_04910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WT60_04910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WT60_04910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WT60_04915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WT60_04925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WT60_04925 PF00534 Glycosyl transferases group 1 WT60_04930 PF02492 CobW/HypB/UreG, nucleotide-binding domain WT60_04935 PF01730 UreF WT60_04940 PF05194 UreE urease accessory protein, C-terminal domain WT60_04940 PF02814 UreE urease accessory protein, N-terminal domain WT60_04945 PF01979 Amidohydrolase family WT60_04945 PF00449 Urease alpha-subunit, N-terminal domain WT60_04950 PF00699 Urease beta subunit WT60_04955 PF00547 Urease, gamma subunit WT60_04960 PF01774 UreD urease accessory protein WT60_04965 PF00005 ABC transporter WT60_04970 PF00005 ABC transporter WT60_04975 PF02653 Branched-chain amino acid transport system / permease component WT60_04980 PF02653 Branched-chain amino acid transport system / permease component WT60_04990 PF00202 Aminotransferase class-III WT60_04995 PF00581 Rhodanese-like domain WT60_05010 PF04055 Radical SAM superfamily WT60_05010 PF06969 HemN C-terminal domain WT60_05015 PF03692 Putative zinc- or iron-chelating domain WT60_05025 PF02673 Bacitracin resistance protein BacA WT60_05030 PF02390 Putative methyltransferase WT60_05065 PF00082 Subtilase family WT60_05065 PF09286 Pro-kumamolisin, activation domain WT60_05070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WT60_05080 PF02325 YGGT family WT60_05100 PF00291 Pyridoxal-phosphate dependent enzyme WT60_05110 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WT60_05115 PF01464 Transglycosylase SLT domain WT60_05120 PF00155 Aminotransferase class I and II WT60_05125 PF01029 NusB family WT60_05130 PF00885 6,7-dimethyl-8-ribityllumazine synthase WT60_05135 PF00925 GTP cyclohydrolase II WT60_05135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WT60_05140 PF00677 Lumazine binding domain WT60_05145 PF01872 RibD C-terminal domain WT60_05145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WT60_05150 PF00202 Aminotransferase class-III WT60_05165 PF07690 Major Facilitator Superfamily WT60_05170 PF00291 Pyridoxal-phosphate dependent enzyme WT60_05175 PF00005 ABC transporter WT60_05185 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_05190 PF01418 Helix-turn-helix domain, rpiR family WT60_05190 PF02685 Glucokinase WT60_05190 PF01380 SIS domain WT60_05195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase WT60_05200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain WT60_05200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain WT60_05205 PF01547 Bacterial extracellular solute-binding protein WT60_05220 PF00005 ABC transporter WT60_05220 PF17912 MalK OB fold domain WT60_05225 PF03458 UPF0126 domain WT60_05230 PF01713 Smr domain WT60_05230 PF00488 MutS domain V WT60_05235 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_05240 PF17854 FtsK alpha domain WT60_05240 PF09397 Ftsk gamma domain WT60_05240 PF01580 FtsK/SpoIIIE family WT60_05240 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WT60_05250 PF16193 AAA C-terminal domain WT60_05250 PF12002 MgsA AAA+ ATPase C terminal WT60_05250 PF00004 ATPase family associated with various cellular activities (AAA) WT60_05260 PF02403 Seryl-tRNA synthetase N-terminal domain WT60_05260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WT60_05280 PF03775 Septum formation inhibitor MinC, C-terminal domain WT60_05280 PF05209 Septum formation inhibitor MinC, N-terminal domain WT60_05285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WT60_05290 PF03776 Septum formation topological specificity factor MinE WT60_05300 PF00654 Voltage gated chloride channel WT60_05305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WT60_05315 PF00083 Sugar (and other) transporter WT60_05315 PF07690 Major Facilitator Superfamily WT60_05350 PF03814 Potassium-transporting ATPase A subunit WT60_05360 PF02669 K+-transporting ATPase, c chain WT60_05365 PF00486 Transcriptional regulatory protein, C terminal WT60_05365 PF00072 Response regulator receiver domain WT60_05370 PF03170 Bacterial cellulose synthase subunit WT60_05375 PF01270 Glycosyl hydrolases family 8 WT60_05380 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) WT60_05400 PF07238 PilZ domain WT60_05400 PF03552 Cellulose synthase WT60_05400 PF00535 Glycosyl transferase family 2 WT60_05405 PF11658 Cellulose biosynthesis protein BcsG WT60_05420 PF04055 Radical SAM superfamily WT60_05420 PF06969 HemN C-terminal domain WT60_05425 PF01725 Ham1 family WT60_05430 PF01138 3' exoribonuclease family, domain 1 WT60_05430 PF03725 3' exoribonuclease family, domain 2 WT60_05435 PF08340 Domain of unknown function (DUF1732) WT60_05435 PF03755 YicC-like family, N-terminal region WT60_05440 PF00625 Guanylate kinase WT60_05445 PF01192 RNA polymerase Rpb6 WT60_05450 PF13291 ACT domain WT60_05450 PF04607 Region found in RelA / SpoT proteins WT60_05450 PF02824 TGS domain WT60_05465 PF03449 Transcription elongation factor, N-terminal WT60_05465 PF01272 Transcription elongation factor, GreA/GreB, C-term WT60_05470 PF13609 Gram-negative porin WT60_05480 PF00313 'Cold-shock' DNA-binding domain WT60_05485 PF14579 Helix-hairpin-helix motif WT60_05485 PF07733 Bacterial DNA polymerase III alpha NTPase domain WT60_05485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WT60_05485 PF11490 DNA polymerase III polC-type N-terminus II WT60_05485 PF14480 DNA polymerase III polC-type N-terminus I WT60_05485 PF02811 PHP domain WT60_05485 PF00929 Exonuclease WT60_05490 PF01817 Chorismate mutase type II WT60_05500 PF00593 TonB dependent receptor WT60_05500 PF07715 TonB-dependent Receptor Plug Domain WT60_05530 PF03466 LysR substrate binding domain WT60_05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_05540 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain WT60_05545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_05545 PF03466 LysR substrate binding domain WT60_05550 PF08267 Cobalamin-independent synthase, N-terminal domain WT60_05550 PF01717 Cobalamin-independent synthase, Catalytic domain WT60_05560 PF11940 Domain of unknown function (DUF3458) Ig-like fold WT60_05560 PF17432 Domain of unknown function (DUF3458_C) ARM repeats WT60_05560 PF01433 Peptidase family M1 domain WT60_05570 PF01169 Uncharacterized protein family UPF0016 WT60_05575 PF01979 Amidohydrolase family WT60_05580 PF00860 Permease family WT60_05585 PF00962 Adenosine/AMP deaminase WT60_05595 PF02600 Disulfide bond formation protein DsbB WT60_05600 PF01425 Amidase WT60_05615 PF07722 Peptidase C26 WT60_05620 PF07690 Major Facilitator Superfamily WT60_05630 PF01494 FAD binding domain WT60_05640 PF00384 Molybdopterin oxidoreductase WT60_05640 PF01568 Molydopterin dinucleotide binding domain WT60_05640 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WT60_05640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_05640 PF00037 4Fe-4S binding domain WT60_05645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WT60_05645 PF00037 4Fe-4S binding domain WT60_05645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WT60_05655 PF12728 Helix-turn-helix domain WT60_05655 PF12727 PBP superfamily domain WT60_05665 PF00398 Ribosomal RNA adenine dimethylase WT60_05675 PF13419 Haloacid dehalogenase-like hydrolase WT60_05685 PF00691 OmpA family WT60_05690 PF00521 DNA gyrase/topoisomerase IV, subunit A WT60_05690 PF03989 DNA gyrase C-terminal domain, beta-propeller WT60_05700 PF00266 Aminotransferase class-V WT60_05705 PF01817 Chorismate mutase type II WT60_05705 PF00800 Prephenate dehydratase WT60_05705 PF01842 ACT domain WT60_05710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WT60_05715 PF02224 Cytidylate kinase WT60_05720 PF00575 S1 RNA binding domain WT60_05725 PF00216 Bacterial DNA-binding protein WT60_05735 PF18073 Rubredoxin metal binding domain WT60_05740 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WT60_05740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WT60_05740 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WT60_05745 PF00294 pfkB family carbohydrate kinase WT60_05750 PF01370 NAD dependent epimerase/dehydratase family WT60_05760 PF00291 Pyridoxal-phosphate dependent enzyme WT60_05765 PF13406 Transglycosylase SLT domain WT60_05770 PF00850 Histone deacetylase domain WT60_05775 PF12146 Serine aminopeptidase, S33 WT60_05780 PF09383 NIL domain WT60_05780 PF00005 ABC transporter WT60_05785 PF00528 Binding-protein-dependent transport system inner membrane component WT60_05790 PF03180 NLPA lipoprotein WT60_05795 PF01012 Electron transfer flavoprotein domain WT60_05800 PF01012 Electron transfer flavoprotein domain WT60_05800 PF00766 Electron transfer flavoprotein FAD-binding domain WT60_05805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_05805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_05805 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_05805 PF12806 Acetyl-CoA dehydrogenase C-terminal like WT60_05810 PF01266 FAD dependent oxidoreductase WT60_05815 PF01037 Lrp/AsnC ligand binding domain WT60_05830 PF07995 Glucose / Sorbosone dehydrogenase WT60_05835 PF00886 Ribosomal protein S16 WT60_05840 PF05239 PRC-barrel domain WT60_05840 PF01782 RimM N-terminal domain WT60_05845 PF01746 tRNA (Guanine-1)-methyltransferase WT60_05850 PF01245 Ribosomal protein L19 WT60_05860 PF00293 NUDIX domain WT60_05865 PF17113 Regulatory signalling modulator protein AmpE WT60_05865 PF03186 CobD/Cbib protein WT60_05875 PF03193 RsgA GTPase WT60_05880 PF01435 Peptidase family M48 WT60_05885 PF00929 Exonuclease WT60_05890 PF00994 Probable molybdopterin binding domain WT60_05895 PF04751 Protein of unknown function (DUF615) WT60_05900 PF01523 Putative modulator of DNA gyrase WT60_05905 PF00186 Dihydrofolate reductase WT60_05915 PF00072 Response regulator receiver domain WT60_05915 PF00158 Sigma-54 interaction domain WT60_05915 PF02954 Bacterial regulatory protein, Fis family WT60_05940 PF00072 Response regulator receiver domain WT60_05940 PF00158 Sigma-54 interaction domain WT60_05940 PF02954 Bacterial regulatory protein, Fis family WT60_05945 PF00303 Thymidylate synthase WT60_05960 PF03061 Thioesterase superfamily WT60_05970 PF00206 Lyase WT60_05970 PF10415 Fumarase C C-terminus WT60_05980 PF01554 MatE WT60_06015 PF05981 CreA protein WT60_06030 PF11953 Domain of unknown function (DUF3470) WT60_06030 PF00037 4Fe-4S binding domain WT60_06035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WT60_06035 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WT60_06050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_06050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_06055 PF02646 RmuC family WT60_06060 PF00107 Zinc-binding dehydrogenase WT60_06060 PF08240 Alcohol dehydrogenase GroES-like domain WT60_06070 PF03454 MoeA C-terminal region (domain IV) WT60_06070 PF00994 Probable molybdopterin binding domain WT60_06070 PF03453 MoeA N-terminal region (domain I and II) WT60_06075 PF12804 MobA-like NTP transferase domain WT60_06080 PF06463 Molybdenum Cofactor Synthesis C WT60_06080 PF04055 Radical SAM superfamily WT60_06085 PF00575 S1 RNA binding domain WT60_06085 PF12111 Polyribonucleotide phosphorylase C terminal WT60_06085 PF10150 Ribonuclease E/G family WT60_06090 PF01479 S4 domain WT60_06090 PF00849 RNA pseudouridylate synthase WT60_06095 PF13419 Haloacid dehalogenase-like hydrolase WT60_06105 PF01343 Peptidase family S49 WT60_06110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_06115 PF02545 Maf-like protein WT60_06120 PF02620 Large ribosomal RNA subunit accumulation protein YceD WT60_06125 PF01783 Ribosomal L32p protein family WT60_06130 PF02504 Fatty acid synthesis protein WT60_06135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WT60_06135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WT60_06140 PF00698 Acyl transferase domain WT60_06150 PF00550 Phosphopantetheine attachment site WT60_06155 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_06155 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_06165 PF04542 Sigma-70 region 2 WT60_06165 PF08281 Sigma-70, region 4 WT60_06180 PF13180 PDZ domain WT60_06190 PF00679 Elongation factor G C-terminus WT60_06190 PF03144 Elongation factor Tu domain 2 WT60_06190 PF06421 GTP-binding protein LepA C-terminus WT60_06190 PF00009 Elongation factor Tu GTP binding domain WT60_06195 PF10502 Signal peptidase, peptidase S26 WT60_06200 PF14622 Ribonuclease-III-like WT60_06200 PF00035 Double-stranded RNA binding motif WT60_06205 PF07650 KH domain WT60_06205 PF01926 50S ribosome-binding GTPase WT60_06210 PF11967 Recombination protein O N terminal WT60_06210 PF02565 Recombination protein O C terminal WT60_06215 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WT60_06220 PF01648 4'-phosphopantetheinyl transferase superfamily WT60_06225 PF00933 Glycosyl hydrolase family 3 N terminal domain WT60_06230 PF02954 Bacterial regulatory protein, Fis family WT60_06230 PF00158 Sigma-54 interaction domain WT60_06230 PF00072 Response regulator receiver domain WT60_06235 PF01132 Elongation factor P (EF-P) OB domain WT60_06235 PF08207 Elongation factor P (EF-P) KOW-like domain WT60_06235 PF09285 Elongation factor P, C-terminal WT60_06245 PF08459 UvrC Helix-hairpin-helix N-terminal WT60_06245 PF02151 UvrB/uvrC motif WT60_06245 PF01541 GIY-YIG catalytic domain WT60_06250 PF01066 CDP-alcohol phosphatidyltransferase WT60_06350 PF13185 GAF domain WT60_06355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_06355 PF03466 LysR substrate binding domain WT60_06360 PF02678 Pirin WT60_06360 PF05726 Pirin C-terminal cupin domain WT60_06385 PF02630 SCO1/SenC WT60_06390 PF02358 Trehalose-phosphatase WT60_06395 PF00982 Glycosyltransferase family 20 WT60_06400 PF00664 ABC transporter transmembrane region WT60_06400 PF00005 ABC transporter WT60_06405 PF13439 Glycosyltransferase Family 4 WT60_06405 PF00534 Glycosyl transferases group 1 WT60_06420 PF01266 FAD dependent oxidoreductase WT60_06420 PF05690 Thiazole biosynthesis protein ThiG WT60_06425 PF13458 Periplasmic binding protein WT60_06430 PF05506 Domain of unknown function (DUF756) WT60_06430 PF04185 Phosphoesterase family WT60_06435 PF08543 Phosphomethylpyrimidine kinase WT60_06440 PF00561 alpha/beta hydrolase fold WT60_06445 PF00296 Luciferase-like monooxygenase WT60_06460 PF04794 YdjC-like protein WT60_06475 PF00528 Binding-protein-dependent transport system inner membrane component WT60_06480 PF00528 Binding-protein-dependent transport system inner membrane component WT60_06485 PF00005 ABC transporter WT60_06490 PF12833 Helix-turn-helix domain WT60_06495 PF00202 Aminotransferase class-III WT60_06500 PF04958 Arginine N-succinyltransferase beta subunit WT60_06505 PF04958 Arginine N-succinyltransferase beta subunit WT60_06510 PF00171 Aldehyde dehydrogenase family WT60_06515 PF04996 Succinylarginine dihydrolase WT60_06520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WT60_06525 PF00043 Glutathione S-transferase, C-terminal domain WT60_06525 PF02798 Glutathione S-transferase, N-terminal domain WT60_06530 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_06545 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WT60_06550 PF00510 Cytochrome c oxidase subunit III WT60_06555 PF00115 Cytochrome C and Quinol oxidase polypeptide I WT60_06560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WT60_06560 PF06481 COX Aromatic Rich Motif WT60_06570 PF02082 Transcriptional regulator WT60_06580 PF01883 Iron-sulfur cluster assembly protein WT60_06585 PF01592 NifU-like N terminal domain WT60_06590 PF00266 Aminotransferase class-V WT60_06600 PF00005 ABC transporter WT60_06605 PF01458 Uncharacterized protein family (UPF0051) WT60_06615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_06615 PF02203 Tar ligand binding domain homologue WT60_06615 PF00672 HAMP domain WT60_06620 PF04055 Radical SAM superfamily WT60_06620 PF06969 HemN C-terminal domain WT60_06625 PF00520 Ion transport protein WT60_06625 PF00027 Cyclic nucleotide-binding domain WT60_06685 PF01883 Iron-sulfur cluster assembly protein WT60_06690 PF00115 Cytochrome C and Quinol oxidase polypeptide I WT60_06695 PF00487 Fatty acid desaturase WT60_06700 PF03441 FAD binding domain of DNA photolyase WT60_06700 PF00875 DNA photolyase WT60_06715 PF03472 Autoinducer binding domain WT60_06715 PF00196 Bacterial regulatory proteins, luxR family WT60_06725 PF01648 4'-phosphopantetheinyl transferase superfamily WT60_06730 PF00221 Aromatic amino acid lyase WT60_06735 PF07702 UTRA domain WT60_06735 PF00392 Bacterial regulatory proteins, gntR family WT60_06740 PF17392 Urocanase C-terminal domain WT60_06740 PF17391 Urocanase N-terminal domain WT60_06740 PF01175 Urocanase Rossmann-like domain WT60_06750 PF01979 Amidohydrolase family WT60_06755 PF01979 Amidohydrolase family WT60_06780 PF07722 Peptidase C26 WT60_06785 PF00120 Glutamine synthetase, catalytic domain WT60_06790 PF00202 Aminotransferase class-III WT60_06805 PF04717 Type VI secretion system, phage-baseplate injector WT60_06840 PF03466 LysR substrate binding domain WT60_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_06845 PF18158 Adaptive response protein AidB N-terminal domain WT60_06845 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_06845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_06850 PF02515 CoA-transferase family III WT60_06855 PF07690 Major Facilitator Superfamily WT60_06855 PF00083 Sugar (and other) transporter WT60_06860 PF04362 Bacterial Fe(2+) trafficking WT60_06865 PF00583 Acetyltransferase (GNAT) family WT60_06865 PF00696 Amino acid kinase family WT60_06870 PF11898 Domain of unknown function (DUF3418) WT60_06870 PF00270 DEAD/DEAH box helicase WT60_06870 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WT60_06870 PF04408 Helicase associated domain (HA2) WT60_06870 PF00271 Helicase conserved C-terminal domain WT60_06890 PF00994 Probable molybdopterin binding domain WT60_06890 PF02464 Competence-damaged protein WT60_06890 PF18146 Damage-inducible protein CinA KH domain WT60_06905 PF00512 His Kinase A (phospho-acceptor) domain WT60_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_06905 PF00989 PAS fold WT60_06910 PF00158 Sigma-54 interaction domain WT60_06910 PF00072 Response regulator receiver domain WT60_06910 PF02954 Bacterial regulatory protein, Fis family WT60_06925 PF00196 Bacterial regulatory proteins, luxR family WT60_06925 PF00072 Response regulator receiver domain WT60_06930 PF07730 Histidine kinase WT60_06930 PF17200 Single Cache domain 2 WT60_06935 PF02665 Nitrate reductase gamma subunit WT60_06940 PF02613 Nitrate reductase delta subunit WT60_06945 PF14711 Respiratory nitrate reductase beta C-terminal WT60_06945 PF13247 4Fe-4S dicluster domain WT60_06950 PF00384 Molybdopterin oxidoreductase WT60_06950 PF01568 Molydopterin dinucleotide binding domain WT60_06950 PF14710 Respiratory nitrate reductase alpha N-terminal WT60_06955 PF07690 Major Facilitator Superfamily WT60_06960 PF07690 Major Facilitator Superfamily WT60_06970 PF00817 impB/mucB/samB family WT60_06970 PF11799 impB/mucB/samB family C-terminal domain WT60_06975 PF01432 Peptidase family M3 WT60_06980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WT60_06980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WT60_06985 PF00196 Bacterial regulatory proteins, luxR family WT60_06985 PF00072 Response regulator receiver domain WT60_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_06990 PF00512 His Kinase A (phospho-acceptor) domain WT60_06990 PF00989 PAS fold WT60_06995 PF17831 Pyruvate dehydrogenase E1 component middle domain WT60_06995 PF00456 Transketolase, thiamine diphosphate binding domain WT60_07000 PF00364 Biotin-requiring enzyme WT60_07000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WT60_07000 PF02817 e3 binding domain WT60_07005 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_07005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WT60_07010 PF09361 Phasin protein WT60_07015 PF00768 D-alanyl-D-alanine carboxypeptidase WT60_07020 PF09339 IclR helix-turn-helix domain WT60_07020 PF01614 Bacterial transcriptional regulator WT60_07025 PF02754 Cysteine-rich domain WT60_07030 PF02589 LUD domain WT60_07030 PF13183 4Fe-4S dicluster domain WT60_07030 PF11870 Domain of unknown function (DUF3390) WT60_07040 PF01451 Low molecular weight phosphotyrosine protein phosphatase WT60_07045 PF02082 Transcriptional regulator WT60_07050 PF00266 Aminotransferase class-V WT60_07055 PF01592 NifU-like N terminal domain WT60_07060 PF01521 Iron-sulphur cluster biosynthesis WT60_07065 PF07743 HSCB C-terminal oligomerisation domain WT60_07070 PF00012 Hsp70 protein WT60_07075 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_07080 PF04384 Iron-sulphur cluster assembly WT60_07090 PF01336 OB-fold nucleic acid binding domain WT60_07090 PF00152 tRNA synthetases class II (D, K and N) WT60_07095 PF03462 PCRF domain WT60_07095 PF00472 RF-1 domain WT60_07105 PF17768 RecJ OB domain WT60_07105 PF02272 DHHA1 domain WT60_07105 PF01368 DHH family WT60_07120 PF02687 FtsX-like permease family WT60_07120 PF12704 MacB-like periplasmic core domain WT60_07125 PF00005 ABC transporter WT60_07130 PF01026 TatD related DNase WT60_07135 PF03772 Competence protein WT60_07135 PF00753 Metallo-beta-lactamase superfamily WT60_07145 PF00117 Glutamine amidotransferase class-I WT60_07145 PF06418 CTP synthase N-terminus WT60_07150 PF00793 DAHP synthetase I family WT60_07155 PF00113 Enolase, C-terminal TIM barrel domain WT60_07155 PF03952 Enolase, N-terminal domain WT60_07160 PF04977 Septum formation initiator WT60_07170 PF01430 Hsp33 protein WT60_07175 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_07180 PF04305 Protein of unknown function (DUF455) WT60_07185 PF00561 alpha/beta hydrolase fold WT60_07190 PF02811 PHP domain WT60_07195 PF01300 Telomere recombination WT60_07200 PF02163 Peptidase family M50 WT60_07205 PF00579 tRNA synthetases class I (W and Y) WT60_07215 PF00701 Dihydrodipicolinate synthetase family WT60_07220 PF06804 NlpB/DapX lipoprotein WT60_07225 PF00753 Metallo-beta-lactamase superfamily WT60_07225 PF10996 Beta-Casp domain WT60_07225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WT60_07230 PF08007 Cupin superfamily protein WT60_07235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WT60_07245 PF05190 MutS family domain IV WT60_07245 PF00488 MutS domain V WT60_07245 PF01624 MutS domain I WT60_07245 PF05192 MutS domain III WT60_07245 PF05188 MutS domain II WT60_07255 PF00459 Inositol monophosphatase family WT60_07260 PF00588 SpoU rRNA Methylase family WT60_07265 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_07270 PF00149 Calcineurin-like phosphoesterase WT60_07275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WT60_07280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WT60_07290 PF01406 tRNA synthetases class I (C) catalytic domain WT60_07290 PF09190 DALR domain WT60_07300 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WT60_07305 PF01171 PP-loop family WT60_07305 PF09179 TilS substrate binding domain WT60_07305 PF11734 TilS substrate C-terminal domain WT60_07310 PF13840 ACT domain WT60_07310 PF00696 Amino acid kinase family WT60_07310 PF01842 ACT domain WT60_07335 PF00557 Metallopeptidase family M24 WT60_07355 PF11953 Domain of unknown function (DUF3470) WT60_07355 PF00037 4Fe-4S binding domain WT60_07360 PF06463 Molybdenum Cofactor Synthesis C WT60_07360 PF04055 Radical SAM superfamily WT60_07365 PF00175 Oxidoreductase NAD-binding domain WT60_07365 PF00970 Oxidoreductase FAD-binding domain WT60_07375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_07375 PF00384 Molybdopterin oxidoreductase WT60_07375 PF01568 Molydopterin dinucleotide binding domain WT60_07390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_07395 PF00528 Binding-protein-dependent transport system inner membrane component WT60_07400 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_07400 PF00528 Binding-protein-dependent transport system inner membrane component WT60_07405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_07405 PF00005 ABC transporter WT60_07410 PF00877 NlpC/P60 family WT60_07415 PF01734 Patatin-like phospholipase WT60_07420 PF00749 tRNA synthetases class I (E and Q), catalytic domain WT60_07455 PF02311 AraC-like ligand binding domain WT60_07455 PF12833 Helix-turn-helix domain WT60_07460 PF03737 Aldolase/RraA WT60_07475 PF01274 Malate synthase WT60_07480 PF13419 Haloacid dehalogenase-like hydrolase WT60_07485 PF03466 LysR substrate binding domain WT60_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_07490 PF00582 Universal stress protein family WT60_07495 PF00463 Isocitrate lyase family WT60_07500 PF00270 DEAD/DEAH box helicase WT60_07500 PF00271 Helicase conserved C-terminal domain WT60_07510 PF00814 Glycoprotease family WT60_07520 PF03167 Uracil DNA glycosylase superfamily WT60_07530 PF08543 Phosphomethylpyrimidine kinase WT60_07535 PF07690 Major Facilitator Superfamily WT60_07540 PF01168 Alanine racemase, N-terminal domain WT60_07540 PF00842 Alanine racemase, C-terminal domain WT60_07545 PF18073 Rubredoxin metal binding domain WT60_07555 PF12848 ABC transporter WT60_07555 PF00005 ABC transporter WT60_07560 PF00255 Glutathione peroxidase WT60_07570 PF13091 PLD-like domain WT60_07575 PF05175 Methyltransferase small domain WT60_07580 PF01546 Peptidase family M20/M25/M40 WT60_07580 PF07687 Peptidase dimerisation domain WT60_07585 PF03960 ArsC family WT60_07590 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_07590 PF14602 Hexapeptide repeat of succinyl-transferase WT60_07590 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WT60_07595 PF00155 Aminotransferase class I and II WT60_07605 PF06470 SMC proteins Flexible Hinge Domain WT60_07605 PF02463 RecF/RecN/SMC N terminal domain WT60_07615 PF01653 NAD-dependent DNA ligase adenylation domain WT60_07615 PF12826 Helix-hairpin-helix motif WT60_07615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WT60_07615 PF03120 NAD-dependent DNA ligase OB-fold domain WT60_07615 PF00533 BRCA1 C Terminus (BRCT) domain WT60_07620 PF01327 Polypeptide deformylase WT60_07625 PF01479 S4 domain WT60_07625 PF00849 RNA pseudouridylate synthase WT60_07630 PF01909 Nucleotidyltransferase domain WT60_07630 PF01966 HD domain WT60_07630 PF08335 GlnD PII-uridylyltransferase WT60_07635 PF00557 Metallopeptidase family M24 WT60_07640 PF00318 Ribosomal protein S2 WT60_07645 PF00889 Elongation factor TS WT60_07650 PF00696 Amino acid kinase family WT60_07655 PF01765 Ribosome recycling factor WT60_07660 PF01255 Putative undecaprenyl diphosphate synthase WT60_07670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WT60_07670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WT60_07670 PF13288 DXP reductoisomerase C-terminal domain WT60_07675 PF02163 Peptidase family M50 WT60_07675 PF17820 PDZ domain WT60_07680 PF07244 Surface antigen variable number repeat WT60_07680 PF01103 Surface antigen WT60_07690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WT60_07690 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_07695 PF07977 FabA-like domain WT60_07700 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WT60_07700 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_07705 PF02684 Lipid-A-disaccharide synthetase WT60_07710 PF01351 Ribonuclease HII WT60_07715 PF00588 SpoU rRNA Methylase family WT60_07715 PF08032 RNA 2'-O ribose methyltransferase substrate binding WT60_07720 PF03618 Kinase/pyrophosphorylase WT60_07725 PF00082 Subtilase family WT60_07725 PF09286 Pro-kumamolisin, activation domain WT60_07735 PF00391 PEP-utilising enzyme, mobile domain WT60_07735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WT60_07735 PF02896 PEP-utilising enzyme, TIM barrel domain WT60_07745 PF01145 SPFH domain / Band 7 family WT60_07745 PF16200 C-terminal region of band_7 WT60_07750 PF01668 SmpB protein WT60_07760 PF03658 RnfH family Ubiquitin WT60_07765 PF00892 EamA-like transporter family WT60_07790 PF00571 CBS domain WT60_07790 PF00478 IMP dehydrogenase / GMP reductase domain WT60_07800 PF02540 NAD synthase WT60_07800 PF00958 GMP synthase C terminal domain WT60_07800 PF00117 Glutamine amidotransferase class-I WT60_07805 PF12706 Beta-lactamase superfamily domain WT60_07815 PF12833 Helix-turn-helix domain WT60_07815 PF02311 AraC-like ligand binding domain WT60_07820 PF07690 Major Facilitator Superfamily WT60_07835 PF09350 Domain of unknown function (DUF1992) WT60_07840 PF14437 MafB19-like deaminase WT60_07845 PF17676 LD-carboxypeptidase C-terminal domain WT60_07845 PF02016 LD-carboxypeptidase N-terminal domain WT60_07850 PF07729 FCD domain WT60_07850 PF00392 Bacterial regulatory proteins, gntR family WT60_07855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin WT60_07860 PF01177 Asp/Glu/Hydantoin racemase WT60_07870 PF01014 Uricase WT60_07870 PF09349 OHCU decarboxylase WT60_07875 PF03561 Allantoicase repeat WT60_07880 PF04115 Ureidoglycolate lyase WT60_07895 PF00576 HIUase/Transthyretin family WT60_07900 PF01979 Amidohydrolase family WT60_07910 PF03466 LysR substrate binding domain WT60_07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_07915 PF07311 Dodecin WT60_07920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_07920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WT60_07930 PF01741 Large-conductance mechanosensitive channel, MscL WT60_07950 PF00905 Penicillin binding protein transpeptidase domain WT60_07950 PF00912 Transglycosylase WT60_07950 PF17092 Penicillin-binding protein OB-like domain WT60_07965 PF00291 Pyridoxal-phosphate dependent enzyme WT60_07970 PF01546 Peptidase family M20/M25/M40 WT60_07970 PF07687 Peptidase dimerisation domain WT60_07980 PF00378 Enoyl-CoA hydratase/isomerase WT60_07985 PF02559 CarD-like/TRCF domain WT60_07985 PF03461 TRCF domain WT60_07985 PF00271 Helicase conserved C-terminal domain WT60_07985 PF17757 UvrB interaction domain WT60_07985 PF00270 DEAD/DEAH box helicase WT60_07990 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WT60_07995 PF02542 YgbB family WT60_08000 PF02627 Carboxymuconolactone decarboxylase family WT60_08005 PF00578 AhpC/TSA family WT60_08010 PF00672 HAMP domain WT60_08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_08010 PF00512 His Kinase A (phospho-acceptor) domain WT60_08015 PF00486 Transcriptional regulatory protein, C terminal WT60_08015 PF00072 Response regulator receiver domain WT60_08045 PF00589 Phage integrase family WT60_08075 PF00574 Clp protease WT60_08130 PF07484 Phage Tail Collar Domain WT60_08140 PF04984 Phage tail sheath protein subtilisin-like domain WT60_08140 PF17482 Phage tail sheath C-terminal domain WT60_08185 PF00959 Phage lysozyme WT60_08235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WT60_08250 PF00850 Histone deacetylase domain WT60_08270 PF02558 Ketopantoate reductase PanE/ApbA WT60_08270 PF08546 Ketopantoate reductase PanE/ApbA C terminal WT60_08275 PF01047 MarR family WT60_08280 PF02595 Glycerate kinase family WT60_08285 PF05697 Bacterial trigger factor protein (TF) WT60_08285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WT60_08285 PF05698 Bacterial trigger factor protein (TF) C-terminus WT60_08290 PF00574 Clp protease WT60_08295 PF06689 ClpX C4-type zinc finger WT60_08295 PF07724 AAA domain (Cdc48 subfamily) WT60_08295 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_08300 PF05362 Lon protease (S16) C-terminal proteolytic domain WT60_08300 PF02190 ATP-dependent protease La (LON) substrate-binding domain WT60_08300 PF00004 ATPase family associated with various cellular activities (AAA) WT60_08335 PF13472 GDSL-like Lipase/Acylhydrolase family WT60_08340 PF00005 ABC transporter WT60_08345 PF00342 Phosphoglucose isomerase WT60_08350 PF01256 Carbohydrate kinase WT60_08355 PF01266 FAD dependent oxidoreductase WT60_08360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal WT60_08360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WT60_08360 PF02769 AIR synthase related protein, C-terminal domain WT60_08375 PF01722 BolA-like protein WT60_08380 PF04279 Intracellular septation protein A WT60_08385 PF01641 SelR domain WT60_08390 PF02696 Uncharacterized ACR, YdiU/UPF0061 family WT60_08395 PF13193 AMP-binding enzyme C-terminal domain WT60_08395 PF00501 AMP-binding enzyme WT60_08400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WT60_08400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WT60_08400 PF00378 Enoyl-CoA hydratase/isomerase WT60_08405 PF00857 Isochorismatase family WT60_08410 PF00108 Thiolase, N-terminal domain WT60_08410 PF02803 Thiolase, C-terminal domain WT60_08435 PF07690 Major Facilitator Superfamily WT60_08440 PF13419 Haloacid dehalogenase-like hydrolase WT60_08455 PF07859 alpha/beta hydrolase fold WT60_08460 PF13673 Acetyltransferase (GNAT) domain WT60_08470 PF01571 Aminomethyltransferase folate-binding domain WT60_08475 PF02618 YceG-like family WT60_08480 PF02223 Thymidylate kinase WT60_08485 PF09115 DNA polymerase III, delta subunit, C terminal WT60_08490 PF00583 Acetyltransferase (GNAT) family WT60_08495 PF01026 TatD related DNase WT60_08515 PF02463 RecF/RecN/SMC N terminal domain WT60_08520 PF13439 Glycosyltransferase Family 4 WT60_08520 PF00534 Glycosyl transferases group 1 WT60_08545 PF00710 Asparaginase, N-terminal WT60_08545 PF17763 Glutaminase/Asparaginase C-terminal domain WT60_08550 PF01476 LysM domain WT60_08550 PF04972 BON domain WT60_08560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WT60_08560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_08565 PF01261 Xylose isomerase-like TIM barrel WT60_08570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_08570 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_08570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_08575 PF03466 LysR substrate binding domain WT60_08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_08590 PF08281 Sigma-70, region 4 WT60_08590 PF04542 Sigma-70 region 2 WT60_08600 PF01250 Ribosomal protein S6 WT60_08610 PF01084 Ribosomal protein S18 WT60_08615 PF03948 Ribosomal protein L9, C-terminal domain WT60_08615 PF01281 Ribosomal protein L9, N-terminal domain WT60_08620 PF00772 DnaB-like helicase N terminal domain WT60_08620 PF03796 DnaB-like helicase C terminal domain WT60_08630 PF01384 Phosphate transporter family WT60_08640 PF00877 NlpC/P60 family WT60_08645 PF13638 PIN domain WT60_08645 PF02562 PhoH-like protein WT60_08650 PF00578 AhpC/TSA family WT60_08655 PF01522 Polysaccharide deacetylase WT60_08660 PF02911 Formyl transferase, C-terminal domain WT60_08660 PF00551 Formyl transferase WT60_08660 PF01370 NAD dependent epimerase/dehydratase family WT60_08665 PF02911 Formyl transferase, C-terminal domain WT60_08665 PF01370 NAD dependent epimerase/dehydratase family WT60_08665 PF00551 Formyl transferase WT60_08670 PF00535 Glycosyl transferase family 2 WT60_08675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WT60_08685 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase WT60_08695 PF00155 Aminotransferase class I and II WT60_08700 PF01842 ACT domain WT60_08700 PF00742 Homoserine dehydrogenase WT60_08700 PF03447 Homoserine dehydrogenase, NAD binding domain WT60_08705 PF14821 Threonine synthase N terminus WT60_08705 PF00291 Pyridoxal-phosphate dependent enzyme WT60_08715 PF00994 Probable molybdopterin binding domain WT60_08715 PF03453 MoeA N-terminal region (domain I and II) WT60_08715 PF03454 MoeA C-terminal region (domain IV) WT60_08720 PF02597 ThiS family WT60_08725 PF02391 MoaE protein WT60_08730 PF01152 Bacterial-like globin WT60_08735 PF02082 Transcriptional regulator WT60_08740 PF07724 AAA domain (Cdc48 subfamily) WT60_08740 PF02861 Clp amino terminal domain, pathogenicity island component WT60_08740 PF00004 ATPase family associated with various cellular activities (AAA) WT60_08740 PF17871 AAA lid domain WT60_08740 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_08765 PF01554 MatE WT60_08775 PF01197 Ribosomal protein L31 WT60_08780 PF06167 Glucose-regulated metallo-peptidase M90 WT60_08790 PF13411 MerR HTH family regulatory protein WT60_08795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WT60_08795 PF07498 Rho termination factor, N-terminal domain WT60_08795 PF07497 Rho termination factor, RNA-binding domain WT60_08800 PF00085 Thioredoxin WT60_08805 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding WT60_08805 PF12169 DNA polymerase III subunits gamma and tau domain III WT60_08805 PF12170 DNA polymerase III tau subunit V interacting with alpha WT60_08810 PF02575 YbaB/EbfC DNA-binding family WT60_08815 PF13662 Toprim domain WT60_08815 PF02132 RecR protein WT60_08820 PF02515 CoA-transferase family III WT60_08825 PF01975 Survival protein SurE WT60_08835 PF01551 Peptidase family M23 WT60_08835 PF01476 LysM domain WT60_08840 PF04542 Sigma-70 region 2 WT60_08840 PF04545 Sigma-70, region 4 WT60_08840 PF04539 Sigma-70 region 3 WT60_08840 PF00140 Sigma-70 factor, region 1.2 WT60_08855 PF05958 tRNA (Uracil-5-)-methyltransferase WT60_08860 PF01027 Inhibitor of apoptosis-promoting Bax1 WT60_08865 PF00334 Nucleoside diphosphate kinase WT60_08870 PF04055 Radical SAM superfamily WT60_08880 PF04551 GcpE protein WT60_08885 PF13393 Histidyl-tRNA synthetase WT60_08885 PF03129 Anticodon binding domain WT60_08890 PF09976 Tetratricopeptide repeat-like domain WT60_08895 PF13360 PQQ-like domain WT60_08905 PF01926 50S ribosome-binding GTPase WT60_08905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WT60_08910 PF17209 Hfq protein WT60_08915 PF01926 50S ribosome-binding GTPase WT60_08915 PF13167 GTP-binding GTPase N-terminal WT60_08915 PF16360 GTP-binding GTPase Middle Region WT60_08920 PF12221 Bacterial membrane protein N terminal WT60_08920 PF01145 SPFH domain / Band 7 family WT60_08925 PF01145 SPFH domain / Band 7 family WT60_08930 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) WT60_08935 PF13393 Histidyl-tRNA synthetase WT60_08940 PF00709 Adenylosuccinate synthetase WT60_08945 PF00156 Phosphoribosyl transferase domain WT60_08950 PF02705 K+ potassium transporter WT60_08955 PF16921 Tex protein YqgF-like domain WT60_08955 PF00575 S1 RNA binding domain WT60_08955 PF09371 Tex-like protein N-terminal domain WT60_08955 PF17674 HHH domain WT60_08970 PF04851 Type III restriction enzyme, res subunit WT60_08970 PF13307 Helicase C-terminal domain WT60_08975 PF13525 Outer membrane lipoprotein WT60_08980 PF01479 S4 domain WT60_08980 PF00849 RNA pseudouridylate synthase WT60_08995 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus WT60_09000 PF02803 Thiolase, C-terminal domain WT60_09000 PF00108 Thiolase, N-terminal domain WT60_09005 PF00106 short chain dehydrogenase WT60_09010 PF07879 PHB/PHA accumulation regulator DNA-binding domain WT60_09010 PF05233 PHB accumulation regulatory domain WT60_09015 PF00893 Small Multidrug Resistance protein WT60_09020 PF04055 Radical SAM superfamily WT60_09020 PF00919 Uncharacterized protein family UPF0004 WT60_09020 PF18693 TRAM domain WT60_09030 PF02803 Thiolase, C-terminal domain WT60_09030 PF00108 Thiolase, N-terminal domain WT60_09040 PF01053 Cys/Met metabolism PLP-dependent enzyme WT60_09055 PF03649 Uncharacterised protein family (UPF0014) WT60_09060 PF00005 ABC transporter WT60_09065 PF05170 AsmA family WT60_09070 PF12848 ABC transporter WT60_09070 PF00005 ABC transporter WT60_09080 PF00171 Aldehyde dehydrogenase family WT60_09085 PF03060 Nitronate monooxygenase WT60_09090 PF03922 OmpW family WT60_09100 PF01566 Natural resistance-associated macrophage protein WT60_09105 PF13416 Bacterial extracellular solute-binding protein WT60_09110 PF08402 TOBE domain WT60_09110 PF00005 ABC transporter WT60_09115 PF00528 Binding-protein-dependent transport system inner membrane component WT60_09120 PF00528 Binding-protein-dependent transport system inner membrane component WT60_09135 PF00753 Metallo-beta-lactamase superfamily WT60_09140 PF02954 Bacterial regulatory protein, Fis family WT60_09140 PF00158 Sigma-54 interaction domain WT60_09140 PF00072 Response regulator receiver domain WT60_09145 PF01804 Penicillin amidase WT60_09150 PF07690 Major Facilitator Superfamily WT60_09155 PF01212 Beta-eliminating lyase WT60_09160 PF00668 Condensation domain WT60_09160 PF00550 Phosphopantetheine attachment site WT60_09160 PF13193 AMP-binding enzyme C-terminal domain WT60_09160 PF00501 AMP-binding enzyme WT60_09165 PF07993 Male sterility protein WT60_09165 PF00550 Phosphopantetheine attachment site WT60_09165 PF13193 AMP-binding enzyme C-terminal domain WT60_09165 PF00501 AMP-binding enzyme WT60_09165 PF00668 Condensation domain WT60_09170 PF00206 Lyase WT60_09170 PF02655 ATP-grasp domain WT60_09175 PF00291 Pyridoxal-phosphate dependent enzyme WT60_09185 PF13537 Glutamine amidotransferase domain WT60_09185 PF00733 Asparagine synthase WT60_09190 PF13193 AMP-binding enzyme C-terminal domain WT60_09190 PF00668 Condensation domain WT60_09190 PF00975 Thioesterase domain WT60_09190 PF00501 AMP-binding enzyme WT60_09190 PF00550 Phosphopantetheine attachment site WT60_09205 PF00873 AcrB/AcrD/AcrF family WT60_09210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_09215 PF00440 Bacterial regulatory proteins, tetR family WT60_09215 PF08361 MAATS-type transcriptional repressor, C-terminal region WT60_09220 PF00654 Voltage gated chloride channel WT60_09225 PF03601 Conserved hypothetical protein 698 WT60_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_09230 PF03466 LysR substrate binding domain WT60_09245 PF00294 pfkB family carbohydrate kinase WT60_09250 PF07690 Major Facilitator Superfamily WT60_09255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_09255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_09260 PF00356 Bacterial regulatory proteins, lacI family WT60_09330 PF01544 CorA-like Mg2+ transporter protein WT60_09335 PF03795 YCII-related domain WT60_09355 PF00924 Mechanosensitive ion channel WT60_09355 PF12794 Mechanosensitive ion channel inner membrane domain 1 WT60_09355 PF12795 Mechanosensitive ion channel porin domain WT60_09360 PF12801 4Fe-4S binding domain WT60_09360 PF04205 FMN-binding domain WT60_09385 PF12679 ABC-2 family transporter protein WT60_09390 PF00005 ABC transporter WT60_09400 PF13473 Cupredoxin-like domain WT60_09400 PF18764 Nitrous oxide reductase propeller repeat WT60_09400 PF18793 Nitrous oxide reductase propeller repeat 2 WT60_09405 PF02424 ApbE family WT60_09410 PF00005 ABC transporter WT60_09440 PF00561 alpha/beta hydrolase fold WT60_09445 PF01527 Transposase WT60_09450 PF13683 Integrase core domain WT60_09450 PF13276 HTH-like domain WT60_09475 PF00072 Response regulator receiver domain WT60_09475 PF00196 Bacterial regulatory proteins, luxR family WT60_09480 PF07730 Histidine kinase WT60_09480 PF13492 GAF domain WT60_09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_09490 PF01547 Bacterial extracellular solute-binding protein WT60_09495 PF00933 Glycosyl hydrolase family 3 N terminal domain WT60_09495 PF01915 Glycosyl hydrolase family 3 C-terminal domain WT60_09495 PF14310 Fibronectin type III-like domain WT60_09500 PF00171 Aldehyde dehydrogenase family WT60_09510 PF13609 Gram-negative porin WT60_09515 PF00920 Dehydratase family WT60_09520 PF08450 SMP-30/Gluconolactonase/LRE-like region WT60_09530 PF00005 ABC transporter WT60_09530 PF17912 MalK OB fold domain WT60_09535 PF00528 Binding-protein-dependent transport system inner membrane component WT60_09540 PF00528 Binding-protein-dependent transport system inner membrane component WT60_09550 PF00356 Bacterial regulatory proteins, lacI family WT60_09555 PF13609 Gram-negative porin WT60_09565 PF01584 CheW-like domain WT60_09570 PF00672 HAMP domain WT60_09570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_09570 PF02203 Tar ligand binding domain homologue WT60_09580 PF00501 AMP-binding enzyme WT60_09580 PF13193 AMP-binding enzyme C-terminal domain WT60_09585 PF07690 Major Facilitator Superfamily WT60_09595 PF08241 Methyltransferase domain WT60_09600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system WT60_09605 PF00528 Binding-protein-dependent transport system inner membrane component WT60_09610 PF00005 ABC transporter WT60_09615 PF00528 Binding-protein-dependent transport system inner membrane component WT60_09630 PF13520 Amino acid permease WT60_09640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WT60_09640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WT60_09645 PF00696 Amino acid kinase family WT60_09650 PF00106 short chain dehydrogenase WT60_09655 PF03928 Haem-degrading WT60_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_09660 PF03466 LysR substrate binding domain WT60_09665 PF02798 Glutathione S-transferase, N-terminal domain WT60_09670 PF01047 MarR family WT60_09675 PF07690 Major Facilitator Superfamily WT60_09685 PF02638 Glycosyl hydrolase-like 10 WT60_09690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_09695 PF02571 Precorrin-6x reductase CbiJ/CobK WT60_09700 PF01888 CbiD WT60_09705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_09710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WT60_09710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WT60_09715 PF02570 Precorrin-8X methylmutase WT60_09720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_09725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_09730 PF02839 Carbohydrate binding domain WT60_09745 PF02230 Phospholipase/Carboxylesterase WT60_09750 PF13519 von Willebrand factor type A domain WT60_09750 PF17863 AAA lid domain WT60_09755 PF17863 AAA lid domain WT60_09755 PF13519 von Willebrand factor type A domain WT60_09755 PF07728 AAA domain (dynein-related subfamily) WT60_09760 PF02514 CobN/Magnesium Chelatase WT60_09765 PF07683 Cobalamin synthesis protein cobW C-terminal domain WT60_09765 PF02492 CobW/HypB/UreG, nucleotide-binding domain WT60_09770 PF03824 High-affinity nickel-transport protein WT60_09785 PF12557 Cob(I)alamin adenosyltransferase N terminal WT60_09785 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP WT60_09790 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WT60_09790 PF07685 CobB/CobQ-like glutamine amidotransferase domain WT60_09805 PF00551 Formyl transferase WT60_09810 PF07715 TonB-dependent Receptor Plug Domain WT60_09810 PF00593 TonB dependent receptor WT60_09815 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) WT60_09820 PF13193 AMP-binding enzyme C-terminal domain WT60_09820 PF00501 AMP-binding enzyme WT60_09820 PF00550 Phosphopantetheine attachment site WT60_09820 PF00668 Condensation domain WT60_09825 PF00550 Phosphopantetheine attachment site WT60_09825 PF13193 AMP-binding enzyme C-terminal domain WT60_09825 PF00501 AMP-binding enzyme WT60_09825 PF00668 Condensation domain WT60_09830 PF00005 ABC transporter WT60_09830 PF00664 ABC transporter transmembrane region WT60_09835 PF01497 Periplasmic binding protein WT60_09845 PF01032 FecCD transport family WT60_09850 PF00005 ABC transporter WT60_09860 PF03621 MbtH-like protein WT60_09885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WT60_09885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WT60_09890 PF08240 Alcohol dehydrogenase GroES-like domain WT60_09890 PF00107 Zinc-binding dehydrogenase WT60_09900 PF02653 Branched-chain amino acid transport system / permease component WT60_09905 PF00005 ABC transporter WT60_09910 PF13407 Periplasmic binding protein domain WT60_09930 PF00664 ABC transporter transmembrane region WT60_09930 PF00005 ABC transporter WT60_09940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WT60_09940 PF02753 Pili assembly chaperone PapD, C-terminal domain WT60_09945 PF00577 Outer membrane usher protein WT60_09945 PF13953 PapC C-terminal domain WT60_09945 PF13954 PapC N-terminal domain WT60_09950 PF00419 Fimbrial protein WT60_09960 PF02321 Outer membrane efflux protein WT60_09965 PF00873 AcrB/AcrD/AcrF family WT60_09970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_09970 PF00529 HlyD membrane-fusion protein of T1SS WT60_09975 PF08361 MAATS-type transcriptional repressor, C-terminal region WT60_09975 PF00440 Bacterial regulatory proteins, tetR family WT60_09980 PF01551 Peptidase family M23 WT60_09980 PF01476 LysM domain WT60_09980 PF08525 Opacity-associated protein A N-terminal motif WT60_10025 PF00437 Type II/IV secretion system protein WT60_10040 PF04972 BON domain WT60_10040 PF00263 Bacterial type II and III secretion system protein WT60_10040 PF13629 Pilus formation protein N terminal region WT60_10060 PF00528 Binding-protein-dependent transport system inner membrane component WT60_10065 PF00005 ABC transporter WT60_10075 PF00083 Sugar (and other) transporter WT60_10080 PF04293 SpoVR like protein WT60_10085 PF04285 Protein of unknown function (DUF444) WT60_10090 PF08298 PrkA AAA domain WT60_10090 PF06798 PrkA serine protein kinase C-terminal domain WT60_10095 PF00672 HAMP domain WT60_10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_10095 PF02203 Tar ligand binding domain homologue WT60_10100 PF00294 pfkB family carbohydrate kinase WT60_10105 PF00356 Bacterial regulatory proteins, lacI family WT60_10110 PF02653 Branched-chain amino acid transport system / permease component WT60_10115 PF00005 ABC transporter WT60_10120 PF13407 Periplasmic binding protein domain WT60_10130 PF03466 LysR substrate binding domain WT60_10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_10135 PF12857 TOBE-like domain WT60_10135 PF00005 ABC transporter WT60_10140 PF00528 Binding-protein-dependent transport system inner membrane component WT60_10145 PF00528 Binding-protein-dependent transport system inner membrane component WT60_10155 PF01726 LexA DNA binding domain WT60_10155 PF00717 Peptidase S24-like WT60_10175 PF00005 ABC transporter WT60_10180 PF01061 ABC-2 type transporter WT60_10190 PF03773 Predicted permease WT60_10195 PF00248 Aldo/keto reductase family WT60_10205 PF01638 HxlR-like helix-turn-helix WT60_10210 PF00375 Sodium:dicarboxylate symporter family WT60_10215 PF01207 Dihydrouridine synthase (Dus) WT60_10235 PF03459 TOBE domain WT60_10240 PF00005 ABC transporter WT60_10245 PF00528 Binding-protein-dependent transport system inner membrane component WT60_10250 PF00296 Luciferase-like monooxygenase WT60_10265 PF00893 Small Multidrug Resistance protein WT60_10270 PF03928 Haem-degrading WT60_10285 PF09297 NADH pyrophosphatase zinc ribbon domain WT60_10285 PF00293 NUDIX domain WT60_10290 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WT60_10295 PF04377 Arginine-tRNA-protein transferase, C terminus WT60_10295 PF04376 Arginine-tRNA-protein transferase, N terminus WT60_10300 PF01180 Dihydroorotate dehydrogenase WT60_10315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WT60_10315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WT60_10320 PF07729 FCD domain WT60_10320 PF00392 Bacterial regulatory proteins, gntR family WT60_10325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WT60_10330 PF01510 N-acetylmuramoyl-L-alanine amidase WT60_10335 PF00588 SpoU rRNA Methylase family WT60_10335 PF08032 RNA 2'-O ribose methyltransferase substrate binding WT60_10340 PF08461 Ribonuclease R winged-helix domain WT60_10340 PF00773 RNB domain WT60_10340 PF08206 Ribonuclease B OB domain WT60_10340 PF00575 S1 RNA binding domain WT60_10340 PF17876 Cold shock domain WT60_10365 PF01740 STAS domain WT60_10365 PF00916 Sulfate permease family WT60_10375 PF13673 Acetyltransferase (GNAT) domain WT60_10375 PF13302 Acetyltransferase (GNAT) domain WT60_10375 PF03352 Methyladenine glycosylase WT60_10375 PF00117 Glutamine amidotransferase class-I WT60_10375 PF00958 GMP synthase C terminal domain WT60_10380 PF07690 Major Facilitator Superfamily WT60_10385 PF00440 Bacterial regulatory proteins, tetR family WT60_10390 PF00501 AMP-binding enzyme WT60_10390 PF13193 AMP-binding enzyme C-terminal domain WT60_10405 PF17209 Hfq protein WT60_10415 PF00072 Response regulator receiver domain WT60_10415 PF00158 Sigma-54 interaction domain WT60_10415 PF02954 Bacterial regulatory protein, Fis family WT60_10445 PF00437 Type II/IV secretion system protein WT60_10455 PF04972 BON domain WT60_10455 PF00263 Bacterial type II and III secretion system protein WT60_10455 PF13629 Pilus formation protein N terminal region WT60_10505 PF03969 AFG1-like ATPase WT60_10510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WT60_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_10515 PF02817 e3 binding domain WT60_10515 PF00364 Biotin-requiring enzyme WT60_10515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WT60_10520 PF16870 2-oxoglutarate dehydrogenase C-terminal WT60_10520 PF02779 Transketolase, pyrimidine binding domain WT60_10520 PF00676 Dehydrogenase E1 component WT60_10520 PF16078 2-oxoglutarate dehydrogenase N-terminus WT60_10530 PF01047 MarR family WT60_10535 PF02321 Outer membrane efflux protein WT60_10540 PF00529 HlyD membrane-fusion protein of T1SS WT60_10540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_10545 PF07690 Major Facilitator Superfamily WT60_10550 PF01509 TruB family pseudouridylate synthase (N terminal domain) WT60_10550 PF16198 tRNA pseudouridylate synthase B C-terminal domain WT60_10550 PF09157 Pseudouridine synthase II TruB, C-terminal WT60_10555 PF02033 Ribosome-binding factor A WT60_10560 PF08364 Bacterial translation initiation factor IF-2 associated region WT60_10560 PF11987 Translation-initiation factor 2 WT60_10560 PF00009 Elongation factor Tu GTP binding domain WT60_10560 PF04760 Translation initiation factor IF-2, N-terminal region WT60_10565 PF08529 NusA N-terminal domain WT60_10565 PF13184 NusA-like KH domain WT60_10570 PF02576 RimP N-terminal domain WT60_10570 PF17384 RimP C-terminal SH3 domain WT60_10575 PF00849 RNA pseudouridylate synthase WT60_10575 PF01479 S4 domain WT60_10580 PF04079 Segregation and condensation complex subunit ScpB WT60_10585 PF03466 LysR substrate binding domain WT60_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_10625 PF06804 NlpB/DapX lipoprotein WT60_10655 PF00216 Bacterial DNA-binding protein WT60_10660 PF03484 tRNA synthetase B5 domain WT60_10660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WT60_10660 PF03147 Ferredoxin-fold anticodon binding domain WT60_10660 PF03483 B3/4 domain WT60_10660 PF01588 Putative tRNA binding domain WT60_10665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WT60_10665 PF01409 tRNA synthetases class II core domain (F) WT60_10670 PF00453 Ribosomal protein L20 WT60_10675 PF01632 Ribosomal protein L35 WT60_10680 PF00707 Translation initiation factor IF-3, C-terminal domain WT60_10680 PF05198 Translation initiation factor IF-3, N-terminal domain WT60_10685 PF03129 Anticodon binding domain WT60_10685 PF02824 TGS domain WT60_10685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WT60_10685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WT60_10695 PF13291 ACT domain WT60_10695 PF04607 Region found in RelA / SpoT proteins WT60_10695 PF02824 TGS domain WT60_10700 PF01042 Endoribonuclease L-PSP WT60_10715 PF01144 Coenzyme A transferase WT60_10720 PF01144 Coenzyme A transferase WT60_10750 PF01264 Chorismate synthase WT60_10755 PF07690 Major Facilitator Superfamily WT60_10770 PF03631 Virulence factor BrkB WT60_10775 PF03358 NADPH-dependent FMN reductase WT60_10785 PF02913 FAD linked oxidases, C-terminal domain WT60_10785 PF01565 FAD binding domain WT60_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_10795 PF03466 LysR substrate binding domain WT60_10800 PF02321 Outer membrane efflux protein WT60_10805 PF04632 Fusaric acid resistance protein family WT60_10815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_10820 PF00672 HAMP domain WT60_10820 PF02203 Tar ligand binding domain homologue WT60_10820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_10825 PF07690 Major Facilitator Superfamily WT60_10830 PF01048 Phosphorylase superfamily WT60_10835 PF13361 UvrD-like helicase C-terminal domain WT60_10835 PF00580 UvrD/REP helicase N-terminal domain WT60_10840 PF08264 Anticodon-binding domain of tRNA WT60_10840 PF10458 Valyl tRNA synthetase tRNA binding arm WT60_10840 PF00133 tRNA synthetases class I (I, L, M and V) WT60_10845 PF00483 Nucleotidyl transferase WT60_10855 PF00512 His Kinase A (phospho-acceptor) domain WT60_10855 PF14827 Double sensory domain of two-component sensor kinase WT60_10855 PF13426 PAS domain WT60_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_10855 PF00672 HAMP domain WT60_10865 PF00072 Response regulator receiver domain WT60_10865 PF00486 Transcriptional regulatory protein, C terminal WT60_10875 PF01206 Sulfurtransferase TusA WT60_10880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WT60_10880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WT60_10885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WT60_10885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WT60_10890 PF01380 SIS domain WT60_10890 PF01418 Helix-turn-helix domain, rpiR family WT60_10900 PF02653 Branched-chain amino acid transport system / permease component WT60_10905 PF00005 ABC transporter WT60_10910 PF00294 pfkB family carbohydrate kinase WT60_10915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_10915 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_10915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_10925 PF04962 KduI/IolB family WT60_10930 PF00005 ABC transporter WT60_10935 PF00005 ABC transporter WT60_10935 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_10940 PF02653 Branched-chain amino acid transport system / permease component WT60_10945 PF03061 Thioesterase superfamily WT60_10950 PF00465 Iron-containing alcohol dehydrogenase WT60_10955 PF01906 Putative heavy-metal-binding WT60_10965 PF17820 PDZ domain WT60_10965 PF13180 PDZ domain WT60_10970 PF06779 Uncharacterised MFS-type transporter YbfB WT60_10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_10975 PF03466 LysR substrate binding domain WT60_10985 PF02272 DHHA1 domain WT60_10985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WT60_10985 PF01411 tRNA synthetases class II (A) WT60_10990 PF02515 CoA-transferase family III WT60_11000 PF00749 tRNA synthetases class I (E and Q), catalytic domain WT60_11000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WT60_11005 PF00293 NUDIX domain WT60_11015 PF00933 Glycosyl hydrolase family 3 N terminal domain WT60_11025 PF00034 Cytochrome c WT60_11025 PF03150 Di-haem cytochrome c peroxidase WT60_11030 PF05506 Domain of unknown function (DUF756) WT60_11030 PF04185 Phosphoesterase family WT60_11040 PF07055 Enoyl reductase FAD binding domain WT60_11040 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase WT60_11040 PF12241 Trans-2-enoyl-CoA reductase catalytic region WT60_11045 PF00196 Bacterial regulatory proteins, luxR family WT60_11045 PF00072 Response regulator receiver domain WT60_11050 PF00512 His Kinase A (phospho-acceptor) domain WT60_11050 PF01627 Hpt domain WT60_11050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) WT60_11050 PF00672 HAMP domain WT60_11050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_11050 PF00072 Response regulator receiver domain WT60_11085 PF03466 LysR substrate binding domain WT60_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_11095 PF04909 Amidohydrolase WT60_11100 PF00816 H-NS histone family WT60_11105 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_11105 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_11105 PF01610 Transposase WT60_11130 PF00872 Transposase, Mutator family WT60_11145 PF04717 Type VI secretion system, phage-baseplate injector WT60_11170 PF16671 Actin cross-linking domain WT60_11170 PF04717 Type VI secretion system, phage-baseplate injector WT60_11235 PF04717 Type VI secretion system, phage-baseplate injector WT60_11270 PF07724 AAA domain (Cdc48 subfamily) WT60_11270 PF00004 ATPase family associated with various cellular activities (AAA) WT60_11270 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_11270 PF17871 AAA lid domain WT60_11285 PF05638 Type VI secretion system effector, Hcp WT60_11300 PF13488 Glycine zipper WT60_11300 PF00691 OmpA family WT60_11315 PF00005 ABC transporter WT60_11315 PF17755 UvrA DNA-binding domain WT60_11315 PF17760 UvrA interaction domain WT60_11335 PF02673 Bacitracin resistance protein BacA WT60_11345 PF01476 LysM domain WT60_11345 PF01551 Peptidase family M23 WT60_11350 PF13193 AMP-binding enzyme C-terminal domain WT60_11350 PF00501 AMP-binding enzyme WT60_11365 PF01554 MatE WT60_11530 PF03354 Phage Terminase WT60_11610 PF01555 DNA methylase WT60_11750 PF02541 Ppx/GppA phosphatase family WT60_11755 PF02503 Polyphosphate kinase middle domain WT60_11755 PF13089 Polyphosphate kinase N-terminal domain WT60_11755 PF17941 Polyphosphate kinase C-terminal domain 1 WT60_11755 PF13090 Polyphosphate kinase C-terminal domain 2 WT60_11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_11760 PF11808 Phosphate regulon sensor protein PhoR WT60_11760 PF00512 His Kinase A (phospho-acceptor) domain WT60_11760 PF00989 PAS fold WT60_11765 PF00072 Response regulator receiver domain WT60_11765 PF00486 Transcriptional regulatory protein, C terminal WT60_11770 PF01895 PhoU domain WT60_11775 PF00005 ABC transporter WT60_11780 PF00528 Binding-protein-dependent transport system inner membrane component WT60_11785 PF00528 Binding-protein-dependent transport system inner membrane component WT60_11790 PF12849 PBP superfamily domain WT60_11795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WT60_11795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WT60_11795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WT60_11795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WT60_11800 PF00809 Pterin binding enzyme WT60_11805 PF06480 FtsH Extracellular WT60_11805 PF17862 AAA+ lid domain WT60_11805 PF00004 ATPase family associated with various cellular activities (AAA) WT60_11805 PF01434 Peptidase family M41 WT60_11810 PF01728 FtsJ-like methyltransferase WT60_11815 PF01985 CRS1 / YhbY (CRM) domain WT60_11825 PF01272 Transcription elongation factor, GreA/GreB, C-term WT60_11825 PF03449 Transcription elongation factor, N-terminal WT60_11830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WT60_11830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WT60_11830 PF02142 MGS-like domain WT60_11835 PF01810 LysE type translocator WT60_11840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WT60_11840 PF00117 Glutamine amidotransferase class-I WT60_11845 PF12833 Helix-turn-helix domain WT60_11845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term WT60_11860 PF01476 LysM domain WT60_11860 PF01464 Transglycosylase SLT domain WT60_11865 PF16123 Hydroxyacylglutathione hydrolase C-terminus WT60_11865 PF00753 Metallo-beta-lactamase superfamily WT60_11870 PF08241 Methyltransferase domain WT60_11875 PF00075 RNase H WT60_11880 PF00929 Exonuclease WT60_11890 PF02694 Uncharacterised BCR, YnfA/UPF0060 family WT60_11895 PF08946 Osmosensory transporter coiled coil WT60_11895 PF00083 Sugar (and other) transporter WT60_11915 PF13091 PLD-like domain WT60_11920 PF00698 Acyl transferase domain WT60_11925 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase WT60_11930 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG WT60_11940 PF01039 Carboxyl transferase domain WT60_11945 PF06857 Malonate decarboxylase delta subunit (MdcD) WT60_11950 PF16957 Malonate decarboxylase, alpha subunit, transporter WT60_11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_11965 PF03466 LysR substrate binding domain WT60_11975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WT60_11975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WT60_11985 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain WT60_11985 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain WT60_12005 PF00011 Hsp20/alpha crystallin family WT60_12015 PF00155 Aminotransferase class I and II WT60_12015 PF00392 Bacterial regulatory proteins, gntR family WT60_12025 PF02371 Transposase IS116/IS110/IS902 family WT60_12025 PF01548 Transposase WT60_12040 PF03466 LysR substrate binding domain WT60_12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_12050 PF03055 Retinal pigment epithelial membrane protein WT60_12070 PF00990 Diguanylate cyclase, GGDEF domain WT60_12070 PF00072 Response regulator receiver domain WT60_12090 PF00356 Bacterial regulatory proteins, lacI family WT60_12115 PF00528 Binding-protein-dependent transport system inner membrane component WT60_12120 PF08402 TOBE domain WT60_12120 PF00005 ABC transporter WT60_12125 PF00149 Calcineurin-like phosphoesterase WT60_12140 PF07690 Major Facilitator Superfamily WT60_12145 PF00892 EamA-like transporter family WT60_12155 PF00174 Oxidoreductase molybdopterin binding domain WT60_12160 PF01292 Prokaryotic cytochrome b561 WT60_12175 PF13667 ThiC-associated domain WT60_12175 PF01964 Radical SAM ThiC family WT60_12205 PF00563 EAL domain WT60_12205 PF12792 CSS motif domain associated with EAL WT60_12210 PF00472 RF-1 domain WT60_12215 PF13538 UvrD-like helicase C-terminal domain WT60_12220 PF13361 UvrD-like helicase C-terminal domain WT60_12220 PF00580 UvrD/REP helicase N-terminal domain WT60_12220 PF12705 PD-(D/E)XK nuclease superfamily WT60_12225 PF17946 RecC C-terminal domain WT60_12235 PF00324 Amino acid permease WT60_12240 PF13416 Bacterial extracellular solute-binding protein WT60_12245 PF00528 Binding-protein-dependent transport system inner membrane component WT60_12250 PF00005 ABC transporter WT60_12250 PF08402 TOBE domain WT60_12255 PF01037 Lrp/AsnC ligand binding domain WT60_12255 PF13404 AsnC-type helix-turn-helix domain WT60_12265 PF00924 Mechanosensitive ion channel WT60_12275 PF01370 NAD dependent epimerase/dehydratase family WT60_12275 PF00391 PEP-utilising enzyme, mobile domain WT60_12280 PF02082 Transcriptional regulator WT60_12300 PF13533 Biotin-lipoyl like WT60_12305 PF00873 AcrB/AcrD/AcrF family WT60_12310 PF00873 AcrB/AcrD/AcrF family WT60_12320 PF00578 AhpC/TSA family WT60_12325 PF00563 EAL domain WT60_12325 PF03707 Bacterial signalling protein N terminal repeat WT60_12325 PF00990 Diguanylate cyclase, GGDEF domain WT60_12335 PF00034 Cytochrome c WT60_12340 PF00115 Cytochrome C and Quinol oxidase polypeptide I WT60_12355 PF00034 Cytochrome c WT60_12355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WT60_12360 PF00034 Cytochrome c WT60_12375 PF01758 Sodium Bile acid symporter family WT60_12380 PF03960 ArsC family WT60_12385 PF17200 Single Cache domain 2 WT60_12385 PF07730 Histidine kinase WT60_12390 PF09084 NMT1/THI5 like WT60_12400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_12400 PF01842 ACT domain WT60_12400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_12405 PF12833 Helix-turn-helix domain WT60_12405 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term WT60_12415 PF00557 Metallopeptidase family M24 WT60_12415 PF01321 Creatinase/Prolidase N-terminal domain WT60_12420 PF01321 Creatinase/Prolidase N-terminal domain WT60_12420 PF00557 Metallopeptidase family M24 WT60_12460 PF00196 Bacterial regulatory proteins, luxR family WT60_12460 PF00072 Response regulator receiver domain WT60_12475 PF00246 Zinc carboxypeptidase WT60_12475 PF18027 Cytosolic carboxypeptidase N-terminal domain WT60_12480 PF03883 Peroxide stress protein YaaA WT60_12490 PF00155 Aminotransferase class I and II WT60_12495 PF14497 Glutathione S-transferase, C-terminal domain WT60_12495 PF13417 Glutathione S-transferase, N-terminal domain WT60_12500 PF00378 Enoyl-CoA hydratase/isomerase WT60_12505 PF00300 Histidine phosphatase superfamily (branch 1) WT60_12515 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_12515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_12515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_12525 PF01575 MaoC like domain WT60_12530 PF00171 Aldehyde dehydrogenase family WT60_12530 PF01575 MaoC like domain WT60_12535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_12535 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_12535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_12540 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_12540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_12540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_12550 PF00293 NUDIX domain WT60_12560 PF00361 Proton-conducting membrane transporter WT60_12565 PF00361 Proton-conducting membrane transporter WT60_12565 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus WT60_12570 PF00361 Proton-conducting membrane transporter WT60_12570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WT60_12575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WT60_12580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WT60_12585 PF12838 4Fe-4S dicluster domain WT60_12590 PF00146 NADH dehydrogenase WT60_12595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WT60_12595 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WT60_12595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WT60_12595 PF00384 Molybdopterin oxidoreductase WT60_12595 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WT60_12595 PF00384 Molybdopterin oxidoreductase WT60_12600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WT60_12600 PF10531 SLBB domain WT60_12600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WT60_12610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WT60_12615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WT60_12620 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WT60_12625 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WT60_12635 PF03840 Preprotein translocase SecG subunit WT60_12640 PF00121 Triosephosphate isomerase WT60_12645 PF14765 Polyketide synthase dehydratase WT60_12645 PF08240 Alcohol dehydrogenase GroES-like domain WT60_12645 PF00550 Phosphopantetheine attachment site WT60_12645 PF00698 Acyl transferase domain WT60_12645 PF16197 Ketoacyl-synthetase C-terminal extension WT60_12645 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_12645 PF08659 KR domain WT60_12645 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_12650 PF03725 3' exoribonuclease family, domain 2 WT60_12650 PF00013 KH domain WT60_12650 PF00575 S1 RNA binding domain WT60_12650 PF01138 3' exoribonuclease family, domain 1 WT60_12650 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WT60_12655 PF00312 Ribosomal protein S15 WT60_12660 PF13458 Periplasmic binding protein WT60_12670 PF00484 Carbonic anhydrase WT60_12675 PF00916 Sulfate permease family WT60_12675 PF01740 STAS domain WT60_12680 PF00682 HMGL-like WT60_12680 PF08502 LeuA allosteric (dimerisation) domain WT60_12685 PF01066 CDP-alcohol phosphatidyltransferase WT60_12690 PF02666 Phosphatidylserine decarboxylase WT60_12695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WT60_12695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain WT60_12700 PF10369 Small subunit of acetolactate synthase WT60_12705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_12705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_12705 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_12735 PF00534 Glycosyl transferases group 1 WT60_12735 PF13439 Glycosyltransferase Family 4 WT60_12740 PF01219 Prokaryotic diacylglycerol kinase WT60_12745 PF08360 QacR-like protein, C-terminal region WT60_12745 PF00440 Bacterial regulatory proteins, tetR family WT60_12750 PF03641 Possible lysine decarboxylase WT60_12760 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase WT60_12770 PF13609 Gram-negative porin WT60_12775 PF07690 Major Facilitator Superfamily WT60_12780 PF01425 Amidase WT60_12790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WT60_12790 PF01411 tRNA synthetases class II (A) WT60_12790 PF02272 DHHA1 domain WT60_12810 PF00893 Small Multidrug Resistance protein WT60_12820 PF00072 Response regulator receiver domain WT60_12820 PF00486 Transcriptional regulatory protein, C terminal WT60_12830 PF02669 K+-transporting ATPase, c chain WT60_12840 PF03814 Potassium-transporting ATPase A subunit WT60_12855 PF00107 Zinc-binding dehydrogenase WT60_12855 PF08240 Alcohol dehydrogenase GroES-like domain WT60_12865 PF02142 MGS-like domain WT60_12880 PF01709 Transcriptional regulator WT60_12885 PF02844 Phosphoribosylglycinamide synthetase, N domain WT60_12885 PF02843 Phosphoribosylglycinamide synthetase, C domain WT60_12885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WT60_12890 PF01218 Coproporphyrinogen III oxidase WT60_12895 PF01467 Cytidylyltransferase-like WT60_12905 PF02590 Predicted SPOUT methyltransferase WT60_12910 PF02545 Maf-like protein WT60_12915 PF10150 Ribonuclease E/G family WT60_12915 PF00575 S1 RNA binding domain WT60_12930 PF00860 Permease family WT60_12955 PF07690 Major Facilitator Superfamily WT60_12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_12960 PF03466 LysR substrate binding domain WT60_12965 PF12680 SnoaL-like domain WT60_12965 PF04542 Sigma-70 region 2 WT60_12965 PF08281 Sigma-70, region 4 WT60_12970 PF02627 Carboxymuconolactone decarboxylase family WT60_12980 PF07690 Major Facilitator Superfamily WT60_12995 PF00535 Glycosyl transferase family 2 WT60_13000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WT60_13005 PF17102 Stealth protein CR3, conserved region 3 WT60_13005 PF00534 Glycosyl transferases group 1 WT60_13005 PF17103 Stealth protein CR4, conserved region 4 WT60_13005 PF17101 Stealth protein CR1, conserved region 1 WT60_13005 PF11380 Stealth protein CR2, conserved region 2 WT60_13020 PF13439 Glycosyltransferase Family 4 WT60_13020 PF00534 Glycosyl transferases group 1 WT60_13025 PF00005 ABC transporter WT60_13025 PF00664 ABC transporter transmembrane region WT60_13030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WT60_13030 PF02811 PHP domain WT60_13030 PF14579 Helix-hairpin-helix motif WT60_13030 PF01336 OB-fold nucleic acid binding domain WT60_13030 PF07733 Bacterial DNA polymerase III alpha NTPase domain WT60_13040 PF00749 tRNA synthetases class I (E and Q), catalytic domain WT60_13045 PF00271 Helicase conserved C-terminal domain WT60_13045 PF00270 DEAD/DEAH box helicase WT60_13050 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme WT60_13060 PF01370 NAD dependent epimerase/dehydratase family WT60_13060 PF02222 ATP-grasp domain WT60_13070 PF17854 FtsK alpha domain WT60_13070 PF09397 Ftsk gamma domain WT60_13070 PF01580 FtsK/SpoIIIE family WT60_13070 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WT60_13075 PF10282 Lactonase, 7-bladed beta-propeller WT60_13080 PF00723 Glycosyl hydrolases family 15 WT60_13090 PF17938 Tetracyclin repressor-like, C-terminal domain WT60_13090 PF00440 Bacterial regulatory proteins, tetR family WT60_13095 PF04060 Putative Fe-S cluster WT60_13100 PF10576 Iron-sulfur binding domain of endonuclease III WT60_13100 PF00633 Helix-hairpin-helix motif WT60_13100 PF00730 HhH-GPD superfamily base excision DNA repair protein WT60_13110 PF00892 EamA-like transporter family WT60_13120 PF00034 Cytochrome c WT60_13125 PF00034 Cytochrome c WT60_13130 PF17871 AAA lid domain WT60_13130 PF02861 Clp amino terminal domain, pathogenicity island component WT60_13130 PF07724 AAA domain (Cdc48 subfamily) WT60_13130 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_13130 PF00004 ATPase family associated with various cellular activities (AAA) WT60_13140 PF03594 Benzoate membrane transport protein WT60_13145 PF00923 Transaldolase/Fructose-6-phosphate aldolase WT60_13155 PF00474 Sodium:solute symporter family WT60_13165 PF13847 Methyltransferase domain WT60_13175 PF04345 Chorismate lyase WT60_13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_13180 PF00183 Hsp90 protein WT60_13185 PF00155 Aminotransferase class I and II WT60_13195 PF00892 EamA-like transporter family WT60_13200 PF00155 Aminotransferase class I and II WT60_13210 PF02567 Phenazine biosynthesis-like protein WT60_13215 PF00990 Diguanylate cyclase, GGDEF domain WT60_13215 PF03707 Bacterial signalling protein N terminal repeat WT60_13215 PF00563 EAL domain WT60_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_13235 PF03466 LysR substrate binding domain WT60_13250 PF00521 DNA gyrase/topoisomerase IV, subunit A WT60_13255 PF00204 DNA gyrase B WT60_13255 PF00986 DNA gyrase B subunit, carboxyl terminus WT60_13255 PF01751 Toprim domain WT60_13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_13270 PF00301 Rubredoxin WT60_13295 PF00589 Phage integrase family WT60_13295 PF13356 Arm DNA-binding domain WT60_13310 PF08401 Domain of unknown function (DUF1738) WT60_13310 PF13362 Toprim domain WT60_13310 PF18818 Metallopeptidase superfamily domain WT60_13345 PF13007 Transposase C of IS166 homeodomain WT60_13345 PF13817 IS66 C-terminal element WT60_13345 PF13005 zinc-finger binding domain of transposase IS66 WT60_13345 PF03050 Transposase IS66 family WT60_13350 PF05717 IS66 Orf2 like protein WT60_13360 PF00239 Resolvase, N terminal domain WT60_13360 PF02796 Helix-turn-helix domain of resolvase WT60_13385 PF00768 D-alanyl-D-alanine carboxypeptidase WT60_13390 PF03974 Ecotin WT60_13415 PF01161 Phosphatidylethanolamine-binding protein WT60_13420 PF07690 Major Facilitator Superfamily WT60_13435 PF00982 Glycosyltransferase family 20 WT60_13455 PF00005 ABC transporter WT60_13460 PF00528 Binding-protein-dependent transport system inner membrane component WT60_13470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_13470 PF00512 His Kinase A (phospho-acceptor) domain WT60_13470 PF00672 HAMP domain WT60_13475 PF00072 Response regulator receiver domain WT60_13475 PF00486 Transcriptional regulatory protein, C terminal WT60_13485 PF02678 Pirin WT60_13485 PF17954 Quercetinase C-terminal cupin domain WT60_13490 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_13495 PF00528 Binding-protein-dependent transport system inner membrane component WT60_13500 PF00528 Binding-protein-dependent transport system inner membrane component WT60_13505 PF00005 ABC transporter WT60_13515 PF13609 Gram-negative porin WT60_13520 PF00543 Nitrogen regulatory protein P-II WT60_13525 PF02540 NAD synthase WT60_13525 PF00795 Carbon-nitrogen hydrolase WT60_13535 PF07690 Major Facilitator Superfamily WT60_13540 PF01541 GIY-YIG catalytic domain WT60_13545 PF00719 Inorganic pyrophosphatase WT60_13550 PF00171 Aldehyde dehydrogenase family WT60_13560 PF07690 Major Facilitator Superfamily WT60_13570 PF02602 Uroporphyrinogen-III synthase HemD WT60_13575 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WT60_13575 PF03900 Porphobilinogen deaminase, C-terminal domain WT60_13580 PF00311 Phosphoenolpyruvate carboxylase WT60_13585 PF08241 Methyltransferase domain WT60_13620 PF14698 Argininosuccinate lyase C-terminal WT60_13620 PF00206 Lyase WT60_13630 PF13419 Haloacid dehalogenase-like hydrolase WT60_13640 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain WT60_13640 PF01276 Orn/Lys/Arg decarboxylase, major domain WT60_13640 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain WT60_13645 PF00692 dUTPase WT60_13655 PF10609 NUBPL iron-transfer P-loop NTPase WT60_13660 PF00691 OmpA family WT60_13660 PF05736 OprF membrane domain WT60_13665 PF09334 tRNA synthetases class I (M) WT60_13665 PF01588 Putative tRNA binding domain WT60_13675 PF04357 TamB, inner membrane protein subunit of TAM complex WT60_13680 PF01103 Surface antigen WT60_13680 PF07244 Surface antigen variable number repeat WT60_13680 PF17243 POTRA domain TamA domain 1 WT60_13690 PF02616 Segregation and condensation protein ScpA WT60_13700 PF02569 Pantoate-beta-alanine ligase WT60_13705 PF02261 Aspartate decarboxylase WT60_13715 PF07681 DoxX WT60_13720 PF07685 CobB/CobQ-like glutamine amidotransferase domain WT60_13720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WT60_13725 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase WT60_13730 PF17113 Regulatory signalling modulator protein AmpE WT60_13730 PF03186 CobD/Cbib protein WT60_13735 PF00155 Aminotransferase class I and II WT60_13740 PF01497 Periplasmic binding protein WT60_13750 PF02654 Cobalamin-5-phosphate synthase WT60_13755 PF02277 Phosphoribosyltransferase WT60_13760 PF00005 ABC transporter WT60_13765 PF01032 FecCD transport family WT60_13770 PF00593 TonB dependent receptor WT60_13770 PF07715 TonB-dependent Receptor Plug Domain WT60_13780 PF05164 Cell division protein ZapA WT60_13795 PF01790 Prolipoprotein diacylglyceryl transferase WT60_13800 PF03466 LysR substrate binding domain WT60_13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_13805 PF00920 Dehydratase family WT60_13810 PF00034 Cytochrome c WT60_13820 PF04364 DNA polymerase III chi subunit, HolC WT60_13825 PF00883 Cytosol aminopeptidase family, catalytic domain WT60_13825 PF02789 Cytosol aminopeptidase family, N-terminal domain WT60_13830 PF03739 Lipopolysaccharide export system permease LptF/LptG WT60_13850 PF10414 Sirohaem synthase dimerisation region WT60_13850 PF14824 Sirohaem biosynthesis protein central WT60_13850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WT60_13855 PF00009 Elongation factor Tu GTP binding domain WT60_13860 PF01507 Phosphoadenosine phosphosulfate reductase family WT60_13865 PF01507 Phosphoadenosine phosphosulfate reductase family WT60_13880 PF03466 LysR substrate binding domain WT60_13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_13895 PF00589 Phage integrase family WT60_13895 PF13356 Arm DNA-binding domain WT60_13900 PF08401 Domain of unknown function (DUF1738) WT60_13900 PF13362 Toprim domain WT60_13900 PF18818 Metallopeptidase superfamily domain WT60_13930 PF00239 Resolvase, N terminal domain WT60_13930 PF02796 Helix-turn-helix domain of resolvase WT60_13940 PF00561 alpha/beta hydrolase fold WT60_13945 PF03466 LysR substrate binding domain WT60_13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_13950 PF03466 LysR substrate binding domain WT60_13960 PF01479 S4 domain WT60_13960 PF00849 RNA pseudouridylate synthase WT60_13975 PF00970 Oxidoreductase FAD-binding domain WT60_13975 PF00175 Oxidoreductase NAD-binding domain WT60_13975 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_13980 PF00202 Aminotransferase class-III WT60_13985 PF00583 Acetyltransferase (GNAT) family WT60_13995 PF00005 ABC transporter WT60_14000 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_14000 PF00005 ABC transporter WT60_14005 PF02653 Branched-chain amino acid transport system / permease component WT60_14005 PF11862 Domain of unknown function (DUF3382) WT60_14010 PF02653 Branched-chain amino acid transport system / permease component WT60_14020 PF02401 LytB protein WT60_14025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WT60_14030 PF04002 RadC-like JAB domain WT60_14035 PF00830 Ribosomal L28 family WT60_14040 PF00471 Ribosomal protein L33 WT60_14045 PF00890 FAD binding domain WT60_14045 PF02910 Fumarate reductase flavoprotein C-term WT60_14050 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WT60_14050 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WT60_14055 PF02445 Quinolinate synthetase A protein WT60_14065 PF12795 Mechanosensitive ion channel porin domain WT60_14065 PF00924 Mechanosensitive ion channel WT60_14065 PF12794 Mechanosensitive ion channel inner membrane domain 1 WT60_14070 PF01189 16S rRNA methyltransferase RsmB/F WT60_14070 PF01029 NusB family WT60_14075 PF00551 Formyl transferase WT60_14080 PF01687 Riboflavin kinase WT60_14080 PF06574 FAD synthetase WT60_14085 PF06827 Zinc finger found in FPG and IleRS WT60_14085 PF00133 tRNA synthetases class I (I, L, M and V) WT60_14085 PF08264 Anticodon-binding domain of tRNA WT60_14090 PF01252 Signal peptidase (SPase) II WT60_14095 PF04127 DNA / pantothenate metabolism flavoprotein WT60_14095 PF02441 Flavoprotein WT60_14100 PF00692 dUTPase WT60_14115 PF00324 Amino acid permease WT60_14120 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_14120 PF02861 Clp amino terminal domain, pathogenicity island component WT60_14120 PF17871 AAA lid domain WT60_14120 PF00004 ATPase family associated with various cellular activities (AAA) WT60_14120 PF07724 AAA domain (Cdc48 subfamily) WT60_14125 PF02617 ATP-dependent Clp protease adaptor protein ClpS WT60_14130 PF00313 'Cold-shock' DNA-binding domain WT60_14135 PF07731 Multicopper oxidase WT60_14135 PF07732 Multicopper oxidase WT60_14140 PF00180 Isocitrate/isopropylmalate dehydrogenase WT60_14145 PF00849 RNA pseudouridylate synthase WT60_14155 PF14492 Elongation Factor G, domain II WT60_14155 PF00679 Elongation factor G C-terminus WT60_14155 PF03144 Elongation factor Tu domain 2 WT60_14155 PF00009 Elongation factor Tu GTP binding domain WT60_14155 PF03764 Elongation factor G, domain IV WT60_14170 PF00248 Aldo/keto reductase family WT60_14175 PF07702 UTRA domain WT60_14175 PF00392 Bacterial regulatory proteins, gntR family WT60_14190 PF07690 Major Facilitator Superfamily WT60_14235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WT60_14235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WT60_14245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WT60_14250 PF03966 Trm112p-like protein WT60_14255 PF02348 Cytidylyltransferase WT60_14260 PF05191 Adenylate kinase, active site lid WT60_14265 PF00106 short chain dehydrogenase WT60_14270 PF13369 Transglutaminase-like superfamily WT60_14275 PF03023 Lipid II flippase MurJ WT60_14280 PF01649 Ribosomal protein S20 WT60_14290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WT60_14290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WT60_14295 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WT60_14295 PF01565 FAD binding domain WT60_14300 PF04461 Protein of unknown function (DUF520) WT60_14310 PF02660 Glycerol-3-phosphate acyltransferase WT60_14315 PF04073 Aminoacyl-tRNA editing domain WT60_14320 PF13193 AMP-binding enzyme C-terminal domain WT60_14320 PF00501 AMP-binding enzyme WT60_14325 PF02899 Phage integrase, N-terminal SAM-like domain WT60_14325 PF00589 Phage integrase family WT60_14335 PF08331 Domain of unknown function (DUF1730) WT60_14340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WT60_14345 PF11741 AMIN domain WT60_14345 PF01520 N-acetylmuramoyl-L-alanine amidase WT60_14355 PF00892 EamA-like transporter family WT60_14360 PF05726 Pirin C-terminal cupin domain WT60_14360 PF02678 Pirin WT60_14365 PF00085 Thioredoxin WT60_14370 PF00899 ThiF family WT60_14375 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WT60_14375 PF01243 Pyridoxamine 5'-phosphate oxidase WT60_14390 PF01625 Peptide methionine sulfoxide reductase WT60_14395 PF01613 Flavin reductase like domain WT60_14400 PF01037 Lrp/AsnC ligand binding domain WT60_14405 PF04199 Putative cyclase WT60_14410 PF00266 Aminotransferase class-V WT60_14415 PF03301 Tryptophan 2,3-dioxygenase WT60_14420 PF07690 Major Facilitator Superfamily WT60_14430 PF08546 Ketopantoate reductase PanE/ApbA C terminal WT60_14430 PF02558 Ketopantoate reductase PanE/ApbA WT60_14435 PF00171 Aldehyde dehydrogenase family WT60_14440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_14440 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_14440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_14445 PF03466 LysR substrate binding domain WT60_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_14450 PF08125 Mannitol dehydrogenase C-terminal domain WT60_14450 PF01232 Mannitol dehydrogenase Rossmann domain WT60_14455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WT60_14455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WT60_14460 PF04198 Putative sugar-binding domain WT60_14470 PF00144 Beta-lactamase WT60_14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_14475 PF03466 LysR substrate binding domain WT60_14485 PF00005 ABC transporter WT60_14485 PF08402 TOBE domain WT60_14490 PF13419 Haloacid dehalogenase-like hydrolase WT60_14495 PF00528 Binding-protein-dependent transport system inner membrane component WT60_14500 PF00528 Binding-protein-dependent transport system inner membrane component WT60_14510 PF08013 Tagatose 6 phosphate kinase WT60_14515 PF00294 pfkB family carbohydrate kinase WT60_14525 PF01475 Ferric uptake regulator family WT60_14535 PF00005 ABC transporter WT60_14540 PF00950 ABC 3 transport family WT60_14545 PF00756 Putative esterase WT60_14550 PF08240 Alcohol dehydrogenase GroES-like domain WT60_14550 PF00107 Zinc-binding dehydrogenase WT60_14555 PF01965 DJ-1/PfpI family WT60_14560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WT60_14560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WT60_14565 PF00860 Permease family WT60_14580 PF00873 AcrB/AcrD/AcrF family WT60_14585 PF00529 HlyD membrane-fusion protein of T1SS WT60_14585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_14590 PF00440 Bacterial regulatory proteins, tetR family WT60_14590 PF08361 MAATS-type transcriptional repressor, C-terminal region WT60_14610 PF13180 PDZ domain WT60_14615 PF00512 His Kinase A (phospho-acceptor) domain WT60_14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_14620 PF00486 Transcriptional regulatory protein, C terminal WT60_14620 PF00072 Response regulator receiver domain WT60_14625 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family WT60_14630 PF04116 Fatty acid hydroxylase superfamily WT60_14640 PF03481 Putative GTP-binding controlling metal-binding WT60_14640 PF01300 Telomere recombination WT60_14645 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WT60_14645 PF02222 ATP-grasp domain WT60_14650 PF00731 AIR carboxylase WT60_14655 PF01259 SAICAR synthetase WT60_14660 PF01116 Fructose-bisphosphate aldolase class-II WT60_14665 PF02887 Pyruvate kinase, alpha/beta domain WT60_14665 PF00224 Pyruvate kinase, barrel domain WT60_14670 PF00162 Phosphoglycerate kinase WT60_14685 PF01063 Amino-transferase class IV WT60_14695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WT60_14705 PF00561 alpha/beta hydrolase fold WT60_14720 PF01435 Peptidase family M48 WT60_14720 PF13181 Tetratricopeptide repeat WT60_14725 PF01967 MoaC family WT60_14745 PF04932 O-Antigen ligase WT60_14745 PF11846 Virulence factor membrane-bound polymerase, C-terminal WT60_14745 PF15864 Protein glycosylation ligase WT60_14750 PF07963 Prokaryotic N-terminal methylation motif WT60_14750 PF00114 Pilin (bacterial filament) WT60_14755 PF03741 Integral membrane protein TerC family WT60_14760 PF02629 CoA binding domain WT60_14760 PF00549 CoA-ligase WT60_14765 PF00549 CoA-ligase WT60_14765 PF08442 ATP-grasp domain WT60_14775 PF02631 RecX family WT60_14780 PF00154 recA bacterial DNA recombination protein WT60_14785 PF00486 Transcriptional regulatory protein, C terminal WT60_14785 PF00072 Response regulator receiver domain WT60_14790 PF08521 Two-component sensor kinase N-terminal WT60_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_14790 PF00512 His Kinase A (phospho-acceptor) domain WT60_14795 PF08946 Osmosensory transporter coiled coil WT60_14795 PF00083 Sugar (and other) transporter WT60_14810 PF05717 IS66 Orf2 like protein WT60_14815 PF13005 zinc-finger binding domain of transposase IS66 WT60_14815 PF03050 Transposase IS66 family WT60_14815 PF13817 IS66 C-terminal element WT60_14815 PF13007 Transposase C of IS166 homeodomain WT60_14830 PF03466 LysR substrate binding domain WT60_14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_14835 PF08240 Alcohol dehydrogenase GroES-like domain WT60_14835 PF00107 Zinc-binding dehydrogenase WT60_14840 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_14840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_14845 PF01474 Class-II DAHP synthetase family WT60_14860 PF02153 Prephenate dehydrogenase WT60_14865 PF12802 MarR family WT60_14870 PF01039 Carboxyl transferase domain WT60_14880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WT60_14880 PF02785 Biotin carboxylase C-terminal domain WT60_14880 PF00289 Biotin carboxylase, N-terminal domain WT60_14905 PF01494 FAD binding domain WT60_14910 PF07690 Major Facilitator Superfamily WT60_14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_14940 PF00512 His Kinase A (phospho-acceptor) domain WT60_14940 PF09308 LuxQ, periplasmic WT60_14940 PF00072 Response regulator receiver domain WT60_14945 PF03466 LysR substrate binding domain WT60_14945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_14950 PF01804 Penicillin amidase WT60_14975 PF05139 Erythromycin esterase WT60_14975 PF00156 Phosphoribosyl transferase domain WT60_14980 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WT60_14980 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WT60_14985 PF01738 Dienelactone hydrolase family WT60_14985 PF00156 Phosphoribosyl transferase domain WT60_14990 PF05139 Erythromycin esterase WT60_14990 PF00156 Phosphoribosyl transferase domain WT60_15005 PF00581 Rhodanese-like domain WT60_15020 PF02887 Pyruvate kinase, alpha/beta domain WT60_15020 PF00224 Pyruvate kinase, barrel domain WT60_15020 PF00391 PEP-utilising enzyme, mobile domain WT60_15030 PF03547 Membrane transport protein WT60_15035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_15035 PF08447 PAS fold WT60_15045 PF00072 Response regulator receiver domain WT60_15050 PF00563 EAL domain WT60_15050 PF03707 Bacterial signalling protein N terminal repeat WT60_15050 PF00990 Diguanylate cyclase, GGDEF domain WT60_15055 PF16656 Purple acid Phosphatase, N-terminal domain WT60_15055 PF00149 Calcineurin-like phosphoesterase WT60_15070 PF13378 Enolase C-terminal domain-like WT60_15070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WT60_15075 PF05425 Copper resistance protein D WT60_15085 PF00034 Cytochrome c WT60_15085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WT60_15090 PF00271 Helicase conserved C-terminal domain WT60_15090 PF00270 DEAD/DEAH box helicase WT60_15110 PF08220 DeoR-like helix-turn-helix domain WT60_15110 PF00455 DeoR C terminal sensor domain WT60_15125 PF16901 C-terminal domain of alpha-glycerophosphate oxidase WT60_15125 PF01266 FAD dependent oxidoreductase WT60_15130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WT60_15130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WT60_15135 PF00230 Major intrinsic protein WT60_15145 PF13419 Haloacid dehalogenase-like hydrolase WT60_15150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WT60_15160 PF07690 Major Facilitator Superfamily WT60_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_15165 PF03466 LysR substrate binding domain WT60_15170 PF01938 TRAM domain WT60_15170 PF04055 Radical SAM superfamily WT60_15170 PF00919 Uncharacterized protein family UPF0004 WT60_15175 PF02562 PhoH-like protein WT60_15180 PF02130 Uncharacterized protein family UPF0054 WT60_15185 PF04752 ChaC-like protein WT60_15190 PF00571 CBS domain WT60_15190 PF03471 Transporter associated domain WT60_15195 PF00795 Carbon-nitrogen hydrolase WT60_15210 PF02092 Glycyl-tRNA synthetase beta subunit WT60_15210 PF05746 DALR anticodon binding domain WT60_15220 PF01553 Acyltransferase WT60_15235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WT60_15250 PF00398 Ribosomal RNA adenine dimethylase WT60_15255 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WT60_15260 PF00639 PPIC-type PPIASE domain WT60_15260 PF09312 SurA N-terminal domain WT60_15265 PF04453 LPS transport system D WT60_15270 PF01636 Phosphotransferase enzyme family WT60_15275 PF00483 Nucleotidyl transferase WT60_15280 PF00664 ABC transporter transmembrane region WT60_15280 PF00005 ABC transporter WT60_15285 PF03061 Thioesterase superfamily WT60_15295 PF02634 FdhD/NarQ family WT60_15300 PF00378 Enoyl-CoA hydratase/isomerase WT60_15305 PF00108 Thiolase, N-terminal domain WT60_15305 PF02803 Thiolase, C-terminal domain WT60_15310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WT60_15310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WT60_15310 PF00378 Enoyl-CoA hydratase/isomerase WT60_15315 PF12806 Acetyl-CoA dehydrogenase C-terminal like WT60_15315 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_15315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_15315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_15325 PF13091 PLD-like domain WT60_15330 PF00293 NUDIX domain WT60_15335 PF00152 tRNA synthetases class II (D, K and N) WT60_15335 PF02938 GAD domain WT60_15335 PF01336 OB-fold nucleic acid binding domain WT60_15355 PF03109 ABC1 family WT60_15370 PF01209 ubiE/COQ5 methyltransferase family WT60_15390 PF00291 Pyridoxal-phosphate dependent enzyme WT60_15390 PF00585 C-terminal regulatory domain of Threonine dehydratase WT60_15395 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term WT60_15395 PF14489 QueF-like protein WT60_15400 PF01042 Endoribonuclease L-PSP WT60_15405 PF07969 Amidohydrolase family WT60_15410 PF01380 SIS domain WT60_15410 PF01418 Helix-turn-helix domain, rpiR family WT60_15430 PF07690 Major Facilitator Superfamily WT60_15440 PF07859 alpha/beta hydrolase fold WT60_15455 PF13439 Glycosyltransferase Family 4 WT60_15455 PF00534 Glycosyl transferases group 1 WT60_15460 PF18412 Outer-membrane lipoprotein Wza C-terminal domain WT60_15460 PF10531 SLBB domain WT60_15460 PF02563 Polysaccharide biosynthesis/export protein WT60_15465 PF02397 Bacterial sugar transferase WT60_15480 PF00550 Phosphopantetheine attachment site WT60_15510 PF00158 Sigma-54 interaction domain WT60_15510 PF00072 Response regulator receiver domain WT60_15510 PF02954 Bacterial regulatory protein, Fis family WT60_15520 PF00534 Glycosyl transferases group 1 WT60_15520 PF13439 Glycosyltransferase Family 4 WT60_15530 PF00483 Nucleotidyl transferase WT60_15530 PF01050 Mannose-6-phosphate isomerase WT60_15545 PF00990 Diguanylate cyclase, GGDEF domain WT60_15545 PF08448 PAS fold WT60_15545 PF00563 EAL domain WT60_15550 PF00596 Class II Aldolase and Adducin N-terminal domain WT60_15570 PF00069 Protein kinase domain WT60_15635 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding WT60_15680 PF00899 ThiF family WT60_15680 PF00581 Rhodanese-like domain WT60_15685 PF02597 ThiS family WT60_15690 PF00436 Single-strand binding protein family WT60_15695 PF07690 Major Facilitator Superfamily WT60_15700 PF17755 UvrA DNA-binding domain WT60_15700 PF17760 UvrA interaction domain WT60_15710 PF00551 Formyl transferase WT60_15720 PF01810 LysE type translocator WT60_15725 PF00156 Phosphoribosyl transferase domain WT60_15730 PF02254 TrkA-N domain WT60_15730 PF02080 TrkA-C domain WT60_15730 PF00999 Sodium/hydrogen exchanger family WT60_15735 PF00571 CBS domain WT60_15735 PF01380 SIS domain WT60_15755 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_15755 PF00005 ABC transporter WT60_15760 PF00309 Sigma-54 factor, Activator interacting domain (AID) WT60_15760 PF04963 Sigma-54 factor, core binding domain WT60_15760 PF04552 Sigma-54, DNA binding domain WT60_15765 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WT60_15770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WT60_15775 PF07475 HPr Serine kinase C-terminal domain WT60_15775 PF02603 HPr Serine kinase N terminus WT60_15780 PF03668 P-loop ATPase protein family WT60_15790 PF14815 NUDIX domain WT60_15790 PF00730 HhH-GPD superfamily base excision DNA repair protein WT60_15790 PF00633 Helix-hairpin-helix motif WT60_15790 PF10576 Iron-sulfur binding domain of endonuclease III WT60_15795 PF06827 Zinc finger found in FPG and IleRS WT60_15795 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WT60_15795 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WT60_15805 PF03550 Outer membrane lipoprotein LolB WT60_15810 PF08544 GHMP kinases C terminal WT60_15810 PF00288 GHMP kinases N terminal domain WT60_15820 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WT60_15820 PF14572 Phosphoribosyl synthetase-associated domain WT60_15825 PF14693 Ribosomal protein TL5, C-terminal domain WT60_15825 PF01386 Ribosomal L25p family WT60_15830 PF01195 Peptidyl-tRNA hydrolase WT60_15835 PF00155 Aminotransferase class I and II WT60_15840 PF00037 4Fe-4S binding domain WT60_15845 PF01467 Cytidylyltransferase-like WT60_15855 PF00448 SRP54-type protein, GTPase domain WT60_15855 PF02881 SRP54-type protein, helical bundle domain WT60_15860 PF14497 Glutathione S-transferase, C-terminal domain WT60_15860 PF02798 Glutathione S-transferase, N-terminal domain WT60_15870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WT60_15870 PF18267 Rubredoxin NAD+ reductase C-terminal domain WT60_15870 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_15870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WT60_15870 PF04324 BFD-like [2Fe-2S] binding domain WT60_15875 PF00355 Rieske [2Fe-2S] domain WT60_15880 PF00384 Molybdopterin oxidoreductase WT60_15880 PF01568 Molydopterin dinucleotide binding domain WT60_15880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_15885 PF02885 Glycosyl transferase family, helical bundle domain WT60_15890 PF08502 LeuA allosteric (dimerisation) domain WT60_15890 PF00682 HMGL-like WT60_15900 PF09411 Lipid A 3-O-deacylase (PagL) WT60_15905 PF04542 Sigma-70 region 2 WT60_15905 PF00140 Sigma-70 factor, region 1.2 WT60_15905 PF04545 Sigma-70, region 4 WT60_15915 PF01654 Cytochrome bd terminal oxidase subunit I WT60_15920 PF02322 Cytochrome bd terminal oxidase subunit II WT60_15925 PF08173 Membrane bound YbgT-like protein WT60_15930 PF03173 Putative carbohydrate binding domain WT60_15930 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain WT60_15930 PF02838 Glycosyl hydrolase family 20, domain 2 WT60_15930 PF00728 Glycosyl hydrolase family 20, catalytic domain WT60_15935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 WT60_15935 PF00367 phosphotransferase system, EIIB WT60_15935 PF02378 Phosphotransferase system, EIIC WT60_15940 PF00391 PEP-utilising enzyme, mobile domain WT60_15940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WT60_15940 PF00381 PTS HPr component phosphorylation site WT60_15940 PF02896 PEP-utilising enzyme, TIM barrel domain WT60_15940 PF05524 PEP-utilising enzyme, N-terminal WT60_15945 PF01380 SIS domain WT60_15950 PF01979 Amidohydrolase family WT60_15955 PF00392 Bacterial regulatory proteins, gntR family WT60_15955 PF07702 UTRA domain WT60_15960 PF03466 LysR substrate binding domain WT60_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_15965 PF00501 AMP-binding enzyme WT60_15995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WT60_15995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WT60_16005 PF13193 AMP-binding enzyme C-terminal domain WT60_16005 PF00501 AMP-binding enzyme WT60_16015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_16015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_16015 PF12806 Acetyl-CoA dehydrogenase C-terminal like WT60_16015 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_16025 PF01209 ubiE/COQ5 methyltransferase family WT60_16035 PF12857 TOBE-like domain WT60_16035 PF00005 ABC transporter WT60_16035 PF17850 CysA C-terminal regulatory domain WT60_16050 PF00202 Aminotransferase class-III WT60_16070 PF07733 Bacterial DNA polymerase III alpha NTPase domain WT60_16070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WT60_16070 PF02811 PHP domain WT60_16070 PF14579 Helix-hairpin-helix motif WT60_16080 PF03846 Cell division inhibitor SulA WT60_16085 PF00005 ABC transporter WT60_16100 PF03180 NLPA lipoprotein WT60_16105 PF00672 HAMP domain WT60_16105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_16105 PF02203 Tar ligand binding domain homologue WT60_16115 PF02630 SCO1/SenC WT60_16120 PF01040 UbiA prenyltransferase family WT60_16125 PF02628 Cytochrome oxidase assembly protein WT60_16145 PF00510 Cytochrome c oxidase subunit III WT60_16155 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WT60_16160 PF00115 Cytochrome C and Quinol oxidase polypeptide I WT60_16165 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WT60_16165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WT60_16175 PF08241 Methyltransferase domain WT60_16180 PF00156 Phosphoribosyl transferase domain WT60_16185 PF00588 SpoU rRNA Methylase family WT60_16190 PF01661 Macro domain WT60_16195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WT60_16195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WT60_16200 PF02556 Preprotein translocase subunit SecB WT60_16205 PF00462 Glutaredoxin WT60_16210 PF00581 Rhodanese-like domain WT60_16215 PF00300 Histidine phosphatase superfamily (branch 1) WT60_16220 PF13180 PDZ domain WT60_16220 PF03572 Peptidase family S41 WT60_16225 PF00899 ThiF family WT60_16230 PF05524 PEP-utilising enzyme, N-terminal WT60_16230 PF00391 PEP-utilising enzyme, mobile domain WT60_16230 PF02896 PEP-utilising enzyme, TIM barrel domain WT60_16235 PF00381 PTS HPr component phosphorylation site WT60_16245 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WT60_16245 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WT60_16255 PF00909 Ammonium Transporter Family WT60_16260 PF00543 Nitrogen regulatory protein P-II WT60_16265 PF04380 Membrane fusogenic activity WT60_16270 PF01078 Magnesium chelatase, subunit ChlI WT60_16270 PF13335 Magnesium chelatase, subunit ChlI C-terminal WT60_16290 PF00578 AhpC/TSA family WT60_16295 PF00072 Response regulator receiver domain WT60_16295 PF00158 Sigma-54 interaction domain WT60_16295 PF02954 Bacterial regulatory protein, Fis family WT60_16300 PF00512 His Kinase A (phospho-acceptor) domain WT60_16300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_16300 PF02743 Cache domain WT60_16305 PF00375 Sodium:dicarboxylate symporter family WT60_16310 PF02515 CoA-transferase family III WT60_16315 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_16315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_16315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_16320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_16320 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_16320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_16325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WT60_16325 PF00378 Enoyl-CoA hydratase/isomerase WT60_16325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WT60_16330 PF03466 LysR substrate binding domain WT60_16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16340 PF03466 LysR substrate binding domain WT60_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16345 PF08659 KR domain WT60_16345 PF16197 Ketoacyl-synthetase C-terminal extension WT60_16345 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_16345 PF00107 Zinc-binding dehydrogenase WT60_16345 PF00550 Phosphopantetheine attachment site WT60_16345 PF14765 Polyketide synthase dehydratase WT60_16345 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_16345 PF00698 Acyl transferase domain WT60_16345 PF08240 Alcohol dehydrogenase GroES-like domain WT60_16350 PF04055 Radical SAM superfamily WT60_16350 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WT60_16355 PF03099 Biotin/lipoate A/B protein ligase family WT60_16365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16365 PF03466 LysR substrate binding domain WT60_16370 PF04359 Protein of unknown function (DUF493) WT60_16375 PF01063 Amino-transferase class IV WT60_16380 PF07943 Penicillin-binding protein 5, C-terminal domain WT60_16380 PF00768 D-alanyl-D-alanine carboxypeptidase WT60_16415 PF00005 ABC transporter WT60_16420 PF02405 Permease MlaE WT60_16425 PF02872 5'-nucleotidase, C-terminal domain WT60_16425 PF00149 Calcineurin-like phosphoesterase WT60_16455 PF03309 Type III pantothenate kinase WT60_16465 PF01467 Cytidylyltransferase-like WT60_16485 PF00378 Enoyl-CoA hydratase/isomerase WT60_16505 PF12091 Protein of unknown function (DUF3567) WT60_16510 PF02607 B12 binding domain WT60_16510 PF02965 Vitamin B12 dependent methionine synthase, activation domain WT60_16510 PF02310 B12 binding domain WT60_16510 PF00809 Pterin binding enzyme WT60_16510 PF02574 Homocysteine S-methyltransferase WT60_16515 PF02965 Vitamin B12 dependent methionine synthase, activation domain WT60_16515 PF02310 B12 binding domain WT60_16515 PF02574 Homocysteine S-methyltransferase WT60_16515 PF00809 Pterin binding enzyme WT60_16515 PF02607 B12 binding domain WT60_16525 PF05746 DALR anticodon binding domain WT60_16525 PF00750 tRNA synthetases class I (R) WT60_16525 PF03485 Arginyl tRNA synthetase N terminal domain WT60_16535 PF13462 Thioredoxin WT60_16540 PF00106 short chain dehydrogenase WT60_16555 PF00108 Thiolase, N-terminal domain WT60_16555 PF02803 Thiolase, C-terminal domain WT60_16560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_16565 PF12848 ABC transporter WT60_16565 PF00005 ABC transporter WT60_16575 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) WT60_16580 PF00484 Carbonic anhydrase WT60_16585 PF02803 Thiolase, C-terminal domain WT60_16585 PF00108 Thiolase, N-terminal domain WT60_16590 PF00106 short chain dehydrogenase WT60_16605 PF00202 Aminotransferase class-III WT60_16610 PF00155 Aminotransferase class I and II WT60_16620 PF06968 Biotin and Thiamin Synthesis associated domain WT60_16620 PF04055 Radical SAM superfamily WT60_16625 PF03932 CutC family WT60_16635 PF00245 Alkaline phosphatase WT60_16645 PF00563 EAL domain WT60_16645 PF05231 MASE1 WT60_16650 PF00999 Sodium/hydrogen exchanger family WT60_16660 PF07885 Ion channel WT60_16660 PF17655 Inward rectifier potassium channel C-terminal domain WT60_16685 PF00535 Glycosyl transferase family 2 WT60_16720 PF00437 Type II/IV secretion system protein WT60_16735 PF13629 Pilus formation protein N terminal region WT60_16735 PF04972 BON domain WT60_16735 PF00263 Bacterial type II and III secretion system protein WT60_16780 PF00857 Isochorismatase family WT60_16790 PF07969 Amidohydrolase family WT60_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16815 PF03466 LysR substrate binding domain WT60_16825 PF00857 Isochorismatase family WT60_16835 PF00857 Isochorismatase family WT60_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16850 PF03466 LysR substrate binding domain WT60_16860 PF07859 alpha/beta hydrolase fold WT60_16865 PF03466 LysR substrate binding domain WT60_16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16870 PF00732 GMC oxidoreductase WT60_16870 PF05199 GMC oxidoreductase WT60_16885 PF00701 Dihydrodipicolinate synthetase family WT60_16890 PF12697 Alpha/beta hydrolase family WT60_16905 PF01037 Lrp/AsnC ligand binding domain WT60_16915 PF05506 Domain of unknown function (DUF756) WT60_16915 PF04185 Phosphoesterase family WT60_16930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_16935 PF00682 HMGL-like WT60_16955 PF13404 AsnC-type helix-turn-helix domain WT60_16955 PF01037 Lrp/AsnC ligand binding domain WT60_16960 PF00561 alpha/beta hydrolase fold WT60_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_16970 PF03466 LysR substrate binding domain WT60_16975 PF13609 Gram-negative porin WT60_16985 PF13593 SBF-like CPA transporter family (DUF4137) WT60_16990 PF02203 Tar ligand binding domain homologue WT60_16990 PF00672 HAMP domain WT60_16990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_16995 PF00356 Bacterial regulatory proteins, lacI family WT60_17005 PF00294 pfkB family carbohydrate kinase WT60_17040 PF01171 PP-loop family WT60_17045 PF12804 MobA-like NTP transferase domain WT60_17045 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_17050 PF01380 SIS domain WT60_17065 PF00873 AcrB/AcrD/AcrF family WT60_17070 PF00529 HlyD membrane-fusion protein of T1SS WT60_17070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_17090 PF04536 TPM domain WT60_17095 PF04011 LemA family WT60_17125 PF00764 Arginosuccinate synthase WT60_17150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WT60_17150 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_17210 PF13609 Gram-negative porin WT60_17225 PF08274 PhnA Zinc-Ribbon WT60_17225 PF03831 PhnA domain WT60_17245 PF03466 LysR substrate binding domain WT60_17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_17250 PF00860 Permease family WT60_17255 PF00669 Bacterial flagellin N-terminal helical region WT60_17265 PF07238 PilZ domain WT60_17265 PF07317 Flagellar regulator YcgR WT60_17270 PF10135 Rod binding protein WT60_17270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WT60_17275 PF02119 Flagellar P-ring protein WT60_17280 PF02107 Flagellar L-ring protein WT60_17285 PF00460 Flagella basal body rod protein WT60_17285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WT60_17290 PF00460 Flagella basal body rod protein WT60_17290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WT60_17295 PF00460 Flagella basal body rod protein WT60_17295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WT60_17295 PF07559 Flagellar basal body protein FlaE WT60_17300 PF03963 Flagellar hook capping protein - N-terminal region WT60_17300 PF13861 FlgD Tudor-like domain WT60_17300 PF13860 FlgD Ig-like domain WT60_17305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WT60_17305 PF00460 Flagella basal body rod protein WT60_17310 PF00460 Flagella basal body rod protein WT60_17315 PF17656 FlgA N-terminal domain WT60_17315 PF13144 Chaperone for flagella basal body P-ring formation WT60_17320 PF04316 Anti-sigma-28 factor, FlgM WT60_17385 PF02954 Bacterial regulatory protein, Fis family WT60_17385 PF00158 Sigma-54 interaction domain WT60_17385 PF01590 GAF domain WT60_17390 PF00486 Transcriptional regulatory protein, C terminal WT60_17390 PF00072 Response regulator receiver domain WT60_17395 PF00672 HAMP domain WT60_17395 PF00512 His Kinase A (phospho-acceptor) domain WT60_17395 PF17149 Periplasmic sensor domain found in signal transduction proteins WT60_17395 PF01627 Hpt domain WT60_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_17395 PF00072 Response regulator receiver domain WT60_17405 PF01743 Poly A polymerase head domain WT60_17405 PF12627 Probable RNA and SrmB- binding site of polymerase A WT60_17405 PF01966 HD domain WT60_17420 PF01464 Transglycosylase SLT domain WT60_17420 PF14718 Soluble lytic murein transglycosylase L domain WT60_17425 PF01812 5-formyltetrahydrofolate cyclo-ligase family WT60_17435 PF02682 Carboxyltransferase domain, subdomain C and D WT60_17440 PF02626 Carboxyltransferase domain, subdomain A and B WT60_17445 PF03746 LamB/YcsF family WT60_17465 PF00005 ABC transporter WT60_17465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_17470 PF00005 ABC transporter WT60_17470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_17475 PF00528 Binding-protein-dependent transport system inner membrane component WT60_17475 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_17480 PF00528 Binding-protein-dependent transport system inner membrane component WT60_17485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_17490 PF07690 Major Facilitator Superfamily WT60_17495 PF01355 High potential iron-sulfur protein WT60_17500 PF01266 FAD dependent oxidoreductase WT60_17505 PF05362 Lon protease (S16) C-terminal proteolytic domain WT60_17505 PF00004 ATPase family associated with various cellular activities (AAA) WT60_17515 PF03372 Endonuclease/Exonuclease/phosphatase family WT60_17520 PF01810 LysE type translocator WT60_17525 PF00175 Oxidoreductase NAD-binding domain WT60_17525 PF00970 Oxidoreductase FAD-binding domain WT60_17530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_17530 PF07730 Histidine kinase WT60_17530 PF05231 MASE1 WT60_17535 PF00072 Response regulator receiver domain WT60_17535 PF00196 Bacterial regulatory proteins, luxR family WT60_17540 PF13520 Amino acid permease WT60_17555 PF01312 FlhB HrpN YscU SpaS Family WT60_17570 PF02561 Flagellar protein FliS WT60_17575 PF02049 Flagellar hook-basal body complex protein FliE WT60_17580 PF01514 Secretory protein of YscJ/FliF family WT60_17580 PF08345 Flagellar M-ring protein C-terminal WT60_17585 PF14842 FliG N-terminal domain WT60_17585 PF14841 FliG middle domain WT60_17585 PF01706 FliG C-terminal domain WT60_17595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WT60_17595 PF18269 T3SS EscN ATPase C-terminal domain WT60_17610 PF05199 GMC oxidoreductase WT60_17610 PF00732 GMC oxidoreductase WT60_17615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_17615 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_17615 PF18158 Adaptive response protein AidB N-terminal domain WT60_17620 PF00171 Aldehyde dehydrogenase family WT60_17630 PF01370 NAD dependent epimerase/dehydratase family WT60_17640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WT60_17640 PF13378 Enolase C-terminal domain-like WT60_17645 PF13378 Enolase C-terminal domain-like WT60_17650 PF07690 Major Facilitator Superfamily WT60_17655 PF00171 Aldehyde dehydrogenase family WT60_17660 PF00701 Dihydrodipicolinate synthetase family WT60_17665 PF03466 LysR substrate binding domain WT60_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_17670 PF01636 Phosphotransferase enzyme family WT60_17680 PF07690 Major Facilitator Superfamily WT60_17695 PF00248 Aldo/keto reductase family WT60_17715 PF02772 S-adenosylmethionine synthetase, central domain WT60_17715 PF00438 S-adenosylmethionine synthetase, N-terminal domain WT60_17715 PF02773 S-adenosylmethionine synthetase, C-terminal domain WT60_17720 PF03279 Bacterial lipid A biosynthesis acyltransferase WT60_17725 PF01678 Diaminopimelate epimerase WT60_17735 PF02899 Phage integrase, N-terminal SAM-like domain WT60_17735 PF00589 Phage integrase family WT60_17740 PF10672 S-adenosylmethionine-dependent methyltransferase WT60_17740 PF17785 PUA-like domain WT60_17745 PF02492 CobW/HypB/UreG, nucleotide-binding domain WT60_17745 PF07683 Cobalamin synthesis protein cobW C-terminal domain WT60_17750 PF01258 Prokaryotic dksA/traR C4-type zinc finger WT60_17755 PF00227 Proteasome subunit WT60_17760 PF00004 ATPase family associated with various cellular activities (AAA) WT60_17760 PF07724 AAA domain (Cdc48 subfamily) WT60_17765 PF02954 Bacterial regulatory protein, Fis family WT60_17765 PF00072 Response regulator receiver domain WT60_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_17770 PF00512 His Kinase A (phospho-acceptor) domain WT60_17780 PF00696 Amino acid kinase family WT60_17790 PF00440 Bacterial regulatory proteins, tetR family WT60_17795 PF00561 alpha/beta hydrolase fold WT60_17805 PF07690 Major Facilitator Superfamily WT60_17815 PF06719 AraC-type transcriptional regulator N-terminus WT60_17815 PF12833 Helix-turn-helix domain WT60_17820 PF00107 Zinc-binding dehydrogenase WT60_17820 PF08240 Alcohol dehydrogenase GroES-like domain WT60_17825 PF03372 Endonuclease/Exonuclease/phosphatase family WT60_17830 PF03976 Polyphosphate kinase 2 (PPK2) WT60_17835 PF02637 GatB domain WT60_17835 PF02934 GatB/GatE catalytic domain WT60_17840 PF01425 Amidase WT60_17845 PF02686 Glu-tRNAGln amidotransferase C subunit WT60_17865 PF03717 Penicillin-binding Protein dimerisation domain WT60_17865 PF00905 Penicillin binding protein transpeptidase domain WT60_17870 PF01098 Cell cycle protein WT60_17880 PF03328 HpcH/HpaI aldolase/citrate lyase family WT60_17885 PF01242 6-pyruvoyl tetrahydropterin synthase WT60_17895 PF06508 Queuosine biosynthesis protein QueC WT60_17905 PF02954 Bacterial regulatory protein, Fis family WT60_17905 PF00072 Response regulator receiver domain WT60_17905 PF00158 Sigma-54 interaction domain WT60_17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_17910 PF00989 PAS fold WT60_17910 PF00512 His Kinase A (phospho-acceptor) domain WT60_17910 PF00672 HAMP domain WT60_17920 PF01189 16S rRNA methyltransferase RsmB/F WT60_17920 PF01029 NusB family WT60_17925 PF01435 Peptidase family M48 WT60_17930 PF01810 LysE type translocator WT60_17935 PF02911 Formyl transferase, C-terminal domain WT60_17935 PF00551 Formyl transferase WT60_17940 PF01327 Polypeptide deformylase WT60_17945 PF02481 DNA recombination-mediator protein A WT60_17945 PF17782 DprA winged helix domain WT60_17955 PF01131 DNA topoisomerase WT60_17955 PF01751 Toprim domain WT60_17960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_17960 PF03466 LysR substrate binding domain WT60_17965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_17965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_17985 PF00795 Carbon-nitrogen hydrolase WT60_17990 PF00850 Histone deacetylase domain WT60_17995 PF13416 Bacterial extracellular solute-binding protein WT60_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_18000 PF03466 LysR substrate binding domain WT60_18010 PF00140 Sigma-70 factor, region 1.2 WT60_18010 PF04542 Sigma-70 region 2 WT60_18010 PF04546 Sigma-70, non-essential region WT60_18010 PF03979 Sigma-70 factor, region 1.1 WT60_18010 PF04545 Sigma-70, region 4 WT60_18010 PF04539 Sigma-70 region 3 WT60_18015 PF02540 NAD synthase WT60_18015 PF00795 Carbon-nitrogen hydrolase WT60_18020 PF04262 Glutamate-cysteine ligase WT60_18025 PF00730 HhH-GPD superfamily base excision DNA repair protein WT60_18025 PF06029 AlkA N-terminal domain WT60_18025 PF12833 Helix-turn-helix domain WT60_18025 PF02805 Metal binding domain of Ada WT60_18030 PF12833 Helix-turn-helix domain WT60_18030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WT60_18030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WT60_18030 PF02805 Metal binding domain of Ada WT60_18040 PF07152 YaeQ protein WT60_18050 PF13302 Acetyltransferase (GNAT) domain WT60_18075 PF02796 Helix-turn-helix domain of resolvase WT60_18075 PF00239 Resolvase, N terminal domain WT60_18080 PF00589 Phage integrase family WT60_18080 PF13356 Arm DNA-binding domain WT60_18085 PF10396 GTP-binding protein TrmE N-terminus WT60_18085 PF12631 MnmE helical domain WT60_18085 PF01926 50S ribosome-binding GTPase WT60_18095 PF02096 60Kd inner membrane protein WT60_18095 PF14849 YidC periplasmic domain WT60_18100 PF00825 Ribonuclease P WT60_18105 PF00468 Ribosomal protein L34 WT60_18140 PF00155 Aminotransferase class I and II WT60_18145 PF00107 Zinc-binding dehydrogenase WT60_18145 PF08240 Alcohol dehydrogenase GroES-like domain WT60_18150 PF03814 Potassium-transporting ATPase A subunit WT60_18170 PF00440 Bacterial regulatory proteins, tetR family WT60_18185 PF00171 Aldehyde dehydrogenase family WT60_18190 PF00180 Isocitrate/isopropylmalate dehydrogenase WT60_18195 PF03466 LysR substrate binding domain WT60_18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_18205 PF00043 Glutathione S-transferase, C-terminal domain WT60_18205 PF13417 Glutathione S-transferase, N-terminal domain WT60_18210 PF02567 Phenazine biosynthesis-like protein WT60_18215 PF01037 Lrp/AsnC ligand binding domain WT60_18220 PF00202 Aminotransferase class-III WT60_18225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_18250 PF06314 Acetoacetate decarboxylase (ADC) WT60_18255 PF01569 PAP2 superfamily WT60_18270 PF08021 Siderophore-interacting FAD-binding domain WT60_18270 PF04954 Siderophore-interacting protein WT60_18300 PF02753 Pili assembly chaperone PapD, C-terminal domain WT60_18300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WT60_18305 PF13954 PapC N-terminal domain WT60_18305 PF00577 Outer membrane usher protein WT60_18305 PF13953 PapC C-terminal domain WT60_18320 PF01389 OmpA-like transmembrane domain WT60_18320 PF00691 OmpA family WT60_18325 PF13018 Extended Signal Peptide of Type V secretion system WT60_18325 PF05658 Head domain of trimeric autotransporter adhesin WT60_18325 PF05662 Coiled stalk of trimeric autotransporter adhesin WT60_18325 PF03895 YadA-like membrane anchor domain WT60_18335 PF00196 Bacterial regulatory proteins, luxR family WT60_18335 PF00072 Response regulator receiver domain WT60_18340 PF09456 RcsC Alpha-Beta-Loop (ABL) WT60_18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_18340 PF00072 Response regulator receiver domain WT60_18340 PF00512 His Kinase A (phospho-acceptor) domain WT60_18360 PF00072 Response regulator receiver domain WT60_18360 PF00196 Bacterial regulatory proteins, luxR family WT60_18365 PF00989 PAS fold WT60_18365 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_18365 PF01627 Hpt domain WT60_18365 PF00512 His Kinase A (phospho-acceptor) domain WT60_18365 PF00072 Response regulator receiver domain WT60_18375 PF00196 Bacterial regulatory proteins, luxR family WT60_18375 PF00072 Response regulator receiver domain WT60_18380 PF02321 Outer membrane efflux protein WT60_18385 PF00529 HlyD membrane-fusion protein of T1SS WT60_18390 PF03412 Peptidase C39 family WT60_18390 PF00005 ABC transporter WT60_18390 PF00664 ABC transporter transmembrane region WT60_18405 PF16970 Type-1 fimbrial protein, A WT60_18410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WT60_18410 PF02753 Pili assembly chaperone PapD, C-terminal domain WT60_18415 PF13954 PapC N-terminal domain WT60_18415 PF00577 Outer membrane usher protein WT60_18415 PF13953 PapC C-terminal domain WT60_18425 PF12146 Serine aminopeptidase, S33 WT60_18450 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WT60_18450 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WT60_18465 PF00378 Enoyl-CoA hydratase/isomerase WT60_18475 PF00083 Sugar (and other) transporter WT60_18480 PF04909 Amidohydrolase WT60_18495 PF01070 FMN-dependent dehydrogenase WT60_18510 PF01810 LysE type translocator WT60_18515 PF03466 LysR substrate binding domain WT60_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_18520 PF00027 Cyclic nucleotide-binding domain WT60_18520 PF13545 Crp-like helix-turn-helix domain WT60_18525 PF00582 Universal stress protein family WT60_18540 PF00171 Aldehyde dehydrogenase family WT60_18560 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_18570 PF01227 GTP cyclohydrolase I WT60_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_18575 PF03466 LysR substrate binding domain WT60_18580 PF01494 FAD binding domain WT60_18585 PF01144 Coenzyme A transferase WT60_18590 PF01144 Coenzyme A transferase WT60_18595 PF00206 Lyase WT60_18595 PF10397 Adenylosuccinate lyase C-terminus WT60_18600 PF12146 Serine aminopeptidase, S33 WT60_18605 PF02627 Carboxymuconolactone decarboxylase family WT60_18610 PF07690 Major Facilitator Superfamily WT60_18625 PF12324 Helix-turn-helix domain of alkylmercury lyase WT60_18625 PF03243 Alkylmercury lyase WT60_18635 PF09278 MerR, DNA binding WT60_18635 PF00376 MerR family regulatory protein WT60_18640 PF01894 Uncharacterised protein family UPF0047 WT60_18660 PF00115 Cytochrome C and Quinol oxidase polypeptide I WT60_18670 PF03895 YadA-like membrane anchor domain WT60_18670 PF05658 Head domain of trimeric autotransporter adhesin WT60_18670 PF13018 Extended Signal Peptide of Type V secretion system WT60_18670 PF05662 Coiled stalk of trimeric autotransporter adhesin WT60_18685 PF00419 Fimbrial protein WT60_18690 PF02753 Pili assembly chaperone PapD, C-terminal domain WT60_18690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WT60_18695 PF13953 PapC C-terminal domain WT60_18695 PF13954 PapC N-terminal domain WT60_18695 PF00577 Outer membrane usher protein WT60_18700 PF16970 Type-1 fimbrial protein, A WT60_18710 PF00691 OmpA family WT60_18725 PF05638 Type VI secretion system effector, Hcp WT60_18740 PF00691 OmpA family WT60_18740 PF04972 BON domain WT60_18755 PF04717 Type VI secretion system, phage-baseplate injector WT60_18810 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_18810 PF00004 ATPase family associated with various cellular activities (AAA) WT60_18810 PF17871 AAA lid domain WT60_18810 PF07724 AAA domain (Cdc48 subfamily) WT60_18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_18815 PF00072 Response regulator receiver domain WT60_18815 PF09456 RcsC Alpha-Beta-Loop (ABL) WT60_18815 PF00512 His Kinase A (phospho-acceptor) domain WT60_18820 PF00072 Response regulator receiver domain WT60_18820 PF00196 Bacterial regulatory proteins, luxR family WT60_18825 PF13953 PapC C-terminal domain WT60_18825 PF13954 PapC N-terminal domain WT60_18825 PF00577 Outer membrane usher protein WT60_18850 PF00816 H-NS histone family WT60_18855 PF07690 Major Facilitator Superfamily WT60_18860 PF02595 Glycerate kinase family WT60_18865 PF02887 Pyruvate kinase, alpha/beta domain WT60_18865 PF00224 Pyruvate kinase, barrel domain WT60_18870 PF05651 Putative sugar diacid recognition WT60_18870 PF13556 PucR C-terminal helix-turn-helix domain WT60_18870 PF17853 GGDEF-like domain WT60_18875 PF14765 Polyketide synthase dehydratase WT60_18875 PF00668 Condensation domain WT60_18875 PF16197 Ketoacyl-synthetase C-terminal extension WT60_18875 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_18875 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_18875 PF08659 KR domain WT60_18875 PF13193 AMP-binding enzyme C-terminal domain WT60_18875 PF00550 Phosphopantetheine attachment site WT60_18875 PF00501 AMP-binding enzyme WT60_18890 PF00891 O-methyltransferase domain WT60_18900 PF00528 Binding-protein-dependent transport system inner membrane component WT60_18905 PF00005 ABC transporter WT60_18915 PF07969 Amidohydrolase family WT60_18920 PF00005 ABC transporter WT60_18925 PF00005 ABC transporter WT60_18930 PF06007 Phosphonate metabolism protein PhnJ WT60_18935 PF05861 Bacterial phosphonate metabolism protein (PhnI) WT60_18940 PF05845 Bacterial phosphonate metabolism protein (PhnH) WT60_18945 PF06754 Phosphonate metabolism protein PhnG WT60_18950 PF07702 UTRA domain WT60_18950 PF00392 Bacterial regulatory proteins, gntR family WT60_18960 PF06299 Protein of unknown function (DUF1045) WT60_18970 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_18975 PF01590 GAF domain WT60_18975 PF00990 Diguanylate cyclase, GGDEF domain WT60_18975 PF00360 Phytochrome region WT60_18975 PF00563 EAL domain WT60_18980 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_18980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WT60_18985 PF13407 Periplasmic binding protein domain WT60_18990 PF02653 Branched-chain amino acid transport system / permease component WT60_18995 PF00005 ABC transporter WT60_19000 PF00480 ROK family WT60_19000 PF01047 MarR family WT60_19015 PF09137 Glucodextranase, domain N WT60_19015 PF00723 Glycosyl hydrolases family 15 WT60_19020 PF07690 Major Facilitator Superfamily WT60_19025 PF07687 Peptidase dimerisation domain WT60_19025 PF01546 Peptidase family M20/M25/M40 WT60_19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19030 PF03466 LysR substrate binding domain WT60_19055 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_19080 PF17678 Glycosyl hydrolase family 92 N-terminal domain WT60_19080 PF07971 Glycosyl hydrolase family 92 WT60_19095 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal WT60_19095 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal WT60_19100 PF00733 Asparagine synthase WT60_19100 PF13537 Glutamine amidotransferase domain WT60_19105 PF00107 Zinc-binding dehydrogenase WT60_19105 PF08240 Alcohol dehydrogenase GroES-like domain WT60_19115 PF03466 LysR substrate binding domain WT60_19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19135 PF00120 Glutamine synthetase, catalytic domain WT60_19135 PF03951 Glutamine synthetase, beta-Grasp domain WT60_19140 PF00676 Dehydrogenase E1 component WT60_19145 PF02779 Transketolase, pyrimidine binding domain WT60_19145 PF02780 Transketolase, C-terminal domain WT60_19150 PF02817 e3 binding domain WT60_19150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WT60_19150 PF00364 Biotin-requiring enzyme WT60_19165 PF01070 FMN-dependent dehydrogenase WT60_19170 PF03466 LysR substrate binding domain WT60_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19175 PF00083 Sugar (and other) transporter WT60_19175 PF07690 Major Facilitator Superfamily WT60_19190 PF02423 Ornithine cyclodeaminase/mu-crystallin family WT60_19195 PF01037 Lrp/AsnC ligand binding domain WT60_19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19200 PF03466 LysR substrate binding domain WT60_19205 PF00291 Pyridoxal-phosphate dependent enzyme WT60_19210 PF03466 LysR substrate binding domain WT60_19210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19220 PF01494 FAD binding domain WT60_19255 PF13677 Membrane MotB of proton-channel complex MotA/MotB WT60_19255 PF00691 OmpA family WT60_19290 PF05638 Type VI secretion system effector, Hcp WT60_19310 PF07724 AAA domain (Cdc48 subfamily) WT60_19310 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_19310 PF17871 AAA lid domain WT60_19310 PF00004 ATPase family associated with various cellular activities (AAA) WT60_19315 PF04717 Type VI secretion system, phage-baseplate injector WT60_19315 PF16671 Actin cross-linking domain WT60_19340 PF13419 Haloacid dehalogenase-like hydrolase WT60_19365 PF00300 Histidine phosphatase superfamily (branch 1) WT60_19370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WT60_19370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WT60_19370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WT60_19370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WT60_19375 PF00294 pfkB family carbohydrate kinase WT60_19385 PF00106 short chain dehydrogenase WT60_19400 PF13419 Haloacid dehalogenase-like hydrolase WT60_19420 PF00501 AMP-binding enzyme WT60_19450 PF06445 GyrI-like small molecule binding domain WT60_19450 PF12833 Helix-turn-helix domain WT60_19455 PF00857 Isochorismatase family WT60_19465 PF00501 AMP-binding enzyme WT60_19475 PF05853 beta-keto acid cleavage enzyme WT60_19480 PF00289 Biotin carboxylase, N-terminal domain WT60_19480 PF00364 Biotin-requiring enzyme WT60_19480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WT60_19480 PF02785 Biotin carboxylase C-terminal domain WT60_19485 PF00378 Enoyl-CoA hydratase/isomerase WT60_19490 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_19490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_19490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_19495 PF01039 Carboxyl transferase domain WT60_19510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_19510 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_19510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_19515 PF08361 MAATS-type transcriptional repressor, C-terminal region WT60_19515 PF00440 Bacterial regulatory proteins, tetR family WT60_19525 PF01483 Proprotein convertase P-domain WT60_19525 PF02868 Thermolysin metallopeptidase, alpha-helical domain WT60_19525 PF01447 Thermolysin metallopeptidase, catalytic domain WT60_19525 PF07504 Fungalysin/Thermolysin Propeptide Motif WT60_19540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WT60_19540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WT60_19550 PF00282 Pyridoxal-dependent decarboxylase conserved domain WT60_19565 PF03741 Integral membrane protein TerC family WT60_19565 PF03471 Transporter associated domain WT60_19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19570 PF03466 LysR substrate binding domain WT60_19585 PF02350 UDP-N-acetylglucosamine 2-epimerase WT60_19625 PF01380 SIS domain WT60_19650 PF03239 Iron permease FTR1 family WT60_19660 PF00144 Beta-lactamase WT60_19665 PF00905 Penicillin binding protein transpeptidase domain WT60_19675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_19675 PF00512 His Kinase A (phospho-acceptor) domain WT60_19675 PF00672 HAMP domain WT60_19680 PF00486 Transcriptional regulatory protein, C terminal WT60_19680 PF00072 Response regulator receiver domain WT60_19685 PF00082 Subtilase family WT60_19685 PF04151 Bacterial pre-peptidase C-terminal domain WT60_19690 PF02129 X-Pro dipeptidyl-peptidase (S15 family) WT60_19690 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain WT60_19695 PF03167 Uracil DNA glycosylase superfamily WT60_19700 PF00596 Class II Aldolase and Adducin N-terminal domain WT60_19735 PF03265 Deoxyribonuclease II WT60_19745 PF01545 Cation efflux family WT60_19750 PF02583 Metal-sensitive transcriptional repressor WT60_19765 PF02706 Chain length determinant protein WT60_19765 PF13614 AAA domain WT60_19765 PF13807 G-rich domain on putative tyrosine kinase WT60_19795 PF04151 Bacterial pre-peptidase C-terminal domain WT60_19795 PF09286 Pro-kumamolisin, activation domain WT60_19805 PF00990 Diguanylate cyclase, GGDEF domain WT60_19805 PF00072 Response regulator receiver domain WT60_19810 PF01610 Transposase WT60_19810 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_19810 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_19815 PF00561 alpha/beta hydrolase fold WT60_19820 PF00743 Flavin-binding monooxygenase-like WT60_19825 PF00106 short chain dehydrogenase WT60_19840 PF03466 LysR substrate binding domain WT60_19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_19845 PF02798 Glutathione S-transferase, N-terminal domain WT60_19855 PF01773 Na+ dependent nucleoside transporter N-terminus WT60_19855 PF07662 Na+ dependent nucleoside transporter C-terminus WT60_19860 PF01791 DeoC/LacD family aldolase WT60_19875 PF00591 Glycosyl transferase family, a/b domain WT60_19875 PF02885 Glycosyl transferase family, helical bundle domain WT60_19875 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WT60_19880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WT60_19885 PF04972 BON domain WT60_19890 PF00294 pfkB family carbohydrate kinase WT60_19895 PF00871 Acetokinase family WT60_19900 PF01515 Phosphate acetyl/butaryl transferase WT60_19905 PF00561 alpha/beta hydrolase fold WT60_19905 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus WT60_19915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WT60_19930 PF00119 ATP synthase A chain WT60_19935 PF00137 ATP synthase subunit C WT60_19940 PF00430 ATP synthase B/B' CF(0) WT60_19960 PF00107 Zinc-binding dehydrogenase WT60_19960 PF08240 Alcohol dehydrogenase GroES-like domain WT60_19980 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_19995 PF00005 ABC transporter WT60_20000 PF13533 Biotin-lipoyl like WT60_20005 PF02321 Outer membrane efflux protein WT60_20010 PF00440 Bacterial regulatory proteins, tetR family WT60_20015 PF00582 Universal stress protein family WT60_20030 PF00005 ABC transporter WT60_20040 PF02321 Outer membrane efflux protein WT60_20040 PF08139 Prokaryotic membrane lipoprotein lipid attachment site WT60_20065 PF03641 Possible lysine decarboxylase WT60_20095 PF08240 Alcohol dehydrogenase GroES-like domain WT60_20100 PF13545 Crp-like helix-turn-helix domain WT60_20100 PF00027 Cyclic nucleotide-binding domain WT60_20105 PF00106 short chain dehydrogenase WT60_20110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WT60_20110 PF00753 Metallo-beta-lactamase superfamily WT60_20110 PF10996 Beta-Casp domain WT60_20125 PF00324 Amino acid permease WT60_20135 PF00106 short chain dehydrogenase WT60_20140 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_20140 PF00970 Oxidoreductase FAD-binding domain WT60_20140 PF00175 Oxidoreductase NAD-binding domain WT60_20145 PF00866 Ring hydroxylating beta subunit WT60_20150 PF00355 Rieske [2Fe-2S] domain WT60_20150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WT60_20155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_20155 PF03466 LysR substrate binding domain WT60_20185 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term WT60_20185 PF12833 Helix-turn-helix domain WT60_20190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_20190 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_20200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WT60_20200 PF06481 COX Aromatic Rich Motif WT60_20205 PF00115 Cytochrome C and Quinol oxidase polypeptide I WT60_20210 PF00510 Cytochrome c oxidase subunit III WT60_20215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WT60_20220 PF00486 Transcriptional regulatory protein, C terminal WT60_20220 PF00072 Response regulator receiver domain WT60_20225 PF00672 HAMP domain WT60_20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_20225 PF00512 His Kinase A (phospho-acceptor) domain WT60_20230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_20230 PF00529 HlyD membrane-fusion protein of T1SS WT60_20235 PF00873 AcrB/AcrD/AcrF family WT60_20240 PF02321 Outer membrane efflux protein WT60_20240 PF08139 Prokaryotic membrane lipoprotein lipid attachment site WT60_20245 PF02426 Muconolactone delta-isomerase WT60_20250 PF04444 Catechol dioxygenase N terminus WT60_20250 PF00775 Dioxygenase WT60_20255 PF13378 Enolase C-terminal domain-like WT60_20255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WT60_20260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_20260 PF03466 LysR substrate binding domain WT60_20265 PF12833 Helix-turn-helix domain WT60_20265 PF14525 AraC-binding-like domain WT60_20270 PF00355 Rieske [2Fe-2S] domain WT60_20270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WT60_20275 PF00866 Ring hydroxylating beta subunit WT60_20280 PF00355 Rieske [2Fe-2S] domain WT60_20285 PF14759 Reductase C-terminal WT60_20285 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_20290 PF01230 HIT domain WT60_20295 PF13091 PLD-like domain WT60_20305 PF04286 Protein of unknown function (DUF445) WT60_20315 PF00999 Sodium/hydrogen exchanger family WT60_20320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_20320 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_20320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_20325 PF00171 Aldehyde dehydrogenase family WT60_20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_20335 PF00512 His Kinase A (phospho-acceptor) domain WT60_20340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_20340 PF02743 Cache domain WT60_20340 PF00672 HAMP domain WT60_20350 PF01739 CheR methyltransferase, SAM binding domain WT60_20350 PF01739 CheR methyltransferase, SAM binding domain WT60_20360 PF00072 Response regulator receiver domain WT60_20360 PF01627 Hpt domain WT60_20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_20360 PF01584 CheW-like domain WT60_20365 PF01339 CheB methylesterase WT60_20365 PF00072 Response regulator receiver domain WT60_20375 PF00654 Voltage gated chloride channel WT60_20395 PF00579 tRNA synthetases class I (W and Y) WT60_20400 PF01965 DJ-1/PfpI family WT60_20400 PF12833 Helix-turn-helix domain WT60_20405 PF01965 DJ-1/PfpI family WT60_20410 PF00664 ABC transporter transmembrane region WT60_20410 PF00005 ABC transporter WT60_20415 PF04261 Dyp-type peroxidase family WT60_20435 PF03466 LysR substrate binding domain WT60_20435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_20440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_20440 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_20440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_20470 PF00107 Zinc-binding dehydrogenase WT60_20470 PF16884 N-terminal domain of oxidoreductase WT60_20485 PF07690 Major Facilitator Superfamily WT60_20490 PF07715 TonB-dependent Receptor Plug Domain WT60_20490 PF00593 TonB dependent receptor WT60_20500 PF01594 AI-2E family transporter WT60_20525 PF03795 YCII-related domain WT60_20540 PF08281 Sigma-70, region 4 WT60_20540 PF04542 Sigma-70 region 2 WT60_20545 PF01510 N-acetylmuramoyl-L-alanine amidase WT60_20550 PF02915 Rubrerythrin WT60_20555 PF13183 4Fe-4S dicluster domain WT60_20555 PF02754 Cysteine-rich domain WT60_20570 PF00483 Nucleotidyl transferase WT60_20570 PF01050 Mannose-6-phosphate isomerase WT60_20575 PF02397 Bacterial sugar transferase WT60_20580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WT60_20580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WT60_20580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WT60_20585 PF01451 Low molecular weight phosphotyrosine protein phosphatase WT60_20590 PF02563 Polysaccharide biosynthesis/export protein WT60_20590 PF18412 Outer-membrane lipoprotein Wza C-terminal domain WT60_20590 PF10531 SLBB domain WT60_20595 PF13614 AAA domain WT60_20595 PF02706 Chain length determinant protein WT60_20595 PF13807 G-rich domain on putative tyrosine kinase WT60_20615 PF13439 Glycosyltransferase Family 4 WT60_20615 PF00534 Glycosyl transferases group 1 WT60_20620 PF13439 Glycosyltransferase Family 4 WT60_20630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WT60_20645 PF09722 Protein of unknown function (DUF2384) WT60_20655 PF00149 Calcineurin-like phosphoesterase WT60_20680 PF00550 Phosphopantetheine attachment site WT60_20680 PF13193 AMP-binding enzyme C-terminal domain WT60_20680 PF00501 AMP-binding enzyme WT60_20680 PF00668 Condensation domain WT60_20695 PF00975 Thioesterase domain WT60_20700 PF03737 Aldolase/RraA WT60_20705 PF01063 Amino-transferase class IV WT60_20710 PF00975 Thioesterase domain WT60_20715 PF01118 Semialdehyde dehydrogenase, NAD binding domain WT60_20715 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation WT60_20720 PF00682 HMGL-like WT60_20720 PF07836 DmpG-like communication domain WT60_20755 PF01070 FMN-dependent dehydrogenase WT60_20770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WT60_20770 PF02806 Alpha amylase, C-terminal all-beta domain WT60_20770 PF00128 Alpha amylase, catalytic domain WT60_20775 PF17792 ThiD2 family WT60_20775 PF02581 Thiamine monophosphate synthase WT60_20780 PF01595 Cyclin M transmembrane N-terminal domain WT60_20780 PF00571 CBS domain WT60_20780 PF03471 Transporter associated domain WT60_20795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_20795 PF03466 LysR substrate binding domain WT60_20810 PF03459 TOBE domain WT60_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_20815 PF03459 TOBE domain WT60_20815 PF00005 ABC transporter WT60_20820 PF00528 Binding-protein-dependent transport system inner membrane component WT60_20830 PF01569 PAP2 superfamily WT60_20840 PF02566 OsmC-like protein WT60_20845 PF01047 MarR family WT60_20860 PF01636 Phosphotransferase enzyme family WT60_20870 PF01048 Phosphorylase superfamily WT60_20870 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus WT60_20880 PF03641 Possible lysine decarboxylase WT60_20885 PF01367 5'-3' exonuclease, C-terminal SAM fold WT60_20885 PF00476 DNA polymerase family A WT60_20885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WT60_20885 PF01612 3'-5' exonuclease WT60_20890 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_20910 PF01738 Dienelactone hydrolase family WT60_20925 PF02609 Exonuclease VII small subunit WT60_20930 PF00348 Polyprenyl synthetase WT60_20935 PF02780 Transketolase, C-terminal domain WT60_20935 PF02779 Transketolase, pyrimidine binding domain WT60_20935 PF13292 1-deoxy-D-xylulose-5-phosphate synthase WT60_20940 PF02649 Type I GTP cyclohydrolase folE2 WT60_20950 PF00814 Glycoprotease family WT60_20960 PF01165 Ribosomal protein S21 WT60_20970 PF10410 DnaB-helicase binding domain of primase WT60_20970 PF08278 DNA primase DnaG DnaB-binding WT60_20970 PF08275 DNA primase catalytic core, N-terminal domain WT60_20970 PF01807 CHC2 zinc finger WT60_20980 PF04546 Sigma-70, non-essential region WT60_20980 PF04542 Sigma-70 region 2 WT60_20980 PF00140 Sigma-70 factor, region 1.2 WT60_20980 PF03979 Sigma-70 factor, region 1.1 WT60_20980 PF04545 Sigma-70, region 4 WT60_20980 PF04539 Sigma-70 region 3 WT60_21005 PF08765 Mor transcription activator family WT60_21170 PF07484 Phage Tail Collar Domain WT60_21190 PF01757 Acyltransferase family WT60_21195 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin WT60_21200 PF02146 Sir2 family WT60_21210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_21210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain WT60_21225 PF01476 LysM domain WT60_21225 PF01551 Peptidase family M23 WT60_21235 PF01292 Prokaryotic cytochrome b561 WT60_21245 PF07715 TonB-dependent Receptor Plug Domain WT60_21245 PF00593 TonB dependent receptor WT60_21250 PF00561 alpha/beta hydrolase fold WT60_21255 PF03280 Proteobacterial lipase chaperone protein WT60_21260 PF00392 Bacterial regulatory proteins, gntR family WT60_21260 PF00155 Aminotransferase class I and II WT60_21265 PF00005 ABC transporter WT60_21265 PF08402 TOBE domain WT60_21275 PF00528 Binding-protein-dependent transport system inner membrane component WT60_21280 PF00528 Binding-protein-dependent transport system inner membrane component WT60_21285 PF00082 Subtilase family WT60_21285 PF09286 Pro-kumamolisin, activation domain WT60_21300 PF00264 Common central domain of tyrosinase WT60_21325 PF00694 Aconitase C-terminal domain WT60_21325 PF00330 Aconitase family (aconitate hydratase) WT60_21330 PF03972 MmgE/PrpD family WT60_21345 PF00056 lactate/malate dehydrogenase, NAD binding domain WT60_21345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WT60_21350 PF07702 UTRA domain WT60_21350 PF00392 Bacterial regulatory proteins, gntR family WT60_21355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WT60_21365 PF00890 FAD binding domain WT60_21365 PF02910 Fumarate reductase flavoprotein C-term WT60_21370 PF13085 2Fe-2S iron-sulfur cluster binding domain WT60_21375 PF03937 Flavinator of succinate dehydrogenase WT60_21380 PF00285 Citrate synthase, C-terminal domain WT60_21400 PF07350 Protein of unknown function (DUF1479) WT60_21405 PF17831 Pyruvate dehydrogenase E1 component middle domain WT60_21405 PF00456 Transketolase, thiamine diphosphate binding domain WT60_21410 PF01037 Lrp/AsnC ligand binding domain WT60_21415 PF00330 Aconitase family (aconitate hydratase) WT60_21425 PF00694 Aconitase C-terminal domain WT60_21430 PF00180 Isocitrate/isopropylmalate dehydrogenase WT60_21440 PF01118 Semialdehyde dehydrogenase, NAD binding domain WT60_21440 PF02774 Semialdehyde dehydrogenase, dimerisation domain WT60_21450 PF01416 tRNA pseudouridine synthase WT60_21455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WT60_21460 PF00291 Pyridoxal-phosphate dependent enzyme WT60_21465 PF01555 DNA methylase WT60_21470 PF00290 Tryptophan synthase alpha chain WT60_21475 PF17848 Acetyl-coA carboxylase zinc finger domain WT60_21475 PF01039 Carboxyl transferase domain WT60_21480 PF08245 Mur ligase middle domain WT60_21480 PF02875 Mur ligase family, glutamate ligase domain WT60_21495 PF00156 Phosphoribosyl transferase domain WT60_21500 PF01053 Cys/Met metabolism PLP-dependent enzyme WT60_21510 PF01370 NAD dependent epimerase/dehydratase family WT60_21515 PF16363 GDP-mannose 4,6 dehydratase WT60_21520 PF01757 Acyltransferase family WT60_21530 PF14667 Polysaccharide biosynthesis C-terminal domain WT60_21530 PF01943 Polysaccharide biosynthesis protein WT60_21535 PF13439 Glycosyltransferase Family 4 WT60_21535 PF00534 Glycosyl transferases group 1 WT60_21540 PF01757 Acyltransferase family WT60_21545 PF00483 Nucleotidyl transferase WT60_21550 PF01757 Acyltransferase family WT60_21560 PF13609 Gram-negative porin WT60_21565 PF03631 Virulence factor BrkB WT60_21580 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WT60_21595 PF01434 Peptidase family M41 WT60_21595 PF00004 ATPase family associated with various cellular activities (AAA) WT60_21595 PF17862 AAA+ lid domain WT60_21605 PF00158 Sigma-54 interaction domain WT60_21605 PF00072 Response regulator receiver domain WT60_21605 PF02954 Bacterial regulatory protein, Fis family WT60_21615 PF00741 Gas vesicle protein WT60_21625 PF07728 AAA domain (dynein-related subfamily) WT60_21650 PF00741 Gas vesicle protein WT60_21660 PF00741 Gas vesicle protein WT60_21675 PF00296 Luciferase-like monooxygenase WT60_21680 PF00296 Luciferase-like monooxygenase WT60_21690 PF00005 ABC transporter WT60_21715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_21715 PF00384 Molybdopterin oxidoreductase WT60_21715 PF01568 Molydopterin dinucleotide binding domain WT60_21720 PF00384 Molybdopterin oxidoreductase WT60_21720 PF01568 Molydopterin dinucleotide binding domain WT60_21720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_21725 PF13247 4Fe-4S dicluster domain WT60_21725 PF09163 Formate dehydrogenase N, transmembrane WT60_21730 PF01292 Prokaryotic cytochrome b561 WT60_21735 PF04216 Protein involved in formate dehydrogenase formation WT60_21740 PF03841 L-seryl-tRNA selenium transferase WT60_21740 PF12390 Selenocysteine synthase N terminal WT60_21745 PF09107 Elongation factor SelB, winged helix WT60_21745 PF09106 Elongation factor SelB, winged helix WT60_21745 PF03144 Elongation factor Tu domain 2 WT60_21745 PF00009 Elongation factor Tu GTP binding domain WT60_21765 PF00067 Cytochrome P450 WT60_21810 PF03466 LysR substrate binding domain WT60_21810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_21815 PF03328 HpcH/HpaI aldolase/citrate lyase family WT60_21825 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WT60_21825 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain WT60_21840 PF03454 MoeA C-terminal region (domain IV) WT60_21840 PF00994 Probable molybdopterin binding domain WT60_21840 PF03453 MoeA N-terminal region (domain I and II) WT60_21850 PF01311 Bacterial export proteins, family 1 WT60_21860 PF18269 T3SS EscN ATPase C-terminal domain WT60_21860 PF02874 ATP synthase alpha/beta family, beta-barrel domain WT60_21860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WT60_21895 PF01312 FlhB HrpN YscU SpaS Family WT60_21900 PF00771 FHIPEP family WT60_21915 PF00813 FliP family WT60_21920 PF01313 Bacterial export proteins, family 3 WT60_21950 PF12833 Helix-turn-helix domain WT60_21970 PF00486 Transcriptional regulatory protein, C terminal WT60_21970 PF00072 Response regulator receiver domain WT60_21980 PF00437 Type II/IV secretion system protein WT60_21990 PF07655 Secretin N-terminal domain WT60_21990 PF00263 Bacterial type II and III secretion system protein WT60_22005 PF00437 Type II/IV secretion system protein WT60_22055 PF00491 Arginase family WT60_22075 PF07804 HipA-like C-terminal domain WT60_22075 PF13657 HipA N-terminal domain WT60_22090 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WT60_22095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system WT60_22100 PF00005 ABC transporter WT60_22105 PF00528 Binding-protein-dependent transport system inner membrane component WT60_22110 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_22110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_22115 PF00765 Autoinducer synthase WT60_22130 PF00501 AMP-binding enzyme WT60_22130 PF13193 AMP-binding enzyme C-terminal domain WT60_22135 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA WT60_22140 PF01384 Phosphate transporter family WT60_22150 PF01037 Lrp/AsnC ligand binding domain WT60_22155 PF01810 LysE type translocator WT60_22160 PF00082 Subtilase family WT60_22160 PF09286 Pro-kumamolisin, activation domain WT60_22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_22180 PF03466 LysR substrate binding domain WT60_22185 PF02678 Pirin WT60_22185 PF17954 Quercetinase C-terminal cupin domain WT60_22215 PF00857 Isochorismatase family WT60_22230 PF07969 Amidohydrolase family WT60_22235 PF00196 Bacterial regulatory proteins, luxR family WT60_22260 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term WT60_22260 PF14489 QueF-like protein WT60_22280 PF07732 Multicopper oxidase WT60_22290 PF09370 Phosphoenolpyruvate hydrolase-like WT60_22310 PF02540 NAD synthase WT60_22325 PF00107 Zinc-binding dehydrogenase WT60_22325 PF08240 Alcohol dehydrogenase GroES-like domain WT60_22330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WT60_22330 PF13378 Enolase C-terminal domain-like WT60_22340 PF01232 Mannitol dehydrogenase Rossmann domain WT60_22340 PF08125 Mannitol dehydrogenase C-terminal domain WT60_22345 PF07690 Major Facilitator Superfamily WT60_22350 PF08220 DeoR-like helix-turn-helix domain WT60_22350 PF00455 DeoR C terminal sensor domain WT60_22360 PF00440 Bacterial regulatory proteins, tetR family WT60_22365 PF01266 FAD dependent oxidoreductase WT60_22375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_22375 PF03466 LysR substrate binding domain WT60_22385 PF00155 Aminotransferase class I and II WT60_22390 PF00171 Aldehyde dehydrogenase family WT60_22395 PF02424 ApbE family WT60_22400 PF00667 FAD binding domain WT60_22400 PF00258 Flavodoxin WT60_22400 PF00175 Oxidoreductase NAD-binding domain WT60_22420 PF00072 Response regulator receiver domain WT60_22420 PF00486 Transcriptional regulatory protein, C terminal WT60_22425 PF00512 His Kinase A (phospho-acceptor) domain WT60_22425 PF08521 Two-component sensor kinase N-terminal WT60_22425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_22450 PF00083 Sugar (and other) transporter WT60_22480 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_22480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_22480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_22485 PF01039 Carboxyl transferase domain WT60_22495 PF02785 Biotin carboxylase C-terminal domain WT60_22495 PF00289 Biotin carboxylase, N-terminal domain WT60_22495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WT60_22495 PF00364 Biotin-requiring enzyme WT60_22520 PF05662 Coiled stalk of trimeric autotransporter adhesin WT60_22520 PF13018 Extended Signal Peptide of Type V secretion system WT60_22520 PF05658 Head domain of trimeric autotransporter adhesin WT60_22520 PF03895 YadA-like membrane anchor domain WT60_22540 PF05662 Coiled stalk of trimeric autotransporter adhesin WT60_22540 PF03895 YadA-like membrane anchor domain WT60_22540 PF05658 Head domain of trimeric autotransporter adhesin WT60_22575 PF03358 NADPH-dependent FMN reductase WT60_22585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_22585 PF03466 LysR substrate binding domain WT60_22595 PF00571 CBS domain WT60_22595 PF00005 ABC transporter WT60_22600 PF00528 Binding-protein-dependent transport system inner membrane component WT60_22605 PF12833 Helix-turn-helix domain WT60_22605 PF01965 DJ-1/PfpI family WT60_22610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system WT60_22635 PF01548 Transposase WT60_22635 PF02371 Transposase IS116/IS110/IS902 family WT60_22640 PF01370 NAD dependent epimerase/dehydratase family WT60_22645 PF01261 Xylose isomerase-like TIM barrel WT60_22650 PF07690 Major Facilitator Superfamily WT60_22655 PF00596 Class II Aldolase and Adducin N-terminal domain WT60_22660 PF07005 Sugar-binding N-terminal domain WT60_22660 PF17042 Nucleotide-binding C-terminal domain WT60_22665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WT60_22665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_22670 PF00392 Bacterial regulatory proteins, gntR family WT60_22670 PF07729 FCD domain WT60_22685 PF17932 Tetracyclin repressor-like, C-terminal domain WT60_22685 PF00440 Bacterial regulatory proteins, tetR family WT60_22690 PF00106 short chain dehydrogenase WT60_22695 PF00106 short chain dehydrogenase WT60_22720 PF04337 Protein of unknown function, DUF480 WT60_22730 PF01965 DJ-1/PfpI family WT60_22730 PF12833 Helix-turn-helix domain WT60_22735 PF03315 Serine dehydratase beta chain WT60_22735 PF03313 Serine dehydratase alpha chain WT60_22740 PF01266 FAD dependent oxidoreductase WT60_22745 PF04267 Sarcosine oxidase, delta subunit family WT60_22750 PF17806 Sarcosine oxidase A3 domain WT60_22750 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_22750 PF08669 Glycine cleavage T-protein C-terminal barrel domain WT60_22750 PF01571 Aminomethyltransferase folate-binding domain WT60_22785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WT60_22785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WT60_22800 PF00512 His Kinase A (phospho-acceptor) domain WT60_22800 PF08446 PAS fold WT60_22800 PF00360 Phytochrome region WT60_22800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_22800 PF01590 GAF domain WT60_22805 PF00072 Response regulator receiver domain WT60_22810 PF17200 Single Cache domain 2 WT60_22810 PF07730 Histidine kinase WT60_22815 PF07690 Major Facilitator Superfamily WT60_22825 PF05199 GMC oxidoreductase WT60_22825 PF00732 GMC oxidoreductase WT60_22830 PF00171 Aldehyde dehydrogenase family WT60_22835 PF13977 BetI-type transcriptional repressor, C-terminal WT60_22835 PF00440 Bacterial regulatory proteins, tetR family WT60_22840 PF00561 alpha/beta hydrolase fold WT60_22845 PF03033 Glycosyltransferase family 28 N-terminal domain WT60_22850 PF07690 Major Facilitator Superfamily WT60_22855 PF00535 Glycosyl transferase family 2 WT60_22860 PF02321 Outer membrane efflux protein WT60_22865 PF13533 Biotin-lipoyl like WT60_22875 PF00326 Prolyl oligopeptidase family WT60_22875 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WT60_22885 PF00132 Bacterial transferase hexapeptide (six repeats) WT60_22900 PF00266 Aminotransferase class-V WT60_22905 PF01292 Prokaryotic cytochrome b561 WT60_22915 PF04143 Sulphur transport WT60_22945 PF00264 Common central domain of tyrosinase WT60_22950 PF04072 Leucine carboxyl methyltransferase WT60_22955 PF03150 Di-haem cytochrome c peroxidase WT60_22970 PF04909 Amidohydrolase WT60_22980 PF00392 Bacterial regulatory proteins, gntR family WT60_22980 PF07702 UTRA domain WT60_22985 PF07690 Major Facilitator Superfamily WT60_22995 PF12728 Helix-turn-helix domain WT60_22995 PF02661 Fic/DOC family WT60_23000 PF13419 Haloacid dehalogenase-like hydrolase WT60_23015 PF01037 Lrp/AsnC ligand binding domain WT60_23020 PF00291 Pyridoxal-phosphate dependent enzyme WT60_23040 PF00005 ABC transporter WT60_23040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_23045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_23045 PF00005 ABC transporter WT60_23050 PF00528 Binding-protein-dependent transport system inner membrane component WT60_23050 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_23055 PF00528 Binding-protein-dependent transport system inner membrane component WT60_23060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_23065 PF03466 LysR substrate binding domain WT60_23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_23080 PF04185 Phosphoesterase family WT60_23090 PF00144 Beta-lactamase WT60_23095 PF02028 BCCT, betaine/carnitine/choline family transporter WT60_23105 PF01112 Asparaginase WT60_23110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_23110 PF00005 ABC transporter WT60_23115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_23120 PF00528 Binding-protein-dependent transport system inner membrane component WT60_23125 PF00528 Binding-protein-dependent transport system inner membrane component WT60_23125 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_23130 PF03576 Peptidase family S58 WT60_23155 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal WT60_23155 PF00775 Dioxygenase WT60_23160 PF03466 LysR substrate binding domain WT60_23160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_23180 PF00990 Diguanylate cyclase, GGDEF domain WT60_23180 PF01590 GAF domain WT60_23180 PF00563 EAL domain WT60_23180 PF00360 Phytochrome region WT60_23190 PF01596 O-methyltransferase WT60_23200 PF00793 DAHP synthetase I family WT60_23205 PF03795 YCII-related domain WT60_23220 PF00270 DEAD/DEAH box helicase WT60_23220 PF08494 DEAD/H associated WT60_23220 PF00271 Helicase conserved C-terminal domain WT60_23245 PF02321 Outer membrane efflux protein WT60_23255 PF00005 ABC transporter WT60_23255 PF03412 Peptidase C39 family WT60_23255 PF00664 ABC transporter transmembrane region WT60_23275 PF03976 Polyphosphate kinase 2 (PPK2) WT60_23285 PF00585 C-terminal regulatory domain of Threonine dehydratase WT60_23285 PF00291 Pyridoxal-phosphate dependent enzyme WT60_23305 PF01566 Natural resistance-associated macrophage protein WT60_23315 PF01205 Uncharacterized protein family UPF0029 WT60_23315 PF09186 Domain of unknown function (DUF1949) WT60_23350 PF00248 Aldo/keto reductase family WT60_23355 PF07690 Major Facilitator Superfamily WT60_23360 PF12706 Beta-lactamase superfamily domain WT60_23365 PF03466 LysR substrate binding domain WT60_23365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_23380 PF00465 Iron-containing alcohol dehydrogenase WT60_23385 PF16884 N-terminal domain of oxidoreductase WT60_23385 PF00107 Zinc-binding dehydrogenase WT60_23395 PF01799 [2Fe-2S] binding domain WT60_23395 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_23400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WT60_23405 PF00034 Cytochrome c WT60_23405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WT60_23420 PF02515 CoA-transferase family III WT60_23430 PF03466 LysR substrate binding domain WT60_23430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_23445 PF00107 Zinc-binding dehydrogenase WT60_23445 PF08240 Alcohol dehydrogenase GroES-like domain WT60_23455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_23455 PF03466 LysR substrate binding domain WT60_23460 PF07690 Major Facilitator Superfamily WT60_23460 PF00083 Sugar (and other) transporter WT60_23465 PF07687 Peptidase dimerisation domain WT60_23465 PF01546 Peptidase family M20/M25/M40 WT60_23470 PF00850 Histone deacetylase domain WT60_23480 PF00005 ABC transporter WT60_23490 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_23490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WT60_23490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WT60_23490 PF18267 Rubredoxin NAD+ reductase C-terminal domain WT60_23490 PF04324 BFD-like [2Fe-2S] binding domain WT60_23495 PF13806 Rieske-like [2Fe-2S] domain WT60_23500 PF01568 Molydopterin dinucleotide binding domain WT60_23500 PF00384 Molybdopterin oxidoreductase WT60_23500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_23515 PF03717 Penicillin-binding Protein dimerisation domain WT60_23515 PF00905 Penicillin binding protein transpeptidase domain WT60_23520 PF07943 Penicillin-binding protein 5, C-terminal domain WT60_23520 PF00768 D-alanyl-D-alanine carboxypeptidase WT60_23530 PF01464 Transglycosylase SLT domain WT60_23535 PF01312 FlhB HrpN YscU SpaS Family WT60_23540 PF01311 Bacterial export proteins, family 1 WT60_23545 PF01313 Bacterial export proteins, family 3 WT60_23550 PF00813 FliP family WT60_23575 PF00771 FHIPEP family WT60_23585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_23585 PF00672 HAMP domain WT60_23585 PF00512 His Kinase A (phospho-acceptor) domain WT60_23585 PF01627 Hpt domain WT60_23585 PF00072 Response regulator receiver domain WT60_23585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) WT60_23590 PF00196 Bacterial regulatory proteins, luxR family WT60_23590 PF00072 Response regulator receiver domain WT60_23630 PF01514 Secretory protein of YscJ/FliF family WT60_23645 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF WT60_23650 PF12833 Helix-turn-helix domain WT60_23655 PF03433 EspA-like secreted protein WT60_23665 PF03433 EspA-like secreted protein WT60_23675 PF04888 Secretion system effector C (SseC) like family WT60_23690 PF00027 Cyclic nucleotide-binding domain WT60_23690 PF13545 Crp-like helix-turn-helix domain WT60_23695 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WT60_23705 PF07715 TonB-dependent Receptor Plug Domain WT60_23705 PF00593 TonB dependent receptor WT60_23710 PF00528 Binding-protein-dependent transport system inner membrane component WT60_23715 PF00884 Sulfatase WT60_23735 PF02472 Biopolymer transport protein ExbD/TolR WT60_23740 PF00005 ABC transporter WT60_23760 PF07690 Major Facilitator Superfamily WT60_23765 PF00455 DeoR C terminal sensor domain WT60_23765 PF08220 DeoR-like helix-turn-helix domain WT60_23770 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_23770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_23790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_23795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_23795 PF03466 LysR substrate binding domain WT60_23830 PF00999 Sodium/hydrogen exchanger family WT60_23830 PF02254 TrkA-N domain WT60_23840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family WT60_23845 PF00905 Penicillin binding protein transpeptidase domain WT60_23845 PF03717 Penicillin-binding Protein dimerisation domain WT60_23850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_23850 PF02203 Tar ligand binding domain homologue WT60_23850 PF00672 HAMP domain WT60_23860 PF00857 Isochorismatase family WT60_23865 PF13640 2OG-Fe(II) oxygenase superfamily WT60_23865 PF18331 PKHD-type hydroxylase C-terminal domain WT60_23875 PF07715 TonB-dependent Receptor Plug Domain WT60_23875 PF00593 TonB dependent receptor WT60_23880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WT60_23880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WT60_23890 PF01614 Bacterial transcriptional regulator WT60_23890 PF09339 IclR helix-turn-helix domain WT60_23895 PF00083 Sugar (and other) transporter WT60_23895 PF07690 Major Facilitator Superfamily WT60_23900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WT60_23905 PF02797 Chalcone and stilbene synthases, C-terminal domain WT60_23905 PF00195 Chalcone and stilbene synthases, N-terminal domain WT60_23910 PF00355 Rieske [2Fe-2S] domain WT60_23920 PF00027 Cyclic nucleotide-binding domain WT60_23920 PF13545 Crp-like helix-turn-helix domain WT60_23925 PF00196 Bacterial regulatory proteins, luxR family WT60_23925 PF00072 Response regulator receiver domain WT60_23930 PF00196 Bacterial regulatory proteins, luxR family WT60_23930 PF00072 Response regulator receiver domain WT60_23935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_23935 PF07730 Histidine kinase WT60_23935 PF05231 MASE1 WT60_23945 PF00384 Molybdopterin oxidoreductase WT60_23945 PF14710 Respiratory nitrate reductase alpha N-terminal WT60_23945 PF01568 Molydopterin dinucleotide binding domain WT60_23950 PF14711 Respiratory nitrate reductase beta C-terminal WT60_23950 PF13247 4Fe-4S dicluster domain WT60_23955 PF02613 Nitrate reductase delta subunit WT60_23960 PF02665 Nitrate reductase gamma subunit WT60_23965 PF09312 SurA N-terminal domain WT60_23965 PF00639 PPIC-type PPIASE domain WT60_23970 PF07690 Major Facilitator Superfamily WT60_24005 PF00361 Proton-conducting membrane transporter WT60_24010 PF00146 NADH dehydrogenase WT60_24020 PF00361 Proton-conducting membrane transporter WT60_24025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WT60_24030 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WT60_24040 PF00582 Universal stress protein family WT60_24065 PF02110 Hydroxyethylthiazole kinase family WT60_24070 PF10400 Virulence activator alpha C-term WT60_24070 PF03551 Transcriptional regulator PadR-like family WT60_24075 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_24075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_24100 PF07690 Major Facilitator Superfamily WT60_24110 PF00891 O-methyltransferase domain WT60_24110 PF16864 Dimerisation domain WT60_24115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WT60_24115 PF01872 RibD C-terminal domain WT60_24120 PF03781 Sulfatase-modifying factor enzyme 1 WT60_24120 PF12867 DinB superfamily WT60_24135 PF00925 GTP cyclohydrolase II WT60_24140 PF02321 Outer membrane efflux protein WT60_24145 PF00873 AcrB/AcrD/AcrF family WT60_24150 PF13533 Biotin-lipoyl like WT60_24160 PF07969 Amidohydrolase family WT60_24175 PF00004 ATPase family associated with various cellular activities (AAA) WT60_24175 PF17862 AAA+ lid domain WT60_24175 PF01434 Peptidase family M41 WT60_24200 PF00293 NUDIX domain WT60_24220 PF08543 Phosphomethylpyrimidine kinase WT60_24225 PF01547 Bacterial extracellular solute-binding protein WT60_24250 PF01139 tRNA-splicing ligase RtcB WT60_24265 PF08734 GYD domain WT60_24270 PF09587 Bacterial capsule synthesis protein PGA_cap WT60_24275 PF00012 Hsp70 protein WT60_24280 PF00012 Hsp70 protein WT60_24365 PF01555 DNA methylase WT60_24450 PF01381 Helix-turn-helix WT60_24455 PF05973 Phage derived protein Gp49-like (DUF891) WT60_24480 PF13614 AAA domain WT60_24495 PF05840 Bacteriophage replication gene A protein (GPA) WT60_24515 PF00145 C-5 cytosine-specific DNA methylase WT60_24560 PF03466 LysR substrate binding domain WT60_24560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_24575 PF00248 Aldo/keto reductase family WT60_24580 PF01527 Transposase WT60_24590 PF00975 Thioesterase domain WT60_24595 PF07859 alpha/beta hydrolase fold WT60_24600 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_24605 PF00668 Condensation domain WT60_24605 PF07993 Male sterility protein WT60_24605 PF00668 Condensation domain WT60_24605 PF13193 AMP-binding enzyme C-terminal domain WT60_24605 PF00501 AMP-binding enzyme WT60_24605 PF00550 Phosphopantetheine attachment site WT60_24605 PF07993 Male sterility protein WT60_24605 PF13193 AMP-binding enzyme C-terminal domain WT60_24605 PF00550 Phosphopantetheine attachment site WT60_24605 PF00501 AMP-binding enzyme WT60_24615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_24615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_24615 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_24620 PF16197 Ketoacyl-synthetase C-terminal extension WT60_24620 PF16197 Ketoacyl-synthetase C-terminal extension WT60_24620 PF00668 Condensation domain WT60_24620 PF00698 Acyl transferase domain WT60_24620 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_24620 PF00550 Phosphopantetheine attachment site WT60_24620 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_24620 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_24620 PF00698 Acyl transferase domain WT60_24620 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_24620 PF00550 Phosphopantetheine attachment site WT60_24620 PF00668 Condensation domain WT60_24625 PF00501 AMP-binding enzyme WT60_24625 PF07993 Male sterility protein WT60_24625 PF00550 Phosphopantetheine attachment site WT60_24625 PF00668 Condensation domain WT60_24625 PF13193 AMP-binding enzyme C-terminal domain WT60_24630 PF00550 Phosphopantetheine attachment site WT60_24630 PF00698 Acyl transferase domain WT60_24630 PF16197 Ketoacyl-synthetase C-terminal extension WT60_24630 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_24630 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_24630 PF08659 KR domain WT60_24635 PF00698 Acyl transferase domain WT60_24635 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_24635 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_24635 PF08659 KR domain WT60_24635 PF00550 Phosphopantetheine attachment site WT60_24635 PF14765 Polyketide synthase dehydratase WT60_24635 PF16197 Ketoacyl-synthetase C-terminal extension WT60_24640 PF00668 Condensation domain WT60_24640 PF00550 Phosphopantetheine attachment site WT60_24640 PF00975 Thioesterase domain WT60_24640 PF13193 AMP-binding enzyme C-terminal domain WT60_24640 PF00501 AMP-binding enzyme WT60_24650 PF12833 Helix-turn-helix domain WT60_24650 PF12852 Cupin WT60_24665 PF01425 Amidase WT60_24675 PF05717 IS66 Orf2 like protein WT60_24680 PF13007 Transposase C of IS166 homeodomain WT60_24680 PF13005 zinc-finger binding domain of transposase IS66 WT60_24680 PF13817 IS66 C-terminal element WT60_24680 PF03050 Transposase IS66 family WT60_24685 PF01527 Transposase WT60_24690 PF13276 HTH-like domain WT60_24690 PF13683 Integrase core domain WT60_24695 PF18331 PKHD-type hydroxylase C-terminal domain WT60_24695 PF13640 2OG-Fe(II) oxygenase superfamily WT60_24705 PF00528 Binding-protein-dependent transport system inner membrane component WT60_24710 PF00528 Binding-protein-dependent transport system inner membrane component WT60_24715 PF13416 Bacterial extracellular solute-binding protein WT60_24720 PF13817 IS66 C-terminal element WT60_24720 PF13007 Transposase C of IS166 homeodomain WT60_24720 PF13005 zinc-finger binding domain of transposase IS66 WT60_24720 PF03050 Transposase IS66 family WT60_24725 PF05717 IS66 Orf2 like protein WT60_24735 PF03459 TOBE domain WT60_24735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_24740 PF00005 ABC transporter WT60_24740 PF12857 TOBE-like domain WT60_24750 PF00528 Binding-protein-dependent transport system inner membrane component WT60_24755 PF00296 Luciferase-like monooxygenase WT60_24775 PF00571 CBS domain WT60_24775 PF00291 Pyridoxal-phosphate dependent enzyme WT60_24795 PF02321 Outer membrane efflux protein WT60_24800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_24800 PF00529 HlyD membrane-fusion protein of T1SS WT60_24805 PF00873 AcrB/AcrD/AcrF family WT60_24810 PF00486 Transcriptional regulatory protein, C terminal WT60_24810 PF00072 Response regulator receiver domain WT60_24815 PF00672 HAMP domain WT60_24815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_24815 PF00512 His Kinase A (phospho-acceptor) domain WT60_24825 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_24825 PF01610 Transposase WT60_24825 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_24835 PF00083 Sugar (and other) transporter WT60_24860 PF00005 ABC transporter WT60_24865 PF02653 Branched-chain amino acid transport system / permease component WT60_24870 PF02653 Branched-chain amino acid transport system / permease component WT60_24880 PF07715 TonB-dependent Receptor Plug Domain WT60_24880 PF00593 TonB dependent receptor WT60_24885 PF04773 FecR protein WT60_24885 PF16220 Domain of unknown function (DUF4880) WT60_24890 PF04542 Sigma-70 region 2 WT60_24890 PF08281 Sigma-70, region 4 WT60_24905 PF04542 Sigma-70 region 2 WT60_24905 PF08281 Sigma-70, region 4 WT60_24920 PF01557 Fumarylacetoacetate (FAA) hydrolase family WT60_24945 PF01699 Sodium/calcium exchanger protein WT60_24955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_24955 PF03466 LysR substrate binding domain WT60_24970 PF00654 Voltage gated chloride channel WT60_24980 PF04397 LytTr DNA-binding domain WT60_24980 PF00072 Response regulator receiver domain WT60_24985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_24985 PF07694 5TMR of 5TMR-LYT WT60_24985 PF06580 Histidine kinase WT60_25020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WT60_25025 PF00005 ABC transporter WT60_25030 PF00528 Binding-protein-dependent transport system inner membrane component WT60_25035 PF00528 Binding-protein-dependent transport system inner membrane component WT60_25040 PF13609 Gram-negative porin WT60_25045 PF07681 DoxX WT60_25050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WT60_25050 PF00034 Cytochrome c WT60_25055 PF05199 GMC oxidoreductase WT60_25055 PF00732 GMC oxidoreductase WT60_25070 PF04151 Bacterial pre-peptidase C-terminal domain WT60_25070 PF00082 Subtilase family WT60_25075 PF00690 Cation transporter/ATPase, N-terminus WT60_25075 PF00689 Cation transporting ATPase, C-terminus WT60_25090 PF00155 Aminotransferase class I and II WT60_25090 PF00392 Bacterial regulatory proteins, gntR family WT60_25095 PF00384 Molybdopterin oxidoreductase WT60_25100 PF01062 Bestrophin, RFP-TM, chloride channel WT60_25110 PF01566 Natural resistance-associated macrophage protein WT60_25115 PF00190 Cupin WT60_25120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_25130 PF00082 Subtilase family WT60_25130 PF12951 Passenger-associated-transport-repeat WT60_25130 PF03797 Autotransporter beta-domain WT60_25145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_25150 PF00528 Binding-protein-dependent transport system inner membrane component WT60_25155 PF00528 Binding-protein-dependent transport system inner membrane component WT60_25155 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_25160 PF00005 ABC transporter WT60_25160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_25165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_25165 PF00005 ABC transporter WT60_25180 PF03466 LysR substrate binding domain WT60_25180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_25195 PF01551 Peptidase family M23 WT60_25195 PF01476 LysM domain WT60_25205 PF13609 Gram-negative porin WT60_25215 PF00756 Putative esterase WT60_25220 PF02423 Ornithine cyclodeaminase/mu-crystallin family WT60_25230 PF00561 alpha/beta hydrolase fold WT60_25235 PF02254 TrkA-N domain WT60_25235 PF07885 Ion channel WT60_25260 PF02203 Tar ligand binding domain homologue WT60_25260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_25260 PF00672 HAMP domain WT60_25265 PF07690 Major Facilitator Superfamily WT60_25285 PF09084 NMT1/THI5 like WT60_25295 PF00743 Flavin-binding monooxygenase-like WT60_25300 PF00106 short chain dehydrogenase WT60_25310 PF00561 alpha/beta hydrolase fold WT60_25320 PF00797 N-acetyltransferase WT60_25335 PF01053 Cys/Met metabolism PLP-dependent enzyme WT60_25340 PF01037 Lrp/AsnC ligand binding domain WT60_25345 PF01425 Amidase WT60_25355 PF01389 OmpA-like transmembrane domain WT60_25355 PF00691 OmpA family WT60_25360 PF13018 Extended Signal Peptide of Type V secretion system WT60_25360 PF05658 Head domain of trimeric autotransporter adhesin WT60_25360 PF03895 YadA-like membrane anchor domain WT60_25360 PF05662 Coiled stalk of trimeric autotransporter adhesin WT60_25365 PF07690 Major Facilitator Superfamily WT60_25370 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_25370 PF14759 Reductase C-terminal WT60_25380 PF00171 Aldehyde dehydrogenase family WT60_25385 PF03447 Homoserine dehydrogenase, NAD binding domain WT60_25385 PF01958 Domain of unknown function DUF108 WT60_25390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_25390 PF00205 Thiamine pyrophosphate enzyme, central domain WT60_25390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_25400 PF01614 Bacterial transcriptional regulator WT60_25400 PF09339 IclR helix-turn-helix domain WT60_25405 PF12697 Alpha/beta hydrolase family WT60_25420 PF00355 Rieske [2Fe-2S] domain WT60_25430 PF00355 Rieske [2Fe-2S] domain WT60_25435 PF13609 Gram-negative porin WT60_25440 PF09339 IclR helix-turn-helix domain WT60_25440 PF01614 Bacterial transcriptional regulator WT60_25450 PF00881 Nitroreductase family WT60_25455 PF00149 Calcineurin-like phosphoesterase WT60_25460 PF02308 MgtC family WT60_25465 PF00196 Bacterial regulatory proteins, luxR family WT60_25465 PF03472 Autoinducer binding domain WT60_25475 PF00765 Autoinducer synthase WT60_25485 PF00925 GTP cyclohydrolase II WT60_25490 PF00478 IMP dehydrogenase / GMP reductase domain WT60_25490 PF00571 CBS domain WT60_25505 PF13609 Gram-negative porin WT60_25520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_25525 PF00583 Acetyltransferase (GNAT) family WT60_25540 PF13609 Gram-negative porin WT60_25555 PF13520 Amino acid permease WT60_25560 PF00202 Aminotransferase class-III WT60_25565 PF00171 Aldehyde dehydrogenase family WT60_25570 PF00196 Bacterial regulatory proteins, luxR family WT60_25580 PF17409 MoaF C-terminal domain WT60_25580 PF10703 MoaF N-terminal domain WT60_25600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_25600 PF03466 LysR substrate binding domain WT60_25610 PF01546 Peptidase family M20/M25/M40 WT60_25610 PF07687 Peptidase dimerisation domain WT60_25620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_25620 PF03466 LysR substrate binding domain WT60_25630 PF18081 Fanconi anemia-associated nuclease SAP domain WT60_25630 PF08774 VRR-NUC domain WT60_25640 PF00294 pfkB family carbohydrate kinase WT60_25645 PF01156 Inosine-uridine preferring nucleoside hydrolase WT60_25650 PF00296 Luciferase-like monooxygenase WT60_25685 PF00816 H-NS histone family WT60_25695 PF00324 Amino acid permease WT60_25710 PF00106 short chain dehydrogenase WT60_25730 PF13823 Alcohol dehydrogenase GroES-associated WT60_25730 PF08240 Alcohol dehydrogenase GroES-like domain WT60_25730 PF00107 Zinc-binding dehydrogenase WT60_25740 PF00582 Universal stress protein family WT60_25750 PF00582 Universal stress protein family WT60_25760 PF00196 Bacterial regulatory proteins, luxR family WT60_25760 PF00072 Response regulator receiver domain WT60_25795 PF01494 FAD binding domain WT60_25815 PF08453 Peptidase family M9 N-terminal WT60_25815 PF01752 Collagenase WT60_25820 PF01757 Acyltransferase family WT60_25840 PF01339 CheB methylesterase WT60_25840 PF00072 Response regulator receiver domain WT60_25845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_25845 PF13188 PAS domain WT60_25845 PF00072 Response regulator receiver domain WT60_25845 PF08448 PAS fold WT60_25845 PF00512 His Kinase A (phospho-acceptor) domain WT60_25850 PF07690 Major Facilitator Superfamily WT60_25855 PF03328 HpcH/HpaI aldolase/citrate lyase family WT60_25905 PF00155 Aminotransferase class I and II WT60_25910 PF00324 Amino acid permease WT60_25915 PF01037 Lrp/AsnC ligand binding domain WT60_25920 PF02547 Queuosine biosynthesis protein WT60_25935 PF00534 Glycosyl transferases group 1 WT60_25940 PF17882 OAA-family lectin sugar binding domain WT60_25950 PF03006 Haemolysin-III related WT60_25960 PF13458 Periplasmic binding protein WT60_25990 PF07519 Tannase and feruloyl esterase WT60_26000 PF13193 AMP-binding enzyme C-terminal domain WT60_26000 PF00501 AMP-binding enzyme WT60_26005 PF00171 Aldehyde dehydrogenase family WT60_26010 PF00378 Enoyl-CoA hydratase/isomerase WT60_26045 PF00501 AMP-binding enzyme WT60_26045 PF14535 AMP-binding enzyme C-terminal domain WT60_26065 PF00196 Bacterial regulatory proteins, luxR family WT60_26065 PF00072 Response regulator receiver domain WT60_26075 PF00355 Rieske [2Fe-2S] domain WT60_26080 PF04820 Tryptophan halogenase WT60_26085 PF08933 Domain of unknown function (DUF1864) WT60_26090 PF04820 Tryptophan halogenase WT60_26105 PF05717 IS66 Orf2 like protein WT60_26110 PF03050 Transposase IS66 family WT60_26110 PF13005 zinc-finger binding domain of transposase IS66 WT60_26110 PF13817 IS66 C-terminal element WT60_26110 PF13007 Transposase C of IS166 homeodomain WT60_26125 PF03328 HpcH/HpaI aldolase/citrate lyase family WT60_26130 PF07690 Major Facilitator Superfamily WT60_26135 PF08666 SAF domain WT60_26135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus WT60_26140 PF00356 Bacterial regulatory proteins, lacI family WT60_26155 PF04185 Phosphoesterase family WT60_26160 PF14376 Haem-binding domain WT60_26160 PF03150 Di-haem cytochrome c peroxidase WT60_26160 PF00034 Cytochrome c WT60_26165 PF00654 Voltage gated chloride channel WT60_26175 PF00106 short chain dehydrogenase WT60_26185 PF07690 Major Facilitator Superfamily WT60_26190 PF07969 Amidohydrolase family WT60_26195 PF13556 PucR C-terminal helix-turn-helix domain WT60_26195 PF17853 GGDEF-like domain WT60_26200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin WT60_26215 PF13609 Gram-negative porin WT60_26225 PF03466 LysR substrate binding domain WT60_26225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_26230 PF04632 Fusaric acid resistance protein family WT60_26245 PF03576 Peptidase family S58 WT60_26255 PF00072 Response regulator receiver domain WT60_26255 PF00196 Bacterial regulatory proteins, luxR family WT60_26270 PF01476 LysM domain WT60_26270 PF01551 Peptidase family M23 WT60_26275 PF00171 Aldehyde dehydrogenase family WT60_26280 PF00202 Aminotransferase class-III WT60_26285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_26285 PF03466 LysR substrate binding domain WT60_26300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_26300 PF00672 HAMP domain WT60_26300 PF02203 Tar ligand binding domain homologue WT60_26310 PF13193 AMP-binding enzyme C-terminal domain WT60_26310 PF00501 AMP-binding enzyme WT60_26315 PF13545 Crp-like helix-turn-helix domain WT60_26315 PF00027 Cyclic nucleotide-binding domain WT60_26325 PF01165 Ribosomal protein S21 WT60_26335 PF00313 'Cold-shock' DNA-binding domain WT60_26355 PF00873 AcrB/AcrD/AcrF family WT60_26360 PF13533 Biotin-lipoyl like WT60_26370 PF00072 Response regulator receiver domain WT60_26370 PF00486 Transcriptional regulatory protein, C terminal WT60_26375 PF00672 HAMP domain WT60_26375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_26375 PF00512 His Kinase A (phospho-acceptor) domain WT60_26385 PF00155 Aminotransferase class I and II WT60_26385 PF00392 Bacterial regulatory proteins, gntR family WT60_26395 PF00561 alpha/beta hydrolase fold WT60_26410 PF00583 Acetyltransferase (GNAT) family WT60_26420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_26435 PF00440 Bacterial regulatory proteins, tetR family WT60_26435 PF16925 Tetracyclin repressor-like, C-terminal domain WT60_26445 PF07690 Major Facilitator Superfamily WT60_26450 PF00857 Isochorismatase family WT60_26480 PF10017 Histidine-specific methyltransferase, SAM-dependent WT60_26485 PF12867 DinB superfamily WT60_26485 PF03781 Sulfatase-modifying factor enzyme 1 WT60_26495 PF00842 Alanine racemase, C-terminal domain WT60_26495 PF01168 Alanine racemase, N-terminal domain WT60_26505 PF00378 Enoyl-CoA hydratase/isomerase WT60_26520 PF13609 Gram-negative porin WT60_26535 PF05995 Cysteine dioxygenase type I WT60_26540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_26540 PF03466 LysR substrate binding domain WT60_26545 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_26545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_26545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain WT60_26550 PF00296 Luciferase-like monooxygenase WT60_26555 PF00596 Class II Aldolase and Adducin N-terminal domain WT60_26570 PF00005 ABC transporter WT60_26585 PF03473 MOSC domain WT60_26585 PF03476 MOSC N-terminal beta barrel domain WT60_26585 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_26590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_26590 PF08521 Two-component sensor kinase N-terminal WT60_26590 PF00512 His Kinase A (phospho-acceptor) domain WT60_26595 PF00072 Response regulator receiver domain WT60_26595 PF00486 Transcriptional regulatory protein, C terminal WT60_26610 PF08402 TOBE domain WT60_26610 PF00005 ABC transporter WT60_26615 PF13609 Gram-negative porin WT60_26630 PF12833 Helix-turn-helix domain WT60_26630 PF02311 AraC-like ligand binding domain WT60_26635 PF03328 HpcH/HpaI aldolase/citrate lyase family WT60_26640 PF01557 Fumarylacetoacetate (FAA) hydrolase family WT60_26650 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WT60_26655 PF00171 Aldehyde dehydrogenase family WT60_26660 PF01557 Fumarylacetoacetate (FAA) hydrolase family WT60_26665 PF01557 Fumarylacetoacetate (FAA) hydrolase family WT60_26670 PF01047 MarR family WT60_26685 PF00072 Response regulator receiver domain WT60_26685 PF00486 Transcriptional regulatory protein, C terminal WT60_26690 PF00672 HAMP domain WT60_26690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_26690 PF00512 His Kinase A (phospho-acceptor) domain WT60_26700 PF00296 Luciferase-like monooxygenase WT60_26705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain WT60_26705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_26710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain WT60_26710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_26730 PF12833 Helix-turn-helix domain WT60_26730 PF06719 AraC-type transcriptional regulator N-terminus WT60_26735 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_26735 PF01799 [2Fe-2S] binding domain WT60_26740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WT60_26745 PF00072 Response regulator receiver domain WT60_26745 PF00486 Transcriptional regulatory protein, C terminal WT60_26750 PF13537 Glutamine amidotransferase domain WT60_26750 PF00733 Asparagine synthase WT60_26765 PF01204 Trehalase WT60_26775 PF07690 Major Facilitator Superfamily WT60_26780 PF06224 Winged helix DNA-binding domain WT60_26830 PF01965 DJ-1/PfpI family WT60_26830 PF12833 Helix-turn-helix domain WT60_26835 PF00581 Rhodanese-like domain WT60_26855 PF00072 Response regulator receiver domain WT60_26855 PF00486 Transcriptional regulatory protein, C terminal WT60_26860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_26860 PF00512 His Kinase A (phospho-acceptor) domain WT60_26875 PF18029 Glyoxalase-like domain WT60_26890 PF02638 Glycosyl hydrolase-like 10 WT60_26915 PF00034 Cytochrome c WT60_26925 PF01734 Patatin-like phospholipase WT60_26930 PF00512 His Kinase A (phospho-acceptor) domain WT60_26930 PF00672 HAMP domain WT60_26930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_26935 PF00072 Response regulator receiver domain WT60_26935 PF00486 Transcriptional regulatory protein, C terminal WT60_26940 PF04960 Glutaminase WT60_26945 PF00211 Adenylate and Guanylate cyclase catalytic domain WT60_26960 PF00296 Luciferase-like monooxygenase WT60_26965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_26970 PF00005 ABC transporter WT60_26970 PF12704 MacB-like periplasmic core domain WT60_26970 PF02687 FtsX-like permease family WT60_26975 PF02321 Outer membrane efflux protein WT60_26990 PF00501 AMP-binding enzyme WT60_26990 PF13193 AMP-binding enzyme C-terminal domain WT60_26995 PF00378 Enoyl-CoA hydratase/isomerase WT60_27000 PF00378 Enoyl-CoA hydratase/isomerase WT60_27005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_27005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WT60_27010 PF00171 Aldehyde dehydrogenase family WT60_27015 PF13193 AMP-binding enzyme C-terminal domain WT60_27015 PF00501 AMP-binding enzyme WT60_27020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WT60_27020 PF02770 Acyl-CoA dehydrogenase, middle domain WT60_27020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_27025 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term WT60_27025 PF12833 Helix-turn-helix domain WT60_27035 PF01145 SPFH domain / Band 7 family WT60_27045 PF00561 alpha/beta hydrolase fold WT60_27045 PF00106 short chain dehydrogenase WT60_27060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_27060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_27070 PF00171 Aldehyde dehydrogenase family WT60_27075 PF03466 LysR substrate binding domain WT60_27075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_27110 PF00860 Permease family WT60_27125 PF01590 GAF domain WT60_27125 PF02954 Bacterial regulatory protein, Fis family WT60_27125 PF00158 Sigma-54 interaction domain WT60_27140 PF00005 ABC transporter WT60_27145 PF12399 Branched-chain amino acid ATP-binding cassette transporter WT60_27145 PF00005 ABC transporter WT60_27150 PF11862 Domain of unknown function (DUF3382) WT60_27150 PF02653 Branched-chain amino acid transport system / permease component WT60_27155 PF02653 Branched-chain amino acid transport system / permease component WT60_27160 PF13458 Periplasmic binding protein WT60_27175 PF00106 short chain dehydrogenase WT60_27185 PF07859 alpha/beta hydrolase fold WT60_27195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WT60_27195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WT60_27200 PF05853 beta-keto acid cleavage enzyme WT60_27205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system WT60_27210 PF01965 DJ-1/PfpI family WT60_27210 PF12833 Helix-turn-helix domain WT60_27220 PF04151 Bacterial pre-peptidase C-terminal domain WT60_27220 PF04389 Peptidase family M28 WT60_27225 PF00267 Gram-negative porin WT60_27235 PF00551 Formyl transferase WT60_27245 PF04069 Substrate binding domain of ABC-type glycine betaine transport system WT60_27250 PF00175 Oxidoreductase NAD-binding domain WT60_27250 PF00111 2Fe-2S iron-sulfur cluster binding domain WT60_27250 PF00970 Oxidoreductase FAD-binding domain WT60_27255 PF00355 Rieske [2Fe-2S] domain WT60_27255 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WT60_27265 PF01012 Electron transfer flavoprotein domain WT60_27265 PF00766 Electron transfer flavoprotein FAD-binding domain WT60_27270 PF13183 4Fe-4S dicluster domain WT60_27270 PF02754 Cysteine-rich domain WT60_27275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WT60_27285 PF01244 Membrane dipeptidase (Peptidase family M19) WT60_27290 PF00464 Serine hydroxymethyltransferase WT60_27295 PF01965 DJ-1/PfpI family WT60_27295 PF12833 Helix-turn-helix domain WT60_27300 PF08240 Alcohol dehydrogenase GroES-like domain WT60_27300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WT60_27310 PF13533 Biotin-lipoyl like WT60_27315 PF02321 Outer membrane efflux protein WT60_27320 PF00535 Glycosyl transferase family 2 WT60_27325 PF07690 Major Facilitator Superfamily WT60_27330 PF03033 Glycosyltransferase family 28 N-terminal domain WT60_27335 PF00561 alpha/beta hydrolase fold WT60_27395 PF04717 Type VI secretion system, phage-baseplate injector WT60_27400 PF04717 Type VI secretion system, phage-baseplate injector WT60_27405 PF17871 AAA lid domain WT60_27405 PF10431 C-terminal, D2-small domain, of ClpB protein WT60_27405 PF07724 AAA domain (Cdc48 subfamily) WT60_27405 PF00004 ATPase family associated with various cellular activities (AAA) WT60_27445 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WT60_27445 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain WT60_27475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WT60_27475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WT60_27480 PF00266 Aminotransferase class-V WT60_27485 PF01965 DJ-1/PfpI family WT60_27490 PF12833 Helix-turn-helix domain WT60_27490 PF01965 DJ-1/PfpI family WT60_27495 PF04632 Fusaric acid resistance protein family WT60_27500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_27500 PF03466 LysR substrate binding domain WT60_27505 PF00180 Isocitrate/isopropylmalate dehydrogenase WT60_27515 PF07690 Major Facilitator Superfamily WT60_27520 PF08379 Bacterial transglutaminase-like N-terminal region WT60_27520 PF01841 Transglutaminase-like superfamily WT60_27525 PF14403 Circularly permuted ATP-grasp type 2 WT60_27525 PF04168 A predicted alpha-helical domain with a conserved ER motif. WT60_27545 PF14403 Circularly permuted ATP-grasp type 2 WT60_27565 PF13542 Helix-turn-helix domain of transposase family ISL3 WT60_27565 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WT60_27565 PF01610 Transposase WT60_27570 PF10417 C-terminal domain of 1-Cys peroxiredoxin WT60_27570 PF00578 AhpC/TSA family WT60_27575 PF13192 Thioredoxin domain WT60_27575 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_27595 PF00501 AMP-binding enzyme WT60_27600 PF00753 Metallo-beta-lactamase superfamily WT60_27605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WT60_27605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WT60_27610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WT60_27610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WT60_27620 PF00501 AMP-binding enzyme WT60_27620 PF13193 AMP-binding enzyme C-terminal domain WT60_27635 PF02867 Ribonucleotide reductase, barrel domain WT60_27635 PF00317 Ribonucleotide reductase, all-alpha domain WT60_27635 PF03477 ATP cone domain WT60_27640 PF00528 Binding-protein-dependent transport system inner membrane component WT60_27650 PF00005 ABC transporter WT60_27665 PF12833 Helix-turn-helix domain WT60_27665 PF12852 Cupin WT60_27670 PF00118 TCP-1/cpn60 chaperonin family WT60_27675 PF00166 Chaperonin 10 Kd subunit WT60_27690 PF00491 Arginase family WT60_27695 PF00171 Aldehyde dehydrogenase family WT60_27705 PF00117 Glutamine amidotransferase class-I WT60_27705 PF00958 GMP synthase C terminal domain WT60_27705 PF02540 NAD synthase WT60_27710 PF00120 Glutamine synthetase, catalytic domain WT60_27715 PF00202 Aminotransferase class-III WT60_27720 PF13416 Bacterial extracellular solute-binding protein WT60_27725 PF08402 TOBE domain WT60_27725 PF00005 ABC transporter WT60_27730 PF00528 Binding-protein-dependent transport system inner membrane component WT60_27735 PF00528 Binding-protein-dependent transport system inner membrane component WT60_27745 PF01266 FAD dependent oxidoreductase WT60_27755 PF07690 Major Facilitator Superfamily WT60_27760 PF16925 Tetracyclin repressor-like, C-terminal domain WT60_27760 PF00440 Bacterial regulatory proteins, tetR family WT60_27770 PF00501 AMP-binding enzyme WT60_27770 PF13193 AMP-binding enzyme C-terminal domain WT60_27775 PF00668 Condensation domain WT60_27775 PF00975 Thioesterase domain WT60_27775 PF00550 Phosphopantetheine attachment site WT60_27775 PF13193 AMP-binding enzyme C-terminal domain WT60_27775 PF00501 AMP-binding enzyme WT60_27780 PF00291 Pyridoxal-phosphate dependent enzyme WT60_27790 PF00668 Condensation domain WT60_27790 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_27790 PF16197 Ketoacyl-synthetase C-terminal extension WT60_27790 PF00550 Phosphopantetheine attachment site WT60_27790 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_27790 PF00698 Acyl transferase domain WT60_27800 PF01266 FAD dependent oxidoreductase WT60_27805 PF01266 FAD dependent oxidoreductase WT60_27810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_27810 PF02203 Tar ligand binding domain homologue WT60_27810 PF00672 HAMP domain WT60_27815 PF05425 Copper resistance protein D WT60_27850 PF02811 PHP domain WT60_27850 PF14716 Helix-hairpin-helix domain WT60_27850 PF14791 DNA polymerase beta thumb WT60_27855 PF01757 Acyltransferase family WT60_27860 PF00768 D-alanyl-D-alanine carboxypeptidase WT60_27880 PF00155 Aminotransferase class I and II WT60_27880 PF00392 Bacterial regulatory proteins, gntR family WT60_27885 PF01613 Flavin reductase like domain WT60_27910 PF13276 HTH-like domain WT60_27910 PF13683 Integrase core domain WT60_27925 PF00474 Sodium:solute symporter family WT60_27935 PF16177 Acetyl-coenzyme A synthetase N-terminus WT60_27935 PF00501 AMP-binding enzyme WT60_27935 PF13193 AMP-binding enzyme C-terminal domain WT60_27945 PF03350 Uncharacterized protein family, UPF0114 WT60_27955 PF00210 Ferritin-like domain WT60_27960 PF01177 Asp/Glu/Hydantoin racemase WT60_27975 PF01618 MotA/TolQ/ExbB proton channel family WT60_27980 PF02472 Biopolymer transport protein ExbD/TolR WT60_27985 PF03466 LysR substrate binding domain WT60_27985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_27990 PF05726 Pirin C-terminal cupin domain WT60_27990 PF02678 Pirin WT60_28000 PF10636 Hemin uptake protein hemP WT60_28005 PF03928 Haem-degrading WT60_28010 PF12801 4Fe-4S binding domain WT60_28010 PF04205 FMN-binding domain WT60_28015 PF03239 Iron permease FTR1 family WT60_28020 PF13473 Cupredoxin-like domain WT60_28025 PF10634 Fe2+ transport protein WT60_28030 PF00271 Helicase conserved C-terminal domain WT60_28030 PF04851 Type III restriction enzyme, res subunit WT60_28030 PF02151 UvrB/uvrC motif WT60_28030 PF12344 Ultra-violet resistance protein B WT60_28030 PF17757 UvrB interaction domain WT60_28035 PF00155 Aminotransferase class I and II WT60_28045 PF00248 Aldo/keto reductase family WT60_28050 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ WT60_28060 PF00376 MerR family regulatory protein WT60_28060 PF09278 MerR, DNA binding WT60_28070 PF05717 IS66 Orf2 like protein WT60_28075 PF01527 Transposase WT60_28080 PF13276 HTH-like domain WT60_28080 PF13683 Integrase core domain WT60_28085 PF13005 zinc-finger binding domain of transposase IS66 WT60_28085 PF13007 Transposase C of IS166 homeodomain WT60_28085 PF13817 IS66 C-terminal element WT60_28085 PF03050 Transposase IS66 family WT60_28120 PF00171 Aldehyde dehydrogenase family WT60_28125 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase WT60_28130 PF00528 Binding-protein-dependent transport system inner membrane component WT60_28135 PF00528 Binding-protein-dependent transport system inner membrane component WT60_28140 PF08402 TOBE domain WT60_28140 PF00005 ABC transporter WT60_28150 PF00266 Aminotransferase class-V WT60_28155 PF07690 Major Facilitator Superfamily WT60_28160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WT60_28160 PF08501 Shikimate dehydrogenase substrate binding domain WT60_28165 PF01220 Dehydroquinase class II WT60_28170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WT60_28175 PF02652 L-lactate permease WT60_28185 PF01274 Malate synthase WT60_28205 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_28205 PF04324 BFD-like [2Fe-2S] binding domain WT60_28215 PF01266 FAD dependent oxidoreductase WT60_28215 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WT60_28220 PF05544 Proline racemase WT60_28225 PF00701 Dihydrodipicolinate synthetase family WT60_28230 PF13520 Amino acid permease WT60_28235 PF00171 Aldehyde dehydrogenase family WT60_28240 PF02615 Malate/L-lactate dehydrogenase WT60_28245 PF07690 Major Facilitator Superfamily WT60_28250 PF07690 Major Facilitator Superfamily WT60_28265 PF10518 TAT (twin-arginine translocation) pathway signal sequence WT60_28265 PF04261 Dyp-type peroxidase family WT60_28275 PF00528 Binding-protein-dependent transport system inner membrane component WT60_28280 PF00005 ABC transporter WT60_28280 PF08402 TOBE domain WT60_28285 PF07681 DoxX WT60_28290 PF02652 L-lactate permease WT60_28295 PF02589 LUD domain WT60_28300 PF02589 LUD domain WT60_28300 PF13183 4Fe-4S dicluster domain WT60_28300 PF11870 Domain of unknown function (DUF3390) WT60_28305 PF02754 Cysteine-rich domain WT60_28310 PF00392 Bacterial regulatory proteins, gntR family WT60_28310 PF07729 FCD domain WT60_28325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain WT60_28325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WT60_28330 PF00528 Binding-protein-dependent transport system inner membrane component WT60_28335 PF09383 NIL domain WT60_28335 PF00005 ABC transporter WT60_28340 PF00296 Luciferase-like monooxygenase WT60_28345 PF03180 NLPA lipoprotein WT60_28355 PF00196 Bacterial regulatory proteins, luxR family WT60_28355 PF03472 Autoinducer binding domain WT60_28360 PF16197 Ketoacyl-synthetase C-terminal extension WT60_28360 PF00550 Phosphopantetheine attachment site WT60_28360 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_28360 PF00668 Condensation domain WT60_28360 PF00698 Acyl transferase domain WT60_28360 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_28380 PF00202 Aminotransferase class-III WT60_28385 PF00171 Aldehyde dehydrogenase family WT60_28390 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_28390 PF16197 Ketoacyl-synthetase C-terminal extension WT60_28390 PF14765 Polyketide synthase dehydratase WT60_28390 PF00550 Phosphopantetheine attachment site WT60_28390 PF08659 KR domain WT60_28390 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_28390 PF08242 Methyltransferase domain WT60_28395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain WT60_28395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WT60_28405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WT60_28405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WT60_28410 PF00501 AMP-binding enzyme WT60_28410 PF13193 AMP-binding enzyme C-terminal domain WT60_28420 PF00698 Acyl transferase domain WT60_28425 PF00501 AMP-binding enzyme WT60_28445 PF00375 Sodium:dicarboxylate symporter family WT60_28455 PF02321 Outer membrane efflux protein WT60_28460 PF00873 AcrB/AcrD/AcrF family WT60_28465 PF13533 Biotin-lipoyl like WT60_28470 PF07859 alpha/beta hydrolase fold WT60_28475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_28475 PF03466 LysR substrate binding domain WT60_28495 PF01361 Tautomerase enzyme WT60_28500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_28500 PF03466 LysR substrate binding domain WT60_28505 PF02769 AIR synthase related protein, C-terminal domain WT60_28505 PF00586 AIR synthase related protein, N-terminal domain WT60_28515 PF00392 Bacterial regulatory proteins, gntR family WT60_28515 PF00155 Aminotransferase class I and II WT60_28520 PF00202 Aminotransferase class-III WT60_28525 PF00171 Aldehyde dehydrogenase family WT60_28535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_28535 PF08447 PAS fold WT60_28540 PF00108 Thiolase, N-terminal domain WT60_28540 PF02803 Thiolase, C-terminal domain WT60_28545 PF01614 Bacterial transcriptional regulator WT60_28545 PF09339 IclR helix-turn-helix domain WT60_28550 PF00440 Bacterial regulatory proteins, tetR family WT60_28550 PF08362 YcdC-like protein, C-terminal region WT60_28555 PF07690 Major Facilitator Superfamily WT60_28560 PF01546 Peptidase family M20/M25/M40 WT60_28560 PF07687 Peptidase dimerisation domain WT60_28565 PF03466 LysR substrate binding domain WT60_28565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_28570 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_28575 PF01757 Acyltransferase family WT60_28585 PF03180 NLPA lipoprotein WT60_28590 PF13609 Gram-negative porin WT60_28605 PF00583 Acetyltransferase (GNAT) family WT60_28610 PF02734 DAK2 domain WT60_28615 PF02733 Dak1 domain WT60_28620 PF00107 Zinc-binding dehydrogenase WT60_28620 PF08240 Alcohol dehydrogenase GroES-like domain WT60_28630 PF13407 Periplasmic binding protein domain WT60_28635 PF02653 Branched-chain amino acid transport system / permease component WT60_28640 PF00005 ABC transporter WT60_28645 PF02502 Ribose/Galactose Isomerase WT60_28655 PF10459 Peptidase S46 WT60_28660 PF13609 Gram-negative porin WT60_28680 PF00005 ABC transporter WT60_28680 PF08402 TOBE domain WT60_28690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_28690 PF03466 LysR substrate binding domain WT60_28700 PF07715 TonB-dependent Receptor Plug Domain WT60_28700 PF00593 TonB dependent receptor WT60_28705 PF05171 Haemin-degrading HemS.ChuX domain WT60_28710 PF01497 Periplasmic binding protein WT60_28715 PF01032 FecCD transport family WT60_28720 PF00005 ABC transporter WT60_28725 PF03458 UPF0126 domain WT60_28730 PF00905 Penicillin binding protein transpeptidase domain WT60_28730 PF00912 Transglycosylase WT60_28730 PF17092 Penicillin-binding protein OB-like domain WT60_28735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_28735 PF03466 LysR substrate binding domain WT60_28740 PF01212 Beta-eliminating lyase WT60_28750 PF01654 Cytochrome bd terminal oxidase subunit I WT60_28755 PF02322 Cytochrome bd terminal oxidase subunit II WT60_28780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WT60_28790 PF00884 Sulfatase WT60_28815 PF00403 Heavy-metal-associated domain WT60_28830 PF07690 Major Facilitator Superfamily WT60_28840 PF02308 MgtC family WT60_28850 PF03466 LysR substrate binding domain WT60_28850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_28855 PF07690 Major Facilitator Superfamily WT60_28860 PF02203 Tar ligand binding domain homologue WT60_28860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_28860 PF00672 HAMP domain WT60_28865 PF04055 Radical SAM superfamily WT60_28865 PF13186 Iron-sulfur cluster-binding domain WT60_28895 PF04303 PrpF protein WT60_28900 PF00694 Aconitase C-terminal domain WT60_28900 PF00330 Aconitase family (aconitate hydratase) WT60_28905 PF00285 Citrate synthase, C-terminal domain WT60_28915 PF02954 Bacterial regulatory protein, Fis family WT60_28915 PF00158 Sigma-54 interaction domain WT60_28915 PF06506 Propionate catabolism activator WT60_28920 PF00672 HAMP domain WT60_28920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WT60_28920 PF02203 Tar ligand binding domain homologue WT60_28930 PF00561 alpha/beta hydrolase fold WT60_28935 PF04072 Leucine carboxyl methyltransferase WT60_28955 PF08021 Siderophore-interacting FAD-binding domain WT60_28955 PF00005 ABC transporter WT60_28955 PF04954 Siderophore-interacting protein WT60_28955 PF00664 ABC transporter transmembrane region WT60_28960 PF00593 TonB dependent receptor WT60_28960 PF07715 TonB-dependent Receptor Plug Domain WT60_28975 PF00501 AMP-binding enzyme WT60_28975 PF00550 Phosphopantetheine attachment site WT60_28975 PF08242 Methyltransferase domain WT60_28975 PF00668 Condensation domain WT60_28985 PF00698 Acyl transferase domain WT60_28985 PF00668 Condensation domain WT60_28985 PF16197 Ketoacyl-synthetase C-terminal extension WT60_28985 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_28985 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_28985 PF00550 Phosphopantetheine attachment site WT60_28995 PF00975 Thioesterase domain WT60_29000 PF13193 AMP-binding enzyme C-terminal domain WT60_29000 PF00501 AMP-binding enzyme WT60_29015 PF01053 Cys/Met metabolism PLP-dependent enzyme WT60_29025 PF01557 Fumarylacetoacetate (FAA) hydrolase family WT60_29035 PF01425 Amidase WT60_29050 PF13607 Succinyl-CoA ligase like flavodoxin domain WT60_29050 PF13380 CoA binding domain WT60_29050 PF00583 Acetyltransferase (GNAT) family WT60_29060 PF00816 H-NS histone family WT60_29070 PF02954 Bacterial regulatory protein, Fis family WT60_29070 PF00158 Sigma-54 interaction domain WT60_29070 PF13185 GAF domain WT60_29095 PF03573 outer membrane porin, OprD family WT60_29100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_29100 PF00005 ABC transporter WT60_29105 PF00005 ABC transporter WT60_29105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_29110 PF00528 Binding-protein-dependent transport system inner membrane component WT60_29110 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_29115 PF00528 Binding-protein-dependent transport system inner membrane component WT60_29120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_29130 PF00854 POT family WT60_29160 PF00708 Acylphosphatase WT60_29165 PF01370 NAD dependent epimerase/dehydratase family WT60_29185 PF02401 LytB protein WT60_29190 PF04055 Radical SAM superfamily WT60_29190 PF06463 Molybdenum Cofactor Synthesis C WT60_29200 PF03466 LysR substrate binding domain WT60_29200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_29215 PF00529 HlyD membrane-fusion protein of T1SS WT60_29215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WT60_29220 PF02321 Outer membrane efflux protein WT60_29230 PF00202 Aminotransferase class-III WT60_29240 PF04328 Selenoprotein, putative WT60_29245 PF02554 Carbon starvation protein CstA WT60_29245 PF13722 5TM C-terminal transporter carbon starvation CstA WT60_29255 PF00561 alpha/beta hydrolase fold WT60_29265 PF03466 LysR substrate binding domain WT60_29265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_29270 PF07690 Major Facilitator Superfamily WT60_29275 PF07690 Major Facilitator Superfamily WT60_29310 PF01266 FAD dependent oxidoreductase WT60_29315 PF04324 BFD-like [2Fe-2S] binding domain WT60_29315 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_29325 PF01266 FAD dependent oxidoreductase WT60_29340 PF00171 Aldehyde dehydrogenase family WT60_29350 PF05378 Hydantoinase/oxoprolinase N-terminal region WT60_29350 PF01968 Hydantoinase/oxoprolinase WT60_29355 PF00005 ABC transporter WT60_29355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_29360 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_29360 PF00528 Binding-protein-dependent transport system inner membrane component WT60_29365 PF00528 Binding-protein-dependent transport system inner membrane component WT60_29395 PF00535 Glycosyl transferase family 2 WT60_29420 PF01478 Type IV leader peptidase family WT60_29420 PF06750 Bacterial Peptidase A24 N-terminal domain WT60_29435 PF04972 BON domain WT60_29435 PF00263 Bacterial type II and III secretion system protein WT60_29435 PF13629 Pilus formation protein N terminal region WT60_29460 PF13614 AAA domain WT60_29465 PF00437 Type II/IV secretion system protein WT60_29480 PF01037 Lrp/AsnC ligand binding domain WT60_29485 PF00155 Aminotransferase class I and II WT60_29500 PF13609 Gram-negative porin WT60_29505 PF00324 Amino acid permease WT60_29520 PF07690 Major Facilitator Superfamily WT60_29525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_29525 PF03466 LysR substrate binding domain WT60_29560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WT60_29560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WT60_29565 PF00296 Luciferase-like monooxygenase WT60_29570 PF01648 4'-phosphopantetheinyl transferase superfamily WT60_29585 PF01613 Flavin reductase like domain WT60_29605 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_29605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WT60_29610 PF00364 Biotin-requiring enzyme WT60_29610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WT60_29610 PF02817 e3 binding domain WT60_29615 PF02779 Transketolase, pyrimidine binding domain WT60_29615 PF02780 Transketolase, C-terminal domain WT60_29620 PF00676 Dehydrogenase E1 component WT60_29620 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal WT60_29655 PF03466 LysR substrate binding domain WT60_29655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WT60_29670 PF05199 GMC oxidoreductase WT60_29675 PF07992 Pyridine nucleotide-disulphide oxidoreductase WT60_29675 PF14759 Reductase C-terminal WT60_29695 PF02867 Ribonucleotide reductase, barrel domain WT60_29695 PF00317 Ribonucleotide reductase, all-alpha domain WT60_29695 PF03477 ATP cone domain WT60_29730 PF00011 Hsp20/alpha crystallin family WT60_29735 PF01568 Molydopterin dinucleotide binding domain WT60_29735 PF00384 Molybdopterin oxidoreductase WT60_29735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WT60_29740 PF12800 4Fe-4S binding domain WT60_29740 PF13247 4Fe-4S dicluster domain WT60_29745 PF04976 DMSO reductase anchor subunit (DmsC) WT60_29760 PF00905 Penicillin binding protein transpeptidase domain WT60_29760 PF17092 Penicillin-binding protein OB-like domain WT60_29760 PF00912 Transglycosylase WT60_29780 PF13609 Gram-negative porin WT60_29790 PF00975 Thioesterase domain WT60_29790 PF00550 Phosphopantetheine attachment site WT60_29790 PF00501 AMP-binding enzyme WT60_29790 PF00668 Condensation domain WT60_29790 PF13193 AMP-binding enzyme C-terminal domain WT60_29795 PF07690 Major Facilitator Superfamily WT60_29805 PF00975 Thioesterase domain WT60_29805 PF00550 Phosphopantetheine attachment site WT60_29805 PF00668 Condensation domain WT60_29805 PF13193 AMP-binding enzyme C-terminal domain WT60_29805 PF00501 AMP-binding enzyme WT60_29810 PF01527 Transposase WT60_29820 PF01425 Amidase WT60_29830 PF00873 AcrB/AcrD/AcrF family WT60_29840 PF00583 Acetyltransferase (GNAT) family WT60_29860 PF00005 ABC transporter WT60_29860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WT60_29865 PF00528 Binding-protein-dependent transport system inner membrane component WT60_29865 PF12911 N-terminal TM domain of oligopeptide transport permease C WT60_29870 PF00528 Binding-protein-dependent transport system inner membrane component WT60_29875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WT60_29880 PF07715 TonB-dependent Receptor Plug Domain WT60_29880 PF00593 TonB dependent receptor WT60_29885 PF08671 Anti-repressor SinI WT60_29885 PF01381 Helix-turn-helix WT60_29900 PF02472 Biopolymer transport protein ExbD/TolR WT60_29905 PF01618 MotA/TolQ/ExbB proton channel family WT60_29915 PF17200 Single Cache domain 2 WT60_29915 PF07730 Histidine kinase WT60_29920 PF00072 Response regulator receiver domain WT60_29920 PF00196 Bacterial regulatory proteins, luxR family WT60_29935 PF00563 EAL domain WT60_29935 PF00990 Diguanylate cyclase, GGDEF domain WT60_29935 PF08448 PAS fold WT60_29940 PF00561 alpha/beta hydrolase fold WT60_29945 PF01648 4'-phosphopantetheinyl transferase superfamily WT60_29965 PF00005 ABC transporter WT60_29965 PF12704 MacB-like periplasmic core domain WT60_29965 PF02687 FtsX-like permease family WT60_29970 PF00005 ABC transporter WT60_29980 PF00067 Cytochrome P450 WT60_29990 PF00109 Beta-ketoacyl synthase, N-terminal domain WT60_29990 PF02801 Beta-ketoacyl synthase, C-terminal domain WT60_29990 PF16197 Ketoacyl-synthetase C-terminal extension WT60_29990 PF08659 KR domain WT60_29990 PF00550 Phosphopantetheine attachment site WT60_29990 PF00698 Acyl transferase domain WT60_30010 PF00202 Aminotransferase class-III WT60_30020 PF00005 ABC transporter WT60_30025 PF00528 Binding-protein-dependent transport system inner membrane component WT60_30030 PF00497 Bacterial extracellular solute-binding proteins, family 3 WT60_30035 PF01048 Phosphorylase superfamily WT60_30040 PF13243 Squalene-hopene cyclase C-terminal domain WT60_30040 PF13249 Squalene-hopene cyclase N-terminal domain WT60_30065 PF00990 Diguanylate cyclase, GGDEF domain WT60_30065 PF05230 MASE2 domain WT60_30075 PF01339 CheB methylesterase WT60_30075 PF00072 Response regulator receiver domain WT60_30080 PF13188 PAS domain WT60_30080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WT60_30080 PF00512 His Kinase A (phospho-acceptor) domain WT60_30080 PF08448 PAS fold WT60_30080 PF00072 Response regulator receiver domain WT60_30085 PF03358 NADPH-dependent FMN reductase WT60_30090 PF08281 Sigma-70, region 4 WT60_30090 PF04542 Sigma-70 region 2 WT60_30100 PF03960 ArsC family WT60_30110 PF13614 AAA domain