locus-tag class description NIES4071_00070 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_00070 PF00400 WD domain, G-beta repeat NIES4071_00170 PF01420 Type I restriction modification DNA specificity domain NIES4071_00200 PF00011 Hsp20/alpha crystallin family NIES4071_00240 PF02384 N-6 DNA Methylase NIES4071_00260 PF08463 EcoEI R protein C-terminal NIES4071_00260 PF00271 Helicase conserved C-terminal domain NIES4071_00260 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIES4071_00260 PF04851 Type III restriction enzyme, res subunit NIES4071_00270 PF04851 Type III restriction enzyme, res subunit NIES4071_00270 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIES4071_00270 PF08463 EcoEI R protein C-terminal NIES4071_00270 PF00271 Helicase conserved C-terminal domain NIES4071_00350 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_00350 PF00589 Phage integrase family NIES4071_00370 PF02195 ParB-like nuclease domain NIES4071_00410 PF13614 AAA domain NIES4071_00420 PF02195 ParB-like nuclease domain NIES4071_00440 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NIES4071_00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_00450 PF01627 Hpt domain NIES4071_00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_00450 PF02895 Signal transducing histidine kinase, homodimeric domain NIES4071_00450 PF01584 CheW-like domain NIES4071_00450 PF07194 P2 response regulator binding domain NIES4071_00450 PF01627 Hpt domain NIES4071_00450 PF07194 P2 response regulator binding domain NIES4071_00450 PF02895 Signal transducing histidine kinase, homodimeric domain NIES4071_00450 PF01584 CheW-like domain NIES4071_00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_00610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NIES4071_00610 PF00326 Prolyl oligopeptidase family NIES4071_00690 PF12146 Serine aminopeptidase, S33 NIES4071_00710 PF00654 Voltage gated chloride channel NIES4071_00720 PF01523 Putative modulator of DNA gyrase NIES4071_00810 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_00810 PF08448 PAS fold NIES4071_00810 PF00072 Response regulator receiver domain NIES4071_00810 PF13188 PAS domain NIES4071_00810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_00950 PF12833 Helix-turn-helix domain NIES4071_00950 PF06719 AraC-type transcriptional regulator N-terminus NIES4071_00960 PF12680 SnoaL-like domain NIES4071_00980 PF00271 Helicase conserved C-terminal domain NIES4071_00980 PF00176 SNF2 family N-terminal domain NIES4071_00980 PF12419 SNF2 Helicase protein NIES4071_01000 PF00400 WD domain, G-beta repeat NIES4071_01000 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_01050 PF00762 Ferrochelatase NIES4071_01080 PF00400 WD domain, G-beta repeat NIES4071_01220 PF00144 Beta-lactamase NIES4071_01240 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NIES4071_01300 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NIES4071_01330 PF13476 AAA domain NIES4071_01350 PF07995 Glucose / Sorbosone dehydrogenase NIES4071_01360 PF12706 Beta-lactamase superfamily domain NIES4071_01370 PF03070 TENA/THI-4/PQQC family NIES4071_01390 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NIES4071_01400 PF04055 Radical SAM superfamily NIES4071_01400 PF13186 Iron-sulfur cluster-binding domain NIES4071_01420 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_01420 PF00072 Response regulator receiver domain NIES4071_01420 PF13188 PAS domain NIES4071_01420 PF08448 PAS fold NIES4071_01440 PF07690 Major Facilitator Superfamily NIES4071_01460 PF08479 POTRA domain, ShlB-type NIES4071_01460 PF17287 POTRA domain NIES4071_01460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NIES4071_01570 PF02163 Peptidase family M50 NIES4071_01600 PF03328 HpcH/HpaI aldolase/citrate lyase family NIES4071_01610 PF02347 Glycine cleavage system P-protein NIES4071_01630 PF08669 Glycine cleavage T-protein C-terminal barrel domain NIES4071_01630 PF01571 Aminomethyltransferase folate-binding domain NIES4071_01650 PF13614 AAA domain NIES4071_01670 PF00931 NB-ARC domain NIES4071_01670 PF00400 WD domain, G-beta repeat NIES4071_01710 PF00005 ABC transporter NIES4071_01710 PF00664 ABC transporter transmembrane region NIES4071_01740 PF00400 WD domain, G-beta repeat NIES4071_01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_01770 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_01780 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NIES4071_01780 PF17287 POTRA domain NIES4071_01780 PF08479 POTRA domain, ShlB-type NIES4071_01900 PF02018 Carbohydrate binding domain NIES4071_01900 PF00331 Glycosyl hydrolase family 10 NIES4071_01900 PF06452 Carbohydrate family 9 binding domain-like NIES4071_01920 PF02397 Bacterial sugar transferase NIES4071_01940 PF13614 AAA domain NIES4071_01940 PF02706 Chain length determinant protein NIES4071_01940 PF13807 G-rich domain on putative tyrosine kinase NIES4071_01950 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_01980 PF00535 Glycosyl transferase family 2 NIES4071_02000 PF01370 NAD dependent epimerase/dehydratase family NIES4071_02010 PF00534 Glycosyl transferases group 1 NIES4071_02010 PF13439 Glycosyltransferase Family 4 NIES4071_02050 PF00400 WD domain, G-beta repeat NIES4071_02080 PF12849 PBP superfamily domain NIES4071_02090 PF00106 short chain dehydrogenase NIES4071_02110 PF05368 NmrA-like family NIES4071_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_02130 PF03466 LysR substrate binding domain NIES4071_02160 PF03527 RHS protein NIES4071_02270 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_02290 PF00486 Transcriptional regulatory protein, C terminal NIES4071_02290 PF00072 Response regulator receiver domain NIES4071_02300 PF00580 UvrD/REP helicase N-terminal domain NIES4071_02300 PF13361 UvrD-like helicase C-terminal domain NIES4071_02320 PF01569 PAP2 superfamily NIES4071_02330 PF01522 Polysaccharide deacetylase NIES4071_02420 PF09382 RQC domain NIES4071_02420 PF16124 RecQ zinc-binding NIES4071_02420 PF00270 DEAD/DEAH box helicase NIES4071_02420 PF00271 Helicase conserved C-terminal domain NIES4071_02420 PF00570 HRDC domain NIES4071_02440 PF00403 Heavy-metal-associated domain NIES4071_02450 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_02480 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIES4071_02480 PF00578 AhpC/TSA family NIES4071_02500 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_02510 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_02520 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_02530 PF00005 ABC transporter NIES4071_02580 PF00781 Diacylglycerol kinase catalytic domain NIES4071_02580 PF02142 MGS-like domain NIES4071_02630 PF13180 PDZ domain NIES4071_02660 PF00924 Mechanosensitive ion channel NIES4071_02680 PF01594 AI-2E family transporter NIES4071_02720 PF00067 Cytochrome P450 NIES4071_02740 PF09557 Domain of unknown function (DUF2382) NIES4071_02740 PF05239 PRC-barrel domain NIES4071_02760 PF01594 AI-2E family transporter NIES4071_02820 PF00107 Zinc-binding dehydrogenase NIES4071_02820 PF13823 Alcohol dehydrogenase GroES-associated NIES4071_02820 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_02830 PF00107 Zinc-binding dehydrogenase NIES4071_02830 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_02830 PF13823 Alcohol dehydrogenase GroES-associated NIES4071_02840 PF01965 DJ-1/PfpI family NIES4071_02850 PF00248 Aldo/keto reductase family NIES4071_02880 PF00149 Calcineurin-like phosphoesterase NIES4071_02880 PF10518 TAT (twin-arginine translocation) pathway signal sequence NIES4071_02900 PF00072 Response regulator receiver domain NIES4071_02910 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NIES4071_02970 PF00092 von Willebrand factor type A domain NIES4071_02970 PF12450 von Willebrand factor NIES4071_02970 PF12034 Domain of unknown function (DUF3520) NIES4071_03010 PF00226 DnaJ domain NIES4071_03010 PF01556 DnaJ C terminal domain NIES4071_03010 PF00684 DnaJ central domain NIES4071_03020 PF00350 Dynamin family NIES4071_03040 PF00360 Phytochrome region NIES4071_03040 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_03040 PF01590 GAF domain NIES4071_03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_03040 PF08446 PAS fold NIES4071_03070 PF01522 Polysaccharide deacetylase NIES4071_03070 PF00457 Glycosyl hydrolases family 11 NIES4071_03070 PF03422 Carbohydrate binding module (family 6) NIES4071_03080 PF00005 ABC transporter NIES4071_03090 PF02361 Cobalt transport protein NIES4071_03100 PF02553 Cobalt transport protein component CbiN NIES4071_03110 PF01891 Cobalt uptake substrate-specific transmembrane region NIES4071_03140 PF01451 Low molecular weight phosphotyrosine protein phosphatase NIES4071_03150 PF00230 Major intrinsic protein NIES4071_03160 PF01022 Bacterial regulatory protein, arsR family NIES4071_03170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIES4071_03180 PF01475 Ferric uptake regulator family NIES4071_03220 PF01965 DJ-1/PfpI family NIES4071_03240 PF13823 Alcohol dehydrogenase GroES-associated NIES4071_03240 PF00107 Zinc-binding dehydrogenase NIES4071_03240 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_03260 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_03260 PF13823 Alcohol dehydrogenase GroES-associated NIES4071_03260 PF00107 Zinc-binding dehydrogenase NIES4071_03270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NIES4071_03270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIES4071_03390 PF00589 Phage integrase family NIES4071_03460 PF00248 Aldo/keto reductase family NIES4071_03490 PF01370 NAD dependent epimerase/dehydratase family NIES4071_03500 PF03551 Transcriptional regulator PadR-like family NIES4071_03500 PF10400 Virulence activator alpha C-term NIES4071_03520 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_03520 PF00563 EAL domain NIES4071_03520 PF01590 GAF domain NIES4071_03520 PF00360 Phytochrome region NIES4071_03710 PF00440 Bacterial regulatory proteins, tetR family NIES4071_03730 PF01594 AI-2E family transporter NIES4071_03780 PF04072 Leucine carboxyl methyltransferase NIES4071_03870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIES4071_03870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIES4071_03880 PF00561 alpha/beta hydrolase fold NIES4071_03950 PF00400 WD domain, G-beta repeat NIES4071_03950 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_04000 PF00140 Sigma-70 factor, region 1.2 NIES4071_04000 PF04542 Sigma-70 region 2 NIES4071_04000 PF04539 Sigma-70 region 3 NIES4071_04000 PF04545 Sigma-70, region 4 NIES4071_04070 PF00072 Response regulator receiver domain NIES4071_04070 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_04080 PF00400 WD domain, G-beta repeat NIES4071_04100 PF00300 Histidine phosphatase superfamily (branch 1) NIES4071_04110 PF08544 GHMP kinases C terminal NIES4071_04110 PF00288 GHMP kinases N terminal domain NIES4071_04130 PF00069 Protein kinase domain NIES4071_04130 PF03793 PASTA domain NIES4071_04140 PF00989 PAS fold NIES4071_04140 PF16736 Single Cache-like NIES4071_04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_04140 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_04190 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_04200 PF00909 Ammonium Transporter Family NIES4071_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_04260 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_04280 PF03793 PASTA domain NIES4071_04280 PF00069 Protein kinase domain NIES4071_04290 PF01627 Hpt domain NIES4071_04290 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_04290 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_04290 PF00072 Response regulator receiver domain NIES4071_04290 PF00989 PAS fold NIES4071_04300 PF00072 Response regulator receiver domain NIES4071_04370 PF02416 mttA/Hcf106 family NIES4071_04380 PF00737 Photosystem II 10 kDa phosphoprotein NIES4071_04390 PF02468 Photosystem II reaction centre N protein (psbN) NIES4071_04410 PF00005 ABC transporter NIES4071_04410 PF00664 ABC transporter transmembrane region NIES4071_04460 PF00175 Oxidoreductase NAD-binding domain NIES4071_04460 PF00258 Flavodoxin NIES4071_04460 PF00667 FAD binding domain NIES4071_04460 PF00067 Cytochrome P450 NIES4071_04540 PF00196 Bacterial regulatory proteins, luxR family NIES4071_04540 PF00072 Response regulator receiver domain NIES4071_04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_04590 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_04590 PF01627 Hpt domain NIES4071_04590 PF00989 PAS fold NIES4071_04590 PF00072 Response regulator receiver domain NIES4071_04590 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_04660 PF03992 Antibiotic biosynthesis monooxygenase NIES4071_04670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES4071_04670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES4071_04780 PF00271 Helicase conserved C-terminal domain NIES4071_04780 PF09369 Domain of unknown function (DUF1998) NIES4071_04780 PF00270 DEAD/DEAH box helicase NIES4071_04830 PF00150 Cellulase (glycosyl hydrolase family 5) NIES4071_04850 PF14251 Domain of unknown function (DUF4346) NIES4071_04890 PF00563 EAL domain NIES4071_04890 PF01590 GAF domain NIES4071_04890 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_04890 PF00360 Phytochrome region NIES4071_04900 PF00258 Flavodoxin NIES4071_04910 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NIES4071_04920 PF00707 Translation initiation factor IF-3, C-terminal domain NIES4071_04920 PF05198 Translation initiation factor IF-3, N-terminal domain NIES4071_04930 PF00814 Glycoprotease family NIES4071_04960 PF00069 Protein kinase domain NIES4071_04960 PF00805 Pentapeptide repeats (8 copies) NIES4071_04970 PF00202 Aminotransferase class-III NIES4071_05050 PF00009 Elongation factor Tu GTP binding domain NIES4071_05050 PF03764 Elongation factor G, domain IV NIES4071_05050 PF14492 Elongation Factor G, domain II NIES4071_05050 PF00679 Elongation factor G C-terminus NIES4071_05070 PF05532 CsbD-like NIES4071_05130 PF01047 MarR family NIES4071_05150 PF00005 ABC transporter NIES4071_05150 PF13732 Domain of unknown function (DUF4162) NIES4071_05240 PF00400 WD domain, G-beta repeat NIES4071_05240 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_05290 PF00950 ABC 3 transport family NIES4071_05350 PF09154 Domain of unknown function (DUF1939) NIES4071_05350 PF00128 Alpha amylase, catalytic domain NIES4071_05360 PF01223 DNA/RNA non-specific endonuclease NIES4071_05380 PF00082 Subtilase family NIES4071_05450 PF01223 DNA/RNA non-specific endonuclease NIES4071_05460 PF00082 Subtilase family NIES4071_05460 PF05922 Peptidase inhibitor I9 NIES4071_05480 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_05480 PF00400 WD domain, G-beta repeat NIES4071_05490 PF05199 GMC oxidoreductase NIES4071_05490 PF00732 GMC oxidoreductase NIES4071_05520 PF00128 Alpha amylase, catalytic domain NIES4071_05520 PF02806 Alpha amylase, C-terminal all-beta domain NIES4071_05520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIES4071_05820 PF00400 WD domain, G-beta repeat NIES4071_05880 PF00400 WD domain, G-beta repeat NIES4071_05940 PF00400 WD domain, G-beta repeat NIES4071_06000 PF00400 WD domain, G-beta repeat NIES4071_06070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_06070 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_06090 PF00501 AMP-binding enzyme NIES4071_06100 PF13181 Tetratricopeptide repeat NIES4071_06130 PF02797 Chalcone and stilbene synthases, C-terminal domain NIES4071_06130 PF00195 Chalcone and stilbene synthases, N-terminal domain NIES4071_06140 PF14765 Polyketide synthase dehydratase NIES4071_06140 PF08659 KR domain NIES4071_06140 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_06140 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_06140 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_06140 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_06140 PF00698 Acyl transferase domain NIES4071_06140 PF00550 Phosphopantetheine attachment site NIES4071_06150 PF00698 Acyl transferase domain NIES4071_06150 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_06150 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_06150 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_06150 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_06150 PF08659 KR domain NIES4071_06150 PF14765 Polyketide synthase dehydratase NIES4071_06150 PF00550 Phosphopantetheine attachment site NIES4071_06190 PF06965 Na+/H+ antiporter 1 NIES4071_06190 PF13462 Thioredoxin NIES4071_06230 PF01965 DJ-1/PfpI family NIES4071_06230 PF12833 Helix-turn-helix domain NIES4071_06250 PF13180 PDZ domain NIES4071_06270 PF00400 WD domain, G-beta repeat NIES4071_06450 PF00400 WD domain, G-beta repeat NIES4071_06460 PF00400 WD domain, G-beta repeat NIES4071_06480 PF00400 WD domain, G-beta repeat NIES4071_06490 PF13180 PDZ domain NIES4071_06500 PF00400 WD domain, G-beta repeat NIES4071_06530 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NIES4071_06530 PF00326 Prolyl oligopeptidase family NIES4071_06690 PF03793 PASTA domain NIES4071_06690 PF00069 Protein kinase domain NIES4071_06890 PF05199 GMC oxidoreductase NIES4071_06890 PF00732 GMC oxidoreductase NIES4071_06900 PF12833 Helix-turn-helix domain NIES4071_06900 PF02311 AraC-like ligand binding domain NIES4071_06910 PF12833 Helix-turn-helix domain NIES4071_06910 PF12852 Cupin NIES4071_06930 PF00931 NB-ARC domain NIES4071_06930 PF00400 WD domain, G-beta repeat NIES4071_06940 PF06965 Na+/H+ antiporter 1 NIES4071_06940 PF13462 Thioredoxin NIES4071_06980 PF02525 Flavodoxin-like fold NIES4071_07030 PF01638 HxlR-like helix-turn-helix NIES4071_07040 PF08659 KR domain NIES4071_07040 PF00698 Acyl transferase domain NIES4071_07040 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_07040 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_07040 PF14765 Polyketide synthase dehydratase NIES4071_07040 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_07040 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_07040 PF00550 Phosphopantetheine attachment site NIES4071_07050 PF12146 Serine aminopeptidase, S33 NIES4071_07060 PF00732 GMC oxidoreductase NIES4071_07060 PF05199 GMC oxidoreductase NIES4071_07080 PF08031 Berberine and berberine like NIES4071_07080 PF01565 FAD binding domain NIES4071_07090 PF01494 FAD binding domain NIES4071_07110 PF00561 alpha/beta hydrolase fold NIES4071_07120 PF16123 Hydroxyacylglutathione hydrolase C-terminus NIES4071_07120 PF00753 Metallo-beta-lactamase superfamily NIES4071_07380 PF01850 PIN domain NIES4071_07470 PF00205 Thiamine pyrophosphate enzyme, central domain NIES4071_07470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES4071_07470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_07480 PF01593 Flavin containing amine oxidoreductase NIES4071_07490 PF01593 Flavin containing amine oxidoreductase NIES4071_07500 PF00550 Phosphopantetheine attachment site NIES4071_07500 PF07993 Male sterility protein NIES4071_07500 PF00668 Condensation domain NIES4071_07500 PF13193 AMP-binding enzyme C-terminal domain NIES4071_07500 PF00501 AMP-binding enzyme NIES4071_07510 PF00668 Condensation domain NIES4071_07510 PF13193 AMP-binding enzyme C-terminal domain NIES4071_07510 PF00501 AMP-binding enzyme NIES4071_07510 PF00550 Phosphopantetheine attachment site NIES4071_07520 PF13649 Methyltransferase domain NIES4071_07580 PF00005 ABC transporter NIES4071_07580 PF00664 ABC transporter transmembrane region NIES4071_07580 PF03412 Peptidase C39 family NIES4071_07610 PF03412 Peptidase C39 family NIES4071_07610 PF00005 ABC transporter NIES4071_07610 PF00664 ABC transporter transmembrane region NIES4071_07650 PF01584 CheW-like domain NIES4071_07660 PF01739 CheR methyltransferase, SAM binding domain NIES4071_07670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_07670 PF00672 HAMP domain NIES4071_07670 PF02743 Cache domain NIES4071_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_07690 PF01584 CheW-like domain NIES4071_07690 PF01627 Hpt domain NIES4071_07690 PF00072 Response regulator receiver domain NIES4071_07700 PF01339 CheB methylesterase NIES4071_07700 PF00072 Response regulator receiver domain NIES4071_07710 PF00072 Response regulator receiver domain NIES4071_07710 PF08769 Sporulation initiation factor Spo0A C terminal NIES4071_07750 PF01266 FAD dependent oxidoreductase NIES4071_07780 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_07780 PF00400 WD domain, G-beta repeat NIES4071_07880 PF00589 Phage integrase family NIES4071_07880 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_07990 PF07697 7TM-HD extracellular NIES4071_07990 PF01966 HD domain NIES4071_07990 PF07698 7TM receptor with intracellular HD hydrolase NIES4071_08000 PF05239 PRC-barrel domain NIES4071_08000 PF09557 Domain of unknown function (DUF2382) NIES4071_08030 PF07486 Cell Wall Hydrolase NIES4071_08030 PF01471 Putative peptidoglycan binding domain NIES4071_08050 PF12794 Mechanosensitive ion channel inner membrane domain 1 NIES4071_08050 PF12795 Mechanosensitive ion channel porin domain NIES4071_08050 PF00924 Mechanosensitive ion channel NIES4071_08060 PF00072 Response regulator receiver domain NIES4071_08060 PF00486 Transcriptional regulatory protein, C terminal NIES4071_08070 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_08070 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_08070 PF00072 Response regulator receiver domain NIES4071_08080 PF01627 Hpt domain NIES4071_08080 PF00486 Transcriptional regulatory protein, C terminal NIES4071_08080 PF00072 Response regulator receiver domain NIES4071_08140 PF13180 PDZ domain NIES4071_08150 PF13181 Tetratricopeptide repeat NIES4071_08150 PF01435 Peptidase family M48 NIES4071_08170 PF02469 Fasciclin domain NIES4071_08190 PF00924 Mechanosensitive ion channel NIES4071_08190 PF05552 Conserved TM helix NIES4071_08200 PF10011 Predicted membrane protein (DUF2254) NIES4071_08210 PF01594 AI-2E family transporter NIES4071_08280 PF13180 PDZ domain NIES4071_08300 PF10518 TAT (twin-arginine translocation) pathway signal sequence NIES4071_08300 PF00149 Calcineurin-like phosphoesterase NIES4071_08310 PF00144 Beta-lactamase NIES4071_08460 PF00535 Glycosyl transferase family 2 NIES4071_08470 PF08323 Starch synthase catalytic domain NIES4071_08470 PF00534 Glycosyl transferases group 1 NIES4071_08480 PF01943 Polysaccharide biosynthesis protein NIES4071_08490 PF00535 Glycosyl transferase family 2 NIES4071_08500 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NIES4071_08500 PF00535 Glycosyl transferase family 2 NIES4071_08510 PF00535 Glycosyl transferase family 2 NIES4071_08520 PF01593 Flavin containing amine oxidoreductase NIES4071_08550 PF00723 Glycosyl hydrolases family 15 NIES4071_08550 PF09137 Glucodextranase, domain N NIES4071_08570 PF00296 Luciferase-like monooxygenase NIES4071_08590 PF00999 Sodium/hydrogen exchanger family NIES4071_08600 PF00999 Sodium/hydrogen exchanger family NIES4071_08670 PF00175 Oxidoreductase NAD-binding domain NIES4071_08670 PF00970 Oxidoreductase FAD-binding domain NIES4071_08670 PF00042 Globin NIES4071_08680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES4071_08680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES4071_08690 PF00689 Cation transporting ATPase, C-terminus NIES4071_08690 PF00690 Cation transporter/ATPase, N-terminus NIES4071_08700 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_08700 PF18719 ArlS sensor domain NIES4071_08720 PF01627 Hpt domain NIES4071_08720 PF00072 Response regulator receiver domain NIES4071_08720 PF00486 Transcriptional regulatory protein, C terminal NIES4071_08730 PF00571 CBS domain NIES4071_08730 PF01595 Cyclin M transmembrane N-terminal domain NIES4071_08730 PF03471 Transporter associated domain NIES4071_08740 PF00989 PAS fold NIES4071_08740 PF11808 Phosphate regulon sensor protein PhoR NIES4071_08740 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_08750 PF01627 Hpt domain NIES4071_08750 PF00486 Transcriptional regulatory protein, C terminal NIES4071_08750 PF00072 Response regulator receiver domain NIES4071_08830 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NIES4071_08860 PF00188 Cysteine-rich secretory protein family NIES4071_08870 PF01036 Bacteriorhodopsin-like protein NIES4071_08880 PF07995 Glucose / Sorbosone dehydrogenase NIES4071_09010 PF00815 Histidinol dehydrogenase NIES4071_09020 PF00815 Histidinol dehydrogenase NIES4071_09030 PF13533 Biotin-lipoyl like NIES4071_09050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_09050 PF01348 Type II intron maturase NIES4071_09070 PF00589 Phage integrase family NIES4071_09070 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_09120 PF00400 WD domain, G-beta repeat NIES4071_09120 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_09140 PF00400 WD domain, G-beta repeat NIES4071_09140 PF00931 NB-ARC domain NIES4071_09150 PF01032 FecCD transport family NIES4071_09210 PF00296 Luciferase-like monooxygenase NIES4071_09220 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NIES4071_09230 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_09240 PF00753 Metallo-beta-lactamase superfamily NIES4071_09250 PF00581 Rhodanese-like domain NIES4071_09250 PF11127 Protein of unknown function (DUF2892) NIES4071_09280 PF17845 FbpC C-terminal regulatory nucleotide binding domain NIES4071_09280 PF00005 ABC transporter NIES4071_09320 PF03459 TOBE domain NIES4071_09340 PF00534 Glycosyl transferases group 1 NIES4071_09340 PF00862 Sucrose synthase NIES4071_09350 PF00128 Alpha amylase, catalytic domain NIES4071_09370 PF00072 Response regulator receiver domain NIES4071_09370 PF00196 Bacterial regulatory proteins, luxR family NIES4071_09380 PF07730 Histidine kinase NIES4071_09390 PF13545 Crp-like helix-turn-helix domain NIES4071_09390 PF00027 Cyclic nucleotide-binding domain NIES4071_09440 PF00970 Oxidoreductase FAD-binding domain NIES4071_09440 PF00175 Oxidoreductase NAD-binding domain NIES4071_09440 PF00042 Globin NIES4071_09450 PF10017 Histidine-specific methyltransferase, SAM-dependent NIES4071_09480 PF04545 Sigma-70, region 4 NIES4071_09480 PF04539 Sigma-70 region 3 NIES4071_09480 PF00140 Sigma-70 factor, region 1.2 NIES4071_09480 PF04542 Sigma-70 region 2 NIES4071_09490 PF03552 Cellulose synthase NIES4071_09490 PF07238 PilZ domain NIES4071_09490 PF00535 Glycosyl transferase family 2 NIES4071_09550 PF01641 SelR domain NIES4071_09560 PF01227 GTP cyclohydrolase I NIES4071_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_09590 PF00378 Enoyl-CoA hydratase/isomerase NIES4071_09610 PF01761 3-dehydroquinate synthase NIES4071_09620 PF00072 Response regulator receiver domain NIES4071_09620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_09620 PF01627 Hpt domain NIES4071_09620 PF00672 HAMP domain NIES4071_09620 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_09630 PF00072 Response regulator receiver domain NIES4071_09660 PF00072 Response regulator receiver domain NIES4071_09660 PF00486 Transcriptional regulatory protein, C terminal NIES4071_09670 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_09670 PF00672 HAMP domain NIES4071_09730 PF01565 FAD binding domain NIES4071_09730 PF02913 FAD linked oxidases, C-terminal domain NIES4071_09740 PF01872 RibD C-terminal domain NIES4071_09790 PF00472 RF-1 domain NIES4071_09830 PF13180 PDZ domain NIES4071_09930 PF00950 ABC 3 transport family NIES4071_09940 PF00005 ABC transporter NIES4071_09950 PF01297 Zinc-uptake complex component A periplasmic NIES4071_09960 PF00581 Rhodanese-like domain NIES4071_09960 PF00899 ThiF family NIES4071_10000 PF00582 Universal stress protein family NIES4071_100020 PF06745 KaiC NIES4071_100040 PF07688 KaiA C-terminal domain NIES4071_100050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_100050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_100060 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NIES4071_100070 PF04255 Protein of unknown function (DUF433) NIES4071_10010 PF00486 Transcriptional regulatory protein, C terminal NIES4071_10010 PF00072 Response regulator receiver domain NIES4071_10010 PF01627 Hpt domain NIES4071_100120 PF00580 UvrD/REP helicase N-terminal domain NIES4071_100120 PF13361 UvrD-like helicase C-terminal domain NIES4071_100170 PF17761 DUF1016 N-terminal domain NIES4071_100170 PF06250 YhcG PDDEXK nuclease domain NIES4071_100190 PF13519 von Willebrand factor type A domain NIES4071_100190 PF01078 Magnesium chelatase, subunit ChlI NIES4071_100190 PF17863 AAA lid domain NIES4071_100200 PF17863 AAA lid domain NIES4071_100200 PF01078 Magnesium chelatase, subunit ChlI NIES4071_100220 PF00248 Aldo/keto reductase family NIES4071_100240 PF03600 Citrate transporter NIES4071_100250 PF00005 ABC transporter NIES4071_100260 PF00005 ABC transporter NIES4071_100270 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_100280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_100280 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_100280 PF01627 Hpt domain NIES4071_100280 PF00072 Response regulator receiver domain NIES4071_100280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_100280 PF00672 HAMP domain NIES4071_100290 PF00881 Nitroreductase family NIES4071_100330 PF00585 C-terminal regulatory domain of Threonine dehydratase NIES4071_100330 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_100370 PF01494 FAD binding domain NIES4071_100410 PF09334 tRNA synthetases class I (M) NIES4071_100410 PF13603 Leucyl-tRNA synthetase, Domain 2 NIES4071_100410 PF08264 Anticodon-binding domain of tRNA NIES4071_100410 PF00133 tRNA synthetases class I (I, L, M and V) NIES4071_100420 PF02579 Dinitrogenase iron-molybdenum cofactor NIES4071_100430 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NIES4071_100450 PF04542 Sigma-70 region 2 NIES4071_100450 PF08281 Sigma-70, region 4 NIES4071_100470 PF17969 L,D-transpeptidase C-terminal domain NIES4071_100470 PF03734 L,D-transpeptidase catalytic domain NIES4071_100490 PF01551 Peptidase family M23 NIES4071_100490 PF01476 LysM domain NIES4071_100490 PF08525 Opacity-associated protein A N-terminal motif NIES4071_100500 PF02687 FtsX-like permease family NIES4071_100500 PF12704 MacB-like periplasmic core domain NIES4071_100500 PF00005 ABC transporter NIES4071_100530 PF00440 Bacterial regulatory proteins, tetR family NIES4071_100550 PF00999 Sodium/hydrogen exchanger family NIES4071_100550 PF02254 TrkA-N domain NIES4071_100570 PF01678 Diaminopimelate epimerase NIES4071_100630 PF14332 Domain of unknown function (DUF4388) NIES4071_100630 PF00072 Response regulator receiver domain NIES4071_100640 PF00072 Response regulator receiver domain NIES4071_100640 PF00486 Transcriptional regulatory protein, C terminal NIES4071_100660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_100660 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NIES4071_100690 PF03239 Iron permease FTR1 family NIES4071_10070 PF00069 Protein kinase domain NIES4071_10070 PF03793 PASTA domain NIES4071_100730 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_100730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_100730 PF16736 Single Cache-like NIES4071_100730 PF00989 PAS fold NIES4071_100760 PF00403 Heavy-metal-associated domain NIES4071_100770 PF00578 AhpC/TSA family NIES4071_100770 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIES4071_100800 PF00753 Metallo-beta-lactamase superfamily NIES4071_100870 PF04539 Sigma-70 region 3 NIES4071_100870 PF04545 Sigma-70, region 4 NIES4071_100870 PF00140 Sigma-70 factor, region 1.2 NIES4071_100870 PF04542 Sigma-70 region 2 NIES4071_100880 PF00916 Sulfate permease family NIES4071_100880 PF01740 STAS domain NIES4071_100890 PF02698 DUF218 domain NIES4071_10090 PF00069 Protein kinase domain NIES4071_10090 PF03793 PASTA domain NIES4071_100900 PF00873 AcrB/AcrD/AcrF family NIES4071_100940 PF07884 Vitamin K epoxide reductase family NIES4071_100980 PF01545 Cation efflux family NIES4071_101010 PF01566 Natural resistance-associated macrophage protein NIES4071_101020 PF01566 Natural resistance-associated macrophage protein NIES4071_101030 PF02553 Cobalt transport protein component CbiN NIES4071_101050 PF01545 Cation efflux family NIES4071_101050 PF16916 Dimerisation domain of Zinc Transporter NIES4071_101060 PF01022 Bacterial regulatory protein, arsR family NIES4071_101070 PF00403 Heavy-metal-associated domain NIES4071_101130 PF08267 Cobalamin-independent synthase, N-terminal domain NIES4071_101130 PF01717 Cobalamin-independent synthase, Catalytic domain NIES4071_101150 PF02867 Ribonucleotide reductase, barrel domain NIES4071_101150 PF00317 Ribonucleotide reductase, all-alpha domain NIES4071_101150 PF03477 ATP cone domain NIES4071_101160 PF00268 Ribonucleotide reductase, small chain NIES4071_101170 PF14251 Domain of unknown function (DUF4346) NIES4071_101180 PF00005 ABC transporter NIES4071_101190 PF01032 FecCD transport family NIES4071_101200 PF01497 Periplasmic binding protein NIES4071_101210 PF07715 TonB-dependent Receptor Plug Domain NIES4071_101210 PF00593 TonB dependent receptor NIES4071_101250 PF00355 Rieske [2Fe-2S] domain NIES4071_101270 PF01717 Cobalamin-independent synthase, Catalytic domain NIES4071_101270 PF08267 Cobalamin-independent synthase, N-terminal domain NIES4071_101300 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES4071_101300 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_101310 PF07715 TonB-dependent Receptor Plug Domain NIES4071_101310 PF00593 TonB dependent receptor NIES4071_101330 PF01497 Periplasmic binding protein NIES4071_101340 PF01032 FecCD transport family NIES4071_101410 PF00005 ABC transporter NIES4071_101410 PF00664 ABC transporter transmembrane region NIES4071_101410 PF03412 Peptidase C39 family NIES4071_101460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NIES4071_101460 PF17287 POTRA domain NIES4071_101460 PF08479 POTRA domain, ShlB-type NIES4071_101530 PF13154 Protein of unknown function (DUF3991) NIES4071_101530 PF01076 Plasmid recombination enzyme NIES4071_101620 PF00145 C-5 cytosine-specific DNA methylase NIES4071_101660 PF03358 NADPH-dependent FMN reductase NIES4071_101680 PF12849 PBP superfamily domain NIES4071_101690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIES4071_101690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIES4071_101720 PF00230 Major intrinsic protein NIES4071_101740 PF07690 Major Facilitator Superfamily NIES4071_101750 PF01451 Low molecular weight phosphotyrosine protein phosphatase NIES4071_101760 PF01758 Sodium Bile acid symporter family NIES4071_101770 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_101770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_101780 PF01758 Sodium Bile acid symporter family NIES4071_101790 PF12849 PBP superfamily domain NIES4071_101800 PF01022 Bacterial regulatory protein, arsR family NIES4071_101810 PF01022 Bacterial regulatory protein, arsR family NIES4071_101820 PF13847 Methyltransferase domain NIES4071_101830 PF01022 Bacterial regulatory protein, arsR family NIES4071_101890 PF00563 EAL domain NIES4071_101890 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_101890 PF03707 Bacterial signalling protein N terminal repeat NIES4071_102140 PF12169 DNA polymerase III subunits gamma and tau domain III NIES4071_10220 PF01738 Dienelactone hydrolase family NIES4071_102210 PF00270 DEAD/DEAH box helicase NIES4071_102210 PF00271 Helicase conserved C-terminal domain NIES4071_102210 PF09369 Domain of unknown function (DUF1998) NIES4071_102400 PF01434 Peptidase family M41 NIES4071_102400 PF06480 FtsH Extracellular NIES4071_102400 PF17862 AAA+ lid domain NIES4071_102400 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_102530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES4071_102620 PF00176 SNF2 family N-terminal domain NIES4071_102620 PF00271 Helicase conserved C-terminal domain NIES4071_10290 PF00578 AhpC/TSA family NIES4071_103050 PF00012 Hsp70 protein NIES4071_10310 PF01266 FAD dependent oxidoreductase NIES4071_103330 PF01551 Peptidase family M23 NIES4071_103330 PF04225 Opacity-associated protein A LysM-like domain NIES4071_103350 PF17854 FtsK alpha domain NIES4071_103350 PF01580 FtsK/SpoIIIE family NIES4071_10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_10340 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_10340 PF00989 PAS fold NIES4071_103520 PF00196 Bacterial regulatory proteins, luxR family NIES4071_103520 PF00072 Response regulator receiver domain NIES4071_103530 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_103530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_103590 PF01076 Plasmid recombination enzyme NIES4071_103590 PF13154 Protein of unknown function (DUF3991) NIES4071_10370 PF00582 Universal stress protein family NIES4071_103700 PF02195 ParB-like nuclease domain NIES4071_103710 PF13614 AAA domain NIES4071_103730 PF00436 Single-strand binding protein family NIES4071_103780 PF02768 DNA polymerase III beta subunit, C-terminal domain NIES4071_103780 PF00712 DNA polymerase III beta subunit, N-terminal domain NIES4071_103780 PF02767 DNA polymerase III beta subunit, central domain NIES4071_10390 PF00005 ABC transporter NIES4071_104030 PF12965 Domain of unknown function (DUF3854) NIES4071_104180 PF02824 TGS domain NIES4071_104180 PF04607 Region found in RelA / SpoT proteins NIES4071_104180 PF13291 ACT domain NIES4071_10420 PF01145 SPFH domain / Band 7 family NIES4071_104270 PF13545 Crp-like helix-turn-helix domain NIES4071_104280 PF02082 Transcriptional regulator NIES4071_104290 PF01209 ubiE/COQ5 methyltransferase family NIES4071_10430 PF00809 Pterin binding enzyme NIES4071_104330 PF00403 Heavy-metal-associated domain NIES4071_104350 PF13411 MerR HTH family regulatory protein NIES4071_104380 PF13411 MerR HTH family regulatory protein NIES4071_104400 PF00395 S-layer homology domain NIES4071_104400 PF04966 Carbohydrate-selective porin, OprB family NIES4071_104410 PF13411 MerR HTH family regulatory protein NIES4071_104430 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_104430 PF11808 Phosphate regulon sensor protein PhoR NIES4071_104430 PF00989 PAS fold NIES4071_104430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_104440 PF00486 Transcriptional regulatory protein, C terminal NIES4071_104440 PF00072 Response regulator receiver domain NIES4071_104450 PF00689 Cation transporting ATPase, C-terminus NIES4071_104450 PF00690 Cation transporter/ATPase, N-terminus NIES4071_104510 PF01545 Cation efflux family NIES4071_104510 PF16916 Dimerisation domain of Zinc Transporter NIES4071_104530 PF00873 AcrB/AcrD/AcrF family NIES4071_104550 PF00403 Heavy-metal-associated domain NIES4071_104560 PF01545 Cation efflux family NIES4071_104580 PF01022 Bacterial regulatory protein, arsR family NIES4071_104590 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_104600 PF07884 Vitamin K epoxide reductase family NIES4071_10470 PF05552 Conserved TM helix NIES4071_10490 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES4071_10490 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_10500 PF13180 PDZ domain NIES4071_105020 PF01209 ubiE/COQ5 methyltransferase family NIES4071_10510 PF04389 Peptidase family M28 NIES4071_10510 PF02225 PA domain NIES4071_105130 PF14622 Ribonuclease-III-like NIES4071_105130 PF00035 Double-stranded RNA binding motif NIES4071_10520 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_10520 PF16736 Single Cache-like NIES4071_10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_10520 PF00989 PAS fold NIES4071_105210 PF00176 SNF2 family N-terminal domain NIES4071_105210 PF00271 Helicase conserved C-terminal domain NIES4071_105370 PF05257 CHAP domain NIES4071_105370 PF01476 LysM domain NIES4071_105390 PF01596 O-methyltransferase NIES4071_105440 PF00270 DEAD/DEAH box helicase NIES4071_105440 PF09382 RQC domain NIES4071_105440 PF16124 RecQ zinc-binding NIES4071_105440 PF00570 HRDC domain NIES4071_105440 PF00271 Helicase conserved C-terminal domain NIES4071_105470 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NIES4071_105610 PF12965 Domain of unknown function (DUF3854) NIES4071_105890 PF00893 Small Multidrug Resistance protein NIES4071_105930 PF00355 Rieske [2Fe-2S] domain NIES4071_105930 PF01266 FAD dependent oxidoreductase NIES4071_10600 PF00072 Response regulator receiver domain NIES4071_106020 PF00565 Staphylococcal nuclease homologue NIES4071_10610 PF00072 Response regulator receiver domain NIES4071_10610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_10610 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_10610 PF01627 Hpt domain NIES4071_106160 PF00805 Pentapeptide repeats (8 copies) NIES4071_106160 PF00069 Protein kinase domain NIES4071_10630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_106360 PF00271 Helicase conserved C-terminal domain NIES4071_106360 PF04851 Type III restriction enzyme, res subunit NIES4071_106430 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_106430 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NIES4071_106430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NIES4071_106470 PF00145 C-5 cytosine-specific DNA methylase NIES4071_106550 PF13614 AAA domain NIES4071_10660 PF00486 Transcriptional regulatory protein, C terminal NIES4071_10660 PF00072 Response regulator receiver domain NIES4071_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_10670 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_106740 PF00005 ABC transporter NIES4071_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_10680 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_10680 PF16736 Single Cache-like NIES4071_10680 PF00989 PAS fold NIES4071_106960 PF00561 alpha/beta hydrolase fold NIES4071_106980 PF00589 Phage integrase family NIES4071_106980 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_107020 PF02463 RecF/RecN/SMC N terminal domain NIES4071_107040 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_107040 PF00589 Phage integrase family NIES4071_107090 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_10710 PF00753 Metallo-beta-lactamase superfamily NIES4071_107100 PF00589 Phage integrase family NIES4071_107100 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_107130 PF00589 Phage integrase family NIES4071_107130 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_107140 PF00589 Phage integrase family NIES4071_107140 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_107150 PF00589 Phage integrase family NIES4071_107150 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_107170 PF01758 Sodium Bile acid symporter family NIES4071_10720 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_10730 PF01047 MarR family NIES4071_107330 PF01076 Plasmid recombination enzyme NIES4071_107330 PF13154 Protein of unknown function (DUF3991) NIES4071_107340 PF13538 UvrD-like helicase C-terminal domain NIES4071_107340 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NIES4071_107340 PF14490 Helix-hairpin-helix containing domain NIES4071_107350 PF14490 Helix-hairpin-helix containing domain NIES4071_107350 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NIES4071_107350 PF13538 UvrD-like helicase C-terminal domain NIES4071_107430 PF00772 DnaB-like helicase N terminal domain NIES4071_107430 PF14528 LAGLIDADG-like domain NIES4071_107430 PF03796 DnaB-like helicase C terminal domain NIES4071_107460 PF05419 GUN4-like NIES4071_107460 PF16416 ARM-like repeat domain, GUN4-N terminal NIES4071_107540 PF00124 Photosynthetic reaction centre protein NIES4071_10760 PF04539 Sigma-70 region 3 NIES4071_10760 PF04542 Sigma-70 region 2 NIES4071_10760 PF00140 Sigma-70 factor, region 1.2 NIES4071_10760 PF04545 Sigma-70, region 4 NIES4071_107780 PF07444 Ycf66 protein N-terminus NIES4071_10780 PF00085 Thioredoxin NIES4071_10790 PF00005 ABC transporter NIES4071_10790 PF09383 NIL domain NIES4071_107930 PF05199 GMC oxidoreductase NIES4071_107930 PF00732 GMC oxidoreductase NIES4071_10800 PF01554 MatE NIES4071_10840 PF05235 CHAD domain NIES4071_10840 PF01928 CYTH domain NIES4071_108400 PF12965 Domain of unknown function (DUF3854) NIES4071_108520 PF08453 Peptidase family M9 N-terminal NIES4071_108520 PF01752 Collagenase NIES4071_108520 PF18496 Collagenase G catalytic helper subdomain NIES4071_108530 PF00535 Glycosyl transferase family 2 NIES4071_108550 PF00664 ABC transporter transmembrane region NIES4071_108550 PF03412 Peptidase C39 family NIES4071_108550 PF00005 ABC transporter NIES4071_108560 PF13533 Biotin-lipoyl like NIES4071_108600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_108610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_108610 PF01348 Type II intron maturase NIES4071_108630 PF01348 Type II intron maturase NIES4071_108630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_108640 PF01348 Type II intron maturase NIES4071_108640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_10870 PF17864 RuvB AAA lid domain NIES4071_10870 PF05496 Holliday junction DNA helicase RuvB P-loop domain NIES4071_10870 PF05491 RuvB C-terminal winged helix domain NIES4071_108740 PF01048 Phosphorylase superfamily NIES4071_108790 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_108790 PF00589 Phage integrase family NIES4071_108940 PF00665 Integrase core domain NIES4071_108950 PF13401 AAA domain NIES4071_108950 PF11426 Tn7 transposition regulator TnsC NIES4071_108960 PF06527 TniQ NIES4071_108960 PF15978 Tn7-like transposition protein D NIES4071_109110 PF03551 Transcriptional regulator PadR-like family NIES4071_109120 PF02195 ParB-like nuclease domain NIES4071_109180 PF02498 BRO family, N-terminal domain NIES4071_109180 PF10548 P22AR C-terminal domain NIES4071_109220 PF03412 Peptidase C39 family NIES4071_109220 PF00005 ABC transporter NIES4071_109220 PF00664 ABC transporter transmembrane region NIES4071_109250 PF05593 RHS Repeat NIES4071_109390 PF12965 Domain of unknown function (DUF3854) NIES4071_109410 PF15978 Tn7-like transposition protein D NIES4071_109410 PF06527 TniQ NIES4071_109420 PF11426 Tn7 transposition regulator TnsC NIES4071_109420 PF13401 AAA domain NIES4071_109430 PF00665 Integrase core domain NIES4071_109560 PF00589 Phage integrase family NIES4071_109560 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_10990 PF00563 EAL domain NIES4071_10990 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_10990 PF08448 PAS fold NIES4071_11000 PF00849 RNA pseudouridylate synthase NIES4071_11030 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NIES4071_11050 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_11070 PF00781 Diacylglycerol kinase catalytic domain NIES4071_11100 PF00793 DAHP synthetase I family NIES4071_11160 PF02633 Creatinine amidohydrolase NIES4071_11170 PF00480 ROK family NIES4071_11200 PF01850 PIN domain NIES4071_11280 PF13614 AAA domain NIES4071_11290 PF02195 ParB-like nuclease domain NIES4071_11320 PF00128 Alpha amylase, catalytic domain NIES4071_11320 PF09154 Domain of unknown function (DUF1939) NIES4071_11360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIES4071_11360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIES4071_11360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIES4071_11360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIES4071_11370 PF00145 C-5 cytosine-specific DNA methylase NIES4071_11410 PF01209 ubiE/COQ5 methyltransferase family NIES4071_11430 PF00072 Response regulator receiver domain NIES4071_11430 PF08769 Sporulation initiation factor Spo0A C terminal NIES4071_11450 PF03552 Cellulose synthase NIES4071_11450 PF03170 Bacterial cellulose synthase subunit NIES4071_11450 PF07238 PilZ domain NIES4071_11450 PF00535 Glycosyl transferase family 2 NIES4071_11490 PF03441 FAD binding domain of DNA photolyase NIES4071_11490 PF00875 DNA photolyase NIES4071_11520 PF03551 Transcriptional regulator PadR-like family NIES4071_11540 PF13188 PAS domain NIES4071_11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_11540 PF13426 PAS domain NIES4071_11540 PF00989 PAS fold NIES4071_11540 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_11550 PF00905 Penicillin binding protein transpeptidase domain NIES4071_11550 PF03717 Penicillin-binding Protein dimerisation domain NIES4071_11570 PF00578 AhpC/TSA family NIES4071_11570 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIES4071_11590 PF00072 Response regulator receiver domain NIES4071_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_11590 PF17149 Periplasmic sensor domain found in signal transduction proteins NIES4071_11590 PF00672 HAMP domain NIES4071_11590 PF01627 Hpt domain NIES4071_11590 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_11660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NIES4071_11660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIES4071_11670 PF00733 Asparagine synthase NIES4071_11670 PF13537 Glutamine amidotransferase domain NIES4071_11700 PF00733 Asparagine synthase NIES4071_11700 PF13537 Glutamine amidotransferase domain NIES4071_11710 PF02254 TrkA-N domain NIES4071_11710 PF00999 Sodium/hydrogen exchanger family NIES4071_11720 PF01494 FAD binding domain NIES4071_11750 PF00155 Aminotransferase class I and II NIES4071_11800 PF03466 LysR substrate binding domain NIES4071_11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_11810 PF00248 Aldo/keto reductase family NIES4071_11820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NIES4071_11820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NIES4071_11820 PF06827 Zinc finger found in FPG and IleRS NIES4071_11850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIES4071_11850 PF00005 ABC transporter NIES4071_11870 PF04607 Region found in RelA / SpoT proteins NIES4071_11870 PF02824 TGS domain NIES4071_11870 PF13291 ACT domain NIES4071_11880 PF02463 RecF/RecN/SMC N terminal domain NIES4071_11910 PF00293 NUDIX domain NIES4071_11920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_11930 PF00085 Thioredoxin NIES4071_11940 PF01022 Bacterial regulatory protein, arsR family NIES4071_11950 PF11965 Domain of unknown function (DUF3479) NIES4071_11950 PF02514 CobN/Magnesium Chelatase NIES4071_12030 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NIES4071_12050 PF00072 Response regulator receiver domain NIES4071_12050 PF00989 PAS fold NIES4071_12050 PF01627 Hpt domain NIES4071_12050 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_12050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_12070 PF13735 tRNA nucleotidyltransferase domain 2 putative NIES4071_12070 PF12627 Probable RNA and SrmB- binding site of polymerase A NIES4071_12070 PF01743 Poly A polymerase head domain NIES4071_12110 PF02086 D12 class N6 adenine-specific DNA methyltransferase NIES4071_12180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NIES4071_12190 PF01933 Uncharacterised protein family UPF0052 NIES4071_12200 PF02075 Crossover junction endodeoxyribonuclease RuvC NIES4071_12220 PF00072 Response regulator receiver domain NIES4071_12220 PF00486 Transcriptional regulatory protein, C terminal NIES4071_12270 PF13439 Glycosyltransferase Family 4 NIES4071_12290 PF00230 Major intrinsic protein NIES4071_12320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NIES4071_12320 PF00753 Metallo-beta-lactamase superfamily NIES4071_12320 PF10996 Beta-Casp domain NIES4071_12350 PF13439 Glycosyltransferase Family 4 NIES4071_12350 PF00534 Glycosyl transferases group 1 NIES4071_12360 PF13439 Glycosyltransferase Family 4 NIES4071_12360 PF00534 Glycosyl transferases group 1 NIES4071_12370 PF00535 Glycosyl transferase family 2 NIES4071_12410 PF01757 Acyltransferase family NIES4071_12420 PF05195 Aminopeptidase P, N-terminal domain NIES4071_12420 PF00557 Metallopeptidase family M24 NIES4071_12440 PF00005 ABC transporter NIES4071_12470 PF13180 PDZ domain NIES4071_12490 PF00675 Insulinase (Peptidase family M16) NIES4071_12490 PF05193 Peptidase M16 inactive domain NIES4071_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_12630 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_12630 PF13188 PAS domain NIES4071_12630 PF00072 Response regulator receiver domain NIES4071_12630 PF08448 PAS fold NIES4071_12670 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_12670 PF08448 PAS fold NIES4071_12700 PF09150 Orange carotenoid protein, N-terminal NIES4071_12730 PF01638 HxlR-like helix-turn-helix NIES4071_12740 PF13520 Amino acid permease NIES4071_12760 PF12697 Alpha/beta hydrolase family NIES4071_12770 PF00072 Response regulator receiver domain NIES4071_12770 PF17149 Periplasmic sensor domain found in signal transduction proteins NIES4071_12770 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_12770 PF00672 HAMP domain NIES4071_12770 PF01627 Hpt domain NIES4071_12780 PF01773 Na+ dependent nucleoside transporter N-terminus NIES4071_12780 PF07662 Na+ dependent nucleoside transporter C-terminus NIES4071_12780 PF07670 Nucleoside recognition NIES4071_12790 PF01926 50S ribosome-binding GTPase NIES4071_12850 PF07883 Cupin domain NIES4071_12870 PF01212 Beta-eliminating lyase NIES4071_12880 PF00072 Response regulator receiver domain NIES4071_12880 PF00196 Bacterial regulatory proteins, luxR family NIES4071_12890 PF00196 Bacterial regulatory proteins, luxR family NIES4071_12900 PF00082 Subtilase family NIES4071_12970 PF00196 Bacterial regulatory proteins, luxR family NIES4071_12970 PF03472 Autoinducer binding domain NIES4071_13010 PF00440 Bacterial regulatory proteins, tetR family NIES4071_13010 PF13977 BetI-type transcriptional repressor, C-terminal NIES4071_13020 PF12697 Alpha/beta hydrolase family NIES4071_13100 PF00005 ABC transporter NIES4071_13150 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_13150 PF00043 Glutathione S-transferase, C-terminal domain NIES4071_13160 PF00199 Catalase NIES4071_13170 PF07690 Major Facilitator Superfamily NIES4071_13230 PF13847 Methyltransferase domain NIES4071_13240 PF00486 Transcriptional regulatory protein, C terminal NIES4071_13240 PF00072 Response regulator receiver domain NIES4071_13360 PF12704 MacB-like periplasmic core domain NIES4071_13360 PF00005 ABC transporter NIES4071_13360 PF02687 FtsX-like permease family NIES4071_13380 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_13400 PF00204 DNA gyrase B NIES4071_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_13400 PF00986 DNA gyrase B subunit, carboxyl terminus NIES4071_13400 PF01751 Toprim domain NIES4071_13480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_13480 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NIES4071_13480 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NIES4071_13480 PF10371 Domain of unknown function NIES4071_13480 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NIES4071_13530 PF00005 ABC transporter NIES4071_13530 PF06472 ABC transporter transmembrane region 2 NIES4071_13540 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13540 PF00550 Phosphopantetheine attachment site NIES4071_13540 PF00501 AMP-binding enzyme NIES4071_13540 PF00668 Condensation domain NIES4071_13550 PF00501 AMP-binding enzyme NIES4071_13550 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13550 PF00668 Condensation domain NIES4071_13550 PF00550 Phosphopantetheine attachment site NIES4071_13550 PF07993 Male sterility protein NIES4071_13550 PF00550 Phosphopantetheine attachment site NIES4071_13550 PF07993 Male sterility protein NIES4071_13550 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13550 PF00668 Condensation domain NIES4071_13550 PF00501 AMP-binding enzyme NIES4071_13560 PF00501 AMP-binding enzyme NIES4071_13560 PF00550 Phosphopantetheine attachment site NIES4071_13560 PF00668 Condensation domain NIES4071_13560 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13570 PF00501 AMP-binding enzyme NIES4071_13570 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13570 PF00550 Phosphopantetheine attachment site NIES4071_13570 PF00668 Condensation domain NIES4071_13610 PF00501 AMP-binding enzyme NIES4071_13610 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13630 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13630 PF00550 Phosphopantetheine attachment site NIES4071_13630 PF00668 Condensation domain NIES4071_13630 PF00550 Phosphopantetheine attachment site NIES4071_13630 PF00501 AMP-binding enzyme NIES4071_13630 PF00501 AMP-binding enzyme NIES4071_13630 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13630 PF00668 Condensation domain NIES4071_13640 PF00550 Phosphopantetheine attachment site NIES4071_13640 PF00668 Condensation domain NIES4071_13640 PF13193 AMP-binding enzyme C-terminal domain NIES4071_13640 PF00501 AMP-binding enzyme NIES4071_13650 PF06472 ABC transporter transmembrane region 2 NIES4071_13650 PF00005 ABC transporter NIES4071_13690 PF06472 ABC transporter transmembrane region 2 NIES4071_13690 PF00005 ABC transporter NIES4071_13720 PF01177 Asp/Glu/Hydantoin racemase NIES4071_13730 PF07993 Male sterility protein NIES4071_13730 PF00550 Phosphopantetheine attachment site NIES4071_13760 PF00400 WD domain, G-beta repeat NIES4071_13820 PF00924 Mechanosensitive ion channel NIES4071_13860 PF08881 CVNH domain NIES4071_13930 PF00400 WD domain, G-beta repeat NIES4071_13950 PF00501 AMP-binding enzyme NIES4071_13980 PF17854 FtsK alpha domain NIES4071_13980 PF01580 FtsK/SpoIIIE family NIES4071_13990 PF17854 FtsK alpha domain NIES4071_13990 PF01580 FtsK/SpoIIIE family NIES4071_14240 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NIES4071_14240 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NIES4071_14240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_14240 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NIES4071_14240 PF10371 Domain of unknown function NIES4071_14250 PF01925 Sulfite exporter TauE/SafE NIES4071_14290 PF01679 Proteolipid membrane potential modulator NIES4071_14300 PF01253 Translation initiation factor SUI1 NIES4071_14310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NIES4071_14360 PF03819 MazG nucleotide pyrophosphohydrolase domain NIES4071_14370 PF03807 NADP oxidoreductase coenzyme F420-dependent NIES4071_14370 PF14748 Pyrroline-5-carboxylate reductase dimerisation NIES4071_14380 PF04472 Cell division protein SepF NIES4071_14390 PF01168 Alanine racemase, N-terminal domain NIES4071_14410 PF01648 4'-phosphopantetheinyl transferase superfamily NIES4071_14420 PF00425 chorismate binding enzyme NIES4071_14420 PF04715 Anthranilate synthase component I, N terminal region NIES4071_14430 PF00069 Protein kinase domain NIES4071_14430 PF13191 AAA ATPase domain NIES4071_14440 PF02361 Cobalt transport protein NIES4071_14450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIES4071_14450 PF01926 50S ribosome-binding GTPase NIES4071_14460 PF10518 TAT (twin-arginine translocation) pathway signal sequence NIES4071_14460 PF00149 Calcineurin-like phosphoesterase NIES4071_14500 PF12419 SNF2 Helicase protein NIES4071_14500 PF00176 SNF2 family N-terminal domain NIES4071_14500 PF00271 Helicase conserved C-terminal domain NIES4071_14550 PF06689 ClpX C4-type zinc finger NIES4071_14550 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_14550 PF07724 AAA domain (Cdc48 subfamily) NIES4071_14570 PF09308 LuxQ, periplasmic NIES4071_14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_14570 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_14570 PF00072 Response regulator receiver domain NIES4071_14590 PF00400 WD domain, G-beta repeat NIES4071_14600 PF00360 Phytochrome region NIES4071_14600 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_14600 PF01590 GAF domain NIES4071_14600 PF00563 EAL domain NIES4071_14620 PF17158 Membrane-associated sensor, integral membrane domain NIES4071_14620 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_14640 PF00817 impB/mucB/samB family NIES4071_14640 PF11799 impB/mucB/samB family C-terminal domain NIES4071_14650 PF04011 LemA family NIES4071_14660 PF01435 Peptidase family M48 NIES4071_14710 PF01223 DNA/RNA non-specific endonuclease NIES4071_14720 PF00664 ABC transporter transmembrane region NIES4071_14720 PF00005 ABC transporter NIES4071_14730 PF00440 Bacterial regulatory proteins, tetR family NIES4071_14730 PF18665 Tetracyclin repressor-like, C-terminal domain NIES4071_14750 PF00067 Cytochrome P450 NIES4071_14760 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_14760 PF08448 PAS fold NIES4071_14760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_14760 PF13426 PAS domain NIES4071_14760 PF00072 Response regulator receiver domain NIES4071_14770 PF04239 Protein of unknown function (DUF421) NIES4071_14780 PF00206 Lyase NIES4071_14780 PF10397 Adenylosuccinate lyase C-terminus NIES4071_14810 PF00762 Ferrochelatase NIES4071_14820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIES4071_14820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIES4071_14840 PF01618 MotA/TolQ/ExbB proton channel family NIES4071_14870 PF00210 Ferritin-like domain NIES4071_14910 PF02910 Fumarate reductase flavoprotein C-term NIES4071_14910 PF00890 FAD binding domain NIES4071_14940 PF13614 AAA domain NIES4071_14940 PF13807 G-rich domain on putative tyrosine kinase NIES4071_14940 PF02706 Chain length determinant protein NIES4071_14960 PF04932 O-Antigen ligase NIES4071_15000 PF01370 NAD dependent epimerase/dehydratase family NIES4071_15010 PF13439 Glycosyltransferase Family 4 NIES4071_15010 PF00534 Glycosyl transferases group 1 NIES4071_15030 PF14667 Polysaccharide biosynthesis C-terminal domain NIES4071_15030 PF01943 Polysaccharide biosynthesis protein NIES4071_15040 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES4071_15070 PF07664 Ferrous iron transport protein B C terminus NIES4071_15070 PF02421 Ferrous iron transport protein B NIES4071_15070 PF07670 Nucleoside recognition NIES4071_15090 PF03150 Di-haem cytochrome c peroxidase NIES4071_15090 PF00034 Cytochrome c NIES4071_15100 PF00905 Penicillin binding protein transpeptidase domain NIES4071_15100 PF03717 Penicillin-binding Protein dimerisation domain NIES4071_15120 PF13416 Bacterial extracellular solute-binding protein NIES4071_15130 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_15190 PF03109 ABC1 family NIES4071_15210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIES4071_15210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIES4071_15210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIES4071_15210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIES4071_15220 PF01126 Heme oxygenase NIES4071_15250 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_15270 PF01943 Polysaccharide biosynthesis protein NIES4071_15270 PF14667 Polysaccharide biosynthesis C-terminal domain NIES4071_15280 PF13439 Glycosyltransferase Family 4 NIES4071_15280 PF00534 Glycosyl transferases group 1 NIES4071_15290 PF13439 Glycosyltransferase Family 4 NIES4071_15290 PF00534 Glycosyl transferases group 1 NIES4071_15300 PF00535 Glycosyl transferase family 2 NIES4071_15310 PF00535 Glycosyl transferase family 2 NIES4071_15370 PF01522 Polysaccharide deacetylase NIES4071_15380 PF00535 Glycosyl transferase family 2 NIES4071_15390 PF00535 Glycosyl transferase family 2 NIES4071_15400 PF00535 Glycosyl transferase family 2 NIES4071_15410 PF01370 NAD dependent epimerase/dehydratase family NIES4071_15510 PF00005 ABC transporter NIES4071_15510 PF00571 CBS domain NIES4071_15580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIES4071_15580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NIES4071_15620 PF00085 Thioredoxin NIES4071_15640 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_15640 PF00571 CBS domain NIES4071_15660 PF17265 Family of unknown function (DUF5331) NIES4071_15670 PF04228 Putative neutral zinc metallopeptidase NIES4071_15720 PF01618 MotA/TolQ/ExbB proton channel family NIES4071_15750 PF00595 PDZ domain NIES4071_15750 PF03572 Peptidase family S41 NIES4071_15760 PF04551 GcpE protein NIES4071_15770 PF00781 Diacylglycerol kinase catalytic domain NIES4071_15790 PF00072 Response regulator receiver domain NIES4071_15790 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_15790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_15790 PF01627 Hpt domain NIES4071_15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_15790 PF00672 HAMP domain NIES4071_15810 PF00035 Double-stranded RNA binding motif NIES4071_15810 PF00636 Ribonuclease III domain NIES4071_15830 PF01544 CorA-like Mg2+ transporter protein NIES4071_15850 PF00953 Glycosyl transferase family 4 NIES4071_15870 PF13545 Crp-like helix-turn-helix domain NIES4071_15900 PF13230 Glutamine amidotransferases class-II NIES4071_15930 PF00875 DNA photolyase NIES4071_15930 PF03441 FAD binding domain of DNA photolyase NIES4071_15940 PF01594 AI-2E family transporter NIES4071_15960 PF00005 ABC transporter NIES4071_15990 PF01434 Peptidase family M41 NIES4071_15990 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_15990 PF17862 AAA+ lid domain NIES4071_16000 PF00248 Aldo/keto reductase family NIES4071_16110 PF00862 Sucrose synthase NIES4071_16110 PF00534 Glycosyl transferases group 1 NIES4071_16130 PF01520 N-acetylmuramoyl-L-alanine amidase NIES4071_16130 PF01471 Putative peptidoglycan binding domain NIES4071_16170 PF00588 SpoU rRNA Methylase family NIES4071_16170 PF08032 RNA 2'-O ribose methyltransferase substrate binding NIES4071_16190 PF07650 KH domain NIES4071_16190 PF01926 50S ribosome-binding GTPase NIES4071_16230 PF00300 Histidine phosphatase superfamily (branch 1) NIES4071_16250 PF03055 Retinal pigment epithelial membrane protein NIES4071_16270 PF00069 Protein kinase domain NIES4071_16370 PF00069 Protein kinase domain NIES4071_16380 PF00899 ThiF family NIES4071_16420 PF00805 Pentapeptide repeats (8 copies) NIES4071_16420 PF00069 Protein kinase domain NIES4071_16440 PF01106 NifU-like domain NIES4071_16450 PF00072 Response regulator receiver domain NIES4071_16450 PF01627 Hpt domain NIES4071_16450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_16450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_16450 PF00672 HAMP domain NIES4071_16450 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_16570 PF00069 Protein kinase domain NIES4071_16580 PF00400 WD domain, G-beta repeat NIES4071_16580 PF00931 NB-ARC domain NIES4071_16600 PF00931 NB-ARC domain NIES4071_16600 PF00400 WD domain, G-beta repeat NIES4071_16610 PF00395 S-layer homology domain NIES4071_16660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES4071_16660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES4071_16700 PF17310 Family of unknown function (DUF5357) NIES4071_16720 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NIES4071_16760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIES4071_16760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIES4071_16770 PF01726 LexA DNA binding domain NIES4071_16770 PF00717 Peptidase S24-like NIES4071_16780 PF12344 Ultra-violet resistance protein B NIES4071_16780 PF04851 Type III restriction enzyme, res subunit NIES4071_16780 PF00271 Helicase conserved C-terminal domain NIES4071_16780 PF02151 UvrB/uvrC motif NIES4071_16780 PF17757 UvrB interaction domain NIES4071_16890 PF13476 AAA domain NIES4071_16920 PF13274 Protein of unknown function (DUF4065) NIES4071_16970 PF05685 Putative restriction endonuclease NIES4071_17010 PF07690 Major Facilitator Superfamily NIES4071_17060 PF02638 Glycosyl hydrolase-like 10 NIES4071_17060 PF00395 S-layer homology domain NIES4071_17060 PF02368 Bacterial Ig-like domain (group 2) NIES4071_17080 PF02673 Bacitracin resistance protein BacA NIES4071_17110 PF00890 FAD binding domain NIES4071_17110 PF02910 Fumarate reductase flavoprotein C-term NIES4071_17130 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_17130 PF03707 Bacterial signalling protein N terminal repeat NIES4071_17130 PF00563 EAL domain NIES4071_17140 PF07884 Vitamin K epoxide reductase family NIES4071_17150 PF03437 BtpA family NIES4071_17160 PF04055 Radical SAM superfamily NIES4071_17160 PF18693 TRAM domain NIES4071_17160 PF00919 Uncharacterized protein family UPF0004 NIES4071_17170 PF00270 DEAD/DEAH box helicase NIES4071_17170 PF00271 Helicase conserved C-terminal domain NIES4071_17230 PF00535 Glycosyl transferase family 2 NIES4071_17240 PF00535 Glycosyl transferase family 2 NIES4071_17280 PF00005 ABC transporter NIES4071_17350 PF00005 ABC transporter NIES4071_17360 PF01061 ABC-2 type transporter NIES4071_17380 PF17886 HSP20-like domain found in ArsA NIES4071_17380 PF02374 Anion-transporting ATPase NIES4071_17390 PF01040 UbiA prenyltransferase family NIES4071_17410 PF00155 Aminotransferase class I and II NIES4071_17420 PF00355 Rieske [2Fe-2S] domain NIES4071_17440 PF04909 Amidohydrolase NIES4071_17450 PF02310 B12 binding domain NIES4071_17450 PF13282 Domain of unknown function (DUF4070) NIES4071_17450 PF04055 Radical SAM superfamily NIES4071_17470 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NIES4071_17480 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_17480 PF00107 Zinc-binding dehydrogenase NIES4071_17500 PF00313 'Cold-shock' DNA-binding domain NIES4071_17570 PF00459 Inositol monophosphatase family NIES4071_17580 PF03209 PUCC protein NIES4071_17590 PF00502 Phycobilisome protein NIES4071_17600 PF00502 Phycobilisome protein NIES4071_17620 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NIES4071_17640 PF04143 Sulphur transport NIES4071_17660 PF00581 Rhodanese-like domain NIES4071_17680 PF03459 TOBE domain NIES4071_17680 PF00005 ABC transporter NIES4071_17730 PF01053 Cys/Met metabolism PLP-dependent enzyme NIES4071_17740 PF01053 Cys/Met metabolism PLP-dependent enzyme NIES4071_17800 PF02082 Transcriptional regulator NIES4071_17820 PF12849 PBP superfamily domain NIES4071_17830 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_17840 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_17870 PF01053 Cys/Met metabolism PLP-dependent enzyme NIES4071_17930 PF01569 PAP2 superfamily NIES4071_17940 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_17980 PF01593 Flavin containing amine oxidoreductase NIES4071_18030 PF00400 WD domain, G-beta repeat NIES4071_18040 PF00400 WD domain, G-beta repeat NIES4071_18080 PF05977 Transmembrane secretion effector NIES4071_18090 PF00501 AMP-binding enzyme NIES4071_18090 PF08659 KR domain NIES4071_18090 PF00668 Condensation domain NIES4071_18090 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_18090 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_18090 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_18090 PF08659 KR domain NIES4071_18090 PF00550 Phosphopantetheine attachment site NIES4071_18090 PF14765 Polyketide synthase dehydratase NIES4071_18090 PF14765 Polyketide synthase dehydratase NIES4071_18090 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_18090 PF13193 AMP-binding enzyme C-terminal domain NIES4071_18090 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_18090 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_18090 PF00501 AMP-binding enzyme NIES4071_18090 PF00550 Phosphopantetheine attachment site NIES4071_18090 PF13193 AMP-binding enzyme C-terminal domain NIES4071_18090 PF00668 Condensation domain NIES4071_18100 PF00152 tRNA synthetases class II (D, K and N) NIES4071_18100 PF01336 OB-fold nucleic acid binding domain NIES4071_18190 PF00582 Universal stress protein family NIES4071_18230 PF02896 PEP-utilising enzyme, TIM barrel domain NIES4071_18230 PF00391 PEP-utilising enzyme, mobile domain NIES4071_18230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES4071_18240 PF00011 Hsp20/alpha crystallin family NIES4071_18250 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_18270 PF02027 RolB/RolC glucosidase family NIES4071_18270 PF01593 Flavin containing amine oxidoreductase NIES4071_18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_18300 PF08448 PAS fold NIES4071_18300 PF13188 PAS domain NIES4071_18300 PF00072 Response regulator receiver domain NIES4071_18300 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_18370 PF01627 Hpt domain NIES4071_18370 PF00072 Response regulator receiver domain NIES4071_18370 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18380 PF01627 Hpt domain NIES4071_18380 PF00072 Response regulator receiver domain NIES4071_18380 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18390 PF13426 PAS domain NIES4071_18390 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_18390 PF00672 HAMP domain NIES4071_18400 PF00072 Response regulator receiver domain NIES4071_18400 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18410 PF00072 Response regulator receiver domain NIES4071_18410 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_18430 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_18430 PF00563 EAL domain NIES4071_18430 PF01590 GAF domain NIES4071_18430 PF00360 Phytochrome region NIES4071_18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_18440 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_18440 PF08448 PAS fold NIES4071_18440 PF13188 PAS domain NIES4071_18440 PF00072 Response regulator receiver domain NIES4071_18450 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18450 PF01627 Hpt domain NIES4071_18450 PF00072 Response regulator receiver domain NIES4071_18460 PF00672 HAMP domain NIES4071_18460 PF13426 PAS domain NIES4071_18460 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_18470 PF00072 Response regulator receiver domain NIES4071_18470 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18480 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18480 PF00072 Response regulator receiver domain NIES4071_18490 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_18490 PF00360 Phytochrome region NIES4071_18490 PF01590 GAF domain NIES4071_18490 PF00563 EAL domain NIES4071_18500 PF00072 Response regulator receiver domain NIES4071_18500 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18510 PF00072 Response regulator receiver domain NIES4071_18510 PF00486 Transcriptional regulatory protein, C terminal NIES4071_18530 PF01593 Flavin containing amine oxidoreductase NIES4071_18540 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NIES4071_18540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIES4071_18540 PF02142 MGS-like domain NIES4071_18560 PF13638 PIN domain NIES4071_18560 PF02562 PhoH-like protein NIES4071_18580 PF00561 alpha/beta hydrolase fold NIES4071_18590 PF00011 Hsp20/alpha crystallin family NIES4071_18600 PF00011 Hsp20/alpha crystallin family NIES4071_18630 PF01888 CbiD NIES4071_18640 PF02571 Precorrin-6x reductase CbiJ/CobK NIES4071_18680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES4071_18680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_18680 PF00205 Thiamine pyrophosphate enzyme, central domain NIES4071_18690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_18690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES4071_18690 PF00205 Thiamine pyrophosphate enzyme, central domain NIES4071_18700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_18730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES4071_18730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES4071_18740 PF02570 Precorrin-8X methylmutase NIES4071_18750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_18810 PF00484 Carbonic anhydrase NIES4071_18870 PF00266 Aminotransferase class-V NIES4071_18880 PF01458 Uncharacterized protein family (UPF0051) NIES4071_18890 PF00005 ABC transporter NIES4071_18900 PF01458 Uncharacterized protein family (UPF0051) NIES4071_18950 PF01906 Putative heavy-metal-binding NIES4071_18970 PF00664 ABC transporter transmembrane region NIES4071_18970 PF00005 ABC transporter NIES4071_19000 PF00069 Protein kinase domain NIES4071_19020 PF06055 Exopolysaccharide synthesis, ExoD NIES4071_19040 PF00072 Response regulator receiver domain NIES4071_19040 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_19050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_19050 PF00672 HAMP domain NIES4071_19050 PF00989 PAS fold NIES4071_19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_19050 PF18698 Histidine kinase sensor domain NIES4071_19090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_19110 PF00795 Carbon-nitrogen hydrolase NIES4071_19120 PF01914 MarC family integral membrane protein NIES4071_19190 PF01368 DHH family NIES4071_19190 PF02272 DHHA1 domain NIES4071_19190 PF17768 RecJ OB domain NIES4071_19190 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NIES4071_19200 PF05969 Photosystem II complex subunit Ycf12 NIES4071_19230 PF00534 Glycosyl transferases group 1 NIES4071_19230 PF13579 Glycosyl transferase 4-like domain NIES4071_19250 PF13439 Glycosyltransferase Family 4 NIES4071_19250 PF00534 Glycosyl transferases group 1 NIES4071_19300 PF00535 Glycosyl transferase family 2 NIES4071_19320 PF00535 Glycosyl transferase family 2 NIES4071_19330 PF01370 NAD dependent epimerase/dehydratase family NIES4071_19340 PF01522 Polysaccharide deacetylase NIES4071_19350 PF00535 Glycosyl transferase family 2 NIES4071_19360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NIES4071_19360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NIES4071_19360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NIES4071_19370 PF00535 Glycosyl transferase family 2 NIES4071_19380 PF00005 ABC transporter NIES4071_19380 PF14524 Wzt C-terminal domain NIES4071_19420 PF00534 Glycosyl transferases group 1 NIES4071_19420 PF13477 Glycosyl transferase 4-like NIES4071_19430 PF08241 Methyltransferase domain NIES4071_19460 PF14602 Hexapeptide repeat of succinyl-transferase NIES4071_19460 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_19460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NIES4071_19560 PF13614 AAA domain NIES4071_19570 PF01169 Uncharacterized protein family UPF0016 NIES4071_19600 PF00067 Cytochrome P450 NIES4071_19610 PF02608 ABC transporter substrate-binding protein PnrA-like NIES4071_19620 PF01925 Sulfite exporter TauE/SafE NIES4071_19630 PF03069 Acetamidase/Formamidase family NIES4071_19680 PF05860 haemagglutination activity domain NIES4071_19750 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_19760 PF01730 UreF NIES4071_19770 PF05194 UreE urease accessory protein, C-terminal domain NIES4071_19770 PF02814 UreE urease accessory protein, N-terminal domain NIES4071_19790 PF01494 FAD binding domain NIES4071_19840 PF02875 Mur ligase family, glutamate ligase domain NIES4071_19840 PF08245 Mur ligase middle domain NIES4071_19840 PF01225 Mur ligase family, catalytic domain NIES4071_19860 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_19860 PF07724 AAA domain (Cdc48 subfamily) NIES4071_19860 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_19860 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_19860 PF17871 AAA lid domain NIES4071_19900 PF00005 ABC transporter NIES4071_19910 PF01593 Flavin containing amine oxidoreductase NIES4071_19920 PF05685 Putative restriction endonuclease NIES4071_19940 PF09382 RQC domain NIES4071_19940 PF16124 RecQ zinc-binding NIES4071_19940 PF00570 HRDC domain NIES4071_19940 PF00271 Helicase conserved C-terminal domain NIES4071_19940 PF00270 DEAD/DEAH box helicase NIES4071_19990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NIES4071_19990 PF00364 Biotin-requiring enzyme NIES4071_19990 PF02817 e3 binding domain NIES4071_20140 PF01361 Tautomerase enzyme NIES4071_20160 PF03412 Peptidase C39 family NIES4071_20160 PF00664 ABC transporter transmembrane region NIES4071_20160 PF00005 ABC transporter NIES4071_20170 PF02872 5'-nucleotidase, C-terminal domain NIES4071_20170 PF00149 Calcineurin-like phosphoesterase NIES4071_20190 PF07690 Major Facilitator Superfamily NIES4071_20220 PF05991 YacP-like NYN domain NIES4071_20230 PF00005 ABC transporter NIES4071_20260 PF01329 Pterin 4 alpha carbinolamine dehydratase NIES4071_20270 PF04966 Carbohydrate-selective porin, OprB family NIES4071_20270 PF00395 S-layer homology domain NIES4071_20280 PF02082 Transcriptional regulator NIES4071_20290 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_20300 PF01556 DnaJ C terminal domain NIES4071_20300 PF00684 DnaJ central domain NIES4071_20300 PF00226 DnaJ domain NIES4071_20360 PF11838 ERAP1-like C-terminal domain NIES4071_20360 PF01433 Peptidase family M1 domain NIES4071_20380 PF13439 Glycosyltransferase Family 4 NIES4071_20380 PF00534 Glycosyl transferases group 1 NIES4071_20390 PF13439 Glycosyltransferase Family 4 NIES4071_20390 PF00534 Glycosyl transferases group 1 NIES4071_20400 PF13807 G-rich domain on putative tyrosine kinase NIES4071_20400 PF13614 AAA domain NIES4071_20400 PF02706 Chain length determinant protein NIES4071_20420 PF00535 Glycosyl transferase family 2 NIES4071_20430 PF13439 Glycosyltransferase Family 4 NIES4071_20430 PF00534 Glycosyl transferases group 1 NIES4071_20440 PF00535 Glycosyl transferase family 2 NIES4071_20450 PF13439 Glycosyltransferase Family 4 NIES4071_20450 PF00534 Glycosyl transferases group 1 NIES4071_20470 PF14524 Wzt C-terminal domain NIES4071_20470 PF00005 ABC transporter NIES4071_20490 PF13439 Glycosyltransferase Family 4 NIES4071_20490 PF00534 Glycosyl transferases group 1 NIES4071_20500 PF00535 Glycosyl transferase family 2 NIES4071_20510 PF17994 Galactofuranosyltransferase 2 N-terminal NIES4071_20520 PF03275 UDP-galactopyranose mutase NIES4071_20530 PF00534 Glycosyl transferases group 1 NIES4071_20530 PF13439 Glycosyltransferase Family 4 NIES4071_20540 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_20580 PF01738 Dienelactone hydrolase family NIES4071_20690 PF12704 MacB-like periplasmic core domain NIES4071_20690 PF02687 FtsX-like permease family NIES4071_20700 PF00005 ABC transporter NIES4071_20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_20710 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_20710 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_20820 PF07194 P2 response regulator binding domain NIES4071_20820 PF01627 Hpt domain NIES4071_20820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_20820 PF02895 Signal transducing histidine kinase, homodimeric domain NIES4071_20820 PF01584 CheW-like domain NIES4071_20830 PF01590 GAF domain NIES4071_20830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_20850 PF00072 Response regulator receiver domain NIES4071_20860 PF00072 Response regulator receiver domain NIES4071_20860 PF08769 Sporulation initiation factor Spo0A C terminal NIES4071_21000 PF00437 Type II/IV secretion system protein NIES4071_21080 PF01380 SIS domain NIES4071_21110 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_21110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_21120 PF09308 LuxQ, periplasmic NIES4071_21120 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_21120 PF00072 Response regulator receiver domain NIES4071_21130 PF12804 MobA-like NTP transferase domain NIES4071_21140 PF09308 LuxQ, periplasmic NIES4071_21140 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_21140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_21140 PF00072 Response regulator receiver domain NIES4071_21150 PF00360 Phytochrome region NIES4071_21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_21150 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_21150 PF01590 GAF domain NIES4071_21150 PF08446 PAS fold NIES4071_21160 PF00072 Response regulator receiver domain NIES4071_21170 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_21170 PF01590 GAF domain NIES4071_21170 PF08446 PAS fold NIES4071_21170 PF00360 Phytochrome region NIES4071_21170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_21260 PF02469 Fasciclin domain NIES4071_21270 PF00305 Lipoxygenase NIES4071_21300 PF02469 Fasciclin domain NIES4071_21400 PF00072 Response regulator receiver domain NIES4071_21400 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_21410 PF03707 Bacterial signalling protein N terminal repeat NIES4071_21410 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_21410 PF00563 EAL domain NIES4071_21420 PF00563 EAL domain NIES4071_21420 PF00360 Phytochrome region NIES4071_21420 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_21420 PF01590 GAF domain NIES4071_21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_21430 PF00072 Response regulator receiver domain NIES4071_21430 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_21430 PF13188 PAS domain NIES4071_21430 PF08448 PAS fold NIES4071_21450 PF00072 Response regulator receiver domain NIES4071_21450 PF00196 Bacterial regulatory proteins, luxR family NIES4071_21460 PF07730 Histidine kinase NIES4071_21470 PF07244 Surface antigen variable number repeat NIES4071_21470 PF17243 POTRA domain TamA domain 1 NIES4071_21470 PF01103 Surface antigen NIES4071_21480 PF00011 Hsp20/alpha crystallin family NIES4071_21490 PF00005 ABC transporter NIES4071_21530 PF02570 Precorrin-8X methylmutase NIES4071_21570 PF01241 Photosystem I psaG / psaK NIES4071_21600 PF03109 ABC1 family NIES4071_21630 PF00069 Protein kinase domain NIES4071_21640 PF00563 EAL domain NIES4071_21640 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_21640 PF08447 PAS fold NIES4071_21640 PF08448 PAS fold NIES4071_21680 PF00551 Formyl transferase NIES4071_21700 PF03544 Gram-negative bacterial TonB protein C-terminal NIES4071_21720 PF01618 MotA/TolQ/ExbB proton channel family NIES4071_21740 PF07715 TonB-dependent Receptor Plug Domain NIES4071_21740 PF00593 TonB dependent receptor NIES4071_21780 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_21840 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NIES4071_21860 PF02151 UvrB/uvrC motif NIES4071_21860 PF01541 GIY-YIG catalytic domain NIES4071_21860 PF08459 UvrC Helix-hairpin-helix N-terminal NIES4071_21870 PF02527 rRNA small subunit methyltransferase G NIES4071_21980 PF00005 ABC transporter NIES4071_22020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_22040 PF00005 ABC transporter NIES4071_22070 PF01595 Cyclin M transmembrane N-terminal domain NIES4071_22070 PF00571 CBS domain NIES4071_22070 PF03471 Transporter associated domain NIES4071_22080 PF02559 CarD-like/TRCF domain NIES4071_22080 PF00270 DEAD/DEAH box helicase NIES4071_22080 PF00271 Helicase conserved C-terminal domain NIES4071_22080 PF03461 TRCF domain NIES4071_22080 PF17757 UvrB interaction domain NIES4071_22090 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NIES4071_22100 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NIES4071_22120 PF01494 FAD binding domain NIES4071_22140 PF02633 Creatinine amidohydrolase NIES4071_22160 PF03949 Malic enzyme, NAD binding domain NIES4071_22160 PF00390 Malic enzyme, N-terminal domain NIES4071_22170 PF00805 Pentapeptide repeats (8 copies) NIES4071_22170 PF00069 Protein kinase domain NIES4071_22180 PF13180 PDZ domain NIES4071_22190 PF13180 PDZ domain NIES4071_22220 PF13180 PDZ domain NIES4071_22260 PF00805 Pentapeptide repeats (8 copies) NIES4071_22260 PF00069 Protein kinase domain NIES4071_22400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NIES4071_22410 PF03725 3' exoribonuclease family, domain 2 NIES4071_22410 PF01138 3' exoribonuclease family, domain 1 NIES4071_22440 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NIES4071_22450 PF00692 dUTPase NIES4071_22460 PF02511 Thymidylate synthase complementing protein NIES4071_22470 PF00762 Ferrochelatase NIES4071_22550 PF00773 RNB domain NIES4071_22580 PF03454 MoeA C-terminal region (domain IV) NIES4071_22580 PF03453 MoeA N-terminal region (domain I and II) NIES4071_22580 PF00994 Probable molybdopterin binding domain NIES4071_22620 PF13533 Biotin-lipoyl like NIES4071_22630 PF00873 AcrB/AcrD/AcrF family NIES4071_22690 PF01218 Coproporphyrinogen III oxidase NIES4071_22710 PF00892 EamA-like transporter family NIES4071_22730 PF16864 Dimerisation domain NIES4071_22730 PF00891 O-methyltransferase domain NIES4071_22750 PF00547 Urease, gamma subunit NIES4071_22760 PF00699 Urease beta subunit NIES4071_22850 PF01627 Hpt domain NIES4071_22850 PF00672 HAMP domain NIES4071_22850 PF00072 Response regulator receiver domain NIES4071_22850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_22850 PF17149 Periplasmic sensor domain found in signal transduction proteins NIES4071_22850 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_22870 PF00069 Protein kinase domain NIES4071_22870 PF03793 PASTA domain NIES4071_22880 PF00174 Oxidoreductase molybdopterin binding domain NIES4071_22890 PF01783 Ribosomal L32p protein family NIES4071_22930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NIES4071_22930 PF17770 Ribonuclease J C-terminal domain NIES4071_22930 PF00753 Metallo-beta-lactamase superfamily NIES4071_22940 PF00701 Dihydrodipicolinate synthetase family NIES4071_22950 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIES4071_22950 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIES4071_22960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIES4071_22960 PF05698 Bacterial trigger factor protein (TF) C-terminus NIES4071_22960 PF05697 Bacterial trigger factor protein (TF) NIES4071_22970 PF00574 Clp protease NIES4071_22980 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_22980 PF07724 AAA domain (Cdc48 subfamily) NIES4071_22980 PF06689 ClpX C4-type zinc finger NIES4071_22990 PF00561 alpha/beta hydrolase fold NIES4071_23000 PF07702 UTRA domain NIES4071_23000 PF00392 Bacterial regulatory proteins, gntR family NIES4071_23010 PF01738 Dienelactone hydrolase family NIES4071_23020 PF00575 S1 RNA binding domain NIES4071_23050 PF02445 Quinolinate synthetase A protein NIES4071_23110 PF02091 Glycyl-tRNA synthetase alpha subunit NIES4071_23150 PF09587 Bacterial capsule synthesis protein PGA_cap NIES4071_23170 PF02540 NAD synthase NIES4071_23180 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_23180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_23200 PF04055 Radical SAM superfamily NIES4071_23210 PF00072 Response regulator receiver domain NIES4071_23210 PF00486 Transcriptional regulatory protein, C terminal NIES4071_23220 PF03793 PASTA domain NIES4071_23220 PF00069 Protein kinase domain NIES4071_23230 PF00891 O-methyltransferase domain NIES4071_23310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_23320 PF01751 Toprim domain NIES4071_23320 PF01131 DNA topoisomerase NIES4071_23320 PF13368 Topoisomerase C-terminal repeat NIES4071_23340 PF01220 Dehydroquinase class II NIES4071_23360 PF01966 HD domain NIES4071_23360 PF07697 7TM-HD extracellular NIES4071_23360 PF07698 7TM receptor with intracellular HD hydrolase NIES4071_23420 PF12833 Helix-turn-helix domain NIES4071_23420 PF01965 DJ-1/PfpI family NIES4071_23430 PF01794 Ferric reductase like transmembrane component NIES4071_23440 PF17755 UvrA DNA-binding domain NIES4071_23440 PF17760 UvrA interaction domain NIES4071_23470 PF00326 Prolyl oligopeptidase family NIES4071_23510 PF00873 AcrB/AcrD/AcrF family NIES4071_23550 PF01743 Poly A polymerase head domain NIES4071_23550 PF12627 Probable RNA and SrmB- binding site of polymerase A NIES4071_23550 PF13735 tRNA nucleotidyltransferase domain 2 putative NIES4071_23560 PF01737 YCF9 NIES4071_23630 PF00012 Hsp70 protein NIES4071_23650 PF00072 Response regulator receiver domain NIES4071_23650 PF00989 PAS fold NIES4071_23650 PF01627 Hpt domain NIES4071_23650 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_23650 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_23650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_23810 PF18337 RapA N-terminal Tudor like domain NIES4071_23810 PF18339 RapA N-terminal Tudor like domain 1 NIES4071_23810 PF00176 SNF2 family N-terminal domain NIES4071_23810 PF12137 RNA polymerase recycling family C-terminal NIES4071_23810 PF00271 Helicase conserved C-terminal domain NIES4071_23840 PF01380 SIS domain NIES4071_23860 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_23900 PF12838 4Fe-4S dicluster domain NIES4071_23950 PF13439 Glycosyltransferase Family 4 NIES4071_23960 PF00118 TCP-1/cpn60 chaperonin family NIES4071_23970 PF00166 Chaperonin 10 Kd subunit NIES4071_24000 PF00561 alpha/beta hydrolase fold NIES4071_24010 PF04055 Radical SAM superfamily NIES4071_24040 PF01116 Fructose-bisphosphate aldolase class-II NIES4071_24080 PF17782 DprA winged helix domain NIES4071_24080 PF02481 DNA recombination-mediator protein A NIES4071_24100 PF00486 Transcriptional regulatory protein, C terminal NIES4071_24100 PF00072 Response regulator receiver domain NIES4071_24110 PF00360 Phytochrome region NIES4071_24110 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_24110 PF00563 EAL domain NIES4071_24110 PF01590 GAF domain NIES4071_24130 PF00588 SpoU rRNA Methylase family NIES4071_24140 PF01568 Molydopterin dinucleotide binding domain NIES4071_24140 PF00384 Molybdopterin oxidoreductase NIES4071_24230 PF00145 C-5 cytosine-specific DNA methylase NIES4071_24310 PF02743 Cache domain NIES4071_24310 PF00672 HAMP domain NIES4071_24310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_24330 PF10609 NUBPL iron-transfer P-loop NTPase NIES4071_24330 PF01883 Iron-sulfur cluster assembly protein NIES4071_24360 PF13186 Iron-sulfur cluster-binding domain NIES4071_24360 PF04055 Radical SAM superfamily NIES4071_24380 PF03412 Peptidase C39 family NIES4071_24380 PF00664 ABC transporter transmembrane region NIES4071_24380 PF00005 ABC transporter NIES4071_24390 PF03412 Peptidase C39 family NIES4071_24390 PF00005 ABC transporter NIES4071_24390 PF00664 ABC transporter transmembrane region NIES4071_24470 PF01043 SecA preprotein cross-linking domain NIES4071_24470 PF07517 SecA DEAD-like domain NIES4071_24470 PF07516 SecA Wing and Scaffold domain NIES4071_24500 PF17863 AAA lid domain NIES4071_24500 PF07726 ATPase family associated with various cellular activities (AAA) NIES4071_24510 PF01687 Riboflavin kinase NIES4071_24510 PF06574 FAD synthetase NIES4071_24520 PF12706 Beta-lactamase superfamily domain NIES4071_24550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NIES4071_24550 PF01409 tRNA synthetases class II core domain (F) NIES4071_24560 PF16124 RecQ zinc-binding NIES4071_24560 PF00271 Helicase conserved C-terminal domain NIES4071_24560 PF00270 DEAD/DEAH box helicase NIES4071_24590 PF00958 GMP synthase C terminal domain NIES4071_24590 PF13302 Acetyltransferase (GNAT) domain NIES4071_24590 PF13673 Acetyltransferase (GNAT) domain NIES4071_24590 PF03352 Methyladenine glycosylase NIES4071_24590 PF00117 Glutamine amidotransferase class-I NIES4071_24660 PF00072 Response regulator receiver domain NIES4071_24670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_24670 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_24670 PF00989 PAS fold NIES4071_24670 PF16736 Single Cache-like NIES4071_24690 PF00266 Aminotransferase class-V NIES4071_24700 PF00069 Protein kinase domain NIES4071_24700 PF03793 PASTA domain NIES4071_24780 PF00931 NB-ARC domain NIES4071_24780 PF00400 WD domain, G-beta repeat NIES4071_24820 PF00005 ABC transporter NIES4071_24860 PF03109 ABC1 family NIES4071_24870 PF00483 Nucleotidyl transferase NIES4071_24870 PF01050 Mannose-6-phosphate isomerase NIES4071_24880 PF03816 Cell envelope-related transcriptional attenuator domain NIES4071_24890 PF00072 Response regulator receiver domain NIES4071_24890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_24890 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_24890 PF09308 LuxQ, periplasmic NIES4071_24900 PF00072 Response regulator receiver domain NIES4071_24930 PF03023 Lipid II flippase MurJ NIES4071_25000 PF00072 Response regulator receiver domain NIES4071_25030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES4071_25030 PF09180 Prolyl-tRNA synthetase, C-terminal NIES4071_25030 PF03129 Anticodon binding domain NIES4071_25040 PF00445 Ribonuclease T2 family NIES4071_25060 PF13191 AAA ATPase domain NIES4071_25060 PF00069 Protein kinase domain NIES4071_25160 PF13183 4Fe-4S dicluster domain NIES4071_25160 PF02754 Cysteine-rich domain NIES4071_25170 PF02913 FAD linked oxidases, C-terminal domain NIES4071_25170 PF01565 FAD binding domain NIES4071_25180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_25180 PF07568 Histidine kinase NIES4071_25180 PF12282 Signal transduction histidine kinase NIES4071_25190 PF00672 HAMP domain NIES4071_25190 PF13426 PAS domain NIES4071_25190 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_25190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_25200 PF03459 TOBE domain NIES4071_25200 PF00005 ABC transporter NIES4071_25220 PF00395 S-layer homology domain NIES4071_25220 PF04966 Carbohydrate-selective porin, OprB family NIES4071_25230 PF00535 Glycosyl transferase family 2 NIES4071_25240 PF00534 Glycosyl transferases group 1 NIES4071_25250 PF13439 Glycosyltransferase Family 4 NIES4071_25250 PF00534 Glycosyl transferases group 1 NIES4071_25260 PF00300 Histidine phosphatase superfamily (branch 1) NIES4071_25270 PF00664 ABC transporter transmembrane region NIES4071_25270 PF00005 ABC transporter NIES4071_25290 PF04101 Glycosyltransferase family 28 C-terminal domain NIES4071_25290 PF03033 Glycosyltransferase family 28 N-terminal domain NIES4071_25300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NIES4071_25300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NIES4071_25300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NIES4071_25330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_25330 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_25330 PF18719 ArlS sensor domain NIES4071_25340 PF00486 Transcriptional regulatory protein, C terminal NIES4071_25340 PF00072 Response regulator receiver domain NIES4071_25360 PF00486 Transcriptional regulatory protein, C terminal NIES4071_25360 PF00072 Response regulator receiver domain NIES4071_25370 PF01494 FAD binding domain NIES4071_25390 PF00486 Transcriptional regulatory protein, C terminal NIES4071_25390 PF00072 Response regulator receiver domain NIES4071_25400 PF12697 Alpha/beta hydrolase family NIES4071_25500 PF00753 Metallo-beta-lactamase superfamily NIES4071_25500 PF01613 Flavin reductase like domain NIES4071_25510 PF01613 Flavin reductase like domain NIES4071_25510 PF00258 Flavodoxin NIES4071_25560 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_25680 PF02885 Glycosyl transferase family, helical bundle domain NIES4071_25680 PF00591 Glycosyl transferase family, a/b domain NIES4071_25690 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_25750 PF04820 Tryptophan halogenase NIES4071_25800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_25820 PF12704 MacB-like periplasmic core domain NIES4071_25820 PF02687 FtsX-like permease family NIES4071_25820 PF00005 ABC transporter NIES4071_25840 PF01494 FAD binding domain NIES4071_25870 PF03358 NADPH-dependent FMN reductase NIES4071_25880 PF00793 DAHP synthetase I family NIES4071_25880 PF18152 DAHP synthase ferredoxin-like domain NIES4071_25890 PF00425 chorismate binding enzyme NIES4071_25890 PF04715 Anthranilate synthase component I, N terminal region NIES4071_25890 PF00117 Glutamine amidotransferase class-I NIES4071_25910 PF13847 Methyltransferase domain NIES4071_25940 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_25940 PF14497 Glutathione S-transferase, C-terminal domain NIES4071_25950 PF03466 LysR substrate binding domain NIES4071_25950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_26000 PF12728 Helix-turn-helix domain NIES4071_26020 PF01636 Phosphotransferase enzyme family NIES4071_26040 PF00072 Response regulator receiver domain NIES4071_26040 PF00196 Bacterial regulatory proteins, luxR family NIES4071_26060 PF00581 Rhodanese-like domain NIES4071_26070 PF01209 ubiE/COQ5 methyltransferase family NIES4071_26170 PF12697 Alpha/beta hydrolase family NIES4071_26210 PF00072 Response regulator receiver domain NIES4071_26210 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_26210 PF00989 PAS fold NIES4071_26210 PF01627 Hpt domain NIES4071_26210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_26210 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_26250 PF00067 Cytochrome P450 NIES4071_26280 PF01638 HxlR-like helix-turn-helix NIES4071_26480 PF01048 Phosphorylase superfamily NIES4071_26510 PF13180 PDZ domain NIES4071_26520 PF01497 Periplasmic binding protein NIES4071_26540 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NIES4071_26590 PF07282 Putative transposase DNA-binding domain NIES4071_26590 PF12323 Helix-turn-helix domain NIES4071_26590 PF01385 Probable transposase NIES4071_26620 PF00510 Cytochrome c oxidase subunit III NIES4071_26640 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_26650 PF00239 Resolvase, N terminal domain NIES4071_26650 PF02796 Helix-turn-helix domain of resolvase NIES4071_26670 PF00400 WD domain, G-beta repeat NIES4071_26670 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_26690 PF00732 GMC oxidoreductase NIES4071_26690 PF05199 GMC oxidoreductase NIES4071_26710 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES4071_26710 PF00005 ABC transporter NIES4071_26740 PF12849 PBP superfamily domain NIES4071_26750 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_26760 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_26770 PF00005 ABC transporter NIES4071_26840 PF00400 WD domain, G-beta repeat NIES4071_26850 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding NIES4071_26850 PF01565 FAD binding domain NIES4071_26870 PF08546 Ketopantoate reductase PanE/ApbA C terminal NIES4071_26870 PF02558 Ketopantoate reductase PanE/ApbA NIES4071_26940 PF05199 GMC oxidoreductase NIES4071_26940 PF00732 GMC oxidoreductase NIES4071_26960 PF08244 Glycosyl hydrolases family 32 C terminal NIES4071_26960 PF00251 Glycosyl hydrolases family 32 N-terminal domain NIES4071_26970 PF00067 Cytochrome P450 NIES4071_27000 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_27070 PF13533 Biotin-lipoyl like NIES4071_27090 PF00501 AMP-binding enzyme NIES4071_27090 PF13193 AMP-binding enzyme C-terminal domain NIES4071_27090 PF00668 Condensation domain NIES4071_27090 PF00550 Phosphopantetheine attachment site NIES4071_27100 PF00501 AMP-binding enzyme NIES4071_27100 PF00550 Phosphopantetheine attachment site NIES4071_27100 PF07993 Male sterility protein NIES4071_27100 PF00668 Condensation domain NIES4071_27100 PF13193 AMP-binding enzyme C-terminal domain NIES4071_27130 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_27140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIES4071_27140 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NIES4071_27240 PF13439 Glycosyltransferase Family 4 NIES4071_27240 PF00534 Glycosyl transferases group 1 NIES4071_27250 PF00535 Glycosyl transferase family 2 NIES4071_27260 PF00535 Glycosyl transferase family 2 NIES4071_27280 PF01370 NAD dependent epimerase/dehydratase family NIES4071_27290 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_27330 PF01370 NAD dependent epimerase/dehydratase family NIES4071_27340 PF02397 Bacterial sugar transferase NIES4071_27350 PF02706 Chain length determinant protein NIES4071_27350 PF13807 G-rich domain on putative tyrosine kinase NIES4071_27350 PF13614 AAA domain NIES4071_27370 PF00400 WD domain, G-beta repeat NIES4071_27370 PF00931 NB-ARC domain NIES4071_27380 PF02463 RecF/RecN/SMC N terminal domain NIES4071_27400 PF13180 PDZ domain NIES4071_27410 PF00400 WD domain, G-beta repeat NIES4071_27450 PF00082 Subtilase family NIES4071_27480 PF00082 Subtilase family NIES4071_27480 PF05922 Peptidase inhibitor I9 NIES4071_27520 PF01266 FAD dependent oxidoreductase NIES4071_27620 PF01039 Carboxyl transferase domain NIES4071_27620 PF17848 Acetyl-coA carboxylase zinc finger domain NIES4071_27630 PF01478 Type IV leader peptidase family NIES4071_27630 PF06750 Bacterial Peptidase A24 N-terminal domain NIES4071_27680 PF00005 ABC transporter NIES4071_27700 PF00549 CoA-ligase NIES4071_27700 PF02629 CoA binding domain NIES4071_27710 PF00549 CoA-ligase NIES4071_27710 PF08442 ATP-grasp domain NIES4071_27730 PF03649 Uncharacterised protein family (UPF0014) NIES4071_27740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIES4071_27760 PF00400 WD domain, G-beta repeat NIES4071_27760 PF00931 NB-ARC domain NIES4071_27770 PF00400 WD domain, G-beta repeat NIES4071_27770 PF00931 NB-ARC domain NIES4071_27850 PF17761 DUF1016 N-terminal domain NIES4071_27850 PF06250 YhcG PDDEXK nuclease domain NIES4071_27860 PF17761 DUF1016 N-terminal domain NIES4071_27860 PF06250 YhcG PDDEXK nuclease domain NIES4071_27870 PF13193 AMP-binding enzyme C-terminal domain NIES4071_27870 PF00668 Condensation domain NIES4071_27870 PF00550 Phosphopantetheine attachment site NIES4071_27870 PF00975 Thioesterase domain NIES4071_27870 PF00501 AMP-binding enzyme NIES4071_27880 PF16921 Tex protein YqgF-like domain NIES4071_27880 PF17674 HHH domain NIES4071_27880 PF00575 S1 RNA binding domain NIES4071_27880 PF09371 Tex-like protein N-terminal domain NIES4071_27980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIES4071_28010 PF01679 Proteolipid membrane potential modulator NIES4071_28030 PF00271 Helicase conserved C-terminal domain NIES4071_28030 PF04851 Type III restriction enzyme, res subunit NIES4071_28030 PF02151 UvrB/uvrC motif NIES4071_28030 PF12344 Ultra-violet resistance protein B NIES4071_28030 PF17757 UvrB interaction domain NIES4071_28060 PF01797 Transposase IS200 like NIES4071_28080 PF01546 Peptidase family M20/M25/M40 NIES4071_28080 PF07687 Peptidase dimerisation domain NIES4071_28100 PF00069 Protein kinase domain NIES4071_28110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NIES4071_28110 PF14572 Phosphoribosyl synthetase-associated domain NIES4071_28160 PF00805 Pentapeptide repeats (8 copies) NIES4071_28160 PF00069 Protein kinase domain NIES4071_28260 PF00561 alpha/beta hydrolase fold NIES4071_28270 PF02583 Metal-sensitive transcriptional repressor NIES4071_28280 PF13180 PDZ domain NIES4071_28290 PF00069 Protein kinase domain NIES4071_28290 PF00400 WD domain, G-beta repeat NIES4071_28300 PF13619 KTSC domain NIES4071_28300 PF00152 tRNA synthetases class II (D, K and N) NIES4071_28300 PF01336 OB-fold nucleic acid binding domain NIES4071_28390 PF00400 WD domain, G-beta repeat NIES4071_28390 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_28410 PF00069 Protein kinase domain NIES4071_28410 PF00805 Pentapeptide repeats (8 copies) NIES4071_28460 PF00106 short chain dehydrogenase NIES4071_28470 PF00654 Voltage gated chloride channel NIES4071_28490 PF01207 Dihydrouridine synthase (Dus) NIES4071_28550 PF01425 Amidase NIES4071_28560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIES4071_28560 PF14579 Helix-hairpin-helix motif NIES4071_28560 PF01336 OB-fold nucleic acid binding domain NIES4071_28560 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIES4071_28560 PF02811 PHP domain NIES4071_28640 PF13274 Protein of unknown function (DUF4065) NIES4071_28700 PF00676 Dehydrogenase E1 component NIES4071_28730 PF01116 Fructose-bisphosphate aldolase class-II NIES4071_28740 PF00072 Response regulator receiver domain NIES4071_28740 PF14332 Domain of unknown function (DUF4388) NIES4071_28750 PF01479 S4 domain NIES4071_28750 PF00849 RNA pseudouridylate synthase NIES4071_28770 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES4071_28780 PF00664 ABC transporter transmembrane region NIES4071_28780 PF00005 ABC transporter NIES4071_28810 PF00733 Asparagine synthase NIES4071_28810 PF13537 Glutamine amidotransferase domain NIES4071_28840 PF00005 ABC transporter NIES4071_28880 PF13537 Glutamine amidotransferase domain NIES4071_28880 PF00733 Asparagine synthase NIES4071_28910 PF08007 Cupin superfamily protein NIES4071_28930 PF03551 Transcriptional regulator PadR-like family NIES4071_28930 PF13847 Methyltransferase domain NIES4071_28940 PF00005 ABC transporter NIES4071_28960 PF16363 GDP-mannose 4,6 dehydratase NIES4071_28970 PF00483 Nucleotidyl transferase NIES4071_28980 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NIES4071_28990 PF04321 RmlD substrate binding domain NIES4071_29040 PF00534 Glycosyl transferases group 1 NIES4071_29050 PF12708 Pectate lyase superfamily protein NIES4071_29050 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) NIES4071_29050 PF08548 Peptidase M10 serralysin C terminal NIES4071_29070 PF13439 Glycosyltransferase Family 4 NIES4071_29070 PF00534 Glycosyl transferases group 1 NIES4071_29090 PF00534 Glycosyl transferases group 1 NIES4071_29090 PF13439 Glycosyltransferase Family 4 NIES4071_29100 PF13439 Glycosyltransferase Family 4 NIES4071_29100 PF00534 Glycosyl transferases group 1 NIES4071_29110 PF00534 Glycosyl transferases group 1 NIES4071_29110 PF13439 Glycosyltransferase Family 4 NIES4071_29130 PF00535 Glycosyl transferase family 2 NIES4071_29140 PF00535 Glycosyl transferase family 2 NIES4071_29150 PF00535 Glycosyl transferase family 2 NIES4071_29160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NIES4071_29160 PF01565 FAD binding domain NIES4071_29220 PF13614 AAA domain NIES4071_29270 PF13302 Acetyltransferase (GNAT) domain NIES4071_29310 PF00485 Phosphoribulokinase / Uridine kinase family NIES4071_29320 PF04483 Protein of unknown function (DUF565) NIES4071_29420 PF01327 Polypeptide deformylase NIES4071_29440 PF00082 Subtilase family NIES4071_29450 PF00082 Subtilase family NIES4071_29570 PF01556 DnaJ C terminal domain NIES4071_29570 PF00226 DnaJ domain NIES4071_29620 PF02675 S-adenosylmethionine decarboxylase NIES4071_29660 PF00305 Lipoxygenase NIES4071_29670 PF01510 N-acetylmuramoyl-L-alanine amidase NIES4071_29670 PF01471 Putative peptidoglycan binding domain NIES4071_29690 PF04072 Leucine carboxyl methyltransferase NIES4071_29720 PF00171 Aldehyde dehydrogenase family NIES4071_29740 PF16884 N-terminal domain of oxidoreductase NIES4071_29740 PF00107 Zinc-binding dehydrogenase NIES4071_29810 PF14579 Helix-hairpin-helix motif NIES4071_29810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIES4071_29810 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIES4071_29810 PF02811 PHP domain NIES4071_29810 PF01336 OB-fold nucleic acid binding domain NIES4071_29820 PF03222 Tryptophan/tyrosine permease family NIES4071_29830 PF01381 Helix-turn-helix NIES4071_29860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES4071_29910 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_29940 PF01124 MAPEG family NIES4071_29980 PF12681 Glyoxalase-like domain NIES4071_30050 PF06508 Queuosine biosynthesis protein QueC NIES4071_30060 PF00871 Acetokinase family NIES4071_30110 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NIES4071_30230 PF00005 ABC transporter NIES4071_30290 PF00557 Metallopeptidase family M24 NIES4071_30320 PF04073 Aminoacyl-tRNA editing domain NIES4071_30330 PF07690 Major Facilitator Superfamily NIES4071_30340 PF00534 Glycosyl transferases group 1 NIES4071_30340 PF13439 Glycosyltransferase Family 4 NIES4071_30350 PF10079 Bacillithiol biosynthesis BshC NIES4071_30360 PF01872 RibD C-terminal domain NIES4071_30370 PF01872 RibD C-terminal domain NIES4071_30410 PF02875 Mur ligase family, glutamate ligase domain NIES4071_30410 PF08245 Mur ligase middle domain NIES4071_30420 PF02092 Glycyl-tRNA synthetase beta subunit NIES4071_30530 PF02195 ParB-like nuclease domain NIES4071_30540 PF13614 AAA domain NIES4071_30650 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_30660 PF02463 RecF/RecN/SMC N terminal domain NIES4071_30670 PF01594 AI-2E family transporter NIES4071_30680 PF00293 NUDIX domain NIES4071_30710 PF00348 Polyprenyl synthetase NIES4071_30720 PF02681 Divergent PAP2 family NIES4071_30740 PF10674 Protein of unknown function (DUF2488) NIES4071_30790 PF09335 SNARE associated Golgi protein NIES4071_30850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NIES4071_30850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NIES4071_30860 PF00069 Protein kinase domain NIES4071_30860 PF03793 PASTA domain NIES4071_30900 PF00005 ABC transporter NIES4071_30900 PF13732 Domain of unknown function (DUF4162) NIES4071_30930 PF00578 AhpC/TSA family NIES4071_30980 PF01593 Flavin containing amine oxidoreductase NIES4071_31030 PF01521 Iron-sulphur cluster biosynthesis NIES4071_31060 PF01370 NAD dependent epimerase/dehydratase family NIES4071_31060 PF08338 Domain of unknown function (DUF1731) NIES4071_31090 PF00403 Heavy-metal-associated domain NIES4071_31130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_31150 PF02525 Flavodoxin-like fold NIES4071_31160 PF02223 Thymidylate kinase NIES4071_31170 PF09115 DNA polymerase III, delta subunit, C terminal NIES4071_31190 PF00578 AhpC/TSA family NIES4071_31220 PF07730 Histidine kinase NIES4071_31260 PF01654 Cytochrome bd terminal oxidase subunit I NIES4071_31280 PF00355 Rieske [2Fe-2S] domain NIES4071_31310 PF13249 Squalene-hopene cyclase N-terminal domain NIES4071_31310 PF13243 Squalene-hopene cyclase C-terminal domain NIES4071_31320 PF00535 Glycosyl transferase family 2 NIES4071_31360 PF00873 AcrB/AcrD/AcrF family NIES4071_31370 PF01370 NAD dependent epimerase/dehydratase family NIES4071_31380 PF04055 Radical SAM superfamily NIES4071_31380 PF06463 Molybdenum Cofactor Synthesis C NIES4071_31390 PF00920 Dehydratase family NIES4071_31400 PF02401 LytB protein NIES4071_31420 PF00909 Ammonium Transporter Family NIES4071_31430 PF02669 K+-transporting ATPase, c chain NIES4071_31460 PF03814 Potassium-transporting ATPase A subunit NIES4071_31470 PF00270 DEAD/DEAH box helicase NIES4071_31470 PF00271 Helicase conserved C-terminal domain NIES4071_31470 PF17764 3′ DNA-binding domain (3′BD) NIES4071_31470 PF18074 Primosomal protein N C-terminal domain NIES4071_31470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NIES4071_31480 PF00140 Sigma-70 factor, region 1.2 NIES4071_31480 PF04542 Sigma-70 region 2 NIES4071_31480 PF04539 Sigma-70 region 3 NIES4071_31480 PF04545 Sigma-70, region 4 NIES4071_31500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIES4071_31570 PF00005 ABC transporter NIES4071_31600 PF04389 Peptidase family M28 NIES4071_31620 PF02543 Carbamoyltransferase N-terminus NIES4071_31620 PF16861 Carbamoyltransferase C-terminus NIES4071_31630 PF16363 GDP-mannose 4,6 dehydratase NIES4071_31650 PF00005 ABC transporter NIES4071_31650 PF00664 ABC transporter transmembrane region NIES4071_31660 PF12557 Cob(I)alamin adenosyltransferase N terminal NIES4071_31660 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NIES4071_31670 PF00196 Bacterial regulatory proteins, luxR family NIES4071_31670 PF00072 Response regulator receiver domain NIES4071_31700 PF01427 D-ala-D-ala dipeptidase NIES4071_31760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NIES4071_31760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NIES4071_31770 PF01467 Cytidylyltransferase-like NIES4071_31790 PF02540 NAD synthase NIES4071_31790 PF00795 Carbon-nitrogen hydrolase NIES4071_31840 PF04607 Region found in RelA / SpoT proteins NIES4071_31840 PF02824 TGS domain NIES4071_31840 PF13291 ACT domain NIES4071_31870 PF00012 Hsp70 protein NIES4071_31880 PF06314 Acetoacetate decarboxylase (ADC) NIES4071_31900 PF00989 PAS fold NIES4071_31900 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_31900 PF18698 Histidine kinase sensor domain NIES4071_31900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_31900 PF00672 HAMP domain NIES4071_31910 PF00486 Transcriptional regulatory protein, C terminal NIES4071_31910 PF01627 Hpt domain NIES4071_31910 PF00072 Response regulator receiver domain NIES4071_31920 PF00101 Ribulose bisphosphate carboxylase, small chain NIES4071_31950 PF01062 Bestrophin, RFP-TM, chloride channel NIES4071_31970 PF00005 ABC transporter NIES4071_32070 PF12838 4Fe-4S dicluster domain NIES4071_32080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIES4071_32080 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NIES4071_32090 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_32140 PF17862 AAA+ lid domain NIES4071_32140 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_32140 PF01434 Peptidase family M41 NIES4071_32200 PF00239 Resolvase, N terminal domain NIES4071_32200 PF02796 Helix-turn-helix domain of resolvase NIES4071_32210 PF02796 Helix-turn-helix domain of resolvase NIES4071_32210 PF00239 Resolvase, N terminal domain NIES4071_32230 PF00005 ABC transporter NIES4071_32260 PF00085 Thioredoxin NIES4071_32280 PF00085 Thioredoxin NIES4071_32300 PF04542 Sigma-70 region 2 NIES4071_32300 PF04545 Sigma-70, region 4 NIES4071_32330 PF01627 Hpt domain NIES4071_32330 PF00072 Response regulator receiver domain NIES4071_32330 PF00486 Transcriptional regulatory protein, C terminal NIES4071_32340 PF02954 Bacterial regulatory protein, Fis family NIES4071_32340 PF00072 Response regulator receiver domain NIES4071_32340 PF00158 Sigma-54 interaction domain NIES4071_32430 PF00239 Resolvase, N terminal domain NIES4071_32430 PF02796 Helix-turn-helix domain of resolvase NIES4071_32440 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_32450 PF00510 Cytochrome c oxidase subunit III NIES4071_32550 PF00199 Catalase NIES4071_32580 PF03960 ArsC family NIES4071_32650 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_32750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NIES4071_32750 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal NIES4071_32760 PF00374 Nickel-dependent hydrogenase NIES4071_32770 PF00535 Glycosyl transferase family 2 NIES4071_32790 PF00300 Histidine phosphatase superfamily (branch 1) NIES4071_32830 PF01761 3-dehydroquinate synthase NIES4071_32850 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_32890 PF05082 Rop-like NIES4071_32900 PF03270 Protein of unknown function, DUF269 NIES4071_32910 PF02579 Dinitrogenase iron-molybdenum cofactor NIES4071_32920 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_32930 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_32940 PF11844 Domain of unknown function (DUF3364) NIES4071_32940 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_33040 PF01930 Domain of unknown function DUF83 NIES4071_33040 PF01867 CRISPR associated protein Cas1 NIES4071_33050 PF01867 CRISPR associated protein Cas1 NIES4071_33060 PF09827 CRISPR associated protein Cas2 NIES4071_33130 PF14492 Elongation Factor G, domain II NIES4071_33130 PF03764 Elongation factor G, domain IV NIES4071_33130 PF00009 Elongation factor Tu GTP binding domain NIES4071_33130 PF03144 Elongation factor Tu domain 2 NIES4071_33130 PF00679 Elongation factor G C-terminus NIES4071_33150 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_33150 PF11844 Domain of unknown function (DUF3364) NIES4071_33160 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_33170 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NIES4071_33190 PF01648 4'-phosphopantetheinyl transferase superfamily NIES4071_33230 PF00975 Thioesterase domain NIES4071_33240 PF13649 Methyltransferase domain NIES4071_33250 PF00668 Condensation domain NIES4071_33250 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33250 PF00501 AMP-binding enzyme NIES4071_33250 PF00202 Aminotransferase class-III NIES4071_33250 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_33250 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_33250 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_33250 PF00550 Phosphopantetheine attachment site NIES4071_33260 PF00550 Phosphopantetheine attachment site NIES4071_33260 PF07993 Male sterility protein NIES4071_33260 PF00668 Condensation domain NIES4071_33260 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33260 PF00501 AMP-binding enzyme NIES4071_33270 PF00501 AMP-binding enzyme NIES4071_33270 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33270 PF00668 Condensation domain NIES4071_33270 PF00550 Phosphopantetheine attachment site NIES4071_33280 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33280 PF07993 Male sterility protein NIES4071_33280 PF00501 AMP-binding enzyme NIES4071_33280 PF00550 Phosphopantetheine attachment site NIES4071_33280 PF00668 Condensation domain NIES4071_33290 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33290 PF00668 Condensation domain NIES4071_33290 PF00550 Phosphopantetheine attachment site NIES4071_33290 PF00501 AMP-binding enzyme NIES4071_33300 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_33300 PF00698 Acyl transferase domain NIES4071_33300 PF00550 Phosphopantetheine attachment site NIES4071_33300 PF00698 Acyl transferase domain NIES4071_33300 PF00668 Condensation domain NIES4071_33300 PF00550 Phosphopantetheine attachment site NIES4071_33300 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_33300 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_33300 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_33300 PF00668 Condensation domain NIES4071_33300 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_33300 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_33310 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33310 PF00668 Condensation domain NIES4071_33310 PF00501 AMP-binding enzyme NIES4071_33310 PF00550 Phosphopantetheine attachment site NIES4071_33310 PF00501 AMP-binding enzyme NIES4071_33310 PF13193 AMP-binding enzyme C-terminal domain NIES4071_33310 PF00668 Condensation domain NIES4071_33310 PF00550 Phosphopantetheine attachment site NIES4071_33320 PF00593 TonB dependent receptor NIES4071_33320 PF07715 TonB-dependent Receptor Plug Domain NIES4071_33340 PF01497 Periplasmic binding protein NIES4071_33350 PF07690 Major Facilitator Superfamily NIES4071_33360 PF01804 Penicillin amidase NIES4071_33390 PF00892 EamA-like transporter family NIES4071_33400 PF01032 FecCD transport family NIES4071_33410 PF01032 FecCD transport family NIES4071_33430 PF01814 Hemerythrin HHE cation binding domain NIES4071_33440 PF00005 ABC transporter NIES4071_33450 PF02472 Biopolymer transport protein ExbD/TolR NIES4071_33460 PF01618 MotA/TolQ/ExbB proton channel family NIES4071_33510 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NIES4071_33580 PF01850 PIN domain NIES4071_33630 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NIES4071_33640 PF04324 BFD-like [2Fe-2S] binding domain NIES4071_33640 PF01592 NifU-like N terminal domain NIES4071_33640 PF01106 NifU-like domain NIES4071_33660 PF00037 4Fe-4S binding domain NIES4071_33670 PF04055 Radical SAM superfamily NIES4071_33670 PF02579 Dinitrogenase iron-molybdenum cofactor NIES4071_33690 PF13439 Glycosyltransferase Family 4 NIES4071_33690 PF00534 Glycosyl transferases group 1 NIES4071_33700 PF11910 Cyanobacterial and plant NDH-1 subunit O NIES4071_33710 PF06827 Zinc finger found in FPG and IleRS NIES4071_33710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NIES4071_33710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NIES4071_33720 PF02427 Photosystem I reaction centre subunit IV / PsaE NIES4071_33750 PF00953 Glycosyl transferase family 4 NIES4071_33750 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NIES4071_33760 PF00994 Probable molybdopterin binding domain NIES4071_33770 PF03912 Psb28 protein NIES4071_33790 PF00216 Bacterial DNA-binding protein NIES4071_33800 PF00155 Aminotransferase class I and II NIES4071_33810 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_33810 PF00403 Heavy-metal-associated domain NIES4071_33810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_33820 PF12452 Protein of unknown function (DUF3685) NIES4071_33820 PF00072 Response regulator receiver domain NIES4071_33840 PF01475 Ferric uptake regulator family NIES4071_33950 PF00664 ABC transporter transmembrane region NIES4071_33950 PF00005 ABC transporter NIES4071_33980 PF02805 Metal binding domain of Ada NIES4071_33980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NIES4071_33980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NIES4071_33980 PF12833 Helix-turn-helix domain NIES4071_33990 PF01209 ubiE/COQ5 methyltransferase family NIES4071_34050 PF04752 ChaC-like protein NIES4071_34070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NIES4071_34070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NIES4071_34070 PF00378 Enoyl-CoA hydratase/isomerase NIES4071_34090 PF00378 Enoyl-CoA hydratase/isomerase NIES4071_34100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_34110 PF03466 LysR substrate binding domain NIES4071_34110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_34140 PF07722 Peptidase C26 NIES4071_34150 PF00106 short chain dehydrogenase NIES4071_34160 PF02547 Queuosine biosynthesis protein NIES4071_34320 PF00931 NB-ARC domain NIES4071_34320 PF00400 WD domain, G-beta repeat NIES4071_34330 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NIES4071_34330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIES4071_34380 PF00732 GMC oxidoreductase NIES4071_34380 PF05199 GMC oxidoreductase NIES4071_34400 PF00248 Aldo/keto reductase family NIES4071_34450 PF00892 EamA-like transporter family NIES4071_34470 PF00106 short chain dehydrogenase NIES4071_34480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_34520 PF00578 AhpC/TSA family NIES4071_34530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_34530 PF03466 LysR substrate binding domain NIES4071_34540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_34540 PF03466 LysR substrate binding domain NIES4071_34550 PF02525 Flavodoxin-like fold NIES4071_34560 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_34560 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_34560 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_34560 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_34560 PF08659 KR domain NIES4071_34560 PF14765 Polyketide synthase dehydratase NIES4071_34560 PF00550 Phosphopantetheine attachment site NIES4071_34560 PF00698 Acyl transferase domain NIES4071_34580 PF00440 Bacterial regulatory proteins, tetR family NIES4071_34580 PF16859 Tetracyclin repressor-like, C-terminal domain NIES4071_34620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIES4071_34620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NIES4071_34650 PF00106 short chain dehydrogenase NIES4071_34680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_34680 PF03466 LysR substrate binding domain NIES4071_34710 PF00698 Acyl transferase domain NIES4071_34710 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_34710 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_34710 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_34710 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_34710 PF08659 KR domain NIES4071_34710 PF14765 Polyketide synthase dehydratase NIES4071_34710 PF00550 Phosphopantetheine attachment site NIES4071_34750 PF00698 Acyl transferase domain NIES4071_34750 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_34750 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_34750 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_34750 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_34750 PF08659 KR domain NIES4071_34750 PF00550 Phosphopantetheine attachment site NIES4071_34750 PF14765 Polyketide synthase dehydratase NIES4071_34760 PF06441 Epoxide hydrolase N terminus NIES4071_34780 PF12833 Helix-turn-helix domain NIES4071_34820 PF00072 Response regulator receiver domain NIES4071_34880 PF06772 Bacterial low temperature requirement A protein (LtrA) NIES4071_34920 PF00400 WD domain, G-beta repeat NIES4071_34920 PF00931 NB-ARC domain NIES4071_34940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_34950 PF00561 alpha/beta hydrolase fold NIES4071_35000 PF00561 alpha/beta hydrolase fold NIES4071_35020 PF00107 Zinc-binding dehydrogenase NIES4071_35020 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_35030 PF01638 HxlR-like helix-turn-helix NIES4071_35050 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_35050 PF08448 PAS fold NIES4071_35100 PF04304 Protein of unknown function (DUF454) NIES4071_35130 PF00690 Cation transporter/ATPase, N-terminus NIES4071_35130 PF00689 Cation transporting ATPase, C-terminus NIES4071_35140 PF00484 Carbonic anhydrase NIES4071_35210 PF02195 ParB-like nuclease domain NIES4071_35210 PF17762 HTH domain found in ParB protein NIES4071_35220 PF00403 Heavy-metal-associated domain NIES4071_35230 PF00069 Protein kinase domain NIES4071_35230 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_35250 PF00403 Heavy-metal-associated domain NIES4071_35260 PF00582 Universal stress protein family NIES4071_35270 PF01699 Sodium/calcium exchanger protein NIES4071_35280 PF01699 Sodium/calcium exchanger protein NIES4071_35300 PF00689 Cation transporting ATPase, C-terminus NIES4071_35300 PF00690 Cation transporter/ATPase, N-terminus NIES4071_35320 PF03109 ABC1 family NIES4071_35390 PF00535 Glycosyl transferase family 2 NIES4071_35400 PF00535 Glycosyl transferase family 2 NIES4071_35410 PF00005 ABC transporter NIES4071_35410 PF00664 ABC transporter transmembrane region NIES4071_35420 PF00535 Glycosyl transferase family 2 NIES4071_35430 PF01699 Sodium/calcium exchanger protein NIES4071_35440 PF10518 TAT (twin-arginine translocation) pathway signal sequence NIES4071_35440 PF01799 [2Fe-2S] binding domain NIES4071_35440 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_35450 PF03450 CO dehydrogenase flavoprotein C-terminal domain NIES4071_35450 PF00941 FAD binding domain in molybdopterin dehydrogenase NIES4071_35460 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NIES4071_35460 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIES4071_35470 PF00106 short chain dehydrogenase NIES4071_35490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NIES4071_35490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIES4071_35500 PF13492 GAF domain NIES4071_35500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_35500 PF07730 Histidine kinase NIES4071_35510 PF00196 Bacterial regulatory proteins, luxR family NIES4071_35510 PF00072 Response regulator receiver domain NIES4071_35520 PF07690 Major Facilitator Superfamily NIES4071_35530 PF12833 Helix-turn-helix domain NIES4071_35590 PF00561 alpha/beta hydrolase fold NIES4071_35600 PF00561 alpha/beta hydrolase fold NIES4071_35630 PF12805 FUSC-like inner membrane protein yccS NIES4071_35640 PF02625 XdhC and CoxI family NIES4071_35640 PF13478 XdhC Rossmann domain NIES4071_35660 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_35660 PF00355 Rieske [2Fe-2S] domain NIES4071_35670 PF02195 ParB-like nuclease domain NIES4071_35780 PF01494 FAD binding domain NIES4071_35800 PF08485 Polysaccharide biosynthesis protein C-terminal NIES4071_35800 PF02719 Polysaccharide biosynthesis protein NIES4071_35810 PF00067 Cytochrome P450 NIES4071_35820 PF00355 Rieske [2Fe-2S] domain NIES4071_35850 PF00248 Aldo/keto reductase family NIES4071_35880 PF02469 Fasciclin domain NIES4071_35910 PF07722 Peptidase C26 NIES4071_35930 PF00248 Aldo/keto reductase family NIES4071_35960 PF12833 Helix-turn-helix domain NIES4071_35960 PF02311 AraC-like ligand binding domain NIES4071_35990 PF12833 Helix-turn-helix domain NIES4071_36030 PF00561 alpha/beta hydrolase fold NIES4071_36050 PF01545 Cation efflux family NIES4071_36050 PF16916 Dimerisation domain of Zinc Transporter NIES4071_36100 PF00106 short chain dehydrogenase NIES4071_36120 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_36120 PF00043 Glutathione S-transferase, C-terminal domain NIES4071_36130 PF00106 short chain dehydrogenase NIES4071_36310 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_36310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_36310 PF00672 HAMP domain NIES4071_36310 PF00989 PAS fold NIES4071_36320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_36360 PF07690 Major Facilitator Superfamily NIES4071_36380 PF07690 Major Facilitator Superfamily NIES4071_36390 PF12833 Helix-turn-helix domain NIES4071_36390 PF02311 AraC-like ligand binding domain NIES4071_36410 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_36410 PF00107 Zinc-binding dehydrogenase NIES4071_36420 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIES4071_36420 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NIES4071_36430 PF00941 FAD binding domain in molybdopterin dehydrogenase NIES4071_36430 PF03450 CO dehydrogenase flavoprotein C-terminal domain NIES4071_36440 PF01799 [2Fe-2S] binding domain NIES4071_36440 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_36470 PF01152 Bacterial-like globin NIES4071_36480 PF01738 Dienelactone hydrolase family NIES4071_36500 PF02333 Phytase NIES4071_36610 PF01624 MutS domain I NIES4071_36610 PF05192 MutS domain III NIES4071_36610 PF05190 MutS family domain IV NIES4071_36610 PF05188 MutS domain II NIES4071_36610 PF00488 MutS domain V NIES4071_36650 PF00248 Aldo/keto reductase family NIES4071_36660 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_36860 PF16450 Proteasomal ATPase OB C-terminal domain NIES4071_36860 PF17758 Proteasomal ATPase OB N-terminal domain NIES4071_36860 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_36960 PF01425 Amidase NIES4071_36970 PF03040 CemA family NIES4071_36980 PF00484 Carbonic anhydrase NIES4071_36990 PF01980 tRNA-methyltransferase O NIES4071_36990 PF18389 TrmO C-terminal domain NIES4071_37020 PF01494 FAD binding domain NIES4071_37080 PF01590 GAF domain NIES4071_37080 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_37080 PF08446 PAS fold NIES4071_37080 PF00360 Phytochrome region NIES4071_37080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_37090 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_37090 PF08446 PAS fold NIES4071_37090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_37090 PF01590 GAF domain NIES4071_37090 PF00360 Phytochrome region NIES4071_37100 PF00072 Response regulator receiver domain NIES4071_37110 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_37110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_37230 PF08450 SMP-30/Gluconolactonase/LRE-like region NIES4071_37240 PF12323 Helix-turn-helix domain NIES4071_37240 PF01385 Probable transposase NIES4071_37240 PF07282 Putative transposase DNA-binding domain NIES4071_37330 PF00583 Acetyltransferase (GNAT) family NIES4071_37360 PF12849 PBP superfamily domain NIES4071_37370 PF00069 Protein kinase domain NIES4071_37420 PF00005 ABC transporter NIES4071_37430 PF00005 ABC transporter NIES4071_37460 PF00106 short chain dehydrogenase NIES4071_37650 PF01568 Molydopterin dinucleotide binding domain NIES4071_37650 PF00384 Molybdopterin oxidoreductase NIES4071_37650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIES4071_37660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_37660 PF00072 Response regulator receiver domain NIES4071_37660 PF13188 PAS domain NIES4071_37660 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_37660 PF08448 PAS fold NIES4071_37670 PF00072 Response regulator receiver domain NIES4071_37680 PF00360 Phytochrome region NIES4071_37680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_37680 PF08446 PAS fold NIES4071_37680 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_37680 PF01590 GAF domain NIES4071_37740 PF02585 GlcNAc-PI de-N-acetylase NIES4071_37770 PF00069 Protein kinase domain NIES4071_37780 PF05729 NACHT domain NIES4071_37780 PF00805 Pentapeptide repeats (8 copies) NIES4071_37780 PF00400 WD domain, G-beta repeat NIES4071_37800 PF01842 ACT domain NIES4071_37800 PF00551 Formyl transferase NIES4071_37810 PF01842 ACT domain NIES4071_37810 PF00551 Formyl transferase NIES4071_37820 PF00106 short chain dehydrogenase NIES4071_37830 PF16254 Domain of unknown function (DUF4910) NIES4071_37830 PF16221 winged helix-turn-helix NIES4071_37830 PF09940 Domain of unknown function (DUF2172) NIES4071_37840 PF04304 Protein of unknown function (DUF454) NIES4071_37860 PF04389 Peptidase family M28 NIES4071_37880 PF00248 Aldo/keto reductase family NIES4071_37890 PF02577 Bifunctional nuclease NIES4071_37900 PF00677 Lumazine binding domain NIES4071_37910 PF01551 Peptidase family M23 NIES4071_37910 PF10145 Phage-related minor tail protein NIES4071_37910 PF01464 Transglycosylase SLT domain NIES4071_37920 PF03099 Biotin/lipoate A/B protein ligase family NIES4071_37920 PF02237 Biotin protein ligase C terminal domain NIES4071_37930 PF02806 Alpha amylase, C-terminal all-beta domain NIES4071_37930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIES4071_37930 PF00128 Alpha amylase, catalytic domain NIES4071_37960 PF00069 Protein kinase domain NIES4071_37960 PF08239 Bacterial SH3 domain NIES4071_38040 PF01979 Amidohydrolase family NIES4071_38100 PF02728 Copper amine oxidase, N3 domain NIES4071_38100 PF01179 Copper amine oxidase, enzyme domain NIES4071_38110 PF00067 Cytochrome P450 NIES4071_38120 PF00067 Cytochrome P450 NIES4071_38160 PF00106 short chain dehydrogenase NIES4071_38170 PF00067 Cytochrome P450 NIES4071_38190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NIES4071_38190 PF13378 Enolase C-terminal domain-like NIES4071_38220 PF00535 Glycosyl transferase family 2 NIES4071_38230 PF01522 Polysaccharide deacetylase NIES4071_38230 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NIES4071_38240 PF02657 Fe-S metabolism associated domain NIES4071_38260 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES4071_38260 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_38300 PF01297 Zinc-uptake complex component A periplasmic NIES4071_38320 PF16363 GDP-mannose 4,6 dehydratase NIES4071_38330 PF13439 Glycosyltransferase Family 4 NIES4071_38330 PF00534 Glycosyl transferases group 1 NIES4071_38340 PF02397 Bacterial sugar transferase NIES4071_38360 PF16363 GDP-mannose 4,6 dehydratase NIES4071_38370 PF01370 NAD dependent epimerase/dehydratase family NIES4071_38400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIES4071_38400 PF01926 50S ribosome-binding GTPase NIES4071_38490 PF03459 TOBE domain NIES4071_38500 PF13545 Crp-like helix-turn-helix domain NIES4071_38510 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_38520 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_38530 PF00355 Rieske [2Fe-2S] domain NIES4071_38560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES4071_38560 PF13806 Rieske-like [2Fe-2S] domain NIES4071_38560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES4071_38560 PF18267 Rubredoxin NAD+ reductase C-terminal domain NIES4071_38560 PF04324 BFD-like [2Fe-2S] binding domain NIES4071_38560 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_38660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIES4071_38660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NIES4071_38680 PF03793 PASTA domain NIES4071_38680 PF00069 Protein kinase domain NIES4071_38720 PF00892 EamA-like transporter family NIES4071_38740 PF01810 LysE type translocator NIES4071_38800 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_38800 PF08448 PAS fold NIES4071_38800 PF13426 PAS domain NIES4071_38800 PF00072 Response regulator receiver domain NIES4071_38800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_38860 PF00534 Glycosyl transferases group 1 NIES4071_38860 PF13439 Glycosyltransferase Family 4 NIES4071_38880 PF00032 Cytochrome b(C-terminal)/b6/petD NIES4071_38900 PF03572 Peptidase family S41 NIES4071_38900 PF00595 PDZ domain NIES4071_38960 PF09367 CpeS-like protein NIES4071_39000 PF00156 Phosphoribosyl transferase domain NIES4071_39040 PF00072 Response regulator receiver domain NIES4071_39040 PF00486 Transcriptional regulatory protein, C terminal NIES4071_39050 PF16736 Single Cache-like NIES4071_39050 PF00989 PAS fold NIES4071_39050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_39050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_39070 PF13180 PDZ domain NIES4071_39080 PF00072 Response regulator receiver domain NIES4071_39080 PF13426 PAS domain NIES4071_39080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_39140 PF18152 DAHP synthase ferredoxin-like domain NIES4071_39140 PF00793 DAHP synthetase I family NIES4071_39160 PF00312 Ribosomal protein S15 NIES4071_39170 PF01627 Hpt domain NIES4071_39170 PF00486 Transcriptional regulatory protein, C terminal NIES4071_39170 PF00072 Response regulator receiver domain NIES4071_39180 PF00672 HAMP domain NIES4071_39180 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_39180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_39180 PF18698 Histidine kinase sensor domain NIES4071_39190 PF00486 Transcriptional regulatory protein, C terminal NIES4071_39190 PF00072 Response regulator receiver domain NIES4071_39200 PF00486 Transcriptional regulatory protein, C terminal NIES4071_39200 PF00072 Response regulator receiver domain NIES4071_39220 PF11941 Domain of unknown function (DUF3459) NIES4071_39220 PF00128 Alpha amylase, catalytic domain NIES4071_39250 PF02875 Mur ligase family, glutamate ligase domain NIES4071_39250 PF08443 RimK-like ATP-grasp domain NIES4071_39250 PF08245 Mur ligase middle domain NIES4071_39260 PF00128 Alpha amylase, catalytic domain NIES4071_39260 PF11941 Domain of unknown function (DUF3459) NIES4071_39290 PF00708 Acylphosphatase NIES4071_39300 PF00557 Metallopeptidase family M24 NIES4071_39310 PF00675 Insulinase (Peptidase family M16) NIES4071_39310 PF05193 Peptidase M16 inactive domain NIES4071_39340 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_39360 PF02875 Mur ligase family, glutamate ligase domain NIES4071_39360 PF08245 Mur ligase middle domain NIES4071_39370 PF07690 Major Facilitator Superfamily NIES4071_39460 PF03958 Bacterial type II/III secretion system short domain NIES4071_39460 PF00263 Bacterial type II and III secretion system protein NIES4071_39540 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_39540 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES4071_39570 PF01523 Putative modulator of DNA gyrase NIES4071_39750 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NIES4071_39760 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NIES4071_39780 PF07690 Major Facilitator Superfamily NIES4071_39830 PF00391 PEP-utilising enzyme, mobile domain NIES4071_39830 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES4071_39880 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_39890 PF00005 ABC transporter NIES4071_39900 PF00005 ABC transporter NIES4071_39930 PF16745 RsgA N-terminal domain NIES4071_39930 PF03193 RsgA GTPase NIES4071_39950 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_39950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_39960 PF00762 Ferrochelatase NIES4071_39970 PF00762 Ferrochelatase NIES4071_39980 PF00762 Ferrochelatase NIES4071_39990 PF00762 Ferrochelatase NIES4071_40020 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_40040 PF01580 FtsK/SpoIIIE family NIES4071_40120 PF18665 Tetracyclin repressor-like, C-terminal domain NIES4071_40120 PF00440 Bacterial regulatory proteins, tetR family NIES4071_40130 PF00893 Small Multidrug Resistance protein NIES4071_40150 PF13439 Glycosyltransferase Family 4 NIES4071_40170 PF01161 Phosphatidylethanolamine-binding protein NIES4071_40180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIES4071_40180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NIES4071_40250 PF00440 Bacterial regulatory proteins, tetR family NIES4071_40250 PF17926 Tetracyclin repressor-like, C-terminal domain NIES4071_40260 PF00067 Cytochrome P450 NIES4071_40290 PF09924 Uncharacterised conserved protein (DUF2156) NIES4071_40290 PF03706 Lysylphosphatidylglycerol synthase TM region NIES4071_40340 PF03706 Lysylphosphatidylglycerol synthase TM region NIES4071_40350 PF13840 ACT domain NIES4071_40350 PF00696 Amino acid kinase family NIES4071_40360 PF03330 Lytic transglycolase NIES4071_40380 PF02567 Phenazine biosynthesis-like protein NIES4071_40390 PF01593 Flavin containing amine oxidoreductase NIES4071_40430 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES4071_40470 PF04932 O-Antigen ligase NIES4071_40480 PF13614 AAA domain NIES4071_40530 PF01555 DNA methylase NIES4071_40550 PF00877 NlpC/P60 family NIES4071_40560 PF00535 Glycosyl transferase family 2 NIES4071_40570 PF07690 Major Facilitator Superfamily NIES4071_40590 PF01967 MoaC family NIES4071_40660 PF11378 Protein of unknown function (DUF3181) NIES4071_40720 PF17954 Quercetinase C-terminal cupin domain NIES4071_40720 PF02678 Pirin NIES4071_40730 PF00210 Ferritin-like domain NIES4071_40750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_40760 PF01467 Cytidylyltransferase-like NIES4071_40760 PF00294 pfkB family carbohydrate kinase NIES4071_40770 PF00459 Inositol monophosphatase family NIES4071_40780 PF06472 ABC transporter transmembrane region 2 NIES4071_40780 PF00005 ABC transporter NIES4071_40840 PF07286 Protein of unknown function (DUF1445) NIES4071_40850 PF08148 DSHCT (NUC185) domain NIES4071_40850 PF00270 DEAD/DEAH box helicase NIES4071_40850 PF00271 Helicase conserved C-terminal domain NIES4071_40860 PF00069 Protein kinase domain NIES4071_40880 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_40880 PF17866 AAA lid domain NIES4071_40950 PF00850 Histone deacetylase domain NIES4071_40970 PF00521 DNA gyrase/topoisomerase IV, subunit A NIES4071_40970 PF03989 DNA gyrase C-terminal domain, beta-propeller NIES4071_40980 PF00795 Carbon-nitrogen hydrolase NIES4071_41000 PF00232 Glycosyl hydrolase family 1 NIES4071_41060 PF00196 Bacterial regulatory proteins, luxR family NIES4071_41060 PF00072 Response regulator receiver domain NIES4071_41090 PF03330 Lytic transglycolase NIES4071_41100 PF06628 Catalase-related immune-responsive NIES4071_41100 PF00199 Catalase NIES4071_41100 PF18011 C-terminal domain found in long catalases NIES4071_41130 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NIES4071_41150 PF00654 Voltage gated chloride channel NIES4071_41170 PF02082 Transcriptional regulator NIES4071_41180 PF03186 CobD/Cbib protein NIES4071_41190 PF00156 Phosphoribosyl transferase domain NIES4071_41220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_41220 PF13188 PAS domain NIES4071_41220 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_41220 PF00072 Response regulator receiver domain NIES4071_41220 PF08448 PAS fold NIES4071_41230 PF00072 Response regulator receiver domain NIES4071_41240 PF00360 Phytochrome region NIES4071_41240 PF01590 GAF domain NIES4071_41240 PF08446 PAS fold NIES4071_41240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_41240 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_41250 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_41250 PF00072 Response regulator receiver domain NIES4071_41250 PF13188 PAS domain NIES4071_41250 PF08448 PAS fold NIES4071_41250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_41260 PF02391 MoaE protein NIES4071_41330 PF08032 RNA 2'-O ribose methyltransferase substrate binding NIES4071_41330 PF00588 SpoU rRNA Methylase family NIES4071_41340 PF00563 EAL domain NIES4071_41340 PF03707 Bacterial signalling protein N terminal repeat NIES4071_41340 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_41350 PF01169 Uncharacterized protein family UPF0016 NIES4071_41410 PF00873 AcrB/AcrD/AcrF family NIES4071_41420 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_41420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_41440 PF12911 N-terminal TM domain of oligopeptide transport permease C NIES4071_41440 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_41480 PF01841 Transglutaminase-like superfamily NIES4071_41490 PF00689 Cation transporting ATPase, C-terminus NIES4071_41490 PF00690 Cation transporter/ATPase, N-terminus NIES4071_41500 PF02463 RecF/RecN/SMC N terminal domain NIES4071_41520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES4071_41520 PF02896 PEP-utilising enzyme, TIM barrel domain NIES4071_41520 PF00391 PEP-utilising enzyme, mobile domain NIES4071_41560 PF04966 Carbohydrate-selective porin, OprB family NIES4071_41570 PF03572 Peptidase family S41 NIES4071_41570 PF00595 PDZ domain NIES4071_41580 PF07730 Histidine kinase NIES4071_41590 PF00072 Response regulator receiver domain NIES4071_41590 PF00196 Bacterial regulatory proteins, luxR family NIES4071_41690 PF01850 PIN domain NIES4071_41730 PF00400 WD domain, G-beta repeat NIES4071_41770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_41770 PF01348 Type II intron maturase NIES4071_41780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_41780 PF01348 Type II intron maturase NIES4071_41800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_41870 PF03050 Transposase IS66 family NIES4071_41910 PF01551 Peptidase family M23 NIES4071_41910 PF01476 LysM domain NIES4071_41930 PF00588 SpoU rRNA Methylase family NIES4071_41940 PF04107 Glutamate-cysteine ligase family 2(GCS2) NIES4071_41950 PF00850 Histone deacetylase domain NIES4071_42020 PF01979 Amidohydrolase family NIES4071_42030 PF00857 Isochorismatase family NIES4071_42120 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_42120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_42120 PF01627 Hpt domain NIES4071_42120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_42120 PF00072 Response regulator receiver domain NIES4071_42120 PF00672 HAMP domain NIES4071_42130 PF04485 Phycobilisome degradation protein nblA NIES4071_42170 PF08502 LeuA allosteric (dimerisation) domain NIES4071_42170 PF00682 HMGL-like NIES4071_42290 PF01156 Inosine-uridine preferring nucleoside hydrolase NIES4071_42300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIES4071_42300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NIES4071_42330 PF08448 PAS fold NIES4071_42330 PF08447 PAS fold NIES4071_42330 PF00563 EAL domain NIES4071_42330 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_42340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NIES4071_42360 PF00072 Response regulator receiver domain NIES4071_42360 PF01627 Hpt domain NIES4071_42360 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_42360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_42360 PF00672 HAMP domain NIES4071_42360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_42370 PF00672 HAMP domain NIES4071_42370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_42370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_42370 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_42370 PF00072 Response regulator receiver domain NIES4071_42370 PF01627 Hpt domain NIES4071_42380 PF03705 CheR methyltransferase, all-alpha domain NIES4071_42380 PF08448 PAS fold NIES4071_42380 PF01339 CheB methylesterase NIES4071_42380 PF01739 CheR methyltransferase, SAM binding domain NIES4071_42390 PF01339 CheB methylesterase NIES4071_42400 PF01339 CheB methylesterase NIES4071_42400 PF00072 Response regulator receiver domain NIES4071_42410 PF00561 alpha/beta hydrolase fold NIES4071_42430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIES4071_42430 PF00005 ABC transporter NIES4071_42470 PF00069 Protein kinase domain NIES4071_42470 PF03793 PASTA domain NIES4071_42510 PF00069 Protein kinase domain NIES4071_42510 PF03793 PASTA domain NIES4071_42560 PF06206 CpeT/CpcT family (DUF1001) NIES4071_42590 PF00534 Glycosyl transferases group 1 NIES4071_42600 PF00106 short chain dehydrogenase NIES4071_42610 PF00732 GMC oxidoreductase NIES4071_42610 PF05199 GMC oxidoreductase NIES4071_42620 PF00271 Helicase conserved C-terminal domain NIES4071_42620 PF00270 DEAD/DEAH box helicase NIES4071_42690 PF13439 Glycosyltransferase Family 4 NIES4071_42690 PF00534 Glycosyl transferases group 1 NIES4071_42720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_42720 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_42730 PF17762 HTH domain found in ParB protein NIES4071_42730 PF02195 ParB-like nuclease domain NIES4071_42750 PF00550 Phosphopantetheine attachment site NIES4071_42750 PF08659 KR domain NIES4071_42750 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_42750 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_42750 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_42750 PF14765 Polyketide synthase dehydratase NIES4071_42750 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_42750 PF00698 Acyl transferase domain NIES4071_42770 PF00550 Phosphopantetheine attachment site NIES4071_42770 PF08659 KR domain NIES4071_42770 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_42770 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_42770 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_42770 PF00668 Condensation domain NIES4071_42770 PF13193 AMP-binding enzyme C-terminal domain NIES4071_42770 PF00501 AMP-binding enzyme NIES4071_42770 PF14765 Polyketide synthase dehydratase NIES4071_42780 PF00550 Phosphopantetheine attachment site NIES4071_42780 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_42780 PF08659 KR domain NIES4071_42780 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_42780 PF00698 Acyl transferase domain NIES4071_42780 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_42790 PF03060 Nitronate monooxygenase NIES4071_42790 PF00698 Acyl transferase domain NIES4071_42800 PF07993 Male sterility protein NIES4071_42800 PF00550 Phosphopantetheine attachment site NIES4071_42840 PF01648 4'-phosphopantetheinyl transferase superfamily NIES4071_42900 PF05067 Manganese containing catalase NIES4071_42910 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NIES4071_42920 PF00083 Sugar (and other) transporter NIES4071_42930 PF00686 Starch binding domain NIES4071_42930 PF00128 Alpha amylase, catalytic domain NIES4071_43030 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_43030 PF08448 PAS fold NIES4071_43030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_43030 PF13426 PAS domain NIES4071_43030 PF00072 Response regulator receiver domain NIES4071_43070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NIES4071_43100 PF00931 NB-ARC domain NIES4071_43100 PF00400 WD domain, G-beta repeat NIES4071_43120 PF12833 Helix-turn-helix domain NIES4071_43120 PF02311 AraC-like ligand binding domain NIES4071_43150 PF00639 PPIC-type PPIASE domain NIES4071_43150 PF09312 SurA N-terminal domain NIES4071_43250 PF00664 ABC transporter transmembrane region NIES4071_43250 PF03412 Peptidase C39 family NIES4071_43250 PF00005 ABC transporter NIES4071_43320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_43330 PF02687 FtsX-like permease family NIES4071_43330 PF12704 MacB-like periplasmic core domain NIES4071_43330 PF00005 ABC transporter NIES4071_43510 PF00245 Alkaline phosphatase NIES4071_43640 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_43650 PF02384 N-6 DNA Methylase NIES4071_43650 PF12161 HsdM N-terminal domain NIES4071_43670 PF01471 Putative peptidoglycan binding domain NIES4071_43670 PF01183 Glycosyl hydrolases family 25 NIES4071_43680 PF08502 LeuA allosteric (dimerisation) domain NIES4071_43680 PF00682 HMGL-like NIES4071_43690 PF13409 Glutathione S-transferase, N-terminal domain NIES4071_43790 PF00805 Pentapeptide repeats (8 copies) NIES4071_43790 PF00069 Protein kinase domain NIES4071_43800 PF00069 Protein kinase domain NIES4071_43940 PF00092 von Willebrand factor type A domain NIES4071_44030 PF01183 Glycosyl hydrolases family 25 NIES4071_44100 PF00931 NB-ARC domain NIES4071_44100 PF00400 WD domain, G-beta repeat NIES4071_44120 PF00400 WD domain, G-beta repeat NIES4071_44120 PF00931 NB-ARC domain NIES4071_44130 PF02469 Fasciclin domain NIES4071_44300 PF00266 Aminotransferase class-V NIES4071_44330 PF00069 Protein kinase domain NIES4071_44380 PF01434 Peptidase family M41 NIES4071_44380 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_44380 PF06480 FtsH Extracellular NIES4071_44380 PF17862 AAA+ lid domain NIES4071_44430 PF00072 Response regulator receiver domain NIES4071_44440 PF00072 Response regulator receiver domain NIES4071_44440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_44440 PF00672 HAMP domain NIES4071_44440 PF17149 Periplasmic sensor domain found in signal transduction proteins NIES4071_44440 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_44440 PF01627 Hpt domain NIES4071_44460 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_44500 PF09367 CpeS-like protein NIES4071_44520 PF02405 Permease MlaE NIES4071_44550 PF00128 Alpha amylase, catalytic domain NIES4071_44550 PF09154 Domain of unknown function (DUF1939) NIES4071_44570 PF13302 Acetyltransferase (GNAT) domain NIES4071_44610 PF00361 Proton-conducting membrane transporter NIES4071_44620 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NIES4071_44620 PF00361 Proton-conducting membrane transporter NIES4071_44620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NIES4071_44640 PF00535 Glycosyl transferase family 2 NIES4071_44650 PF00005 ABC transporter NIES4071_44670 PF00535 Glycosyl transferase family 2 NIES4071_44680 PF13439 Glycosyltransferase Family 4 NIES4071_44680 PF00534 Glycosyl transferases group 1 NIES4071_44740 PF04255 Protein of unknown function (DUF433) NIES4071_44810 PF00923 Transaldolase/Fructose-6-phosphate aldolase NIES4071_44830 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NIES4071_44830 PF09364 XFP N-terminal domain NIES4071_44830 PF09363 XFP C-terminal domain NIES4071_44890 PF00155 Aminotransferase class I and II NIES4071_44900 PF00107 Zinc-binding dehydrogenase NIES4071_44900 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_44950 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_44950 PF00043 Glutathione S-transferase, C-terminal domain NIES4071_44980 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_44980 PF00043 Glutathione S-transferase, C-terminal domain NIES4071_45000 PF02653 Branched-chain amino acid transport system / permease component NIES4071_45020 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES4071_45020 PF00005 ABC transporter NIES4071_45030 PF00005 ABC transporter NIES4071_45040 PF00067 Cytochrome P450 NIES4071_45050 PF07714 Protein tyrosine kinase NIES4071_45080 PF00400 WD domain, G-beta repeat NIES4071_45100 PF02685 Glucokinase NIES4071_45140 PF00437 Type II/IV secretion system protein NIES4071_45160 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain NIES4071_45190 PF01339 CheB methylesterase NIES4071_45190 PF00072 Response regulator receiver domain NIES4071_45200 PF02503 Polyphosphate kinase middle domain NIES4071_45200 PF17941 Polyphosphate kinase C-terminal domain 1 NIES4071_45200 PF13089 Polyphosphate kinase N-terminal domain NIES4071_45200 PF13090 Polyphosphate kinase C-terminal domain 2 NIES4071_45210 PF00989 PAS fold NIES4071_45210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_45210 PF18698 Histidine kinase sensor domain NIES4071_45210 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_45210 PF00672 HAMP domain NIES4071_45240 PF00005 ABC transporter NIES4071_45240 PF00664 ABC transporter transmembrane region NIES4071_45280 PF00248 Aldo/keto reductase family NIES4071_45300 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_45300 PF00698 Acyl transferase domain NIES4071_45300 PF08659 KR domain NIES4071_45300 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_45300 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_45300 PF00550 Phosphopantetheine attachment site NIES4071_45300 PF14765 Polyketide synthase dehydratase NIES4071_45300 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_45310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_45310 PF03466 LysR substrate binding domain NIES4071_45450 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_45470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NIES4071_45470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NIES4071_45480 PF03450 CO dehydrogenase flavoprotein C-terminal domain NIES4071_45480 PF00941 FAD binding domain in molybdopterin dehydrogenase NIES4071_45490 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_45490 PF10518 TAT (twin-arginine translocation) pathway signal sequence NIES4071_45490 PF01799 [2Fe-2S] binding domain NIES4071_45510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES4071_45510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES4071_45540 PF03091 CutA1 divalent ion tolerance protein NIES4071_45670 PF02403 Seryl-tRNA synthetase N-terminal domain NIES4071_45670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES4071_45680 PF02163 Peptidase family M50 NIES4071_45680 PF13180 PDZ domain NIES4071_45690 PF00633 Helix-hairpin-helix motif NIES4071_45690 PF00730 HhH-GPD superfamily base excision DNA repair protein NIES4071_45750 PF00561 alpha/beta hydrolase fold NIES4071_45780 PF00360 Phytochrome region NIES4071_45780 PF08446 PAS fold NIES4071_45780 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_45780 PF01590 GAF domain NIES4071_45780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_45870 PF00069 Protein kinase domain NIES4071_45870 PF03793 PASTA domain NIES4071_45890 PF00690 Cation transporter/ATPase, N-terminus NIES4071_45890 PF00689 Cation transporting ATPase, C-terminus NIES4071_45910 PF01032 FecCD transport family NIES4071_45920 PF00005 ABC transporter NIES4071_45950 PF00005 ABC transporter NIES4071_45960 PF01497 Periplasmic binding protein NIES4071_46010 PF00072 Response regulator receiver domain NIES4071_46010 PF00486 Transcriptional regulatory protein, C terminal NIES4071_46030 PF03050 Transposase IS66 family NIES4071_46050 PF00072 Response regulator receiver domain NIES4071_46050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_46050 PF09308 LuxQ, periplasmic NIES4071_46050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_46080 PF01551 Peptidase family M23 NIES4071_46080 PF04225 Opacity-associated protein A LysM-like domain NIES4071_46100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES4071_46100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES4071_46200 PF02517 CPBP intramembrane metalloprotease NIES4071_46210 PF13417 Glutathione S-transferase, N-terminal domain NIES4071_46240 PF00440 Bacterial regulatory proteins, tetR family NIES4071_46290 PF01022 Bacterial regulatory protein, arsR family NIES4071_46360 PF07465 Photosystem I protein M (PsaM) NIES4071_46370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NIES4071_46380 PF01202 Shikimate kinase NIES4071_46390 PF00400 WD domain, G-beta repeat NIES4071_46390 PF00931 NB-ARC domain NIES4071_46420 PF02441 Flavoprotein NIES4071_46430 PF08206 Ribonuclease B OB domain NIES4071_46430 PF17876 Cold shock domain NIES4071_46430 PF00575 S1 RNA binding domain NIES4071_46430 PF00773 RNB domain NIES4071_46460 PF03190 Protein of unknown function, DUF255 NIES4071_46470 PF12804 MobA-like NTP transferase domain NIES4071_46480 PF10369 Small subunit of acetolactate synthase NIES4071_46490 PF02719 Polysaccharide biosynthesis protein NIES4071_46500 PF03023 Lipid II flippase MurJ NIES4071_46510 PF00535 Glycosyl transferase family 2 NIES4071_46520 PF00534 Glycosyl transferases group 1 NIES4071_46570 PF02397 Bacterial sugar transferase NIES4071_46590 PF01820 D-ala D-ala ligase N-terminus NIES4071_46590 PF07478 D-ala D-ala ligase C-terminus NIES4071_46620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIES4071_46650 PF00534 Glycosyl transferases group 1 NIES4071_46650 PF13439 Glycosyltransferase Family 4 NIES4071_46660 PF13614 AAA domain NIES4071_46690 PF02384 N-6 DNA Methylase NIES4071_46690 PF12161 HsdM N-terminal domain NIES4071_46700 PF01420 Type I restriction modification DNA specificity domain NIES4071_46720 PF12728 Helix-turn-helix domain NIES4071_46760 PF08463 EcoEI R protein C-terminal NIES4071_46760 PF04851 Type III restriction enzyme, res subunit NIES4071_46760 PF00271 Helicase conserved C-terminal domain NIES4071_46760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIES4071_46860 PF13579 Glycosyl transferase 4-like domain NIES4071_46860 PF00534 Glycosyl transferases group 1 NIES4071_46880 PF01435 Peptidase family M48 NIES4071_46890 PF16658 Class II release factor RF3, C-terminal domain NIES4071_46890 PF00009 Elongation factor Tu GTP binding domain NIES4071_46910 PF00490 Delta-aminolevulinic acid dehydratase NIES4071_46970 PF00069 Protein kinase domain NIES4071_47010 PF03965 Penicillinase repressor NIES4071_47070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NIES4071_47070 PF12706 Beta-lactamase superfamily domain NIES4071_47110 PF01784 NIF3 (NGG1p interacting factor 3) NIES4071_47140 PF13673 Acetyltransferase (GNAT) domain NIES4071_47190 PF01702 Queuine tRNA-ribosyltransferase NIES4071_47220 PF05151 Photosystem II reaction centre M protein (PsbM) NIES4071_47230 PF00582 Universal stress protein family NIES4071_47270 PF01432 Peptidase family M3 NIES4071_47280 PF09587 Bacterial capsule synthesis protein PGA_cap NIES4071_47340 PF00400 WD domain, G-beta repeat NIES4071_47360 PF11897 Protein of unknown function (DUF3417) NIES4071_47360 PF00343 Carbohydrate phosphorylase NIES4071_47410 PF00561 alpha/beta hydrolase fold NIES4071_47420 PF00056 lactate/malate dehydrogenase, NAD binding domain NIES4071_47420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NIES4071_47500 PF17871 AAA lid domain NIES4071_47500 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_47500 PF07724 AAA domain (Cdc48 subfamily) NIES4071_47500 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_47500 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_47520 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_47560 PF00579 tRNA synthetases class I (W and Y) NIES4071_47570 PF02219 Methylenetetrahydrofolate reductase NIES4071_47570 PF02574 Homocysteine S-methyltransferase NIES4071_47620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_47620 PF01348 Type II intron maturase NIES4071_47780 PF00069 Protein kinase domain NIES4071_47790 PF00069 Protein kinase domain NIES4071_47820 PF03412 Peptidase C39 family NIES4071_47820 PF00005 ABC transporter NIES4071_47820 PF00664 ABC transporter transmembrane region NIES4071_47830 PF00582 Universal stress protein family NIES4071_47850 PF00150 Cellulase (glycosyl hydrolase family 5) NIES4071_47880 PF04561 RNA polymerase Rpb2, domain 2 NIES4071_47880 PF04560 RNA polymerase Rpb2, domain 7 NIES4071_47880 PF00562 RNA polymerase Rpb2, domain 6 NIES4071_47880 PF10385 RNA polymerase beta subunit external 1 domain NIES4071_47880 PF04565 RNA polymerase Rpb2, domain 3 NIES4071_47880 PF04563 RNA polymerase beta subunit NIES4071_47890 PF01026 TatD related DNase NIES4071_47900 PF01649 Ribosomal protein S20 NIES4071_47950 PF01270 Glycosyl hydrolases family 8 NIES4071_47970 PF00535 Glycosyl transferase family 2 NIES4071_47970 PF03552 Cellulose synthase NIES4071_47970 PF07238 PilZ domain NIES4071_48000 PF00005 ABC transporter NIES4071_48000 PF00664 ABC transporter transmembrane region NIES4071_48000 PF03412 Peptidase C39 family NIES4071_48070 PF02016 LD-carboxypeptidase N-terminal domain NIES4071_48070 PF17676 LD-carboxypeptidase C-terminal domain NIES4071_48100 PF00326 Prolyl oligopeptidase family NIES4071_48100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NIES4071_48120 PF02938 GAD domain NIES4071_48120 PF01336 OB-fold nucleic acid binding domain NIES4071_48120 PF00152 tRNA synthetases class II (D, K and N) NIES4071_48170 PF00270 DEAD/DEAH box helicase NIES4071_48170 PF18019 HD domain NIES4071_48170 PF00271 Helicase conserved C-terminal domain NIES4071_48280 PF01867 CRISPR associated protein Cas1 NIES4071_48290 PF09827 CRISPR associated protein Cas2 NIES4071_48300 PF00011 Hsp20/alpha crystallin family NIES4071_48320 PF00248 Aldo/keto reductase family NIES4071_48340 PF00011 Hsp20/alpha crystallin family NIES4071_48350 PF13409 Glutathione S-transferase, N-terminal domain NIES4071_48380 PF02686 Glu-tRNAGln amidotransferase C subunit NIES4071_48390 PF00515 Tetratricopeptide repeat NIES4071_48400 PF02586 SOS response associated peptidase (SRAP) NIES4071_48410 PF14497 Glutathione S-transferase, C-terminal domain NIES4071_48410 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_48460 PF01814 Hemerythrin HHE cation binding domain NIES4071_48470 PF07687 Peptidase dimerisation domain NIES4071_48470 PF01546 Peptidase family M20/M25/M40 NIES4071_48480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_48480 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_48480 PF08448 PAS fold NIES4071_48480 PF13188 PAS domain NIES4071_48480 PF00072 Response regulator receiver domain NIES4071_48490 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_48490 PF01627 Hpt domain NIES4071_48490 PF00989 PAS fold NIES4071_48490 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_48490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_48490 PF00072 Response regulator receiver domain NIES4071_48510 PF01596 O-methyltransferase NIES4071_48520 PF01761 3-dehydroquinate synthase NIES4071_48540 PF00069 Protein kinase domain NIES4071_48580 PF02397 Bacterial sugar transferase NIES4071_48600 PF04286 Protein of unknown function (DUF445) NIES4071_48630 PF02954 Bacterial regulatory protein, Fis family NIES4071_48630 PF00072 Response regulator receiver domain NIES4071_48630 PF00158 Sigma-54 interaction domain NIES4071_48660 PF13361 UvrD-like helicase C-terminal domain NIES4071_48660 PF12705 PD-(D/E)XK nuclease superfamily NIES4071_48660 PF00580 UvrD/REP helicase N-terminal domain NIES4071_48670 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_48670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_48670 PF09308 LuxQ, periplasmic NIES4071_48670 PF00072 Response regulator receiver domain NIES4071_48700 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_48740 PF00403 Heavy-metal-associated domain NIES4071_48740 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_48740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_48750 PF09335 SNARE associated Golgi protein NIES4071_48760 PF00535 Glycosyl transferase family 2 NIES4071_48810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NIES4071_48820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_48820 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_48820 PF00072 Response regulator receiver domain NIES4071_48820 PF09308 LuxQ, periplasmic NIES4071_48840 PF01435 Peptidase family M48 NIES4071_48900 PF02824 TGS domain NIES4071_48900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES4071_48900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIES4071_48900 PF03129 Anticodon binding domain NIES4071_48940 PF01434 Peptidase family M41 NIES4071_48940 PF17862 AAA+ lid domain NIES4071_48940 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_48980 PF00171 Aldehyde dehydrogenase family NIES4071_49010 PF06463 Molybdenum Cofactor Synthesis C NIES4071_49010 PF04055 Radical SAM superfamily NIES4071_49050 PF00391 PEP-utilising enzyme, mobile domain NIES4071_49050 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES4071_49090 PF13193 AMP-binding enzyme C-terminal domain NIES4071_49090 PF00501 AMP-binding enzyme NIES4071_49100 PF01435 Peptidase family M48 NIES4071_49110 PF03079 ARD/ARD' family NIES4071_49130 PF00011 Hsp20/alpha crystallin family NIES4071_49140 PF04002 RadC-like JAB domain NIES4071_49160 PF00485 Phosphoribulokinase / Uridine kinase family NIES4071_49190 PF01596 O-methyltransferase NIES4071_49250 PF04101 Glycosyltransferase family 28 C-terminal domain NIES4071_49400 PF00561 alpha/beta hydrolase fold NIES4071_49430 PF00325 Bacterial regulatory proteins, crp family NIES4071_49430 PF00027 Cyclic nucleotide-binding domain NIES4071_49490 PF00805 Pentapeptide repeats (8 copies) NIES4071_49490 PF00400 WD domain, G-beta repeat NIES4071_49490 PF05729 NACHT domain NIES4071_49540 PF00072 Response regulator receiver domain NIES4071_49540 PF13426 PAS domain NIES4071_49540 PF08448 PAS fold NIES4071_49540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_49540 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_49600 PF00301 Rubredoxin NIES4071_49600 PF01613 Flavin reductase like domain NIES4071_49620 PF03776 Septum formation topological specificity factor MinE NIES4071_49630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIES4071_49640 PF03775 Septum formation inhibitor MinC, C-terminal domain NIES4071_49710 PF00011 Hsp20/alpha crystallin family NIES4071_49770 PF00462 Glutaredoxin NIES4071_49780 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_49790 PF06736 Protein of unknown function (DUF1211) NIES4071_49800 PF01494 FAD binding domain NIES4071_49820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_49820 PF03466 LysR substrate binding domain NIES4071_49830 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIES4071_49830 PF00271 Helicase conserved C-terminal domain NIES4071_49830 PF04851 Type III restriction enzyme, res subunit NIES4071_49830 PF08463 EcoEI R protein C-terminal NIES4071_49850 PF00487 Fatty acid desaturase NIES4071_49870 PF00270 DEAD/DEAH box helicase NIES4071_49870 PF00271 Helicase conserved C-terminal domain NIES4071_49870 PF09382 RQC domain NIES4071_49870 PF00570 HRDC domain NIES4071_49870 PF16124 RecQ zinc-binding NIES4071_49930 PF00400 WD domain, G-beta repeat NIES4071_49950 PF00069 Protein kinase domain NIES4071_49950 PF03793 PASTA domain NIES4071_49960 PF00069 Protein kinase domain NIES4071_49970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NIES4071_49970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NIES4071_50010 PF03055 Retinal pigment epithelial membrane protein NIES4071_50020 PF03092 BT1 family NIES4071_50060 PF00462 Glutaredoxin NIES4071_50070 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NIES4071_50100 PF01022 Bacterial regulatory protein, arsR family NIES4071_50120 PF01556 DnaJ C terminal domain NIES4071_50120 PF00226 DnaJ domain NIES4071_50120 PF00684 DnaJ central domain NIES4071_50140 PF00574 Clp protease NIES4071_50150 PF00092 von Willebrand factor type A domain NIES4071_50160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES4071_50190 PF07499 RuvA, C-terminal domain NIES4071_50190 PF01330 RuvA N terminal domain NIES4071_50200 PF05116 Sucrose-6F-phosphate phosphohydrolase NIES4071_50230 PF02609 Exonuclease VII small subunit NIES4071_50250 PF02601 Exonuclease VII, large subunit NIES4071_50250 PF13742 OB-fold nucleic acid binding domain NIES4071_50260 PF00154 recA bacterial DNA recombination protein NIES4071_50290 PF04241 Protein of unknown function (DUF423) NIES4071_50320 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus NIES4071_50330 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_50330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_50340 PF01979 Amidohydrolase family NIES4071_50350 PF00731 AIR carboxylase NIES4071_50360 PF00534 Glycosyl transferases group 1 NIES4071_50360 PF13439 Glycosyltransferase Family 4 NIES4071_50380 PF13579 Glycosyl transferase 4-like domain NIES4071_50380 PF00534 Glycosyl transferases group 1 NIES4071_50400 PF06480 FtsH Extracellular NIES4071_50400 PF01434 Peptidase family M41 NIES4071_50400 PF17862 AAA+ lid domain NIES4071_50400 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_50520 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_50520 PF00400 WD domain, G-beta repeat NIES4071_50540 PF13180 PDZ domain NIES4071_50540 PF00595 PDZ domain NIES4071_50620 PF00595 PDZ domain NIES4071_50680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NIES4071_50680 PF00326 Prolyl oligopeptidase family NIES4071_50690 PF00595 PDZ domain NIES4071_50710 PF13180 PDZ domain NIES4071_50760 PF00149 Calcineurin-like phosphoesterase NIES4071_50770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NIES4071_50780 PF00361 Proton-conducting membrane transporter NIES4071_50880 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_50880 PF00989 PAS fold NIES4071_50880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_50910 PF00072 Response regulator receiver domain NIES4071_50910 PF00196 Bacterial regulatory proteins, luxR family NIES4071_50920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_50920 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_50930 PF06628 Catalase-related immune-responsive NIES4071_50930 PF00199 Catalase NIES4071_50950 PF00072 Response regulator receiver domain NIES4071_50950 PF02954 Bacterial regulatory protein, Fis family NIES4071_50950 PF00158 Sigma-54 interaction domain NIES4071_50960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_50960 PF07730 Histidine kinase NIES4071_50960 PF00672 HAMP domain NIES4071_50970 PF00072 Response regulator receiver domain NIES4071_50970 PF00196 Bacterial regulatory proteins, luxR family NIES4071_51010 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NIES4071_51020 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NIES4071_51030 PF06965 Na+/H+ antiporter 1 NIES4071_51030 PF13462 Thioredoxin NIES4071_51040 PF00857 Isochorismatase family NIES4071_51050 PF01380 SIS domain NIES4071_51060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NIES4071_51070 PF00072 Response regulator receiver domain NIES4071_51070 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_51070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_51070 PF09308 LuxQ, periplasmic NIES4071_51090 PF01476 LysM domain NIES4071_51090 PF03734 L,D-transpeptidase catalytic domain NIES4071_51100 PF01243 Pyridoxamine 5'-phosphate oxidase NIES4071_51110 PF13180 PDZ domain NIES4071_51120 PF13180 PDZ domain NIES4071_51120 PF17820 PDZ domain NIES4071_51130 PF00072 Response regulator receiver domain NIES4071_51130 PF00196 Bacterial regulatory proteins, luxR family NIES4071_51190 PF06250 YhcG PDDEXK nuclease domain NIES4071_51190 PF17761 DUF1016 N-terminal domain NIES4071_51220 PF00456 Transketolase, thiamine diphosphate binding domain NIES4071_51220 PF02780 Transketolase, C-terminal domain NIES4071_51220 PF02779 Transketolase, pyrimidine binding domain NIES4071_51230 PF00455 DeoR C terminal sensor domain NIES4071_51230 PF08220 DeoR-like helix-turn-helix domain NIES4071_51270 PF08241 Methyltransferase domain NIES4071_51320 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_51330 PF00664 ABC transporter transmembrane region NIES4071_51330 PF00005 ABC transporter NIES4071_51400 PF01943 Polysaccharide biosynthesis protein NIES4071_51400 PF14667 Polysaccharide biosynthesis C-terminal domain NIES4071_51420 PF00535 Glycosyl transferase family 2 NIES4071_51430 PF00534 Glycosyl transferases group 1 NIES4071_51430 PF13439 Glycosyltransferase Family 4 NIES4071_51440 PF00535 Glycosyl transferase family 2 NIES4071_51450 PF00535 Glycosyl transferase family 2 NIES4071_51490 PF00535 Glycosyl transferase family 2 NIES4071_51500 PF00535 Glycosyl transferase family 2 NIES4071_51510 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_51510 PF00672 HAMP domain NIES4071_51510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_51510 PF18698 Histidine kinase sensor domain NIES4071_51560 PF00672 HAMP domain NIES4071_51560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_51560 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_51560 PF08448 PAS fold NIES4071_51560 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NIES4071_51570 PF00072 Response regulator receiver domain NIES4071_51570 PF00196 Bacterial regulatory proteins, luxR family NIES4071_51590 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES4071_51600 PF02397 Bacterial sugar transferase NIES4071_51620 PF08448 PAS fold NIES4071_51620 PF00672 HAMP domain NIES4071_51620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_51620 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NIES4071_51620 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_51630 PF08448 PAS fold NIES4071_51630 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NIES4071_51630 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_51630 PF00672 HAMP domain NIES4071_51630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_51640 PF00072 Response regulator receiver domain NIES4071_51640 PF00196 Bacterial regulatory proteins, luxR family NIES4071_51650 PF01740 STAS domain NIES4071_51660 PF00107 Zinc-binding dehydrogenase NIES4071_51660 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_51730 PF04657 Putative inner membrane exporter, YdcZ NIES4071_51850 PF02769 AIR synthase related protein, C-terminal domain NIES4071_51850 PF00586 AIR synthase related protein, N-terminal domain NIES4071_51880 PF01924 Hydrogenase formation hypA family NIES4071_51890 PF01455 HupF/HypC family NIES4071_51900 PF07503 HypF finger NIES4071_51900 PF00708 Acylphosphatase NIES4071_51900 PF01300 Telomere recombination NIES4071_51900 PF17788 HypF Kae1-like domain NIES4071_51970 PF18073 Rubredoxin metal binding domain NIES4071_52040 PF04452 RNA methyltransferase NIES4071_52100 PF00069 Protein kinase domain NIES4071_52100 PF14032 PknH-like extracellular domain NIES4071_52110 PF00069 Protein kinase domain NIES4071_52110 PF03793 PASTA domain NIES4071_52120 PF03793 PASTA domain NIES4071_52120 PF00069 Protein kinase domain NIES4071_52170 PF07690 Major Facilitator Superfamily NIES4071_52200 PF13614 AAA domain NIES4071_52330 PF13302 Acetyltransferase (GNAT) domain NIES4071_52360 PF07690 Major Facilitator Superfamily NIES4071_52570 PF00400 WD domain, G-beta repeat NIES4071_52660 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NIES4071_52660 PF10458 Valyl tRNA synthetase tRNA binding arm NIES4071_52660 PF00133 tRNA synthetases class I (I, L, M and V) NIES4071_52660 PF08264 Anticodon-binding domain of tRNA NIES4071_52680 PF04072 Leucine carboxyl methyltransferase NIES4071_52720 PF03109 ABC1 family NIES4071_52730 PF02463 RecF/RecN/SMC N terminal domain NIES4071_52770 PF07885 Ion channel NIES4071_52770 PF17655 Inward rectifier potassium channel C-terminal domain NIES4071_52790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_52790 PF00989 PAS fold NIES4071_52790 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_52800 PF03773 Predicted permease NIES4071_52850 PF00583 Acetyltransferase (GNAT) family NIES4071_52890 PF13460 NAD(P)H-binding NIES4071_52900 PF00756 Putative esterase NIES4071_52920 PF07685 CobB/CobQ-like glutamine amidotransferase domain NIES4071_52920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIES4071_52930 PF10128 Glucose-6-phosphate dehydrogenase subunit NIES4071_52930 PF01471 Putative peptidoglycan binding domain NIES4071_52940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NIES4071_52940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NIES4071_52950 PF00923 Transaldolase/Fructose-6-phosphate aldolase NIES4071_52970 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_52990 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_53040 PF17975 Ribonucleotide reductase alpha domain NIES4071_53120 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_53140 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_53140 PF00672 HAMP domain NIES4071_53140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_53150 PF00202 Aminotransferase class-III NIES4071_53170 PF00171 Aldehyde dehydrogenase family NIES4071_53240 PF00067 Cytochrome P450 NIES4071_53280 PF07690 Major Facilitator Superfamily NIES4071_53310 PF08494 DEAD/H associated NIES4071_53310 PF00270 DEAD/DEAH box helicase NIES4071_53310 PF00271 Helicase conserved C-terminal domain NIES4071_53330 PF01569 PAP2 superfamily NIES4071_53420 PF00664 ABC transporter transmembrane region NIES4071_53420 PF00005 ABC transporter NIES4071_53420 PF03412 Peptidase C39 family NIES4071_53450 PF09312 SurA N-terminal domain NIES4071_53450 PF00639 PPIC-type PPIASE domain NIES4071_53560 PF17287 POTRA domain NIES4071_53560 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NIES4071_53560 PF08479 POTRA domain, ShlB-type NIES4071_53570 PF01943 Polysaccharide biosynthesis protein NIES4071_53570 PF14667 Polysaccharide biosynthesis C-terminal domain NIES4071_53580 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_53590 PF01625 Peptide methionine sulfoxide reductase NIES4071_53600 PF08534 Redoxin NIES4071_53610 PF01475 Ferric uptake regulator family NIES4071_53630 PF00400 WD domain, G-beta repeat NIES4071_53670 PF01850 PIN domain NIES4071_53790 PF00535 Glycosyl transferase family 2 NIES4071_53830 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_53830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_53870 PF01139 tRNA-splicing ligase RtcB NIES4071_53890 PF01435 Peptidase family M48 NIES4071_53940 PF03061 Thioesterase superfamily NIES4071_53980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NIES4071_53980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NIES4071_53980 PF13288 DXP reductoisomerase C-terminal domain NIES4071_54000 PF02021 Uncharacterised protein family UPF0102 NIES4071_54020 PF02547 Queuosine biosynthesis protein NIES4071_54060 PF00668 Condensation domain NIES4071_54060 PF13193 AMP-binding enzyme C-terminal domain NIES4071_54060 PF00501 AMP-binding enzyme NIES4071_54060 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_54060 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_54060 PF08659 KR domain NIES4071_54060 PF00550 Phosphopantetheine attachment site NIES4071_54060 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_54060 PF14765 Polyketide synthase dehydratase NIES4071_54070 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NIES4071_54090 PF16864 Dimerisation domain NIES4071_54090 PF00891 O-methyltransferase domain NIES4071_54130 PF07486 Cell Wall Hydrolase NIES4071_54130 PF01471 Putative peptidoglycan binding domain NIES4071_54140 PF00905 Penicillin binding protein transpeptidase domain NIES4071_54160 PF02080 TrkA-C domain NIES4071_54160 PF02254 TrkA-N domain NIES4071_54170 PF02386 Cation transport protein NIES4071_54180 PF08241 Methyltransferase domain NIES4071_54190 PF01040 UbiA prenyltransferase family NIES4071_54220 PF05368 NmrA-like family NIES4071_54270 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_54290 PF13193 AMP-binding enzyme C-terminal domain NIES4071_54290 PF16177 Acetyl-coenzyme A synthetase N-terminus NIES4071_54290 PF00501 AMP-binding enzyme NIES4071_54340 PF05685 Putative restriction endonuclease NIES4071_54360 PF05685 Putative restriction endonuclease NIES4071_54390 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_54390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_54410 PF17275 Family of unknown function (DUF5340) NIES4071_54450 PF00486 Transcriptional regulatory protein, C terminal NIES4071_54450 PF00072 Response regulator receiver domain NIES4071_54460 PF01513 ATP-NAD kinase NIES4071_54480 PF08041 PetM family of cytochrome b6f complex subunit 7 NIES4071_54520 PF00149 Calcineurin-like phosphoesterase NIES4071_54530 PF13181 Tetratricopeptide repeat NIES4071_54530 PF01435 Peptidase family M48 NIES4071_54570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NIES4071_54570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIES4071_54580 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_54590 PF08486 Stage II sporulation protein NIES4071_54620 PF01740 STAS domain NIES4071_54630 PF00072 Response regulator receiver domain NIES4071_54630 PF00486 Transcriptional regulatory protein, C terminal NIES4071_54670 PF00999 Sodium/hydrogen exchanger family NIES4071_54690 PF02954 Bacterial regulatory protein, Fis family NIES4071_54690 PF00158 Sigma-54 interaction domain NIES4071_54690 PF00072 Response regulator receiver domain NIES4071_54760 PF00400 WD domain, G-beta repeat NIES4071_54760 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_54840 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIES4071_54840 PF00306 ATP synthase alpha/beta chain, C terminal domain NIES4071_54840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIES4071_54850 PF00213 ATP synthase delta (OSCP) subunit NIES4071_54860 PF00430 ATP synthase B/B' CF(0) NIES4071_54880 PF00137 ATP synthase subunit C NIES4071_54890 PF00119 ATP synthase A chain NIES4071_54900 PF12966 N-ATPase, AtpR subunit NIES4071_54910 PF13847 Methyltransferase domain NIES4071_54920 PF00145 C-5 cytosine-specific DNA methylase NIES4071_54920 PF12728 Helix-turn-helix domain NIES4071_54960 PF00427 Phycobilisome Linker polypeptide NIES4071_54960 PF00502 Phycobilisome protein NIES4071_54970 PF00502 Phycobilisome protein NIES4071_54980 PF00502 Phycobilisome protein NIES4071_54990 PF01383 CpcD/allophycocyanin linker domain NIES4071_55010 PF01098 Cell cycle protein NIES4071_55060 PF05140 ResB-like family NIES4071_55090 PF00657 GDSL-like Lipase/Acylhydrolase NIES4071_55120 PF01136 Peptidase family U32 NIES4071_55120 PF12392 Collagenase NIES4071_55140 PF00196 Bacterial regulatory proteins, luxR family NIES4071_55140 PF00072 Response regulator receiver domain NIES4071_55150 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_55150 PF13755 Sensor N-terminal transmembrane domain NIES4071_55150 PF13756 Stimulus-sensing domain NIES4071_55150 PF00672 HAMP domain NIES4071_55150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_55170 PF03814 Potassium-transporting ATPase A subunit NIES4071_55200 PF02669 K+-transporting ATPase, c chain NIES4071_55210 PF02702 Osmosensitive K+ channel His kinase sensor domain NIES4071_55310 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NIES4071_55310 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NIES4071_55330 PF10509 Galactokinase galactose-binding signature NIES4071_55330 PF08544 GHMP kinases C terminal NIES4071_55330 PF00288 GHMP kinases N terminal domain NIES4071_55410 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NIES4071_55450 PF03275 UDP-galactopyranose mutase NIES4071_55460 PF00106 short chain dehydrogenase NIES4071_55490 PF01425 Amidase NIES4071_55500 PF01425 Amidase NIES4071_55520 PF08032 RNA 2'-O ribose methyltransferase substrate binding NIES4071_55520 PF00588 SpoU rRNA Methylase family NIES4071_55530 PF00636 Ribonuclease III domain NIES4071_55540 PF01740 STAS domain NIES4071_55550 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NIES4071_55550 PF00117 Glutamine amidotransferase class-I NIES4071_55610 PF00148 Nitrogenase component 1 type Oxidoreductase NIES4071_55630 PF02702 Osmosensitive K+ channel His kinase sensor domain NIES4071_55640 PF00072 Response regulator receiver domain NIES4071_55640 PF00196 Bacterial regulatory proteins, luxR family NIES4071_55660 PF00072 Response regulator receiver domain NIES4071_55660 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_55680 PF00155 Aminotransferase class I and II NIES4071_55690 PF00085 Thioredoxin NIES4071_55780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES4071_55810 PF00873 AcrB/AcrD/AcrF family NIES4071_55830 PF00873 AcrB/AcrD/AcrF family NIES4071_55840 PF13533 Biotin-lipoyl like NIES4071_55880 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_55880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_55920 PF02574 Homocysteine S-methyltransferase NIES4071_55920 PF02310 B12 binding domain NIES4071_55920 PF00809 Pterin binding enzyme NIES4071_55920 PF02607 B12 binding domain NIES4071_55920 PF02965 Vitamin B12 dependent methionine synthase, activation domain NIES4071_56000 PF03412 Peptidase C39 family NIES4071_56000 PF00005 ABC transporter NIES4071_56000 PF00664 ABC transporter transmembrane region NIES4071_56020 PF01940 Integral membrane protein DUF92 NIES4071_56060 PF00082 Subtilase family NIES4071_56060 PF05922 Peptidase inhibitor I9 NIES4071_56120 PF13439 Glycosyltransferase Family 4 NIES4071_56140 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_56140 PF00107 Zinc-binding dehydrogenase NIES4071_56180 PF04012 PspA/IM30 family NIES4071_56190 PF04012 PspA/IM30 family NIES4071_56230 PF00378 Enoyl-CoA hydratase/isomerase NIES4071_56280 PF02152 Dihydroneopterin aldolase NIES4071_56290 PF05231 MASE1 NIES4071_56290 PF08447 PAS fold NIES4071_56290 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_56290 PF13426 PAS domain NIES4071_56290 PF08448 PAS fold NIES4071_56290 PF00563 EAL domain NIES4071_56380 PF13282 Domain of unknown function (DUF4070) NIES4071_56380 PF04055 Radical SAM superfamily NIES4071_56380 PF02310 B12 binding domain NIES4071_56390 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_56440 PF00012 Hsp70 protein NIES4071_56480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIES4071_56480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NIES4071_56500 PF17806 Sarcosine oxidase A3 domain NIES4071_56500 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_56500 PF01571 Aminomethyltransferase folate-binding domain NIES4071_56500 PF08669 Glycine cleavage T-protein C-terminal barrel domain NIES4071_56530 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_56530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_56530 PF13426 PAS domain NIES4071_56530 PF00672 HAMP domain NIES4071_56540 PF00072 Response regulator receiver domain NIES4071_56550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_56550 PF08446 PAS fold NIES4071_56550 PF01590 GAF domain NIES4071_56550 PF00360 Phytochrome region NIES4071_56550 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_56560 PF12773 Double zinc ribbon NIES4071_56560 PF00498 FHA domain NIES4071_56570 PF00072 Response regulator receiver domain NIES4071_56570 PF14332 Domain of unknown function (DUF4388) NIES4071_56580 PF00072 Response regulator receiver domain NIES4071_56580 PF00486 Transcriptional regulatory protein, C terminal NIES4071_56620 PF00072 Response regulator receiver domain NIES4071_56620 PF00672 HAMP domain NIES4071_56620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_56620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_56620 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_56620 PF01627 Hpt domain NIES4071_56630 PF01627 Hpt domain NIES4071_56630 PF00486 Transcriptional regulatory protein, C terminal NIES4071_56630 PF00072 Response regulator receiver domain NIES4071_56680 PF00834 Ribulose-phosphate 3 epimerase family NIES4071_56690 PF00082 Subtilase family NIES4071_56720 PF00596 Class II Aldolase and Adducin N-terminal domain NIES4071_56750 PF01555 DNA methylase NIES4071_56790 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_56800 PF05496 Holliday junction DNA helicase RuvB P-loop domain NIES4071_56800 PF05491 RuvB C-terminal winged helix domain NIES4071_56800 PF17864 RuvB AAA lid domain NIES4071_56850 PF00067 Cytochrome P450 NIES4071_56860 PF01523 Putative modulator of DNA gyrase NIES4071_56900 PF00072 Response regulator receiver domain NIES4071_56900 PF00486 Transcriptional regulatory protein, C terminal NIES4071_56910 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_56910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_56920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_56920 PF00205 Thiamine pyrophosphate enzyme, central domain NIES4071_56920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES4071_56930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NIES4071_56930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NIES4071_57000 PF01040 UbiA prenyltransferase family NIES4071_57010 PF13579 Glycosyl transferase 4-like domain NIES4071_57010 PF00534 Glycosyl transferases group 1 NIES4071_57020 PF01817 Chorismate mutase type II NIES4071_57020 PF02153 Prephenate dehydrogenase NIES4071_57030 PF01761 3-dehydroquinate synthase NIES4071_57060 PF04715 Anthranilate synthase component I, N terminal region NIES4071_57060 PF00425 chorismate binding enzyme NIES4071_57060 PF00117 Glutamine amidotransferase class-I NIES4071_57070 PF00218 Indole-3-glycerol phosphate synthase NIES4071_57090 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_57100 PF00591 Glycosyl transferase family, a/b domain NIES4071_57100 PF02885 Glycosyl transferase family, helical bundle domain NIES4071_57110 PF00793 DAHP synthetase I family NIES4071_57110 PF18152 DAHP synthase ferredoxin-like domain NIES4071_57160 PF12848 ABC transporter NIES4071_57160 PF16326 ABC transporter C-terminal domain NIES4071_57160 PF00005 ABC transporter NIES4071_57170 PF01965 DJ-1/PfpI family NIES4071_57180 PF12833 Helix-turn-helix domain NIES4071_57180 PF02311 AraC-like ligand binding domain NIES4071_57210 PF04055 Radical SAM superfamily NIES4071_57210 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NIES4071_57210 PF13186 Iron-sulfur cluster-binding domain NIES4071_57230 PF16859 Tetracyclin repressor-like, C-terminal domain NIES4071_57230 PF00440 Bacterial regulatory proteins, tetR family NIES4071_57240 PF06965 Na+/H+ antiporter 1 NIES4071_57240 PF13462 Thioredoxin NIES4071_57250 PF00392 Bacterial regulatory proteins, gntR family NIES4071_57250 PF00155 Aminotransferase class I and II NIES4071_57310 PF00072 Response regulator receiver domain NIES4071_57310 PF00196 Bacterial regulatory proteins, luxR family NIES4071_57330 PF00067 Cytochrome P450 NIES4071_57340 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NIES4071_57370 PF01494 FAD binding domain NIES4071_57390 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_57450 PF00005 ABC transporter NIES4071_57450 PF02687 FtsX-like permease family NIES4071_57450 PF12704 MacB-like periplasmic core domain NIES4071_57460 PF00657 GDSL-like Lipase/Acylhydrolase NIES4071_57470 PF00931 NB-ARC domain NIES4071_57470 PF00400 WD domain, G-beta repeat NIES4071_57480 PF00067 Cytochrome P450 NIES4071_57610 PF01593 Flavin containing amine oxidoreductase NIES4071_57620 PF00293 NUDIX domain NIES4071_57660 PF01156 Inosine-uridine preferring nucleoside hydrolase NIES4071_57670 PF00294 pfkB family carbohydrate kinase NIES4071_57690 PF09827 CRISPR associated protein Cas2 NIES4071_57710 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_57720 PF08241 Methyltransferase domain NIES4071_57730 PF01139 tRNA-splicing ligase RtcB NIES4071_57730 PF01139 tRNA-splicing ligase RtcB NIES4071_57760 PF01661 Macro domain NIES4071_57780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_57780 PF03466 LysR substrate binding domain NIES4071_57800 PF03976 Polyphosphate kinase 2 (PPK2) NIES4071_57830 PF13649 Methyltransferase domain NIES4071_57840 PF01209 ubiE/COQ5 methyltransferase family NIES4071_57850 PF01209 ubiE/COQ5 methyltransferase family NIES4071_57910 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NIES4071_57910 PF01676 Metalloenzyme superfamily NIES4071_57920 PF12848 ABC transporter NIES4071_57920 PF00005 ABC transporter NIES4071_57920 PF16326 ABC transporter C-terminal domain NIES4071_57960 PF05419 GUN4-like NIES4071_57960 PF16416 ARM-like repeat domain, GUN4-N terminal NIES4071_57990 PF07690 Major Facilitator Superfamily NIES4071_58010 PF04556 DpnII restriction endonuclease NIES4071_58020 PF02086 D12 class N6 adenine-specific DNA methyltransferase NIES4071_58140 PF00472 RF-1 domain NIES4071_58140 PF03462 PCRF domain NIES4071_58170 PF00572 Ribosomal protein L13 NIES4071_58180 PF01416 tRNA pseudouridine synthase NIES4071_58250 PF00344 SecY translocase NIES4071_58260 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NIES4071_58300 PF00410 Ribosomal protein S8 NIES4071_58310 PF00281 Ribosomal protein L5 NIES4071_58310 PF00673 ribosomal L5P family C-terminus NIES4071_58370 PF00189 Ribosomal protein S3, C-terminal domain NIES4071_58370 PF07650 KH domain NIES4071_58390 PF00203 Ribosomal protein S19 NIES4071_58400 PF03947 Ribosomal Proteins L2, C-terminal domain NIES4071_58400 PF00181 Ribosomal Proteins L2, RNA binding domain NIES4071_58410 PF00276 Ribosomal protein L23 NIES4071_58420 PF00573 Ribosomal protein L4/L1 family NIES4071_58440 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N NIES4071_58480 PF00999 Sodium/hydrogen exchanger family NIES4071_58490 PF00999 Sodium/hydrogen exchanger family NIES4071_58500 PF00069 Protein kinase domain NIES4071_58590 PF01204 Trehalase NIES4071_58620 PF01396 Topoisomerase DNA binding C4 zinc finger NIES4071_58620 PF01751 Toprim domain NIES4071_58620 PF01131 DNA topoisomerase NIES4071_58630 PF01790 Prolipoprotein diacylglyceryl transferase NIES4071_58640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_58690 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_58690 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_58690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_58700 PF04055 Radical SAM superfamily NIES4071_58710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NIES4071_58710 PF02770 Acyl-CoA dehydrogenase, middle domain NIES4071_58710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NIES4071_58740 PF00188 Cysteine-rich secretory protein family NIES4071_58760 PF03412 Peptidase C39 family NIES4071_58760 PF00664 ABC transporter transmembrane region NIES4071_58760 PF00005 ABC transporter NIES4071_58970 PF00342 Phosphoglucose isomerase NIES4071_59010 PF02653 Branched-chain amino acid transport system / permease component NIES4071_59020 PF02653 Branched-chain amino acid transport system / permease component NIES4071_59020 PF11862 Domain of unknown function (DUF3382) NIES4071_59030 PF00005 ABC transporter NIES4071_59030 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES4071_59040 PF00005 ABC transporter NIES4071_59100 PF00106 short chain dehydrogenase NIES4071_59190 PF00011 Hsp20/alpha crystallin family NIES4071_59260 PF01047 MarR family NIES4071_59270 PF13533 Biotin-lipoyl like NIES4071_59280 PF07690 Major Facilitator Superfamily NIES4071_59290 PF07690 Major Facilitator Superfamily NIES4071_59310 PF00881 Nitroreductase family NIES4071_59340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIES4071_59340 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NIES4071_59350 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_59360 PF00510 Cytochrome c oxidase subunit III NIES4071_59380 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_59410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NIES4071_59430 PF00248 Aldo/keto reductase family NIES4071_59460 PF00107 Zinc-binding dehydrogenase NIES4071_59460 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_59470 PF12833 Helix-turn-helix domain NIES4071_59470 PF06719 AraC-type transcriptional regulator N-terminus NIES4071_59490 PF00999 Sodium/hydrogen exchanger family NIES4071_59510 PF07519 Tannase and feruloyl esterase NIES4071_59550 PF00356 Bacterial regulatory proteins, lacI family NIES4071_59560 PF00248 Aldo/keto reductase family NIES4071_59580 PF00654 Voltage gated chloride channel NIES4071_59600 PF03552 Cellulose synthase NIES4071_59600 PF00535 Glycosyl transferase family 2 NIES4071_59600 PF07238 PilZ domain NIES4071_59600 PF03170 Bacterial cellulose synthase subunit NIES4071_59640 PF06055 Exopolysaccharide synthesis, ExoD NIES4071_59650 PF01522 Polysaccharide deacetylase NIES4071_59680 PF00069 Protein kinase domain NIES4071_59700 PF01553 Acyltransferase NIES4071_59700 PF13193 AMP-binding enzyme C-terminal domain NIES4071_59700 PF00501 AMP-binding enzyme NIES4071_59710 PF01594 AI-2E family transporter NIES4071_59750 PF00069 Protein kinase domain NIES4071_59750 PF00400 WD domain, G-beta repeat NIES4071_59760 PF00226 DnaJ domain NIES4071_59760 PF00684 DnaJ central domain NIES4071_59760 PF01556 DnaJ C terminal domain NIES4071_59780 PF01494 FAD binding domain NIES4071_59790 PF13188 PAS domain NIES4071_59790 PF08448 PAS fold NIES4071_59790 PF00072 Response regulator receiver domain NIES4071_59790 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_59790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_59800 PF01145 SPFH domain / Band 7 family NIES4071_59810 PF01464 Transglycosylase SLT domain NIES4071_59820 PF00069 Protein kinase domain NIES4071_59820 PF03793 PASTA domain NIES4071_59840 PF00400 WD domain, G-beta repeat NIES4071_59840 PF00805 Pentapeptide repeats (8 copies) NIES4071_59840 PF05729 NACHT domain NIES4071_59870 PF00805 Pentapeptide repeats (8 copies) NIES4071_59870 PF00069 Protein kinase domain NIES4071_59900 PF00581 Rhodanese-like domain NIES4071_59910 PF01266 FAD dependent oxidoreductase NIES4071_59910 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NIES4071_59920 PF00072 Response regulator receiver domain NIES4071_59930 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_59930 PF12804 MobA-like NTP transferase domain NIES4071_59940 PF01112 Asparaginase NIES4071_59970 PF01180 Dihydroorotate dehydrogenase NIES4071_60040 PF01348 Type II intron maturase NIES4071_60040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_60060 PF05731 TROVE domain NIES4071_60070 PF01850 PIN domain NIES4071_60120 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_60120 PF17866 AAA lid domain NIES4071_60130 PF00400 WD domain, G-beta repeat NIES4071_60130 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_60140 PF00145 C-5 cytosine-specific DNA methylase NIES4071_60180 PF00166 Chaperonin 10 Kd subunit NIES4071_60190 PF00072 Response regulator receiver domain NIES4071_60190 PF00486 Transcriptional regulatory protein, C terminal NIES4071_60210 PF12697 Alpha/beta hydrolase family NIES4071_60220 PF00072 Response regulator receiver domain NIES4071_60220 PF08448 PAS fold NIES4071_60220 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_60220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_60220 PF13188 PAS domain NIES4071_60300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIES4071_60300 PF02806 Alpha amylase, C-terminal all-beta domain NIES4071_60300 PF00128 Alpha amylase, catalytic domain NIES4071_60340 PF00905 Penicillin binding protein transpeptidase domain NIES4071_60340 PF03717 Penicillin-binding Protein dimerisation domain NIES4071_60340 PF03793 PASTA domain NIES4071_60350 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus NIES4071_60350 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term NIES4071_60380 PF00226 DnaJ domain NIES4071_60380 PF01556 DnaJ C terminal domain NIES4071_60380 PF00684 DnaJ central domain NIES4071_60400 PF00571 CBS domain NIES4071_60400 PF01769 Divalent cation transporter NIES4071_60400 PF03448 MgtE intracellular N domain NIES4071_60480 PF01634 ATP phosphoribosyltransferase NIES4071_60490 PF00486 Transcriptional regulatory protein, C terminal NIES4071_60490 PF00072 Response regulator receiver domain NIES4071_60520 PF00535 Glycosyl transferase family 2 NIES4071_60550 PF00155 Aminotransferase class I and II NIES4071_60560 PF00465 Iron-containing alcohol dehydrogenase NIES4071_60570 PF10726 Protein of function (DUF2518) NIES4071_60610 PF01593 Flavin containing amine oxidoreductase NIES4071_60650 PF01062 Bestrophin, RFP-TM, chloride channel NIES4071_60710 PF05685 Putative restriction endonuclease NIES4071_60720 PF04389 Peptidase family M28 NIES4071_60730 PF00012 Hsp70 protein NIES4071_60740 PF01556 DnaJ C terminal domain NIES4071_60740 PF00226 DnaJ domain NIES4071_60750 PF01556 DnaJ C terminal domain NIES4071_60750 PF00226 DnaJ domain NIES4071_60750 PF00684 DnaJ central domain NIES4071_60770 PF01255 Putative undecaprenyl diphosphate synthase NIES4071_60780 PF02457 DisA bacterial checkpoint controller nucleotide-binding NIES4071_60800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NIES4071_60800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIES4071_60820 PF17871 AAA lid domain NIES4071_60820 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_60820 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_60820 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_60820 PF07724 AAA domain (Cdc48 subfamily) NIES4071_60860 PF10502 Signal peptidase, peptidase S26 NIES4071_60900 PF00905 Penicillin binding protein transpeptidase domain NIES4071_60900 PF00912 Transglycosylase NIES4071_60910 PF00579 tRNA synthetases class I (W and Y) NIES4071_61020 PF00902 Sec-independent protein translocase protein (TatC) NIES4071_61060 PF00072 Response regulator receiver domain NIES4071_61060 PF01627 Hpt domain NIES4071_61060 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_61060 PF00672 HAMP domain NIES4071_61060 PF17149 Periplasmic sensor domain found in signal transduction proteins NIES4071_61060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_61070 PF18032 Photoprotection regulator fluorescence recovery protein NIES4071_61090 PF00124 Photosynthetic reaction centre protein NIES4071_61160 PF00400 WD domain, G-beta repeat NIES4071_61160 PF00400 WD domain, G-beta repeat NIES4071_61200 PF00106 short chain dehydrogenase NIES4071_61210 PF00487 Fatty acid desaturase NIES4071_61290 PF00171 Aldehyde dehydrogenase family NIES4071_61300 PF13673 Acetyltransferase (GNAT) domain NIES4071_61320 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_61320 PF13426 PAS domain NIES4071_61320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_61320 PF13188 PAS domain NIES4071_61320 PF00989 PAS fold NIES4071_61330 PF01497 Periplasmic binding protein NIES4071_61350 PF16485 Protealysin propeptide NIES4071_61350 PF02868 Thermolysin metallopeptidase, alpha-helical domain NIES4071_61350 PF01447 Thermolysin metallopeptidase, catalytic domain NIES4071_61360 PF05231 MASE1 NIES4071_61360 PF00563 EAL domain NIES4071_61380 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_61400 PF00459 Inositol monophosphatase family NIES4071_61410 PF00226 DnaJ domain NIES4071_61410 PF00684 DnaJ central domain NIES4071_61410 PF01556 DnaJ C terminal domain NIES4071_61420 PF13393 Histidyl-tRNA synthetase NIES4071_61430 PF00037 4Fe-4S binding domain NIES4071_61460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_61460 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_61460 PF08448 PAS fold NIES4071_61460 PF13188 PAS domain NIES4071_61460 PF00072 Response regulator receiver domain NIES4071_61480 PF00668 Condensation domain NIES4071_61480 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61480 PF00501 AMP-binding enzyme NIES4071_61480 PF00550 Phosphopantetheine attachment site NIES4071_61500 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_61500 PF00400 WD domain, G-beta repeat NIES4071_61540 PF00145 C-5 cytosine-specific DNA methylase NIES4071_61550 PF07690 Major Facilitator Superfamily NIES4071_61560 PF00501 AMP-binding enzyme NIES4071_61560 PF00668 Condensation domain NIES4071_61560 PF00550 Phosphopantetheine attachment site NIES4071_61560 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61570 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61570 PF00668 Condensation domain NIES4071_61570 PF00550 Phosphopantetheine attachment site NIES4071_61570 PF00501 AMP-binding enzyme NIES4071_61570 PF07993 Male sterility protein NIES4071_61610 PF02463 RecF/RecN/SMC N terminal domain NIES4071_61630 PF00550 Phosphopantetheine attachment site NIES4071_61630 PF00501 AMP-binding enzyme NIES4071_61630 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61630 PF00668 Condensation domain NIES4071_61640 PF00501 AMP-binding enzyme NIES4071_61640 PF00668 Condensation domain NIES4071_61640 PF00550 Phosphopantetheine attachment site NIES4071_61640 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61660 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_61700 PF00501 AMP-binding enzyme NIES4071_61700 PF00550 Phosphopantetheine attachment site NIES4071_61700 PF00391 PEP-utilising enzyme, mobile domain NIES4071_61700 PF08241 Methyltransferase domain NIES4071_61700 PF00668 Condensation domain NIES4071_61700 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61700 PF00975 Thioesterase domain NIES4071_61710 PF00668 Condensation domain NIES4071_61710 PF00550 Phosphopantetheine attachment site NIES4071_61710 PF13193 AMP-binding enzyme C-terminal domain NIES4071_61710 PF00501 AMP-binding enzyme NIES4071_61880 PF00067 Cytochrome P450 NIES4071_61890 PF01243 Pyridoxamine 5'-phosphate oxidase NIES4071_61890 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NIES4071_61900 PF01594 AI-2E family transporter NIES4071_61920 PF00483 Nucleotidyl transferase NIES4071_61940 PF00486 Transcriptional regulatory protein, C terminal NIES4071_61940 PF00072 Response regulator receiver domain NIES4071_61950 PF00072 Response regulator receiver domain NIES4071_61950 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_61950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_61950 PF09308 LuxQ, periplasmic NIES4071_61960 PF01546 Peptidase family M20/M25/M40 NIES4071_61960 PF07687 Peptidase dimerisation domain NIES4071_61980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIES4071_61980 PF17944 Arginine decarboxylase C-terminal helical extension NIES4071_61980 PF17810 Arginine decarboxylase helical bundle domain NIES4071_61990 PF00334 Nucleoside diphosphate kinase NIES4071_62000 PF03741 Integral membrane protein TerC family NIES4071_62040 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_62060 PF06988 NifT/FixU protein NIES4071_62070 PF04319 NifZ domain NIES4071_62080 PF00682 HMGL-like NIES4071_62120 PF05368 NmrA-like family NIES4071_62190 PF13407 Periplasmic binding protein domain NIES4071_62200 PF00005 ABC transporter NIES4071_62210 PF02653 Branched-chain amino acid transport system / permease component NIES4071_62220 PF02653 Branched-chain amino acid transport system / permease component NIES4071_62280 PF00072 Response regulator receiver domain NIES4071_62280 PF09308 LuxQ, periplasmic NIES4071_62280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_62280 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_62300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NIES4071_62300 PF01872 RibD C-terminal domain NIES4071_62340 PF00436 Single-strand binding protein family NIES4071_62360 PF00999 Sodium/hydrogen exchanger family NIES4071_62370 PF04122 Putative cell wall binding repeat 2 NIES4071_62370 PF01520 N-acetylmuramoyl-L-alanine amidase NIES4071_62380 PF01520 N-acetylmuramoyl-L-alanine amidase NIES4071_62380 PF11741 AMIN domain NIES4071_62410 PF00348 Polyprenyl synthetase NIES4071_62460 PF04025 Domain of unknown function (DUF370) NIES4071_62470 PF00625 Guanylate kinase NIES4071_62480 PF02605 Photosystem I reaction centre subunit XI NIES4071_62500 PF02507 Photosystem I reaction centre subunit III NIES4071_62510 PF00814 Glycoprotease family NIES4071_62520 PF12697 Alpha/beta hydrolase family NIES4071_62540 PF00583 Acetyltransferase (GNAT) family NIES4071_62580 PF05175 Methyltransferase small domain NIES4071_62590 PF01300 Telomere recombination NIES4071_62600 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_62600 PF00672 HAMP domain NIES4071_62600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_62600 PF18698 Histidine kinase sensor domain NIES4071_62600 PF00989 PAS fold NIES4071_62610 PF00583 Acetyltransferase (GNAT) family NIES4071_62630 PF02355 Protein export membrane protein NIES4071_62630 PF07549 SecD/SecF GG Motif NIES4071_62640 PF07549 SecD/SecF GG Motif NIES4071_62640 PF02355 Protein export membrane protein NIES4071_62650 PF02780 Transketolase, C-terminal domain NIES4071_62650 PF02779 Transketolase, pyrimidine binding domain NIES4071_62650 PF00364 Biotin-requiring enzyme NIES4071_62690 PF02069 Prokaryotic metallothionein NIES4071_62730 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES4071_62730 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES4071_62780 PF00360 Phytochrome region NIES4071_62780 PF01590 GAF domain NIES4071_62780 PF00563 EAL domain NIES4071_62780 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_62790 PF00360 Phytochrome region NIES4071_62790 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_62790 PF00563 EAL domain NIES4071_62790 PF01590 GAF domain NIES4071_62930 PF01699 Sodium/calcium exchanger protein NIES4071_62940 PF02463 RecF/RecN/SMC N terminal domain NIES4071_62970 PF18267 Rubredoxin NAD+ reductase C-terminal domain NIES4071_62970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_62970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES4071_62970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES4071_62970 PF04324 BFD-like [2Fe-2S] binding domain NIES4071_62980 PF13806 Rieske-like [2Fe-2S] domain NIES4071_63020 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NIES4071_63060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_63060 PF01590 GAF domain NIES4071_63070 PF08241 Methyltransferase domain NIES4071_63090 PF00120 Glutamine synthetase, catalytic domain NIES4071_63090 PF03951 Glutamine synthetase, beta-Grasp domain NIES4071_63100 PF00502 Phycobilisome protein NIES4071_63120 PF01728 FtsJ-like methyltransferase NIES4071_63120 PF01479 S4 domain NIES4071_63140 PF01926 50S ribosome-binding GTPase NIES4071_63140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIES4071_63200 PF01966 HD domain NIES4071_63200 PF13286 Phosphohydrolase-associated domain NIES4071_63210 PF01966 HD domain NIES4071_63210 PF13286 Phosphohydrolase-associated domain NIES4071_63230 PF00005 ABC transporter NIES4071_63250 PF13190 PDGLE domain NIES4071_63250 PF01891 Cobalt uptake substrate-specific transmembrane region NIES4071_63260 PF07732 Multicopper oxidase NIES4071_63260 PF07731 Multicopper oxidase NIES4071_63260 PF00394 Multicopper oxidase NIES4071_63290 PF03239 Iron permease FTR1 family NIES4071_63310 PF07885 Ion channel NIES4071_63310 PF17655 Inward rectifier potassium channel C-terminal domain NIES4071_63410 PF03330 Lytic transglycolase NIES4071_63460 PF00994 Probable molybdopterin binding domain NIES4071_63460 PF18146 Damage-inducible protein CinA KH domain NIES4071_63460 PF02464 Competence-damaged protein NIES4071_63470 PF00953 Glycosyl transferase family 4 NIES4071_63480 PF00464 Serine hydroxymethyltransferase NIES4071_63500 PF13579 Glycosyl transferase 4-like domain NIES4071_63500 PF00534 Glycosyl transferases group 1 NIES4071_63510 PF02397 Bacterial sugar transferase NIES4071_63520 PF04055 Radical SAM superfamily NIES4071_63530 PF11780 Protein of unknown function (DUF3318) NIES4071_63540 PF01541 GIY-YIG catalytic domain NIES4071_63540 PF02151 UvrB/uvrC motif NIES4071_63540 PF12826 Helix-hairpin-helix motif NIES4071_63540 PF08459 UvrC Helix-hairpin-helix N-terminal NIES4071_63580 PF00056 lactate/malate dehydrogenase, NAD binding domain NIES4071_63580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NIES4071_63590 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_63610 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_63620 PF01636 Phosphotransferase enzyme family NIES4071_63640 PF10531 SLBB domain NIES4071_63650 PF01040 UbiA prenyltransferase family NIES4071_63670 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIES4071_63670 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NIES4071_63680 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES4071_63690 PF00510 Cytochrome c oxidase subunit III NIES4071_63730 PF00583 Acetyltransferase (GNAT) family NIES4071_63760 PF00657 GDSL-like Lipase/Acylhydrolase NIES4071_63810 PF00271 Helicase conserved C-terminal domain NIES4071_63810 PF00270 DEAD/DEAH box helicase NIES4071_63910 PF05067 Manganese containing catalase NIES4071_63920 PF02638 Glycosyl hydrolase-like 10 NIES4071_63950 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family NIES4071_64090 PF02575 YbaB/EbfC DNA-binding family NIES4071_64100 PF01451 Low molecular weight phosphotyrosine protein phosphatase NIES4071_64110 PF00072 Response regulator receiver domain NIES4071_64110 PF00486 Transcriptional regulatory protein, C terminal NIES4071_64120 PF01565 FAD binding domain NIES4071_64120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NIES4071_64130 PF08245 Mur ligase middle domain NIES4071_64130 PF01225 Mur ligase family, catalytic domain NIES4071_64130 PF02875 Mur ligase family, glutamate ligase domain NIES4071_64150 PF02769 AIR synthase related protein, C-terminal domain NIES4071_64150 PF00586 AIR synthase related protein, N-terminal domain NIES4071_64170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NIES4071_64180 PF01797 Transposase IS200 like NIES4071_64200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_64200 PF01348 Type II intron maturase NIES4071_64210 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_64210 PF01348 Type II intron maturase NIES4071_64240 PF12728 Helix-turn-helix domain NIES4071_64240 PF02661 Fic/DOC family NIES4071_64250 PF01593 Flavin containing amine oxidoreductase NIES4071_64260 PF01593 Flavin containing amine oxidoreductase NIES4071_64270 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NIES4071_64290 PF13361 UvrD-like helicase C-terminal domain NIES4071_64290 PF00580 UvrD/REP helicase N-terminal domain NIES4071_64290 PF12462 DNA helicase IV / RNA helicase N terminal NIES4071_64300 PF01593 Flavin containing amine oxidoreductase NIES4071_64370 PF00067 Cytochrome P450 NIES4071_64380 PF00067 Cytochrome P450 NIES4071_64460 PF00152 tRNA synthetases class II (D, K and N) NIES4071_64460 PF01336 OB-fold nucleic acid binding domain NIES4071_64500 PF13847 Methyltransferase domain NIES4071_64500 PF01938 TRAM domain NIES4071_64510 PF00502 Phycobilisome protein NIES4071_64550 PF13537 Glutamine amidotransferase domain NIES4071_64550 PF00156 Phosphoribosyl transferase domain NIES4071_64560 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES4071_64580 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_64620 PF00905 Penicillin binding protein transpeptidase domain NIES4071_64620 PF00912 Transglycosylase NIES4071_64640 PF01252 Signal peptidase (SPase) II NIES4071_64650 PF02632 BioY family NIES4071_64660 PF12849 PBP superfamily domain NIES4071_64670 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_64680 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_64730 PF00005 ABC transporter NIES4071_64730 PF02687 FtsX-like permease family NIES4071_64730 PF12704 MacB-like periplasmic core domain NIES4071_64740 PF00005 ABC transporter NIES4071_64870 PF12833 Helix-turn-helix domain NIES4071_64880 PF00107 Zinc-binding dehydrogenase NIES4071_64880 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_64890 PF00107 Zinc-binding dehydrogenase NIES4071_64890 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_64920 PF00550 Phosphopantetheine attachment site NIES4071_64920 PF00107 Zinc-binding dehydrogenase NIES4071_64920 PF16197 Ketoacyl-synthetase C-terminal extension NIES4071_64920 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_64920 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_64920 PF08659 KR domain NIES4071_64920 PF14765 Polyketide synthase dehydratase NIES4071_64920 PF00698 Acyl transferase domain NIES4071_64920 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_65090 PF03793 PASTA domain NIES4071_65090 PF00069 Protein kinase domain NIES4071_65110 PF07238 PilZ domain NIES4071_65110 PF00069 Protein kinase domain NIES4071_65130 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NIES4071_65130 PF01189 16S rRNA methyltransferase RsmB/F NIES4071_65130 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NIES4071_65190 PF01343 Peptidase family S49 NIES4071_65200 PF01070 FMN-dependent dehydrogenase NIES4071_65210 PF01523 Putative modulator of DNA gyrase NIES4071_65250 PF00571 CBS domain NIES4071_65250 PF02163 Peptidase family M50 NIES4071_65270 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_65270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_65300 PF00589 Phage integrase family NIES4071_65300 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_65420 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_65420 PF09308 LuxQ, periplasmic NIES4071_65420 PF00072 Response regulator receiver domain NIES4071_65420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_65500 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_65500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_65500 PF13426 PAS domain NIES4071_65500 PF13188 PAS domain NIES4071_65500 PF00989 PAS fold NIES4071_65590 PF01494 FAD binding domain NIES4071_65640 PF00873 AcrB/AcrD/AcrF family NIES4071_65670 PF00873 AcrB/AcrD/AcrF family NIES4071_65680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_65680 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_65700 PF13411 MerR HTH family regulatory protein NIES4071_65720 PF00403 Heavy-metal-associated domain NIES4071_65740 PF00486 Transcriptional regulatory protein, C terminal NIES4071_65740 PF00072 Response regulator receiver domain NIES4071_65750 PF16736 Single Cache-like NIES4071_65750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_65750 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_65750 PF00989 PAS fold NIES4071_65770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_65770 PF03466 LysR substrate binding domain NIES4071_65780 PF01925 Sulfite exporter TauE/SafE NIES4071_65810 PF12464 Maltose acetyltransferase NIES4071_65810 PF14602 Hexapeptide repeat of succinyl-transferase NIES4071_65810 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_65830 PF02602 Uroporphyrinogen-III synthase HemD NIES4071_65840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES4071_65860 PF01055 Glycosyl hydrolases family 31 NIES4071_65860 PF13802 Galactose mutarotase-like NIES4071_65860 PF17137 Domain of unknown function (DUF5110) NIES4071_65860 PF16338 Domain of unknown function (DUF4968) NIES4071_65890 PF01212 Beta-eliminating lyase NIES4071_65930 PF00355 Rieske [2Fe-2S] domain NIES4071_65940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_65940 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_65940 PF13426 PAS domain NIES4071_65940 PF00672 HAMP domain NIES4071_65950 PF00005 ABC transporter NIES4071_65970 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NIES4071_65970 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NIES4071_65980 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_65980 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NIES4071_66050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_66050 PF01627 Hpt domain NIES4071_66050 PF00072 Response regulator receiver domain NIES4071_66050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_66090 PF01627 Hpt domain NIES4071_66090 PF00672 HAMP domain NIES4071_66090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_66090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_66090 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_66090 PF00072 Response regulator receiver domain NIES4071_66110 PF00072 Response regulator receiver domain NIES4071_66110 PF00486 Transcriptional regulatory protein, C terminal NIES4071_66120 PF01740 STAS domain NIES4071_66130 PF02585 GlcNAc-PI de-N-acetylase NIES4071_66140 PF00535 Glycosyl transferase family 2 NIES4071_66240 PF02142 MGS-like domain NIES4071_66240 PF01808 AICARFT/IMPCHase bienzyme NIES4071_66350 PF10742 Protein of unknown function (DUF2555) NIES4071_66360 PF04127 DNA / pantothenate metabolism flavoprotein NIES4071_66360 PF02441 Flavoprotein NIES4071_66410 PF00486 Transcriptional regulatory protein, C terminal NIES4071_66410 PF00072 Response regulator receiver domain NIES4071_66420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_66420 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_66420 PF01627 Hpt domain NIES4071_66420 PF00072 Response regulator receiver domain NIES4071_66420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_66420 PF00672 HAMP domain NIES4071_66430 PF00196 Bacterial regulatory proteins, luxR family NIES4071_66430 PF00072 Response regulator receiver domain NIES4071_66440 PF00072 Response regulator receiver domain NIES4071_66440 PF00196 Bacterial regulatory proteins, luxR family NIES4071_66450 PF04226 Transglycosylase associated protein NIES4071_66480 PF06150 ChaB NIES4071_66490 PF00210 Ferritin-like domain NIES4071_66520 PF00009 Elongation factor Tu GTP binding domain NIES4071_66520 PF03144 Elongation factor Tu domain 2 NIES4071_66520 PF03143 Elongation factor Tu C-terminal domain NIES4071_66830 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NIES4071_66830 PF01522 Polysaccharide deacetylase NIES4071_66870 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_66870 PF00672 HAMP domain NIES4071_66870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_66870 PF13426 PAS domain NIES4071_66900 PF00999 Sodium/hydrogen exchanger family NIES4071_66930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIES4071_66940 PF00127 Copper binding proteins, plastocyanin/azurin family NIES4071_66960 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_66970 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_67000 PF13416 Bacterial extracellular solute-binding protein NIES4071_67020 PF00899 ThiF family NIES4071_67030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIES4071_67030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIES4071_67050 PF12965 Domain of unknown function (DUF3854) NIES4071_67100 PF01638 HxlR-like helix-turn-helix NIES4071_67120 PF00124 Photosynthetic reaction centre protein NIES4071_67130 PF03062 MBOAT, membrane-bound O-acyltransferase family NIES4071_67200 PF02545 Maf-like protein NIES4071_67250 PF10042 Uncharacterized conserved protein (DUF2278) NIES4071_67260 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NIES4071_67260 PF07228 Stage II sporulation protein E (SpoIIE) NIES4071_67270 PF00448 SRP54-type protein, GTPase domain NIES4071_67270 PF02881 SRP54-type protein, helical bundle domain NIES4071_67310 PF00535 Glycosyl transferase family 2 NIES4071_67340 PF14245 Type IV pilin PilA NIES4071_67340 PF07963 Prokaryotic N-terminal methylation motif NIES4071_67450 PF00535 Glycosyl transferase family 2 NIES4071_67460 PF00535 Glycosyl transferase family 2 NIES4071_67470 PF00535 Glycosyl transferase family 2 NIES4071_67480 PF07963 Prokaryotic N-terminal methylation motif NIES4071_67480 PF00114 Pilin (bacterial filament) NIES4071_67530 PF13439 Glycosyltransferase Family 4 NIES4071_67530 PF00534 Glycosyl transferases group 1 NIES4071_67710 PF00183 Hsp90 protein NIES4071_67800 PF07724 AAA domain (Cdc48 subfamily) NIES4071_67800 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_67800 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_67800 PF17871 AAA lid domain NIES4071_67800 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_67810 PF04966 Carbohydrate-selective porin, OprB family NIES4071_67810 PF00395 S-layer homology domain NIES4071_67820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES4071_67870 PF00113 Enolase, C-terminal TIM barrel domain NIES4071_67870 PF03952 Enolase, N-terminal domain NIES4071_67940 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIES4071_67940 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIES4071_67950 PF00925 GTP cyclohydrolase II NIES4071_67950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NIES4071_67960 PF00069 Protein kinase domain NIES4071_67960 PF00805 Pentapeptide repeats (8 copies) NIES4071_67970 PF01596 O-methyltransferase NIES4071_67990 PF01807 CHC2 zinc finger NIES4071_67990 PF08275 DNA primase catalytic core, N-terminal domain NIES4071_68000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NIES4071_68010 PF13476 AAA domain NIES4071_68050 PF00989 PAS fold NIES4071_68050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_68050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_68110 PF00355 Rieske [2Fe-2S] domain NIES4071_68130 PF00355 Rieske [2Fe-2S] domain NIES4071_68200 PF06470 SMC proteins Flexible Hinge Domain NIES4071_68200 PF02463 RecF/RecN/SMC N terminal domain NIES4071_68320 PF02581 Thiamine monophosphate synthase NIES4071_68320 PF17792 ThiD2 family NIES4071_68360 PF00005 ABC transporter NIES4071_68420 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_68420 PF00072 Response regulator receiver domain NIES4071_68440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIES4071_68440 PF01411 tRNA synthetases class II (A) NIES4071_68440 PF02272 DHHA1 domain NIES4071_68470 PF00069 Protein kinase domain NIES4071_68510 PF00069 Protein kinase domain NIES4071_68640 PF13274 Protein of unknown function (DUF4065) NIES4071_68660 PF01420 Type I restriction modification DNA specificity domain NIES4071_68670 PF12161 HsdM N-terminal domain NIES4071_68670 PF02384 N-6 DNA Methylase NIES4071_68710 PF08463 EcoEI R protein C-terminal NIES4071_68710 PF00271 Helicase conserved C-terminal domain NIES4071_68710 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NIES4071_68710 PF04851 Type III restriction enzyme, res subunit NIES4071_68750 PF00920 Dehydratase family NIES4071_68790 PF05419 GUN4-like NIES4071_68790 PF16416 ARM-like repeat domain, GUN4-N terminal NIES4071_68810 PF00180 Isocitrate/isopropylmalate dehydrogenase NIES4071_68830 PF00072 Response regulator receiver domain NIES4071_68880 PF00889 Elongation factor TS NIES4071_68900 PF11805 Protein of unknown function (DUF3326) NIES4071_68920 PF01385 Probable transposase NIES4071_68920 PF12323 Helix-turn-helix domain NIES4071_68920 PF07282 Putative transposase DNA-binding domain NIES4071_68950 PF00011 Hsp20/alpha crystallin family NIES4071_69000 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_69010 PF11791 Aconitate B N-terminal domain NIES4071_69010 PF00330 Aconitase family (aconitate hydratase) NIES4071_69010 PF06434 Aconitate hydratase 2 N-terminus NIES4071_69140 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NIES4071_69210 PF01925 Sulfite exporter TauE/SafE NIES4071_69240 PF03466 LysR substrate binding domain NIES4071_69240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_69380 PF01425 Amidase NIES4071_69410 PF03806 AbgT putative transporter family NIES4071_69460 PF01797 Transposase IS200 like NIES4071_69470 PF02683 Cytochrome C biogenesis protein transmembrane region NIES4071_69470 PF00578 AhpC/TSA family NIES4071_69470 PF17991 Thioredoxin like C-terminal domain NIES4071_69490 PF00223 Photosystem I psaA/psaB protein NIES4071_69500 PF00223 Photosystem I psaA/psaB protein NIES4071_69580 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NIES4071_69590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_69630 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_69630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_69630 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_69630 PF01627 Hpt domain NIES4071_69630 PF00072 Response regulator receiver domain NIES4071_69630 PF00989 PAS fold NIES4071_69640 PF01476 LysM domain NIES4071_69640 PF04972 BON domain NIES4071_69650 PF08501 Shikimate dehydrogenase substrate binding domain NIES4071_69650 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NIES4071_69670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NIES4071_69680 PF00905 Penicillin binding protein transpeptidase domain NIES4071_69680 PF00912 Transglycosylase NIES4071_69710 PF01189 16S rRNA methyltransferase RsmB/F NIES4071_69710 PF01029 NusB family NIES4071_69740 PF00483 Nucleotidyl transferase NIES4071_69760 PF01618 MotA/TolQ/ExbB proton channel family NIES4071_69770 PF02472 Biopolymer transport protein ExbD/TolR NIES4071_69790 PF11264 Thylakoid formation protein NIES4071_69800 PF06206 CpeT/CpcT family (DUF1001) NIES4071_69810 PF01740 STAS domain NIES4071_69820 PF01218 Coproporphyrinogen III oxidase NIES4071_69840 PF01883 Iron-sulfur cluster assembly protein NIES4071_69840 PF10609 NUBPL iron-transfer P-loop NTPase NIES4071_69850 PF01098 Cell cycle protein NIES4071_69880 PF00999 Sodium/hydrogen exchanger family NIES4071_69880 PF00582 Universal stress protein family NIES4071_69890 PF01370 NAD dependent epimerase/dehydratase family NIES4071_69900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NIES4071_69900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NIES4071_69900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NIES4071_69930 PF02769 AIR synthase related protein, C-terminal domain NIES4071_69930 PF00586 AIR synthase related protein, N-terminal domain NIES4071_69950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES4071_69950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES4071_69970 PF00764 Arginosuccinate synthase NIES4071_69990 PF09335 SNARE associated Golgi protein NIES4071_70020 PF01250 Ribosomal protein S6 NIES4071_70030 PF01557 Fumarylacetoacetate (FAA) hydrolase family NIES4071_70040 PF16166 Chloroplast import apparatus Tic20-like NIES4071_70090 PF01245 Ribosomal protein L19 NIES4071_70120 PF02357 Transcription termination factor nusG NIES4071_70120 PF00467 KOW motif NIES4071_70140 PF00687 Ribosomal protein L1p/L10e family NIES4071_70160 PF16320 Ribosomal protein L7/L12 dimerisation domain NIES4071_70160 PF00542 Ribosomal protein L7/L12 C-terminal domain NIES4071_70190 PF12169 DNA polymerase III subunits gamma and tau domain III NIES4071_70230 PF07085 DRTGG domain NIES4071_70250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70250 PF01627 Hpt domain NIES4071_70250 PF01584 CheW-like domain NIES4071_70250 PF07194 P2 response regulator binding domain NIES4071_70250 PF02895 Signal transducing histidine kinase, homodimeric domain NIES4071_70260 PF01590 GAF domain NIES4071_70260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_70270 PF14332 Domain of unknown function (DUF4388) NIES4071_70270 PF00072 Response regulator receiver domain NIES4071_70380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_70380 PF00205 Thiamine pyrophosphate enzyme, central domain NIES4071_70380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES4071_70480 PF00069 Protein kinase domain NIES4071_70480 PF00805 Pentapeptide repeats (8 copies) NIES4071_70500 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_70510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70510 PF00672 HAMP domain NIES4071_70510 PF13426 PAS domain NIES4071_70510 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_70520 PF00072 Response regulator receiver domain NIES4071_70530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NIES4071_70560 PF02325 YGGT family NIES4071_70590 PF01593 Flavin containing amine oxidoreductase NIES4071_70610 PF01661 Macro domain NIES4071_70660 PF00529 HlyD membrane-fusion protein of T1SS NIES4071_70660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_70670 PF00211 Adenylate and Guanylate cyclase catalytic domain NIES4071_70690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NIES4071_70720 PF01209 ubiE/COQ5 methyltransferase family NIES4071_70750 PF04542 Sigma-70 region 2 NIES4071_70750 PF00140 Sigma-70 factor, region 1.2 NIES4071_70750 PF04545 Sigma-70, region 4 NIES4071_70750 PF04539 Sigma-70 region 3 NIES4071_70760 PF13188 PAS domain NIES4071_70760 PF08448 PAS fold NIES4071_70760 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_70760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70760 PF00072 Response regulator receiver domain NIES4071_70780 PF10458 Valyl tRNA synthetase tRNA binding arm NIES4071_70780 PF00133 tRNA synthetases class I (I, L, M and V) NIES4071_70780 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NIES4071_70780 PF08264 Anticodon-binding domain of tRNA NIES4071_70790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70790 PF09456 RcsC Alpha-Beta-Loop (ABL) NIES4071_70790 PF00072 Response regulator receiver domain NIES4071_70790 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_70800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70800 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_70800 PF00072 Response regulator receiver domain NIES4071_70800 PF09308 LuxQ, periplasmic NIES4071_70810 PF00486 Transcriptional regulatory protein, C terminal NIES4071_70810 PF00072 Response regulator receiver domain NIES4071_70820 PF01062 Bestrophin, RFP-TM, chloride channel NIES4071_70830 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_70830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70830 PF00672 HAMP domain NIES4071_70830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_70830 PF00072 Response regulator receiver domain NIES4071_70830 PF01627 Hpt domain NIES4071_70840 PF05532 CsbD-like NIES4071_70870 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_70900 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_70900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_70900 PF13188 PAS domain NIES4071_70900 PF00072 Response regulator receiver domain NIES4071_70900 PF08448 PAS fold NIES4071_70910 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_71070 PF00069 Protein kinase domain NIES4071_71110 PF00746 LPXTG cell wall anchor motif NIES4071_71110 PF17961 Bacterial Ig domain NIES4071_71110 PF17210 SdrD B-like domain NIES4071_71110 PF10425 C-terminus of bacterial fibrinogen-binding adhesin NIES4071_71110 PF04650 YSIRK type signal peptide NIES4071_71230 PF01969 Protein of unknown function DUF111 NIES4071_71240 PF01300 Telomere recombination NIES4071_71320 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_71320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_71320 PF00989 PAS fold NIES4071_71330 PF00117 Glutamine amidotransferase class-I NIES4071_71330 PF01171 PP-loop family NIES4071_71330 PF00958 GMP synthase C terminal domain NIES4071_71370 PF10442 FIST C domain NIES4071_71370 PF08495 FIST N domain NIES4071_71380 PF00149 Calcineurin-like phosphoesterase NIES4071_71430 PF07689 KaiB domain NIES4071_71430 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_71430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_71440 PF00072 Response regulator receiver domain NIES4071_71450 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_71450 PF01590 GAF domain NIES4071_71450 PF00360 Phytochrome region NIES4071_71450 PF08446 PAS fold NIES4071_71450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_71480 PF02896 PEP-utilising enzyme, TIM barrel domain NIES4071_71480 PF00391 PEP-utilising enzyme, mobile domain NIES4071_71480 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES4071_71500 PF00486 Transcriptional regulatory protein, C terminal NIES4071_71500 PF00072 Response regulator receiver domain NIES4071_71520 PF00486 Transcriptional regulatory protein, C terminal NIES4071_71520 PF01627 Hpt domain NIES4071_71520 PF00072 Response regulator receiver domain NIES4071_71540 PF00535 Glycosyl transferase family 2 NIES4071_71560 PF00889 Elongation factor TS NIES4071_71580 PF00270 DEAD/DEAH box helicase NIES4071_71580 PF00271 Helicase conserved C-terminal domain NIES4071_71580 PF17191 RecG wedge domain NIES4071_71700 PF00395 S-layer homology domain NIES4071_71700 PF02018 Carbohydrate binding domain NIES4071_71700 PF00331 Glycosyl hydrolase family 10 NIES4071_71700 PF06452 Carbohydrate family 9 binding domain-like NIES4071_71720 PF00027 Cyclic nucleotide-binding domain NIES4071_71720 PF00520 Ion transport protein NIES4071_71730 PF14437 MafB19-like deaminase NIES4071_71740 PF00196 Bacterial regulatory proteins, luxR family NIES4071_71740 PF00072 Response regulator receiver domain NIES4071_71750 PF00989 PAS fold NIES4071_71750 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_71750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_71750 PF00672 HAMP domain NIES4071_71770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_71770 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_71770 PF00072 Response regulator receiver domain NIES4071_71770 PF01627 Hpt domain NIES4071_71780 PF00072 Response regulator receiver domain NIES4071_71810 PF00933 Glycosyl hydrolase family 3 N terminal domain NIES4071_71810 PF01915 Glycosyl hydrolase family 3 C-terminal domain NIES4071_71880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_71880 PF08448 PAS fold NIES4071_71880 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_71880 PF00072 Response regulator receiver domain NIES4071_71880 PF13188 PAS domain NIES4071_71980 PF02941 Ferredoxin thioredoxin reductase variable alpha chain NIES4071_72010 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NIES4071_72060 PF01590 GAF domain NIES4071_72060 PF00360 Phytochrome region NIES4071_72060 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_72060 PF00563 EAL domain NIES4071_72070 PF00072 Response regulator receiver domain NIES4071_72080 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_72080 PF08446 PAS fold NIES4071_72080 PF01590 GAF domain NIES4071_72080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_72080 PF00360 Phytochrome region NIES4071_72090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_72100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NIES4071_72110 PF02311 AraC-like ligand binding domain NIES4071_72110 PF12833 Helix-turn-helix domain NIES4071_72150 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_72160 PF13744 Helix-turn-helix domain NIES4071_72230 PF13087 AAA domain NIES4071_72230 PF13086 AAA domain NIES4071_72230 PF13195 Protein of unknown function (DUF4011) NIES4071_72230 PF13087 AAA domain NIES4071_72230 PF13195 Protein of unknown function (DUF4011) NIES4071_72230 PF13086 AAA domain NIES4071_72240 PF01048 Phosphorylase superfamily NIES4071_72250 PF00171 Aldehyde dehydrogenase family NIES4071_72260 PF04715 Anthranilate synthase component I, N terminal region NIES4071_72260 PF00425 chorismate binding enzyme NIES4071_72280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_72280 PF07689 KaiB domain NIES4071_72280 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_72290 PF13439 Glycosyltransferase Family 4 NIES4071_72320 PF10792 Protein of unknown function (DUF2605) NIES4071_72330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES4071_72330 PF03129 Anticodon binding domain NIES4071_72330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIES4071_72400 PF00255 Glutathione peroxidase NIES4071_72430 PF00793 DAHP synthetase I family NIES4071_72430 PF18152 DAHP synthase ferredoxin-like domain NIES4071_72440 PF06206 CpeT/CpcT family (DUF1001) NIES4071_72460 PF01555 DNA methylase NIES4071_72480 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_72480 PF09308 LuxQ, periplasmic NIES4071_72480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_72480 PF00072 Response regulator receiver domain NIES4071_72490 PF00069 Protein kinase domain NIES4071_72490 PF00805 Pentapeptide repeats (8 copies) NIES4071_72510 PF00484 Carbonic anhydrase NIES4071_72600 PF01850 PIN domain NIES4071_72630 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NIES4071_72680 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NIES4071_72720 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_72740 PF05221 S-adenosyl-L-homocysteine hydrolase NIES4071_72740 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NIES4071_72790 PF13439 Glycosyltransferase Family 4 NIES4071_72810 PF00361 Proton-conducting membrane transporter NIES4071_72820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NIES4071_72820 PF00361 Proton-conducting membrane transporter NIES4071_72830 PF00936 BMC domain NIES4071_72840 PF00936 BMC domain NIES4071_72850 PF03319 Ethanolamine utilisation protein EutN/carboxysome NIES4071_72860 PF00101 Ribulose bisphosphate carboxylase, small chain NIES4071_72890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_72890 PF03466 LysR substrate binding domain NIES4071_72950 PF00248 Aldo/keto reductase family NIES4071_73040 PF07732 Multicopper oxidase NIES4071_73040 PF00394 Multicopper oxidase NIES4071_73040 PF07731 Multicopper oxidase NIES4071_73070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIES4071_73110 PF00421 Photosystem II protein NIES4071_73120 PF00575 S1 RNA binding domain NIES4071_73160 PF00145 C-5 cytosine-specific DNA methylase NIES4071_73190 PF01740 STAS domain NIES4071_73190 PF00916 Sulfate permease family NIES4071_73260 PF02617 ATP-dependent Clp protease adaptor protein ClpS NIES4071_73290 PF00578 AhpC/TSA family NIES4071_73310 PF00578 AhpC/TSA family NIES4071_73320 PF00171 Aldehyde dehydrogenase family NIES4071_73360 PF02384 N-6 DNA Methylase NIES4071_73360 PF12161 HsdM N-terminal domain NIES4071_73430 PF11867 Domain of unknown function (DUF3387) NIES4071_73430 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIES4071_73430 PF18766 SWI2/SNF2 ATPase NIES4071_73480 PF03633 Glycosyl hydrolase family 65, C-terminal domain NIES4071_73480 PF03632 Glycosyl hydrolase family 65 central catalytic domain NIES4071_73480 PF03636 Glycosyl hydrolase family 65, N-terminal domain NIES4071_73490 PF00501 AMP-binding enzyme NIES4071_73490 PF00668 Condensation domain NIES4071_73490 PF13193 AMP-binding enzyme C-terminal domain NIES4071_73490 PF00975 Thioesterase domain NIES4071_73490 PF00550 Phosphopantetheine attachment site NIES4071_73520 PF00069 Protein kinase domain NIES4071_73520 PF03793 PASTA domain NIES4071_73530 PF07690 Major Facilitator Superfamily NIES4071_73550 PF01381 Helix-turn-helix NIES4071_73580 PF13180 PDZ domain NIES4071_73610 PF00400 WD domain, G-beta repeat NIES4071_73720 PF06969 HemN C-terminal domain NIES4071_73720 PF04055 Radical SAM superfamily NIES4071_73730 PF01126 Heme oxygenase NIES4071_73740 PF02915 Rubrerythrin NIES4071_73770 PF08241 Methyltransferase domain NIES4071_73780 PF00535 Glycosyl transferase family 2 NIES4071_73820 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NIES4071_73820 PF01522 Polysaccharide deacetylase NIES4071_73830 PF01522 Polysaccharide deacetylase NIES4071_73830 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NIES4071_73860 PF00310 Glutamine amidotransferases class-II NIES4071_73860 PF04898 Glutamate synthase central domain NIES4071_73860 PF01645 Conserved region in glutamate synthase NIES4071_73860 PF01493 GXGXG motif NIES4071_73880 PF01050 Mannose-6-phosphate isomerase NIES4071_73880 PF00483 Nucleotidyl transferase NIES4071_73890 PF01521 Iron-sulphur cluster biosynthesis NIES4071_73920 PF03144 Elongation factor Tu domain 2 NIES4071_73920 PF00679 Elongation factor G C-terminus NIES4071_73920 PF03764 Elongation factor G, domain IV NIES4071_73920 PF14492 Elongation Factor G, domain II NIES4071_73920 PF00009 Elongation factor Tu GTP binding domain NIES4071_73930 PF03143 Elongation factor Tu C-terminal domain NIES4071_73930 PF03144 Elongation factor Tu domain 2 NIES4071_73930 PF00009 Elongation factor Tu GTP binding domain NIES4071_73950 PF05362 Lon protease (S16) C-terminal proteolytic domain NIES4071_73950 PF02190 ATP-dependent protease La (LON) substrate-binding domain NIES4071_73950 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_73960 PF00800 Prephenate dehydratase NIES4071_73960 PF01842 ACT domain NIES4071_73960 PF01817 Chorismate mutase type II NIES4071_73990 PF10150 Ribonuclease E/G family NIES4071_74040 PF02617 ATP-dependent Clp protease adaptor protein ClpS NIES4071_74090 PF00672 HAMP domain NIES4071_74090 PF01966 HD domain NIES4071_74120 PF08865 Domain of unknown function (DUF1830) NIES4071_74220 PF08402 TOBE domain NIES4071_74220 PF00005 ABC transporter NIES4071_74230 PF00486 Transcriptional regulatory protein, C terminal NIES4071_74230 PF00072 Response regulator receiver domain NIES4071_74250 PF00462 Glutaredoxin NIES4071_74260 PF01722 BolA-like protein NIES4071_74290 PF01483 Proprotein convertase P-domain NIES4071_74290 PF00082 Subtilase family NIES4071_74310 PF14437 MafB19-like deaminase NIES4071_74320 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_74320 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_74330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NIES4071_74360 PF00421 Photosystem II protein NIES4071_74370 PF00805 Pentapeptide repeats (8 copies) NIES4071_74370 PF00069 Protein kinase domain NIES4071_74400 PF01878 EVE domain NIES4071_74410 PF01047 MarR family NIES4071_74430 PF00069 Protein kinase domain NIES4071_74440 PF00805 Pentapeptide repeats (8 copies) NIES4071_74440 PF00069 Protein kinase domain NIES4071_74490 PF01207 Dihydrouridine synthase (Dus) NIES4071_74500 PF01078 Magnesium chelatase, subunit ChlI NIES4071_74500 PF17863 AAA lid domain NIES4071_74500 PF13519 von Willebrand factor type A domain NIES4071_74540 PF00271 Helicase conserved C-terminal domain NIES4071_74540 PF00270 DEAD/DEAH box helicase NIES4071_74600 PF14622 Ribonuclease-III-like NIES4071_74600 PF00035 Double-stranded RNA binding motif NIES4071_74610 PF13520 Amino acid permease NIES4071_74650 PF03040 CemA family NIES4071_74750 PF13193 AMP-binding enzyme C-terminal domain NIES4071_74750 PF00501 AMP-binding enzyme NIES4071_74780 PF12849 PBP superfamily domain NIES4071_74800 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NIES4071_74810 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NIES4071_74820 PF13237 4Fe-4S dicluster domain NIES4071_74840 PF00285 Citrate synthase, C-terminal domain NIES4071_74850 PF00300 Histidine phosphatase superfamily (branch 1) NIES4071_74870 PF00753 Metallo-beta-lactamase superfamily NIES4071_74870 PF12706 Beta-lactamase superfamily domain NIES4071_74880 PF00664 ABC transporter transmembrane region NIES4071_74880 PF03412 Peptidase C39 family NIES4071_74880 PF00005 ABC transporter NIES4071_74980 PF00535 Glycosyl transferase family 2 NIES4071_75000 PF08421 Putative zinc binding domain NIES4071_75000 PF08484 C-methyltransferase C-terminal domain NIES4071_75010 PF00483 Nucleotidyl transferase NIES4071_75020 PF02585 GlcNAc-PI de-N-acetylase NIES4071_75060 PF03412 Peptidase C39 family NIES4071_75060 PF00005 ABC transporter NIES4071_75060 PF00664 ABC transporter transmembrane region NIES4071_75150 PF00535 Glycosyl transferase family 2 NIES4071_75160 PF00535 Glycosyl transferase family 2 NIES4071_75170 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_75180 PF00211 Adenylate and Guanylate cyclase catalytic domain NIES4071_75190 PF00563 EAL domain NIES4071_75190 PF01590 GAF domain NIES4071_75190 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_75190 PF00360 Phytochrome region NIES4071_75230 PF00174 Oxidoreductase molybdopterin binding domain NIES4071_75240 PF01594 AI-2E family transporter NIES4071_75250 PF18460 Heterocyst differentiation regulator C-terminal Hood domain NIES4071_75250 PF03574 Peptidase family S48 NIES4071_75260 PF00892 EamA-like transporter family NIES4071_75320 PF01384 Phosphate transporter family NIES4071_75360 PF00107 Zinc-binding dehydrogenase NIES4071_75360 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_75370 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NIES4071_75370 PF03033 Glycosyltransferase family 28 N-terminal domain NIES4071_75400 PF12728 Helix-turn-helix domain NIES4071_75410 PF12728 Helix-turn-helix domain NIES4071_75450 PF00082 Subtilase family NIES4071_75450 PF05922 Peptidase inhibitor I9 NIES4071_75470 PF00890 FAD binding domain NIES4071_75520 PF01926 50S ribosome-binding GTPase NIES4071_75520 PF06071 Protein of unknown function (DUF933) NIES4071_75550 PF01276 Orn/Lys/Arg decarboxylase, major domain NIES4071_75550 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NIES4071_75560 PF00067 Cytochrome P450 NIES4071_75570 PF03793 PASTA domain NIES4071_75570 PF00069 Protein kinase domain NIES4071_75580 PF00484 Carbonic anhydrase NIES4071_75590 PF02581 Thiamine monophosphate synthase NIES4071_75590 PF03070 TENA/THI-4/PQQC family NIES4071_75590 PF08543 Phosphomethylpyrimidine kinase NIES4071_75710 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NIES4071_75710 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIES4071_75740 PF00781 Diacylglycerol kinase catalytic domain NIES4071_75740 PF02142 MGS-like domain NIES4071_75750 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NIES4071_75750 PF03900 Porphobilinogen deaminase, C-terminal domain NIES4071_75880 PF00072 Response regulator receiver domain NIES4071_75880 PF01627 Hpt domain NIES4071_75880 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_75880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_75880 PF00672 HAMP domain NIES4071_75880 PF17149 Periplasmic sensor domain found in signal transduction proteins NIES4071_75890 PF00072 Response regulator receiver domain NIES4071_75900 PF08460 Bacterial SH3 domain NIES4071_75900 PF01551 Peptidase family M23 NIES4071_75930 PF00795 Carbon-nitrogen hydrolase NIES4071_75950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_75950 PF00989 PAS fold NIES4071_75950 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_75950 PF13188 PAS domain NIES4071_75950 PF13426 PAS domain NIES4071_75980 PF02350 UDP-N-acetylglucosamine 2-epimerase NIES4071_76010 PF00437 Type II/IV secretion system protein NIES4071_76020 PF07689 KaiB domain NIES4071_76040 PF08241 Methyltransferase domain NIES4071_76210 PF00440 Bacterial regulatory proteins, tetR family NIES4071_76240 PF04542 Sigma-70 region 2 NIES4071_76240 PF12680 SnoaL-like domain NIES4071_76240 PF08281 Sigma-70, region 4 NIES4071_76250 PF02525 Flavodoxin-like fold NIES4071_76300 PF00395 S-layer homology domain NIES4071_76300 PF04966 Carbohydrate-selective porin, OprB family NIES4071_76320 PF12833 Helix-turn-helix domain NIES4071_76330 PF00398 Ribosomal RNA adenine dimethylase NIES4071_76380 PF01219 Prokaryotic diacylglycerol kinase NIES4071_76390 PF02885 Glycosyl transferase family, helical bundle domain NIES4071_76390 PF00117 Glutamine amidotransferase class-I NIES4071_76390 PF00591 Glycosyl transferase family, a/b domain NIES4071_76440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_76440 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_76440 PF00072 Response regulator receiver domain NIES4071_76440 PF00989 PAS fold NIES4071_76440 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_76440 PF01627 Hpt domain NIES4071_76450 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_76450 PF08448 PAS fold NIES4071_76450 PF13188 PAS domain NIES4071_76450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_76450 PF00072 Response regulator receiver domain NIES4071_76470 PF01434 Peptidase family M41 NIES4071_76470 PF06480 FtsH Extracellular NIES4071_76470 PF17862 AAA+ lid domain NIES4071_76470 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_76510 PF00145 C-5 cytosine-specific DNA methylase NIES4071_76550 PF03851 UV-endonuclease UvdE NIES4071_76600 PF00400 WD domain, G-beta repeat NIES4071_76620 PF00005 ABC transporter NIES4071_76620 PF03412 Peptidase C39 family NIES4071_76620 PF00664 ABC transporter transmembrane region NIES4071_76720 PF04545 Sigma-70, region 4 NIES4071_76720 PF04542 Sigma-70 region 2 NIES4071_76840 PF03412 Peptidase C39 family NIES4071_76840 PF00005 ABC transporter NIES4071_76840 PF00664 ABC transporter transmembrane region NIES4071_76900 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NIES4071_76910 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NIES4071_77000 PF00400 WD domain, G-beta repeat NIES4071_77020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_77020 PF09308 LuxQ, periplasmic NIES4071_77020 PF00072 Response regulator receiver domain NIES4071_77020 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_77030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_77030 PF01627 Hpt domain NIES4071_77030 PF00072 Response regulator receiver domain NIES4071_77030 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_77030 PF00672 HAMP domain NIES4071_77030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_77050 PF13581 Histidine kinase-like ATPase domain NIES4071_77060 PF01740 STAS domain NIES4071_77070 PF08678 Rsbr N terminal NIES4071_77070 PF01740 STAS domain NIES4071_77090 PF03793 PASTA domain NIES4071_77090 PF00069 Protein kinase domain NIES4071_77100 PF09334 tRNA synthetases class I (M) NIES4071_77100 PF08264 Anticodon-binding domain of tRNA NIES4071_77110 PF01894 Uncharacterised protein family UPF0047 NIES4071_77160 PF10693 Protein of unknown function (DUF2499) NIES4071_77190 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_77190 PF00989 PAS fold NIES4071_77190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_77200 PF02514 CobN/Magnesium Chelatase NIES4071_77210 PF01471 Putative peptidoglycan binding domain NIES4071_77210 PF01510 N-acetylmuramoyl-L-alanine amidase NIES4071_77220 PF01475 Ferric uptake regulator family NIES4071_77230 PF04539 Sigma-70 region 3 NIES4071_77230 PF04542 Sigma-70 region 2 NIES4071_77230 PF00140 Sigma-70 factor, region 1.2 NIES4071_77230 PF04545 Sigma-70, region 4 NIES4071_77250 PF04055 Radical SAM superfamily NIES4071_77300 PF00476 DNA polymerase family A NIES4071_77300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NIES4071_77300 PF01367 5'-3' exonuclease, C-terminal SAM fold NIES4071_77300 PF01612 3'-5' exonuclease NIES4071_77330 PF13545 Crp-like helix-turn-helix domain NIES4071_77340 PF12849 PBP superfamily domain NIES4071_77350 PF00069 Protein kinase domain NIES4071_77360 PF03466 LysR substrate binding domain NIES4071_77360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_77380 PF00085 Thioredoxin NIES4071_77390 PF00361 Proton-conducting membrane transporter NIES4071_77390 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NIES4071_77390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NIES4071_77410 PF00361 Proton-conducting membrane transporter NIES4071_77430 PF01975 Survival protein SurE NIES4071_77460 PF03562 MltA specific insert domain NIES4071_77460 PF06725 3D domain NIES4071_77480 PF13614 AAA domain NIES4071_77520 PF00343 Carbohydrate phosphorylase NIES4071_77540 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_77540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_77540 PF00072 Response regulator receiver domain NIES4071_77540 PF00989 PAS fold NIES4071_77540 PF01627 Hpt domain NIES4071_77540 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_77570 PF02397 Bacterial sugar transferase NIES4071_77610 PF13326 Photosystem II Pbs27 NIES4071_77620 PF04055 Radical SAM superfamily NIES4071_77630 PF00535 Glycosyl transferase family 2 NIES4071_77650 PF05378 Hydantoinase/oxoprolinase N-terminal region NIES4071_77650 PF01968 Hydantoinase/oxoprolinase NIES4071_77700 PF00696 Amino acid kinase family NIES4071_77700 PF00583 Acetyltransferase (GNAT) family NIES4071_77780 PF04966 Carbohydrate-selective porin, OprB family NIES4071_77780 PF00395 S-layer homology domain NIES4071_77790 PF00395 S-layer homology domain NIES4071_77790 PF04966 Carbohydrate-selective porin, OprB family NIES4071_77800 PF13545 Crp-like helix-turn-helix domain NIES4071_77810 PF01895 PhoU domain NIES4071_77820 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_77820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_77820 PF00989 PAS fold NIES4071_77830 PF00486 Transcriptional regulatory protein, C terminal NIES4071_77830 PF00072 Response regulator receiver domain NIES4071_77900 PF01081 KDPG and KHG aldolase NIES4071_77920 PF05239 PRC-barrel domain NIES4071_77920 PF09557 Domain of unknown function (DUF2382) NIES4071_77950 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIES4071_77950 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NIES4071_77970 PF01842 ACT domain NIES4071_77970 PF00742 Homoserine dehydrogenase NIES4071_77970 PF03447 Homoserine dehydrogenase, NAD binding domain NIES4071_77990 PF00485 Phosphoribulokinase / Uridine kinase family NIES4071_78000 PF02773 S-adenosylmethionine synthetase, C-terminal domain NIES4071_78000 PF02772 S-adenosylmethionine synthetase, central domain NIES4071_78000 PF00438 S-adenosylmethionine synthetase, N-terminal domain NIES4071_78010 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_78010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_78010 PF00989 PAS fold NIES4071_78040 PF01551 Peptidase family M23 NIES4071_78040 PF01476 LysM domain NIES4071_78050 PF13180 PDZ domain NIES4071_78080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NIES4071_78090 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NIES4071_78120 PF01040 UbiA prenyltransferase family NIES4071_78130 PF02541 Ppx/GppA phosphatase family NIES4071_78170 PF00892 EamA-like transporter family NIES4071_78180 PF01471 Putative peptidoglycan binding domain NIES4071_78180 PF01510 N-acetylmuramoyl-L-alanine amidase NIES4071_78220 PF00534 Glycosyl transferases group 1 NIES4071_78220 PF13439 Glycosyltransferase Family 4 NIES4071_78230 PF00675 Insulinase (Peptidase family M16) NIES4071_78230 PF05193 Peptidase M16 inactive domain NIES4071_78240 PF05193 Peptidase M16 inactive domain NIES4071_78240 PF00675 Insulinase (Peptidase family M16) NIES4071_78250 PF00440 Bacterial regulatory proteins, tetR family NIES4071_78290 PF00557 Metallopeptidase family M24 NIES4071_78290 PF05195 Aminopeptidase P, N-terminal domain NIES4071_78320 PF02881 SRP54-type protein, helical bundle domain NIES4071_78320 PF00448 SRP54-type protein, GTPase domain NIES4071_78320 PF02978 Signal peptide binding domain NIES4071_78360 PF02562 PhoH-like protein NIES4071_78370 PF01590 GAF domain NIES4071_78370 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_78370 PF00360 Phytochrome region NIES4071_78370 PF00563 EAL domain NIES4071_78390 PF08239 Bacterial SH3 domain NIES4071_78390 PF00069 Protein kinase domain NIES4071_78400 PF00069 Protein kinase domain NIES4071_78400 PF08239 Bacterial SH3 domain NIES4071_78450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_78520 PF00266 Aminotransferase class-V NIES4071_78540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_78540 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_78540 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_78580 PF06772 Bacterial low temperature requirement A protein (LtrA) NIES4071_78590 PF01555 DNA methylase NIES4071_78620 PF03193 RsgA GTPase NIES4071_78640 PF00158 Sigma-54 interaction domain NIES4071_78640 PF01590 GAF domain NIES4071_78640 PF02954 Bacterial regulatory protein, Fis family NIES4071_78660 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NIES4071_78680 PF00364 Biotin-requiring enzyme NIES4071_78690 PF01022 Bacterial regulatory protein, arsR family NIES4071_78730 PF00664 ABC transporter transmembrane region NIES4071_78730 PF00005 ABC transporter NIES4071_78820 PF00067 Cytochrome P450 NIES4071_78890 PF13417 Glutathione S-transferase, N-terminal domain NIES4071_78920 PF04542 Sigma-70 region 2 NIES4071_78920 PF04545 Sigma-70, region 4 NIES4071_78920 PF04539 Sigma-70 region 3 NIES4071_78920 PF00140 Sigma-70 factor, region 1.2 NIES4071_78980 PF01266 FAD dependent oxidoreductase NIES4071_78980 PF05690 Thiazole biosynthesis protein ThiG NIES4071_78990 PF12697 Alpha/beta hydrolase family NIES4071_79020 PF00667 FAD binding domain NIES4071_79020 PF00258 Flavodoxin NIES4071_79020 PF00175 Oxidoreductase NAD-binding domain NIES4071_79020 PF00067 Cytochrome P450 NIES4071_79030 PF00440 Bacterial regulatory proteins, tetR family NIES4071_79030 PF08359 YsiA-like protein, C-terminal region NIES4071_79200 PF00005 ABC transporter NIES4071_79210 PF01297 Zinc-uptake complex component A periplasmic NIES4071_79220 PF04966 Carbohydrate-selective porin, OprB family NIES4071_79220 PF00395 S-layer homology domain NIES4071_79270 PF00124 Photosynthetic reaction centre protein NIES4071_79300 PF00501 AMP-binding enzyme NIES4071_79300 PF13193 AMP-binding enzyme C-terminal domain NIES4071_79460 PF02754 Cysteine-rich domain NIES4071_79470 PF00550 Phosphopantetheine attachment site NIES4071_79480 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES4071_79480 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES4071_79490 PF02779 Transketolase, pyrimidine binding domain NIES4071_79490 PF02780 Transketolase, C-terminal domain NIES4071_79490 PF00456 Transketolase, thiamine diphosphate binding domain NIES4071_79610 PF01207 Dihydrouridine synthase (Dus) NIES4071_79620 PF00805 Pentapeptide repeats (8 copies) NIES4071_79620 PF00069 Protein kinase domain NIES4071_79630 PF05050 Methyltransferase FkbM domain NIES4071_79650 PF02915 Rubrerythrin NIES4071_79710 PF02597 ThiS family NIES4071_79720 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_79750 PF00069 Protein kinase domain NIES4071_79750 PF03793 PASTA domain NIES4071_79780 PF00425 chorismate binding enzyme NIES4071_79790 PF01040 UbiA prenyltransferase family NIES4071_79800 PF13378 Enolase C-terminal domain-like NIES4071_79810 PF00698 Acyl transferase domain NIES4071_79820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIES4071_79820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NIES4071_79830 PF02504 Fatty acid synthesis protein NIES4071_79840 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NIES4071_79870 PF08264 Anticodon-binding domain of tRNA NIES4071_79870 PF00133 tRNA synthetases class I (I, L, M and V) NIES4071_79870 PF09334 tRNA synthetases class I (M) NIES4071_79930 PF08447 PAS fold NIES4071_79930 PF08448 PAS fold NIES4071_79930 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_79930 PF00563 EAL domain NIES4071_79940 PF00486 Transcriptional regulatory protein, C terminal NIES4071_79940 PF00072 Response regulator receiver domain NIES4071_79950 PF00989 PAS fold NIES4071_79950 PF01627 Hpt domain NIES4071_79950 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_79950 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_79950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_79950 PF00072 Response regulator receiver domain NIES4071_79990 PF00883 Cytosol aminopeptidase family, catalytic domain NIES4071_79990 PF02789 Cytosol aminopeptidase family, N-terminal domain NIES4071_80020 PF00085 Thioredoxin NIES4071_80030 PF00478 IMP dehydrogenase / GMP reductase domain NIES4071_80030 PF00571 CBS domain NIES4071_80040 PF00488 MutS domain V NIES4071_80040 PF01713 Smr domain NIES4071_80120 PF00482 Type II secretion system (T2SS), protein F NIES4071_80130 PF00437 Type II/IV secretion system protein NIES4071_80140 PF00437 Type II/IV secretion system protein NIES4071_80170 PF00012 Hsp70 protein NIES4071_80180 PF00226 DnaJ domain NIES4071_80180 PF01556 DnaJ C terminal domain NIES4071_80180 PF00684 DnaJ central domain NIES4071_80210 PF12697 Alpha/beta hydrolase family NIES4071_80240 PF03816 Cell envelope-related transcriptional attenuator domain NIES4071_80260 PF01594 AI-2E family transporter NIES4071_80300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NIES4071_80300 PF02222 ATP-grasp domain NIES4071_80310 PF00675 Insulinase (Peptidase family M16) NIES4071_80310 PF05193 Peptidase M16 inactive domain NIES4071_80320 PF05193 Peptidase M16 inactive domain NIES4071_80320 PF00675 Insulinase (Peptidase family M16) NIES4071_80330 PF01471 Putative peptidoglycan binding domain NIES4071_80330 PF07486 Cell Wall Hydrolase NIES4071_80420 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_80420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_80420 PF07689 KaiB domain NIES4071_80430 PF00293 NUDIX domain NIES4071_80450 PF00140 Sigma-70 factor, region 1.2 NIES4071_80450 PF04539 Sigma-70 region 3 NIES4071_80450 PF04545 Sigma-70, region 4 NIES4071_80450 PF04542 Sigma-70 region 2 NIES4071_80460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIES4071_80460 PF02142 MGS-like domain NIES4071_80460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NIES4071_80470 PF00210 Ferritin-like domain NIES4071_80510 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_80520 PF00005 ABC transporter NIES4071_80540 PF01627 Hpt domain NIES4071_80540 PF00072 Response regulator receiver domain NIES4071_80540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_80540 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_80540 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_80550 PF13476 AAA domain NIES4071_80580 PF01042 Endoribonuclease L-PSP NIES4071_80600 PF00293 NUDIX domain NIES4071_80610 PF02446 4-alpha-glucanotransferase NIES4071_80630 PF00849 RNA pseudouridylate synthase NIES4071_80630 PF01479 S4 domain NIES4071_80670 PF05175 Methyltransferase small domain NIES4071_80680 PF00069 Protein kinase domain NIES4071_80690 PF08239 Bacterial SH3 domain NIES4071_80690 PF00069 Protein kinase domain NIES4071_80810 PF02416 mttA/Hcf106 family NIES4071_80830 PF03575 Peptidase family S51 NIES4071_80840 PF01746 tRNA (Guanine-1)-methyltransferase NIES4071_80850 PF02542 YgbB family NIES4071_80880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIES4071_80900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIES4071_80910 PF00731 AIR carboxylase NIES4071_80930 PF00206 Lyase NIES4071_80930 PF14698 Argininosuccinate lyase C-terminal NIES4071_80950 PF00293 NUDIX domain NIES4071_80950 PF13344 Haloacid dehalogenase-like hydrolase NIES4071_80960 PF12697 Alpha/beta hydrolase family NIES4071_80970 PF03309 Type III pantothenate kinase NIES4071_80980 PF01613 Flavin reductase like domain NIES4071_80980 PF00753 Metallo-beta-lactamase superfamily NIES4071_80990 PF00258 Flavodoxin NIES4071_80990 PF01613 Flavin reductase like domain NIES4071_81040 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NIES4071_81100 PF01926 50S ribosome-binding GTPase NIES4071_81100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIES4071_81130 PF00069 Protein kinase domain NIES4071_81130 PF03793 PASTA domain NIES4071_81240 PF01590 GAF domain NIES4071_81240 PF00563 EAL domain NIES4071_81240 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_81240 PF00360 Phytochrome region NIES4071_81270 PF11016 Protein of unknown function (DUF2854) NIES4071_81290 PF00005 ABC transporter NIES4071_81310 PF01668 SmpB protein NIES4071_81340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_81340 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_81350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIES4071_81410 PF00245 Alkaline phosphatase NIES4071_81420 PF00596 Class II Aldolase and Adducin N-terminal domain NIES4071_81430 PF00571 CBS domain NIES4071_81430 PF00478 IMP dehydrogenase / GMP reductase domain NIES4071_81480 PF00486 Transcriptional regulatory protein, C terminal NIES4071_81480 PF00072 Response regulator receiver domain NIES4071_81490 PF06745 KaiC NIES4071_81490 PF18073 Rubredoxin metal binding domain NIES4071_81530 PF00069 Protein kinase domain NIES4071_81550 PF00069 Protein kinase domain NIES4071_81590 PF02576 RimP N-terminal domain NIES4071_81600 PF00575 S1 RNA binding domain NIES4071_81600 PF08529 NusA N-terminal domain NIES4071_81600 PF13184 NusA-like KH domain NIES4071_81630 PF04760 Translation initiation factor IF-2, N-terminal region NIES4071_81630 PF11987 Translation-initiation factor 2 NIES4071_81630 PF00009 Elongation factor Tu GTP binding domain NIES4071_81680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_81690 PF00873 AcrB/AcrD/AcrF family NIES4071_81700 PF13439 Glycosyltransferase Family 4 NIES4071_81700 PF00534 Glycosyl transferases group 1 NIES4071_81710 PF00535 Glycosyl transferase family 2 NIES4071_81730 PF00145 C-5 cytosine-specific DNA methylase NIES4071_81750 PF11967 Recombination protein O N terminal NIES4071_81750 PF02565 Recombination protein O C terminal NIES4071_81760 PF05977 Transmembrane secretion effector NIES4071_81770 PF00534 Glycosyl transferases group 1 NIES4071_81770 PF13439 Glycosyltransferase Family 4 NIES4071_81780 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_81780 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_81780 PF17871 AAA lid domain NIES4071_81780 PF07724 AAA domain (Cdc48 subfamily) NIES4071_81780 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_81800 PF01066 CDP-alcohol phosphatidyltransferase NIES4071_81840 PF10415 Fumarase C C-terminus NIES4071_81840 PF00206 Lyase NIES4071_81850 PF04015 Domain of unknown function (DUF362) NIES4071_81870 PF00719 Inorganic pyrophosphatase NIES4071_81900 PF02885 Glycosyl transferase family, helical bundle domain NIES4071_81900 PF00591 Glycosyl transferase family, a/b domain NIES4071_81910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_81910 PF03466 LysR substrate binding domain NIES4071_81960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES4071_81960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES4071_81980 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_81990 PF00005 ABC transporter NIES4071_82000 PF00005 ABC transporter NIES4071_82010 PF07690 Major Facilitator Superfamily NIES4071_82020 PF01568 Molydopterin dinucleotide binding domain NIES4071_82020 PF00384 Molybdopterin oxidoreductase NIES4071_82020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIES4071_82110 PF01965 DJ-1/PfpI family NIES4071_82190 PF00072 Response regulator receiver domain NIES4071_82190 PF00486 Transcriptional regulatory protein, C terminal NIES4071_82200 PF00535 Glycosyl transferase family 2 NIES4071_82220 PF00595 PDZ domain NIES4071_82220 PF03572 Peptidase family S41 NIES4071_82280 PF00672 HAMP domain NIES4071_82280 PF13426 PAS domain NIES4071_82280 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_82280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_82300 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NIES4071_82300 PF17768 RecJ OB domain NIES4071_82300 PF02272 DHHA1 domain NIES4071_82300 PF01368 DHH family NIES4071_82320 PF03130 PBS lyase HEAT-like repeat NIES4071_82330 PF01383 CpcD/allophycocyanin linker domain NIES4071_82340 PF01383 CpcD/allophycocyanin linker domain NIES4071_82340 PF00427 Phycobilisome Linker polypeptide NIES4071_82350 PF00502 Phycobilisome protein NIES4071_82360 PF00502 Phycobilisome protein NIES4071_82370 PF09367 CpeS-like protein NIES4071_82420 PF04226 Transglycosylase associated protein NIES4071_82430 PF05532 CsbD-like NIES4071_82440 PF00072 Response regulator receiver domain NIES4071_82440 PF00196 Bacterial regulatory proteins, luxR family NIES4071_82460 PF13181 Tetratricopeptide repeat NIES4071_82460 PF00535 Glycosyl transferase family 2 NIES4071_82470 PF00155 Aminotransferase class I and II NIES4071_82480 PF00891 O-methyltransferase domain NIES4071_82500 PF01593 Flavin containing amine oxidoreductase NIES4071_82740 PF08546 Ketopantoate reductase PanE/ApbA C terminal NIES4071_82740 PF02558 Ketopantoate reductase PanE/ApbA NIES4071_82780 PF00501 AMP-binding enzyme NIES4071_82780 PF13193 AMP-binding enzyme C-terminal domain NIES4071_82840 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_82860 PF00931 NB-ARC domain NIES4071_82860 PF00400 WD domain, G-beta repeat NIES4071_82970 PF00533 BRCA1 C Terminus (BRCT) domain NIES4071_82970 PF01653 NAD-dependent DNA ligase adenylation domain NIES4071_82970 PF03120 NAD-dependent DNA ligase OB-fold domain NIES4071_82970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NIES4071_82970 PF12826 Helix-hairpin-helix motif NIES4071_82990 PF00072 Response regulator receiver domain NIES4071_83000 PF00072 Response regulator receiver domain NIES4071_83000 PF09308 LuxQ, periplasmic NIES4071_83000 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_83000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_83010 PF07969 Amidohydrolase family NIES4071_83040 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_83040 PF08448 PAS fold NIES4071_83040 PF13426 PAS domain NIES4071_83040 PF00072 Response regulator receiver domain NIES4071_83040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_83070 PF00155 Aminotransferase class I and II NIES4071_83090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_83090 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_83100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_83100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES4071_83210 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_83230 PF07690 Major Facilitator Superfamily NIES4071_83290 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES4071_83290 PF00391 PEP-utilising enzyme, mobile domain NIES4071_83330 PF00005 ABC transporter NIES4071_83330 PF00664 ABC transporter transmembrane region NIES4071_83340 PF00144 Beta-lactamase NIES4071_83370 PF00873 AcrB/AcrD/AcrF family NIES4071_83410 PF09559 Cas6 Crispr NIES4071_83420 PF18019 HD domain NIES4071_83440 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 NIES4071_83460 PF01867 CRISPR associated protein Cas1 NIES4071_83460 PF01930 Domain of unknown function DUF83 NIES4071_83470 PF09827 CRISPR associated protein Cas2 NIES4071_83570 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_83570 PF00107 Zinc-binding dehydrogenase NIES4071_83630 PF00069 Protein kinase domain NIES4071_83630 PF03793 PASTA domain NIES4071_83670 PF18337 RapA N-terminal Tudor like domain NIES4071_83670 PF00176 SNF2 family N-terminal domain NIES4071_83670 PF12137 RNA polymerase recycling family C-terminal NIES4071_83670 PF00271 Helicase conserved C-terminal domain NIES4071_83670 PF18339 RapA N-terminal Tudor like domain 1 NIES4071_83760 PF01555 DNA methylase NIES4071_83930 PF01124 MAPEG family NIES4071_83980 PF00534 Glycosyl transferases group 1 NIES4071_83990 PF00535 Glycosyl transferase family 2 NIES4071_84040 PF13439 Glycosyltransferase Family 4 NIES4071_84040 PF00534 Glycosyl transferases group 1 NIES4071_84090 PF00132 Bacterial transferase hexapeptide (six repeats) NIES4071_84100 PF02706 Chain length determinant protein NIES4071_84100 PF13807 G-rich domain on putative tyrosine kinase NIES4071_84100 PF13614 AAA domain NIES4071_84110 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES4071_84160 PF08239 Bacterial SH3 domain NIES4071_84160 PF01520 N-acetylmuramoyl-L-alanine amidase NIES4071_84200 PF00535 Glycosyl transferase family 2 NIES4071_84200 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NIES4071_84230 PF01555 DNA methylase NIES4071_84240 PF00480 ROK family NIES4071_84260 PF12911 N-terminal TM domain of oligopeptide transport permease C NIES4071_84260 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_84270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_84350 PF16363 GDP-mannose 4,6 dehydratase NIES4071_84370 PF14245 Type IV pilin PilA NIES4071_84370 PF07963 Prokaryotic N-terminal methylation motif NIES4071_84400 PF01728 FtsJ-like methyltransferase NIES4071_84490 PF00069 Protein kinase domain NIES4071_84490 PF00805 Pentapeptide repeats (8 copies) NIES4071_84510 PF13426 PAS domain NIES4071_84510 PF00672 HAMP domain NIES4071_84510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_84510 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_84520 PF00849 RNA pseudouridylate synthase NIES4071_84550 PF00684 DnaJ central domain NIES4071_84550 PF01556 DnaJ C terminal domain NIES4071_84550 PF00226 DnaJ domain NIES4071_84600 PF00550 Phosphopantetheine attachment site NIES4071_84610 PF00350 Dynamin family NIES4071_84630 PF00156 Phosphoribosyl transferase domain NIES4071_84670 PF01595 Cyclin M transmembrane N-terminal domain NIES4071_84670 PF03471 Transporter associated domain NIES4071_84670 PF00571 CBS domain NIES4071_84680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NIES4071_84680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NIES4071_84690 PF09335 SNARE associated Golgi protein NIES4071_84830 PF01725 Ham1 family NIES4071_84840 PF00543 Nitrogen regulatory protein P-II NIES4071_84860 PF08543 Phosphomethylpyrimidine kinase NIES4071_84870 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_84870 PF00989 PAS fold NIES4071_84870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_84890 PF04151 Bacterial pre-peptidase C-terminal domain NIES4071_84890 PF00082 Subtilase family NIES4071_84930 PF02698 DUF218 domain NIES4071_84950 PF07685 CobB/CobQ-like glutamine amidotransferase domain NIES4071_84970 PF08353 Domain of unknown function (DUF1727) NIES4071_84970 PF08245 Mur ligase middle domain NIES4071_85020 PF00069 Protein kinase domain NIES4071_85020 PF00805 Pentapeptide repeats (8 copies) NIES4071_85040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIES4071_85040 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NIES4071_85090 PF03471 Transporter associated domain NIES4071_85090 PF02080 TrkA-C domain NIES4071_85090 PF00999 Sodium/hydrogen exchanger family NIES4071_85260 PF06827 Zinc finger found in FPG and IleRS NIES4071_85260 PF00133 tRNA synthetases class I (I, L, M and V) NIES4071_85260 PF08264 Anticodon-binding domain of tRNA NIES4071_85330 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_85370 PF00072 Response regulator receiver domain NIES4071_85370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_85370 PF13426 PAS domain NIES4071_85410 PF04493 Endonuclease V NIES4071_85450 PF00805 Pentapeptide repeats (8 copies) NIES4071_85450 PF00069 Protein kinase domain NIES4071_85460 PF02142 MGS-like domain NIES4071_85540 PF13426 PAS domain NIES4071_85540 PF00672 HAMP domain NIES4071_85540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_85540 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_85550 PF00196 Bacterial regulatory proteins, luxR family NIES4071_85550 PF00072 Response regulator receiver domain NIES4071_85580 PF00657 GDSL-like Lipase/Acylhydrolase NIES4071_85630 PF00579 tRNA synthetases class I (W and Y) NIES4071_85700 PF00067 Cytochrome P450 NIES4071_85930 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_85950 PF00069 Protein kinase domain NIES4071_85960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIES4071_85970 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NIES4071_86020 PF08479 POTRA domain, ShlB-type NIES4071_86020 PF17287 POTRA domain NIES4071_86020 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NIES4071_86050 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_86060 PF01758 Sodium Bile acid symporter family NIES4071_86070 PF00923 Transaldolase/Fructose-6-phosphate aldolase NIES4071_86110 PF00732 GMC oxidoreductase NIES4071_86110 PF05199 GMC oxidoreductase NIES4071_86170 PF02898 Nitric oxide synthase, oxygenase domain NIES4071_86190 PF07690 Major Facilitator Superfamily NIES4071_86230 PF02954 Bacterial regulatory protein, Fis family NIES4071_86230 PF00072 Response regulator receiver domain NIES4071_86230 PF00158 Sigma-54 interaction domain NIES4071_86240 PF00072 Response regulator receiver domain NIES4071_86240 PF13426 PAS domain NIES4071_86240 PF08448 PAS fold NIES4071_86240 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_86240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_86250 PF01739 CheR methyltransferase, SAM binding domain NIES4071_86250 PF03705 CheR methyltransferase, all-alpha domain NIES4071_86250 PF08448 PAS fold NIES4071_86250 PF01339 CheB methylesterase NIES4071_86260 PF08448 PAS fold NIES4071_86260 PF03705 CheR methyltransferase, all-alpha domain NIES4071_86260 PF01339 CheB methylesterase NIES4071_86260 PF01739 CheR methyltransferase, SAM binding domain NIES4071_86270 PF01471 Putative peptidoglycan binding domain NIES4071_86270 PF01520 N-acetylmuramoyl-L-alanine amidase NIES4071_86330 PF00486 Transcriptional regulatory protein, C terminal NIES4071_86330 PF00072 Response regulator receiver domain NIES4071_86330 PF01627 Hpt domain NIES4071_86360 PF00400 WD domain, G-beta repeat NIES4071_86370 PF00400 WD domain, G-beta repeat NIES4071_86370 PF00931 NB-ARC domain NIES4071_86420 PF07977 FabA-like domain NIES4071_86430 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NIES4071_86440 PF07244 Surface antigen variable number repeat NIES4071_86440 PF01103 Surface antigen NIES4071_86450 PF01259 SAICAR synthetase NIES4071_86470 PF00211 Adenylate and Guanylate cyclase catalytic domain NIES4071_86480 PF00534 Glycosyl transferases group 1 NIES4071_86480 PF13439 Glycosyltransferase Family 4 NIES4071_86490 PF01370 NAD dependent epimerase/dehydratase family NIES4071_86510 PF06480 FtsH Extracellular NIES4071_86510 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_86510 PF01434 Peptidase family M41 NIES4071_86510 PF17862 AAA+ lid domain NIES4071_86760 PF00565 Staphylococcal nuclease homologue NIES4071_86810 PF08544 GHMP kinases C terminal NIES4071_86810 PF00288 GHMP kinases N terminal domain NIES4071_86830 PF00361 Proton-conducting membrane transporter NIES4071_86890 PF00069 Protein kinase domain NIES4071_86890 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_86910 PF01425 Amidase NIES4071_86920 PF12833 Helix-turn-helix domain NIES4071_86920 PF01965 DJ-1/PfpI family NIES4071_87010 PF00069 Protein kinase domain NIES4071_87020 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_87020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_87020 PF00072 Response regulator receiver domain NIES4071_87020 PF09308 LuxQ, periplasmic NIES4071_87060 PF00395 S-layer homology domain NIES4071_87060 PF04966 Carbohydrate-selective porin, OprB family NIES4071_87070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NIES4071_87080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NIES4071_87090 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NIES4071_87100 PF00301 Rubredoxin NIES4071_87120 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits NIES4071_87120 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit NIES4071_87190 PF04542 Sigma-70 region 2 NIES4071_87190 PF04539 Sigma-70 region 3 NIES4071_87190 PF04545 Sigma-70, region 4 NIES4071_87210 PF01716 Manganese-stabilising protein / photosystem II polypeptide NIES4071_87270 PF00091 Tubulin/FtsZ family, GTPase domain NIES4071_87270 PF12327 FtsZ family, C-terminal domain NIES4071_87280 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NIES4071_87280 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NIES4071_87290 PF00462 Glutaredoxin NIES4071_87330 PF13167 GTP-binding GTPase N-terminal NIES4071_87330 PF16360 GTP-binding GTPase Middle Region NIES4071_87330 PF01926 50S ribosome-binding GTPase NIES4071_87350 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system NIES4071_87460 PF00124 Photosynthetic reaction centre protein NIES4071_87500 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_87500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_87590 PF12849 PBP superfamily domain NIES4071_87600 PF00009 Elongation factor Tu GTP binding domain NIES4071_87600 PF00679 Elongation factor G C-terminus NIES4071_87600 PF03764 Elongation factor G, domain IV NIES4071_87600 PF03144 Elongation factor Tu domain 2 NIES4071_87600 PF14492 Elongation Factor G, domain II NIES4071_87640 PF00196 Bacterial regulatory proteins, luxR family NIES4071_87640 PF00072 Response regulator receiver domain NIES4071_87660 PF07730 Histidine kinase NIES4071_87680 PF13683 Integrase core domain NIES4071_87680 PF01610 Transposase NIES4071_87710 PF07015 VirC1 protein NIES4071_87830 PF01255 Putative undecaprenyl diphosphate synthase NIES4071_87860 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_87860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_87860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_87860 PF00672 HAMP domain NIES4071_87860 PF00072 Response regulator receiver domain NIES4071_87860 PF01627 Hpt domain NIES4071_87940 PF00664 ABC transporter transmembrane region NIES4071_87940 PF00005 ABC transporter NIES4071_87980 PF00535 Glycosyl transferase family 2 NIES4071_88000 PF16123 Hydroxyacylglutathione hydrolase C-terminus NIES4071_88000 PF00753 Metallo-beta-lactamase superfamily NIES4071_88010 PF01501 Glycosyl transferase family 8 NIES4071_88040 PF13545 Crp-like helix-turn-helix domain NIES4071_88050 PF03633 Glycosyl hydrolase family 65, C-terminal domain NIES4071_88050 PF03632 Glycosyl hydrolase family 65 central catalytic domain NIES4071_88050 PF03636 Glycosyl hydrolase family 65, N-terminal domain NIES4071_88060 PF00534 Glycosyl transferases group 1 NIES4071_88060 PF00862 Sucrose synthase NIES4071_88080 PF14497 Glutathione S-transferase, C-terminal domain NIES4071_88080 PF02798 Glutathione S-transferase, N-terminal domain NIES4071_88100 PF03466 LysR substrate binding domain NIES4071_88100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_88130 PF00075 RNase H NIES4071_88180 PF00829 Ribosomal prokaryotic L21 protein NIES4071_88210 PF01078 Magnesium chelatase, subunit ChlI NIES4071_88210 PF17863 AAA lid domain NIES4071_88230 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NIES4071_88230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NIES4071_88260 PF00005 ABC transporter NIES4071_88290 PF01223 DNA/RNA non-specific endonuclease NIES4071_88340 PF00085 Thioredoxin NIES4071_88370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIES4071_88370 PF01842 ACT domain NIES4071_88370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIES4071_88440 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NIES4071_88440 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NIES4071_88460 PF00101 Ribulose bisphosphate carboxylase, small chain NIES4071_88550 PF00483 Nucleotidyl transferase NIES4071_88580 PF01048 Phosphorylase superfamily NIES4071_88590 PF00563 EAL domain NIES4071_88590 PF00498 FHA domain NIES4071_88590 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_88620 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_88620 PF17866 AAA lid domain NIES4071_88750 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_88750 PF07724 AAA domain (Cdc48 subfamily) NIES4071_88750 PF17871 AAA lid domain NIES4071_88750 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_88750 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_88770 PF00916 Sulfate permease family NIES4071_88770 PF01740 STAS domain NIES4071_88780 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES4071_88780 PF00355 Rieske [2Fe-2S] domain NIES4071_88820 PF13538 UvrD-like helicase C-terminal domain NIES4071_88820 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NIES4071_88820 PF14490 Helix-hairpin-helix containing domain NIES4071_88850 PF16655 PhoD-like phosphatase, N-terminal domain NIES4071_88850 PF09423 PhoD-like phosphatase NIES4071_88870 PF01070 FMN-dependent dehydrogenase NIES4071_88880 PF00484 Carbonic anhydrase NIES4071_88900 PF01739 CheR methyltransferase, SAM binding domain NIES4071_88900 PF03705 CheR methyltransferase, all-alpha domain NIES4071_88910 PF01960 ArgJ family NIES4071_88920 PF02934 GatB/GatE catalytic domain NIES4071_88920 PF02637 GatB domain NIES4071_88930 PF13649 Methyltransferase domain NIES4071_88960 PF04675 DNA ligase N terminus NIES4071_88960 PF04679 ATP dependent DNA ligase C terminal region NIES4071_88960 PF01068 ATP dependent DNA ligase domain NIES4071_89000 PF01281 Ribosomal protein L9, N-terminal domain NIES4071_89000 PF03948 Ribosomal protein L9, C-terminal domain NIES4071_89010 PF04989 Cephalosporin hydroxylase NIES4071_89040 PF00772 DnaB-like helicase N terminal domain NIES4071_89040 PF03796 DnaB-like helicase C terminal domain NIES4071_89040 PF14528 LAGLIDADG-like domain NIES4071_89050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIES4071_89090 PF03167 Uracil DNA glycosylase superfamily NIES4071_89130 PF08719 Domain of unknown function (DUF1768) NIES4071_89170 PF02374 Anion-transporting ATPase NIES4071_89170 PF17886 HSP20-like domain found in ArsA NIES4071_89190 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES4071_89190 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_89190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_89200 PF02768 DNA polymerase III beta subunit, C-terminal domain NIES4071_89200 PF00712 DNA polymerase III beta subunit, N-terminal domain NIES4071_89200 PF02767 DNA polymerase III beta subunit, central domain NIES4071_89210 PF00308 Bacterial dnaA protein NIES4071_89210 PF08299 Bacterial dnaA protein helix-turn-helix NIES4071_89210 PF11638 DnaA N-terminal domain NIES4071_89220 PF13180 PDZ domain NIES4071_89240 PF01327 Polypeptide deformylase NIES4071_89260 PF00403 Heavy-metal-associated domain NIES4071_89320 PF01381 Helix-turn-helix NIES4071_89370 PF02733 Dak1 domain NIES4071_89380 PF02734 DAK2 domain NIES4071_89390 PF02896 PEP-utilising enzyme, TIM barrel domain NIES4071_89390 PF00391 PEP-utilising enzyme, mobile domain NIES4071_89390 PF05524 PEP-utilising enzyme, N-terminal NIES4071_89460 PF01612 3'-5' exonuclease NIES4071_89460 PF00570 HRDC domain NIES4071_89510 PF00440 Bacterial regulatory proteins, tetR family NIES4071_89520 PF00266 Aminotransferase class-V NIES4071_89530 PF03358 NADPH-dependent FMN reductase NIES4071_89570 PF00875 DNA photolyase NIES4071_89570 PF03441 FAD binding domain of DNA photolyase NIES4071_89670 PF02780 Transketolase, C-terminal domain NIES4071_89670 PF02779 Transketolase, pyrimidine binding domain NIES4071_89670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NIES4071_89680 PF01008 Initiation factor 2 subunit family NIES4071_89720 PF17912 MalK OB fold domain NIES4071_89720 PF03459 TOBE domain NIES4071_89720 PF00005 ABC transporter NIES4071_89750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NIES4071_89780 PF00570 HRDC domain NIES4071_89780 PF01612 3'-5' exonuclease NIES4071_89790 PF00188 Cysteine-rich secretory protein family NIES4071_89810 PF04055 Radical SAM superfamily NIES4071_89810 PF06968 Biotin and Thiamin Synthesis associated domain NIES4071_89870 PF01061 ABC-2 type transporter NIES4071_89880 PF14524 Wzt C-terminal domain NIES4071_89880 PF00005 ABC transporter NIES4071_89900 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_89980 PF01938 TRAM domain NIES4071_89980 PF00919 Uncharacterized protein family UPF0004 NIES4071_89980 PF04055 Radical SAM superfamily NIES4071_90060 PF05685 Putative restriction endonuclease NIES4071_90070 PF06736 Protein of unknown function (DUF1211) NIES4071_90250 PF00925 GTP cyclohydrolase II NIES4071_90430 PF00664 ABC transporter transmembrane region NIES4071_90430 PF03412 Peptidase C39 family NIES4071_90430 PF00005 ABC transporter NIES4071_90470 PF00535 Glycosyl transferase family 2 NIES4071_90500 PF13439 Glycosyltransferase Family 4 NIES4071_90500 PF00534 Glycosyl transferases group 1 NIES4071_90560 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_90560 PF18719 ArlS sensor domain NIES4071_90560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_90610 PF00999 Sodium/hydrogen exchanger family NIES4071_90630 PF00486 Transcriptional regulatory protein, C terminal NIES4071_90630 PF00072 Response regulator receiver domain NIES4071_90670 PF00931 NB-ARC domain NIES4071_90670 PF00400 WD domain, G-beta repeat NIES4071_90710 PF01510 N-acetylmuramoyl-L-alanine amidase NIES4071_90710 PF01471 Putative peptidoglycan binding domain NIES4071_90760 PF00005 ABC transporter NIES4071_90770 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_90790 PF01022 Bacterial regulatory protein, arsR family NIES4071_90800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NIES4071_90800 PF00326 Prolyl oligopeptidase family NIES4071_90900 PF12849 PBP superfamily domain NIES4071_90910 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_90920 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_90960 PF00245 Alkaline phosphatase NIES4071_90980 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_90990 PF03009 Glycerophosphoryl diester phosphodiesterase family NIES4071_91040 PF00561 alpha/beta hydrolase fold NIES4071_91070 PF00005 ABC transporter NIES4071_91080 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES4071_91090 PF00072 Response regulator receiver domain NIES4071_91090 PF00196 Bacterial regulatory proteins, luxR family NIES4071_91100 PF00158 Sigma-54 interaction domain NIES4071_91100 PF00072 Response regulator receiver domain NIES4071_91100 PF02954 Bacterial regulatory protein, Fis family NIES4071_91130 PF08331 Domain of unknown function (DUF1730) NIES4071_91140 PF13419 Haloacid dehalogenase-like hydrolase NIES4071_91160 PF09150 Orange carotenoid protein, N-terminal NIES4071_91170 PF00005 ABC transporter NIES4071_91180 PF00005 ABC transporter NIES4071_91180 PF12704 MacB-like periplasmic core domain NIES4071_91180 PF02687 FtsX-like permease family NIES4071_91190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES4071_91230 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_91300 PF00145 C-5 cytosine-specific DNA methylase NIES4071_91330 PF00145 C-5 cytosine-specific DNA methylase NIES4071_91360 PF01507 Phosphoadenosine phosphosulfate reductase family NIES4071_91450 PF01979 Amidohydrolase family NIES4071_91460 PF10502 Signal peptidase, peptidase S26 NIES4071_91470 PF08719 Domain of unknown function (DUF1768) NIES4071_91490 PF00561 alpha/beta hydrolase fold NIES4071_91510 PF00475 Imidazoleglycerol-phosphate dehydratase NIES4071_91540 PF11283 Protein of unknown function (DUF3084) NIES4071_91580 PF00013 KH domain NIES4071_91580 PF01138 3' exoribonuclease family, domain 1 NIES4071_91580 PF03725 3' exoribonuclease family, domain 2 NIES4071_91580 PF00575 S1 RNA binding domain NIES4071_91580 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NIES4071_91590 PF00271 Helicase conserved C-terminal domain NIES4071_91590 PF00176 SNF2 family N-terminal domain NIES4071_91590 PF12419 SNF2 Helicase protein NIES4071_91590 PF00271 Helicase conserved C-terminal domain NIES4071_91590 PF12419 SNF2 Helicase protein NIES4071_91590 PF00176 SNF2 family N-terminal domain NIES4071_91610 PF04434 SWIM zinc finger NIES4071_91630 PF00202 Aminotransferase class-III NIES4071_91650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NIES4071_91650 PF01502 Phosphoribosyl-AMP cyclohydrolase NIES4071_91660 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NIES4071_91660 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NIES4071_91680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES4071_91680 PF01348 Type II intron maturase NIES4071_91780 PF01522 Polysaccharide deacetylase NIES4071_91790 PF00689 Cation transporting ATPase, C-terminus NIES4071_91790 PF00690 Cation transporter/ATPase, N-terminus NIES4071_91800 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system NIES4071_91810 PF01381 Helix-turn-helix NIES4071_91900 PF00534 Glycosyl transferases group 1 NIES4071_91900 PF13439 Glycosyltransferase Family 4 NIES4071_91940 PF00535 Glycosyl transferase family 2 NIES4071_91960 PF00005 ABC transporter NIES4071_91960 PF00664 ABC transporter transmembrane region NIES4071_91970 PF02397 Bacterial sugar transferase NIES4071_91980 PF13614 AAA domain NIES4071_91990 PF00534 Glycosyl transferases group 1 NIES4071_91990 PF13439 Glycosyltransferase Family 4 NIES4071_92020 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NIES4071_92040 PF00535 Glycosyl transferase family 2 NIES4071_92040 PF02709 N-terminal domain of galactosyltransferase NIES4071_92050 PF08421 Putative zinc binding domain NIES4071_92050 PF08484 C-methyltransferase C-terminal domain NIES4071_92060 PF16363 GDP-mannose 4,6 dehydratase NIES4071_92070 PF01266 FAD dependent oxidoreductase NIES4071_92080 PF00483 Nucleotidyl transferase NIES4071_92110 PF00092 von Willebrand factor type A domain NIES4071_92120 PF14332 Domain of unknown function (DUF4388) NIES4071_92120 PF00072 Response regulator receiver domain NIES4071_92130 PF00072 Response regulator receiver domain NIES4071_92200 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_92200 PF00101 Ribulose bisphosphate carboxylase, small chain NIES4071_92390 PF02469 Fasciclin domain NIES4071_92400 PF01894 Uncharacterised protein family UPF0047 NIES4071_92420 PF13460 NAD(P)H-binding NIES4071_92430 PF10396 GTP-binding protein TrmE N-terminus NIES4071_92430 PF12631 MnmE helical domain NIES4071_92430 PF01926 50S ribosome-binding GTPase NIES4071_92480 PF00936 BMC domain NIES4071_92520 PF02233 NAD(P) transhydrogenase beta subunit NIES4071_92530 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NIES4071_92540 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NIES4071_92540 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NIES4071_92580 PF02096 60Kd inner membrane protein NIES4071_92620 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_92620 PF17862 AAA+ lid domain NIES4071_92620 PF01434 Peptidase family M41 NIES4071_92670 PF00072 Response regulator receiver domain NIES4071_92670 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_92690 PF16657 Maltogenic Amylase, C-terminal domain NIES4071_92690 PF00128 Alpha amylase, catalytic domain NIES4071_92690 PF02903 Alpha amylase, N-terminal ig-like domain NIES4071_92720 PF01791 DeoC/LacD family aldolase NIES4071_92740 PF12323 Helix-turn-helix domain NIES4071_92740 PF01385 Probable transposase NIES4071_92740 PF07282 Putative transposase DNA-binding domain NIES4071_92770 PF00144 Beta-lactamase NIES4071_92790 PF01266 FAD dependent oxidoreductase NIES4071_92840 PF00850 Histone deacetylase domain NIES4071_92850 PF00850 Histone deacetylase domain NIES4071_92880 PF01926 50S ribosome-binding GTPase NIES4071_92900 PF00211 Adenylate and Guanylate cyclase catalytic domain NIES4071_92910 PF00171 Aldehyde dehydrogenase family NIES4071_92920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES4071_92920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES4071_92920 PF00205 Thiamine pyrophosphate enzyme, central domain NIES4071_92960 PF00005 ABC transporter NIES4071_92960 PF14524 Wzt C-terminal domain NIES4071_92990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIES4071_93040 PF01027 Inhibitor of apoptosis-promoting Bax1 NIES4071_93070 PF00694 Aconitase C-terminal domain NIES4071_93080 PF00330 Aconitase family (aconitate hydratase) NIES4071_93090 PF17284 Spermidine synthase tetramerisation domain NIES4071_93120 PF00999 Sodium/hydrogen exchanger family NIES4071_93120 PF00582 Universal stress protein family NIES4071_93180 PF00491 Arginase family NIES4071_93210 PF10509 Galactokinase galactose-binding signature NIES4071_93210 PF08544 GHMP kinases C terminal NIES4071_93210 PF00288 GHMP kinases N terminal domain NIES4071_93220 PF00483 Nucleotidyl transferase NIES4071_93230 PF17676 LD-carboxypeptidase C-terminal domain NIES4071_93230 PF02016 LD-carboxypeptidase N-terminal domain NIES4071_93250 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_93250 PF00072 Response regulator receiver domain NIES4071_93250 PF09308 LuxQ, periplasmic NIES4071_93250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_93270 PF01208 Uroporphyrinogen decarboxylase (URO-D) NIES4071_93290 PF13282 Domain of unknown function (DUF4070) NIES4071_93290 PF02310 B12 binding domain NIES4071_93290 PF04055 Radical SAM superfamily NIES4071_93310 PF00535 Glycosyl transferase family 2 NIES4071_93360 PF02618 YceG-like family NIES4071_93390 PF00696 Amino acid kinase family NIES4071_93390 PF01472 PUA domain NIES4071_93420 PF09210 Domain of unknown function (DUF1957) NIES4071_93420 PF03065 Glycosyl hydrolase family 57 NIES4071_93450 PF01765 Ribosome recycling factor NIES4071_93460 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_93480 PF13085 2Fe-2S iron-sulfur cluster binding domain NIES4071_93510 PF07444 Ycf66 protein N-terminus NIES4071_93530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIES4071_93530 PF00289 Biotin carboxylase, N-terminal domain NIES4071_93530 PF02785 Biotin carboxylase C-terminal domain NIES4071_93570 PF01578 Cytochrome C assembly protein NIES4071_93590 PF09179 TilS substrate binding domain NIES4071_93590 PF01171 PP-loop family NIES4071_93600 PF00171 Aldehyde dehydrogenase family NIES4071_93620 PF01339 CheB methylesterase NIES4071_93630 PF01739 CheR methyltransferase, SAM binding domain NIES4071_93630 PF03705 CheR methyltransferase, all-alpha domain NIES4071_93640 PF09308 LuxQ, periplasmic NIES4071_93640 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_93640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_93640 PF00072 Response regulator receiver domain NIES4071_93670 PF02308 MgtC family NIES4071_93680 PF05193 Peptidase M16 inactive domain NIES4071_93790 PF01555 DNA methylase NIES4071_93820 PF06838 Methionine gamma-lyase NIES4071_93840 PF00487 Fatty acid desaturase NIES4071_93850 PF00487 Fatty acid desaturase NIES4071_93860 PF00487 Fatty acid desaturase NIES4071_93880 PF00171 Aldehyde dehydrogenase family NIES4071_93900 PF01739 CheR methyltransferase, SAM binding domain NIES4071_93900 PF03705 CheR methyltransferase, all-alpha domain NIES4071_93910 PF00072 Response regulator receiver domain NIES4071_93910 PF01339 CheB methylesterase NIES4071_93920 PF00672 HAMP domain NIES4071_93920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_93920 PF02743 Cache domain NIES4071_93930 PF01584 CheW-like domain NIES4071_93940 PF07194 P2 response regulator binding domain NIES4071_93940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_93940 PF01584 CheW-like domain NIES4071_93940 PF01627 Hpt domain NIES4071_93940 PF02895 Signal transducing histidine kinase, homodimeric domain NIES4071_93950 PF00486 Transcriptional regulatory protein, C terminal NIES4071_93950 PF00072 Response regulator receiver domain NIES4071_93970 PF00072 Response regulator receiver domain NIES4071_93970 PF01627 Hpt domain NIES4071_93970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES4071_93970 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_93970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_93970 PF00672 HAMP domain NIES4071_93990 PF00672 HAMP domain NIES4071_93990 PF00989 PAS fold NIES4071_93990 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_93990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_94000 PF02844 Phosphoribosylglycinamide synthetase, N domain NIES4071_94000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NIES4071_94000 PF02843 Phosphoribosylglycinamide synthetase, C domain NIES4071_94010 PF01370 NAD dependent epimerase/dehydratase family NIES4071_94070 PF02535 ZIP Zinc transporter NIES4071_94080 PF01894 Uncharacterised protein family UPF0047 NIES4071_94160 PF00072 Response regulator receiver domain NIES4071_94160 PF09308 LuxQ, periplasmic NIES4071_94160 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_94160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_94180 PF00069 Protein kinase domain NIES4071_94180 PF03793 PASTA domain NIES4071_94190 PF00069 Protein kinase domain NIES4071_94190 PF03793 PASTA domain NIES4071_94230 PF00196 Bacterial regulatory proteins, luxR family NIES4071_94230 PF00072 Response regulator receiver domain NIES4071_94240 PF00294 pfkB family carbohydrate kinase NIES4071_94290 PF01202 Shikimate kinase NIES4071_94360 PF00005 ABC transporter NIES4071_94390 PF00355 Rieske [2Fe-2S] domain NIES4071_94400 PF10017 Histidine-specific methyltransferase, SAM-dependent NIES4071_94410 PF00069 Protein kinase domain NIES4071_94410 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_94420 PF13230 Glutamine amidotransferases class-II NIES4071_94490 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NIES4071_94570 PF02514 CobN/Magnesium Chelatase NIES4071_94570 PF11965 Domain of unknown function (DUF3479) NIES4071_94600 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NIES4071_94670 PF17862 AAA+ lid domain NIES4071_94670 PF01434 Peptidase family M41 NIES4071_94670 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_94680 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NIES4071_94680 PF00535 Glycosyl transferase family 2 NIES4071_94690 PF00293 NUDIX domain NIES4071_94710 PF00582 Universal stress protein family NIES4071_94720 PF00072 Response regulator receiver domain NIES4071_94720 PF14332 Domain of unknown function (DUF4388) NIES4071_94750 PF04055 Radical SAM superfamily NIES4071_95000 PF06969 HemN C-terminal domain NIES4071_95000 PF04055 Radical SAM superfamily NIES4071_95150 PF00501 AMP-binding enzyme NIES4071_95160 PF11954 Domain of unknown function (DUF3471) NIES4071_95160 PF00144 Beta-lactamase NIES4071_95250 PF00106 short chain dehydrogenase NIES4071_95270 PF04101 Glycosyltransferase family 28 C-terminal domain NIES4071_95270 PF03033 Glycosyltransferase family 28 N-terminal domain NIES4071_95300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES4071_95330 PF00072 Response regulator receiver domain NIES4071_95330 PF00486 Transcriptional regulatory protein, C terminal NIES4071_95350 PF07690 Major Facilitator Superfamily NIES4071_95360 PF00395 S-layer homology domain NIES4071_95360 PF04966 Carbohydrate-selective porin, OprB family NIES4071_95410 PF00107 Zinc-binding dehydrogenase NIES4071_95410 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_95470 PF00521 DNA gyrase/topoisomerase IV, subunit A NIES4071_95470 PF03989 DNA gyrase C-terminal domain, beta-propeller NIES4071_95490 PF04545 Sigma-70, region 4 NIES4071_95490 PF00140 Sigma-70 factor, region 1.2 NIES4071_95490 PF04539 Sigma-70 region 3 NIES4071_95490 PF04542 Sigma-70 region 2 NIES4071_95510 PF17746 SfsA N-terminal OB domain NIES4071_95510 PF03749 Sugar fermentation stimulation protein RE domain NIES4071_95570 PF02638 Glycosyl hydrolase-like 10 NIES4071_95600 PF00145 C-5 cytosine-specific DNA methylase NIES4071_95610 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NIES4071_95610 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NIES4071_95630 PF00300 Histidine phosphatase superfamily (branch 1) NIES4071_95670 PF02469 Fasciclin domain NIES4071_95700 PF00163 Ribosomal protein S4/S9 N-terminal domain NIES4071_95700 PF01479 S4 domain NIES4071_95710 PF06463 Molybdenum Cofactor Synthesis C NIES4071_95710 PF04055 Radical SAM superfamily NIES4071_95790 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_95800 PF11266 Long-chain fatty aldehyde decarbonylase NIES4071_95810 PF01488 Shikimate / quinate 5-dehydrogenase NIES4071_95820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NIES4071_95830 PF00106 short chain dehydrogenase NIES4071_95840 PF01227 GTP cyclohydrolase I NIES4071_95850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NIES4071_95860 PF01241 Photosystem I psaG / psaK NIES4071_95870 PF01241 Photosystem I psaG / psaK NIES4071_95880 PF00571 CBS domain NIES4071_95880 PF02163 Peptidase family M50 NIES4071_95900 PF00535 Glycosyl transferase family 2 NIES4071_95910 PF03099 Biotin/lipoate A/B protein ligase family NIES4071_95930 PF00067 Cytochrome P450 NIES4071_95940 PF01078 Magnesium chelatase, subunit ChlI NIES4071_95940 PF13335 Magnesium chelatase, subunit ChlI C-terminal NIES4071_95950 PF01230 HIT domain NIES4071_95960 PF00124 Photosynthetic reaction centre protein NIES4071_95990 PF02132 RecR protein NIES4071_95990 PF00633 Helix-hairpin-helix motif NIES4071_95990 PF13662 Toprim domain NIES4071_96000 PF01047 MarR family NIES4071_96040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIES4071_96060 PF00117 Glutamine amidotransferase class-I NIES4071_96070 PF01470 Pyroglutamyl peptidase NIES4071_96130 PF00293 NUDIX domain NIES4071_96130 PF09297 NADH pyrophosphatase zinc ribbon domain NIES4071_96160 PF10706 Aminoglycoside-2''-adenylyltransferase NIES4071_96200 PF00750 tRNA synthetases class I (R) NIES4071_96200 PF03485 Arginyl tRNA synthetase N terminal domain NIES4071_96200 PF05746 DALR anticodon binding domain NIES4071_96240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NIES4071_96240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NIES4071_96260 PF00005 ABC transporter NIES4071_96260 PF00664 ABC transporter transmembrane region NIES4071_96260 PF03412 Peptidase C39 family NIES4071_96270 PF00230 Major intrinsic protein NIES4071_96280 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIES4071_96280 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NIES4071_96320 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES4071_96320 PF14759 Reductase C-terminal NIES4071_96380 PF00664 ABC transporter transmembrane region NIES4071_96380 PF00005 ABC transporter NIES4071_96380 PF03412 Peptidase C39 family NIES4071_96430 PF01209 ubiE/COQ5 methyltransferase family NIES4071_96490 PF17863 AAA lid domain NIES4071_96490 PF07726 ATPase family associated with various cellular activities (AAA) NIES4071_96580 PF08241 Methyltransferase domain NIES4071_96630 PF00440 Bacterial regulatory proteins, tetR family NIES4071_96660 PF12323 Helix-turn-helix domain NIES4071_96660 PF07282 Putative transposase DNA-binding domain NIES4071_96660 PF01385 Probable transposase NIES4071_96670 PF01593 Flavin containing amine oxidoreductase NIES4071_96710 PF12833 Helix-turn-helix domain NIES4071_96740 PF08240 Alcohol dehydrogenase GroES-like domain NIES4071_96740 PF00107 Zinc-binding dehydrogenase NIES4071_96750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_96750 PF03466 LysR substrate binding domain NIES4071_96780 PF01678 Diaminopimelate epimerase NIES4071_96800 PF00440 Bacterial regulatory proteins, tetR family NIES4071_96810 PF00067 Cytochrome P450 NIES4071_96850 PF12833 Helix-turn-helix domain NIES4071_96920 PF03079 ARD/ARD' family NIES4071_96930 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_96960 PF13614 AAA domain NIES4071_96980 PF05973 Phage derived protein Gp49-like (DUF891) NIES4071_97000 PF01580 FtsK/SpoIIIE family NIES4071_97000 PF17854 FtsK alpha domain NIES4071_97000 PF09397 Ftsk gamma domain NIES4071_97030 PF02463 RecF/RecN/SMC N terminal domain NIES4071_97060 PF01501 Glycosyl transferase family 8 NIES4071_97070 PF01501 Glycosyl transferase family 8 NIES4071_97090 PF00535 Glycosyl transferase family 2 NIES4071_97100 PF00534 Glycosyl transferases group 1 NIES4071_97100 PF13439 Glycosyltransferase Family 4 NIES4071_97120 PF04966 Carbohydrate-selective porin, OprB family NIES4071_97120 PF00395 S-layer homology domain NIES4071_97160 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_97200 PF04794 YdjC-like protein NIES4071_97210 PF02310 B12 binding domain NIES4071_97210 PF04055 Radical SAM superfamily NIES4071_97220 PF00664 ABC transporter transmembrane region NIES4071_97220 PF00005 ABC transporter NIES4071_97280 PF16918 Protein kinase G tetratricopeptide repeat NIES4071_97280 PF16919 Protein kinase G rubredoxin domain NIES4071_97280 PF00069 Protein kinase domain NIES4071_97340 PF00072 Response regulator receiver domain NIES4071_97340 PF13188 PAS domain NIES4071_97340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_97340 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_97340 PF08448 PAS fold NIES4071_97360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_97360 PF00672 HAMP domain NIES4071_97360 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_97370 PF06745 KaiC NIES4071_97380 PF12729 Four helix bundle sensory module for signal transduction NIES4071_97380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_97380 PF00672 HAMP domain NIES4071_97400 PF09078 CheY binding NIES4071_97400 PF01584 CheW-like domain NIES4071_97400 PF02895 Signal transducing histidine kinase, homodimeric domain NIES4071_97400 PF01627 Hpt domain NIES4071_97400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_97410 PF01590 GAF domain NIES4071_97410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_97430 PF00072 Response regulator receiver domain NIES4071_97440 PF14332 Domain of unknown function (DUF4388) NIES4071_97440 PF00072 Response regulator receiver domain NIES4071_97460 PF01168 Alanine racemase, N-terminal domain NIES4071_97460 PF00842 Alanine racemase, C-terminal domain NIES4071_97490 PF08486 Stage II sporulation protein NIES4071_97540 PF13614 AAA domain NIES4071_97580 PF00301 Rubredoxin NIES4071_97620 PF00595 PDZ domain NIES4071_97620 PF03572 Peptidase family S41 NIES4071_97630 PF00027 Cyclic nucleotide-binding domain NIES4071_97630 PF13545 Crp-like helix-turn-helix domain NIES4071_97660 PF00936 BMC domain NIES4071_97670 PF00936 BMC domain NIES4071_97690 PF08386 TAP-like protein NIES4071_97690 PF00561 alpha/beta hydrolase fold NIES4071_97700 PF01063 Amino-transferase class IV NIES4071_97720 PF13614 AAA domain NIES4071_97730 PF00067 Cytochrome P450 NIES4071_97750 PF00005 ABC transporter NIES4071_97750 PF00664 ABC transporter transmembrane region NIES4071_97780 PF12848 ABC transporter NIES4071_97780 PF16326 ABC transporter C-terminal domain NIES4071_97780 PF00005 ABC transporter NIES4071_97810 PF00563 EAL domain NIES4071_97810 PF01590 GAF domain NIES4071_97810 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_97810 PF00360 Phytochrome region NIES4071_97820 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NIES4071_97820 PF00672 HAMP domain NIES4071_97820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_97820 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_97820 PF08448 PAS fold NIES4071_97850 PF01641 SelR domain NIES4071_97880 PF02082 Transcriptional regulator NIES4071_97890 PF13545 Crp-like helix-turn-helix domain NIES4071_97920 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_97930 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_97950 PF02656 Domain of unknown function (DUF202) NIES4071_97970 PF00291 Pyridoxal-phosphate dependent enzyme NIES4071_97980 PF01925 Sulfite exporter TauE/SafE NIES4071_98000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES4071_98000 PF03466 LysR substrate binding domain NIES4071_98110 PF00069 Protein kinase domain NIES4071_98170 PF07228 Stage II sporulation protein E (SpoIIE) NIES4071_98170 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NIES4071_98180 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NIES4071_98180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NIES4071_98200 PF13369 Transglutaminase-like superfamily NIES4071_98350 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_98350 PF00069 Protein kinase domain NIES4071_98370 PF00684 DnaJ central domain NIES4071_98370 PF00226 DnaJ domain NIES4071_98370 PF01556 DnaJ C terminal domain NIES4071_98380 PF07722 Peptidase C26 NIES4071_98390 PF00400 WD domain, G-beta repeat NIES4071_98390 PF00931 NB-ARC domain NIES4071_98450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_98450 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_98450 PF00072 Response regulator receiver domain NIES4071_98450 PF09308 LuxQ, periplasmic NIES4071_98470 PF00999 Sodium/hydrogen exchanger family NIES4071_98480 PF00005 ABC transporter NIES4071_98480 PF02687 FtsX-like permease family NIES4071_98480 PF12704 MacB-like periplasmic core domain NIES4071_98510 PF01501 Glycosyl transferase family 8 NIES4071_98510 PF00535 Glycosyl transferase family 2 NIES4071_98520 PF00535 Glycosyl transferase family 2 NIES4071_98550 PF00005 ABC transporter NIES4071_98550 PF00664 ABC transporter transmembrane region NIES4071_98570 PF00535 Glycosyl transferase family 2 NIES4071_98600 PF16363 GDP-mannose 4,6 dehydratase NIES4071_98610 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NIES4071_98620 PF08484 C-methyltransferase C-terminal domain NIES4071_98620 PF08421 Putative zinc binding domain NIES4071_98630 PF00483 Nucleotidyl transferase NIES4071_98690 PF07478 D-ala D-ala ligase C-terminus NIES4071_98690 PF01820 D-ala D-ala ligase N-terminus NIES4071_98700 PF03023 Lipid II flippase MurJ NIES4071_98720 PF02615 Malate/L-lactate dehydrogenase NIES4071_98730 PF04294 VanW like protein NIES4071_98740 PF01812 5-formyltetrahydrofolate cyclo-ligase family NIES4071_98750 PF00528 Binding-protein-dependent transport system inner membrane component NIES4071_98760 PF02397 Bacterial sugar transferase NIES4071_98790 PF13545 Crp-like helix-turn-helix domain NIES4071_98790 PF00027 Cyclic nucleotide-binding domain NIES4071_98840 PF08479 POTRA domain, ShlB-type NIES4071_98840 PF17287 POTRA domain NIES4071_98840 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NIES4071_98910 PF02469 Fasciclin domain NIES4071_98920 PF00326 Prolyl oligopeptidase family NIES4071_98930 PF02660 Glycerol-3-phosphate acyltransferase NIES4071_98960 PF02405 Permease MlaE NIES4071_98980 PF01343 Peptidase family S49 NIES4071_99030 PF02887 Pyruvate kinase, alpha/beta domain NIES4071_99030 PF00391 PEP-utilising enzyme, mobile domain NIES4071_99030 PF00224 Pyruvate kinase, barrel domain NIES4071_99040 PF01627 Hpt domain NIES4071_99040 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES4071_99040 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_99040 PF00989 PAS fold NIES4071_99040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_99040 PF00072 Response regulator receiver domain NIES4071_99050 PF01590 GAF domain NIES4071_99050 PF08446 PAS fold NIES4071_99050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_99050 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_99050 PF00360 Phytochrome region NIES4071_99060 PF00534 Glycosyl transferases group 1 NIES4071_99060 PF13439 Glycosyltransferase Family 4 NIES4071_99140 PF10431 C-terminal, D2-small domain, of ClpB protein NIES4071_99140 PF02861 Clp amino terminal domain, pathogenicity island component NIES4071_99140 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_99140 PF07724 AAA domain (Cdc48 subfamily) NIES4071_99140 PF17871 AAA lid domain NIES4071_99160 PF00069 Protein kinase domain NIES4071_99160 PF03781 Sulfatase-modifying factor enzyme 1 NIES4071_99230 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system NIES4071_99260 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NIES4071_99260 PF00400 WD domain, G-beta repeat NIES4071_99280 PF04485 Phycobilisome degradation protein nblA NIES4071_99300 PF09367 CpeS-like protein NIES4071_99320 PF00427 Phycobilisome Linker polypeptide NIES4071_99330 PF00427 Phycobilisome Linker polypeptide NIES4071_99380 PF07969 Amidohydrolase family NIES4071_99420 PF00498 FHA domain NIES4071_99420 PF12773 Double zinc ribbon NIES4071_99430 PF05685 Putative restriction endonuclease NIES4071_99440 PF08241 Methyltransferase domain NIES4071_99480 PF03796 DnaB-like helicase C terminal domain NIES4071_99480 PF03796 DnaB-like helicase C terminal domain NIES4071_99480 PF00772 DnaB-like helicase N terminal domain NIES4071_99480 PF14528 LAGLIDADG-like domain NIES4071_99480 PF00772 DnaB-like helicase N terminal domain NIES4071_99480 PF14528 LAGLIDADG-like domain NIES4071_99500 PF00589 Phage integrase family NIES4071_99510 PF00589 Phage integrase family NIES4071_99510 PF02899 Phage integrase, N-terminal SAM-like domain NIES4071_99540 PF03442 Carbohydrate binding domain X2 NIES4071_99540 PF00942 Cellulose binding domain NIES4071_99570 PF00072 Response regulator receiver domain NIES4071_99570 PF00486 Transcriptional regulatory protein, C terminal NIES4071_99570 PF01627 Hpt domain NIES4071_99580 PF13426 PAS domain NIES4071_99580 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_99580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_99580 PF00672 HAMP domain NIES4071_99590 PF00072 Response regulator receiver domain NIES4071_99590 PF00486 Transcriptional regulatory protein, C terminal NIES4071_99630 PF03358 NADPH-dependent FMN reductase NIES4071_99650 PF00072 Response regulator receiver domain NIES4071_99650 PF13188 PAS domain NIES4071_99650 PF08448 PAS fold NIES4071_99650 PF00512 His Kinase A (phospho-acceptor) domain NIES4071_99650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES4071_99660 PF00072 Response regulator receiver domain NIES4071_99670 PF01590 GAF domain NIES4071_99670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES4071_99680 PF00004 ATPase family associated with various cellular activities (AAA) NIES4071_99720 PF00732 GMC oxidoreductase NIES4071_99720 PF05199 GMC oxidoreductase NIES4071_99750 PF00501 AMP-binding enzyme NIES4071_99760 PF00815 Histidinol dehydrogenase NIES4071_99840 PF00436 Single-strand binding protein family NIES4071_99850 PF00005 ABC transporter NIES4071_99850 PF17912 MalK OB fold domain NIES4071_99850 PF03459 TOBE domain NIES4071_99860 PF13409 Glutathione S-transferase, N-terminal domain NIES4071_99930 PF03853 YjeF-related protein N-terminus NIES4071_99930 PF01256 Carbohydrate kinase NIES4071_99940 PF00563 EAL domain NIES4071_99940 PF01590 GAF domain NIES4071_99940 PF00990 Diguanylate cyclase, GGDEF domain NIES4071_99940 PF00360 Phytochrome region NIES4071_99960 PF00106 short chain dehydrogenase NIES4071_99980 PF13302 Acetyltransferase (GNAT) domain