locus-tag class description IM45_001 PF06039 Malate:quinone oxidoreductase (Mqo) IM45_003 PF14437 MafB19-like deaminase IM45_005 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IM45_005 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IM45_005 PF02769 AIR synthase related protein, C-terminal domain IM45_007 PF00464 Serine hydroxymethyltransferase IM45_009 PF00459 Inositol monophosphatase family IM45_011 PF00266 Aminotransferase class-V IM45_013 PF00334 Nucleoside diphosphate kinase IM45_015 PF04551 GcpE protein IM45_017 PF13393 Histidyl-tRNA synthetase IM45_017 PF03129 Anticodon binding domain IM45_019 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IM45_019 PF01926 50S ribosome-binding GTPase IM45_021 PF00342 Phosphoglucose isomerase IM45_023 PF04023 FeoA domain IM45_025 PF07664 Ferrous iron transport protein B C terminus IM45_025 PF07670 Nucleoside recognition IM45_025 PF02421 Ferrous iron transport protein B IM45_025 PF17910 FeoB cytosolic helical domain IM45_029 PF01293 Phosphoenolpyruvate carboxykinase IM45_031 PF00293 NUDIX domain IM45_033 PF00438 S-adenosylmethionine synthetase, N-terminal domain IM45_033 PF02772 S-adenosylmethionine synthetase, central domain IM45_033 PF02773 S-adenosylmethionine synthetase, C-terminal domain IM45_035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IM45_035 PF03466 LysR substrate binding domain IM45_037 PF08267 Cobalamin-independent synthase, N-terminal domain IM45_037 PF01717 Cobalamin-independent synthase, Catalytic domain IM45_039 PF02646 RmuC family IM45_041 PF01209 ubiE/COQ5 methyltransferase family IM45_043 PF02036 SCP-2 sterol transfer family IM45_045 PF03109 ABC1 family IM45_047 PF04204 Homoserine O-succinyltransferase IM45_049 PF01040 UbiA prenyltransferase family IM45_051 PF01553 Acyltransferase IM45_053 PF00579 tRNA synthetases class I (W and Y) IM45_055 PF00834 Ribulose-phosphate 3 epimerase family IM45_057 PF01761 3-dehydroquinate synthase IM45_059 PF01202 Shikimate kinase IM45_061 PF13091 PLD-like domain IM45_063 PF09335 SNARE associated Golgi protein IM45_067 PF13580 SIS domain IM45_068 PF04972 BON domain IM45_071 PF01722 BolA-like protein IM45_073 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IM45_075 PF13180 PDZ domain IM45_075 PF00595 PDZ domain IM45_077 PF06295 Protein of unknown function (DUF1043) IM45_079 PF00572 Ribosomal protein L13 IM45_081 PF00380 Ribosomal protein S9/S16 IM45_085 PF06835 Lipopolysaccharide-assembly, LptC-related IM45_086 PF03968 OstA-like protein IM45_089 PF12399 Branched-chain amino acid ATP-binding cassette transporter IM45_089 PF00005 ABC transporter IM45_093 PF03668 P-loop ATPase protein family IM45_095 PF02142 MGS-like domain IM45_095 PF01808 AICARFT/IMPCHase bienzyme IM45_097 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IM45_097 PF02843 Phosphoribosylglycinamide synthetase, C domain IM45_097 PF02844 Phosphoribosylglycinamide synthetase, N domain IM45_099 PF00216 Bacterial DNA-binding protein IM45_1000 PF03609 PTS system sorbose-specific iic component IM45_1002 PF03610 PTS system fructose IIA component IM45_1002 PF03830 PTS system sorbose subfamily IIB component IM45_1004 PF03741 Integral membrane protein TerC family IM45_1004 PF03471 Transporter associated domain IM45_1006 PF00425 chorismate binding enzyme IM45_1006 PF04715 Anthranilate synthase component I, N terminal region IM45_101 PF01964 Radical SAM ThiC family IM45_101 PF13667 ThiC-associated domain IM45_1011 PF00749 tRNA synthetases class I (E and Q), catalytic domain IM45_1015 PF07690 Major Facilitator Superfamily IM45_1017 PF00529 HlyD membrane-fusion protein of T1SS IM45_1017 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IM45_1019 PF02657 Fe-S metabolism associated domain IM45_1021 PF01458 Uncharacterized protein family (UPF0051) IM45_1022 PF00005 ABC transporter IM45_1025 PF00266 Aminotransferase class-V IM45_1027 PF01521 Iron-sulphur cluster biosynthesis IM45_1029 PF01458 Uncharacterized protein family (UPF0051) IM45_103 PF02581 Thiamine monophosphate synthase IM45_1031 PF00216 Bacterial DNA-binding protein IM45_1033 PF03483 B3/4 domain IM45_1033 PF03147 Ferredoxin-fold anticodon binding domain IM45_1033 PF03484 tRNA synthetase B5 domain IM45_1033 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IM45_1033 PF01588 Putative tRNA binding domain IM45_1035 PF01409 tRNA synthetases class II core domain (F) IM45_1035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IM45_1037 PF00453 Ribosomal protein L20 IM45_1039 PF01632 Ribosomal protein L35 IM45_104 PF00899 ThiF family IM45_1041 PF05198 Translation initiation factor IF-3, N-terminal domain IM45_1041 PF00707 Translation initiation factor IF-3, C-terminal domain IM45_1043 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IM45_1043 PF03129 Anticodon binding domain IM45_1043 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IM45_1045 PF00929 Exonuclease IM45_1047 PF00075 RNase H IM45_1049 PF08241 Methyltransferase domain IM45_1051 PF00753 Metallo-beta-lactamase superfamily IM45_1051 PF16123 Hydroxyacylglutathione hydrolase C-terminus IM45_1053 PF03372 Endonuclease/Exonuclease/phosphatase family IM45_1055 PF01464 Transglycosylase SLT domain IM45_1055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IM45_1057 PF04362 Bacterial Fe(2+) trafficking IM45_1059 PF04055 Radical SAM superfamily IM45_1059 PF06969 HemN C-terminal domain IM45_1061 PF02325 YGGT family IM45_1063 PF03652 Holliday junction resolvase IM45_1064 PF02622 Uncharacterized ACR, COG1678 IM45_1067 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IM45_1067 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IM45_1069 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IM45_1069 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IM45_107 PF02597 ThiS family IM45_1071 PF01106 NifU-like domain IM45_1071 PF01521 Iron-sulphur cluster biosynthesis IM45_1073 PF00561 alpha/beta hydrolase fold IM45_1077 PF01475 Ferric uptake regulator family IM45_1079 PF02635 DsrE/DsrF-like family IM45_1081 PF02635 DsrE/DsrF-like family IM45_1083 PF04077 DsrH like protein IM45_1085 PF00164 Ribosomal protein S12/S23 IM45_1087 PF00177 Ribosomal protein S7p/S5e IM45_1089 PF14492 Elongation Factor G, domain II IM45_1089 PF03144 Elongation factor Tu domain 2 IM45_1089 PF00679 Elongation factor G C-terminus IM45_1089 PF00009 Elongation factor Tu GTP binding domain IM45_1089 PF03764 Elongation factor G, domain IV IM45_109 PF05690 Thiazole biosynthesis protein ThiG IM45_1091 PF03143 Elongation factor Tu C-terminal domain IM45_1091 PF03144 Elongation factor Tu domain 2 IM45_1091 PF00009 Elongation factor Tu GTP binding domain IM45_1093 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IM45_1094 PF00467 KOW motif IM45_1094 PF02357 Transcription termination factor nusG IM45_1097 PF03946 Ribosomal protein L11, N-terminal domain IM45_1097 PF00298 Ribosomal protein L11, RNA binding domain IM45_1099 PF00687 Ribosomal protein L1p/L10e family IM45_110 PF06968 Biotin and Thiamin Synthesis associated domain IM45_110 PF04055 Radical SAM superfamily IM45_1101 PF00466 Ribosomal protein L10 IM45_1103 PF00542 Ribosomal protein L7/L12 C-terminal domain IM45_1103 PF16320 Ribosomal protein L7/L12 dimerisation domain IM45_1105 PF00562 RNA polymerase Rpb2, domain 6 IM45_1105 PF10385 RNA polymerase beta subunit external 1 domain IM45_1105 PF04563 RNA polymerase beta subunit IM45_1105 PF04561 RNA polymerase Rpb2, domain 2 IM45_1105 PF04565 RNA polymerase Rpb2, domain 3 IM45_1105 PF04560 RNA polymerase Rpb2, domain 7 IM45_1107 PF00623 RNA polymerase Rpb1, domain 2 IM45_1107 PF04983 RNA polymerase Rpb1, domain 3 IM45_1107 PF05000 RNA polymerase Rpb1, domain 4 IM45_1107 PF04998 RNA polymerase Rpb1, domain 5 IM45_1107 PF04997 RNA polymerase Rpb1, domain 1 IM45_1109 PF01565 FAD binding domain IM45_1109 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IM45_1110 PF02237 Biotin protein ligase C terminal domain IM45_1110 PF03099 Biotin/lipoate A/B protein ligase family IM45_1110 PF08279 HTH domain IM45_1117 PF07992 Pyridine nucleotide-disulphide oxidoreductase IM45_1117 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IM45_1119 PF02817 e3 binding domain IM45_1119 PF00364 Biotin-requiring enzyme IM45_1119 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IM45_1121 PF17831 Pyruvate dehydrogenase E1 component middle domain IM45_1121 PF00456 Transketolase, thiamine diphosphate binding domain IM45_1123 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IM45_1123 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IM45_1125 PF01121 Dephospho-CoA kinase IM45_1127 PF02810 SEC-C motif IM45_1127 PF07517 SecA DEAD-like domain IM45_1127 PF01043 SecA preprotein cross-linking domain IM45_1127 PF07516 SecA Wing and Scaffold domain IM45_113 PF04093 rod shape-determining protein MreD IM45_1131 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IM45_1133 PF12327 FtsZ family, C-terminal domain IM45_1133 PF00091 Tubulin/FtsZ family, GTPase domain IM45_1135 PF02491 SHS2 domain inserted in FTSA IM45_1137 PF08478 POTRA domain, FtsQ-type IM45_1137 PF03799 Cell division protein FtsQ IM45_1139 PF02875 Mur ligase family, glutamate ligase domain IM45_1139 PF08245 Mur ligase middle domain IM45_1139 PF01225 Mur ligase family, catalytic domain IM45_1141 PF03033 Glycosyltransferase family 28 N-terminal domain IM45_1141 PF04101 Glycosyltransferase family 28 C-terminal domain IM45_1142 PF01098 Cell cycle protein IM45_1143 PF02875 Mur ligase family, glutamate ligase domain IM45_1143 PF08245 Mur ligase middle domain IM45_1147 PF00953 Glycosyl transferase family 4 IM45_1147 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IM45_1148 PF08245 Mur ligase middle domain IM45_1148 PF02875 Mur ligase family, glutamate ligase domain IM45_1148 PF01225 Mur ligase family, catalytic domain IM45_1149 PF02875 Mur ligase family, glutamate ligase domain IM45_1149 PF01225 Mur ligase family, catalytic domain IM45_1149 PF08245 Mur ligase middle domain IM45_115 PF04085 rod shape-determining protein MreC IM45_1153 PF00905 Penicillin binding protein transpeptidase domain IM45_1153 PF03717 Penicillin-binding Protein dimerisation domain IM45_1155 PF04999 Cell division protein FtsL IM45_1157 PF01795 MraW methylase family IM45_1159 PF14489 QueF-like protein IM45_1159 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IM45_1161 PF00557 Metallopeptidase family M24 IM45_1165 PF00318 Ribosomal protein S2 IM45_1167 PF00889 Elongation factor TS IM45_1169 PF00696 Amino acid kinase family IM45_1171 PF01765 Ribosome recycling factor IM45_1173 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IM45_1173 PF13288 DXP reductoisomerase C-terminal domain IM45_1173 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IM45_1175 PF01255 Putative undecaprenyl diphosphate synthase IM45_1179 PF17820 PDZ domain IM45_1179 PF02163 Peptidase family M50 IM45_1180 PF07244 Surface antigen variable number repeat IM45_1180 PF01103 Surface antigen IM45_1183 PF03938 Outer membrane protein (OmpH-like) IM45_1185 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IM45_1185 PF00132 Bacterial transferase hexapeptide (six repeats) IM45_1187 PF07977 FabA-like domain IM45_1189 PF00132 Bacterial transferase hexapeptide (six repeats) IM45_1189 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IM45_119 PF01220 Dehydroquinase class II IM45_1191 PF01336 OB-fold nucleic acid binding domain IM45_1191 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IM45_1191 PF14579 Helix-hairpin-helix motif IM45_1191 PF07733 Bacterial DNA polymerase III alpha NTPase domain IM45_1191 PF02811 PHP domain IM45_1193 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IM45_1195 PF01053 Cys/Met metabolism PLP-dependent enzyme IM45_1197 PF02976 DNA mismatch repair enzyme MutH IM45_1199 PF00293 NUDIX domain IM45_1201 PF01790 Prolipoprotein diacylglyceryl transferase IM45_1203 PF00303 Thymidylate synthase IM45_1205 PF17946 RecC C-terminal domain IM45_1207 PF13361 UvrD-like helicase C-terminal domain IM45_1207 PF00580 UvrD/REP helicase N-terminal domain IM45_1207 PF12705 PD-(D/E)XK nuclease superfamily IM45_1209 PF13538 UvrD-like helicase C-terminal domain IM45_121 PF00364 Biotin-requiring enzyme IM45_1211 PF00027 Cyclic nucleotide-binding domain IM45_1211 PF13545 Crp-like helix-turn-helix domain IM45_1213 PF00117 Glutamine amidotransferase class-I IM45_1215 PF03796 DnaB-like helicase C terminal domain IM45_1215 PF00772 DnaB-like helicase N terminal domain IM45_1217 PF00012 Hsp70 protein IM45_1219 PF00684 DnaJ central domain IM45_1219 PF01556 DnaJ C terminal domain IM45_1219 PF00226 DnaJ domain IM45_1221 PF01649 Ribosomal protein S20 IM45_1223 PF06574 FAD synthetase IM45_1223 PF01687 Riboflavin kinase IM45_1224 PF06827 Zinc finger found in FPG and IleRS IM45_1224 PF08264 Anticodon-binding domain of tRNA IM45_1224 PF00133 tRNA synthetases class I (I, L, M and V) IM45_1225 PF01252 Signal peptidase (SPase) II IM45_1229 PF02401 LytB protein IM45_123 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IM45_123 PF02785 Biotin carboxylase C-terminal domain IM45_123 PF00289 Biotin carboxylase, N-terminal domain IM45_1231 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IM45_1231 PF00117 Glutamine amidotransferase class-I IM45_1233 PF02142 MGS-like domain IM45_1233 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IM45_1233 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IM45_1235 PF00186 Dihydrofolate reductase IM45_1237 PF00149 Calcineurin-like phosphoesterase IM45_1239 PF04379 ApaG domain IM45_1241 PF00398 Ribosomal RNA adenine dimethylase IM45_1242 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IM45_1245 PF09312 SurA N-terminal domain IM45_1245 PF00639 PPIC-type PPIASE domain IM45_125 PF02954 Bacterial regulatory protein, Fis family IM45_1250 PF03658 RnfH family Ubiquitin IM45_1251 PF03364 Polyketide cyclase / dehydrase and lipid transport IM45_1254 PF01668 SmpB protein IM45_1257 PF00459 Inositol monophosphatase family IM45_1259 PF03948 Ribosomal protein L9, C-terminal domain IM45_1259 PF01281 Ribosomal protein L9, N-terminal domain IM45_1261 PF01084 Ribosomal protein S18 IM45_1263 PF00436 Single-strand binding protein family IM45_1265 PF01250 Ribosomal protein S6 IM45_1267 PF00588 SpoU rRNA Methylase family IM45_1267 PF08032 RNA 2'-O ribose methyltransferase substrate binding IM45_1269 PF00575 S1 RNA binding domain IM45_1269 PF00773 RNB domain IM45_1269 PF08206 Ribonuclease B OB domain IM45_1269 PF08461 Ribonuclease R winged-helix domain IM45_1269 PF17876 Cold shock domain IM45_127 PF01914 MarC family integral membrane protein IM45_1271 PF00709 Adenylosuccinate synthetase IM45_1273 PF01145 SPFH domain / Band 7 family IM45_1275 PF12221 Bacterial membrane protein N terminal IM45_1275 PF01145 SPFH domain / Band 7 family IM45_1277 PF17209 Hfq protein IM45_1281 PF01119 DNA mismatch repair protein, C-terminal domain IM45_1281 PF08676 MutL C terminal dimerisation domain IM45_1283 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IM45_1285 PF01520 N-acetylmuramoyl-L-alanine amidase IM45_1287 PF00929 Exonuclease IM45_1289 PF02666 Phosphatidylserine decarboxylase IM45_129 PF01432 Peptidase family M3 IM45_1291 PF00924 Mechanosensitive ion channel IM45_1291 PF12794 Mechanosensitive ion channel inner membrane domain 1 IM45_1291 PF12795 Mechanosensitive ion channel porin domain IM45_1293 PF01132 Elongation factor P (EF-P) OB domain IM45_1293 PF08207 Elongation factor P (EF-P) KOW-like domain IM45_1293 PF09285 Elongation factor P, C-terminal IM45_1295 PF00118 TCP-1/cpn60 chaperonin family IM45_1297 PF00166 Chaperonin 10 Kd subunit IM45_1299 PF10415 Fumarase C C-terminus IM45_1299 PF00206 Lyase IM45_1302 PF05321 Haemolysin expression modulating protein IM45_1304 PF00578 AhpC/TSA family IM45_1304 PF10417 C-terminal domain of 1-Cys peroxiredoxin IM45_1306 PF02547 Queuosine biosynthesis protein IM45_1308 PF01702 Queuine tRNA-ribosyltransferase IM45_131 PF01384 Phosphate transporter family IM45_1310 PF02699 Preprotein translocase subunit IM45_1312 PF07549 SecD/SecF GG Motif IM45_1312 PF13721 SecD export protein N-terminal TM region IM45_1312 PF02355 Protein export membrane protein IM45_1314 PF07549 SecD/SecF GG Motif IM45_1314 PF02355 Protein export membrane protein IM45_1316 PF03477 ATP cone domain IM45_1318 PF01872 RibD C-terminal domain IM45_1318 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IM45_1320 PF00885 6,7-dimethyl-8-ribityllumazine synthase IM45_1322 PF01029 NusB family IM45_1324 PF02769 AIR synthase related protein, C-terminal domain IM45_1324 PF00586 AIR synthase related protein, N-terminal domain IM45_1325 PF04608 Phosphatidylglycerophosphatase A IM45_1328 PF01103 Surface antigen IM45_1328 PF07244 Surface antigen variable number repeat IM45_1328 PF17243 POTRA domain TamA domain 1 IM45_1330 PF04357 TamB, inner membrane protein subunit of TAM complex IM45_1332 PF00719 Inorganic pyrophosphatase IM45_1335 PF03129 Anticodon binding domain IM45_1335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IM45_1335 PF04073 Aminoacyl-tRNA editing domain IM45_1338 PF01513 ATP-NAD kinase IM45_1340 PF01025 GrpE IM45_1342 PF03167 Uracil DNA glycosylase superfamily IM45_1344 PF00890 FAD binding domain IM45_1344 PF02910 Fumarate reductase flavoprotein C-term IM45_1347 PF04546 Sigma-70, non-essential region IM45_1347 PF04545 Sigma-70, region 4 IM45_1347 PF00140 Sigma-70 factor, region 1.2 IM45_1347 PF03979 Sigma-70 factor, region 1.1 IM45_1347 PF04542 Sigma-70 region 2 IM45_1347 PF04539 Sigma-70 region 3 IM45_1349 PF01807 CHC2 zinc finger IM45_1349 PF10410 DnaB-helicase binding domain of primase IM45_1349 PF08275 DNA primase catalytic core, N-terminal domain IM45_1349 PF08278 DNA primase DnaG DnaB-binding IM45_135 PF01206 Sulfurtransferase TusA IM45_1351 PF01165 Ribosomal protein S21 IM45_1353 PF00814 Glycoprotease family IM45_1355 PF02152 Dihydroneopterin aldolase IM45_1357 PF02673 Bacitracin resistance protein BacA IM45_1359 PF12627 Probable RNA and SrmB- binding site of polymerase A IM45_1359 PF01743 Poly A polymerase head domain IM45_1359 PF01966 HD domain IM45_1361 PF04380 Membrane fusogenic activity IM45_1363 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IM45_1365 PF00149 Calcineurin-like phosphoesterase IM45_1367 PF01553 Acyltransferase IM45_1369 PF18073 Rubredoxin metal binding domain IM45_137 PF00448 SRP54-type protein, GTPase domain IM45_137 PF02881 SRP54-type protein, helical bundle domain IM45_1371 PF03603 DNA polymerase III psi subunit IM45_1373 PF12343 Cold shock protein DEAD box A IM45_1373 PF00271 Helicase conserved C-terminal domain IM45_1373 PF00270 DEAD/DEAH box helicase IM45_1373 PF03880 DbpA RNA binding domain IM45_1375 PF00013 KH domain IM45_1375 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IM45_1375 PF00575 S1 RNA binding domain IM45_1375 PF03725 3' exoribonuclease family, domain 2 IM45_1375 PF01138 3' exoribonuclease family, domain 1 IM45_1377 PF00312 Ribosomal protein S15 IM45_1379 PF09157 Pseudouridine synthase II TruB, C-terminal IM45_1379 PF16198 tRNA pseudouridylate synthase B C-terminal domain IM45_1379 PF01509 TruB family pseudouridylate synthase (N terminal domain) IM45_1381 PF02033 Ribosome-binding factor A IM45_1383 PF04760 Translation initiation factor IF-2, N-terminal region IM45_1383 PF08364 Bacterial translation initiation factor IF-2 associated region IM45_1383 PF11987 Translation-initiation factor 2 IM45_1383 PF03144 Elongation factor Tu domain 2 IM45_1383 PF00009 Elongation factor Tu GTP binding domain IM45_1385 PF00575 S1 RNA binding domain IM45_1385 PF08529 NusA N-terminal domain IM45_1385 PF13184 NusA-like KH domain IM45_1389 PF03840 Preprotein translocase SecG subunit IM45_139 PF00005 ABC transporter IM45_1391 PF00809 Pterin binding enzyme IM45_1393 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IM45_1393 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IM45_1393 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IM45_1393 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IM45_1395 PF01434 Peptidase family M41 IM45_1395 PF06480 FtsH Extracellular IM45_1395 PF17862 AAA+ lid domain IM45_1395 PF00004 ATPase family associated with various cellular activities (AAA) IM45_1397 PF01728 FtsJ-like methyltransferase IM45_1399 PF03449 Transcription elongation factor, N-terminal IM45_1399 PF01272 Transcription elongation factor, GreA/GreB, C-term IM45_140 PF18075 FtsX extracellular domain IM45_140 PF02687 FtsX-like permease family IM45_1401 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IM45_1403 PF01926 50S ribosome-binding GTPase IM45_1403 PF01018 GTP1/OBG IM45_1405 PF01016 Ribosomal L27 protein IM45_1407 PF00829 Ribosomal prokaryotic L21 protein IM45_1409 PF00348 Polyprenyl synthetase IM45_1411 PF00162 Phosphoglycerate kinase IM45_1413 PF01116 Fructose-bisphosphate aldolase class-II IM45_1415 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IM45_1417 PF01812 5-formyltetrahydrofolate cyclo-ligase family IM45_1419 PF05164 Cell division protein ZapA IM45_1421 PF01494 FAD binding domain IM45_1423 PF01494 FAD binding domain IM45_1425 PF08543 Phosphomethylpyrimidine kinase IM45_1427 PF02540 NAD synthase IM45_1427 PF00958 GMP synthase C terminal domain IM45_1427 PF00117 Glutamine amidotransferase class-I IM45_1429 PF00571 CBS domain IM45_1429 PF00478 IMP dehydrogenase / GMP reductase domain IM45_143 PF04542 Sigma-70 region 2 IM45_143 PF00140 Sigma-70 factor, region 1.2 IM45_143 PF04545 Sigma-70, region 4 IM45_145 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IM45_147 PF00175 Oxidoreductase NAD-binding domain IM45_147 PF00970 Oxidoreductase FAD-binding domain IM45_149 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IM45_149 PF03900 Porphobilinogen deaminase, C-terminal domain IM45_150 PF02602 Uroporphyrinogen-III synthase HemD IM45_153 PF00795 Carbon-nitrogen hydrolase IM45_155 PF02130 Uncharacterized protein family UPF0054 IM45_157 PF04055 Radical SAM superfamily IM45_157 PF01938 TRAM domain IM45_157 PF00919 Uncharacterized protein family UPF0004 IM45_159 PF01494 FAD binding domain IM45_161 PF00533 BRCA1 C Terminus (BRCT) domain IM45_161 PF12826 Helix-hairpin-helix motif IM45_161 PF01653 NAD-dependent DNA ligase adenylation domain IM45_161 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IM45_161 PF03120 NAD-dependent DNA ligase OB-fold domain IM45_163 PF04354 ZipA, C-terminal FtsZ-binding domain IM45_167 PF00291 Pyridoxal-phosphate dependent enzyme IM45_169 PF00381 PTS HPr component phosphorylation site IM45_171 PF02896 PEP-utilising enzyme, TIM barrel domain IM45_171 PF05524 PEP-utilising enzyme, N-terminal IM45_171 PF00391 PEP-utilising enzyme, mobile domain IM45_173 PF07687 Peptidase dimerisation domain IM45_173 PF01546 Peptidase family M20/M25/M40 IM45_175 PF01259 SAICAR synthetase IM45_177 PF00551 Formyl transferase IM45_179 PF00586 AIR synthase related protein, N-terminal domain IM45_179 PF02769 AIR synthase related protein, C-terminal domain IM45_181 PF17941 Polyphosphate kinase C-terminal domain 1 IM45_181 PF13090 Polyphosphate kinase C-terminal domain 2 IM45_181 PF02503 Polyphosphate kinase middle domain IM45_181 PF13089 Polyphosphate kinase N-terminal domain IM45_183 PF00456 Transketolase, thiamine diphosphate binding domain IM45_183 PF02780 Transketolase, C-terminal domain IM45_183 PF02779 Transketolase, pyrimidine binding domain IM45_185 PF00923 Transaldolase/Fructose-6-phosphate aldolase IM45_187 PF00528 Binding-protein-dependent transport system inner membrane component IM45_189 PF00528 Binding-protein-dependent transport system inner membrane component IM45_190 PF00005 ABC transporter IM45_193 PF00893 Small Multidrug Resistance protein IM45_195 PF04060 Putative Fe-S cluster IM45_197 PF00579 tRNA synthetases class I (W and Y) IM45_197 PF01479 S4 domain IM45_199 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IM45_199 PF01243 Pyridoxamine 5'-phosphate oxidase IM45_201 PF01047 MarR family IM45_205 PF00929 Exonuclease IM45_207 PF00462 Glutaredoxin IM45_209 PF00677 Lumazine binding domain IM45_216 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IM45_216 PF00749 tRNA synthetases class I (E and Q), catalytic domain IM45_218 PF00258 Flavodoxin IM45_220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IM45_220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IM45_220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IM45_220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IM45_221 PF03441 FAD binding domain of DNA photolyase IM45_221 PF00875 DNA photolyase IM45_224 PF01784 NIF3 (NGG1p interacting factor 3) IM45_226 PF00549 CoA-ligase IM45_226 PF02629 CoA binding domain IM45_228 PF01618 MotA/TolQ/ExbB proton channel family IM45_230 PF02472 Biopolymer transport protein ExbD/TolR IM45_232 PF06519 TolA C-terminal IM45_234 PF04052 TolB amino-terminal domain IM45_234 PF07676 WD40-like Beta Propeller Repeat IM45_236 PF00691 OmpA family IM45_238 PF13174 Tetratricopeptide repeat IM45_238 PF16331 TolA binding protein trimerisation IM45_240 PF02445 Quinolinate synthetase A protein IM45_242 PF09179 TilS substrate binding domain IM45_242 PF11734 TilS substrate C-terminal domain IM45_242 PF01171 PP-loop family IM45_244 PF00999 Sodium/hydrogen exchanger family IM45_248 PF00950 ABC 3 transport family IM45_250 PF00005 ABC transporter IM45_252 PF00436 Single-strand binding protein family IM45_256 PF00375 Sodium:dicarboxylate symporter family IM45_258 PF01047 MarR family IM45_260 PF00625 Guanylate kinase IM45_262 PF01192 RNA polymerase Rpb6 IM45_264 PF13291 ACT domain IM45_264 PF02824 TGS domain IM45_264 PF04607 Region found in RelA / SpoT proteins IM45_266 PF00270 DEAD/DEAH box helicase IM45_266 PF00271 Helicase conserved C-terminal domain IM45_266 PF17191 RecG wedge domain IM45_268 PF01926 50S ribosome-binding GTPase IM45_270 PF01612 3'-5' exonuclease IM45_270 PF00476 DNA polymerase family A IM45_270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IM45_270 PF01367 5'-3' exonuclease, C-terminal SAM fold IM45_272 PF12170 DNA polymerase III tau subunit V interacting with alpha IM45_272 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IM45_272 PF12169 DNA polymerase III subunits gamma and tau domain III IM45_274 PF02575 YbaB/EbfC DNA-binding family IM45_276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IM45_276 PF00183 Hsp90 protein IM45_278 PF05191 Adenylate kinase, active site lid IM45_280 PF00731 AIR carboxylase IM45_282 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IM45_282 PF02222 ATP-grasp domain IM45_284 PF00149 Calcineurin-like phosphoesterase IM45_286 PF01406 tRNA synthetases class I (C) catalytic domain IM45_286 PF09190 DALR domain IM45_288 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IM45_288 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IM45_291 PF00990 Diguanylate cyclase, GGDEF domain IM45_291 PF17154 Gammaproteobacterial periplasmic sensor domain IM45_291 PF00672 HAMP domain IM45_291 PF00563 EAL domain IM45_293 PF01295 Adenylate cyclase, class-I IM45_293 PF12633 Adenylate cyclase NT domain IM45_295 PF01678 Diaminopimelate epimerase IM45_297 PF13419 Haloacid dehalogenase-like hydrolase IM45_299 PF13361 UvrD-like helicase C-terminal domain IM45_299 PF00580 UvrD/REP helicase N-terminal domain IM45_301 PF01544 CorA-like Mg2+ transporter protein IM45_305 PF18053 DNA gyrase B subunit insert domain IM45_305 PF01751 Toprim domain IM45_305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IM45_305 PF00204 DNA gyrase B IM45_305 PF00986 DNA gyrase B subunit, carboxyl terminus IM45_307 PF02768 DNA polymerase III beta subunit, C-terminal domain IM45_307 PF02767 DNA polymerase III beta subunit, central domain IM45_307 PF00712 DNA polymerase III beta subunit, N-terminal domain IM45_309 PF08299 Bacterial dnaA protein helix-turn-helix IM45_309 PF00308 Bacterial dnaA protein IM45_309 PF11638 DnaA N-terminal domain IM45_313 PF00468 Ribosomal protein L34 IM45_315 PF00825 Ribonuclease P IM45_319 PF14849 YidC periplasmic domain IM45_319 PF02096 60Kd inner membrane protein IM45_320 PF10396 GTP-binding protein TrmE N-terminus IM45_320 PF12631 MnmE helical domain IM45_320 PF01926 50S ribosome-binding GTPase IM45_323 PF01380 SIS domain IM45_325 PF12804 MobA-like NTP transferase domain IM45_325 PF14602 Hexapeptide repeat of succinyl-transferase IM45_325 PF00132 Bacterial transferase hexapeptide (six repeats) IM45_327 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IM45_327 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IM45_329 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IM45_329 PF02874 ATP synthase alpha/beta family, beta-barrel domain IM45_331 PF00231 ATP synthase IM45_333 PF02874 ATP synthase alpha/beta family, beta-barrel domain IM45_333 PF00306 ATP synthase alpha/beta chain, C terminal domain IM45_333 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IM45_335 PF00213 ATP synthase delta (OSCP) subunit IM45_337 PF00430 ATP synthase B/B' CF(0) IM45_339 PF00137 ATP synthase subunit C IM45_341 PF00119 ATP synthase A chain IM45_343 PF01134 Glucose inhibited division protein A IM45_343 PF13932 GidA associated domain IM45_345 PF01571 Aminomethyltransferase folate-binding domain IM45_347 PF17768 RecJ OB domain IM45_347 PF01368 DHH family IM45_347 PF02272 DHHA1 domain IM45_349 PF00472 RF-1 domain IM45_349 PF03462 PCRF domain IM45_351 PF00152 tRNA synthetases class II (D, K and N) IM45_351 PF01336 OB-fold nucleic acid binding domain IM45_353 PF01177 Asp/Glu/Hydantoin racemase IM45_361 PF02092 Glycyl-tRNA synthetase beta subunit IM45_361 PF05746 DALR anticodon binding domain IM45_363 PF02091 Glycyl-tRNA synthetase alpha subunit IM45_365 PF05958 tRNA (Uracil-5-)-methyltransferase IM45_367 PF02219 Methylenetetrahydrofolate reductase IM45_370 PF01340 Met Apo-repressor, MetJ IM45_372 PF01197 Ribosomal protein L31 IM45_374 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IM45_374 PF18074 Primosomal protein N C-terminal domain IM45_374 PF17764 3′ DNA-binding domain (3′BD) IM45_374 PF00271 Helicase conserved C-terminal domain IM45_374 PF00270 DEAD/DEAH box helicase IM45_376 PF05036 Sporulation related domain IM45_377 PF00227 Proteasome subunit IM45_379 PF07724 AAA domain (Cdc48 subfamily) IM45_379 PF00004 ATPase family associated with various cellular activities (AAA) IM45_381 PF00121 Triosephosphate isomerase IM45_385 PF00365 Phosphofructokinase IM45_387 PF00132 Bacterial transferase hexapeptide (six repeats) IM45_387 PF06426 Serine acetyltransferase, N-terminal IM45_389 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IM45_389 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IM45_391 PF00462 Glutaredoxin IM45_393 PF00581 Rhodanese-like domain IM45_395 PF01551 Peptidase family M23 IM45_397 PF04748 Divergent polysaccharide deacetylase IM45_399 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IM45_401 PF01467 Cytidylyltransferase-like IM45_403 PF06827 Zinc finger found in FPG and IleRS IM45_403 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IM45_403 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IM45_405 PF00471 Ribosomal protein L33 IM45_407 PF00830 Ribosomal L28 family IM45_409 PF03755 YicC-like family, N-terminal region IM45_409 PF08340 Domain of unknown function (DUF1732) IM45_411 PF00156 Phosphoribosyl transferase domain IM45_413 PF00692 dUTPase IM45_414 PF02441 Flavoprotein IM45_414 PF04127 DNA / pantothenate metabolism flavoprotein IM45_421 PF03808 Glycosyl transferase WecB/TagA/CpsF family IM45_423 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 IM45_425 PF06899 WzyE protein, O-antigen assembly polymerase IM45_427 PF01943 Polysaccharide biosynthesis protein IM45_430 PF00483 Nucleotidyl transferase IM45_431 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IM45_432 PF16363 GDP-mannose 4,6 dehydratase IM45_433 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IM45_433 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IM45_433 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IM45_434 PF02350 UDP-N-acetylglucosamine 2-epimerase IM45_441 PF00953 Glycosyl transferase family 4 IM45_443 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IM45_443 PF07498 Rho termination factor, N-terminal domain IM45_443 PF07497 Rho termination factor, RNA-binding domain IM45_445 PF00085 Thioredoxin IM45_447 PF04219 Protein of unknown function, DUF IM45_449 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IM45_449 PF03466 LysR substrate binding domain IM45_451 PF00793 DAHP synthetase I family IM45_453 PF13525 Outer membrane lipoprotein IM45_455 PF01479 S4 domain IM45_455 PF00849 RNA pseudouridylate synthase IM45_457 PF00004 ATPase family associated with various cellular activities (AAA) IM45_457 PF10431 C-terminal, D2-small domain, of ClpB protein IM45_457 PF02861 Clp amino terminal domain, pathogenicity island component IM45_457 PF17871 AAA lid domain IM45_457 PF07724 AAA domain (Cdc48 subfamily) IM45_459 PF01245 Ribosomal protein L19 IM45_461 PF01746 tRNA (Guanine-1)-methyltransferase IM45_463 PF01782 RimM N-terminal domain IM45_463 PF05239 PRC-barrel domain IM45_465 PF00886 Ribosomal protein S16 IM45_467 PF02978 Signal peptide binding domain IM45_467 PF00448 SRP54-type protein, GTPase domain IM45_467 PF02881 SRP54-type protein, helical bundle domain IM45_469 PF04262 Glutamate-cysteine ligase IM45_473 PF02599 Global regulator protein family IM45_475 PF02272 DHHA1 domain IM45_475 PF01411 tRNA synthetases class II (A) IM45_475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IM45_477 PF00154 recA bacterial DNA recombination protein IM45_479 PF00497 Bacterial extracellular solute-binding proteins, family 3 IM45_481 PF00528 Binding-protein-dependent transport system inner membrane component IM45_483 PF05188 MutS domain II IM45_483 PF05190 MutS family domain IV IM45_483 PF01624 MutS domain I IM45_483 PF05192 MutS domain III IM45_483 PF00488 MutS domain V IM45_485 PF01551 Peptidase family M23 IM45_485 PF01476 LysM domain IM45_487 PF02542 YgbB family IM45_488 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IM45_489 PF04977 Septum formation initiator IM45_494 PF00009 Elongation factor Tu GTP binding domain IM45_498 PF01507 Phosphoadenosine phosphosulfate reductase family IM45_499 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IM45_499 PF10414 Sirohaem synthase dimerisation region IM45_499 PF14824 Sirohaem biosynthesis protein central IM45_501 PF01507 Phosphoadenosine phosphosulfate reductase family IM45_503 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IM45_503 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IM45_504 PF00667 FAD binding domain IM45_504 PF00258 Flavodoxin IM45_504 PF00175 Oxidoreductase NAD-binding domain IM45_507 PF01242 6-pyruvoyl tetrahydropterin synthase IM45_509 PF04055 Radical SAM superfamily IM45_511 PF00113 Enolase, C-terminal TIM barrel domain IM45_511 PF03952 Enolase, N-terminal domain IM45_513 PF00117 Glutamine amidotransferase class-I IM45_513 PF06418 CTP synthase N-terminus IM45_515 PF02824 TGS domain IM45_515 PF04607 Region found in RelA / SpoT proteins IM45_515 PF13291 ACT domain IM45_517 PF01048 Phosphorylase superfamily IM45_519 PF01521 Iron-sulphur cluster biosynthesis IM45_521 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal IM45_521 PF00905 Penicillin binding protein transpeptidase domain IM45_521 PF14814 Bifunctional transglycosylase second domain IM45_521 PF00912 Transglycosylase IM45_523 PF01258 Prokaryotic dksA/traR C4-type zinc finger IM45_525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IM45_527 PF12627 Probable RNA and SrmB- binding site of polymerase A IM45_527 PF12626 Polymerase A arginine-rich C-terminus IM45_527 PF01743 Poly A polymerase head domain IM45_529 PF02548 Ketopantoate hydroxymethyltransferase IM45_531 PF02569 Pantoate-beta-alanine ligase IM45_533 PF13603 Leucyl-tRNA synthetase, Domain 2 IM45_533 PF00133 tRNA synthetases class I (I, L, M and V) IM45_533 PF08264 Anticodon-binding domain of tRNA IM45_535 PF04390 Lipopolysaccharide-assembly IM45_536 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IM45_536 PF06144 DNA polymerase III, delta subunit IM45_537 PF01467 Cytidylyltransferase-like IM45_541 PF03717 Penicillin-binding Protein dimerisation domain IM45_541 PF00905 Penicillin binding protein transpeptidase domain IM45_542 PF01098 Cell cycle protein IM45_545 PF03099 Biotin/lipoate A/B protein ligase family IM45_547 PF04055 Radical SAM superfamily IM45_547 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IM45_549 PF07690 Major Facilitator Superfamily IM45_551 PF01066 CDP-alcohol phosphatidyltransferase IM45_556 PF10282 Lactonase, 7-bladed beta-propeller IM45_558 PF00202 Aminotransferase class-III IM45_560 PF06968 Biotin and Thiamin Synthesis associated domain IM45_560 PF04055 Radical SAM superfamily IM45_561 PF00155 Aminotransferase class I and II IM45_562 PF08241 Methyltransferase domain IM45_568 PF01933 Uncharacterised protein family UPF0052 IM45_572 PF00300 Histidine phosphatase superfamily (branch 1) IM45_574 PF00266 Aminotransferase class-V IM45_576 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IM45_578 PF02224 Cytidylate kinase IM45_580 PF00575 S1 RNA binding domain IM45_582 PF00216 Bacterial DNA-binding protein IM45_586 PF00664 ABC transporter transmembrane region IM45_586 PF00005 ABC transporter IM45_589 PF03966 Trm112p-like protein IM45_591 PF01323 DSBA-like thioredoxin domain IM45_595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IM45_595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IM45_597 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IM45_597 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IM45_599 PF01042 Endoribonuclease L-PSP IM45_601 PF00313 'Cold-shock' DNA-binding domain IM45_603 PF06508 Queuosine biosynthesis protein QueC IM45_605 PF00004 ATPase family associated with various cellular activities (AAA) IM45_605 PF05362 Lon protease (S16) C-terminal proteolytic domain IM45_605 PF02190 ATP-dependent protease La (LON) substrate-binding domain IM45_607 PF07724 AAA domain (Cdc48 subfamily) IM45_607 PF06689 ClpX C4-type zinc finger IM45_607 PF10431 C-terminal, D2-small domain, of ClpB protein IM45_609 PF00574 Clp protease IM45_611 PF05697 Bacterial trigger factor protein (TF) IM45_611 PF05698 Bacterial trigger factor protein (TF) C-terminus IM45_611 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IM45_613 PF01722 BolA-like protein IM45_615 PF06481 COX Aromatic Rich Motif IM45_615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IM45_617 PF00115 Cytochrome C and Quinol oxidase polypeptide I IM45_619 PF00510 Cytochrome c oxidase subunit III IM45_620 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IM45_621 PF01040 UbiA prenyltransferase family IM45_625 PF07690 Major Facilitator Superfamily IM45_627 PF08546 Ketopantoate reductase PanE/ApbA C terminal IM45_627 PF02558 Ketopantoate reductase PanE/ApbA IM45_629 PF02926 THUMP domain IM45_629 PF02568 Thiamine biosynthesis protein (ThiI) IM45_631 PF00348 Polyprenyl synthetase IM45_633 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IM45_633 PF02780 Transketolase, C-terminal domain IM45_633 PF02779 Transketolase, pyrimidine binding domain IM45_635 PF05746 DALR anticodon binding domain IM45_635 PF03485 Arginyl tRNA synthetase N terminal domain IM45_635 PF00750 tRNA synthetases class I (R) IM45_637 PF03023 Lipid II flippase MurJ IM45_639 PF01648 4'-phosphopantetheinyl transferase superfamily IM45_640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IM45_643 PF07650 KH domain IM45_643 PF01926 50S ribosome-binding GTPase IM45_644 PF00035 Double-stranded RNA binding motif IM45_644 PF14622 Ribonuclease-III-like IM45_647 PF10502 Signal peptidase, peptidase S26 IM45_648 PF06421 GTP-binding protein LepA C-terminus IM45_648 PF03144 Elongation factor Tu domain 2 IM45_648 PF00009 Elongation factor Tu GTP binding domain IM45_648 PF00679 Elongation factor G C-terminus IM45_652 PF08264 Anticodon-binding domain of tRNA IM45_652 PF00133 tRNA synthetases class I (I, L, M and V) IM45_652 PF10458 Valyl tRNA synthetase tRNA binding arm IM45_654 PF04364 DNA polymerase III chi subunit, HolC IM45_656 PF00883 Cytosol aminopeptidase family, catalytic domain IM45_656 PF02789 Cytosol aminopeptidase family, N-terminal domain IM45_658 PF03739 Lipopolysaccharide export system permease LptF/LptG IM45_661 PF03739 Lipopolysaccharide export system permease LptF/LptG IM45_662 PF02540 NAD synthase IM45_664 PF17827 PrmC N-terminal domain IM45_664 PF13847 Methyltransferase domain IM45_665 PF03462 PCRF domain IM45_665 PF00472 RF-1 domain IM45_668 PF03550 Outer membrane lipoprotein LolB IM45_669 PF00288 GHMP kinases N terminal domain IM45_672 PF14572 Phosphoribosyl synthetase-associated domain IM45_672 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IM45_674 PF01195 Peptidyl-tRNA hydrolase IM45_676 PF06071 Protein of unknown function (DUF933) IM45_676 PF01926 50S ribosome-binding GTPase IM45_680 PF00773 RNB domain IM45_680 PF08206 Ribonuclease B OB domain IM45_680 PF17876 Cold shock domain IM45_680 PF00575 S1 RNA binding domain IM45_682 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IM45_686 PF06305 Lipopolysaccharide assembly protein A domain IM45_690 PF00925 GTP cyclohydrolase II IM45_692 PF03466 LysR substrate binding domain IM45_692 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IM45_694 PF08272 Topoisomerase I zinc-ribbon-like IM45_694 PF01131 DNA topoisomerase IM45_694 PF01396 Topoisomerase DNA binding C4 zinc finger IM45_694 PF01751 Toprim domain IM45_698 PF03795 YCII-related domain IM45_700 PF13091 PLD-like domain IM45_700 PF13396 Phospholipase_D-nuclease N-terminal IM45_702 PF00816 H-NS histone family IM45_704 PF01435 Peptidase family M48 IM45_706 PF17516 ProQ C-terminal domain IM45_706 PF04352 ProQ/FINO family IM45_708 PF00210 Ferritin-like domain IM45_710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IM45_710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IM45_712 PF00224 Pyruvate kinase, barrel domain IM45_712 PF02887 Pyruvate kinase, alpha/beta domain IM45_714 PF01566 Natural resistance-associated macrophage protein IM45_716 PF05491 RuvB C-terminal winged helix domain IM45_716 PF17864 RuvB AAA lid domain IM45_716 PF05496 Holliday junction DNA helicase RuvB P-loop domain IM45_718 PF07499 RuvA, C-terminal domain IM45_718 PF01330 RuvA N terminal domain IM45_720 PF02075 Crossover junction endodeoxyribonuclease RuvC IM45_722 PF01709 Transcriptional regulator IM45_724 PF01336 OB-fold nucleic acid binding domain IM45_724 PF00152 tRNA synthetases class II (D, K and N) IM45_724 PF02938 GAD domain IM45_726 PF02811 PHP domain IM45_729 PF02403 Seryl-tRNA synthetase N-terminal domain IM45_729 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IM45_731 PF03548 Outer membrane lipoprotein carrier protein LolA IM45_733 PF09397 Ftsk gamma domain IM45_733 PF17854 FtsK alpha domain IM45_733 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IM45_733 PF01580 FtsK/SpoIIIE family IM45_733 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IM45_733 PF17854 FtsK alpha domain IM45_733 PF09397 Ftsk gamma domain IM45_733 PF01580 FtsK/SpoIIIE family IM45_735 PF07992 Pyridine nucleotide-disulphide oxidoreductase IM45_737 PF01176 Translation initiation factor 1A / IF-1 IM45_739 PF00005 ABC transporter IM45_741 PF00497 Bacterial extracellular solute-binding proteins, family 3 IM45_742 PF00528 Binding-protein-dependent transport system inner membrane component IM45_743 PF00528 Binding-protein-dependent transport system inner membrane component IM45_747 PF00338 Ribosomal protein S10p/S20e IM45_749 PF00297 Ribosomal protein L3 IM45_751 PF00573 Ribosomal protein L4/L1 family IM45_752 PF00276 Ribosomal protein L23 IM45_755 PF00181 Ribosomal Proteins L2, RNA binding domain IM45_755 PF03947 Ribosomal Proteins L2, C-terminal domain IM45_757 PF00203 Ribosomal protein S19 IM45_759 PF00237 Ribosomal protein L22p/L17e IM45_761 PF00189 Ribosomal protein S3, C-terminal domain IM45_761 PF07650 KH domain IM45_763 PF00831 Ribosomal L29 protein IM45_765 PF00252 Ribosomal protein L16p/L10e IM45_767 PF00366 Ribosomal protein S17 IM45_769 PF00238 Ribosomal protein L14p/L23e IM45_771 PF00467 KOW motif IM45_771 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IM45_773 PF00281 Ribosomal protein L5 IM45_773 PF00673 ribosomal L5P family C-terminus IM45_775 PF00253 Ribosomal protein S14p/S29e IM45_777 PF00410 Ribosomal protein S8 IM45_779 PF00347 Ribosomal protein L6 IM45_781 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IM45_783 PF03719 Ribosomal protein S5, C-terminal domain IM45_783 PF00333 Ribosomal protein S5, N-terminal domain IM45_785 PF00327 Ribosomal protein L30p/L7e IM45_787 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IM45_789 PF00344 SecY translocase IM45_791 PF00444 Ribosomal protein L36 IM45_793 PF00416 Ribosomal protein S13/S18 IM45_795 PF00411 Ribosomal protein S11 IM45_797 PF00163 Ribosomal protein S4/S9 N-terminal domain IM45_797 PF01479 S4 domain IM45_799 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IM45_799 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IM45_799 PF01000 RNA polymerase Rpb3/RpoA insert domain IM45_801 PF01196 Ribosomal protein L17 IM45_807 PF00485 Phosphoribulokinase / Uridine kinase family IM45_809 PF00300 Histidine phosphatase superfamily (branch 1) IM45_811 PF05175 Methyltransferase small domain IM45_813 PF01264 Chorismate synthase IM45_815 PF02801 Beta-ketoacyl synthase, C-terminal domain IM45_815 PF00109 Beta-ketoacyl synthase, N-terminal domain IM45_817 PF11890 Domain of unknown function (DUF3410) IM45_817 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IM45_817 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IM45_819 PF01416 tRNA pseudouridine synthase IM45_821 PF17848 Acetyl-coA carboxylase zinc finger domain IM45_821 PF01039 Carboxyl transferase domain IM45_823 PF05036 Sporulation related domain IM45_825 PF02875 Mur ligase family, glutamate ligase domain IM45_825 PF08245 Mur ligase middle domain IM45_827 PF02674 Colicin V production protein IM45_829 PF00156 Phosphoribosyl transferase domain IM45_831 PF02441 Flavoprotein IM45_833 PF00361 Proton-conducting membrane transporter IM45_835 PF00361 Proton-conducting membrane transporter IM45_837 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IM45_839 PF00361 Proton-conducting membrane transporter IM45_839 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IM45_841 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IM45_843 PF12838 4Fe-4S dicluster domain IM45_844 PF00146 NADH dehydrogenase IM45_845 PF01568 Molydopterin dinucleotide binding domain IM45_845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IM45_845 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IM45_845 PF00384 Molybdopterin oxidoreductase IM45_851 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IM45_851 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IM45_851 PF10531 SLBB domain IM45_853 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IM45_853 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IM45_855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IM45_857 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IM45_859 PF00871 Acetokinase family IM45_861 PF01515 Phosphate acetyl/butaryl transferase IM45_861 PF07085 DRTGG domain IM45_863 PF00111 2Fe-2S iron-sulfur cluster binding domain IM45_865 PF00268 Ribonucleotide reductase, small chain IM45_867 PF02867 Ribonucleotide reductase, barrel domain IM45_867 PF03477 ATP cone domain IM45_867 PF00317 Ribonucleotide reductase, all-alpha domain IM45_871 PF03989 DNA gyrase C-terminal domain, beta-propeller IM45_871 PF00521 DNA gyrase/topoisomerase IV, subunit A IM45_873 PF07478 D-ala D-ala ligase C-terminus IM45_873 PF01820 D-ala D-ala ligase N-terminus IM45_876 PF01386 Ribosomal L25p family IM45_878 PF00877 NlpC/P60 family IM45_880 PF01261 Xylose isomerase-like TIM barrel IM45_882 PF00324 Amino acid permease IM45_884 PF01227 GTP cyclohydrolase I IM45_886 PF00692 dUTPase IM45_888 PF09334 tRNA synthetases class I (M) IM45_890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IM45_890 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IM45_892 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IM45_892 PF01502 Phosphoribosyl-AMP cyclohydrolase IM45_893 PF00977 Histidine biosynthesis protein IM45_894 PF00977 Histidine biosynthesis protein IM45_898 PF00117 Glutamine amidotransferase class-I IM45_899 PF00475 Imidazoleglycerol-phosphate dehydratase IM45_902 PF00155 Aminotransferase class I and II IM45_903 PF00815 Histidinol dehydrogenase IM45_906 PF08029 HisG, C-terminal domain IM45_906 PF01634 ATP phosphoribosyltransferase IM45_908 PF01370 NAD dependent epimerase/dehydratase family IM45_910 PF00753 Metallo-beta-lactamase superfamily IM45_912 PF00155 Aminotransferase class I and II IM45_914 PF01336 OB-fold nucleic acid binding domain IM45_914 PF00152 tRNA synthetases class II (D, K and N) IM45_916 PF01180 Dihydroorotate dehydrogenase IM45_918 PF07977 FabA-like domain IM45_920 PF13654 AAA domain IM45_920 PF05362 Lon protease (S16) C-terminal proteolytic domain IM45_922 PF08755 Hemimethylated DNA-binding protein YccV like IM45_924 PF04358 DsrC like protein IM45_927 PF02911 Formyl transferase, C-terminal domain IM45_927 PF00551 Formyl transferase IM45_929 PF01327 Polypeptide deformylase IM45_931 PF01300 Telomere recombination IM45_933 PF08501 Shikimate dehydrogenase substrate binding domain IM45_933 PF01488 Shikimate / quinate 5-dehydrogenase IM45_933 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IM45_935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IM45_935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IM45_935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IM45_935 PF10371 Domain of unknown function IM45_935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IM45_937 PF10415 Fumarase C C-terminus IM45_937 PF00206 Lyase IM45_939 PF00490 Delta-aminolevulinic acid dehydratase IM45_944 PF04356 Protein of unknown function (DUF489) IM45_946 PF00206 Lyase IM45_946 PF08328 Adenylosuccinate lyase C-terminal IM45_948 PF12704 MacB-like periplasmic core domain IM45_948 PF02687 FtsX-like permease family IM45_950 PF00005 ABC transporter IM45_951 PF12704 MacB-like periplasmic core domain IM45_951 PF02687 FtsX-like permease family IM45_954 PF13036 Peptidoglycan-synthase activator LpoB IM45_956 PF01230 HIT domain IM45_958 PF01026 TatD related DNase IM45_960 PF09115 DNA polymerase III, delta subunit, C terminal IM45_961 PF02223 Thymidylate kinase IM45_964 PF01063 Amino-transferase class IV IM45_966 PF00550 Phosphopantetheine attachment site IM45_969 PF00698 Acyl transferase domain IM45_972 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IM45_972 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IM45_974 PF02504 Fatty acid synthesis protein IM45_976 PF01783 Ribosomal L32p protein family IM45_978 PF01479 S4 domain IM45_978 PF00849 RNA pseudouridylate synthase IM45_980 PF10150 Ribonuclease E/G family IM45_980 PF00575 S1 RNA binding domain IM45_980 PF12111 Polyribonucleotide phosphorylase C terminal IM45_982 PF01979 Amidohydrolase family IM45_984 PF01343 Peptidase family S49 IM45_986 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IM45_986 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IM45_988 PF02600 Disulfide bond formation protein DsbB IM45_990 PF03775 Septum formation inhibitor MinC, C-terminal domain IM45_990 PF05209 Septum formation inhibitor MinC, N-terminal domain IM45_992 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IM45_994 PF03776 Septum formation topological specificity factor MinE IM45_996 PF00814 Glycoprotease family IM45_998 PF03613 PTS system mannose/fructose/sorbose family IID component