locus-tag class description IM40_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal IM40_00010 IPR022637 DNA polymerase III, beta sliding clamp, central IM40_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal IM40_00010 IPR001001 DNA polymerase III, beta sliding clamp IM40_00015 IPR003593 AAA+ ATPase domain IM40_00015 IPR001238 DNA-binding, RecF IM40_00015 IPR018078 DNA-binding, RecF, conserved site IM40_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00015 IPR003395 RecF/RecN/SMC, N-terminal IM40_00015 IPR042174 DNA-binding RecF, domain 2 IM40_00020 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain IM40_00020 IPR006171 TOPRIM domain IM40_00020 IPR018522 DNA topoisomerase, type IIA, conserved site IM40_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IM40_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00020 IPR002288 DNA gyrase B subunit, C-terminal IM40_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IM40_00020 IPR001241 DNA topoisomerase, type IIA IM40_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00020 IPR011557 DNA gyrase, subunit B IM40_00020 IPR003594 Histidine kinase/HSP90-like ATPase IM40_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IM40_00040 IPR003817 Phosphatidylserine decarboxylase-related IM40_00040 IPR033175 Phosphatidylserine decarboxylase, archaeal-type IM40_00045 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase IM40_00045 IPR000462 CDP-alcohol phosphatidyltransferase IM40_00050 IPR000073 Alpha/beta hydrolase fold-1 IM40_00050 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I IM40_00050 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain IM40_00050 IPR029058 Alpha/Beta hydrolase fold IM40_00060 IPR033454 RecG, wedge domain IM40_00060 IPR001650 Helicase, C-terminal IM40_00060 IPR012340 Nucleic acid-binding, OB-fold IM40_00060 IPR014001 Helicase superfamily 1/2, ATP-binding domain IM40_00060 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00060 IPR004609 ATP-dependent DNA helicase RecG IM40_00060 IPR011545 DEAD/DEAH box helicase domain IM40_00065 IPR004814 Oligopeptide transporter OPT IM40_00065 IPR004813 Oligopeptide transporter, OPT superfamily IM40_00075 IPR036291 NAD(P)-binding domain superfamily IM40_00075 IPR017476 UDP-glucose/GDP-mannose dehydrogenase IM40_00075 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal IM40_00075 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily IM40_00075 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation IM40_00075 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal IM40_00075 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase IM40_00075 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IM40_00080 IPR001451 Hexapeptide repeat IM40_00080 IPR011004 Trimeric LpxA-like superfamily IM40_00085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IM40_00085 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase IM40_00085 IPR015424 Pyridoxal phosphate-dependent transferase IM40_00085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IM40_00090 IPR001962 Asparagine synthase IM40_00090 IPR033738 Asparagine synthase, N-terminal domain IM40_00090 IPR017932 Glutamine amidotransferase type 2 domain IM40_00090 IPR006426 Asparagine synthase, glutamine-hydrolyzing IM40_00090 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_00105 IPR003425 CCB3/YggT IM40_00110 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase IM40_00110 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IM40_00110 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site IM40_00110 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IM40_00110 IPR036291 NAD(P)-binding domain superfamily IM40_00140 IPR017932 Glutamine amidotransferase type 2 domain IM40_00140 IPR006426 Asparagine synthase, glutamine-hydrolyzing IM40_00140 IPR033738 Asparagine synthase, N-terminal domain IM40_00140 IPR001962 Asparagine synthase IM40_00140 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_00160 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00160 IPR017871 ABC transporter, conserved site IM40_00160 IPR003439 ABC transporter-like IM40_00160 IPR003593 AAA+ ATPase domain IM40_00180 IPR004638 Drug resistance transporter EmrB-like IM40_00180 IPR020846 Major facilitator superfamily domain IM40_00180 IPR036259 MFS transporter superfamily IM40_00180 IPR011701 Major facilitator superfamily IM40_00185 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IM40_00200 IPR013126 Heat shock protein 70 family IM40_00200 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IM40_00200 IPR018181 Heat shock protein 70, conserved site IM40_00200 IPR012725 Chaperone DnaK IM40_00200 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IM40_00205 IPR001305 Heat shock protein DnaJ, cysteine-rich domain IM40_00205 IPR008971 HSP40/DnaJ peptide-binding IM40_00205 IPR018253 DnaJ domain, conserved site IM40_00205 IPR036869 Chaperone J-domain superfamily IM40_00205 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IM40_00205 IPR001623 DnaJ domain IM40_00205 IPR002939 Chaperone DnaJ, C-terminal IM40_00205 IPR012724 Chaperone DnaJ IM40_00230 IPR027469 Cation efflux transmembrane domain superfamily IM40_00230 IPR023783 Cation efflux pump FieF IM40_00230 IPR027470 Cation efflux protein, cytoplasmic domain IM40_00230 IPR002524 Cation efflux protein IM40_00230 IPR036837 Cation efflux protein, cytoplasmic domain superfamily IM40_00240 IPR002298 DNA polymerase A IM40_00240 IPR008918 Helix-hairpin-helix motif, class 2 IM40_00240 IPR029060 PIN-like domain superfamily IM40_00240 IPR012337 Ribonuclease H-like superfamily IM40_00240 IPR036397 Ribonuclease H superfamily IM40_00240 IPR020045 DNA polymerase I-like, H3TH domain IM40_00240 IPR013520 Exonuclease, RNase T/DNA polymerase III IM40_00240 IPR001098 DNA-directed DNA polymerase, family A, palm domain IM40_00240 IPR018320 DNA polymerase 1 IM40_00240 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IM40_00240 IPR002421 5'-3' exonuclease, N-terminal IM40_00240 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IM40_00240 IPR002562 3'-5' exonuclease domain IM40_00240 IPR019760 DNA-directed DNA polymerase, family A, conserved site IM40_00245 IPR000271 Ribosomal protein L34 IM40_00245 IPR020939 Ribosomal protein L34, conserved site IM40_00255 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00255 IPR013369 Type II secretion system GspE IM40_00255 IPR037257 General secretory system II, protein E, N-terminal superfamily IM40_00255 IPR003593 AAA+ ATPase domain IM40_00255 IPR042181 Type II secretion system, protein E, N-terminal IM40_00255 IPR001482 Type II/IV secretion system protein IM40_00260 IPR042094 Type II secretion system F domain superfamily IM40_00260 IPR018076 Type II secretion system F domain IM40_00260 IPR001992 Type II secretion system conserved site IM40_00260 IPR011850 General secretion pathway protein F IM40_00260 IPR003004 GspF/PilC family IM40_00295 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type IM40_00295 IPR001347 Sugar isomerase (SIS) IM40_00295 IPR035474 KpsF-like, SIS domain IM40_00295 IPR000644 CBS domain IM40_00320 IPR023171 Na/H antiporter domain superfamily IM40_00320 IPR004670 Na+/H+ antiporter NhaA IM40_00325 IPR008144 Guanylate kinase-like domain IM40_00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00325 IPR020590 Guanylate kinase, conserved site IM40_00325 IPR017665 Guanylate kinase IM40_00325 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IM40_00330 IPR004734 Multidrug resistance protein IM40_00330 IPR004812 Drug resistance transporter Bcr/CmlA subfamily IM40_00330 IPR011701 Major facilitator superfamily IM40_00330 IPR020846 Major facilitator superfamily domain IM40_00330 IPR036259 MFS transporter superfamily IM40_00335 IPR002293 Amino acid/polyamine transporter I IM40_00345 IPR017937 Thioredoxin, conserved site IM40_00345 IPR036249 Thioredoxin-like superfamily IM40_00345 IPR005746 Thioredoxin IM40_00345 IPR013766 Thioredoxin domain IM40_00355 IPR005651 Trm112-like IM40_00365 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00365 IPR005895 ABC transporter, haem export, CcmA IM40_00365 IPR017871 ABC transporter, conserved site IM40_00365 IPR003439 ABC transporter-like IM40_00365 IPR003593 AAA+ ATPase domain IM40_00370 IPR000086 NUDIX hydrolase domain IM40_00370 IPR003561 Mutator MutT IM40_00370 IPR020476 NUDIX hydrolase IM40_00370 IPR015797 NUDIX hydrolase-like domain superfamily IM40_00370 IPR020084 NUDIX hydrolase, conserved site IM40_00375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00375 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type IM40_00380 IPR033749 Polyprenyl synthetase, conserved site IM40_00380 IPR008949 Isoprenoid synthase domain superfamily IM40_00380 IPR000092 Polyprenyl synthetase IM40_00435 IPR003774 Protein of unknown function UPF0301 IM40_00445 IPR042105 Ribosomal protein L31 superfamily IM40_00445 IPR002150 Ribosomal protein L31 IM40_00445 IPR034704 L28p-like IM40_00445 IPR027491 Ribosomal protein L31 type A IM40_00450 IPR041720 Aldolase FbaB-like, archaeal-type IM40_00450 IPR013785 Aldolase-type TIM barrel IM40_00450 IPR002915 DeoC/FbaB/ lacD aldolase IM40_00465 IPR042117 OMPP1/FadL/TodX superfamily IM40_00465 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IM40_00470 IPR000873 AMP-dependent synthetase/ligase IM40_00470 IPR042099 AMP-dependent synthetase-like superfamily IM40_00470 IPR020845 AMP-binding, conserved site IM40_00470 IPR025110 AMP-binding enzyme, C-terminal domain IM40_00475 IPR020615 Thiolase, acyl-enzyme intermediate active site IM40_00475 IPR020610 Thiolase, active site IM40_00475 IPR020617 Thiolase, C-terminal IM40_00475 IPR020616 Thiolase, N-terminal IM40_00475 IPR020613 Thiolase, conserved site IM40_00475 IPR016039 Thiolase-like IM40_00475 IPR002155 Thiolase IM40_00480 IPR036291 NAD(P)-binding domain superfamily IM40_00480 IPR001753 Enoyl-CoA hydratase/isomerase IM40_00480 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IM40_00480 IPR029045 ClpP/crotonase-like domain superfamily IM40_00480 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IM40_00480 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IM40_00480 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IM40_00485 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IM40_00485 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IM40_00485 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IM40_00485 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IM40_00485 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IM40_00485 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IM40_00485 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IM40_00495 IPR020904 Short-chain dehydrogenase/reductase, conserved site IM40_00495 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_00495 IPR036291 NAD(P)-binding domain superfamily IM40_00500 IPR001466 Beta-lactamase-related IM40_00500 IPR001586 Beta-lactamase, class-C active site IM40_00500 IPR012338 Beta-lactamase/transpeptidase-like IM40_00505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00505 IPR003594 Histidine kinase/HSP90-like ATPase IM40_00505 IPR006171 TOPRIM domain IM40_00505 IPR001241 DNA topoisomerase, type IIA IM40_00505 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative IM40_00505 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00505 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00505 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IM40_00505 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IM40_00505 IPR002288 DNA gyrase B subunit, C-terminal IM40_00505 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IM40_00505 IPR018522 DNA topoisomerase, type IIA, conserved site IM40_00515 IPR016030 Cobalamin adenosyltransferase-like IM40_00515 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type IM40_00515 IPR036451 Cobalamin adenosyltransferase-like superfamily IM40_00560 IPR029001 Inosine triphosphate pyrophosphatase-like IM40_00560 IPR002637 Ham1-like protein IM40_00560 IPR020922 dITP/XTP pyrophosphatase IM40_00565 IPR023404 Radical SAM, alpha/beta horseshoe IM40_00565 IPR004559 Heme chaperone HemW-like IM40_00565 IPR006638 Elp3/MiaB/NifB IM40_00565 IPR034505 Anaerobic coproporphyrinogen-III oxidase IM40_00565 IPR007197 Radical SAM IM40_00565 IPR010723 HemN, C-terminal IM40_00570 IPR020891 Uncharacterised protein family UPF0758, conserved site IM40_00570 IPR001405 Uncharacterised protein family UPF0758 IM40_00570 IPR010994 RuvA domain 2-like IM40_00570 IPR025657 RadC-like JAB domain IM40_00570 IPR037518 MPN domain IM40_00575 IPR001633 EAL domain IM40_00575 IPR029016 GAF-like domain superfamily IM40_00575 IPR016132 Phytochrome chromophore attachment domain IM40_00575 IPR035919 EAL domain superfamily IM40_00575 IPR003018 GAF domain IM40_00575 IPR000160 GGDEF domain IM40_00575 IPR029787 Nucleotide cyclase IM40_00575 IPR013515 Phytochrome, central region IM40_00575 IPR001294 Phytochrome IM40_00585 IPR000883 Cytochrome c oxidase subunit I IM40_00585 IPR036927 Cytochrome c oxidase-like, subunit I superfamily IM40_00585 IPR023616 Cytochrome c oxidase-like, subunit I domain IM40_00585 IPR033944 Cytochrome c oxidase subunit I domain IM40_00585 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IM40_00585 IPR014241 Cytochrome c oxidase, subunit I bacterial type IM40_00590 IPR030470 UbiA prenyltransferase conserved site IM40_00590 IPR000537 UbiA prenyltransferase family IM40_00590 IPR006369 Protohaem IX farnesyltransferase IM40_00600 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily IM40_00600 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 IM40_00610 IPR004131 Pyrophosphate-energised proton pump IM40_00630 IPR002068 Alpha crystallin/Hsp20 domain IM40_00630 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain IM40_00630 IPR008978 HSP20-like chaperone IM40_00655 IPR002541 Cytochrome c assembly protein IM40_00655 IPR003557 Cytochrome c-type biogenesis protein CcmC IM40_00665 IPR004329 CcmE/CycJ protein IM40_00665 IPR036127 CcmE-like superfamily IM40_00675 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IM40_00680 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IM40_00680 IPR005864 ATP synthase, F0 complex, subunit b, bacterial IM40_00680 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily IM40_00685 IPR002379 V-ATPase proteolipid subunit C-like domain IM40_00685 IPR035921 F/V-ATP synthase subunit C superfamily IM40_00685 IPR038662 F1F0 ATP synthase subunit C superfamily IM40_00685 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site IM40_00685 IPR000454 ATP synthase, F0 complex, subunit C IM40_00690 IPR035908 ATP synthase, F0 complex, subunit A superfamily IM40_00690 IPR023011 ATP synthase, F0 complex, subunit A, active site IM40_00690 IPR000568 ATP synthase, F0 complex, subunit A IM40_00695 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 IM40_00695 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like IM40_00695 IPR018027 Asn/Gln amidotransferase IM40_00695 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic IM40_00695 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site IM40_00695 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IM40_00695 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit IM40_00695 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E IM40_00695 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 IM40_00700 IPR023631 Amidase signature domain IM40_00700 IPR036928 Amidase signature (AS) superfamily IM40_00700 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit IM40_00700 IPR020556 Amidase, conserved site IM40_00700 IPR000120 Amidase IM40_00705 IPR003837 Glu-tRNAGln amidotransferase C subunit IM40_00705 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C IM40_00710 IPR023576 UbiE/COQ5 methyltransferase, conserved site IM40_00710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00710 IPR004033 UbiE/COQ5 methyltransferase IM40_00715 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding IM40_00715 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site IM40_00715 IPR020629 Formamidopyrimidine-DNA glycosylase IM40_00715 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain IM40_00715 IPR035937 MutM-like, N-terminal IM40_00715 IPR010979 Ribosomal protein S13-like, H2TH IM40_00715 IPR010663 Zinc finger, FPG/IleRS-type IM40_00715 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type IM40_00765 IPR007127 RNA polymerase sigma factor 70, region 1.1 IM40_00765 IPR013325 RNA polymerase sigma factor, region 2 IM40_00765 IPR013324 RNA polymerase sigma factor, region 3/4-like IM40_00765 IPR012760 RNA polymerase sigma factor RpoD, C-terminal IM40_00765 IPR007631 RNA polymerase sigma factor 70, non-essential domain IM40_00765 IPR007630 RNA polymerase sigma-70 region 4 IM40_00765 IPR028630 RNA polymerase sigma factor RpoD IM40_00765 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_00765 IPR007624 RNA polymerase sigma-70 region 3 IM40_00765 IPR007627 RNA polymerase sigma-70 region 2 IM40_00765 IPR009042 RNA polymerase sigma-70 region 1.2 IM40_00765 IPR000943 RNA polymerase sigma-70 IM40_00765 IPR014284 RNA polymerase sigma-70 like domain IM40_00765 IPR042189 Sigma-70 factor, region 1.1 superfamily IM40_00775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00775 IPR010280 (Uracil-5)-methyltransferase family IM40_00775 IPR030390 RNA methyltransferase TrmA, active site IM40_00775 IPR012340 Nucleic acid-binding, OB-fold IM40_00780 IPR018753 Azospirillum phage Cd, Gp10 IM40_00805 IPR003423 Outer membrane efflux protein IM40_00805 IPR010130 Type I secretion outer membrane protein, TolC IM40_00825 IPR000160 GGDEF domain IM40_00825 IPR005330 MHYT domain IM40_00825 IPR001633 EAL domain IM40_00825 IPR029787 Nucleotide cyclase IM40_00825 IPR035919 EAL domain superfamily IM40_00840 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IM40_00840 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IM40_00840 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IM40_00840 IPR016039 Thiolase-like IM40_00855 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IM40_00855 IPR002504 NAD kinase IM40_00855 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IM40_00855 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal IM40_00860 IPR006127 Periplasmic solute binding protein, ZnuA-like IM40_00860 IPR035520 High-affinity zinc uptake system protein ZnuA IM40_00900 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 IM40_00900 IPR011701 Major facilitator superfamily IM40_00900 IPR020846 Major facilitator superfamily domain IM40_00900 IPR036259 MFS transporter superfamily IM40_00915 IPR015507 Ribosomal RNA large subunit methyltransferase E IM40_00915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00915 IPR002877 Ribosomal RNA methyltransferase FtsJ domain IM40_00920 IPR004573 rRNA small subunit methyltransferase B IM40_00920 IPR023267 RNA (C5-cytosine) methyltransferase IM40_00920 IPR006027 NusB/RsmB/TIM44 IM40_00920 IPR035926 NusB-like superfamily IM40_00920 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type IM40_00920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00920 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IM40_00925 IPR014762 DNA mismatch repair, conserved site IM40_00925 IPR020667 DNA mismatch repair protein, MutL IM40_00925 IPR002099 DNA mismatch repair protein family, N-terminal IM40_00925 IPR042120 MutL, C-terminal domain, dimerisation subdomain IM40_00925 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00925 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms IM40_00925 IPR042121 MutL, C-terminal domain, regulatory subdomain IM40_00925 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00925 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00925 IPR013507 DNA mismatch repair protein, S5 domain 2-like IM40_00925 IPR037198 MutL, C-terminal domain superfamily IM40_00925 IPR014790 MutL, C-terminal, dimerisation IM40_00930 IPR035482 Phosphoglucose isomerase, SIS domain 2 IM40_00930 IPR001672 Phosphoglucose isomerase (PGI) IM40_00930 IPR018189 Phosphoglucose isomerase, conserved site IM40_00930 IPR035476 Phosphoglucose isomerase, SIS domain 1 IM40_00935 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IM40_00935 IPR007863 Peptidase M16, C-terminal IM40_00955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_00955 IPR002301 Isoleucine-tRNA ligase IM40_00955 IPR023585 Isoleucine-tRNA ligase, type 1 IM40_00955 IPR010663 Zinc finger, FPG/IleRS-type IM40_00955 IPR002300 Aminoacyl-tRNA synthetase, class Ia IM40_00955 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain IM40_00955 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IM40_00955 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_00955 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IM40_00955 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IM40_00960 IPR006359 Transcription elongation factor GreA IM40_00960 IPR023459 Transcription elongation factor GreA/GreB family IM40_00960 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IM40_00960 IPR018151 Transcription elongation factor, GreA/GreB, conserved site IM40_00960 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IM40_00960 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IM40_00960 IPR028624 Transcription elongation factor GreA/GreB IM40_00960 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IM40_00975 IPR005822 Ribosomal protein L13 IM40_00975 IPR005823 Ribosomal protein L13, bacterial-type IM40_00975 IPR036899 Ribosomal protein L13 superfamily IM40_00980 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00980 IPR000754 Ribosomal protein S9 IM40_00980 IPR023035 Ribosomal protein S9, bacterial/plastid IM40_00980 IPR020574 Ribosomal protein S9, conserved site IM40_00980 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_01010 IPR002933 Peptidase M20 IM40_01010 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria IM40_01010 IPR036264 Bacterial exopeptidase dimerisation domain IM40_01010 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IM40_01010 IPR011650 Peptidase M20, dimerisation domain IM40_01015 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily IM40_01015 IPR018357 Hexapeptide transferase, conserved site IM40_01015 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 IM40_01015 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family IM40_01015 IPR001451 Hexapeptide repeat IM40_01015 IPR011004 Trimeric LpxA-like superfamily IM40_01025 IPR023382 Adenine nucleotide alpha hydrolase-like domains IM40_01025 IPR004506 tRNA-specific 2-thiouridylase IM40_01025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_01040 IPR004477 ComEC/Rec2-related protein IM40_01040 IPR035681 ComA-like, MBL domain IM40_01040 IPR025405 Domain of unknown function DUF4131 IM40_01040 IPR001279 Metallo-beta-lactamase IM40_01040 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_01040 IPR004797 Competence protein ComEC/Rec2 IM40_01055 IPR036397 Ribonuclease H superfamily IM40_01055 IPR012337 Ribonuclease H-like superfamily IM40_01055 IPR001584 Integrase, catalytic core IM40_01055 IPR032874 DDE domain IM40_01095 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily IM40_01095 IPR001260 Coproporphyrinogen III oxidase, aerobic IM40_01095 IPR018375 Coproporphyrinogen III oxidase, conserved site IM40_01100 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_01100 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase IM40_01100 IPR001537 tRNA/rRNA methyltransferase, SpoU type IM40_01100 IPR029028 Alpha/beta knot methyltransferases IM40_01110 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IM40_01110 IPR002668 Concentrative nucleoside transporter N-terminal domain IM40_01110 IPR011657 Concentrative nucleoside transporter C-terminal domain IM40_01110 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial IM40_01110 IPR008276 Concentrative nucleoside transporter IM40_01120 IPR009056 Cytochrome c-like domain IM40_01120 IPR002327 Cytochrome c, class IA/ IB IM40_01120 IPR036909 Cytochrome c-like domain superfamily IM40_01125 IPR039424 Solute-binding protein family 5 IM40_01125 IPR000914 Solute-binding protein family 5 domain IM40_01125 IPR030678 Peptide/nickel binding protein, MppA-type IM40_01130 IPR035906 MetI-like superfamily IM40_01130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IM40_01135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IM40_01135 IPR035906 MetI-like superfamily IM40_01135 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IM40_01140 IPR003593 AAA+ ATPase domain IM40_01140 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01140 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IM40_01140 IPR017871 ABC transporter, conserved site IM40_01140 IPR003439 ABC transporter-like IM40_01145 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_01145 IPR001227 Acyl transferase domain superfamily IM40_01145 IPR024925 Malonyl CoA-acyl carrier protein transacylase IM40_01145 IPR014043 Acyl transferase IM40_01145 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type IM40_01145 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IM40_01150 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IM40_01150 IPR036291 NAD(P)-binding domain superfamily IM40_01150 IPR020904 Short-chain dehydrogenase/reductase, conserved site IM40_01150 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01155 IPR006162 Phosphopantetheine attachment site IM40_01155 IPR009081 Phosphopantetheine binding ACP domain IM40_01155 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IM40_01155 IPR003231 Acyl carrier protein (ACP) IM40_01155 IPR036736 ACP-like superfamily IM40_01160 IPR014030 Beta-ketoacyl synthase, N-terminal IM40_01160 IPR016039 Thiolase-like IM40_01160 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IM40_01160 IPR000794 Beta-ketoacyl synthase IM40_01160 IPR018201 Beta-ketoacyl synthase, active site IM40_01160 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IM40_01160 IPR014031 Beta-ketoacyl synthase, C-terminal IM40_01165 IPR003770 Endolytic murein transglycosylase IM40_01180 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase IM40_01180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_01205 IPR007479 ISC system FeS cluster assembly, IscX IM40_01205 IPR036762 IscX-like superfamily IM40_01210 IPR036010 2Fe-2S ferredoxin-like superfamily IM40_01210 IPR018298 Adrenodoxin, iron-sulphur binding site IM40_01210 IPR012675 Beta-grasp domain superfamily IM40_01210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IM40_01210 IPR001055 Adrenodoxin IM40_01215 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily IM40_01215 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal IM40_01215 IPR006050 DNA photolyase, N-terminal IM40_01215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_01215 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily IM40_01215 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain IM40_01215 IPR002081 Cryptochrome/DNA photolyase class 1 IM40_01235 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase IM40_01235 IPR000462 CDP-alcohol phosphatidyltransferase IM40_01235 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial IM40_01245 IPR034907 Nucleoside diphosphate kinase-like domain IM40_01245 IPR036850 Nucleoside diphosphate kinase-like domain superfamily IM40_01245 IPR001564 Nucleoside diphosphate kinase IM40_01245 IPR023005 Nucleoside diphosphate kinase, active site IM40_01250 IPR007459 DNA polymerase III chi subunit, HolC IM40_01250 IPR036768 DNA polymerase III subunit chi superfamily IM40_01255 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal IM40_01255 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B IM40_01255 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal IM40_01255 IPR023042 Peptidase M17, leucine aminopeptidase IM40_01260 IPR018264 Ribosomal protein L33, conserved site IM40_01260 IPR001705 Ribosomal protein L33 IM40_01260 IPR038584 Ribosomal protein L33 superfamily IM40_01260 IPR011332 Zinc-binding ribosomal protein IM40_01270 IPR005115 Uncharacterised domain UPF0126 IM40_01290 IPR036640 ABC transporter type 1, transmembrane domain superfamily IM40_01290 IPR017871 ABC transporter, conserved site IM40_01290 IPR039421 Type I protein exporter IM40_01290 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01290 IPR011527 ABC transporter type 1, transmembrane domain IM40_01290 IPR003593 AAA+ ATPase domain IM40_01290 IPR003439 ABC transporter-like IM40_01305 IPR003489 Ribosome hibernation promoting factor/RaiA IM40_01305 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily IM40_01305 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal IM40_01305 IPR036567 Ribosome hibernation promotion factor-like IM40_01305 IPR034694 Ribosome hibernation promoting factor, long/plastid IM40_01310 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site IM40_01310 IPR000109 Proton-dependent oligopeptide transporter family IM40_01310 IPR005279 Dipeptide/tripeptide permease IM40_01310 IPR036259 MFS transporter superfamily IM40_01310 IPR020846 Major facilitator superfamily domain IM40_01320 IPR003593 AAA+ ATPase domain IM40_01320 IPR032781 ABC-transporter extension domain IM40_01320 IPR003439 ABC transporter-like IM40_01320 IPR017871 ABC transporter, conserved site IM40_01320 IPR022374 Energy-dependent translational throttle protein EttA IM40_01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01350 IPR000544 Octanoyltransferase IM40_01350 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IM40_01350 IPR020605 Octanoyltransferase, conserved site IM40_01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01355 IPR013765 DNA recombination and repair protein RecA IM40_01355 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IM40_01355 IPR020584 DNA recombination/repair protein RecA, conserved site IM40_01355 IPR003593 AAA+ ATPase domain IM40_01355 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface IM40_01355 IPR023400 DNA recombination and repair protein RecA, C-terminal IM40_01370 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily IM40_01370 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain IM40_01370 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IM40_01370 IPR003156 DHHA1 domain IM40_01370 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IM40_01370 IPR009000 Translation protein, beta-barrel domain superfamily IM40_01370 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IM40_01370 IPR002318 Alanine-tRNA ligase, class IIc IM40_01370 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria IM40_01380 IPR036874 Carbonic anhydrase superfamily IM40_01380 IPR001765 Carbonic anhydrase IM40_01380 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site IM40_01390 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_01390 IPR006197 Peptidase S24, LexA-like IM40_01390 IPR036286 LexA/Signal peptidase-like superfamily IM40_01390 IPR039418 LexA-like IM40_01395 IPR002696 Putative membrane protein insertion efficiency factor IM40_01400 IPR019998 Membrane insertase YidC IM40_01400 IPR038221 YidC, periplasmic domain superfamily IM40_01400 IPR038210 Membrane insertase YidC, periplasmic domain IM40_01400 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 IM40_01400 IPR028053 Membrane insertase YidC, N-terminal IM40_01400 IPR028055 Membrane insertase YidC/Oxa1, C-terminal IM40_01405 IPR030393 EngB-type guanine nucleotide-binding (G) domain IM40_01405 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC IM40_01405 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01405 IPR006073 GTP binding domain IM40_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01460 IPR003593 AAA+ ATPase domain IM40_01460 IPR025199 DNA translocase FtsK, 4TM region IM40_01460 IPR003593 AAA+ ATPase domain IM40_01460 IPR041027 FtsK alpha domain IM40_01460 IPR002543 FtsK domain IM40_01460 IPR036390 Winged helix DNA-binding domain superfamily IM40_01460 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01460 IPR002543 FtsK domain IM40_01460 IPR041027 FtsK alpha domain IM40_01460 IPR036390 Winged helix DNA-binding domain superfamily IM40_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01460 IPR025199 DNA translocase FtsK, 4TM region IM40_01460 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01460 IPR018541 FtsK gamma domain IM40_01460 IPR018541 FtsK gamma domain IM40_01475 IPR036291 NAD(P)-binding domain superfamily IM40_01475 IPR001509 NAD-dependent epimerase/dehydratase IM40_01480 IPR020846 Major facilitator superfamily domain IM40_01480 IPR036259 MFS transporter superfamily IM40_01480 IPR000849 Sugar phosphate transporter IM40_01480 IPR011701 Major facilitator superfamily IM40_01495 IPR018369 Chaperonin GroES, conserved site IM40_01495 IPR037124 GroES chaperonin superfamily IM40_01495 IPR011032 GroES-like superfamily IM40_01495 IPR020818 GroES chaperonin family IM40_01500 IPR018370 Chaperonin Cpn60, conserved site IM40_01500 IPR001844 Chaperonin Cpn60 IM40_01500 IPR002423 Chaperonin Cpn60/TCP-1 family IM40_01500 IPR027409 GroEL-like apical domain superfamily IM40_01500 IPR027413 GroEL-like equatorial domain superfamily IM40_01500 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IM40_01550 IPR011051 RmlC-like cupin domain superfamily IM40_01550 IPR012093 Pirin IM40_01550 IPR014710 RmlC-like jelly roll fold IM40_01550 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain IM40_01550 IPR003829 Pirin, N-terminal domain IM40_01560 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain IM40_01560 IPR035451 Ada-like domain superfamily IM40_01560 IPR004026 Ada DNA repair, metal-binding IM40_01560 IPR016221 Bifunctional regulatory protein Ada IM40_01560 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IM40_01560 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IM40_01560 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily IM40_01560 IPR009057 Homeobox-like domain superfamily IM40_01560 IPR018060 DNA binding HTH domain, AraC-type IM40_01560 IPR018062 HTH domain AraC-type, conserved site IM40_01560 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site IM40_01560 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01575 IPR013216 Methyltransferase type 11 IM40_01575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_01575 IPR026669 Arsenite methyltransferase-like IM40_01625 IPR029054 dUTPase-like IM40_01625 IPR033704 dUTPase, trimeric IM40_01625 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase IM40_01625 IPR036157 dUTPase-like superfamily IM40_01675 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_01675 IPR003346 Transposase, IS116/IS110/IS902 IM40_01695 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein IM40_01695 IPR006059 Bacterial extracellular solute-binding protein IM40_01715 IPR020103 Pseudouridine synthase, catalytic domain superfamily IM40_01715 IPR001406 Pseudouridine synthase I, TruA IM40_01715 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain IM40_01715 IPR020095 Pseudouridine synthase I, TruA, C-terminal IM40_01720 IPR001555 Phosphoribosylglycinamide formyltransferase, active site IM40_01720 IPR005794 Methionyl-tRNA formyltransferase IM40_01720 IPR002376 Formyl transferase, N-terminal IM40_01720 IPR036477 Formyl transferase, N-terminal domain superfamily IM40_01720 IPR011034 Formyl transferase-like, C-terminal domain superfamily IM40_01720 IPR005793 Formyl transferase, C-terminal IM40_01720 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain IM40_01720 IPR037022 Formyl transferase, C-terminal domain superfamily IM40_01725 IPR036821 Peptide deformylase superfamily IM40_01725 IPR023635 Peptide deformylase IM40_01740 IPR000223 Peptidase S26A, signal peptidase I IM40_01740 IPR019533 Peptidase S26 IM40_01740 IPR019757 Peptidase S26A, signal peptidase I, lysine active site IM40_01740 IPR036286 LexA/Signal peptidase-like superfamily IM40_01740 IPR019758 Peptidase S26A, signal peptidase I, conserved site IM40_01745 IPR036389 Ribonuclease III, endonuclease domain superfamily IM40_01745 IPR000999 Ribonuclease III domain IM40_01745 IPR011907 Ribonuclease III IM40_01745 IPR014720 Double-stranded RNA-binding domain IM40_01750 IPR005225 Small GTP-binding protein domain IM40_01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01750 IPR009019 K homology domain superfamily, prokaryotic type IM40_01750 IPR004044 K Homology domain, type 2 IM40_01750 IPR006073 GTP binding domain IM40_01750 IPR015946 K homology domain-like, alpha/beta IM40_01750 IPR030388 Era-type guanine nucleotide-binding (G) domain IM40_01750 IPR005662 GTP-binding protein Era IM40_01785 IPR004368 Translation initiation factor IF-1 IM40_01785 IPR006196 RNA-binding domain, S1, IF1 type IM40_01785 IPR012340 Nucleic acid-binding, OB-fold IM40_01795 IPR003029 S1 domain IM40_01795 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G IM40_01795 IPR004659 Ribonuclease E/G IM40_01795 IPR022967 RNA-binding domain, S1 IM40_01795 IPR012340 Nucleic acid-binding, OB-fold IM40_01800 IPR013088 Zinc finger, NHR/GATA-type IM40_01800 IPR005584 DNA gyrase inhibitor YacG IM40_01805 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01805 IPR036291 NAD(P)-binding domain superfamily IM40_01805 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) IM40_01810 IPR029045 ClpP/crotonase-like domain superfamily IM40_01810 IPR002142 Peptidase S49 IM40_01810 IPR004634 Peptidase S49, protease IV IM40_01810 IPR004635 Peptidase S49, SppA IM40_01815 IPR040978 Hypothetical protein TT1725 IM40_01815 IPR024084 Isopropylmalate dehydrogenase-like domain IM40_01815 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IM40_01840 IPR036429 SpoA-like superfamily IM40_01840 IPR001543 Surface presentation of antigen (SpoA) IM40_01840 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb IM40_01840 IPR012826 Flagellar motor switch FliN IM40_01845 IPR003593 AAA+ ATPase domain IM40_01845 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IM40_01845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01845 IPR020006 Flagellar biosynthesis protein FlhF IM40_01855 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IM40_01855 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IM40_01855 IPR005841 Alpha-D-phosphohexomutase superfamily IM40_01855 IPR006352 Phosphoglucosamine mutase, bacterial type IM40_01855 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IM40_01855 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IM40_01855 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IM40_01855 IPR016066 Alpha-D-phosphohexomutase, conserved site IM40_01855 IPR005843 Alpha-D-phosphohexomutase, C-terminal IM40_01880 IPR014748 Enoyl-CoA hydratase, C-terminal IM40_01880 IPR001753 Enoyl-CoA hydratase/isomerase IM40_01880 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IM40_01880 IPR029045 ClpP/crotonase-like domain superfamily IM40_01885 IPR005118 Transcription-repair-coupling factor, C-terminal domain IM40_01885 IPR003711 CarD-like/TRCF domain IM40_01885 IPR041471 UvrB, interaction domain IM40_01885 IPR014001 Helicase superfamily 1/2, ATP-binding domain IM40_01885 IPR001650 Helicase, C-terminal IM40_01885 IPR004576 Transcription-repair coupling factor IM40_01885 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01885 IPR037235 TRCF-like, C-terminal domain IM40_01885 IPR036101 CarD-like/TRCF domain superfamily IM40_01885 IPR011545 DEAD/DEAH box helicase domain IM40_01895 IPR000620 EamA domain IM40_01960 IPR030802 ABC transporter permease MalE IM40_01960 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IM40_01965 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl IM40_01965 IPR003593 AAA+ ATPase domain IM40_01965 IPR003439 ABC transporter-like IM40_01965 IPR017871 ABC transporter, conserved site IM40_01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01980 IPR006214 Bax inhibitor 1-related IM40_01995 IPR006032 Ribosomal protein S12/S23 IM40_01995 IPR005679 Ribosomal protein S12, bacterial-type IM40_01995 IPR012340 Nucleic acid-binding, OB-fold IM40_02000 IPR036823 Ribosomal protein S7 domain superfamily IM40_02000 IPR023798 Ribosomal protein S7 domain IM40_02000 IPR020606 Ribosomal protein S7, conserved site IM40_02000 IPR005717 Ribosomal protein S7, bacterial/organellar-type IM40_02000 IPR000235 Ribosomal protein S5/S7 IM40_02005 IPR041095 Elongation Factor G, domain II IM40_02005 IPR009022 Elongation factor G, domain III IM40_02005 IPR004540 Translation elongation factor EFG/EF2 IM40_02005 IPR035649 EFG, domain V IM40_02005 IPR000640 Elongation factor EFG, domain V-like IM40_02005 IPR009000 Translation protein, beta-barrel domain superfamily IM40_02005 IPR035647 EF-G domain III/V-like IM40_02005 IPR004161 Translation elongation factor EFTu-like, domain 2 IM40_02005 IPR031157 Tr-type G domain, conserved site IM40_02005 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02005 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_02005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_02005 IPR005225 Small GTP-binding protein domain IM40_02005 IPR005517 Translation elongation factor EFG/EF2, domain IV IM40_02005 IPR000795 Transcription factor, GTP-binding domain IM40_02010 IPR004161 Translation elongation factor EFTu-like, domain 2 IM40_02010 IPR005225 Small GTP-binding protein domain IM40_02010 IPR033720 Elongation factor Tu, domain 2 IM40_02010 IPR031157 Tr-type G domain, conserved site IM40_02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02010 IPR009000 Translation protein, beta-barrel domain superfamily IM40_02010 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IM40_02010 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IM40_02010 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IM40_02010 IPR000795 Transcription factor, GTP-binding domain IM40_02010 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IM40_02015 IPR001848 Ribosomal protein S10 IM40_02015 IPR036838 Ribosomal protein S10 domain superfamily IM40_02015 IPR027486 Ribosomal protein S10 domain IM40_02020 IPR019927 Ribosomal protein L3, bacterial/organelle-type IM40_02020 IPR009000 Translation protein, beta-barrel domain superfamily IM40_02020 IPR000597 Ribosomal protein L3 IM40_02020 IPR019926 Ribosomal protein L3, conserved site IM40_02025 IPR013005 50S ribosomal protein uL4 IM40_02025 IPR023574 Ribosomal protein L4 domain superfamily IM40_02025 IPR002136 Ribosomal protein L4/L1e IM40_02030 IPR001014 Ribosomal protein L23/L25, conserved site IM40_02030 IPR013025 Ribosomal protein L25/L23 IM40_02030 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IM40_02030 IPR012678 Ribosomal protein L23/L15e core domain superfamily IM40_02035 IPR008991 Translation protein SH3-like domain superfamily IM40_02035 IPR014726 Ribosomal protein L2, domain 3 IM40_02035 IPR022671 Ribosomal protein L2, conserved site IM40_02035 IPR022669 Ribosomal protein L2, C-terminal IM40_02035 IPR005880 Ribosomal protein L2, bacterial/organellar-type IM40_02035 IPR012340 Nucleic acid-binding, OB-fold IM40_02035 IPR022666 Ribosomal Proteins L2, RNA binding domain IM40_02035 IPR014722 Ribosomal protein L2, domain 2 IM40_02035 IPR002171 Ribosomal protein L2 IM40_02040 IPR023575 Ribosomal protein S19, superfamily IM40_02040 IPR005732 Ribosomal protein S19, bacterial-type IM40_02040 IPR020934 Ribosomal protein S19 conserved site IM40_02040 IPR002222 Ribosomal protein S19/S15 IM40_02045 IPR036394 Ribosomal protein L22/L17 superfamily IM40_02045 IPR001063 Ribosomal protein L22/L17 IM40_02045 IPR018260 Ribosomal protein L22/L17, conserved site IM40_02045 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type IM40_02050 IPR036419 Ribosomal protein S3, C-terminal domain superfamily IM40_02050 IPR001351 Ribosomal protein S3, C-terminal IM40_02050 IPR005704 Ribosomal protein S3, bacterial-type IM40_02050 IPR004044 K Homology domain, type 2 IM40_02050 IPR015946 K homology domain-like, alpha/beta IM40_02050 IPR004087 K Homology domain IM40_02050 IPR018280 Ribosomal protein S3, conserved site IM40_02050 IPR009019 K homology domain superfamily, prokaryotic type IM40_02055 IPR020798 Ribosomal protein L16, conserved site IM40_02055 IPR016180 Ribosomal protein L10e/L16 IM40_02055 IPR000114 Ribosomal protein L16 IM40_02055 IPR036920 Ribosomal protein L10e/L16 superfamily IM40_02060 IPR036049 Ribosomal protein L29/L35 superfamily IM40_02060 IPR001854 Ribosomal protein L29/L35 IM40_02065 IPR019984 30S ribosomal protein S17 IM40_02065 IPR000266 Ribosomal protein S17/S11 IM40_02065 IPR012340 Nucleic acid-binding, OB-fold IM40_02070 IPR019972 Ribosomal protein L14P, conserved site IM40_02070 IPR000218 Ribosomal protein L14P IM40_02070 IPR036853 Ribosomal protein L14 superfamily IM40_02070 IPR005745 Ribosomal protein L14P, bacterial-type IM40_02075 IPR005824 KOW IM40_02075 IPR041988 Ribosomal Protein L26/L24, KOW domain IM40_02075 IPR008991 Translation protein SH3-like domain superfamily IM40_02075 IPR005825 Ribosomal protein L24/L26, conserved site IM40_02075 IPR003256 Ribosomal protein L24 IM40_02075 IPR014722 Ribosomal protein L2, domain 2 IM40_02080 IPR031310 Ribosomal protein L5, N-terminal IM40_02080 IPR002132 Ribosomal protein L5 IM40_02080 IPR020930 Ribosomal protein L5, bacterial-type IM40_02080 IPR020929 Ribosomal protein L5, conserved site IM40_02080 IPR022803 Ribosomal protein L5 domain superfamily IM40_02080 IPR031309 Ribosomal protein L5, C-terminal IM40_02085 IPR023036 Ribosomal protein S14, bacterial/plastid IM40_02085 IPR018271 Ribosomal protein S14, conserved site IM40_02085 IPR001209 Ribosomal protein S14 IM40_02090 IPR035987 Ribosomal protein S8 superfamily IM40_02090 IPR000630 Ribosomal protein S8 IM40_02095 IPR000702 Ribosomal protein L6 IM40_02095 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily IM40_02095 IPR020040 Ribosomal protein L6, alpha-beta domain IM40_02095 IPR019906 Ribosomal protein L6, bacterial-type IM40_02095 IPR002358 Ribosomal protein L6, conserved site IM40_02100 IPR005484 Ribosomal protein L18 IM40_02100 IPR004389 Ribosomal protein L18, bacterial-type IM40_02105 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_02105 IPR005324 Ribosomal protein S5, C-terminal IM40_02105 IPR005712 Ribosomal protein S5, bacterial-type IM40_02105 IPR000851 Ribosomal protein S5 IM40_02105 IPR018192 Ribosomal protein S5, N-terminal, conserved site IM40_02105 IPR013810 Ribosomal protein S5, N-terminal IM40_02105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_02110 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IM40_02110 IPR005996 Ribosomal protein L30, bacterial-type IM40_02110 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IM40_02115 IPR030878 Ribosomal protein L15 IM40_02115 IPR021131 Ribosomal protein L18e/L15P IM40_02115 IPR036227 Ribosomal L18e/L15P superfamily IM40_02115 IPR001196 Ribosomal protein L15, conserved site IM40_02115 IPR005749 Ribosomal protein L15, bacterial-type IM40_02120 IPR030659 SecY conserved site IM40_02120 IPR026593 Protein translocase subunit SecY IM40_02120 IPR002208 SecY/SEC61-alpha family IM40_02120 IPR023201 SecY domain superfamily IM40_02125 IPR006259 Adenylate kinase subfamily IM40_02125 IPR000850 Adenylate kinase/UMP-CMP kinase IM40_02125 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02125 IPR036193 Adenylate kinase, active site lid domain superfamily IM40_02125 IPR007862 Adenylate kinase, active site lid domain IM40_02125 IPR033690 Adenylate kinase, conserved site IM40_02130 IPR019980 Ribosomal protein S13, bacterial-type IM40_02130 IPR018269 Ribosomal protein S13, conserved site IM40_02130 IPR001892 Ribosomal protein S13 IM40_02130 IPR027437 30s ribosomal protein S13, C-terminal IM40_02130 IPR010979 Ribosomal protein S13-like, H2TH IM40_02135 IPR036967 Ribosomal protein S11 superfamily IM40_02135 IPR018102 Ribosomal S11, conserved site IM40_02135 IPR001971 Ribosomal protein S11 IM40_02135 IPR019981 Ribosomal protein S11, bacterial-type IM40_02140 IPR011773 DNA-directed RNA polymerase, alpha subunit IM40_02140 IPR036603 RNA polymerase, RBP11-like subunit IM40_02140 IPR011260 RNA polymerase, alpha subunit, C-terminal IM40_02140 IPR036643 DNA-directed RNA polymerase, insert domain superfamily IM40_02140 IPR011262 DNA-directed RNA polymerase, insert domain IM40_02140 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type IM40_02145 IPR036373 Ribosomal protein L17 superfamily IM40_02145 IPR000456 Ribosomal protein L17 IM40_02150 IPR036034 PDZ superfamily IM40_02150 IPR041489 PDZ domain 6 IM40_02150 IPR001940 Peptidase S1C IM40_02150 IPR009003 Peptidase S1, PA clan IM40_02150 IPR011782 Peptidase S1C, Do IM40_02150 IPR001478 PDZ domain IM40_02155 IPR021886 MgsA AAA+ ATPase C-terminal IM40_02155 IPR003959 ATPase, AAA-type, core IM40_02155 IPR003593 AAA+ ATPase domain IM40_02155 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IM40_02155 IPR032423 AAA C-terminal domain IM40_02155 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02165 IPR010093 SinI-like, DNA-binding domain IM40_02165 IPR003812 Fido domain IM40_02165 IPR036597 Fido-like domain superfamily IM40_02165 IPR040198 Fido domain-containing protein IM40_02165 IPR041657 Helix-turn-helix domain, group 17 IM40_02180 IPR005119 LysR, substrate-binding IM40_02180 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_02180 IPR036390 Winged helix DNA-binding domain superfamily IM40_02180 IPR000847 Transcription regulator HTH, LysR IM40_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02205 IPR005053 MobA/MobL protein IM40_02205 IPR041533 Bartonella effector protein, BID domain IM40_02205 IPR027351 (+) RNA virus helicase core domain IM40_02205 IPR014136 Ti-type conjugative transfer relaxase TraA IM40_02280 IPR009649 TraU IM40_02370 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_02370 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_02385 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_02385 IPR001279 Metallo-beta-lactamase IM40_02385 IPR041141 Diiron non-heme beta-hydroxylase, N-terminal domain IM40_02390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02390 IPR004033 UbiE/COQ5 methyltransferase IM40_02390 IPR023576 UbiE/COQ5 methyltransferase, conserved site IM40_02410 IPR001242 Condensation domain IM40_02410 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IM40_02410 IPR020845 AMP-binding, conserved site IM40_02410 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02410 IPR009081 Phosphopantetheine binding ACP domain IM40_02410 IPR042099 AMP-dependent synthetase-like superfamily IM40_02410 IPR006162 Phosphopantetheine attachment site IM40_02410 IPR001031 Thioesterase IM40_02410 IPR036736 ACP-like superfamily IM40_02410 IPR029058 Alpha/Beta hydrolase fold IM40_02410 IPR010071 Amino acid adenylation domain IM40_02410 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IM40_02410 IPR000873 AMP-dependent synthetase/ligase IM40_02415 IPR010071 Amino acid adenylation domain IM40_02415 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IM40_02415 IPR036736 ACP-like superfamily IM40_02415 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02415 IPR020845 AMP-binding, conserved site IM40_02415 IPR006162 Phosphopantetheine attachment site IM40_02415 IPR042099 AMP-dependent synthetase-like superfamily IM40_02415 IPR009081 Phosphopantetheine binding ACP domain IM40_02415 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IM40_02415 IPR010060 Non-ribosomal peptide synthase IM40_02415 IPR001242 Condensation domain IM40_02415 IPR000873 AMP-dependent synthetase/ligase IM40_02420 IPR010060 Non-ribosomal peptide synthase IM40_02420 IPR006162 Phosphopantetheine attachment site IM40_02420 IPR009081 Phosphopantetheine binding ACP domain IM40_02420 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IM40_02420 IPR001242 Condensation domain IM40_02420 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IM40_02420 IPR042099 AMP-dependent synthetase-like superfamily IM40_02420 IPR000873 AMP-dependent synthetase/ligase IM40_02420 IPR010071 Amino acid adenylation domain IM40_02420 IPR020845 AMP-binding, conserved site IM40_02420 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02420 IPR036736 ACP-like superfamily IM40_02450 IPR001533 Pterin 4 alpha carbinolamine dehydratase IM40_02450 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily IM40_02500 IPR002514 Transposase IS3/IS911family IM40_02500 IPR009057 Homeobox-like domain superfamily IM40_02505 IPR042099 AMP-dependent synthetase-like superfamily IM40_02505 IPR000873 AMP-dependent synthetase/ligase IM40_02505 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IM40_02505 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02505 IPR020845 AMP-binding, conserved site IM40_02505 IPR001242 Condensation domain IM40_02505 IPR010071 Amino acid adenylation domain IM40_02505 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IM40_02505 IPR009081 Phosphopantetheine binding ACP domain IM40_02505 IPR006162 Phosphopantetheine attachment site IM40_02505 IPR036736 ACP-like superfamily IM40_02505 IPR010060 Non-ribosomal peptide synthase IM40_02515 IPR036286 LexA/Signal peptidase-like superfamily IM40_02515 IPR019758 Peptidase S26A, signal peptidase I, conserved site IM40_02515 IPR019757 Peptidase S26A, signal peptidase I, lysine active site IM40_02515 IPR000223 Peptidase S26A, signal peptidase I IM40_02515 IPR019533 Peptidase S26 IM40_02580 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site IM40_02580 IPR000109 Proton-dependent oligopeptide transporter family IM40_02580 IPR036259 MFS transporter superfamily IM40_02580 IPR005279 Dipeptide/tripeptide permease IM40_02580 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B IM40_02585 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IM40_02585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_02585 IPR008909 DALR anticodon binding IM40_02585 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily IM40_02585 IPR005148 Arginyl tRNA synthetase N-terminal domain IM40_02585 IPR001278 Arginine-tRNA ligase IM40_02585 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_02585 IPR035684 Arginyl-tRNA synthetase, catalytic core domain IM40_02680 IPR003333 Mycolic acid cyclopropane synthase IM40_02680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02805 IPR035644 MraZ, C-terminal IM40_02805 IPR035642 MraZ, N-terminal IM40_02805 IPR020603 MraZ domain IM40_02805 IPR003444 Transcriptional regulator MraZ IM40_02805 IPR037914 SpoVT-AbrB domain superfamily IM40_02805 IPR007159 SpoVT-AbrB domain IM40_02805 IPR038619 MraZ superfamily IM40_02810 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IM40_02810 IPR002903 Ribosomal RNA small subunit methyltransferase H IM40_02810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02825 IPR036565 Mur-like, catalytic domain superfamily IM40_02825 IPR035911 MurE/MurF, N-terminal IM40_02825 IPR004101 Mur ligase, C-terminal IM40_02825 IPR036615 Mur ligase, C-terminal domain superfamily IM40_02825 IPR000713 Mur ligase, N-terminal catalytic domain IM40_02825 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase IM40_02825 IPR013221 Mur ligase, central IM40_02830 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase IM40_02830 IPR035911 MurE/MurF, N-terminal IM40_02830 IPR000713 Mur ligase, N-terminal catalytic domain IM40_02830 IPR013221 Mur ligase, central IM40_02830 IPR036615 Mur ligase, C-terminal domain superfamily IM40_02830 IPR004101 Mur ligase, C-terminal IM40_02830 IPR036565 Mur-like, catalytic domain superfamily IM40_02835 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site IM40_02835 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase IM40_02835 IPR000715 Glycosyl transferase, family 4 IM40_02840 IPR036565 Mur-like, catalytic domain superfamily IM40_02840 IPR036615 Mur ligase, C-terminal domain superfamily IM40_02840 IPR013221 Mur ligase, central IM40_02840 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase IM40_02840 IPR018109 Folylpolyglutamate synthetase, conserved site IM40_02845 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IM40_02845 IPR013437 Probable peptidoglycan glycosyltransferase FtsW IM40_02850 IPR006009 N-acetylglucosaminyltransferase, MurG IM40_02850 IPR007235 Glycosyl transferase, family 28, C-terminal IM40_02850 IPR004276 Glycosyltransferase family 28, N-terminal domain IM40_02855 IPR036615 Mur ligase, C-terminal domain superfamily IM40_02855 IPR013221 Mur ligase, central IM40_02855 IPR000713 Mur ligase, N-terminal catalytic domain IM40_02855 IPR005758 UDP-N-acetylmuramate--L-alanine ligase IM40_02855 IPR004101 Mur ligase, C-terminal IM40_02855 IPR036565 Mur-like, catalytic domain superfamily IM40_02860 IPR006094 FAD linked oxidase, N-terminal IM40_02860 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily IM40_02860 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal IM40_02860 IPR036318 FAD-binding, type PCMH-like superfamily IM40_02860 IPR016167 FAD-binding, type PCMH, subdomain 1 IM40_02860 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase IM40_02860 IPR016166 FAD-binding domain, PCMH-type IM40_02860 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_02865 IPR011095 D-alanine--D-alanine ligase, C-terminal IM40_02865 IPR016185 Pre-ATP-grasp domain superfamily IM40_02865 IPR013815 ATP-grasp fold, subdomain 1 IM40_02865 IPR011127 D-alanine--D-alanine ligase, N-terminal domain IM40_02865 IPR011761 ATP-grasp fold IM40_02865 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site IM40_02865 IPR005905 D-alanine--D-alanine ligase IM40_02870 IPR013685 POTRA domain, FtsQ-type IM40_02870 IPR034746 POTRA domain IM40_02870 IPR005548 Cell division protein FtsQ/DivIB IM40_02870 IPR026579 Cell division protein FtsQ IM40_02875 IPR020823 Cell division protein FtsA IM40_02875 IPR003494 SHS2 domain inserted in FtsA IM40_02880 IPR024757 Cell division protein FtsZ, C-terminal IM40_02880 IPR003008 Tubulin/FtsZ, GTPase domain IM40_02880 IPR036525 Tubulin/FtsZ, GTPase domain superfamily IM40_02880 IPR020805 Cell division protein FtsZ, conserved site IM40_02880 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily IM40_02880 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IM40_02880 IPR000158 Cell division protein FtsZ IM40_02880 IPR008280 Tubulin/FtsZ, C-terminal IM40_02885 IPR016181 Acyl-CoA N-acyltransferase IM40_02885 IPR000182 GNAT domain IM40_02900 IPR030656 Delta-aminolevulinic acid dehydratase, active site IM40_02900 IPR013785 Aldolase-type TIM barrel IM40_02900 IPR001731 Delta-aminolevulinic acid dehydratase IM40_02920 IPR004667 ADP/ATP carrier protein IM40_02930 IPR001980 Phosphopantetheine adenylyltransferase IM40_02930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_02930 IPR004821 Cytidyltransferase-like domain IM40_02940 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IM40_02940 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IM40_02940 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IM40_02940 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IM40_02940 IPR005743 DNA gyrase, subunit A IM40_02940 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IM40_02940 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IM40_02945 IPR011344 Single-stranded DNA-binding protein IM40_02945 IPR000424 Primosome PriB/single-strand DNA-binding IM40_02945 IPR012340 Nucleic acid-binding, OB-fold IM40_02955 IPR000119 Histone-like DNA-binding protein IM40_02955 IPR020816 Histone-like DNA-binding protein, conserved site IM40_02955 IPR005684 Integration host factor, alpha subunit IM40_02955 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_02970 IPR006427 Phage portal protein, HK97 IM40_02970 IPR006944 Bacteriophage/Gene transfer agent portal protein IM40_03010 IPR025777 GMP synthetase ATP pyrophosphatase domain IM40_03010 IPR001674 GMP synthase, C-terminal IM40_03010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_03010 IPR000182 GNAT domain IM40_03010 IPR017926 Glutamine amidotransferase IM40_03010 IPR011257 DNA glycosylase IM40_03010 IPR029062 Class I glutamine amidotransferase-like IM40_03010 IPR005019 Methyladenine glycosylase IM40_03010 IPR016181 Acyl-CoA N-acyltransferase IM40_03015 IPR020557 Fumarate lyase, conserved site IM40_03015 IPR000362 Fumarate lyase family IM40_03015 IPR022761 Fumarate lyase, N-terminal IM40_03015 IPR008948 L-Aspartase-like IM40_03015 IPR018951 Fumarase C, C-terminal IM40_03015 IPR024083 Fumarase/histidase, N-terminal IM40_03015 IPR005677 Fumarate hydratase, class II IM40_03025 IPR002125 Cytidine and deoxycytidylate deaminase domain IM40_03025 IPR016192 APOBEC/CMP deaminase, zinc-binding IM40_03025 IPR028883 tRNA-specific adenosine deaminase IM40_03025 IPR016193 Cytidine deaminase-like IM40_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03030 IPR015854 ABC transporter, lipoprotein release, LolD IM40_03030 IPR017871 ABC transporter, conserved site IM40_03030 IPR003439 ABC transporter-like IM40_03030 IPR003593 AAA+ ATPase domain IM40_03035 IPR025857 MacB-like periplasmic core domain IM40_03035 IPR003838 ABC transporter permease protein domain IM40_03035 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E IM40_03040 IPR004154 Anticodon-binding IM40_03040 IPR002316 Proline-tRNA ligase, class IIa IM40_03040 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IM40_03040 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type IM40_03040 IPR023716 Proline-tRNA ligase, class IIa, type 2 IM40_03040 IPR033730 Prokaryote proline-tRNA ligase core domain IM40_03040 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_03040 IPR036621 Anticodon-binding domain superfamily IM40_03055 IPR023065 Uncharacterised protein family ApaG IM40_03055 IPR036767 ApaG domain superfamily IM40_03055 IPR007474 ApaG domain IM40_03060 IPR029069 HotDog domain superfamily IM40_03060 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family IM40_03060 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase IM40_03060 IPR006683 Thioesterase domain IM40_03060 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site IM40_03065 IPR014163 Tol-Pal system, TolQ IM40_03065 IPR002898 MotA/TolQ/ExbB proton channel IM40_03095 IPR011042 Six-bladed beta-propeller, TolB-like IM40_03095 IPR036752 TolB, N-terminal domain superfamily IM40_03095 IPR007195 TolB, N-terminal IM40_03095 IPR014167 Tol-Pal system protein TolB IM40_03095 IPR011659 WD40-like Beta Propeller IM40_03100 IPR006690 Outer membrane protein, OmpA-like, conserved site IM40_03100 IPR036737 OmpA-like domain superfamily IM40_03100 IPR039001 Peptidoglycan-associated lipoprotein IM40_03100 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal IM40_03100 IPR006664 Outer membrane protein, bacterial IM40_03100 IPR006665 OmpA-like domain IM40_03105 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily IM40_03105 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily IM40_03105 IPR019813 Translation initiation factor 3, conserved site IM40_03105 IPR001288 Translation initiation factor 3 IM40_03105 IPR019815 Translation initiation factor 3, C-terminal IM40_03105 IPR019814 Translation initiation factor 3, N-terminal IM40_03110 IPR012676 TGS-like IM40_03110 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IM40_03110 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_03110 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IM40_03110 IPR033728 Threonine-tRNA ligase catalytic core domain IM40_03110 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IM40_03110 IPR004154 Anticodon-binding IM40_03110 IPR036621 Anticodon-binding domain superfamily IM40_03110 IPR004095 TGS IM40_03110 IPR012675 Beta-grasp domain superfamily IM40_03110 IPR002320 Threonine-tRNA ligase, class IIa IM40_03130 IPR000652 Triosephosphate isomerase IM40_03130 IPR020861 Triosephosphate isomerase, active site IM40_03130 IPR013785 Aldolase-type TIM barrel IM40_03130 IPR035990 Triosephosphate isomerase superfamily IM40_03130 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic IM40_03145 IPR029062 Class I glutamine amidotransferase-like IM40_03145 IPR004468 CTP synthase IM40_03145 IPR017456 CTP synthase, N-terminal IM40_03145 IPR017926 Glutamine amidotransferase IM40_03145 IPR033828 CTP synthase GATase domain IM40_03145 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03150 IPR006269 3-deoxy-8-phosphooctulonate synthase IM40_03150 IPR006218 DAHP synthetase I/KDSA IM40_03150 IPR013785 Aldolase-type TIM barrel IM40_03180 IPR025110 AMP-binding enzyme, C-terminal domain IM40_03180 IPR020845 AMP-binding, conserved site IM40_03180 IPR011904 Acetate-CoA ligase IM40_03180 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain IM40_03180 IPR042099 AMP-dependent synthetase-like superfamily IM40_03180 IPR000873 AMP-dependent synthetase/ligase IM40_03185 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IM40_03185 IPR035980 Ribosomal protein S6 superfamily IM40_03185 IPR020814 Ribosomal protein S6, plastid/chloroplast IM40_03185 IPR000529 Ribosomal protein S6 IM40_03190 IPR001648 Ribosomal protein S18 IM40_03190 IPR018275 Ribosomal protein S18, conserved site IM40_03190 IPR036870 Ribosomal protein S18 superfamily IM40_03210 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily IM40_03210 IPR007692 DNA helicase, DnaB type IM40_03210 IPR007694 DNA helicase, DnaB-like, C-terminal IM40_03210 IPR007693 DNA helicase, DnaB-like, N-terminal IM40_03210 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IM40_03210 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03250 IPR033704 dUTPase, trimeric IM40_03250 IPR036157 dUTPase-like superfamily IM40_03250 IPR029054 dUTPase-like IM40_03250 IPR011962 dCTP deaminase IM40_03270 IPR007780 NAD-glutamate dehydrogenase, bacteria IM40_03270 IPR028971 NAD-glutamate dehydrogenase IM40_03270 IPR036291 NAD(P)-binding domain superfamily IM40_03275 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type IM40_03275 IPR005946 Ribose-phosphate pyrophosphokinase IM40_03275 IPR029057 Phosphoribosyltransferase-like IM40_03275 IPR000836 Phosphoribosyltransferase domain IM40_03275 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain IM40_03275 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site IM40_03295 IPR011910 ADP-heptose--LPS heptosyltransferase 2 IM40_03295 IPR002201 Glycosyl transferase, family 9 IM40_03300 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03300 IPR036390 Winged helix DNA-binding domain superfamily IM40_03300 IPR023187 Transcriptional regulator MarR-type, conserved site IM40_03300 IPR000835 MarR-type HTH domain IM40_03320 IPR003796 Ribonucleotide reductase regulator NrdR-like IM40_03320 IPR005144 ATP-cone domain IM40_03325 IPR015424 Pyridoxal phosphate-dependent transferase IM40_03325 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IM40_03325 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IM40_03325 IPR001085 Serine hydroxymethyltransferase IM40_03325 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site IM40_03325 IPR039429 Serine hydroxymethyltransferase-like domain IM40_03335 IPR003784 BioY protein IM40_03350 IPR001787 Ribosomal protein L21 IM40_03350 IPR028909 Ribosomal protein L21-like IM40_03350 IPR036164 L21-like superfamily IM40_03355 IPR001684 Ribosomal protein L27 IM40_03355 IPR018261 Ribosomal protein L27, conserved site IM40_03365 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IM40_03390 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03390 IPR023546 Methylated-DNA--protein-cysteine methyltransferase IM40_03390 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily IM40_03390 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain IM40_03390 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IM40_03390 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IM40_03390 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site IM40_03395 IPR000086 NUDIX hydrolase domain IM40_03395 IPR020084 NUDIX hydrolase, conserved site IM40_03395 IPR015797 NUDIX hydrolase-like domain superfamily IM40_03395 IPR022927 RNA pyrophosphohydrolase RppH IM40_03400 IPR029045 ClpP/crotonase-like domain superfamily IM40_03400 IPR005151 Tail specific protease IM40_03400 IPR004447 C-terminal-processing peptidase S41A IM40_03400 IPR036034 PDZ superfamily IM40_03400 IPR001478 PDZ domain IM40_03405 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent IM40_03405 IPR017850 Alkaline-phosphatase-like, core domain superfamily IM40_03405 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily IM40_03405 IPR006124 Metalloenzyme IM40_03405 IPR011258 BPG-independent PGAM, N-terminal IM40_03410 IPR011605 NusB antitermination factor IM40_03410 IPR035926 NusB-like superfamily IM40_03410 IPR006027 NusB/RsmB/TIM44 IM40_03425 IPR024706 Peroxiredoxin, AhpC-type IM40_03425 IPR036249 Thioredoxin-like superfamily IM40_03425 IPR013766 Thioredoxin domain IM40_03425 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IM40_03435 IPR004087 K Homology domain IM40_03435 IPR036345 Exoribonuclease, PH domain 2 superfamily IM40_03435 IPR015847 Exoribonuclease, phosphorolytic domain 2 IM40_03435 IPR036612 K Homology domain, type 1 superfamily IM40_03435 IPR004088 K Homology domain, type 1 IM40_03435 IPR012340 Nucleic acid-binding, OB-fold IM40_03435 IPR012162 Polyribonucleotide nucleotidyltransferase IM40_03435 IPR027408 PNPase/RNase PH domain superfamily IM40_03435 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain IM40_03435 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_03435 IPR003029 S1 domain IM40_03435 IPR022967 RNA-binding domain, S1 IM40_03435 IPR001247 Exoribonuclease, phosphorolytic domain 1 IM40_03440 IPR009068 S15/NS1, RNA-binding IM40_03440 IPR005290 Ribosomal protein S15, bacterial-type IM40_03440 IPR000589 Ribosomal protein S15 IM40_03445 IPR020103 Pseudouridine synthase, catalytic domain superfamily IM40_03445 IPR032819 tRNA pseudouridylate synthase B, C-terminal IM40_03445 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal IM40_03445 IPR014780 tRNA pseudouridine synthase II, TruB IM40_03445 IPR002501 Pseudouridine synthase II, N-terminal IM40_03525 IPR014017 UvrD-like DNA helicase, C-terminal IM40_03525 IPR000212 DNA helicase, UvrD/REP type IM40_03525 IPR034739 UvrD/AddA helicase, N-terminal IM40_03525 IPR005751 ATP-dependent DNA helicase PcrA IM40_03525 IPR014016 UvrD-like helicase, ATP-binding domain IM40_03525 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03525 IPR013986 DExx box DNA helicase domain superfamily IM40_03540 IPR005829 Sugar transporter, conserved site IM40_03540 IPR020846 Major facilitator superfamily domain IM40_03540 IPR036259 MFS transporter superfamily IM40_03540 IPR011701 Major facilitator superfamily IM40_03605 IPR000462 CDP-alcohol phosphatidyltransferase IM40_03605 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase IM40_03610 IPR001943 UVR domain IM40_03610 IPR036876 UVR domain superfamily IM40_03610 IPR004791 UvrABC system, subunit C IM40_03610 IPR000305 GIY-YIG endonuclease IM40_03610 IPR038476 UvrC homology region 2 superfamily IM40_03610 IPR010994 RuvA domain 2-like IM40_03610 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IM40_03610 IPR041663 DisA/LigA, helix-hairpin-helix motif IM40_03610 IPR001162 UvrC family homology region IM40_03610 IPR035901 GIY-YIG endonuclease superfamily IM40_03625 IPR020103 Pseudouridine synthase, catalytic domain superfamily IM40_03625 IPR006225 Pseudouridine synthase, RluC/RluD IM40_03625 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IM40_03625 IPR036986 RNA-binding S4 domain superfamily IM40_03625 IPR002942 RNA-binding S4 domain IM40_03625 IPR006145 Pseudouridine synthase, RsuA/RluA IM40_03630 IPR000943 RNA polymerase sigma-70 IM40_03630 IPR007630 RNA polymerase sigma-70 region 4 IM40_03630 IPR013324 RNA polymerase sigma factor, region 3/4-like IM40_03630 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria IM40_03630 IPR007627 RNA polymerase sigma-70 region 2 IM40_03630 IPR009042 RNA polymerase sigma-70 region 1.2 IM40_03630 IPR013325 RNA polymerase sigma factor, region 2 IM40_03630 IPR014284 RNA polymerase sigma-70 like domain IM40_03635 IPR004805 DNA polymerase III, alpha subunit IM40_03635 IPR016195 Polymerase/histidinol phosphatase-like IM40_03635 IPR003141 Polymerase/histidinol phosphatase, N-terminal IM40_03635 IPR004013 PHP domain IM40_03635 IPR029460 DNA polymerase, helix-hairpin-helix motif IM40_03635 IPR040982 DNA polymerase III alpha subunit finger domain IM40_03635 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain IM40_03635 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IM40_03640 IPR002502 N-acetylmuramoyl-L-alanine amidase domain IM40_03640 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily IM40_03645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_03645 IPR018762 Histidine phosphotransferase ChpT, C-terminal IM40_03650 IPR005122 Uracil-DNA glycosylase-like IM40_03650 IPR036895 Uracil-DNA glycosylase-like domain superfamily IM40_03655 IPR039653 Prenyltransferase IM40_03655 IPR006370 4-hydroxybenzoate polyprenyltransferase-like IM40_03655 IPR030470 UbiA prenyltransferase conserved site IM40_03655 IPR000537 UbiA prenyltransferase family IM40_03670 IPR001679 NAD-dependent DNA ligase IM40_03670 IPR013839 NAD-dependent DNA ligase, adenylation IM40_03670 IPR010994 RuvA domain 2-like IM40_03670 IPR004150 NAD-dependent DNA ligase, OB-fold IM40_03670 IPR012340 Nucleic acid-binding, OB-fold IM40_03670 IPR013840 NAD-dependent DNA ligase, N-terminal IM40_03670 IPR001357 BRCT domain IM40_03670 IPR036420 BRCT domain superfamily IM40_03670 IPR041663 DisA/LigA, helix-hairpin-helix motif IM40_03670 IPR033136 NAD-dependent DNA ligase, conserved site IM40_03670 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type IM40_03675 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03675 IPR004604 DNA recombination/repair protein RecN IM40_03675 IPR003395 RecF/RecN/SMC, N-terminal IM40_03680 IPR013026 Tetratricopeptide repeat-containing domain IM40_03680 IPR019734 Tetratricopeptide repeat IM40_03680 IPR039565 Outer membrane lipoprotein BamD-like IM40_03680 IPR017689 Outer membrane protein assembly factor BamD IM40_03680 IPR011990 Tetratricopeptide-like helical domain superfamily IM40_03685 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal IM40_03685 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase IM40_03685 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal IM40_03685 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_03700 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IM40_03700 IPR035979 RNA-binding domain superfamily IM40_03700 IPR000504 RNA recognition motif domain IM40_03740 IPR007211 Protein of unknown function DUF378 IM40_03775 IPR000119 Histone-like DNA-binding protein IM40_03775 IPR020816 Histone-like DNA-binding protein, conserved site IM40_03775 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_03870 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 IPR011050 Pectin lyase fold/virulence factor IM40_03870 IPR012332 P22 tailspike-like, C-terminal domain superfamily IM40_03870 IPR006315 Outer membrane autotransporter barrel IM40_03870 IPR005546 Autotransporter beta-domain IM40_03870 IPR036709 Autotransporter beta-domain superfamily IM40_03875 IPR036390 Winged helix DNA-binding domain superfamily IM40_03875 IPR005119 LysR, substrate-binding IM40_03875 IPR000847 Transcription regulator HTH, LysR IM40_03875 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03890 IPR005119 LysR, substrate-binding IM40_03890 IPR036390 Winged helix DNA-binding domain superfamily IM40_03890 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03890 IPR000847 Transcription regulator HTH, LysR IM40_03910 IPR000719 Protein kinase domain IM40_03910 IPR008271 Serine/threonine-protein kinase, active site IM40_03910 IPR011009 Protein kinase-like domain superfamily IM40_03920 IPR005944 Proline iminopeptidase IM40_03920 IPR002410 Peptidase S33 IM40_03920 IPR000073 Alpha/beta hydrolase fold-1 IM40_03920 IPR029058 Alpha/Beta hydrolase fold IM40_03925 IPR000755 D-alanyl-D-alanine dipeptidase IM40_03925 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily IM40_03960 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_03960 IPR001279 Metallo-beta-lactamase IM40_03960 IPR013471 Ribonuclease Z/BN IM40_04030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_04030 IPR033910 Glutamyl-tRNA synthetase IM40_04030 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IM40_04030 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IM40_04030 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial IM40_04030 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IM40_04030 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IM40_04030 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_04035 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR IM40_04035 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase IM40_04035 IPR032678 tRNA synthetases class I, catalytic domain IM40_04035 IPR015803 Cysteine-tRNA ligase IM40_04035 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IM40_04035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_04045 IPR023000 Shikimate kinase, conserved site IM40_04045 IPR000623 Shikimate kinase/Threonine synthase-like 1 IM40_04045 IPR031322 Shikimate kinase/gluconokinase IM40_04045 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04055 IPR011010 DNA breaking-rejoining enzyme, catalytic core IM40_04055 IPR004107 Integrase, SAM-like, N-terminal IM40_04055 IPR002104 Integrase, catalytic domain IM40_04055 IPR010998 Integrase/recombinase, N-terminal IM40_04055 IPR011932 Tyrosine recombinase XerD IM40_04055 IPR023009 Tyrosine recombinase XerC/XerD IM40_04055 IPR013762 Integrase-like, catalytic domain superfamily IM40_04060 IPR001095 Acetyl-CoA carboxylase, alpha subunit IM40_04060 IPR029045 ClpP/crotonase-like domain superfamily IM40_04060 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IM40_04075 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IM40_04075 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04075 IPR005835 Nucleotidyl transferase domain IM40_04080 IPR017476 UDP-glucose/GDP-mannose dehydrogenase IM40_04080 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal IM40_04080 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily IM40_04080 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation IM40_04080 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal IM40_04080 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type IM40_04080 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IM40_04080 IPR036291 NAD(P)-binding domain superfamily IM40_04100 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily IM40_04100 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IM40_04100 IPR005145 Putative GTP-binding controlling metal-binding domain IM40_04100 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 IM40_04100 IPR006070 YrdC-like domain IM40_04110 IPR001653 Diaminopimelate epimerase, DapF IM40_04110 IPR018510 Diaminopimelate epimerase, active site IM40_04115 IPR023404 Radical SAM, alpha/beta horseshoe IM40_04115 IPR006467 MiaB-like tRNA modifying enzyme IM40_04115 IPR038135 Methylthiotransferase, N-terminal domain superfamily IM40_04115 IPR020612 Methylthiotransferase, conserved site IM40_04115 IPR005839 Methylthiotransferase IM40_04115 IPR007197 Radical SAM IM40_04115 IPR006638 Elp3/MiaB/NifB IM40_04115 IPR013848 Methylthiotransferase, N-terminal IM40_04120 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IM40_04120 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IM40_04120 IPR036225 SRP/SRP receptor, N-terminal IM40_04120 IPR004390 Signal-recognition particle receptor FtsY IM40_04120 IPR013822 Signal recognition particle SRP54, helical bundle IM40_04120 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04120 IPR003593 AAA+ ATPase domain IM40_04125 IPR000962 Zinc finger, DksA/TraR C4-type IM40_04125 IPR020458 Zinc finger, DksA/TraR C4-type conserved site IM40_04125 IPR037187 DksA, N-terminal domain superfamily IM40_04125 IPR012784 RNA polymerase-binding transcription factor DksA IM40_04130 IPR003669 Thymidylate synthase ThyX IM40_04130 IPR036098 Thymidylate synthase ThyX superfamily IM40_04165 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IM40_04165 IPR000192 Aminotransferase class V domain IM40_04165 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IM40_04165 IPR015424 Pyridoxal phosphate-dependent transferase IM40_04165 IPR022278 Phosphoserine aminotransferase IM40_04165 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IM40_04180 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IM40_04180 IPR004401 Nucleoid-associated protein YbaB/EbfC family IM40_04185 IPR000093 DNA recombination protein RecR IM40_04185 IPR034137 RecR, TOPRIM domain IM40_04185 IPR006171 TOPRIM domain IM40_04185 IPR015967 Recombination protein RecR, conserved site IM40_04185 IPR023628 Recombination protein RecR, C4-type zinc finger IM40_04185 IPR023627 Recombination protein RecR IM40_04190 IPR005685 Integration host factor, beta subunit IM40_04190 IPR000119 Histone-like DNA-binding protein IM40_04190 IPR020816 Histone-like DNA-binding protein, conserved site IM40_04190 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_04195 IPR001267 Thymidine kinase IM40_04195 IPR020633 Thymidine kinase, conserved site IM40_04195 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04210 IPR029028 Alpha/beta knot methyltransferases IM40_04210 IPR006700 Ribosomal RNA small subunit methyltransferase E IM40_04210 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_04210 IPR015947 PUA-like superfamily IM40_04215 IPR011066 Mechanosensitive ion channel MscS, C-terminal IM40_04215 IPR023408 Mechanosensitive ion channel MscS domain superfamily IM40_04215 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IM40_04215 IPR006685 Mechanosensitive ion channel MscS IM40_04215 IPR010920 LSM domain superfamily IM40_04220 IPR003445 Cation transporter IM40_04220 IPR004772 TrkH potassium transport family IM40_04250 IPR000477 Reverse transcriptase domain IM40_04275 IPR018278 Ribosomal protein S21, conserved site IM40_04275 IPR038380 Ribosomal protein S21 superfamily IM40_04275 IPR001911 Ribosomal protein S21 IM40_04280 IPR036291 NAD(P)-binding domain superfamily IM40_04280 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IM40_04280 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IM40_04280 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IM40_04280 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IM40_04280 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IM40_04285 IPR020826 Transketolase binding site IM40_04285 IPR005478 Transketolase, bacterial-like IM40_04285 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IM40_04285 IPR005475 Transketolase-like, pyrimidine-binding domain IM40_04285 IPR033248 Transketolase, C-terminal domain IM40_04285 IPR029061 Thiamin diphosphate-binding fold IM40_04285 IPR005474 Transketolase, N-terminal IM40_04285 IPR033247 Transketolase family IM40_04290 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IM40_04290 IPR015797 NUDIX hydrolase-like domain superfamily IM40_04290 IPR029119 MutY, C-terminal IM40_04290 IPR005760 A/G-specific adenine glycosylase MutY IM40_04290 IPR003265 HhH-GPD domain IM40_04290 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IM40_04290 IPR011257 DNA glycosylase IM40_04300 IPR041010 Acetyl-coA carboxylase zinc finger domain IM40_04300 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IM40_04300 IPR029045 ClpP/crotonase-like domain superfamily IM40_04300 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit IM40_04300 IPR034733 Acetyl-CoA carboxylase IM40_04320 IPR032435 Band 7, C-terminal extension IM40_04320 IPR018080 Band 7/stomatin-like, conserved site IM40_04320 IPR001107 Band 7 domain IM40_04320 IPR001972 Stomatin family IM40_04320 IPR036013 Band 7/SPFH domain superfamily IM40_04325 IPR005490 L,D-transpeptidase catalytic domain IM40_04325 IPR036365 PGBD-like superfamily IM40_04325 IPR002477 Peptidoglycan binding-like IM40_04325 IPR038063 L,D-transpeptidase catalytic domain-like IM40_04335 IPR004380 Aspartate racemase IM40_04335 IPR033134 Asp/Glu racemase, active site 2 IM40_04335 IPR018187 Asp/Glu racemase, active site 1 IM40_04335 IPR001920 Asp/Glu racemase IM40_04335 IPR015942 Asp/Glu/hydantoin racemase IM40_04345 IPR029151 Periplasmic sensor-like domain superfamily IM40_04345 IPR029787 Nucleotide cyclase IM40_04345 IPR003660 HAMP domain IM40_04345 IPR033479 Double Cache domain 1 IM40_04345 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase IM40_04350 IPR036458 Sodium:dicarboxylate symporter superfamily IM40_04350 IPR001991 Sodium:dicarboxylate symporter IM40_04350 IPR023954 C4-dicarboxylate transport protein IM40_04350 IPR018107 Sodium:dicarboxylate symporter, conserved site IM40_04355 IPR005119 LysR, substrate-binding IM40_04355 IPR000847 Transcription regulator HTH, LysR IM40_04355 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_04355 IPR036390 Winged helix DNA-binding domain superfamily IM40_04365 IPR035906 MetI-like superfamily IM40_04365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IM40_04370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IM40_04370 IPR035906 MetI-like superfamily IM40_04375 IPR003439 ABC transporter-like IM40_04375 IPR013611 Transport-associated OB, type 2 IM40_04375 IPR017871 ABC transporter, conserved site IM40_04375 IPR008995 Molybdate/tungstate binding, C-terminal IM40_04375 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04375 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit IM40_04375 IPR003593 AAA+ ATPase domain IM40_04380 IPR004734 Multidrug resistance protein IM40_04380 IPR036259 MFS transporter superfamily IM40_04380 IPR011701 Major facilitator superfamily IM40_04380 IPR020846 Major facilitator superfamily domain IM40_04385 IPR036640 ABC transporter type 1, transmembrane domain superfamily IM40_04385 IPR003439 ABC transporter-like IM40_04385 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04385 IPR039421 Type I protein exporter IM40_04385 IPR011527 ABC transporter type 1, transmembrane domain IM40_04385 IPR017871 ABC transporter, conserved site IM40_04385 IPR003593 AAA+ ATPase domain IM40_04390 IPR029072 YebC-like IM40_04390 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent IM40_04390 IPR000788 Ribonucleotide reductase large subunit, C-terminal IM40_04390 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain IM40_04405 IPR003329 Acylneuraminate cytidylyltransferase IM40_04405 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase IM40_04405 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04410 IPR012337 Ribonuclease H-like superfamily IM40_04410 IPR005227 Putative pre-16S rRNA nuclease IM40_04410 IPR006641 YqgF/RNase H-like domain IM40_04410 IPR037027 YqgF/RNase H-like domain superfamily IM40_04415 IPR036591 YggU-like superfamily IM40_04415 IPR003746 Protein of unknown function DUF167 IM40_04430 IPR037294 ABC transporter, BtuC-like IM40_04430 IPR001626 ABC transporter, TroCD-like IM40_04435 IPR017882 Zinc import ATP-binding protein ZnuC IM40_04435 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04435 IPR003439 ABC transporter-like IM40_04435 IPR003593 AAA+ ATPase domain IM40_04440 IPR000715 Glycosyl transferase, family 4 IM40_04455 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04455 IPR003136 Cytidylate kinase IM40_04455 IPR011994 Cytidylate kinase domain IM40_04470 IPR004374 Peptide chain release factor 2 IM40_04470 IPR005139 Peptide chain release factor IM40_04470 IPR000352 Peptide chain release factor class I IM40_04525 IPR001441 Decaprenyl diphosphate synthase-like IM40_04525 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site IM40_04525 IPR036424 Decaprenyl diphosphate synthase-like superfamily IM40_04530 IPR023584 Ribosome recycling factor domain IM40_04530 IPR002661 Ribosome recycling factor IM40_04530 IPR036191 RRF superfamily IM40_04540 IPR036402 Elongation factor Ts, dimerisation domain superfamily IM40_04540 IPR001816 Translation elongation factor EFTs/EF1B IM40_04540 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation IM40_04540 IPR018101 Translation elongation factor Ts, conserved site IM40_04540 IPR009060 UBA-like superfamily IM40_04545 IPR018130 Ribosomal protein S2, conserved site IM40_04545 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid IM40_04545 IPR001865 Ribosomal protein S2 IM40_04545 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily IM40_04555 IPR005115 Uncharacterised domain UPF0126 IM40_04570 IPR013766 Thioredoxin domain IM40_04570 IPR023171 Na/H antiporter domain superfamily IM40_04570 IPR036249 Thioredoxin-like superfamily IM40_04570 IPR012336 Thioredoxin-like fold IM40_04570 IPR004670 Na+/H+ antiporter NhaA IM40_04575 IPR035994 Nucleoside phosphorylase superfamily IM40_04575 IPR000845 Nucleoside phosphorylase domain IM40_04575 IPR018953 AMP nucleoside phosphorylase, N-terminal IM40_04575 IPR011271 AMP nucleosidase IM40_04575 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily IM40_04580 IPR029058 Alpha/Beta hydrolase fold IM40_04580 IPR022742 Serine aminopeptidase, S33 IM40_04585 IPR012693 ABC transporter, phosphonate import, PhnC IM40_04585 IPR003593 AAA+ ATPase domain IM40_04585 IPR003439 ABC transporter-like IM40_04585 IPR017871 ABC transporter, conserved site IM40_04585 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04605 IPR006292 Ribonuclease D IM40_04605 IPR002121 HRDC domain IM40_04605 IPR010997 HRDC-like superfamily IM40_04605 IPR002562 3'-5' exonuclease domain IM40_04605 IPR012337 Ribonuclease H-like superfamily IM40_04605 IPR036397 Ribonuclease H superfamily IM40_04610 IPR004524 Aspartate-tRNA ligase, type 1 IM40_04610 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IM40_04610 IPR012340 Nucleic acid-binding, OB-fold IM40_04610 IPR029351 GAD domain IM40_04610 IPR004115 GAD-like domain superfamily IM40_04610 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb IM40_04610 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IM40_04610 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_04615 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IM40_04615 IPR004556 Methyltransferase HemK-like IM40_04615 IPR025714 Methyltransferase domain IM40_04615 IPR040758 Release factor glutamine methyltransferase, N-terminal domain IM40_04615 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific IM40_04615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_04620 IPR004373 Peptide chain release factor 1 IM40_04620 IPR005139 Peptide chain release factor IM40_04620 IPR000352 Peptide chain release factor class I IM40_04625 IPR015807 Histidine-tRNA ligase IM40_04625 IPR004154 Anticodon-binding IM40_04625 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_04625 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain IM40_04625 IPR036621 Anticodon-binding domain superfamily IM40_04625 IPR033656 Histidyl-anticodon-binding IM40_04625 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit IM40_04635 IPR013785 Aldolase-type TIM barrel IM40_04635 IPR004136 Nitronate monooxygenase IM40_04645 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IM40_04645 IPR030802 ABC transporter permease MalE IM40_04650 IPR017871 ABC transporter, conserved site IM40_04650 IPR003439 ABC transporter-like IM40_04650 IPR003593 AAA+ ATPase domain IM40_04650 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04650 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl IM40_04655 IPR003593 AAA+ ATPase domain IM40_04655 IPR041166 LapB, rubredoxin metal binding domain IM40_04655 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_04655 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IM40_04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04655 IPR014774 KaiC-like domain IM40_04655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_04655 IPR004504 DNA repair protein RadA IM40_04660 IPR003825 Colicin V production, CvpA IM40_04690 IPR029035 DHS-like NAD/FAD-binding domain superfamily IM40_04690 IPR012136 NADP transhydrogenase, beta subunit IM40_04690 IPR034300 NADP transhydrogenase beta-like domain IM40_04695 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal IM40_04700 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IM40_04700 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 IM40_04700 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IM40_04700 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IM40_04700 IPR036291 NAD(P)-binding domain superfamily IM40_04705 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IM40_04705 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site IM40_04705 IPR027304 Trigger factor/SurA domain superfamily IM40_04735 IPR029058 Alpha/Beta hydrolase fold IM40_04735 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IM40_04735 IPR011042 Six-bladed beta-propeller, TolB-like IM40_04755 IPR039421 Type I protein exporter IM40_04755 IPR003439 ABC transporter-like IM40_04755 IPR017871 ABC transporter, conserved site IM40_04755 IPR011527 ABC transporter type 1, transmembrane domain IM40_04755 IPR003593 AAA+ ATPase domain IM40_04755 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04755 IPR036640 ABC transporter type 1, transmembrane domain superfamily IM40_04770 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_04770 IPR006426 Asparagine synthase, glutamine-hydrolyzing IM40_04770 IPR001962 Asparagine synthase IM40_04770 IPR033738 Asparagine synthase, N-terminal domain IM40_04770 IPR017932 Glutamine amidotransferase type 2 domain IM40_04775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_04775 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type IM40_04785 IPR005170 Transporter-associated domain IM40_04785 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_04785 IPR036318 FAD-binding, type PCMH-like superfamily IM40_04785 IPR000644 CBS domain IM40_04790 IPR020549 Endoribonuclease YbeY, conserved site IM40_04790 IPR002036 Endoribonuclease YbeY IM40_04790 IPR023091 Metalloprotease catalytic domain superfamily, predicted IM40_04795 IPR003714 PhoH-like protein IM40_04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04800 IPR023404 Radical SAM, alpha/beta horseshoe IM40_04800 IPR038135 Methylthiotransferase, N-terminal domain superfamily IM40_04800 IPR020612 Methylthiotransferase, conserved site IM40_04800 IPR005839 Methylthiotransferase IM40_04800 IPR006638 Elp3/MiaB/NifB IM40_04800 IPR013848 Methylthiotransferase, N-terminal IM40_04800 IPR007197 Radical SAM IM40_04800 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB IM40_04800 IPR002792 TRAM domain IM40_04805 IPR008807 ROSMUCR transcriptional regulator IM40_04805 IPR041920 ROS/MUCR transcriptional regulator superfamily IM40_04810 IPR017926 Glutamine amidotransferase IM40_04810 IPR029062 Class I glutamine amidotransferase-like IM40_04810 IPR025777 GMP synthetase ATP pyrophosphatase domain IM40_04810 IPR000182 GNAT domain IM40_04810 IPR005019 Methyladenine glycosylase IM40_04810 IPR016181 Acyl-CoA N-acyltransferase IM40_04810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_04810 IPR011257 DNA glycosylase IM40_04810 IPR001674 GMP synthase, C-terminal IM40_04815 IPR000905 Gcp-like domain IM40_04815 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB IM40_04840 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 IPR017687 Outer membrane protein assembly factor BamB IM40_04840 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IM40_04840 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IM40_04840 IPR002372 Pyrrolo-quinoline quinone repeat IM40_04845 IPR031166 EngA-type guanine nucleotide-binding (G) domain IM40_04845 IPR016484 GTP-binding protein EngA IM40_04845 IPR006073 GTP binding domain IM40_04845 IPR032859 GTPase Der, C-terminal KH-domain-like IM40_04845 IPR015946 K homology domain-like, alpha/beta IM40_04845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04845 IPR005225 Small GTP-binding protein domain IM40_04850 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 IPR036291 NAD(P)-binding domain superfamily IM40_04850 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase IM40_04850 IPR020904 Short-chain dehydrogenase/reductase, conserved site IM40_04855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_04855 IPR004398 RNA methyltransferase, RsmD IM40_04855 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IM40_04890 IPR036511 Queuine tRNA-ribosyltransferase-like IM40_04890 IPR004803 tRNA-guanine transglycosylase IM40_04890 IPR002616 tRNA-guanine(15) transglycosylase-like IM40_04900 IPR037147 Ribosomal protein L28/L24 superfamily IM40_04900 IPR026569 Ribosomal protein L28/L24 IM40_04900 IPR034704 L28p-like IM40_04900 IPR001383 Ribosomal protein L28 IM40_04905 IPR035490 GlmS/FrlB, SIS domain 2 IM40_04905 IPR035466 GlmS/AgaS, SIS domain 1 IM40_04905 IPR017932 Glutamine amidotransferase type 2 domain IM40_04905 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising IM40_04905 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_04905 IPR001347 Sugar isomerase (SIS) IM40_04910 IPR038009 GlmU, C-terminal LbH domain IM40_04910 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase IM40_04910 IPR018357 Hexapeptide transferase, conserved site IM40_04910 IPR025877 MobA-like NTP transferase IM40_04910 IPR011004 Trimeric LpxA-like superfamily IM40_04910 IPR001451 Hexapeptide repeat IM40_04910 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04915 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily IM40_04915 IPR010275 Protein of unknown function DUF882 IM40_04915 IPR006311 Twin-arginine translocation pathway, signal sequence IM40_04925 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IM40_04925 IPR018313 Solute-binding protein family 3, conserved site IM40_04925 IPR001320 Ionotropic glutamate receptor IM40_04935 IPR010920 LSM domain superfamily IM40_04935 IPR005001 RNA-binding protein Hfq IM40_04950 IPR022953 ATP-dependent 6-phosphofructokinase IM40_04950 IPR035966 Phosphofructokinase superfamily IM40_04950 IPR015912 Phosphofructokinase, conserved site IM40_04950 IPR000023 Phosphofructokinase domain IM40_04950 IPR012829 Phosphofructokinase, mixed-substrate PFK group III IM40_04950 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type IM40_04970 IPR001706 Ribosomal protein L35, non-mitochondrial IM40_04970 IPR018265 Ribosomal protein L35, conserved site IM40_04970 IPR037229 Ribosomal protein L35 superfamily IM40_04970 IPR021137 Ribosomal protein L35 IM40_04975 IPR035566 Ribosomal protein L20, C-terminal IM40_04975 IPR005813 Ribosomal protein L20 IM40_04980 IPR036390 Winged helix DNA-binding domain superfamily IM40_04980 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_04980 IPR005119 LysR, substrate-binding IM40_04980 IPR000847 Transcription regulator HTH, LysR IM40_04990 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_04990 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit IM40_04990 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal IM40_04990 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial IM40_04990 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IM40_04990 IPR002319 Phenylalanyl-tRNA synthetase IM40_04995 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 IM40_04995 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain IM40_04995 IPR002547 tRNA-binding domain IM40_04995 IPR005147 tRNA synthetase, B5-domain IM40_04995 IPR012340 Nucleic acid-binding, OB-fold IM40_04995 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily IM40_04995 IPR005121 Ferrodoxin-fold anticodon-binding domain IM40_04995 IPR009061 Putative DNA-binding domain superfamily IM40_04995 IPR005146 B3/B4 tRNA-binding domain IM40_04995 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit IM40_04995 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain IM40_05000 IPR035647 EF-G domain III/V-like IM40_05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05000 IPR006297 Elongation factor 4 IM40_05000 IPR000640 Elongation factor EFG, domain V-like IM40_05000 IPR031157 Tr-type G domain, conserved site IM40_05000 IPR038363 LepA, C-terminal domain superfamily IM40_05000 IPR005225 Small GTP-binding protein domain IM40_05000 IPR004161 Translation elongation factor EFTu-like, domain 2 IM40_05000 IPR000795 Transcription factor, GTP-binding domain IM40_05000 IPR035654 Elongation factor 4, domain IV IM40_05000 IPR013842 GTP-binding protein LepA, C-terminal IM40_05010 IPR016181 Acyl-CoA N-acyltransferase IM40_05010 IPR000182 GNAT domain IM40_05010 IPR017813 Mycothiol acetyltransferase IM40_05050 IPR036291 NAD(P)-binding domain superfamily IM40_05050 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase IM40_05050 IPR001509 NAD-dependent epimerase/dehydratase IM40_05055 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt IM40_05075 IPR020781 ATPase, OSCP/delta subunit, conserved site IM40_05075 IPR000711 ATPase, OSCP/delta subunit IM40_05075 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily IM40_05080 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IM40_05080 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IM40_05080 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IM40_05080 IPR005294 ATP synthase, F1 complex, alpha subunit IM40_05080 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain IM40_05080 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily IM40_05080 IPR000793 ATP synthase, alpha subunit, C-terminal IM40_05080 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IM40_05080 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05080 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IM40_05085 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site IM40_05085 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily IM40_05085 IPR000131 ATP synthase, F1 complex, gamma subunit IM40_05090 IPR003593 AAA+ ATPase domain IM40_05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05090 IPR005722 ATP synthase, F1 complex, beta subunit IM40_05090 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IM40_05090 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IM40_05090 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IM40_05090 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal IM40_05090 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IM40_05095 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal IM40_05095 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal IM40_05095 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit IM40_05105 IPR000620 EamA domain IM40_05110 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 IPR036291 NAD(P)-binding domain superfamily IM40_05110 IPR011283 Acetoacetyl-CoA reductase IM40_05110 IPR020904 Short-chain dehydrogenase/reductase, conserved site IM40_05115 IPR005746 Thioredoxin IM40_05115 IPR017937 Thioredoxin, conserved site IM40_05115 IPR036249 Thioredoxin-like superfamily IM40_05115 IPR013766 Thioredoxin domain IM40_05125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_05125 IPR013767 PAS fold IM40_05125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IM40_05125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IM40_05125 IPR005467 Histidine kinase domain IM40_05125 IPR000700 PAS-associated, C-terminal IM40_05125 IPR003594 Histidine kinase/HSP90-like ATPase IM40_05125 IPR035965 PAS domain superfamily IM40_05125 IPR003660 HAMP domain IM40_05125 IPR000014 PAS domain IM40_05125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IM40_05130 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IM40_05130 IPR001714 Peptidase M24, methionine aminopeptidase IM40_05130 IPR000994 Peptidase M24 IM40_05130 IPR000587 Creatinase, N-terminal IM40_05130 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IM40_05130 IPR036005 Creatinase/aminopeptidase-like IM40_05135 IPR000415 Nitroreductase-like IM40_05135 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE IM40_05135 IPR029479 Nitroreductase IM40_05155 IPR020809 Enolase, conserved site IM40_05155 IPR020810 Enolase, C-terminal TIM barrel domain IM40_05155 IPR020811 Enolase, N-terminal IM40_05155 IPR000941 Enolase IM40_05155 IPR036849 Enolase-like, C-terminal domain superfamily IM40_05155 IPR029017 Enolase-like, N-terminal IM40_05170 IPR001387 Cro/C1-type helix-turn-helix domain IM40_05170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IM40_05195 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05195 IPR003593 AAA+ ATPase domain IM40_05195 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IM40_05195 IPR003439 ABC transporter-like IM40_05195 IPR017871 ABC transporter, conserved site IM40_05200 IPR035906 MetI-like superfamily IM40_05200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IM40_05200 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IM40_05210 IPR000119 Histone-like DNA-binding protein IM40_05210 IPR020816 Histone-like DNA-binding protein, conserved site IM40_05210 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_05220 IPR029045 ClpP/crotonase-like domain superfamily IM40_05220 IPR036034 PDZ superfamily IM40_05220 IPR005151 Tail specific protease IM40_05220 IPR012393 Tricorn protease IM40_05220 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IM40_05220 IPR028204 Tricorn protease C1 domain IM40_05220 IPR011659 WD40-like Beta Propeller IM40_05220 IPR029414 Tricorn protease, PDZ domain IM40_05230 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_05230 IPR020605 Octanoyltransferase, conserved site IM40_05230 IPR000544 Octanoyltransferase IM40_05230 IPR001279 Metallo-beta-lactamase IM40_05230 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IM40_05235 IPR018228 Deoxyribonuclease, TatD-related, conserved site IM40_05235 IPR032466 Metal-dependent hydrolase IM40_05235 IPR001130 TatD family IM40_05235 IPR015991 Uncharacterised hydrolase TatD-type IM40_05240 IPR012763 DNA polymerase III, subunit gamma/ tau IM40_05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05240 IPR003593 AAA+ ATPase domain IM40_05245 IPR039430 Thymidylate kinase-like domain IM40_05245 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05245 IPR018094 Thymidylate kinase IM40_05245 IPR018095 Thymidylate kinase, conserved site IM40_05250 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IM40_05250 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IM40_05250 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IM40_05250 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IM40_05250 IPR012338 Beta-lactamase/transpeptidase-like IM40_05250 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IM40_05260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_05260 IPR003848 Domain of unknown function DUF218 IM40_05270 IPR041465 SfsA, N-terminal OB domain IM40_05270 IPR040452 Sugar fermentation stimulation protein, C-terminal IM40_05270 IPR005224 Sugar fermentation stimulation protein IM40_05275 IPR001714 Peptidase M24, methionine aminopeptidase IM40_05275 IPR000994 Peptidase M24 IM40_05275 IPR036005 Creatinase/aminopeptidase-like IM40_05275 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 IM40_05280 IPR042173 Ribonuclease J, domain 2 IM40_05280 IPR030854 Ribonuclease J, bacteria IM40_05280 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain IM40_05280 IPR001279 Metallo-beta-lactamase IM40_05280 IPR041636 Ribonuclease J, C-terminal IM40_05280 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_05285 IPR004619 Type III pantothenate kinase IM40_05290 IPR003142 Biotin protein ligase, C-terminal IM40_05290 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IM40_05290 IPR004408 Biotin--acetyl-CoA-carboxylase ligase IM40_05295 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IM40_05295 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 IM40_05300 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IM40_05300 IPR003918 NADH:ubiquinone oxidoreductase IM40_05300 IPR010227 NADH-quinone oxidoreductase, chain M/4 IM40_05300 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal IM40_05305 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IM40_05305 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 IM40_05305 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup IM40_05305 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal IM40_05310 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like IM40_05310 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K IM40_05315 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ IM40_05315 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 IM40_05330 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 IM40_05330 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 IM40_05330 IPR007221 Rod shape-determining protein MreC IM40_05335 IPR004753 Cell shape determining protein MreB IM40_05350 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IM40_05350 IPR000089 Biotin/lipoyl attachment IM40_05350 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IM40_05350 IPR036625 E3-binding domain superfamily IM40_05350 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IM40_05350 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex IM40_05350 IPR011053 Single hybrid motif IM40_05350 IPR004167 Peripheral subunit-binding domain IM40_05360 IPR001017 Dehydrogenase, E1 component IM40_05360 IPR029061 Thiamin diphosphate-binding fold IM40_05360 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y IM40_05365 IPR038657 Ribosomal protein L19 superfamily IM40_05365 IPR018257 Ribosomal protein L19, conserved site IM40_05365 IPR008991 Translation protein SH3-like domain superfamily IM40_05365 IPR001857 Ribosomal protein L19 IM40_05370 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain IM40_05370 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_05370 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal IM40_05370 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria IM40_05370 IPR029028 Alpha/beta knot methyltransferases IM40_05380 IPR023803 Ribosomal protein S16 domain superfamily IM40_05380 IPR000307 Ribosomal protein S16 IM40_05385 IPR022941 Signal recognition particle, SRP54 subunit IM40_05385 IPR004125 Signal recognition particle, SRP54 subunit, M-domain IM40_05385 IPR003593 AAA+ ATPase domain IM40_05385 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IM40_05385 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05385 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily IM40_05385 IPR013822 Signal recognition particle SRP54, helical bundle IM40_05385 IPR004780 Signal recognition particle protein IM40_05385 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IM40_05390 IPR007211 Protein of unknown function DUF378 IM40_05400 IPR013785 Aldolase-type TIM barrel IM40_05400 IPR001585 Transaldolase/Fructose-6-phosphate aldolase IM40_05400 IPR022999 Transaldolase type 3B, putative IM40_05400 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase IM40_05400 IPR018225 Transaldolase, active site IM40_05400 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial IM40_05405 IPR002104 Integrase, catalytic domain IM40_05405 IPR023009 Tyrosine recombinase XerC/XerD IM40_05405 IPR004107 Integrase, SAM-like, N-terminal IM40_05405 IPR011010 DNA breaking-rejoining enzyme, catalytic core IM40_05405 IPR010998 Integrase/recombinase, N-terminal IM40_05405 IPR013762 Integrase-like, catalytic domain superfamily IM40_05410 IPR003439 ABC transporter-like IM40_05410 IPR004602 UvrABC system subunit A IM40_05410 IPR041552 UvrA DNA-binding domain IM40_05410 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05410 IPR017871 ABC transporter, conserved site IM40_05410 IPR041102 UvrA, interaction domain IM40_05445 IPR003029 S1 domain IM40_05445 IPR022967 RNA-binding domain, S1 IM40_05445 IPR004087 K Homology domain IM40_05445 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical IM40_05445 IPR015946 K homology domain-like, alpha/beta IM40_05445 IPR025249 KH domain, NusA-like IM40_05445 IPR012340 Nucleic acid-binding, OB-fold IM40_05445 IPR009019 K homology domain superfamily, prokaryotic type IM40_05445 IPR036555 NusA, N-terminal domain superfamily IM40_05445 IPR010213 Transcription termination factor NusA IM40_05445 IPR010214 Transcription termination factor NusA, C-terminal duplication IM40_05445 IPR013735 Transcription factor NusA, N-terminal IM40_05445 IPR030842 Transcription termination/antitermination protein NusA, bacterial IM40_05450 IPR006847 Translation initiation factor IF-2, N-terminal IM40_05450 IPR023115 Translation initiation factor IF- 2, domain 3 IM40_05450 IPR015760 Translation initiation factor IF- 2 IM40_05450 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IM40_05450 IPR009000 Translation protein, beta-barrel domain superfamily IM40_05450 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05450 IPR000178 Translation initiation factor aIF-2, bacterial-like IM40_05450 IPR013575 Initiation factor 2 associated domain, bacterial IM40_05450 IPR005225 Small GTP-binding protein domain IM40_05450 IPR000795 Transcription factor, GTP-binding domain IM40_05450 IPR004161 Translation elongation factor EFTu-like, domain 2 IM40_05455 IPR015946 K homology domain-like, alpha/beta IM40_05455 IPR000238 Ribosome-binding factor A IM40_05455 IPR023799 Ribosome-binding factor A domain superfamily IM40_05455 IPR020053 Ribosome-binding factor A, conserved site IM40_05470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_05470 IPR001279 Metallo-beta-lactamase IM40_05470 IPR004797 Competence protein ComEC/Rec2 IM40_05470 IPR004477 ComEC/Rec2-related protein IM40_05470 IPR035681 ComA-like, MBL domain IM40_05475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_05475 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial IM40_05475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_05475 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IM40_05475 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IM40_05475 IPR033910 Glutamyl-tRNA synthetase IM40_05475 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IM40_05475 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IM40_05480 IPR036969 Citrate synthase superfamily IM40_05480 IPR010953 Citrate synthase, type I IM40_05480 IPR019810 Citrate synthase active site IM40_05480 IPR002020 Citrate synthase IM40_05480 IPR024176 Citrate synthase, bacterial-type IM40_05480 IPR016142 Citrate synthase-like, large alpha subdomain IM40_05480 IPR016143 Citrate synthase-like, small alpha subdomain IM40_05490 IPR003824 Undecaprenyl-diphosphatase UppP IM40_05495 IPR036249 Thioredoxin-like superfamily IM40_05495 IPR040079 Glutathione Transferase family IM40_05495 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IM40_05495 IPR004046 Glutathione S-transferase, C-terminal IM40_05495 IPR004045 Glutathione S-transferase, N-terminal IM40_05495 IPR010987 Glutathione S-transferase, C-terminal-like IM40_05500 IPR004176 Clp, N-terminal IM40_05500 IPR001270 ClpA/B family IM40_05500 IPR018368 ClpA/B, conserved site 1 IM40_05500 IPR017730 Chaperonin ClpB IM40_05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05500 IPR003593 AAA+ ATPase domain IM40_05500 IPR028299 ClpA/B, conserved site 2 IM40_05500 IPR036628 Clp, N-terminal domain superfamily IM40_05500 IPR041546 ClpA/ClpB, AAA lid domain IM40_05500 IPR003959 ATPase, AAA-type, core IM40_05500 IPR019489 Clp ATPase, C-terminal IM40_05530 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 IM40_05530 IPR012675 Beta-grasp domain superfamily IM40_05530 IPR031167 OBG-type guanine nucleotide-binding (G) domain IM40_05530 IPR006073 GTP binding domain IM40_05530 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05530 IPR004095 TGS IM40_05530 IPR041706 YchF, N-terminal IM40_05530 IPR013029 YchF, C-terminal domain IM40_05530 IPR012676 TGS-like IM40_05530 IPR023192 TGS-like domain superfamily IM40_05535 IPR001328 Peptidyl-tRNA hydrolase IM40_05535 IPR018171 Peptidyl-tRNA hydrolase, conserved site IM40_05535 IPR036416 Peptidyl-tRNA hydrolase superfamily IM40_05540 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal IM40_05540 IPR029751 Ribosomal protein L25 IM40_05540 IPR001021 Ribosomal protein L25, long-form IM40_05540 IPR037121 Ribosomal protein L25, C-terminal IM40_05540 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily IM40_05540 IPR020057 Ribosomal protein L25, beta domain IM40_05545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_05545 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain IM40_05545 IPR036291 NAD(P)-binding domain superfamily IM40_05550 IPR001509 NAD-dependent epimerase/dehydratase IM40_05550 IPR036291 NAD(P)-binding domain superfamily IM40_05565 IPR036291 NAD(P)-binding domain superfamily IM40_05565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IM40_05565 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IM40_05565 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent IM40_05565 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal IM40_05565 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal IM40_05570 IPR000905 Gcp-like domain IM40_05570 IPR017861 Kae1/TsaD family IM40_05570 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD IM40_05580 IPR000914 Solute-binding protein family 5 domain IM40_05580 IPR030678 Peptide/nickel binding protein, MppA-type IM40_05580 IPR039424 Solute-binding protein family 5 IM40_05585 IPR000298 Cytochrome c oxidase subunit III-like IM40_05585 IPR033945 Cytochrome c oxidase subunit III domain IM40_05585 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle IM40_05585 IPR035973 Cytochrome c oxidase subunit III-like superfamily IM40_05585 IPR024791 Cytochrome c oxidase subunit III IM40_05595 IPR007863 Peptidase M16, C-terminal IM40_05595 IPR011765 Peptidase M16, N-terminal IM40_05595 IPR001431 Peptidase M16, zinc-binding site IM40_05595 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IM40_05600 IPR004771 K+/H+ exchanger IM40_05600 IPR036291 NAD(P)-binding domain superfamily IM40_05600 IPR003148 Regulator of K+ conductance, N-terminal IM40_05600 IPR006153 Cation/H+ exchanger IM40_05600 IPR038770 Sodium/solute symporter superfamily IM40_05600 IPR020884 Glutathione-regulated potassium-efflux system protein KefB IM40_05615 IPR002698 5-formyltetrahydrofolate cyclo-ligase IM40_05615 IPR037171 NagB/RpiA transferase-like IM40_05615 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IM40_05620 IPR005235 Metallophosphoesterase, YmdB-like IM40_05620 IPR029052 Metallo-dependent phosphatase-like IM40_05640 IPR012337 Ribonuclease H-like superfamily IM40_05640 IPR001352 Ribonuclease HII/HIII IM40_05640 IPR036397 Ribonuclease H superfamily IM40_05640 IPR024567 Ribonuclease HII/HIII domain IM40_05640 IPR022898 Ribonuclease HII IM40_05650 IPR013766 Thioredoxin domain IM40_05650 IPR036249 Thioredoxin-like superfamily IM40_05650 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IM40_05650 IPR024706 Peroxiredoxin, AhpC-type IM40_05660 IPR001107 Band 7 domain IM40_05660 IPR036013 Band 7/SPFH domain superfamily IM40_05660 IPR010200 HflC IM40_05665 IPR036034 PDZ superfamily IM40_05665 IPR011782 Peptidase S1C, Do IM40_05665 IPR001940 Peptidase S1C IM40_05665 IPR001478 PDZ domain IM40_05665 IPR009003 Peptidase S1, PA clan IM40_05670 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain IM40_05670 IPR029058 Alpha/Beta hydrolase fold IM40_05690 IPR010242 Transcription factor HTH, IscR IM40_05690 IPR030489 Transcription regulator Rrf2-type, conserved site IM40_05690 IPR000944 Transcription regulator Rrf2-type IM40_05690 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_05690 IPR036390 Winged helix DNA-binding domain superfamily IM40_05695 IPR015424 Pyridoxal phosphate-dependent transferase IM40_05695 IPR016454 Cysteine desulfurase IM40_05695 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IM40_05695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IM40_05695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IM40_05695 IPR000192 Aminotransferase class V domain IM40_05695 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal IM40_05700 IPR016454 Cysteine desulfurase IM40_05700 IPR000192 Aminotransferase class V domain IM40_05700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IM40_05700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IM40_05700 IPR015424 Pyridoxal phosphate-dependent transferase IM40_05700 IPR010240 Cysteine desulfurase IscS IM40_05700 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IM40_05705 IPR011339 ISC system FeS cluster assembly, IscU scaffold IM40_05705 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal IM40_05710 IPR000361 FeS cluster biogenesis IM40_05710 IPR016092 FeS cluster insertion protein IM40_05710 IPR017870 FeS cluster insertion, C-terminal, conserved site IM40_05710 IPR035903 HesB-like domain superfamily IM40_05720 IPR042039 HscA chaperone, nucleotide-binding domain IM40_05720 IPR018181 Heat shock protein 70, conserved site IM40_05720 IPR013126 Heat shock protein 70 family IM40_05720 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IM40_05720 IPR010236 ISC system FeS cluster assembly, HscA chaperone IM40_05720 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IM40_05750 IPR036291 NAD(P)-binding domain superfamily IM40_05750 IPR042113 Phosphate acetyltransferase, domain 1 IM40_05750 IPR037062 Malic enzyme, N-terminal domain superfamily IM40_05750 IPR042112 Phosphate acetyltransferase, domain 2 IM40_05750 IPR002505 Phosphate acetyl/butaryl transferase IM40_05750 IPR012188 NAD(P)-dependent malic enzyme IM40_05750 IPR015884 Malic enzyme, conserved site IM40_05750 IPR012302 Malic enzyme, NAD-binding IM40_05750 IPR012301 Malic enzyme, N-terminal domain IM40_05755 IPR006668 Magnesium transporter, MgtE intracellular domain IM40_05755 IPR000644 CBS domain IM40_05755 IPR006667 SLC41 divalent cation transporters, integral membrane domain IM40_05755 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IM40_05755 IPR006669 Magnesium transporter MgtE IM40_05755 IPR038048 Magnesium transporter MgtE, transmembrane domain IM40_05755 IPR038076 MgtE, N-terminal domain superfamily IM40_05760 IPR020613 Thiolase, conserved site IM40_05760 IPR020615 Thiolase, acyl-enzyme intermediate active site IM40_05760 IPR020617 Thiolase, C-terminal IM40_05760 IPR020610 Thiolase, active site IM40_05760 IPR020616 Thiolase, N-terminal IM40_05760 IPR002155 Thiolase IM40_05760 IPR016039 Thiolase-like IM40_05790 IPR025188 Domain of unknown function DUF4113 IM40_05790 IPR001126 UmuC domain IM40_05790 IPR017961 DNA polymerase, Y-family, little finger domain IM40_05790 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IM40_05830 IPR001584 Integrase, catalytic core IM40_05830 IPR025948 HTH-like domain IM40_05830 IPR012337 Ribonuclease H-like superfamily IM40_05830 IPR036397 Ribonuclease H superfamily IM40_05850 IPR001789 Signal transduction response regulator, receiver domain IM40_05850 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal IM40_05850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_05850 IPR003594 Histidine kinase/HSP90-like ATPase IM40_05850 IPR011006 CheY-like superfamily IM40_05850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IM40_05850 IPR005467 Histidine kinase domain IM40_05850 IPR030856 Sensor histidine kinase RcsC IM40_05850 IPR038388 RcsC, C-terminal domain superfamily IM40_05850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IM40_05850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IM40_05855 IPR003346 Transposase, IS116/IS110/IS902 IM40_05855 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_05895 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site IM40_05895 IPR005279 Dipeptide/tripeptide permease IM40_05895 IPR020846 Major facilitator superfamily domain IM40_05895 IPR036259 MFS transporter superfamily IM40_05895 IPR000109 Proton-dependent oligopeptide transporter family IM40_05905 IPR000847 Transcription regulator HTH, LysR IM40_05905 IPR005119 LysR, substrate-binding IM40_05905 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_05905 IPR036390 Winged helix DNA-binding domain superfamily IM40_05935 IPR001269 tRNA-dihydrouridine synthase IM40_05935 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 IM40_05935 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal IM40_05935 IPR035587 DUS-like, FMN-binding domain IM40_05935 IPR013785 Aldolase-type TIM barrel IM40_05935 IPR018517 tRNA-dihydrouridine synthase, conserved site IM40_05940 IPR001789 Signal transduction response regulator, receiver domain IM40_05940 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IM40_05940 IPR025944 Sigma-54 interaction domain, conserved site IM40_05940 IPR010114 DNA-binding transcriptional regulator NtrC IM40_05940 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05940 IPR003593 AAA+ ATPase domain IM40_05940 IPR002078 RNA polymerase sigma factor 54 interaction domain IM40_05940 IPR002197 DNA binding HTH domain, Fis-type IM40_05940 IPR011006 CheY-like superfamily IM40_05940 IPR009057 Homeobox-like domain superfamily IM40_05950 IPR002078 RNA polymerase sigma factor 54 interaction domain IM40_05950 IPR001789 Signal transduction response regulator, receiver domain IM40_05950 IPR002197 DNA binding HTH domain, Fis-type IM40_05950 IPR009057 Homeobox-like domain superfamily IM40_05950 IPR003593 AAA+ ATPase domain IM40_05950 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IM40_05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05950 IPR025944 Sigma-54 interaction domain, conserved site IM40_05950 IPR011006 CheY-like superfamily IM40_05955 IPR006036 Potassium uptake protein TrkA IM40_05955 IPR036291 NAD(P)-binding domain superfamily IM40_05955 IPR006037 Regulator of K+ conductance, C-terminal IM40_05955 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IM40_05955 IPR003148 Regulator of K+ conductance, N-terminal IM40_05965 IPR011006 CheY-like superfamily IM40_05965 IPR001789 Signal transduction response regulator, receiver domain IM40_05990 IPR014004 Transport-associated and nodulation domain, bacteria IM40_05990 IPR007055 BON domain IM40_06005 IPR001303 Class II aldolase/adducin N-terminal IM40_06005 IPR036409 Class II aldolase/adducin N-terminal domain superfamily IM40_06135 IPR008258 Transglycosylase SLT domain 1 IM40_06135 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily IM40_06135 IPR000189 Prokaryotic transglycosylase, active site IM40_06135 IPR023346 Lysozyme-like domain superfamily IM40_06135 IPR012289 Lytic transglycosylase, superhelical linker IM40_06135 IPR008939 Lytic transglycosylase, superhelical U-shaped IM40_06140 IPR013785 Aldolase-type TIM barrel IM40_06140 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA IM40_06140 IPR020624 Schiff base-forming aldolase, conserved site IM40_06140 IPR020625 Schiff base-forming aldolase, active site IM40_06140 IPR002220 DapA-like IM40_06145 IPR023620 Small protein B IM40_06145 IPR000037 SsrA-binding protein IM40_06145 IPR020081 SsrA-binding protein, conserved site IM40_06160 IPR014004 Transport-associated and nodulation domain, bacteria IM40_06160 IPR007055 BON domain IM40_06170 IPR008909 DALR anticodon binding IM40_06170 IPR015944 Glycine-tRNA ligase, beta subunit IM40_06170 IPR006194 Glycine-tRNA synthetase, heterodimeric IM40_06175 IPR002310 Glycine-tRNA ligase, alpha subunit IM40_06175 IPR006194 Glycine-tRNA synthetase, heterodimeric IM40_06210 IPR007083 RNA polymerase Rpb1, domain 4 IM40_06210 IPR012754 DNA-directed RNA polymerase, subunit beta-prime IM40_06210 IPR000722 RNA polymerase, alpha subunit IM40_06210 IPR006592 RNA polymerase, N-terminal IM40_06210 IPR007080 RNA polymerase Rpb1, domain 1 IM40_06210 IPR007066 RNA polymerase Rpb1, domain 3 IM40_06210 IPR042102 RNA polymerase Rpb1, domain 3 superfamily IM40_06210 IPR007081 RNA polymerase Rpb1, domain 5 IM40_06210 IPR038120 RNA polymerase Rpb1, funnel domain superfamily IM40_06215 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain IM40_06215 IPR015712 DNA-directed RNA polymerase, subunit 2 IM40_06215 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain IM40_06215 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily IM40_06215 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type IM40_06215 IPR007644 RNA polymerase, beta subunit, protrusion IM40_06215 IPR007121 RNA polymerase, beta subunit, conserved site IM40_06215 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IM40_06215 IPR007641 RNA polymerase Rpb2, domain 7 IM40_06215 IPR007645 RNA polymerase Rpb2, domain 3 IM40_06215 IPR037034 RNA polymerase Rpb2, domain 2 superfamily IM40_06215 IPR007642 RNA polymerase Rpb2, domain 2 IM40_06215 IPR014724 RNA polymerase Rpb2, OB-fold IM40_06220 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IM40_06220 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily IM40_06220 IPR008932 Ribosomal protein L7/L12, oligomerisation IM40_06220 IPR000206 Ribosomal protein L7/L12 IM40_06220 IPR013823 Ribosomal protein L7/L12, C-terminal IM40_06225 IPR001790 Ribosomal protein L10P IM40_06225 IPR022973 Ribosomal protein L10 IM40_06225 IPR002363 Ribosomal protein L10, eubacterial, conserved site IM40_06230 IPR005878 Ribosomal protein L1, bacterial-type IM40_06230 IPR002143 Ribosomal protein L1 IM40_06230 IPR023674 Ribosomal protein L1-like IM40_06230 IPR023673 Ribosomal protein L1, conserved site IM40_06230 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IM40_06230 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein IM40_06235 IPR020783 Ribosomal protein L11, C-terminal IM40_06235 IPR036769 Ribosomal protein L11, C-terminal domain superfamily IM40_06235 IPR000911 Ribosomal protein L11/L12 IM40_06235 IPR020784 Ribosomal protein L11, N-terminal IM40_06235 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IM40_06235 IPR006519 Ribosomal protein L11, bacterial-type IM40_06240 IPR005824 KOW IM40_06240 IPR008991 Translation protein SH3-like domain superfamily IM40_06240 IPR006645 NusG, N-terminal IM40_06240 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site IM40_06240 IPR036735 NusG, N-terminal domain superfamily IM40_06240 IPR014722 Ribosomal protein L2, domain 2 IM40_06240 IPR001062 Transcription antitermination protein, NusG IM40_06255 IPR031157 Tr-type G domain, conserved site IM40_06255 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IM40_06255 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IM40_06255 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IM40_06255 IPR000795 Transcription factor, GTP-binding domain IM40_06255 IPR009000 Translation protein, beta-barrel domain superfamily IM40_06255 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IM40_06255 IPR033720 Elongation factor Tu, domain 2 IM40_06255 IPR004161 Translation elongation factor EFTu-like, domain 2 IM40_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06255 IPR005225 Small GTP-binding protein domain IM40_06275 IPR005222 Competence protein ComF IM40_06275 IPR029057 Phosphoribosyltransferase-like IM40_06275 IPR000836 Phosphoribosyltransferase domain IM40_06280 IPR002109 Glutaredoxin IM40_06280 IPR011767 Glutaredoxin active site IM40_06280 IPR036249 Thioredoxin-like superfamily IM40_06280 IPR011900 Glutaredoxin, GrxC IM40_06280 IPR014025 Glutaredoxin subgroup IM40_06285 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_06285 IPR020816 Histone-like DNA-binding protein, conserved site IM40_06285 IPR000119 Histone-like DNA-binding protein IM40_06300 IPR023393 START-like domain superfamily IM40_06300 IPR005031 Coenzyme Q-binding protein COQ10, START domain IM40_06305 IPR013785 Aldolase-type TIM barrel IM40_06305 IPR006638 Elp3/MiaB/NifB IM40_06305 IPR031691 Lipoyl synthase, N-terminal IM40_06305 IPR003698 Lipoyl synthase IM40_06305 IPR007197 Radical SAM IM40_06310 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06310 IPR023753 FAD/NAD(P)-binding domain IM40_06310 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IM40_06310 IPR006258 Dihydrolipoamide dehydrogenase IM40_06310 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IM40_06310 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IM40_06310 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IM40_06315 IPR039420 Transcriptional regulatory protein WalR-like IM40_06315 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06315 IPR016032 Signal transduction response regulator, C-terminal effector IM40_06315 IPR001867 OmpR/PhoB-type DNA-binding domain IM40_06315 IPR011006 CheY-like superfamily IM40_06315 IPR001789 Signal transduction response regulator, receiver domain IM40_06325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_06325 IPR007473 Ribosomal RNA large subunit methyltransferase J IM40_06325 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IM40_06330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_06330 IPR005467 Histidine kinase domain IM40_06330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IM40_06330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IM40_06330 IPR003594 Histidine kinase/HSP90-like ATPase IM40_06330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IM40_06355 IPR036161 RPB6/omega subunit-like superfamily IM40_06355 IPR012293 RNA polymerase subunit, RPB6/omega IM40_06355 IPR006110 RNA polymerase, subunit omega/K/RPB6 IM40_06355 IPR003716 DNA-directed RNA polymerase, omega subunit IM40_06360 IPR012676 TGS-like IM40_06360 IPR004811 RelA/SpoT family IM40_06360 IPR003607 HD/PDEase domain IM40_06360 IPR012675 Beta-grasp domain superfamily IM40_06360 IPR002912 ACT domain IM40_06360 IPR033655 RelA, TGS domain IM40_06360 IPR007685 RelA/SpoT IM40_06360 IPR004095 TGS IM40_06365 IPR008268 Peptidase S16, active site IM40_06365 IPR003959 ATPase, AAA-type, core IM40_06365 IPR003593 AAA+ ATPase domain IM40_06365 IPR027543 Lon protease, bacterial IM40_06365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_06365 IPR008269 Peptidase S16, Lon proteolytic domain IM40_06365 IPR027065 Lon protease IM40_06365 IPR004815 Lon protease, bacterial/eukaryotic-type IM40_06365 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06365 IPR015947 PUA-like superfamily IM40_06365 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_06365 IPR003111 Lon, substrate-binding domain IM40_06370 IPR010603 Zinc finger, ClpX C4-type IM40_06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06370 IPR004487 Clp protease, ATP-binding subunit ClpX IM40_06370 IPR019489 Clp ATPase, C-terminal IM40_06370 IPR003959 ATPase, AAA-type, core IM40_06370 IPR003593 AAA+ ATPase domain IM40_06370 IPR038366 Zinc finger, ClpX C4-type superfamily IM40_06375 IPR018215 ClpP, Ser active site IM40_06375 IPR033135 ClpP, histidine active site IM40_06375 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IM40_06375 IPR029045 ClpP/crotonase-like domain superfamily IM40_06375 IPR001907 ATP-dependent Clp protease proteolytic subunit IM40_06380 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IM40_06380 IPR005215 Trigger factor IM40_06380 IPR036611 Trigger factor ribosome-binding domain superfamily IM40_06380 IPR037041 Trigger factor, C-terminal domain superfamily IM40_06380 IPR008880 Trigger factor, C-terminal IM40_06380 IPR008881 Trigger factor, ribosome-binding, bacterial IM40_06380 IPR027304 Trigger factor/SurA domain superfamily IM40_06400 IPR003593 AAA+ ATPase domain IM40_06400 IPR041569 AAA ATPase, AAA+ lid domain IM40_06400 IPR003959 ATPase, AAA-type, core IM40_06400 IPR011546 Peptidase M41, FtsH extracellular IM40_06400 IPR005936 Peptidase, FtsH IM40_06400 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06400 IPR000642 Peptidase M41 IM40_06400 IPR037219 Peptidase M41-like IM40_06400 IPR003960 ATPase, AAA-type, conserved site IM40_06475 IPR011034 Formyl transferase-like, C-terminal domain superfamily IM40_06475 IPR003180 Methylpurine-DNA glycosylase IM40_06475 IPR036995 Methylpurine-DNA glycosylase superfamily IM40_06490 IPR036390 Winged helix DNA-binding domain superfamily IM40_06490 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06490 IPR005119 LysR, substrate-binding IM40_06490 IPR000847 Transcription regulator HTH, LysR IM40_06510 IPR036249 Thioredoxin-like superfamily IM40_06525 IPR003601 DNA topoisomerase, type IA, domain 2 IM40_06525 IPR003602 DNA topoisomerase, type IA, DNA-binding domain IM40_06525 IPR023405 DNA topoisomerase, type IA, core domain IM40_06525 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IM40_06525 IPR028612 DNA topoisomerase I, type IA IM40_06525 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IM40_06525 IPR025589 Topoisomerase C-terminal repeat IM40_06525 IPR034149 DNA topoisomerase 1, TOPRIM domain IM40_06525 IPR013498 DNA topoisomerase, type IA, zn finger IM40_06525 IPR000380 DNA topoisomerase, type IA IM40_06525 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IM40_06525 IPR013497 DNA topoisomerase, type IA, central IM40_06525 IPR023406 DNA topoisomerase, type IA, active site IM40_06525 IPR006171 TOPRIM domain IM40_06525 IPR005733 DNA topoisomerase I, bacterial-type IM40_06530 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06530 IPR010994 RuvA domain 2-like IM40_06530 IPR003488 DNA recombination-mediator protein A IM40_06530 IPR041614 DprA, winged helix domain IM40_06535 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY IM40_06540 IPR029028 Alpha/beta knot methyltransferases IM40_06540 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB IM40_06540 IPR029064 50S ribosomal protein L30e-like IM40_06540 IPR004441 RNA methyltransferase TrmH family IM40_06540 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_06540 IPR013123 RNA 2-O ribose methyltransferase, substrate binding IM40_06540 IPR001537 tRNA/rRNA methyltransferase, SpoU type IM40_06560 IPR003782 Copper chaperone SCO1/SenC IM40_06560 IPR036249 Thioredoxin-like superfamily IM40_06570 IPR013094 Alpha/beta hydrolase fold-3 IM40_06570 IPR029058 Alpha/Beta hydrolase fold IM40_06585 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family IM40_06585 IPR004785 Ribose 5-phosphate isomerase B IM40_06585 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily IM40_06620 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IM40_06620 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IM40_06620 IPR004036 Endonuclease III-like, conserved site-2 IM40_06620 IPR005759 Endonuclease III IM40_06620 IPR011257 DNA glycosylase IM40_06620 IPR004035 Endonuclease III, iron-sulphur binding site IM40_06620 IPR003265 HhH-GPD domain IM40_06620 IPR000445 Helix-hairpin-helix motif IM40_06635 IPR011006 CheY-like superfamily IM40_06635 IPR001867 OmpR/PhoB-type DNA-binding domain IM40_06635 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06635 IPR001789 Signal transduction response regulator, receiver domain IM40_06635 IPR039420 Transcriptional regulatory protein WalR-like IM40_06640 IPR036259 MFS transporter superfamily IM40_06640 IPR004667 ADP/ATP carrier protein IM40_06655 IPR001697 Pyruvate kinase IM40_06655 IPR015806 Pyruvate kinase, insert domain superfamily IM40_06655 IPR036918 Pyruvate kinase, C-terminal domain superfamily IM40_06655 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IM40_06655 IPR015795 Pyruvate kinase, C-terminal IM40_06655 IPR015793 Pyruvate kinase, barrel IM40_06655 IPR018209 Pyruvate kinase, active site IM40_06655 IPR011037 Pyruvate kinase-like, insert domain superfamily IM40_06655 IPR040442 Pyruvate kinase-like domain superfamily IM40_06660 IPR000620 EamA domain IM40_06665 IPR017926 Glutamine amidotransferase IM40_06665 IPR029062 Class I glutamine amidotransferase-like IM40_06670 IPR001912 Ribosomal protein S4/S9, N-terminal IM40_06670 IPR036986 RNA-binding S4 domain superfamily IM40_06670 IPR002942 RNA-binding S4 domain IM40_06670 IPR005709 Ribosomal protein S4, bacterial-type IM40_06670 IPR018079 Ribosomal protein S4, conserved site IM40_06670 IPR022801 Ribosomal protein S4/S9 IM40_06680 IPR000846 Dihydrodipicolinate reductase, N-terminal IM40_06680 IPR036291 NAD(P)-binding domain superfamily IM40_06680 IPR022664 Dihydrodipicolinate reductase, conserved site IM40_06680 IPR023940 Dihydrodipicolinate reductase IM40_06680 IPR022663 Dihydrodipicolinate reductase, C-terminal IM40_06685 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06685 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IM40_06685 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase IM40_06715 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial IM40_06715 IPR011114 Holliday junction DNA helicase RuvA, C-terminal IM40_06715 IPR036267 RuvA, C-terminal domain superfamily IM40_06715 IPR010994 RuvA domain 2-like IM40_06715 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IM40_06715 IPR000085 Bacterial DNA recombination protein RuvA IM40_06715 IPR012340 Nucleic acid-binding, OB-fold IM40_06720 IPR012337 Ribonuclease H-like superfamily IM40_06720 IPR002176 Crossover junction endodeoxyribonuclease RuvC IM40_06720 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site IM40_06720 IPR036397 Ribonuclease H superfamily IM40_06725 IPR029072 YebC-like IM40_06725 IPR017856 Integrase-like, N-terminal IM40_06725 IPR002876 Transcriptional regulator TACO1-like IM40_06725 IPR026564 Transcriptional regulator TACO1-like, domain 3 IM40_06770 IPR009354 Usg-like IM40_06780 IPR002326 Cytochrome c1 IM40_06780 IPR009056 Cytochrome c-like domain IM40_06780 IPR036909 Cytochrome c-like domain superfamily IM40_06785 IPR027387 Cytochrome b/b6-like domain superfamily IM40_06785 IPR016174 Di-haem cytochrome, transmembrane IM40_06785 IPR030689 Cytochrome b IM40_06785 IPR005797 Cytochrome b/b6, N-terminal IM40_06785 IPR036150 Cytochrome b/b6, C-terminal domain superfamily IM40_06785 IPR005798 Cytochrome b/b6, C-terminal IM40_06790 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IM40_06790 IPR017941 Rieske [2Fe-2S] iron-sulphur domain IM40_06790 IPR005805 Rieske iron-sulphur protein, C-terminal IM40_06790 IPR014349 Rieske iron-sulphur protein IM40_06790 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal IM40_06790 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal IM40_06790 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit IM40_06790 IPR006311 Twin-arginine translocation pathway, signal sequence IM40_06810 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06810 IPR000847 Transcription regulator HTH, LysR IM40_06810 IPR005119 LysR, substrate-binding IM40_06810 IPR036390 Winged helix DNA-binding domain superfamily IM40_06820 IPR002559 Transposase, IS4-like IM40_06825 IPR016130 Protein-tyrosine phosphatase, active site IM40_06825 IPR000387 Tyrosine specific protein phosphatases domain IM40_06825 IPR029021 Protein-tyrosine phosphatase-like IM40_06835 IPR029021 Protein-tyrosine phosphatase-like IM40_06835 IPR016130 Protein-tyrosine phosphatase, active site IM40_06835 IPR000387 Tyrosine specific protein phosphatases domain IM40_06840 IPR033658 Glutaredoxin, PICOT-like IM40_06840 IPR004480 Monothiol glutaredoxin-related IM40_06840 IPR036249 Thioredoxin-like superfamily IM40_06840 IPR002109 Glutaredoxin IM40_06840 IPR014434 Monothiol glutaredoxin IM40_06875 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal IM40_06875 IPR034904 Fe-S cluster assembly domain superfamily IM40_06885 IPR002305 Aminoacyl-tRNA synthetase, class Ic IM40_06885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06885 IPR002942 RNA-binding S4 domain IM40_06885 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 IM40_06885 IPR024088 Tyrosine-tRNA ligase, bacterial-type IM40_06885 IPR036986 RNA-binding S4 domain superfamily IM40_06885 IPR002307 Tyrosine-tRNA ligase IM40_06890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06890 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal IM40_06890 IPR012255 Electron transfer flavoprotein, beta subunit IM40_06890 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site IM40_06890 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IM40_06895 IPR029035 DHS-like NAD/FAD-binding domain superfamily IM40_06895 IPR001308 Electron transfer flavoprotein alpha subunit/FixB IM40_06895 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal IM40_06895 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal IM40_06895 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site IM40_06895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06895 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IM40_06915 IPR003761 Exonuclease VII, small subunit IM40_06915 IPR037004 Exonuclease VII, small subunit superfamily IM40_06935 IPR016185 Pre-ATP-grasp domain superfamily IM40_06935 IPR011761 ATP-grasp fold IM40_06935 IPR005482 Biotin carboxylase, C-terminal IM40_06935 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IM40_06935 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase IM40_06935 IPR011054 Rudiment single hybrid motif IM40_06935 IPR011764 Biotin carboxylation domain IM40_06935 IPR005481 Biotin carboxylase-like, N-terminal domain IM40_06935 IPR013815 ATP-grasp fold, subdomain 1 IM40_06940 IPR011053 Single hybrid motif IM40_06940 IPR001249 Acetyl-CoA biotin carboxyl carrier IM40_06940 IPR001882 Biotin-binding site IM40_06940 IPR000089 Biotin/lipoyl attachment IM40_06945 IPR011335 Restriction endonuclease type II-like IM40_06945 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IM40_06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06945 IPR000212 DNA helicase, UvrD/REP type IM40_06945 IPR011604 Exonuclease, phage-type/RecB, C-terminal IM40_06945 IPR034739 UvrD/AddA helicase, N-terminal IM40_06945 IPR014016 UvrD-like helicase, ATP-binding domain IM40_06945 IPR014152 DNA helicase subunit AddA IM40_06945 IPR014017 UvrD-like DNA helicase, C-terminal IM40_06950 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IM40_06950 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06955 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06955 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE IM40_06960 IPR037143 4'-phosphopantetheinyl transferase domain superfamily IM40_06960 IPR008278 4'-phosphopantetheinyl transferase domain IM40_06960 IPR002582 Holo-[acyl carrier protein] synthase IM40_06960 IPR004568 Phosphopantetheine-protein transferase domain IM40_06965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_06965 IPR002306 Tryptophan-tRNA ligase IM40_06965 IPR002305 Aminoacyl-tRNA synthetase, class Ic IM40_06965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06965 IPR024109 Tryptophan-tRNA ligase, bacterial-type IM40_06970 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_07020 IPR000620 EamA domain IM40_07050 IPR007861 DNA mismatch repair protein MutS, clamp IM40_07050 IPR036187 DNA mismatch repair protein MutS, core domain superfamily IM40_07050 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07050 IPR007860 DNA mismatch repair protein MutS, connector domain IM40_07050 IPR007695 DNA mismatch repair protein MutS-like, N-terminal IM40_07050 IPR036678 MutS, connector domain superfamily IM40_07050 IPR005748 DNA mismatch repair protein MutS IM40_07050 IPR017261 DNA mismatch repair protein MutS/MSH IM40_07050 IPR000432 DNA mismatch repair protein MutS, C-terminal IM40_07050 IPR016151 DNA mismatch repair protein MutS, N-terminal IM40_07050 IPR007696 DNA mismatch repair protein MutS, core IM40_07055 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site IM40_07055 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07055 IPR002938 FAD-binding domain IM40_07055 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase IM40_07055 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 IM40_07060 IPR036397 Ribonuclease H superfamily IM40_07060 IPR022892 Ribonuclease HI IM40_07060 IPR002156 Ribonuclease H domain IM40_07060 IPR012337 Ribonuclease H-like superfamily IM40_07075 IPR023753 FAD/NAD(P)-binding domain IM40_07075 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07075 IPR022890 Ferredoxin--NADP reductase, type 2 IM40_07085 IPR015824 Phosphoglycerate kinase, N-terminal IM40_07085 IPR015911 Phosphoglycerate kinase, conserved site IM40_07085 IPR001576 Phosphoglycerate kinase IM40_07085 IPR036043 Phosphoglycerate kinase superfamily IM40_07100 IPR006129 Adhesin B IM40_07100 IPR006127 Periplasmic solute binding protein, ZnuA-like IM40_07100 IPR006128 Adhesion lipoprotein IM40_07105 IPR001626 ABC transporter, TroCD-like IM40_07105 IPR037294 ABC transporter, BtuC-like IM40_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07120 IPR005286 Cell division protein FtsE, ATP-binding IM40_07120 IPR017871 ABC transporter, conserved site IM40_07120 IPR003439 ABC transporter-like IM40_07120 IPR003593 AAA+ ATPase domain IM40_07140 IPR002123 Phospholipid/glycerol acyltransferase IM40_07140 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase IM40_07155 IPR005247 YbhB/YbcL IM40_07155 IPR036610 PEBP-like superfamily IM40_07155 IPR008914 Phosphatidylethanolamine-binding protein IM40_07165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_07165 IPR010233 Ubiquinone biosynthesis O-methyltransferase IM40_07170 IPR027795 CASTOR, ACT domain IM40_07170 IPR036393 Acetylglutamate kinase-like superfamily IM40_07170 IPR002912 ACT domain IM40_07170 IPR041740 Aspartokinase catalytic domain IM40_07170 IPR001048 Aspartate/glutamate/uridylate kinase IM40_07170 IPR005260 Aspartate kinase, monofunctional class IM40_07170 IPR018042 Aspartate kinase, conserved site IM40_07170 IPR001341 Aspartate kinase IM40_07190 IPR001247 Exoribonuclease, phosphorolytic domain 1 IM40_07190 IPR027408 PNPase/RNase PH domain superfamily IM40_07190 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_07190 IPR002381 Ribonuclease PH, bacterial-type IM40_07190 IPR018336 Ribonuclease PH, conserved site IM40_07190 IPR036345 Exoribonuclease, PH domain 2 superfamily IM40_07190 IPR015847 Exoribonuclease, phosphorolytic domain 2 IM40_07195 IPR029016 GAF-like domain superfamily IM40_07195 IPR002571 Heat-inducible transcription repressor HrcA IM40_07195 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_07195 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal IM40_07195 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily IM40_07195 IPR036390 Winged helix DNA-binding domain superfamily IM40_07200 IPR000740 GrpE nucleotide exchange factor IM40_07200 IPR009012 GrpE nucleotide exchange factor, head IM40_07200 IPR013805 GrpE nucleotide exchange factor, coiled-coil IM40_07210 IPR006258 Dihydrolipoamide dehydrogenase IM40_07210 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07210 IPR023753 FAD/NAD(P)-binding domain IM40_07210 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IM40_07210 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IM40_07210 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IM40_07210 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IM40_07215 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IM40_07215 IPR011053 Single hybrid motif IM40_07215 IPR006255 Dihydrolipoamide succinyltransferase IM40_07215 IPR000089 Biotin/lipoyl attachment IM40_07215 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IM40_07215 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IM40_07215 IPR036625 E3-binding domain superfamily IM40_07215 IPR004167 Peripheral subunit-binding domain IM40_07220 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain IM40_07220 IPR001017 Dehydrogenase, E1 component IM40_07220 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial IM40_07220 IPR011603 2-oxoglutarate dehydrogenase E1 component IM40_07220 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal IM40_07220 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily IM40_07220 IPR029061 Thiamin diphosphate-binding fold IM40_07220 IPR005475 Transketolase-like, pyrimidine-binding domain IM40_07230 IPR005810 Succinyl-CoA ligase, alpha subunit IM40_07230 IPR003781 CoA-binding IM40_07230 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site IM40_07230 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IM40_07230 IPR016102 Succinyl-CoA synthetase-like IM40_07230 IPR036291 NAD(P)-binding domain superfamily IM40_07230 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IM40_07235 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site IM40_07235 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type IM40_07235 IPR005809 Succinate--CoA synthetase, beta subunit IM40_07235 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IM40_07235 IPR013815 ATP-grasp fold, subdomain 1 IM40_07235 IPR016102 Succinyl-CoA synthetase-like IM40_07235 IPR011761 ATP-grasp fold IM40_07240 IPR001557 L-lactate/malate dehydrogenase IM40_07240 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IM40_07240 IPR011275 Malate dehydrogenase, type 3 IM40_07240 IPR036291 NAD(P)-binding domain superfamily IM40_07240 IPR001236 Lactate/malate dehydrogenase, N-terminal IM40_07240 IPR022383 Lactate/malate dehydrogenase, C-terminal IM40_07245 IPR003140 Phospholipase/carboxylesterase/thioesterase IM40_07245 IPR029058 Alpha/Beta hydrolase fold IM40_07250 IPR000620 EamA domain IM40_07260 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid IM40_07260 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 IM40_07260 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily IM40_07265 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit IM40_07265 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit IM40_07270 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site IM40_07270 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit IM40_07270 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily IM40_07270 IPR010218 NADH dehydrogenase, subunit C IM40_07275 IPR029014 [NiFe]-hydrogenase, large subunit IM40_07275 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H IM40_07275 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site IM40_07275 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily IM40_07275 IPR001135 NADH-quinone oxidoreductase, subunit D IM40_07280 IPR036249 Thioredoxin-like superfamily IM40_07280 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal IM40_07280 IPR002023 NADH-quinone oxidoreductase subunit E-like IM40_07280 IPR042128 NuoE domain IM40_07285 IPR011537 NADH ubiquinone oxidoreductase, F subunit IM40_07285 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain IM40_07285 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily IM40_07285 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site IM40_07285 IPR019554 Soluble ligand binding domain IM40_07285 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily IM40_07285 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain IM40_07290 IPR036010 2Fe-2S ferredoxin-like superfamily IM40_07290 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal IM40_07290 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding IM40_07290 IPR010228 NADH:ubiquinone oxidoreductase, subunit G IM40_07290 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site IM40_07290 IPR006656 Molybdopterin oxidoreductase IM40_07290 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IM40_07290 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IM40_07295 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H IM40_07295 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site IM40_07300 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IM40_07300 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_07300 IPR010226 NADH-quinone oxidoreductase, chain I IM40_07305 IPR011701 Major facilitator superfamily IM40_07305 IPR036259 MFS transporter superfamily IM40_07305 IPR020846 Major facilitator superfamily domain IM40_07305 IPR004638 Drug resistance transporter EmrB-like IM40_07385 IPR036318 FAD-binding, type PCMH-like superfamily IM40_07385 IPR002550 CNNM, transmembrane domain IM40_07385 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_07385 IPR005170 Transporter-associated domain IM40_07385 IPR000644 CBS domain IM40_07410 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IM40_07410 IPR001036 Acriflavin resistance protein IM40_07425 IPR000045 Prepilin type IV endopeptidase, peptidase domain IM40_07425 IPR014032 Peptidase A24A, prepilin type IV, bacterial IM40_07425 IPR010627 Peptidase A24A, N-terminal IM40_07440 IPR036249 Thioredoxin-like superfamily IM40_07440 IPR012336 Thioredoxin-like fold IM40_07440 IPR013766 Thioredoxin domain IM40_07450 IPR017871 ABC transporter, conserved site IM40_07450 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07450 IPR003593 AAA+ ATPase domain IM40_07450 IPR011527 ABC transporter type 1, transmembrane domain IM40_07450 IPR036640 ABC transporter type 1, transmembrane domain superfamily IM40_07450 IPR003439 ABC transporter-like IM40_07470 IPR008909 DALR anticodon binding IM40_07470 IPR035684 Arginyl-tRNA synthetase, catalytic core domain IM40_07470 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily IM40_07470 IPR005148 Arginyl tRNA synthetase N-terminal domain IM40_07470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_07470 IPR001278 Arginine-tRNA ligase IM40_07470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_07470 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IM40_07510 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_07510 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IM40_07510 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IM40_07510 IPR002313 Lysine-tRNA ligase, class II IM40_07510 IPR012340 Nucleic acid-binding, OB-fold IM40_07510 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal IM40_07520 IPR012080 Aspartate-semialdehyde dehydrogenase IM40_07520 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type IM40_07520 IPR012280 Semialdehyde dehydrogenase, dimerisation domain IM40_07520 IPR000534 Semialdehyde dehydrogenase, NAD-binding IM40_07520 IPR036291 NAD(P)-binding domain superfamily IM40_07530 IPR008141 Alanine dehydrogenase IM40_07530 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IM40_07530 IPR036291 NAD(P)-binding domain superfamily IM40_07530 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IM40_07530 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IM40_07565 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IM40_07565 IPR029056 Ribokinase-like IM40_07565 IPR002139 Ribokinase/fructokinase IM40_07565 IPR011611 Carbohydrate kinase PfkB IM40_07565 IPR011877 Ribokinase IM40_07575 IPR012724 Chaperone DnaJ IM40_07575 IPR002939 Chaperone DnaJ, C-terminal IM40_07575 IPR001623 DnaJ domain IM40_07575 IPR001305 Heat shock protein DnaJ, cysteine-rich domain IM40_07575 IPR008971 HSP40/DnaJ peptide-binding IM40_07575 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IM40_07575 IPR036869 Chaperone J-domain superfamily IM40_07575 IPR018253 DnaJ domain, conserved site IM40_07585 IPR000644 CBS domain IM40_07585 IPR005170 Transporter-associated domain IM40_07585 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_07585 IPR036318 FAD-binding, type PCMH-like superfamily IM40_07585 IPR002550 CNNM, transmembrane domain IM40_07595 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07595 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IM40_07595 IPR005665 Protein-export membrane protein SecF, bacterial IM40_07595 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IM40_07595 IPR000731 Sterol-sensing domain IM40_07600 IPR001036 Acriflavin resistance protein IM40_07600 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07600 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IM40_07600 IPR005791 Protein translocase subunit SecD IM40_07605 IPR003849 Preprotein translocase YajC IM40_07615 IPR030048 Survival protein SurE IM40_07615 IPR002828 Survival protein SurE-like phosphatase/nucleotidase IM40_07615 IPR036523 SurE-like phosphatase/nucleotidase superfamily IM40_07620 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily IM40_07620 IPR033729 Serine-tRNA ligase catalytic core domain IM40_07620 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IM40_07620 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IM40_07620 IPR006195 Aminoacyl-tRNA synthetase, class II IM40_07620 IPR002317 Serine-tRNA ligase, type1 IM40_07620 IPR015866 Serine-tRNA synthetase, type1, N-terminal IM40_07640 IPR008915 Peptidase M50 IM40_07650 IPR000361 FeS cluster biogenesis IM40_07650 IPR016092 FeS cluster insertion protein IM40_07650 IPR017870 FeS cluster insertion, C-terminal, conserved site IM40_07650 IPR023063 FeS cluster insertion protein ErpA IM40_07650 IPR035903 HesB-like domain superfamily IM40_07655 IPR004808 AP endonuclease 1 IM40_07655 IPR005135 Endonuclease/exonuclease/phosphatase IM40_07655 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IM40_07655 IPR020848 AP endonuclease 1, conserved site IM40_07655 IPR037493 Exodeoxyribonuclease III-like IM40_07655 IPR020847 AP endonuclease 1, binding site IM40_07660 IPR006249 Aconitase/Iron-responsive element-binding protein 2 IM40_07660 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IM40_07660 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IM40_07660 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IM40_07660 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IM40_07660 IPR036008 Aconitase, iron-sulfur domain IM40_07660 IPR018136 Aconitase family, 4Fe-4S cluster binding site IM40_07675 IPR000620 EamA domain IM40_07690 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 IPR020904 Short-chain dehydrogenase/reductase, conserved site IM40_07690 IPR036291 NAD(P)-binding domain superfamily IM40_07690 IPR011294 3-hydroxybutyrate dehydrogenase IM40_07695 IPR036034 PDZ superfamily IM40_07695 IPR041489 PDZ domain 6 IM40_07695 IPR001478 PDZ domain IM40_07695 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase IM40_07695 IPR008915 Peptidase M50 IM40_07700 IPR000184 Bacterial surface antigen (D15) IM40_07700 IPR039910 Surface antigen D15-like IM40_07700 IPR010827 POTRA domain, BamA/TamA-like IM40_07700 IPR023707 Outer membrane protein assembly factor BamA IM40_07700 IPR034746 POTRA domain IM40_07710 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD IM40_07710 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region IM40_07710 IPR011004 Trimeric LpxA-like superfamily IM40_07710 IPR018357 Hexapeptide transferase, conserved site IM40_07710 IPR001451 Hexapeptide repeat IM40_07715 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ IM40_07715 IPR029069 HotDog domain superfamily IM40_07715 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IM40_07720 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily IM40_07720 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal IM40_07720 IPR011004 Trimeric LpxA-like superfamily IM40_07720 IPR001451 Hexapeptide repeat IM40_07720 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase IM40_07720 IPR018357 Hexapeptide transferase, conserved site IM40_07725 IPR041255 LpxI N-terminal domain IM40_07725 IPR010415 LpxI, C-terminal IM40_07730 IPR003835 Glycosyl transferase, family 19 IM40_07735 IPR022369 Integral membrane protein TerC, riboswitch-linked IM40_07735 IPR005496 Integral membrane protein TerC IM40_07760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_07760 IPR002300 Aminoacyl-tRNA synthetase, class Ia IM40_07760 IPR033705 Valyl tRNA synthetase, anticodon-binding domain IM40_07760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_07760 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IM40_07760 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IM40_07760 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IM40_07760 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm IM40_07760 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IM40_07760 IPR002303 Valine-tRNA ligase IM40_07760 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IM40_07765 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site IM40_07765 IPR005982 Thioredoxin reductase IM40_07765 IPR023753 FAD/NAD(P)-binding domain IM40_07765 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07785 IPR003416 MgtC/SapB/SrpB/YhiD family IM40_07790 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB IM40_07790 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IM40_07790 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IM40_07815 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase IM40_07815 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase IM40_07815 IPR016084 Haem oxygenase-like, multi-helical IM40_07815 IPR004305 Thiaminase-2/PQQC IM40_07815 IPR036206 Thiamin phosphate synthase superfamily IM40_07815 IPR022998 Thiamine phosphate synthase/TenI IM40_07815 IPR029056 Ribokinase-like IM40_07815 IPR013785 Aldolase-type TIM barrel IM40_07815 IPR034291 Thiamine phosphate synthase IM40_07915 IPR009649 TraU IM40_08125 IPR036597 Fido-like domain superfamily IM40_08125 IPR040198 Fido domain-containing protein IM40_08125 IPR041657 Helix-turn-helix domain, group 17 IM40_08125 IPR010093 SinI-like, DNA-binding domain IM40_08125 IPR003812 Fido domain IM40_08155 IPR003738 SOS response associated peptidase (SRAP) IM40_08155 IPR036590 SOS response associated peptidase-like IM40_08185 IPR005119 LysR, substrate-binding IM40_08185 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain IM40_08185 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08185 IPR000847 Transcription regulator HTH, LysR IM40_08185 IPR036390 Winged helix DNA-binding domain superfamily IM40_08215 IPR027785 UvrD-like helicase C-terminal domain IM40_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08215 IPR029493 RecD helicase-like helix-hairpin-helix domain IM40_08215 IPR041451 RecD-like DNA helicase, SH3 domain IM40_08215 IPR006345 RecD-like DNA helicase IM40_08215 IPR003593 AAA+ ATPase domain IM40_08250 IPR014136 Ti-type conjugative transfer relaxase TraA IM40_08250 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08250 IPR005053 MobA/MobL protein IM40_08250 IPR041533 Bartonella effector protein, BID domain IM40_08250 IPR027351 (+) RNA virus helicase core domain IM40_08285 IPR002513 Tn3 transposase DDE domain IM40_08285 IPR025296 Domain of unknown function DUF4158 IM40_08335 IPR002716 PIN domain IM40_08335 IPR029060 PIN-like domain superfamily IM40_08335 IPR022907 VapC family IM40_08345 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_08345 IPR003346 Transposase, IS116/IS110/IS902 IM40_08360 IPR003346 Transposase, IS116/IS110/IS902 IM40_08360 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_08390 IPR025157 Hemagglutinin repeat IM40_08390 IPR008638 Filamentous haemagglutinin, N-terminal IM40_08390 IPR006473 Peptidase C58, YopT-type domain IM40_08390 IPR036597 Fido-like domain superfamily IM40_08390 IPR038765 Papain-like cysteine peptidase superfamily IM40_08390 IPR012334 Pectin lyase fold IM40_08390 IPR024973 ESPR domain IM40_08390 IPR003812 Fido domain IM40_08390 IPR040198 Fido domain-containing protein IM40_08390 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen IM40_08390 IPR011050 Pectin lyase fold/virulence factor IM40_08395 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IM40_08395 IPR023214 HAD superfamily IM40_08395 IPR041492 Haloacid dehalogenase-like hydrolase IM40_08395 IPR006439 HAD hydrolase, subfamily IA IM40_08395 IPR036412 HAD-like superfamily IM40_08405 IPR036291 NAD(P)-binding domain superfamily IM40_08405 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08460 IPR001736 Phospholipase D/Transphosphatidylase IM40_08460 IPR025202 Phospholipase D-like domain IM40_08485 IPR036590 SOS response associated peptidase-like IM40_08485 IPR003738 SOS response associated peptidase (SRAP) IM40_08565 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_08565 IPR003346 Transposase, IS116/IS110/IS902 IM40_08595 IPR023171 Na/H antiporter domain superfamily IM40_08595 IPR004670 Na+/H+ antiporter NhaA IM40_08605 IPR001584 Integrase, catalytic core IM40_08605 IPR025948 HTH-like domain IM40_08605 IPR012337 Ribonuclease H-like superfamily IM40_08605 IPR036397 Ribonuclease H superfamily IM40_08610 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IM40_08610 IPR023165 rRNA adenine dimethylase-like IM40_08610 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal IM40_08610 IPR011530 Ribosomal RNA adenine dimethylase IM40_08610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_08610 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site IM40_08615 IPR015391 SurA N-terminal IM40_08615 IPR023034 Peptidyl-prolyl isomerase SurA IM40_08615 IPR027304 Trigger factor/SurA domain superfamily IM40_08615 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IM40_08615 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site IM40_08630 IPR020889 LPS-assembly protein LptD IM40_08630 IPR005653 Organic solvent tolerance-like, N-terminal IM40_08630 IPR007543 LptD, C-terminal IM40_08635 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IM40_08635 IPR001296 Glycosyl transferase, family 1 IM40_08640 IPR026019 Ribulose-phosphate 3-epimerase IM40_08640 IPR013785 Aldolase-type TIM barrel IM40_08640 IPR000056 Ribulose-phosphate 3-epimerase-like IM40_08640 IPR011060 Ribulose-phosphate binding barrel IM40_08650 IPR036259 MFS transporter superfamily IM40_08650 IPR020846 Major facilitator superfamily domain IM40_08650 IPR011701 Major facilitator superfamily IM40_08650 IPR004812 Drug resistance transporter Bcr/CmlA subfamily IM40_08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08670 IPR003758 Tetraacyldisaccharide 4'-kinase IM40_08675 IPR039901 3-deoxy-D-manno-octulosonic acid transferase IM40_08675 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily IM40_08675 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal IM40_08685 IPR017871 ABC transporter, conserved site IM40_08685 IPR011527 ABC transporter type 1, transmembrane domain IM40_08685 IPR036640 ABC transporter type 1, transmembrane domain superfamily IM40_08685 IPR003439 ABC transporter-like IM40_08685 IPR011917 ABC transporter, lipid A export, MsbA IM40_08685 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08685 IPR039421 Type I protein exporter IM40_08685 IPR003593 AAA+ ATPase domain IM40_08715 IPR020103 Pseudouridine synthase, catalytic domain superfamily IM40_08715 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IM40_08715 IPR006145 Pseudouridine synthase, RsuA/RluA IM40_08715 IPR002942 RNA-binding S4 domain IM40_08715 IPR036986 RNA-binding S4 domain superfamily IM40_08720 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IM40_08720 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative IM40_08720 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IM40_08720 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IM40_08720 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IM40_08720 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IM40_08720 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IM40_08725 IPR037278 ARFGAP/RecO-like zinc finger IM40_08725 IPR003717 Recombination protein O, RecO IM40_08725 IPR012340 Nucleic acid-binding, OB-fold IM40_08725 IPR022572 DNA replication/recombination mediator RecO, N-terminal IM40_08730 IPR005119 LysR, substrate-binding IM40_08730 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08730 IPR000847 Transcription regulator HTH, LysR IM40_08730 IPR036390 Winged helix DNA-binding domain superfamily IM40_08735 IPR019833 Manganese/iron superoxide dismutase, binding site IM40_08735 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily IM40_08735 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily IM40_08735 IPR001189 Manganese/iron superoxide dismutase IM40_08735 IPR019832 Manganese/iron superoxide dismutase, C-terminal IM40_08735 IPR019831 Manganese/iron superoxide dismutase, N-terminal IM40_08750 IPR035461 GmhA/DiaA IM40_08750 IPR004515 Phosphoheptose isomerase IM40_08750 IPR001347 Sugar isomerase (SIS) IM40_08755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_08755 IPR029056 Ribokinase-like IM40_08755 IPR011914 RfaE bifunctional protein, domain II IM40_08755 IPR011913 RfaE bifunctional protein, domain I IM40_08755 IPR011611 Carbohydrate kinase PfkB IM40_08755 IPR004821 Cytidyltransferase-like domain IM40_08755 IPR023030 Bifunctional protein HldE IM40_08815 IPR002293 Amino acid/polyamine transporter I IM40_08875 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IM40_08875 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IM40_08875 IPR006531 Gp5 N-terminal IM40_08875 IPR032074 Actin cross-linking domain IM40_08875 IPR037026 Vgr protein, OB-fold domain superfamily IM40_08880 IPR022569 Ferredoxin, C-terminal IM40_08880 IPR000813 7Fe ferredoxin IM40_08880 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_08880 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IM40_08885 IPR004391 Glutamate racemase IM40_08885 IPR033134 Asp/Glu racemase, active site 2 IM40_08885 IPR018187 Asp/Glu racemase, active site 1 IM40_08885 IPR001920 Asp/Glu racemase IM40_08885 IPR015942 Asp/Glu/hydantoin racemase IM40_08895 IPR022337 Inositol monophosphatase, SuhB IM40_08895 IPR020550 Inositol monophosphatase, conserved site IM40_08895 IPR000760 Inositol monophosphatase-like IM40_08895 IPR020583 Inositol monophosphatase, metal-binding site IM40_08895 IPR033942 Inositol monophosphatase IM40_08900 IPR013852 Translation elongation factor P/YeiP, conserved site IM40_08900 IPR013185 Translation elongation factor, KOW-like IM40_08900 IPR001059 Translation elongation factor P/YeiP, central IM40_08900 IPR020599 Translation elongation factor P/YeiP IM40_08900 IPR015365 Elongation factor P, C-terminal IM40_08900 IPR008991 Translation protein SH3-like domain superfamily IM40_08900 IPR014722 Ribosomal protein L2, domain 2 IM40_08900 IPR012340 Nucleic acid-binding, OB-fold IM40_08900 IPR011768 Translation elongation factor P IM40_08925 IPR004027 SEC-C motif IM40_08925 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08925 IPR036670 SecA, preprotein cross-linking domain superfamily IM40_08925 IPR036266 SecA, Wing/Scaffold superfamily IM40_08925 IPR000185 Protein translocase subunit SecA IM40_08925 IPR011130 SecA, preprotein cross-linking domain IM40_08925 IPR014018 SecA motor DEAD IM40_08925 IPR011115 SecA DEAD-like, N-terminal IM40_08925 IPR020937 SecA conserved site IM40_08925 IPR011116 SecA Wing/Scaffold IM40_08950 IPR029062 Class I glutamine amidotransferase-like IM40_08950 IPR017926 Glutamine amidotransferase IM40_08950 IPR011697 Peptidase C26 IM40_08965 IPR021959 Protein of unknown function DUF3576 IM40_08970 IPR002300 Aminoacyl-tRNA synthetase, class Ia IM40_08970 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IM40_08970 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IM40_08970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_08970 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IM40_08970 IPR025709 Leucyl-tRNA synthetase, editing domain IM40_08970 IPR002302 Leucine-tRNA ligase IM40_08970 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IM40_08980 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase IM40_08980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IM40_08980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IM40_08980 IPR015424 Pyridoxal phosphate-dependent transferase IM40_08980 IPR004839 Aminotransferase, class I/classII IM40_08980 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IM40_08985 IPR000917 Sulfatase, N-terminal IM40_08985 IPR012549 Phosphoethanolamine transferase, N-terminal IM40_08985 IPR017850 Alkaline-phosphatase-like, core domain superfamily IM40_08985 IPR040423 Phosphoethanolamine transferase IM40_08990 IPR036945 Diacylglycerol kinase (DAGK) superfamily IM40_08990 IPR033718 Diacylglycerol kinase, prokaryotic IM40_08990 IPR000829 DAGK family IM40_09005 IPR036086 ParB/Sulfiredoxin superfamily IM40_09005 IPR004437 ParB/RepB/Spo0J partition protein IM40_09005 IPR003115 ParB/Sulfiredoxin IM40_09005 IPR041468 ParB/Spo0J, HTH domain IM40_09010 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09010 IPR025669 AAA domain IM40_09015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_09015 IPR003682 rRNA small subunit methyltransferase G IM40_09020 IPR004665 Transcription termination factor Rho IM40_09020 IPR011113 Rho termination factor, RNA-binding domain IM40_09020 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IM40_09020 IPR011129 Cold shock domain IM40_09020 IPR003593 AAA+ ATPase domain IM40_09020 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09020 IPR041703 Transcription termination factor Rho, ATP binding domain IM40_09020 IPR011112 Rho termination factor, N-terminal IM40_09020 IPR036269 Rho termination factor, N-terminal domain superfamily IM40_09020 IPR012340 Nucleic acid-binding, OB-fold IM40_09030 IPR033644 Ferrochelatase, C-terminal IM40_09030 IPR001015 Ferrochelatase IM40_09030 IPR019772 Ferrochelatase, active site IM40_09030 IPR033659 Ferrochelatase, N-terminal IM40_09035 IPR038071 UROD/MetE-like superfamily IM40_09035 IPR000257 Uroporphyrinogen decarboxylase (URO-D) IM40_09035 IPR006361 Uroporphyrinogen decarboxylase HemE IM40_09050 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09050 IPR001977 Dephospho-CoA kinase IM40_09055 IPR036397 Ribonuclease H superfamily IM40_09055 IPR012337 Ribonuclease H-like superfamily IM40_09055 IPR013520 Exonuclease, RNase T/DNA polymerase III IM40_09055 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IM40_09055 IPR006309 DNA polymerase 3, epsilon subunit IM40_09060 IPR003708 Bacterial protein export chaperone SecB IM40_09060 IPR035958 SecB-like superfamily IM40_09065 IPR032710 NTF2-like domain superfamily IM40_09065 IPR007379 Tim44-like domain IM40_09090 IPR036390 Winged helix DNA-binding domain superfamily IM40_09090 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_09090 IPR000847 Transcription regulator HTH, LysR IM40_09090 IPR005119 LysR, substrate-binding IM40_09090 IPR037408 HTH-type transcriptional regulator cbl, PBP2 domain IM40_09100 IPR004491 Heat shock protein HslU IM40_09100 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09100 IPR003959 ATPase, AAA-type, core IM40_09100 IPR003593 AAA+ ATPase domain IM40_09100 IPR019489 Clp ATPase, C-terminal IM40_09105 IPR023333 Proteasome B-type subunit IM40_09105 IPR001353 Proteasome, subunit alpha/beta IM40_09105 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_09105 IPR022281 ATP-dependent protease, HslV subunit IM40_09110 IPR011146 HIT-like domain IM40_09110 IPR019808 Histidine triad, conserved site IM40_09110 IPR036265 HIT-like superfamily IM40_09110 IPR001310 Histidine triad (HIT) protein IM40_09115 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09115 IPR023753 FAD/NAD(P)-binding domain IM40_09115 IPR017938 Riboflavin synthase-like beta-barrel IM40_09120 IPR002502 N-acetylmuramoyl-L-alanine amidase domain IM40_09120 IPR036366 PGBD superfamily IM40_09120 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily IM40_09120 IPR036365 PGBD-like superfamily IM40_09155 IPR003509 Uncharacterised protein family UPF0102 IM40_09155 IPR011335 Restriction endonuclease type II-like IM40_09155 IPR011856 tRNA endonuclease-like domain superfamily IM40_09165 IPR011761 ATP-grasp fold IM40_09165 IPR006284 Glutathione synthetase, prokaryotic IM40_09165 IPR004218 Prokaryotic glutathione synthetase, ATP-binding IM40_09165 IPR004215 Prokaryotic glutathione synthetase, N-terminal IM40_09165 IPR016185 Pre-ATP-grasp domain superfamily IM40_09165 IPR013815 ATP-grasp fold, subdomain 1 IM40_09175 IPR025158 Mg chelatase-related protein, C-terminal domain IM40_09175 IPR004482 Mg chelatase-related protein IM40_09175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_09175 IPR001208 MCM domain IM40_09175 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_09175 IPR003593 AAA+ ATPase domain IM40_09175 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09175 IPR000523 Magnesium chelatase ChlI domain IM40_09185 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IM40_09185 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit IM40_09185 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site IM40_09185 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit IM40_09195 IPR011281 Succinate dehydrogenase, flavoprotein subunit IM40_09195 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IM40_09195 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IM40_09195 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IM40_09195 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IM40_09195 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit IM40_09195 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site IM40_09195 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09200 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal IM40_09200 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein IM40_09200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IM40_09200 IPR009051 Alpha-helical ferredoxin IM40_09200 IPR012675 Beta-grasp domain superfamily IM40_09200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_09200 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IM40_09200 IPR036010 2Fe-2S ferredoxin-like superfamily IM40_09200 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IM40_09210 IPR036510 Ribosomal protein S20 superfamily IM40_09210 IPR002583 Ribosomal protein S20 IM40_09265 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI IM40_09265 IPR042217 Type IV secretion system, VirB10/TrbI IM40_09275 IPR003593 AAA+ ATPase domain IM40_09275 IPR014155 Type IV secretion system protein VirB11 IM40_09275 IPR001482 Type II/IV secretion system protein IM40_09275 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09285 IPR003688 Type IV secretion system protein TraG/VirD4 IM40_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09300 IPR027351 (+) RNA virus helicase core domain IM40_09300 IPR041533 Bartonella effector protein, BID domain IM40_09300 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09300 IPR014136 Ti-type conjugative transfer relaxase TraA IM40_09300 IPR005053 MobA/MobL protein IM40_09335 IPR006842 Transposase (putative), YhgA-like IM40_09335 IPR010106 Recombination-promoting nuclease RpnA IM40_09340 IPR036286 LexA/Signal peptidase-like superfamily IM40_09340 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_09340 IPR039418 LexA-like IM40_09340 IPR006197 Peptidase S24, LexA-like IM40_09345 IPR025188 Domain of unknown function DUF4113 IM40_09345 IPR024728 DNA polymerase type-Y, HhH motif IM40_09345 IPR001126 UmuC domain IM40_09345 IPR017961 DNA polymerase, Y-family, little finger domain IM40_09345 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IM40_09365 IPR009362 YhcG PDDEXK nuclease domain IM40_09365 IPR041527 YhcG, N-terminal IM40_09370 IPR025296 Domain of unknown function DUF4158 IM40_09370 IPR002513 Tn3 transposase DDE domain IM40_09375 IPR002104 Integrase, catalytic domain IM40_09375 IPR010998 Integrase/recombinase, N-terminal IM40_09375 IPR013762 Integrase-like, catalytic domain superfamily IM40_09375 IPR011010 DNA breaking-rejoining enzyme, catalytic core IM40_09375 IPR004107 Integrase, SAM-like, N-terminal IM40_09425 IPR001387 Cro/C1-type helix-turn-helix domain IM40_09425 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IM40_09425 IPR013430 Toxin-antitoxin system, antidote protein, HigA IM40_09440 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_09440 IPR003346 Transposase, IS116/IS110/IS902 IM40_09455 IPR009057 Homeobox-like domain superfamily IM40_09455 IPR002514 Transposase IS3/IS911family IM40_09520 IPR012337 Ribonuclease H-like superfamily IM40_09520 IPR036397 Ribonuclease H superfamily IM40_09520 IPR001584 Integrase, catalytic core IM40_09520 IPR025948 HTH-like domain IM40_09570 IPR035089 Tail sheath protein, subtilisin-like domain IM40_09570 IPR020287 Tail sheath protein, C-terminal domain IM40_09620 IPR041527 YhcG, N-terminal IM40_09620 IPR009362 YhcG PDDEXK nuclease domain IM40_09640 IPR017894 HTH domain, IS21 transposase-type IM40_09640 IPR001584 Integrase, catalytic core IM40_09640 IPR012337 Ribonuclease H-like superfamily IM40_09640 IPR036397 Ribonuclease H superfamily IM40_09640 IPR006120 Resolvase, HTH domain IM40_09645 IPR001270 ClpA/B family IM40_09645 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09645 IPR002611 IstB-like ATP-binding protein IM40_09645 IPR003593 AAA+ ATPase domain IM40_09645 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_09690 IPR032806 H repeat-associated protein, N-terminal IM40_09690 IPR002559 Transposase, IS4-like IM40_09695 IPR006120 Resolvase, HTH domain IM40_09695 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IM40_09695 IPR006118 Recombinase, conserved site IM40_09695 IPR009057 Homeobox-like domain superfamily IM40_09695 IPR006119 Resolvase, N-terminal catalytic domain IM40_09740 IPR006120 Resolvase, HTH domain IM40_09740 IPR006119 Resolvase, N-terminal catalytic domain IM40_09740 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IM40_09740 IPR006118 Recombinase, conserved site IM40_09755 IPR000477 Reverse transcriptase domain IM40_09765 IPR003346 Transposase, IS116/IS110/IS902 IM40_09765 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_09835 IPR000119 Histone-like DNA-binding protein IM40_09835 IPR020816 Histone-like DNA-binding protein, conserved site IM40_09835 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_09850 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09850 IPR009744 VirC1 IM40_09890 IPR000847 Transcription regulator HTH, LysR IM40_09890 IPR036390 Winged helix DNA-binding domain superfamily IM40_09890 IPR005119 LysR, substrate-binding IM40_09890 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_09950 IPR008271 Serine/threonine-protein kinase, active site IM40_09950 IPR000719 Protein kinase domain IM40_09950 IPR017441 Protein kinase, ATP binding site IM40_09950 IPR011009 Protein kinase-like domain superfamily IM40_09950 IPR005543 PASTA domain IM40_09980 IPR020816 Histone-like DNA-binding protein, conserved site IM40_09980 IPR000119 Histone-like DNA-binding protein IM40_09980 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_09990 IPR025669 AAA domain IM40_09990 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10025 IPR005119 LysR, substrate-binding IM40_10025 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_10025 IPR000847 Transcription regulator HTH, LysR IM40_10025 IPR036390 Winged helix DNA-binding domain superfamily IM40_10085 IPR042217 Type IV secretion system, VirB10/TrbI IM40_10085 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI IM40_10095 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10095 IPR001482 Type II/IV secretion system protein IM40_10095 IPR014155 Type IV secretion system protein VirB11 IM40_10140 IPR014136 Ti-type conjugative transfer relaxase TraA IM40_10140 IPR027351 (+) RNA virus helicase core domain IM40_10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10140 IPR041533 Bartonella effector protein, BID domain IM40_10140 IPR005053 MobA/MobL protein IM40_10170 IPR006842 Transposase (putative), YhgA-like IM40_10170 IPR010106 Recombination-promoting nuclease RpnA IM40_10175 IPR017961 DNA polymerase, Y-family, little finger domain IM40_10175 IPR025188 Domain of unknown function DUF4113 IM40_10175 IPR024728 DNA polymerase type-Y, HhH motif IM40_10175 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IM40_10175 IPR001126 UmuC domain IM40_10180 IPR006197 Peptidase S24, LexA-like IM40_10180 IPR039418 LexA-like IM40_10180 IPR036286 LexA/Signal peptidase-like superfamily IM40_10180 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_10200 IPR011006 CheY-like superfamily IM40_10200 IPR016032 Signal transduction response regulator, C-terminal effector IM40_10200 IPR001789 Signal transduction response regulator, receiver domain IM40_10200 IPR000792 Transcription regulator LuxR, C-terminal IM40_10230 IPR009057 Homeobox-like domain superfamily IM40_10230 IPR002514 Transposase IS3/IS911family IM40_10245 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IM40_10245 IPR006120 Resolvase, HTH domain IM40_10245 IPR009057 Homeobox-like domain superfamily IM40_10245 IPR006119 Resolvase, N-terminal catalytic domain IM40_10245 IPR006118 Recombinase, conserved site IM40_10285 IPR009057 Homeobox-like domain superfamily IM40_10285 IPR002514 Transposase IS3/IS911family IM40_10295 IPR032874 DDE domain IM40_10295 IPR036397 Ribonuclease H superfamily IM40_10295 IPR012337 Ribonuclease H-like superfamily IM40_10295 IPR001584 Integrase, catalytic core IM40_10305 IPR003346 Transposase, IS116/IS110/IS902 IM40_10305 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_10310 IPR001584 Integrase, catalytic core IM40_10310 IPR012337 Ribonuclease H-like superfamily IM40_10310 IPR032874 DDE domain IM40_10310 IPR036397 Ribonuclease H superfamily IM40_10340 IPR005543 PASTA domain IM40_10340 IPR011009 Protein kinase-like domain superfamily IM40_10340 IPR000719 Protein kinase domain IM40_10340 IPR017441 Protein kinase, ATP binding site IM40_10340 IPR008271 Serine/threonine-protein kinase, active site IM40_10360 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_10360 IPR003346 Transposase, IS116/IS110/IS902 IM40_10395 IPR013430 Toxin-antitoxin system, antidote protein, HigA IM40_10395 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IM40_10395 IPR001387 Cro/C1-type helix-turn-helix domain IM40_10435 IPR013346 Ribonucleotide reductase, class I , alpha subunit IM40_10435 IPR005144 ATP-cone domain IM40_10435 IPR013509 Ribonucleotide reductase large subunit, N-terminal IM40_10435 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal IM40_10435 IPR039718 Ribonucleoside-diphosphate reductase large subunit IM40_10435 IPR000788 Ribonucleotide reductase large subunit, C-terminal IM40_10465 IPR032874 DDE domain IM40_10465 IPR001584 Integrase, catalytic core IM40_10465 IPR036397 Ribonuclease H superfamily IM40_10465 IPR012337 Ribonuclease H-like superfamily IM40_10495 IPR012337 Ribonuclease H-like superfamily IM40_10495 IPR036397 Ribonuclease H superfamily IM40_10495 IPR001584 Integrase, catalytic core IM40_10495 IPR032874 DDE domain IM40_10585 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10585 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IM40_10615 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_10615 IPR020816 Histone-like DNA-binding protein, conserved site IM40_10615 IPR000119 Histone-like DNA-binding protein IM40_10670 IPR006119 Resolvase, N-terminal catalytic domain IM40_10670 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IM40_10670 IPR006120 Resolvase, HTH domain IM40_10670 IPR006118 Recombinase, conserved site IM40_10670 IPR009057 Homeobox-like domain superfamily IM40_10685 IPR002514 Transposase IS3/IS911family IM40_10685 IPR009057 Homeobox-like domain superfamily IM40_10715 IPR000792 Transcription regulator LuxR, C-terminal IM40_10715 IPR011006 CheY-like superfamily IM40_10715 IPR001789 Signal transduction response regulator, receiver domain IM40_10715 IPR016032 Signal transduction response regulator, C-terminal effector IM40_10720 IPR012337 Ribonuclease H-like superfamily IM40_10720 IPR001584 Integrase, catalytic core IM40_10720 IPR036397 Ribonuclease H superfamily IM40_10720 IPR032874 DDE domain IM40_10730 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_10730 IPR003346 Transposase, IS116/IS110/IS902 IM40_10755 IPR039418 LexA-like IM40_10755 IPR036286 LexA/Signal peptidase-like superfamily IM40_10755 IPR006197 Peptidase S24, LexA-like IM40_10755 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_10760 IPR001126 UmuC domain IM40_10760 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IM40_10760 IPR025188 Domain of unknown function DUF4113 IM40_10760 IPR017961 DNA polymerase, Y-family, little finger domain IM40_10765 IPR002514 Transposase IS3/IS911family IM40_10765 IPR009057 Homeobox-like domain superfamily IM40_10800 IPR008353 Peptidase S1B, exfoliative toxin IM40_10800 IPR000126 Serine proteases, V8 family, serine active site IM40_10800 IPR009003 Peptidase S1, PA clan IM40_10800 IPR008256 Peptidase S1B IM40_10820 IPR002611 IstB-like ATP-binding protein IM40_10820 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10820 IPR003593 AAA+ ATPase domain IM40_10820 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_10820 IPR001270 ClpA/B family IM40_10825 IPR017894 HTH domain, IS21 transposase-type IM40_10825 IPR006120 Resolvase, HTH domain IM40_10825 IPR001584 Integrase, catalytic core IM40_10825 IPR012337 Ribonuclease H-like superfamily IM40_10825 IPR036397 Ribonuclease H superfamily IM40_10845 IPR041451 RecD-like DNA helicase, SH3 domain IM40_10845 IPR003593 AAA+ ATPase domain IM40_10845 IPR006345 RecD-like DNA helicase IM40_10845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10845 IPR027785 UvrD-like helicase C-terminal domain IM40_10845 IPR029493 RecD helicase-like helix-hairpin-helix domain IM40_10850 IPR032874 DDE domain IM40_10850 IPR001584 Integrase, catalytic core IM40_10850 IPR012337 Ribonuclease H-like superfamily IM40_10850 IPR036397 Ribonuclease H superfamily IM40_10855 IPR025202 Phospholipase D-like domain IM40_10855 IPR001736 Phospholipase D/Transphosphatidylase IM40_10870 IPR017508 HipA, N-terminal subdomain 1 IM40_10870 IPR012893 HipA-like, C-terminal IM40_10950 IPR003593 AAA+ ATPase domain IM40_10950 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10950 IPR002611 IstB-like ATP-binding protein IM40_10950 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_10950 IPR001270 ClpA/B family IM40_10975 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_10975 IPR036286 LexA/Signal peptidase-like superfamily IM40_10975 IPR039418 LexA-like IM40_10975 IPR006197 Peptidase S24, LexA-like IM40_10980 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10980 IPR003593 AAA+ ATPase domain IM40_10980 IPR001270 ClpA/B family IM40_10980 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_10980 IPR002611 IstB-like ATP-binding protein IM40_10985 IPR017894 HTH domain, IS21 transposase-type IM40_10985 IPR001584 Integrase, catalytic core IM40_10985 IPR006120 Resolvase, HTH domain IM40_10985 IPR036397 Ribonuclease H superfamily IM40_10985 IPR012337 Ribonuclease H-like superfamily IM40_10995 IPR032874 DDE domain IM40_10995 IPR012337 Ribonuclease H-like superfamily IM40_10995 IPR001584 Integrase, catalytic core IM40_10995 IPR036397 Ribonuclease H superfamily IM40_11010 IPR001387 Cro/C1-type helix-turn-helix domain IM40_11010 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IM40_11010 IPR013430 Toxin-antitoxin system, antidote protein, HigA IM40_11070 IPR001584 Integrase, catalytic core IM40_11070 IPR032874 DDE domain IM40_11070 IPR012337 Ribonuclease H-like superfamily IM40_11070 IPR036397 Ribonuclease H superfamily IM40_11095 IPR007211 Protein of unknown function DUF378 IM40_11130 IPR025668 Transposase DDE domain IM40_11140 IPR003594 Histidine kinase/HSP90-like ATPase IM40_11140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_11140 IPR005467 Histidine kinase domain IM40_11140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IM40_11140 IPR013515 Phytochrome, central region IM40_11140 IPR001294 Phytochrome IM40_11140 IPR016132 Phytochrome chromophore attachment domain IM40_11140 IPR013654 PAS fold-2 IM40_11140 IPR029016 GAF-like domain superfamily IM40_11140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IM40_11140 IPR035965 PAS domain superfamily IM40_11140 IPR003018 GAF domain IM40_11170 IPR003346 Transposase, IS116/IS110/IS902 IM40_11170 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_11180 IPR000477 Reverse transcriptase domain IM40_11195 IPR003593 AAA+ ATPase domain IM40_11195 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11195 IPR001482 Type II/IV secretion system protein IM40_11195 IPR014155 Type IV secretion system protein VirB11 IM40_11205 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI IM40_11205 IPR042217 Type IV secretion system, VirB10/TrbI IM40_11285 IPR000620 EamA domain IM40_11310 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11310 IPR025669 AAA domain IM40_11320 IPR020816 Histone-like DNA-binding protein, conserved site IM40_11320 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IM40_11320 IPR000119 Histone-like DNA-binding protein IM40_11375 IPR002716 PIN domain IM40_11375 IPR029060 PIN-like domain superfamily IM40_11375 IPR022907 VapC family IM40_11375 IPR041705 VapC-like Sll0205 protein, PIN domain IM40_11410 IPR025668 Transposase DDE domain IM40_11430 IPR032874 DDE domain IM40_11430 IPR001584 Integrase, catalytic core IM40_11430 IPR036397 Ribonuclease H superfamily IM40_11430 IPR012337 Ribonuclease H-like superfamily IM40_11440 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal IM40_11440 IPR003346 Transposase, IS116/IS110/IS902 IM40_11450 IPR006842 Transposase (putative), YhgA-like IM40_11450 IPR010106 Recombination-promoting nuclease RpnA IM40_11480 IPR027351 (+) RNA virus helicase core domain IM40_11480 IPR041533 Bartonella effector protein, BID domain IM40_11480 IPR005053 MobA/MobL protein IM40_11480 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11480 IPR014136 Ti-type conjugative transfer relaxase TraA IM40_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11490 IPR003688 Type IV secretion system protein TraG/VirD4