IM40_03605 3634647cd9049e2ef0516d7c607a5cbe 195 PIRSF PIRSF000847 1 189 1.2E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 IM40_03605 3634647cd9049e2ef0516d7c607a5cbe 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 2.2E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IM40_03605 3634647cd9049e2ef0516d7c607a5cbe 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IM40_03605 3634647cd9049e2ef0516d7c607a5cbe 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 176 4.0E-43 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 IM40_03605 3634647cd9049e2ef0516d7c607a5cbe 195 Gene3D G3DSA:1.20.120.1760 4 175 2.5E-15 T 14-10-2018 IM40_05770 0f27f691fb764e7357f5344a27a65a2b 291 Gene3D G3DSA:1.10.10.10 1 91 6.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_05770 0f27f691fb764e7357f5344a27a65a2b 291 SUPERFAMILY SSF46785 1 111 1.66E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_05770 0f27f691fb764e7357f5344a27a65a2b 291 Gene3D G3DSA:3.40.190.290 93 290 5.0E-30 T 14-10-2018 IM40_05770 0f27f691fb764e7357f5344a27a65a2b 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_05770 0f27f691fb764e7357f5344a27a65a2b 291 Pfam PF03466 LysR substrate binding domain 96 290 5.9E-19 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_05770 0f27f691fb764e7357f5344a27a65a2b 291 SUPERFAMILY SSF53850 91 290 4.25E-24 T 14-10-2018 IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 PRINTS PR00625 DnaJ domain signature 129 147 1.6E-6 T 14-10-2018 IPR001623 DnaJ domain IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 PRINTS PR00625 DnaJ domain signature 147 162 1.6E-6 T 14-10-2018 IPR001623 DnaJ domain IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 PRINTS PR00625 DnaJ domain signature 164 184 1.6E-6 T 14-10-2018 IPR001623 DnaJ domain IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 Gene3D G3DSA:1.10.287.110 102 183 5.4E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 SUPERFAMILY SSF46565 108 181 6.41E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 Pfam PF00226 DnaJ domain 132 181 2.7E-12 T 14-10-2018 IPR001623 DnaJ domain IM40_07575 91a05993160bc3a398a928b33d5d36fe 184 SMART SM00271 97 184 3.6E-9 T 14-10-2018 IPR001623 DnaJ domain IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 Gene3D G3DSA:2.40.33.10 73 169 1.4E-163 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 214 240 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 241 265 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 62 78 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 266 290 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 310 326 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 291 309 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 PRINTS PR01050 Pyruvate kinase family signature 187 201 8.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 SUPERFAMILY SSF51621 2 340 9.77E-93 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 Gene3D G3DSA:3.20.20.60 5 332 1.4E-163 T 14-10-2018 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 SUPERFAMILY SSF52935 320 456 1.15E-30 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 456 4.5E-24 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 Gene3D G3DSA:3.40.1380.20 333 458 1.4E-163 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 4.3E-110 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 457 4.4E-148 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 IM40_06655 9ed4e4534e9ef5b33043ca5b5dcc703b 481 SUPERFAMILY SSF50800 73 168 4.19E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily IM40_09665 b09dd15d83627972fbf2a84d1e12a5fc 491 SUPERFAMILY SSF56112 136 428 1.24E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_01940 9714f508c7594e9360e9a420c76e444d 330 Gene3D G3DSA:2.70.170.10 99 204 3.5E-12 T 14-10-2018 IPR036734 Neurotransmitter-gated ion-channel ligand-binding domain superfamily GO:0005230|GO:0006811|GO:0016021 IM40_01940 9714f508c7594e9360e9a420c76e444d 330 SUPERFAMILY SSF63712 108 204 1.83E-5 T 14-10-2018 IPR036734 Neurotransmitter-gated ion-channel ligand-binding domain superfamily GO:0005230|GO:0006811|GO:0016021 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Gene3D G3DSA:1.25.40.10 745 978 2.2E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00421 31 88 1.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 827 860 73.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 1038 1071 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 996 1029 77.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 869 902 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 912 945 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 954 987 24.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SMART SM00028 785 818 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Gene3D G3DSA:1.10.10.10 3 94 1.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Gene3D G3DSA:1.25.40.10 979 1138 6.0E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Pfam PF13424 Tetratricopeptide repeat 999 1069 9.6E-9 T 14-10-2018 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Pfam PF13424 Tetratricopeptide repeat 915 981 1.9E-7 T 14-10-2018 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Pfam PF00196 Bacterial regulatory proteins, luxR family 34 87 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Pfam PF00931 NB-ARC domain 355 583 2.8E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SUPERFAMILY SSF48452 949 1089 7.59E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SUPERFAMILY SSF46894 22 88 7.14E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 Gene3D G3DSA:3.40.50.300 322 497 1.3E-19 T 14-10-2018 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SUPERFAMILY SSF52540 345 585 1.02E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 SUPERFAMILY SSF48452 746 941 8.53E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 48 64 9.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 34 48 9.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10715 4ed2f1b88bfb62923b474d42851b5c8c 1141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 64 76 9.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_07190 39f83b4567fb19318454358a13716bd9 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.2E-112 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 IM40_07190 39f83b4567fb19318454358a13716bd9 239 SUPERFAMILY SSF54211 1 181 3.8E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_07190 39f83b4567fb19318454358a13716bd9 239 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.232 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 IM40_07190 39f83b4567fb19318454358a13716bd9 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.3E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_07190 39f83b4567fb19318454358a13716bd9 239 SUPERFAMILY SSF55666 153 236 1.7E-21 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_07190 39f83b4567fb19318454358a13716bd9 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site IM40_07190 39f83b4567fb19318454358a13716bd9 239 Gene3D G3DSA:3.30.230.70 9 237 1.2E-58 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_07190 39f83b4567fb19318454358a13716bd9 239 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 2.5E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_08680 fd2690a2f6e7bd7abbaf649ef303cf17 234 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 25 136 4.0E-16 T 14-10-2018 IPR007172 Domain of unknown function DUF374 IM40_08680 fd2690a2f6e7bd7abbaf649ef303cf17 234 Pfam PF04028 Domain of unknown function (DUF374) 70 136 1.2E-24 T 14-10-2018 IPR007172 Domain of unknown function DUF374 IM40_05855 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF01548 Transposase 6 149 5.0E-27 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_05855 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 281 9.8E-27 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_10305 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF01548 Transposase 6 149 5.0E-27 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_10305 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 281 9.8E-27 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_08345 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF01548 Transposase 6 149 5.0E-27 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_08345 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 281 9.8E-27 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_10360 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF01548 Transposase 6 149 5.0E-27 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_10360 f8c380c0ffaf2f2820d1e7156b7fb438 325 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 281 9.8E-27 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 SUPERFAMILY SSF75625 299 385 4.32E-12 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 PRINTS PR01183 Ribonucleotide reductase large chain signature 278 297 2.1E-6 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 PRINTS PR01183 Ribonucleotide reductase large chain signature 548 570 2.1E-6 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 128 759 1.5E-141 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 Pfam PF02867 Ribonucleotide reductase, barrel domain 806 918 3.0E-16 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 SUPERFAMILY SSF51998 200 931 1.34E-122 T 14-10-2018 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 150 6.9E-41 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 Gene3D G3DSA:3.20.70.20 778 934 5.2E-29 T 14-10-2018 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 Gene3D G3DSA:3.20.70.20 382 777 1.1E-93 T 14-10-2018 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 Gene3D G3DSA:3.20.70.20 78 359 1.1E-59 T 14-10-2018 IM40_04390 6117f4a265b75db4a0a486d2aa92f586 1237 Pfam PF02867 Ribonucleotide reductase, barrel domain 201 754 8.4E-108 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_07650 8a801581ccced76b567d99752606738f 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 98 115 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 IM40_07650 8a801581ccced76b567d99752606738f 118 Gene3D G3DSA:2.60.300.12 12 118 5.4E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IM40_07650 8a801581ccced76b567d99752606738f 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 113 3.7E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 IM40_07650 8a801581ccced76b567d99752606738f 118 SUPERFAMILY SSF89360 12 106 1.57E-20 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IM40_07650 8a801581ccced76b567d99752606738f 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 117 1.5E-31 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 IM40_04690 9649eb9731e34252032a763c8ffcdb9b 464 SUPERFAMILY SSF52467 292 464 4.11E-76 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IM40_04690 9649eb9731e34252032a763c8ffcdb9b 464 Gene3D G3DSA:3.40.50.1220 286 464 1.5E-84 T 14-10-2018 IM40_04690 9649eb9731e34252032a763c8ffcdb9b 464 PIRSF PIRSF000204 1 464 1.3E-215 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 IM40_04690 9649eb9731e34252032a763c8ffcdb9b 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 461 8.0E-194 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 Gene3D G3DSA:3.30.420.40 13 331 6.5E-130 T 14-10-2018 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 Pfam PF06723 MreB/Mbl protein 11 339 2.1E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 Gene3D G3DSA:3.90.640.10 187 263 6.5E-130 T 14-10-2018 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 SUPERFAMILY SSF53067 10 149 2.88E-38 T 14-10-2018 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 Gene3D G3DSA:3.30.420.40 155 321 6.5E-130 T 14-10-2018 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 4.6E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 4.6E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 4.6E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 4.6E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 4.6E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 SUPERFAMILY SSF53067 150 334 1.09E-46 T 14-10-2018 IM40_05335 8ae1f8efdeddac97d9879492f1733ae9 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 340 1.7E-155 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 SUPERFAMILY SSF55979 1 118 6.28E-26 T 14-10-2018 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 Gene3D G3DSA:3.10.150.10 1 245 7.2E-116 T 14-10-2018 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 SUPERFAMILY SSF55979 127 247 1.02E-25 T 14-10-2018 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 246 3.3E-29 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 250 368 2.0E-30 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 368 1.4E-89 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 PIRSF PIRSF000804 1 369 2.9E-115 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 Gene3D G3DSA:3.70.10.10 139 367 7.2E-116 T 14-10-2018 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 SMART SM00480 17 365 4.5E-120 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 SUPERFAMILY SSF55979 249 369 1.34E-31 T 14-10-2018 IM40_00010 ae9035e96ec30ecf6260fefc79fe4193 369 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.7E-33 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 IM40_05350 732804454310c76700964a3daa9571e5 420 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 420 1.5E-165 T 14-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 IM40_05350 732804454310c76700964a3daa9571e5 420 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 193 419 2.5E-83 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 IM40_05350 732804454310c76700964a3daa9571e5 420 Pfam PF00364 Biotin-requiring enzyme 5 77 2.9E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment IM40_05350 732804454310c76700964a3daa9571e5 420 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IM40_05350 732804454310c76700964a3daa9571e5 420 SUPERFAMILY SSF51230 1 92 9.16E-28 T 14-10-2018 IPR011053 Single hybrid motif IM40_05350 732804454310c76700964a3daa9571e5 420 Gene3D G3DSA:3.30.559.10 179 417 1.8E-92 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_05350 732804454310c76700964a3daa9571e5 420 SUPERFAMILY SSF47005 126 170 1.57E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IM40_05350 732804454310c76700964a3daa9571e5 420 Gene3D G3DSA:2.40.50.100 2 99 2.9E-32 T 14-10-2018 IM40_05350 732804454310c76700964a3daa9571e5 420 Pfam PF02817 e3 binding domain 131 166 5.3E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 IM40_05350 732804454310c76700964a3daa9571e5 420 SUPERFAMILY SSF52777 193 419 9.34E-81 T 14-10-2018 IM40_05350 732804454310c76700964a3daa9571e5 420 Gene3D G3DSA:4.10.320.10 124 178 8.1E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IM40_00800 68529d704988d3da8d4bb10a1997078f 107 SMART SM00450 7 102 2.7E-22 T 14-10-2018 IPR001763 Rhodanese-like domain IM40_00800 68529d704988d3da8d4bb10a1997078f 107 Pfam PF00581 Rhodanese-like domain 8 97 1.2E-12 T 14-10-2018 IPR001763 Rhodanese-like domain IM40_00800 68529d704988d3da8d4bb10a1997078f 107 Gene3D G3DSA:3.40.250.10 3 101 6.1E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily IM40_00800 68529d704988d3da8d4bb10a1997078f 107 SUPERFAMILY SSF52821 2 104 3.54E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily IM40_00515 4a84a45ae3a5c845ba996f7c974fd23a 186 Pfam PF01923 Cobalamin adenosyltransferase 7 169 4.0E-59 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IM40_00515 4a84a45ae3a5c845ba996f7c974fd23a 186 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 181 6.9E-56 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IM40_00515 4a84a45ae3a5c845ba996f7c974fd23a 186 Gene3D G3DSA:1.20.1200.10 16 185 1.6E-57 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IM40_00515 4a84a45ae3a5c845ba996f7c974fd23a 186 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 27 180 1.0E-43 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IM40_00515 4a84a45ae3a5c845ba996f7c974fd23a 186 SUPERFAMILY SSF89028 5 181 1.02E-59 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 SUPERFAMILY SSF100934 502 600 2.62E-20 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 SUPERFAMILY SSF53067 4 184 3.02E-67 T 14-10-2018 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Gene3D G3DSA:2.60.34.10 378 518 3.7E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 9.9E-300 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Pfam PF00012 Hsp70 protein 4 598 8.4E-277 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Gene3D G3DSA:3.30.420.40 184 357 1.4E-164 T 14-10-2018 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 37.788 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Gene3D G3DSA:3.90.640.10 223 310 1.4E-164 T 14-10-2018 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 329 345 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 360 380 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 383 402 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 PRINTS PR00301 70kDa heat shock protein signature 464 480 3.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 SUPERFAMILY SSF53067 187 377 4.38E-68 T 14-10-2018 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Gene3D G3DSA:3.30.420.40 5 372 1.4E-164 T 14-10-2018 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Gene3D G3DSA:3.30.30.30 67 118 1.4E-164 T 14-10-2018 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 SUPERFAMILY SSF100920 379 535 9.68E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IM40_00200 dde52f9ab3a2fbaf023f73af5e48dc19 641 Gene3D G3DSA:1.20.1270.10 519 602 7.8E-28 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IM40_09150 05bbab4c48dd94b2a7110d37df1e293f 370 Gene3D G3DSA:3.40.50.2300 151 356 1.2E-38 T 14-10-2018 IM40_09150 05bbab4c48dd94b2a7110d37df1e293f 370 SUPERFAMILY SSF53822 44 366 4.04E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I IM40_09150 05bbab4c48dd94b2a7110d37df1e293f 370 Gene3D G3DSA:3.40.50.2300 44 351 1.2E-38 T 14-10-2018 IM40_09150 05bbab4c48dd94b2a7110d37df1e293f 370 Pfam PF13458 Periplasmic binding protein 44 362 1.8E-36 T 14-10-2018 IPR028081 Leucine-binding protein domain IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 SUPERFAMILY SSF50486 207 306 1.81E-28 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 Pfam PF02911 Formyl transferase, C-terminal domain 206 298 3.7E-24 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 301 35.889 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 Gene3D G3DSA:3.10.25.10 209 306 2.6E-25 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 SUPERFAMILY SSF53328 1 206 1.15E-65 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 299 2.3E-89 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 Pfam PF00551 Formyl transferase 5 181 1.1E-44 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IM40_01720 3a9b7d81b8445bf56da5d5afeae58115 317 Gene3D G3DSA:3.40.50.170 1 208 1.0E-81 T 14-10-2018 IM40_07145 d8233b25628701a7526a64057a911195 370 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 32 124 2.2E-6 T 14-10-2018 IPR018666 Protein of unknown function DUF2125 IM40_07145 d8233b25628701a7526a64057a911195 370 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 250 363 1.6E-18 T 14-10-2018 IPR018666 Protein of unknown function DUF2125 IM40_01435 8511fa69435cfafe0198431cb80af52a 222 Gene3D G3DSA:3.40.50.1000 7 184 1.3E-35 T 14-10-2018 IPR023214 HAD superfamily IM40_01435 8511fa69435cfafe0198431cb80af52a 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 117 181 7.8E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IM40_01435 8511fa69435cfafe0198431cb80af52a 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 182 2.8E-24 T 14-10-2018 IM40_01435 8511fa69435cfafe0198431cb80af52a 222 Gene3D G3DSA:1.10.150.240 19 81 1.3E-35 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IM40_01435 8511fa69435cfafe0198431cb80af52a 222 SUPERFAMILY SSF56784 4 209 2.62E-38 T 14-10-2018 IPR036412 HAD-like superfamily IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Gene3D G3DSA:3.40.1190.10 84 312 1.5E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 SUPERFAMILY SSF63418 7 98 4.19E-19 T 14-10-2018 IPR035911 MurE/MurF, N-terminal IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 402 4.7E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Pfam PF01225 Mur ligase family, catalytic domain 25 97 2.5E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 SUPERFAMILY SSF53623 103 305 1.31E-43 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 459 28.893 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 448 2.6E-106 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Pfam PF08245 Mur ligase middle domain 108 296 1.8E-37 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Gene3D G3DSA:3.90.190.20 322 470 1.5E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 Gene3D G3DSA:3.40.1390.10 2 77 3.7E-16 T 14-10-2018 IM40_02830 ea69b9dc0beabb6270c8b85864b7a8b4 475 SUPERFAMILY SSF53244 325 449 2.04E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 SUPERFAMILY SSF56731 2016 2138 4.18E-6 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 SUPERFAMILY SSF52540 409 570 4.33E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 SUPERFAMILY SSF57783 1830 1884 7.99E-6 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 SUPERFAMILY SSF52540 555 833 7.97E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Gene3D G3DSA:3.40.1360.10 2014 2134 4.3E-8 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Gene3D G3DSA:3.40.50.300 392 592 6.7E-39 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Gene3D G3DSA:3.40.50.300 593 806 6.7E-39 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Pfam PF03389 MobA/MobL family 107 180 1.9E-12 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Pfam PF03389 MobA/MobL family 18 79 9.4E-12 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Pfam PF03389 MobA/MobL family 183 232 2.4E-6 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Gene3D G3DSA:3.30.930.30 2 217 4.5E-36 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Pfam PF13604 AAA domain 413 624 1.2E-38 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Gene3D G3DSA:2.30.30.940 675 791 6.7E-39 T 14-10-2018 IM40_11480 336dc5aba46f466a2bd970ded61f6a01 2365 Pfam PF13362 Toprim domain 2027 2123 3.3E-12 T 14-10-2018 IPR006171 TOPRIM domain IM40_04325 db1a50127234a6c35a52f42b8691ee82 538 Pfam PF01471 Putative peptidoglycan binding domain 222 274 1.1E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like IM40_04325 db1a50127234a6c35a52f42b8691ee82 538 SUPERFAMILY SSF141523 299 458 3.53E-18 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like IM40_04325 db1a50127234a6c35a52f42b8691ee82 538 SUPERFAMILY SSF47090 219 282 2.01E-13 T 14-10-2018 IPR036365 PGBD-like superfamily IM40_04325 db1a50127234a6c35a52f42b8691ee82 538 Gene3D G3DSA:2.40.440.10 262 465 1.6E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like IM40_04325 db1a50127234a6c35a52f42b8691ee82 538 Pfam PF03734 L,D-transpeptidase catalytic domain 301 467 1.8E-26 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 334 1.8E-123 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 118 1.7E-27 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 Gene3D G3DSA:3.40.50.720 5 332 4.0E-130 T 14-10-2018 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 SUPERFAMILY SSF51735 3 158 3.52E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 PIRSF PIRSF000148 2 335 3.2E-115 T 14-10-2018 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 319 1.0E-48 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 Gene3D G3DSA:3.30.360.10 131 315 4.0E-130 T 14-10-2018 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 SUPERFAMILY SSF55347 130 320 1.08E-66 T 14-10-2018 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 SMART SM00859 4 120 1.3E-35 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IM40_07520 d19cc85ec52ef4a1714f22dc3db34fea 335 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 333 32.819 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 Gene3D G3DSA:3.40.50.12780 46 511 2.8E-103 T 14-10-2018 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 SUPERFAMILY SSF56801 10 638 2.22E-185 T 14-10-2018 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 Pfam PF00501 AMP-binding enzyme 80 518 9.3E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 Gene3D G3DSA:3.30.300.30 514 645 4.9E-30 T 14-10-2018 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 8 641 52.206 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 17 639 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 257 268 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 527 605 7.3E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_03180 dfc811a33423ed08e4226054578e0d0b 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 20 77 8.3E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Pfam PF14450 Cell division protein FtsA 200 369 2.9E-20 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Pfam PF02491 SHS2 domain inserted in FTSA 81 153 5.1E-13 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Gene3D G3DSA:3.90.640.10 227 295 8.5E-89 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 PIRSF PIRSF003101 1 408 7.8E-116 T 14-10-2018 IPR020823 Cell division protein FtsA IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 2 373 7.1E-101 T 14-10-2018 IPR020823 Cell division protein FtsA IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 SUPERFAMILY SSF53067 191 373 2.32E-35 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Gene3D G3DSA:3.30.420.40 5 366 8.5E-89 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 SMART SM00842 2 188 1.1E-56 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Gene3D G3DSA:3.30.1490.110 77 161 8.5E-89 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 SUPERFAMILY SSF53067 2 189 6.35E-40 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Pfam PF14450 Cell division protein FtsA 3 187 5.7E-9 T 14-10-2018 IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 408 22.818 T 14-10-2018 IPR020823 Cell division protein FtsA IM40_02875 d34c3f1b9a10293a8f3f4907592c979b 408 Gene3D G3DSA:3.30.420.40 189 347 8.5E-89 T 14-10-2018 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 Gene3D G3DSA:3.10.310.10 117 261 3.0E-80 T 14-10-2018 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 SUPERFAMILY SSF54506 3 128 4.51E-39 T 14-10-2018 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 Gene3D G3DSA:3.10.310.10 5 264 3.0E-80 T 14-10-2018 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 Pfam PF01678 Diaminopimelate epimerase 149 250 3.6E-21 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 Pfam PF01678 Diaminopimelate epimerase 5 120 1.2E-22 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 SUPERFAMILY SSF54506 139 266 1.03E-38 T 14-10-2018 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 266 5.9E-74 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IM40_04110 914581bf465a5e8a7d6e925ad60512f2 275 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 268 31.587 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IM40_11255 a27c6931aefb69d4b0472c3b1826d4b4 70 Pfam PF11753 Protein of unknwon function (DUF3310) 1 56 5.1E-16 T 14-10-2018 IPR021739 SaV-like IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 SUPERFAMILY SSF89919 12 122 7.98E-28 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 18 107 6.0E-18 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 14 120 23.049 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 Pfam PF02033 Ribosome-binding factor A 15 120 1.3E-27 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 86 107 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 14 122 2.7E-19 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IM40_05455 913e9c5fc2feea6dd0801f688e40fdcd 132 Gene3D G3DSA:3.30.300.20 12 128 1.7E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 7.0E-18 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 185 5.2E-45 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 SUPERFAMILY SSF50715 6 193 3.66E-56 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 Gene3D G3DSA:2.170.120.20 99 195 6.2E-26 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 Pfam PF01386 Ribosomal L25p family 7 94 2.9E-26 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 186 29.289 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 187 1.9E-27 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain IM40_05540 7a22894a47a2a2f357b6c55cc35d03ed 204 Gene3D G3DSA:2.40.240.10 5 97 2.5E-29 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IM40_07685 7eb59dfa7e8ff8dbf301a27f6ea840e3 277 SUPERFAMILY SSF56784 47 211 5.7E-10 T 14-10-2018 IPR036412 HAD-like superfamily IM40_07685 7eb59dfa7e8ff8dbf301a27f6ea840e3 277 ProDom PD317075 PRECURSOR RP296 SIGNAL 6 261 1.0E-9 T 14-10-2018 IPR020531 Uncharacterised protein family, RP296 IM40_07685 7eb59dfa7e8ff8dbf301a27f6ea840e3 277 Pfam PF11019 Protein of unknown function (DUF2608) 41 264 6.1E-24 T 14-10-2018 IPR022565 Protein of unknown function DUF2608 IM40_11430 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_11430 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_10310 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10310 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_10720 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10720 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_10495 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10495 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_10850 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10850 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_10995 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10995 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_11070 b862b37bc01ece6d9fd3c3bb1709f9c2 237 SUPERFAMILY SSF53098 70 190 1.95E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_11070 b862b37bc01ece6d9fd3c3bb1709f9c2 237 Pfam PF13610 DDE domain 73 211 6.1E-53 T 14-10-2018 IPR032874 DDE domain IM40_04285 43cf329aaca8075ba8066c823a47a801 653 Gene3D G3DSA:3.40.50.970 316 523 7.9E-80 T 14-10-2018 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 ProSitePatterns PS00802 Transketolase signature 2. 456 472 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 SUPERFAMILY SSF52518 1 303 4.01E-106 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold IM40_04285 43cf329aaca8075ba8066c823a47a801 653 Gene3D G3DSA:3.40.50.970 1 315 2.6E-109 T 14-10-2018 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 SUPERFAMILY SSF52518 331 514 7.2E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold IM40_04285 43cf329aaca8075ba8066c823a47a801 653 TIGRFAM TIGR00232 tktlase_bact: transketolase 2 646 1.2E-251 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 SMART SM00861 343 514 5.6E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IM40_04285 43cf329aaca8075ba8066c823a47a801 653 SUPERFAMILY SSF52922 522 651 4.45E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 Pfam PF02779 Transketolase, pyrimidine binding domain 344 513 6.0E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IM40_04285 43cf329aaca8075ba8066c823a47a801 653 Pfam PF02780 Transketolase, C-terminal domain 529 642 1.1E-10 T 14-10-2018 IPR033248 Transketolase, C-terminal domain IM40_04285 43cf329aaca8075ba8066c823a47a801 653 ProSitePatterns PS00801 Transketolase signature 1. 6 26 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 Gene3D G3DSA:3.40.50.920 528 653 1.6E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IM40_04285 43cf329aaca8075ba8066c823a47a801 653 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 2 322 1.9E-129 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IM40_04220 b89af8518bc4f16910563f5ca4d98892 482 Pfam PF02386 Cation transport protein 47 477 6.7E-57 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 IM40_04220 b89af8518bc4f16910563f5ca4d98892 482 PIRSF PIRSF006247 1 482 2.4E-154 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Pfam PF08264 Anticodon-binding domain of tRNA 692 844 3.4E-21 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 646 9.8E-193 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 SUPERFAMILY SSF47323 658 928 1.33E-55 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 927 19.364 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 846 3.6E-258 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Gene3D G3DSA:1.10.730.20 646 930 3.3E-78 T 14-10-2018 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 4.4E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 232 255 4.4E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 408 423 4.4E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 4.4E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 4.4E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Gene3D G3DSA:3.40.50.620 24 635 7.4E-228 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_00955 155da174b1d28e729061c8c898abc3bb 930 SUPERFAMILY SSF50677 206 410 3.98E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 SUPERFAMILY SSF52374 1 654 4.38E-131 T 14-10-2018 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Gene3D G3DSA:3.90.740.10 197 415 7.4E-228 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IM40_00955 155da174b1d28e729061c8c898abc3bb 930 Pfam PF06827 Zinc finger found in FPG and IleRS 896 925 6.0E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 SUPERFAMILY SSF51905 10 386 2.88E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 Gene3D G3DSA:3.30.9.50 82 271 5.1E-99 T 14-10-2018 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 Gene3D G3DSA:3.50.50.60 11 340 5.1E-99 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 10 392 5.3E-119 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 4.4E-21 T 14-10-2018 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.4E-21 T 14-10-2018 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 4.4E-21 T 14-10-2018 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 4.4E-21 T 14-10-2018 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 392 2.0E-124 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 IM40_07055 ab6048eab0229e245e036adc3a4d65ce 406 Pfam PF01494 FAD binding domain 8 338 6.5E-31 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 406 2.3E-68 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Gene3D G3DSA:1.10.730.10 10 787 0.0 T 14-10-2018 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Gene3D G3DSA:3.40.50.620 33 570 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 SUPERFAMILY SSF50677 226 418 1.57E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 SUPERFAMILY SSF52374 4 658 4.46E-143 T 14-10-2018 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 855 22.456 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Gene3D G3DSA:3.90.740.10 227 417 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Gene3D G3DSA:3.10.20.590 795 856 4.2E-19 T 14-10-2018 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 576 3.2E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 614 654 1.9E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 171 2.7E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 5.1E-47 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 855 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Pfam PF08264 Anticodon-binding domain of tRNA 698 812 2.6E-14 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 SUPERFAMILY SSF47323 663 855 2.94E-28 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_08970 62ce5b00600a4c4c4790eee3b54026d2 856 Gene3D G3DSA:3.10.330.110 571 624 0.0 T 14-10-2018 IM40_05195 2d40291eb73796edc983153339cb33fa 240 SUPERFAMILY SSF52540 1 235 1.14E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05195 2d40291eb73796edc983153339cb33fa 240 Gene3D G3DSA:3.40.50.300 1 239 2.6E-77 T 14-10-2018 IM40_05195 2d40291eb73796edc983153339cb33fa 240 PIRSF PIRSF039085 1 240 6.1E-109 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 IM40_05195 2d40291eb73796edc983153339cb33fa 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_05195 2d40291eb73796edc983153339cb33fa 240 Pfam PF00005 ABC transporter 17 165 1.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_05195 2d40291eb73796edc983153339cb33fa 240 SMART SM00382 26 213 3.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 SUPERFAMILY SSF52540 614 913 8.58E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Gene3D G3DSA:1.20.1580.10 92 494 1.9E-248 T 14-10-2018 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Gene3D G3DSA:3.40.50.300 617 936 6.0E-141 T 14-10-2018 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Gene3D G3DSA:3.40.50.300 8 597 1.9E-248 T 14-10-2018 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Gene3D G3DSA:1.10.8.280 287 403 1.9E-248 T 14-10-2018 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 SUPERFAMILY SSF52540 6 571 2.37E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 924 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Gene3D G3DSA:1.20.1580.10 692 830 6.0E-141 T 14-10-2018 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 940 22.775 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 IM40_05410 8497c7ecffa6155ae84c8c20c1f71b8e 940 Gene3D G3DSA:3.30.190.20 132 241 1.9E-248 T 14-10-2018 IM40_10780 a23d8156439af12b6bfffc251d3dfb92 93 SUPERFAMILY SSF143120 9 79 3.66E-14 T 14-10-2018 IPR036165 YefM-like superfamily IM40_10780 a23d8156439af12b6bfffc251d3dfb92 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 76 5.8E-16 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM IM40_10780 a23d8156439af12b6bfffc251d3dfb92 93 Gene3D G3DSA:3.40.1620.10 5 47 1.1E-7 T 14-10-2018 IM40_10780 a23d8156439af12b6bfffc251d3dfb92 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 61 5.8E-11 T 14-10-2018 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 Gene3D G3DSA:3.30.479.30 49 181 2.0E-43 T 14-10-2018 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 PRINTS PR00721 Stomatin signature 174 195 2.7E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 PRINTS PR00721 Stomatin signature 111 128 2.7E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 PRINTS PR00721 Stomatin signature 155 173 2.7E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 PRINTS PR00721 Stomatin signature 76 97 2.7E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 PRINTS PR00721 Stomatin signature 131 154 2.7E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 SMART SM00244 21 179 2.2E-59 T 14-10-2018 IPR001107 Band 7 domain IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 ProSitePatterns PS01270 Band 7 protein family signature. 135 163 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 Pfam PF01145 SPFH domain / Band 7 family 25 196 1.2E-35 T 14-10-2018 IPR001107 Band 7 domain IM40_04320 4c6c5c6982174744a7e1c674641b5a78 312 SUPERFAMILY SSF117892 52 186 3.92E-42 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily IM40_04650 46e0e00e49c23ccf83cf486c5229ac47 258 SUPERFAMILY SSF52540 10 237 1.36E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04650 46e0e00e49c23ccf83cf486c5229ac47 258 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_04650 46e0e00e49c23ccf83cf486c5229ac47 258 Pfam PF00005 ABC transporter 24 173 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_04650 46e0e00e49c23ccf83cf486c5229ac47 258 SMART SM00382 33 223 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04650 46e0e00e49c23ccf83cf486c5229ac47 258 Gene3D G3DSA:3.40.50.300 9 254 1.9E-65 T 14-10-2018 IM40_03100 294766f57800909d94f7ba19225dcce1 155 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 51 153 2.6E-38 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 IM40_03100 294766f57800909d94f7ba19225dcce1 155 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 154 27.02 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 IM40_03100 294766f57800909d94f7ba19225dcce1 155 Pfam PF00691 OmpA family 54 148 7.7E-22 T 14-10-2018 IPR006665 OmpA-like domain IM40_03100 294766f57800909d94f7ba19225dcce1 155 Gene3D G3DSA:3.30.1330.60 31 153 1.7E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily IM40_03100 294766f57800909d94f7ba19225dcce1 155 SUPERFAMILY SSF103088 43 149 6.15E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily IM40_03100 294766f57800909d94f7ba19225dcce1 155 PRINTS PR01021 OMPA domain signature 84 99 1.3E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IM40_03100 294766f57800909d94f7ba19225dcce1 155 PRINTS PR01021 OMPA domain signature 99 115 1.3E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IM40_03100 294766f57800909d94f7ba19225dcce1 155 PRINTS PR01021 OMPA domain signature 54 76 1.3E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IM40_10435 7851628d406616368d5ac7baab79a736 641 Pfam PF02867 Ribonucleotide reductase, barrel domain 132 451 2.9E-72 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 Pfam PF02867 Ribonucleotide reductase, barrel domain 459 605 2.3E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 PRINTS PR01183 Ribonucleotide reductase large chain signature 395 417 2.4E-18 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 PRINTS PR01183 Ribonucleotide reductase large chain signature 205 224 2.4E-18 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 PRINTS PR01183 Ribonucleotide reductase large chain signature 316 327 2.4E-18 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 PRINTS PR01183 Ribonucleotide reductase large chain signature 458 485 2.4E-18 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 SUPERFAMILY SSF48168 23 127 1.15E-17 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10435 7851628d406616368d5ac7baab79a736 641 Gene3D G3DSA:3.20.70.20 21 616 2.0E-171 T 14-10-2018 IM40_10435 7851628d406616368d5ac7baab79a736 641 SUPERFAMILY SSF51998 130 610 3.66E-134 T 14-10-2018 IM40_10435 7851628d406616368d5ac7baab79a736 641 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 64 128 9.9E-14 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_06235 9813878957adf163fa12a9738f70699e 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.0E-65 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06235 9813878957adf163fa12a9738f70699e 142 Gene3D G3DSA:1.10.10.2720 73 142 7.4E-29 T 14-10-2018 IM40_06235 9813878957adf163fa12a9738f70699e 142 Gene3D G3DSA:3.30.1550.10 2 72 6.6E-36 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IM40_06235 9813878957adf163fa12a9738f70699e 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.887 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 IM40_06235 9813878957adf163fa12a9738f70699e 142 SUPERFAMILY SSF46906 68 140 2.22E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily IM40_06235 9813878957adf163fa12a9738f70699e 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-14 T 14-10-2018 IM40_06235 9813878957adf163fa12a9738f70699e 142 SMART SM00649 9 141 1.0E-81 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 IM40_06235 9813878957adf163fa12a9738f70699e 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.8E-24 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 IM40_06235 9813878957adf163fa12a9738f70699e 142 SUPERFAMILY SSF54747 3 73 7.59E-31 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IM40_06235 9813878957adf163fa12a9738f70699e 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.8E-31 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal IM40_05280 b53067886236df63fd9b89168884b974 555 Pfam PF00753 Metallo-beta-lactamase superfamily 34 174 1.7E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase IM40_05280 b53067886236df63fd9b89168884b974 555 Gene3D G3DSA:3.40.50.10710 209 359 3.1E-153 T 14-10-2018 IM40_05280 b53067886236df63fd9b89168884b974 555 SMART SM00849 24 216 1.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase IM40_05280 b53067886236df63fd9b89168884b974 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 417 2.9E-11 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain IM40_05280 b53067886236df63fd9b89168884b974 555 Gene3D G3DSA:3.60.15.10 15 439 3.1E-153 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_05280 b53067886236df63fd9b89168884b974 555 Gene3D G3DSA:3.10.20.580 452 554 2.1E-5 T 14-10-2018 IM40_05280 b53067886236df63fd9b89168884b974 555 SUPERFAMILY SSF56281 14 425 4.06E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_04955 6b62b67f2182182aadc3bb641f9c846d 66 Pfam PF04325 Protein of unknown function (DUF465) 12 57 5.5E-11 T 14-10-2018 IPR007420 Protein of unknown function DUF465 IM40_04955 6b62b67f2182182aadc3bb641f9c846d 66 Gene3D G3DSA:1.20.58.660 2 61 4.3E-8 T 14-10-2018 IM40_06200 290fc513c51ea41e5e5aca736687ab34 186 Gene3D G3DSA:3.40.50.360 1 182 4.5E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily IM40_06200 290fc513c51ea41e5e5aca736687ab34 186 SUPERFAMILY SSF52218 1 159 6.21E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily IM40_06200 290fc513c51ea41e5e5aca736687ab34 186 Pfam PF03358 NADPH-dependent FMN reductase 1 137 2.4E-30 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 Pfam PF00588 SpoU rRNA Methylase family 101 242 1.3E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 15 247 1.0E-57 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 Gene3D G3DSA:3.30.1330.30 5 83 4.6E-6 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 Gene3D G3DSA:3.40.1280.10 84 249 1.5E-47 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 SUPERFAMILY SSF55315 9 83 1.74E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 15 86 5.0E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 SMART SM00967 15 88 6.6E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 IM40_06540 8df0e7df80d99009651f95c27a1e564d 251 SUPERFAMILY SSF75217 77 247 1.64E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 331 407 8.9E-34 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 SUPERFAMILY SSF47781 414 605 1.04E-45 T 14-10-2018 IPR010994 RuvA domain 2-like IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:1.10.150.20 522 610 4.3E-18 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 620 692 3.5E-11 T 14-10-2018 IPR001357 BRCT domain IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 SMART SM00292 618 695 1.8E-11 T 14-10-2018 IPR001357 BRCT domain IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 25 688 9.0E-231 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:3.30.470.90 86 327 3.9E-93 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 SUPERFAMILY SSF56091 14 326 3.29E-112 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 SMART SM00532 17 458 1.1E-238 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Pfam PF12826 Helix-hairpin-helix motif 526 598 5.9E-12 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 418 444 3.7E-6 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:1.10.287.610 13 85 3.6E-20 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:3.40.50.10190 618 695 3.4E-25 T 14-10-2018 IPR036420 BRCT domain superfamily IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 341 356 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:2.20.70.80 403 440 8.4E-13 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 PIRSF PIRSF001604 10 696 7.5E-229 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:1.10.150.20 442 521 1.4E-24 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 130 159 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 SUPERFAMILY SSF52113 617 693 1.12E-17 T 14-10-2018 IPR036420 BRCT domain superfamily IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 SUPERFAMILY SSF50249 327 410 1.32E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Gene3D G3DSA:2.40.50.140 328 400 6.2E-33 T 14-10-2018 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Hamap MF_01588 DNA ligase [ligA]. 16 692 48.209 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 IM40_03670 7b3f02118e7420a5b5dc719d62ae7570 696 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 17 328 4.2E-116 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 Hamap MF_01899 Ribonuclease D [rnd]. 1 366 39.97 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 SUPERFAMILY SSF47819 194 292 7.2E-19 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 SMART SM00474 1 170 4.6E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 Gene3D G3DSA:3.30.420.10 1 192 3.5E-63 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 Pfam PF00570 HRDC domain 212 278 1.1E-15 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 SUPERFAMILY SSF53098 3 203 7.01E-66 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 TIGRFAM TIGR01388 rnd: ribonuclease D 3 366 2.0E-118 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 Gene3D G3DSA:1.10.150.80 194 292 1.2E-16 T 14-10-2018 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 SUPERFAMILY SSF47819 303 369 8.11E-10 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 SMART SM00341 208 289 9.8E-7 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 IM40_04605 d53803ab7b408d11693cca5662a9baf8 388 Pfam PF01612 3'-5' exonuclease 2 169 1.2E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 Pfam PF02910 Fumarate reductase flavoprotein C-term 464 597 2.0E-42 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 Gene3D G3DSA:3.50.50.60 13 420 6.2E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 Gene3D G3DSA:1.20.58.100 438 548 7.0E-36 T 14-10-2018 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 Gene3D G3DSA:4.10.80.40 549 597 1.9E-10 T 14-10-2018 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 PIRSF PIRSF000171 2 587 2.7E-42 T 14-10-2018 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 SUPERFAMILY SSF46977 455 597 4.19E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 Pfam PF00890 FAD binding domain 13 409 6.9E-119 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 SUPERFAMILY SSF51905 5 435 4.63E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 Gene3D G3DSA:3.90.700.10 251 354 6.2E-162 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 SUPERFAMILY SSF56425 241 359 3.59E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 591 3.5E-281 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09195 2407be213bf9b6fca0bc204c9369df47 597 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 597 3.4E-237 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_03710 3501b094e1bdbbb5a2f5cdd2b889c365 162 Gene3D G3DSA:3.90.1720.10 17 156 1.3E-8 T 14-10-2018 IM40_03710 3501b094e1bdbbb5a2f5cdd2b889c365 162 Pfam PF05257 CHAP domain 46 140 7.0E-9 T 14-10-2018 IPR007921 CHAP domain IM40_03710 3501b094e1bdbbb5a2f5cdd2b889c365 162 SUPERFAMILY SSF54001 43 143 1.18E-6 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 123 4.4E-11 T 14-10-2018 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 SUPERFAMILY SSF54211 216 328 2.66E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 601 27.331 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Gene3D G3DSA:3.30.565.10 1 209 1.2E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 91 97 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 SMART SM01340 211 329 7.9E-51 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Gene3D G3DSA:3.30.230.10 216 328 3.4E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 SMART SM00853 418 561 3.6E-51 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Gene3D G3DSA:2.30.42.20 420 598 1.3E-58 T 14-10-2018 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 328 2.7E-35 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 SUPERFAMILY SSF55874 2 198 2.23E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 SUPERFAMILY SSF118116 413 603 2.09E-58 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 309 3.7E-90 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Pfam PF08676 MutL C terminal dimerisation domain 414 561 2.8E-47 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 IM40_00925 d7d4c59526fa4e294365420a6ae7a10d 604 Gene3D G3DSA:3.30.1370.100 461 556 1.3E-58 T 14-10-2018 IM40_01335 fbcf521718e95519b48f381d4b7eefa7 306 Gene3D G3DSA:1.10.10.10 1 94 2.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01335 fbcf521718e95519b48f381d4b7eefa7 306 SUPERFAMILY SSF53850 92 295 4.76E-23 T 14-10-2018 IM40_01335 fbcf521718e95519b48f381d4b7eefa7 306 Pfam PF03466 LysR substrate binding domain 91 274 1.5E-17 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_01335 fbcf521718e95519b48f381d4b7eefa7 306 SUPERFAMILY SSF46785 1 110 1.36E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_01335 fbcf521718e95519b48f381d4b7eefa7 306 Gene3D G3DSA:3.40.190.290 95 289 3.8E-26 T 14-10-2018 IM40_01335 fbcf521718e95519b48f381d4b7eefa7 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_00270 196b0a5a30fb2ca41da98944eef34305 254 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site IM40_00270 196b0a5a30fb2ca41da98944eef34305 254 SUPERFAMILY SSF54523 19 75 5.49E-8 T 14-10-2018 IM40_00270 196b0a5a30fb2ca41da98944eef34305 254 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 36 3.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site IM40_00270 196b0a5a30fb2ca41da98944eef34305 254 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 1.2E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site IM40_00270 196b0a5a30fb2ca41da98944eef34305 254 Gene3D G3DSA:3.30.700.10 18 76 8.6E-7 T 14-10-2018 IM40_08525 8437f35413e36ed3d4826652bade63f1 268 Gene3D G3DSA:1.25.40.10 62 183 5.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08525 8437f35413e36ed3d4826652bade63f1 268 SUPERFAMILY SSF81901 82 143 2.75E-9 T 14-10-2018 IM40_03220 af72eaf7b9eb4c18c30461b6f12755e3 300 SUPERFAMILY SSF56281 20 118 1.2E-9 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_03220 af72eaf7b9eb4c18c30461b6f12755e3 300 Gene3D G3DSA:3.60.15.10 3 124 1.8E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 SMART SM00434 11 463 8.4E-211 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Gene3D G3DSA:3.90.199.10 32 480 5.9E-178 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 740 8.4E-253 T 14-10-2018 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 SUPERFAMILY SSF101904 508 739 5.23E-44 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 SUPERFAMILY SSF56719 31 479 7.72E-153 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 4 740 30.355 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Gene3D G3DSA:2.120.10.90 505 695 2.6E-16 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 467 1.4E-138 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 551 598 0.012 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 652 687 2.7E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Gene3D G3DSA:3.30.1360.40 237 333 5.9E-178 T 14-10-2018 IM40_08720 a1e4b53dc0178874908752456e6a17b9 740 Gene3D G3DSA:1.10.268.10 371 456 5.9E-178 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 Gene3D G3DSA:1.10.1050.10 6 204 4.5E-68 T 14-10-2018 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 SMART SM00363 93 157 2.4E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 Gene3D G3DSA:3.10.290.10 92 187 4.5E-68 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 SUPERFAMILY SSF55174 6 204 7.98E-59 T 14-10-2018 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 6.4E-73 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 31.913 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 SMART SM01390 3 92 1.9E-36 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 92 4.6E-25 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 IM40_06670 c045dbd82f50c9141d8d0dd8ce8a8a29 204 Pfam PF01479 S4 domain 93 140 6.5E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 SUPERFAMILY SSF51569 1 288 4.71E-94 T 14-10-2018 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 Gene3D G3DSA:3.20.20.70 1 291 2.8E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 4.1E-78 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 53.759 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 3.6E-21 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 3.6E-21 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 3.6E-21 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 3.6E-21 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 SMART SM01130 1 288 1.2E-121 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 PIRSF PIRSF001365 1 296 2.8E-83 T 14-10-2018 IPR002220 DapA-like GO:0016829 IM40_06140 90e245d92e221aa3db9fad2857af9136 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 285 3.9E-92 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_00335 fcc8b54b30f3e5265bc367d89b8194aa 437 Gene3D G3DSA:1.20.1740.10 4 437 1.6E-95 T 14-10-2018 IM40_00335 fcc8b54b30f3e5265bc367d89b8194aa 437 PIRSF PIRSF006060 2 436 3.0E-70 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IM40_00335 fcc8b54b30f3e5265bc367d89b8194aa 437 Pfam PF13520 Amino acid permease 9 405 5.4E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 SUPERFAMILY SSF89095 308 419 1.2E-29 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 14 492 37.009 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 SUPERFAMILY SSF55931 16 307 1.24E-115 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 Gene3D G3DSA:1.10.10.410 431 493 5.3E-24 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 156 170 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 Pfam PF02637 GatB domain 350 491 1.7E-46 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 Gene3D G3DSA:1.10.150.380 311 429 2.7E-35 T 14-10-2018 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 15 491 1.9E-168 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 SMART SM00845 339 491 2.2E-66 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 IM40_00695 5147f45fb13920679a93d5b4cb2ad469 493 Pfam PF02934 GatB/GatE catalytic domain 17 300 4.1E-111 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 IM40_01180 b1a0db2d8ceb7b037a45015871989b91 208 Gene3D G3DSA:3.40.50.150 7 208 1.4E-69 T 14-10-2018 IM40_01180 b1a0db2d8ceb7b037a45015871989b91 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 IM40_01180 b1a0db2d8ceb7b037a45015871989b91 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 22 208 7.1E-56 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 IM40_01180 b1a0db2d8ceb7b037a45015871989b91 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 208 6.7E-55 T 14-10-2018 IM40_01180 b1a0db2d8ceb7b037a45015871989b91 208 SUPERFAMILY SSF53335 21 208 4.42E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_01180 b1a0db2d8ceb7b037a45015871989b91 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 5 208 32.62 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 SUPERFAMILY SSF56176 341 419 3.27E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 Gene3D G3DSA:3.30.465.10 341 418 4.4E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 Pfam PF03471 Transporter associated domain 344 418 7.4E-15 T 14-10-2018 IPR005170 Transporter-associated domain IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 Pfam PF00571 CBS domain 278 327 1.5E-7 T 14-10-2018 IPR000644 CBS domain IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 Pfam PF00571 CBS domain 206 262 8.5E-5 T 14-10-2018 IPR000644 CBS domain IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 SUPERFAMILY SSF54631 201 343 4.15E-30 T 14-10-2018 IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 Gene3D G3DSA:3.10.580.10 187 340 1.0E-49 T 14-10-2018 IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 Pfam PF01595 Domain of unknown function DUF21 11 181 2.6E-35 T 14-10-2018 IPR002550 CNNM, transmembrane domain IM40_07585 75a32565c40a74609b9de8cf6d4b6b58 422 SMART SM01091 342 420 1.7E-18 T 14-10-2018 IPR005170 Transporter-associated domain IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 Hamap MF_01603 Bifunctional protein HldE [hldE]. 10 488 40.409 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 270 283 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 Gene3D G3DSA:3.40.50.620 334 491 1.9E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 356 419 3.4E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 SUPERFAMILY SSF52374 355 482 2.82E-23 T 14-10-2018 IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 Pfam PF00294 pfkB family carbohydrate kinase 17 314 1.1E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 13 324 4.0E-117 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 346 486 1.7E-61 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 SUPERFAMILY SSF53613 19 326 1.17E-57 T 14-10-2018 IPR029056 Ribokinase-like IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 Gene3D G3DSA:3.40.1190.20 9 321 1.5E-103 T 14-10-2018 IPR029056 Ribokinase-like IM40_08755 fbeb0c73354a0dec311cee03d87420cf 496 Pfam PF01467 Cytidylyltransferase-like 359 467 1.8E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IM40_09610 c2d6ee7785d2ef57fcb63438df1e0fa3 331 Pfam PF01734 Patatin-like phospholipase 4 199 2.5E-24 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_09610 c2d6ee7785d2ef57fcb63438df1e0fa3 331 SUPERFAMILY SSF52151 3 317 8.63E-56 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_09610 c2d6ee7785d2ef57fcb63438df1e0fa3 331 Gene3D G3DSA:3.40.1090.10 1 331 2.2E-94 T 14-10-2018 IM40_08670 23990a9bdc8b32c863c86181740f009a 329 SUPERFAMILY SSF52540 43 154 3.19E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08670 23990a9bdc8b32c863c86181740f009a 329 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 324 33.704 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 IM40_08670 23990a9bdc8b32c863c86181740f009a 329 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 16 317 2.0E-86 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 IM40_08670 23990a9bdc8b32c863c86181740f009a 329 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 14 320 2.9E-69 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Gene3D G3DSA:3.90.1150.50 1006 1151 2.2E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SUPERFAMILY SSF143517 1002 1147 2.22E-42 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Gene3D G3DSA:3.40.50.11180 22 338 2.2E-88 T 14-10-2018 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SUPERFAMILY SSF52540 528 787 8.18E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Gene3D G3DSA:3.40.50.300 483 990 4.2E-222 T 14-10-2018 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SUPERFAMILY SSF141259 475 551 7.19E-20 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Pfam PF00270 DEAD/DEAH box helicase 608 769 2.9E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Pfam PF00271 Helicase conserved C-terminal domain 810 912 4.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SUPERFAMILY SSF52540 785 991 3.41E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SMART SM00982 1010 1110 1.6E-42 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SMART SM00487 603 793 8.8E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Pfam PF02559 CarD-like/TRCF domain 484 577 9.6E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 147 1084 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SUPERFAMILY SSF52540 357 474 1.3E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Pfam PF03461 TRCF domain 1012 1103 1.0E-26 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Gene3D G3DSA:3.30.2060.10 129 214 2.2E-88 T 14-10-2018 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SMART SM01058 483 579 6.6E-42 T 14-10-2018 IPR003711 CarD-like/TRCF domain IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1111 27.271 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SMART SM00490 829 913 1.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Gene3D G3DSA:3.40.50.300 545 784 4.2E-222 T 14-10-2018 IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 SUPERFAMILY SSF52540 5 351 6.21E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01885 763a4307c3c26a973c6931ad3d2239d2 1153 Gene3D G3DSA:2.30.30.840 487 544 4.2E-222 T 14-10-2018 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SMART SM00028 135 168 0.18 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SMART SM00028 101 134 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SMART SM00028 169 202 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SMART SM00028 67 100 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SMART SM00028 203 236 93.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SMART SM00028 33 66 46.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 SUPERFAMILY SSF48452 35 231 4.93E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 Gene3D G3DSA:1.25.40.10 21 257 1.1E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_03470 deb4b38fb2de099d7353c7b25cdd0d47 341 Pfam PF13432 Tetratricopeptide repeat 46 92 3.0E-6 T 14-10-2018 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 249 275 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 Gene3D G3DSA:1.20.120.1810 12 111 3.8E-28 T 14-10-2018 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 SUPERFAMILY SSF88659 189 280 1.05E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 277 3.2E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 SUPERFAMILY SSF88946 3 112 7.85E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 PRINTS PR00046 Major sigma-70 factor signature 68 81 2.4E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 PRINTS PR00046 Major sigma-70 factor signature 264 275 2.4E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 PRINTS PR00046 Major sigma-70 factor signature 92 100 2.4E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 PRINTS PR00046 Major sigma-70 factor signature 249 264 2.4E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 PRINTS PR00046 Major sigma-70 factor signature 230 242 2.4E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 Pfam PF04545 Sigma-70, region 4 226 277 9.7E-12 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 Gene3D G3DSA:1.20.140.160 148 281 4.0E-13 T 14-10-2018 IM40_03630 414b09078e7566fb454cf0c2e4810fb3 290 Pfam PF04542 Sigma-70 region 2 44 112 4.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 IM40_02980 3f6d62d6052719ef944162f8493bae40 79 Gene3D G3DSA:3.40.1620.10 1 39 8.7E-10 T 14-10-2018 IM40_02980 3f6d62d6052719ef944162f8493bae40 79 SUPERFAMILY SSF143120 1 44 3.66E-10 T 14-10-2018 IPR036165 YefM-like superfamily IM40_02980 3f6d62d6052719ef944162f8493bae40 79 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 41 1.8E-8 T 14-10-2018 IM40_02980 3f6d62d6052719ef944162f8493bae40 79 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 43 3.7E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 Gene3D G3DSA:3.30.300.130 107 181 1.7E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 Pfam PF01106 NifU-like domain 113 178 5.9E-29 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 86 8.0E-30 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 SUPERFAMILY SSF110836 2 89 1.09E-29 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 SMART SM00932 3 89 5.6E-43 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 181 5.0E-24 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 PIRSF PIRSF036773 1 182 4.2E-74 T 14-10-2018 IPR035433 NFU1-like IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 Gene3D G3DSA:3.30.1370.70 1 96 2.0E-31 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily IM40_06875 0e460c181301fbca9c955b573e5e3c1c 182 SUPERFAMILY SSF117916 104 181 3.49E-28 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily IM40_00245 9ffacaaa860aaca85ecc880ac26ae0df 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.943 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00245 9ffacaaa860aaca85ecc880ac26ae0df 44 Pfam PF00468 Ribosomal protein L34 1 44 3.0E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00245 9ffacaaa860aaca85ecc880ac26ae0df 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 1.0E-11 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00245 9ffacaaa860aaca85ecc880ac26ae0df 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.2E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00565 613e01c3af4b434b5223cdf145de8cc8 390 Pfam PF04055 Radical SAM superfamily 9 177 1.8E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IM40_00565 613e01c3af4b434b5223cdf145de8cc8 390 Pfam PF06969 HemN C-terminal domain 306 372 5.0E-8 T 14-10-2018 IPR010723 HemN, C-terminal IM40_00565 613e01c3af4b434b5223cdf145de8cc8 390 SMART SM00729 4 223 3.0E-47 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IM40_00565 613e01c3af4b434b5223cdf145de8cc8 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 360 7.7E-93 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 IM40_00565 613e01c3af4b434b5223cdf145de8cc8 390 Gene3D G3DSA:3.80.30.20 1 305 2.3E-91 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IM40_00565 613e01c3af4b434b5223cdf145de8cc8 390 SUPERFAMILY SSF102114 4 383 5.76E-100 T 14-10-2018 IM40_00975 13235e15800d6dc793368d51d5d71781 153 Gene3D G3DSA:3.90.1180.10 1 143 2.5E-55 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_00975 13235e15800d6dc793368d51d5d71781 153 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 2.3E-56 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00975 13235e15800d6dc793368d51d5d71781 153 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 139 27.805 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 IM40_00975 13235e15800d6dc793368d51d5d71781 153 SUPERFAMILY SSF52161 1 139 2.49E-54 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_00975 13235e15800d6dc793368d51d5d71781 153 PIRSF PIRSF002181 1 153 4.8E-49 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 IM40_00975 13235e15800d6dc793368d51d5d71781 153 Pfam PF00572 Ribosomal protein L13 14 137 2.9E-50 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 IM40_05290 e78e85650f8514c696d20669d2a801ba 248 Pfam PF02237 Biotin protein ligase C terminal domain 200 245 1.9E-8 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IM40_05290 e78e85650f8514c696d20669d2a801ba 248 Gene3D G3DSA:3.30.930.10 2 194 1.1E-41 T 14-10-2018 IM40_05290 e78e85650f8514c696d20669d2a801ba 248 Pfam PF03099 Biotin/lipoate A/B protein ligase family 24 123 4.2E-11 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 IM40_05290 e78e85650f8514c696d20669d2a801ba 248 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 8 244 1.3E-38 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IM40_05290 e78e85650f8514c696d20669d2a801ba 248 Gene3D G3DSA:2.30.30.100 196 246 2.1E-8 T 14-10-2018 IM40_05290 e78e85650f8514c696d20669d2a801ba 248 SUPERFAMILY SSF55681 5 191 1.82E-42 T 14-10-2018 IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 Gene3D G3DSA:3.30.450.40 108 342 7.0E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 Pfam PF01628 HrcA protein C terminal domain 108 329 9.2E-52 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 SUPERFAMILY SSF46785 5 87 2.82E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 PIRSF PIRSF005485 2 344 5.1E-101 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 7 72 4.0E-5 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 Gene3D G3DSA:1.10.10.10 1 87 5.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 Gene3D G3DSA:3.30.390.60 131 232 7.0E-34 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 4 336 26.817 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 8 341 6.8E-88 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 IM40_07195 a54dd1d094f7882843b92e4c12427cf5 344 SUPERFAMILY SSF55781 75 344 2.89E-52 T 14-10-2018 IM40_05330 6c94a5e66450664cbefcb35164f36925 292 Pfam PF04085 rod shape-determining protein MreC 138 272 1.2E-27 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 IM40_05330 6c94a5e66450664cbefcb35164f36925 292 PIRSF PIRSF038471 16 285 9.5E-53 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 IM40_05330 6c94a5e66450664cbefcb35164f36925 292 Gene3D G3DSA:2.40.10.350 190 260 7.5E-27 T 14-10-2018 IM40_05330 6c94a5e66450664cbefcb35164f36925 292 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 25 273 1.4E-37 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 IM40_05330 6c94a5e66450664cbefcb35164f36925 292 Gene3D G3DSA:2.40.10.340 131 271 7.5E-27 T 14-10-2018 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 448 25.701 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 Gene3D G3DSA:3.40.50.620 1 320 2.4E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 310 1.4E-75 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 Gene3D G3DSA:1.10.10.350 360 448 4.9E-20 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 445 3.8E-110 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 7.4E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 207 7.4E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 183 193 7.4E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 7.4E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 7.4E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 SUPERFAMILY SSF52374 5 302 2.95E-88 T 14-10-2018 IM40_04030 8d8cff530c4c8696b04b53899c3eeb1d 449 SUPERFAMILY SSF48163 285 445 4.58E-27 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 Gene3D G3DSA:3.40.50.300 5 185 7.2E-35 T 14-10-2018 IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 462 4.9E-57 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 14 1098 2.2E-293 T 14-10-2018 IPR014151 DNA helicase, AddA type IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 Gene3D G3DSA:3.40.50.300 347 499 2.2E-31 T 14-10-2018 IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 Gene3D G3DSA:3.40.50.300 708 876 2.1E-22 T 14-10-2018 IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 SUPERFAMILY SSF52540 16 867 3.44E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 Gene3D G3DSA:3.40.50.300 547 647 2.0E-11 T 14-10-2018 IM40_06945 5848f00b3c0c2c7e9f8bb9fb04277de5 1100 Pfam PF13361 UvrD-like helicase C-terminal domain 478 852 3.6E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IM40_04775 82cd6293929cb4da21d3927236a32f51 218 Pfam PF02390 Putative methyltransferase 48 208 1.4E-42 T 14-10-2018 IM40_04775 82cd6293929cb4da21d3927236a32f51 218 Gene3D G3DSA:3.40.50.150 18 218 8.5E-52 T 14-10-2018 IM40_04775 82cd6293929cb4da21d3927236a32f51 218 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 39 182 2.9E-39 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 IM40_04775 82cd6293929cb4da21d3927236a32f51 218 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 11 218 26.369 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 IM40_04775 82cd6293929cb4da21d3927236a32f51 218 SUPERFAMILY SSF53335 35 215 9.52E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 21 243 4.2E-43 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 ProSitePatterns PS00760 Signal peptidases I lysine active site. 108 120 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 Gene3D G3DSA:2.10.109.10 36 242 3.2E-54 T 14-10-2018 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 Pfam PF00717 Peptidase S24-like 43 130 2.7E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 Gene3D G3DSA:2.170.230.10 117 199 3.2E-54 T 14-10-2018 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 ProSitePatterns PS00761 Signal peptidases I signature 3. 205 218 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 106 118 3.4E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 36 52 3.4E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 200 219 3.4E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_01740 3bed6a89a40e3ee199e64534578cd99d 267 SUPERFAMILY SSF51306 36 265 1.2E-55 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_09815 ce16941274e28730c001a4889df2cefa 659 Pfam PF00089 Trypsin 150 343 7.5E-7 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 IM40_09815 ce16941274e28730c001a4889df2cefa 659 Gene3D G3DSA:2.40.10.10 127 235 7.2E-40 T 14-10-2018 IM40_09815 ce16941274e28730c001a4889df2cefa 659 SUPERFAMILY SSF50494 146 331 1.03E-18 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_09815 ce16941274e28730c001a4889df2cefa 659 Gene3D G3DSA:2.40.10.10 120 327 7.2E-40 T 14-10-2018 IM40_07695 abb489fef7e5f56ef0c0f3db8d5e8922 374 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 138 363 1.8E-54 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 IM40_07695 abb489fef7e5f56ef0c0f3db8d5e8922 374 SUPERFAMILY SSF50156 113 209 9.46E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_07695 abb489fef7e5f56ef0c0f3db8d5e8922 374 Gene3D G3DSA:2.30.42.10 143 227 4.0E-18 T 14-10-2018 IM40_07695 abb489fef7e5f56ef0c0f3db8d5e8922 374 SMART SM00228 130 201 2.5E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_07695 abb489fef7e5f56ef0c0f3db8d5e8922 374 Pfam PF02163 Peptidase family M50 14 351 1.9E-73 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 IM40_01270 750442414869a51b4a90f0db7a991042 511 SMART SM00062 29 267 2.5E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IM40_01270 750442414869a51b4a90f0db7a991042 511 SUPERFAMILY SSF53850 36 264 1.63E-33 T 14-10-2018 IM40_01270 750442414869a51b4a90f0db7a991042 511 Gene3D G3DSA:3.40.190.10 116 223 3.2E-28 T 14-10-2018 IM40_01270 750442414869a51b4a90f0db7a991042 511 Pfam PF03458 UPF0126 domain 386 457 2.5E-9 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 IM40_01270 750442414869a51b4a90f0db7a991042 511 Pfam PF03458 UPF0126 domain 280 351 4.8E-15 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 IM40_01270 750442414869a51b4a90f0db7a991042 511 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 264 6.8E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IM40_01270 750442414869a51b4a90f0db7a991042 511 Gene3D G3DSA:3.40.190.10 37 260 3.2E-28 T 14-10-2018 IM40_01125 6ff89efbd2ce9809c99f1fe51174ed87 608 PIRSF PIRSF002741 3 605 1.3E-104 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 IM40_01125 6ff89efbd2ce9809c99f1fe51174ed87 608 Gene3D G3DSA:3.40.190.10 31 600 4.3E-236 T 14-10-2018 IM40_01125 6ff89efbd2ce9809c99f1fe51174ed87 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 515 3.7E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain IM40_01125 6ff89efbd2ce9809c99f1fe51174ed87 608 SUPERFAMILY SSF53850 55 601 9.77E-118 T 14-10-2018 IM40_01125 6ff89efbd2ce9809c99f1fe51174ed87 608 Gene3D G3DSA:3.10.105.10 321 580 4.3E-236 T 14-10-2018 IM40_07525 12299e6c93196402b94368124f062fb4 447 SUPERFAMILY SSF52151 73 410 6.28E-43 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_07525 12299e6c93196402b94368124f062fb4 447 Gene3D G3DSA:3.40.1090.10 62 421 7.5E-60 T 14-10-2018 IM40_07525 12299e6c93196402b94368124f062fb4 447 Pfam PF01734 Patatin-like phospholipase 78 283 7.7E-27 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_08635 141154f0e46045fa8ed2d55a60c3a0bc 379 SUPERFAMILY SSF53756 25 377 1.03E-60 T 14-10-2018 IM40_08635 141154f0e46045fa8ed2d55a60c3a0bc 379 Pfam PF00534 Glycosyl transferases group 1 199 358 1.9E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 IM40_08635 141154f0e46045fa8ed2d55a60c3a0bc 379 Gene3D G3DSA:3.40.50.2000 25 374 7.0E-55 T 14-10-2018 IM40_08635 141154f0e46045fa8ed2d55a60c3a0bc 379 Pfam PF13477 Glycosyl transferase 4-like 7 155 4.3E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IM40_08635 141154f0e46045fa8ed2d55a60c3a0bc 379 Gene3D G3DSA:3.40.50.2000 184 364 7.0E-55 T 14-10-2018 IM40_06470 5284a51b037c0028022f5d048b1e14f2 354 Gene3D G3DSA:3.40.1090.10 134 285 2.3E-14 T 14-10-2018 IM40_06470 5284a51b037c0028022f5d048b1e14f2 354 Gene3D G3DSA:3.40.1090.10 5 133 3.5E-15 T 14-10-2018 IM40_06470 5284a51b037c0028022f5d048b1e14f2 354 SUPERFAMILY SSF52151 20 342 3.14E-49 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_06470 5284a51b037c0028022f5d048b1e14f2 354 Pfam PF01734 Patatin-like phospholipase 26 223 4.1E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_00065 a56f5eb94060266650cbf9eca68ee223 685 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 20 635 1.1E-190 T 14-10-2018 IPR004814 Oligopeptide transporter OPT IM40_00065 a56f5eb94060266650cbf9eca68ee223 685 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 12 637 4.3E-92 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 IM40_00065 a56f5eb94060266650cbf9eca68ee223 685 Pfam PF03169 OPT oligopeptide transporter protein 20 636 8.3E-101 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 IM40_05000 32194d5e3680a734685d83050cfc1099 600 Gene3D G3DSA:3.30.70.870 289 370 1.7E-34 T 14-10-2018 IM40_05000 32194d5e3680a734685d83050cfc1099 600 SUPERFAMILY SSF50447 169 291 3.33E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_05000 32194d5e3680a734685d83050cfc1099 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 5.8E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 SUPERFAMILY SSF54980 296 373 8.27E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like IM40_05000 32194d5e3680a734685d83050cfc1099 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 595 1.6E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal IM40_05000 32194d5e3680a734685d83050cfc1099 600 Gene3D G3DSA:3.30.70.3380 371 481 2.2E-42 T 14-10-2018 IM40_05000 32194d5e3680a734685d83050cfc1099 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 307.888 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 SUPERFAMILY SSF52540 5 208 1.6E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05000 32194d5e3680a734685d83050cfc1099 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 178 6.0E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 Gene3D G3DSA:3.40.50.300 3 188 9.2E-72 T 14-10-2018 IM40_05000 32194d5e3680a734685d83050cfc1099 600 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 6.5E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 Gene3D G3DSA:3.30.70.2570 482 556 1.7E-35 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily IM40_05000 32194d5e3680a734685d83050cfc1099 600 Gene3D G3DSA:2.40.30.10 189 288 1.2E-33 T 14-10-2018 IM40_05000 32194d5e3680a734685d83050cfc1099 600 SUPERFAMILY SSF54980 402 496 2.3E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like IM40_05000 32194d5e3680a734685d83050cfc1099 600 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 1.7E-295 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 Pfam PF00679 Elongation factor G C-terminus 402 487 1.5E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like IM40_05000 32194d5e3680a734685d83050cfc1099 600 SMART SM00838 401 488 0.0044 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like IM40_05000 32194d5e3680a734685d83050cfc1099 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05000 32194d5e3680a734685d83050cfc1099 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 SUPERFAMILY SSF52540 63 396 6.24E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Gene3D G3DSA:3.40.50.300 58 312 3.2E-107 T 14-10-2018 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Pfam PF06689 ClpX C4-type zinc finger 12 49 1.5E-18 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 307 3.0E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Gene3D G3DSA:1.10.8.60 313 420 1.3E-40 T 14-10-2018 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 SUPERFAMILY SSF57716 12 47 1.3E-11 T 14-10-2018 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 392 3.6E-16 T 14-10-2018 IPR019489 Clp ATPase, C-terminal IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Gene3D G3DSA:3.30.50.30 2 50 9.3E-23 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.317 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 408 9.0E-201 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 SMART SM00994 11 50 1.3E-23 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 SMART SM00382 110 263 8.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_06370 11f4c280c998ecd6bc5d169459d15f73 421 SMART SM01086 314 409 1.2E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal IM40_09500 a993786cd1aec47bfcd2a896de293f85 175 SUPERFAMILY SSF81383 29 73 2.49E-5 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_01305 bb753836eb9c5b81a95d748a75f2da64 189 Gene3D G3DSA:3.30.160.100 1 109 6.0E-13 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like IM40_01305 bb753836eb9c5b81a95d748a75f2da64 189 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 130 183 1.0E-14 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal IM40_01305 bb753836eb9c5b81a95d748a75f2da64 189 Gene3D G3DSA:3.30.505.50 143 187 9.7E-11 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily IM40_01305 bb753836eb9c5b81a95d748a75f2da64 189 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 94 1.7E-10 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 IM40_01305 bb753836eb9c5b81a95d748a75f2da64 189 SUPERFAMILY SSF69754 1 103 7.98E-16 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 169 1.3E-57 T 14-10-2018 IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 Gene3D G3DSA:1.10.10.1590 12 86 3.1E-27 T 14-10-2018 IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 SUPERFAMILY SSF52833 14 184 1.02E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 PIRSF PIRSF000216 2 197 1.5E-69 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 Gene3D G3DSA:3.40.30.10 87 191 1.2E-29 T 14-10-2018 IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 169 7.5E-53 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07280 afb1f671a8ee494976ae4ccf7887c1b7 198 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 Pfam PF00271 Helicase conserved C-terminal domain 480 589 1.4E-14 T 14-10-2018 IPR001650 Helicase, C-terminal IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 SMART SM00490 508 590 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 Gene3D G3DSA:3.40.50.300 460 631 8.3E-50 T 14-10-2018 IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 Pfam PF00270 DEAD/DEAH box helicase 298 433 5.7E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 Pfam PF17191 RecG wedge domain 23 182 1.1E-17 T 14-10-2018 IPR033454 RecG, wedge domain IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 Gene3D G3DSA:3.40.50.300 221 453 5.0E-83 T 14-10-2018 IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 SUPERFAMILY SSF52540 454 654 7.38E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 SMART SM00487 272 462 1.6E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 SUPERFAMILY SSF50249 15 183 2.1E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 38 665 4.2E-203 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 SUPERFAMILY SSF52540 191 453 4.99E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00060 a1b81f135f9227d709c2625306f7cd71 703 Gene3D G3DSA:2.40.50.140 56 149 5.8E-15 T 14-10-2018 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 SMART SM00448 3 116 1.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Gene3D G3DSA:3.40.50.300 127 307 7.3E-53 T 14-10-2018 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Pfam PF00158 Sigma-54 interaction domain 142 303 2.2E-54 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Gene3D G3DSA:1.10.10.60 398 455 4.2E-14 T 14-10-2018 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Pfam PF02954 Bacterial regulatory protein, Fis family 410 448 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 SMART SM00382 162 300 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 SUPERFAMILY SSF46689 350 452 5.38E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 SUPERFAMILY SSF52540 142 382 1.95E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Gene3D G3DSA:1.10.8.60 308 389 1.8E-20 T 14-10-2018 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 Gene3D G3DSA:3.40.50.2300 3 124 9.0E-35 T 14-10-2018 IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site IM40_05950 ac9dc4f3169489ef5ec5b68c6d792019 458 SUPERFAMILY SSF52172 4 186 3.13E-41 T 14-10-2018 IPR011006 CheY-like superfamily IM40_00450 fe842338742a12d07d19db5a9b6924d9 311 SMART SM01133 40 291 2.4E-36 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 IM40_00450 fe842338742a12d07d19db5a9b6924d9 311 SUPERFAMILY SSF51569 20 308 1.32E-61 T 14-10-2018 IM40_00450 fe842338742a12d07d19db5a9b6924d9 311 Gene3D G3DSA:3.20.20.70 18 311 1.1E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_00450 fe842338742a12d07d19db5a9b6924d9 311 PIRSF PIRSF038992 20 311 4.0E-59 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 IM40_00450 fe842338742a12d07d19db5a9b6924d9 311 Pfam PF01791 DeoC/LacD family aldolase 41 291 1.7E-31 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 Gene3D G3DSA:3.30.70.360 180 293 3.2E-108 T 14-10-2018 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 SUPERFAMILY SSF53187 4 373 6.81E-56 T 14-10-2018 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 375 46.693 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 Gene3D G3DSA:3.40.630.10 9 362 3.2E-108 T 14-10-2018 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 9 371 1.3E-128 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 Pfam PF07687 Peptidase dimerisation domain 176 282 1.8E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain IM40_01010 b0694167de3972ecd01272c407e5d63a 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 136 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 Pfam PF01546 Peptidase family M20/M25/M40 64 370 2.0E-38 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 IM40_01010 b0694167de3972ecd01272c407e5d63a 376 SUPERFAMILY SSF55031 180 287 9.87E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 SUPERFAMILY SSF50104 2 120 2.21E-42 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 116 7.5E-46 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 PIRSF PIRSF002191 1 138 1.4E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 PRINTS PR00061 Ribosomal protein L19 signature 68 91 2.8E-44 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.8E-44 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 PRINTS PR00061 Ribosomal protein L19 signature 38 67 2.8E-44 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 PRINTS PR00061 Ribosomal protein L19 signature 8 37 2.8E-44 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 Pfam PF01245 Ribosomal protein L19 3 116 5.3E-45 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 117 29.511 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05365 897ede0dd7effb0bb96aed9677ffbcf3 139 Gene3D G3DSA:2.30.30.790 2 116 4.2E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_08290 4a51112f1226028695c32ce48617a5ff 175 SUPERFAMILY SSF81383 29 73 2.22E-5 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_08290 4a51112f1226028695c32ce48617a5ff 175 SMART SM00256 33 73 0.0047 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 ProSitePatterns PS01242 Zinc finger FPG-type signature. 251 276 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 SUPERFAMILY SSF46946 137 228 1.07E-24 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 276 1.4E-84 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 Gene3D G3DSA:3.20.190.10 2 130 1.0E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 119 1.4E-31 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 SMART SM00898 2 120 6.7E-42 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 277 38.867 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 225 2.8E-19 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 SUPERFAMILY SSF81624 2 145 6.93E-34 T 14-10-2018 IPR035937 MutM-like, N-terminal IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 SUPERFAMILY SSF57716 224 277 1.45E-12 T 14-10-2018 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 Pfam PF06827 Zinc finger found in FPG and IleRS 248 277 5.9E-5 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 Gene3D G3DSA:1.10.8.50 146 277 8.4E-42 T 14-10-2018 IM40_00715 b7efe6058ca0dc8ba8720c938c1fe1fb 277 SMART SM01232 136 228 2.7E-37 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Pfam PF04607 Region found in RelA / SpoT proteins 236 346 1.6E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Gene3D G3DSA:1.10.3210.10 1 192 1.0E-76 T 14-10-2018 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 708 2.4E-223 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 SMART SM00954 236 346 5.3E-63 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 SMART SM00471 41 153 7.2E-10 T 14-10-2018 IPR003607 HD/PDEase domain IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 SUPERFAMILY SSF109604 5 191 5.96E-69 T 14-10-2018 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Gene3D G3DSA:3.30.460.10 195 326 2.1E-44 T 14-10-2018 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 SUPERFAMILY SSF55021 641 708 1.16E-10 T 14-10-2018 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Pfam PF02824 TGS domain 386 444 4.2E-18 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 SUPERFAMILY SSF81271 372 444 9.59E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Gene3D G3DSA:3.10.20.30 379 452 5.6E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Pfam PF13291 ACT domain 632 709 9.5E-19 T 14-10-2018 IPR002912 ACT domain IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Gene3D G3DSA:3.30.70.260 633 712 4.0E-15 T 14-10-2018 IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 Pfam PF13328 HD domain 28 176 2.9E-48 T 14-10-2018 IPR003607 HD/PDEase domain IM40_06360 5c4ff98450669ba0e5c29165c9bfaf27 712 SUPERFAMILY SSF81301 182 389 4.09E-62 T 14-10-2018 IM40_08675 824f9fa4a7826945d0c60cd1c95396b6 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 210 2.6E-53 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 IM40_08675 824f9fa4a7826945d0c60cd1c95396b6 425 SUPERFAMILY SSF53756 146 419 4.02E-6 T 14-10-2018 IM40_08675 824f9fa4a7826945d0c60cd1c95396b6 425 Gene3D G3DSA:3.40.50.11720 34 209 1.8E-43 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 IM40_08675 824f9fa4a7826945d0c60cd1c95396b6 425 Gene3D G3DSA:3.40.50.2000 216 400 5.2E-57 T 14-10-2018 IM40_10410 c8bba3ba529a7e4e34942e179521777d 515 Gene3D G3DSA:1.25.40.10 246 489 8.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10410 c8bba3ba529a7e4e34942e179521777d 515 SUPERFAMILY SSF81901 309 454 3.92E-7 T 14-10-2018 IM40_00825 b8e446d9a962de951cbf09757d400be0 497 Pfam PF12860 PAS fold 205 329 4.5E-19 T 14-10-2018 IM40_00825 b8e446d9a962de951cbf09757d400be0 497 SUPERFAMILY SSF55785 190 248 3.95E-5 T 14-10-2018 IPR035965 PAS domain superfamily IM40_00825 b8e446d9a962de951cbf09757d400be0 497 Gene3D G3DSA:3.30.450.20 190 330 2.9E-7 T 14-10-2018 IM40_00825 b8e446d9a962de951cbf09757d400be0 497 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 493 1.5E-49 T 14-10-2018 IPR000160 GGDEF domain IM40_00825 b8e446d9a962de951cbf09757d400be0 497 SUPERFAMILY SSF55073 341 496 2.9E-47 T 14-10-2018 IPR029787 Nucleotide cyclase IM40_00825 b8e446d9a962de951cbf09757d400be0 497 SUPERFAMILY SSF52172 64 191 3.84E-10 T 14-10-2018 IPR011006 CheY-like superfamily IM40_00825 b8e446d9a962de951cbf09757d400be0 497 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 495 2.9E-44 T 14-10-2018 IPR000160 GGDEF domain IM40_00825 b8e446d9a962de951cbf09757d400be0 497 Gene3D G3DSA:3.30.70.270 331 497 2.3E-54 T 14-10-2018 IM40_00825 b8e446d9a962de951cbf09757d400be0 497 Gene3D G3DSA:3.40.50.2300 62 189 1.1E-9 T 14-10-2018 IM40_00825 b8e446d9a962de951cbf09757d400be0 497 SMART SM00267 325 497 6.8E-61 T 14-10-2018 IPR000160 GGDEF domain IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Gene3D G3DSA:3.30.70.870 405 482 2.8E-30 T 14-10-2018 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 112.169 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 1.2E-70 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Pfam PF14492 Elongation Factor G, domain II 403 477 1.0E-31 T 14-10-2018 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SUPERFAMILY SSF54980 602 688 1.1E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SMART SM00838 599 686 1.3E-55 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SUPERFAMILY SSF52540 6 281 1.73E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Pfam PF00679 Elongation factor G C-terminus 600 685 4.0E-32 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Gene3D G3DSA:2.40.30.10 293 404 1.7E-42 T 14-10-2018 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SUPERFAMILY SSF50447 264 403 2.02E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Gene3D G3DSA:3.30.230.10 483 686 3.0E-93 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Pfam PF03144 Elongation factor Tu domain 2 323 389 4.0E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Pfam PF03764 Elongation factor G, domain IV 478 596 2.6E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 3.1E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Gene3D G3DSA:3.30.70.240 603 673 3.0E-93 T 14-10-2018 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 Gene3D G3DSA:3.40.50.300 1 292 9.9E-115 T 14-10-2018 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SMART SM00889 479 597 3.9E-72 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SUPERFAMILY SSF54211 478 598 1.04E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_02005 7b2f558133371763a484f2a7bff0aae8 691 SUPERFAMILY SSF54980 401 479 2.99E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like IM40_08650 941b017a45b968cef02c48fa2bf00592 390 Pfam PF07690 Major Facilitator Superfamily 11 350 1.1E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_08650 941b017a45b968cef02c48fa2bf00592 390 SUPERFAMILY SSF103473 11 388 2.09E-51 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_08650 941b017a45b968cef02c48fa2bf00592 390 Gene3D G3DSA:1.20.1720.10 6 383 4.1E-77 T 14-10-2018 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Gene3D G3DSA:3.30.1490.100 252 361 1.2E-5 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Gene3D G3DSA:2.30.40.20 20 83 4.7E-44 T 14-10-2018 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 SUPERFAMILY SSF56672 12 242 2.4E-65 T 14-10-2018 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Pfam PF13438 Domain of unknown function (DUF4113) 373 423 3.3E-12 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Pfam PF00817 impB/mucB/samB family 15 159 9.7E-35 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 358 8.6E-9 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Gene3D G3DSA:3.30.70.270 14 164 4.7E-44 T 14-10-2018 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 SUPERFAMILY SSF100879 254 364 1.96E-6 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_05790 1776d26f3728ca526d1cd55380bc1506 424 Gene3D G3DSA:1.10.150.20 184 236 3.5E-6 T 14-10-2018 IM40_04455 fa65bc5913ed5ff115baa578d08372f7 212 Pfam PF02224 Cytidylate kinase 3 207 2.3E-57 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 IM40_04455 fa65bc5913ed5ff115baa578d08372f7 212 Hamap MF_00238 Cytidylate kinase [cmk]. 1 210 30.022 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 IM40_04455 fa65bc5913ed5ff115baa578d08372f7 212 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 204 2.4E-53 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 IM40_04455 fa65bc5913ed5ff115baa578d08372f7 212 SUPERFAMILY SSF52540 1 209 3.97E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04455 fa65bc5913ed5ff115baa578d08372f7 212 Gene3D G3DSA:3.40.50.300 1 211 3.1E-66 T 14-10-2018 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SUPERFAMILY SSF50249 619 698 3.51E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 690 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF00013 KH domain 555 612 2.8E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SUPERFAMILY SSF54211 2 144 5.06E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SUPERFAMILY SSF54791 554 639 5.69E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Gene3D G3DSA:2.40.50.140 621 693 7.9E-27 T 14-10-2018 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 319 3.3E-13 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 692 30.18 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SMART SM00316 619 689 5.5E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SUPERFAMILY SSF54211 292 487 2.48E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF03725 3' exoribonuclease family, domain 2 459 528 6.2E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF03725 3' exoribonuclease family, domain 2 149 210 9.0E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Gene3D G3DSA:3.30.230.70 1 229 5.6E-82 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF00575 S1 RNA binding domain 618 689 1.5E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Gene3D G3DSA:3.30.230.70 235 548 4.4E-118 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SUPERFAMILY SSF55666 449 547 2.24E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SMART SM00322 551 616 3.4E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 PIRSF PIRSF005499 1 700 6.7E-293 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 1.1E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 3.0E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 SUPERFAMILY SSF55666 149 234 3.65E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IM40_03435 9c3d9e3389c149cfd34eeb007384213f 701 Gene3D G3DSA:3.30.1370.10 549 620 3.0E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 IM40_00180 8c73ba517142c6adc4b5ec653727651c 518 Gene3D G3DSA:1.20.1720.10 17 258 6.0E-37 T 14-10-2018 IM40_00180 8c73ba517142c6adc4b5ec653727651c 518 Pfam PF07690 Major Facilitator Superfamily 21 414 1.3E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_00180 8c73ba517142c6adc4b5ec653727651c 518 Gene3D G3DSA:1.20.1250.20 265 443 6.1E-16 T 14-10-2018 IM40_00180 8c73ba517142c6adc4b5ec653727651c 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 503 2.7E-136 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 IM40_00180 8c73ba517142c6adc4b5ec653727651c 518 SUPERFAMILY SSF103473 4 507 3.92E-61 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_08595 f5725757507ecfcf94c67f21f5718e78 85 Pfam PF06965 Na+/H+ antiporter 1 1 74 6.7E-19 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 IM40_08595 f5725757507ecfcf94c67f21f5718e78 85 Gene3D G3DSA:1.20.1530.10 1 82 4.5E-21 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 SUPERFAMILY SSF81799 118 216 1.01E-35 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 PIRSF PIRSF004486 6 314 1.3E-107 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 Gene3D G3DSA:1.10.150.170 116 217 1.4E-105 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 SUPERFAMILY SSF53335 12 313 5.07E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 313 37.818 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 8 312 7.1E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 Pfam PF01795 MraW methylase family 11 312 2.3E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IM40_02810 b7ba78fc0406b8d1cf850f363d67c367 325 Gene3D G3DSA:3.40.50.150 12 311 1.4E-105 T 14-10-2018 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 SMART SM00881 4 100 6.2E-34 T 14-10-2018 IPR003781 CoA-binding GO:0048037 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 Pfam PF02629 CoA binding domain 6 99 1.1E-29 T 14-10-2018 IPR003781 CoA-binding GO:0048037 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 Pfam PF00549 CoA-ligase 151 272 1.7E-19 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 SUPERFAMILY SSF52210 123 289 1.09E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 Gene3D G3DSA:3.40.50.720 2 123 2.0E-51 T 14-10-2018 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 9.0E-37 T 14-10-2018 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.0E-37 T 14-10-2018 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 9.0E-37 T 14-10-2018 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 9.0E-37 T 14-10-2018 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 SUPERFAMILY SSF51735 1 122 2.89E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 6.0E-144 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 Gene3D G3DSA:3.40.50.261 124 288 1.7E-75 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 PIRSF PIRSF001553 1 292 5.2E-133 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site IM40_07230 a2ac3599a9f4e4cd08c50b6dd586f1fb 294 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 42.778 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_06815 05d60d33fcb58deb2d5db4ac5c5d1f15 229 Gene3D G3DSA:1.20.1280.50 20 93 1.0E-5 T 14-10-2018 IM40_06815 05d60d33fcb58deb2d5db4ac5c5d1f15 229 SUPERFAMILY SSF52047 100 216 1.08E-10 T 14-10-2018 IM40_06815 05d60d33fcb58deb2d5db4ac5c5d1f15 229 Pfam PF12937 F-box-like 33 68 9.5E-6 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_06815 05d60d33fcb58deb2d5db4ac5c5d1f15 229 SUPERFAMILY SSF81383 29 73 1.22E-7 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_06815 05d60d33fcb58deb2d5db4ac5c5d1f15 229 Gene3D G3DSA:3.80.10.10 94 229 4.9E-7 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_07305 77fd47cc74cad55846a1a9f662906473 507 Gene3D G3DSA:1.20.1720.10 1 209 6.9E-40 T 14-10-2018 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 Pfam PF07690 Major Facilitator Superfamily 5 397 4.9E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 ProSitePatterns PS00216 Sugar transport proteins signature 1. 55 71 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 64 86 9.8E-12 T 14-10-2018 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 290 314 9.8E-12 T 14-10-2018 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 325 345 9.8E-12 T 14-10-2018 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 125 149 9.8E-12 T 14-10-2018 IM40_07305 77fd47cc74cad55846a1a9f662906473 507 SUPERFAMILY SSF103473 2 492 6.93E-60 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_04365 b4253aaac618929aa4ca70a4f3054392 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 249 2.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IM40_04365 b4253aaac618929aa4ca70a4f3054392 260 SUPERFAMILY SSF161098 2 253 7.46E-52 T 14-10-2018 IPR035906 MetI-like superfamily IM40_04365 b4253aaac618929aa4ca70a4f3054392 260 Gene3D G3DSA:1.10.3720.10 1 256 1.7E-49 T 14-10-2018 IPR035906 MetI-like superfamily IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 SUPERFAMILY SSF51735 25 215 9.48E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 PIRSF PIRSF000124 24 449 1.1E-65 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 25 436 1.0E-133 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 340 439 9.8E-24 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 221 312 8.8E-30 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 SUPERFAMILY SSF48179 221 314 4.25E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 25 201 1.8E-45 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 SUPERFAMILY SSF52413 331 439 4.32E-28 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 Gene3D G3DSA:3.40.50.720 220 449 6.5E-64 T 14-10-2018 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 Gene3D G3DSA:3.40.50.720 8 218 1.1E-64 T 14-10-2018 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 SMART SM00984 340 440 3.3E-32 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_00075 e7e26e6d1cf14029ca33ab00d354ed1f 451 PIRSF PIRSF500136 14 451 2.4E-152 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 IM40_01845 307953a133f3f10c293027eddaa29036 333 Pfam PF00448 SRP54-type protein, GTPase domain 126 298 1.1E-17 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_01845 307953a133f3f10c293027eddaa29036 333 Gene3D G3DSA:3.40.50.300 121 311 4.9E-29 T 14-10-2018 IM40_01845 307953a133f3f10c293027eddaa29036 333 SUPERFAMILY SSF52540 123 283 2.94E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01845 307953a133f3f10c293027eddaa29036 333 SMART SM00962 123 312 8.6E-12 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_02115 cd55c2bb832debd245ecf5dc06ff8ab8 158 Gene3D G3DSA:3.100.10.10 65 153 1.1E-16 T 14-10-2018 IM40_02115 cd55c2bb832debd245ecf5dc06ff8ab8 158 SUPERFAMILY SSF52080 4 151 1.96E-39 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily IM40_02115 cd55c2bb832debd245ecf5dc06ff8ab8 158 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 149 3.6E-46 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02115 cd55c2bb832debd245ecf5dc06ff8ab8 158 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 149 5.2E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P IM40_02115 cd55c2bb832debd245ecf5dc06ff8ab8 158 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 19.366 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 Gene3D G3DSA:3.40.630.10 174 494 5.7E-125 T 14-10-2018 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 2.9E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 2.9E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 2.9E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 PRINTS PR00481 Cytosol aminopeptidase signature 367 382 2.9E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 2.9E-48 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 182 487 9.4E-119 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 Gene3D G3DSA:3.40.220.10 1 173 2.2E-31 T 14-10-2018 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 496 35.215 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 144 6.5E-23 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 SUPERFAMILY SSF53187 177 495 4.39E-116 T 14-10-2018 IM40_01255 5d861d34f8d0549f95f393a1664f31db 498 SUPERFAMILY SSF52949 1 180 6.47E-30 T 14-10-2018 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 297 1.3E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 40.866 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.5E-13 T 14-10-2018 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.5E-13 T 14-10-2018 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.5E-13 T 14-10-2018 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 1.5E-13 T 14-10-2018 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 7.1E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 7.1E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 7.1E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 7.1E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 Gene3D G3DSA:3.50.50.60 128 250 3.7E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 SUPERFAMILY SSF51905 1 315 2.91E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07075 0e4ee36c74e4f5bd967cffb9006706d9 343 Gene3D G3DSA:3.50.50.60 8 312 3.7E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 Pfam PF00398 Ribosomal RNA adenine dimethylase 19 275 2.0E-52 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 SMART SM00650 35 207 2.0E-69 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 275 53.108 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 Gene3D G3DSA:1.10.8.100 212 273 2.0E-19 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 79 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 Gene3D G3DSA:3.40.50.150 2 210 7.0E-73 T 14-10-2018 IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 SUPERFAMILY SSF53335 15 276 3.58E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_08610 eb0f3acb5c4cd1d8ccf639a0fd4ebba0 283 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 272 6.2E-80 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 Pfam PF03466 LysR substrate binding domain 102 294 3.4E-9 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 SUPERFAMILY SSF46785 11 90 2.16E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 1.5E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 SUPERFAMILY SSF53850 103 300 1.81E-13 T 14-10-2018 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 Gene3D G3DSA:3.40.190.290 107 297 2.5E-17 T 14-10-2018 IM40_10560 a742eba31df62b7cd2feae7a7790c754 305 Gene3D G3DSA:1.10.10.10 12 105 6.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 SMART SM00739 5 32 2.0E-5 T 14-10-2018 IPR005824 KOW IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 SUPERFAMILY SSF50104 2 103 1.69E-36 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 5 104 2.6E-37 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 Gene3D G3DSA:2.30.30.30 1 103 4.5E-38 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 Pfam PF00467 KOW motif 8 38 3.1E-6 T 14-10-2018 IPR005824 KOW IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 98 20.761 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02075 3a0cb0c027bd57952cedbb55244bbebd 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 104 6.8E-26 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04410 5abe08600add6adc6568bb2ad82c0f8b 148 SMART SM00732 12 112 1.1E-30 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 IM40_04410 5abe08600add6adc6568bb2ad82c0f8b 148 SUPERFAMILY SSF53098 12 146 3.64E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_04410 5abe08600add6adc6568bb2ad82c0f8b 148 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 12 147 24.358 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 IM40_04410 5abe08600add6adc6568bb2ad82c0f8b 148 Pfam PF03652 Holliday junction resolvase 13 144 1.3E-42 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 IM40_04410 5abe08600add6adc6568bb2ad82c0f8b 148 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 15 144 6.3E-36 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 IM40_04410 5abe08600add6adc6568bb2ad82c0f8b 148 Gene3D G3DSA:3.30.420.140 10 148 1.9E-44 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 IM40_03445 6eea53040bad7e4fb67191489e365155 295 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 211 6.6E-64 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03445 6eea53040bad7e4fb67191489e365155 295 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 25 173 8.0E-53 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 IM40_03445 6eea53040bad7e4fb67191489e365155 295 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 292 17.605 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03445 6eea53040bad7e4fb67191489e365155 295 SUPERFAMILY SSF55120 3 214 1.35E-70 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03445 6eea53040bad7e4fb67191489e365155 295 Gene3D G3DSA:3.30.2350.10 1 236 8.0E-81 T 14-10-2018 IM40_06380 3e410c0663783d341299014f3e04d543 455 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 7.9E-29 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 Gene3D G3DSA:3.30.70.1050 1 114 1.7E-29 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 426 2.5E-36 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 Gene3D G3DSA:1.10.3120.10 115 429 1.7E-71 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 Gene3D G3DSA:3.10.50.40 150 248 1.7E-71 T 14-10-2018 IM40_06380 3e410c0663783d341299014f3e04d543 455 SUPERFAMILY SSF54534 88 242 2.16E-25 T 14-10-2018 IM40_06380 3e410c0663783d341299014f3e04d543 455 Hamap MF_00303 Trigger factor [tig]. 1 434 19.258 T 14-10-2018 IPR005215 Trigger factor GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 PIRSF PIRSF003095 1 447 5.8E-107 T 14-10-2018 IPR005215 Trigger factor GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 TIGRFAM TIGR00115 tig: trigger factor 14 425 8.4E-111 T 14-10-2018 IPR005215 Trigger factor GO:0015031 IM40_06380 3e410c0663783d341299014f3e04d543 455 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 231 1.1E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IM40_06380 3e410c0663783d341299014f3e04d543 455 SUPERFAMILY SSF109998 250 443 2.09E-39 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily IM40_06380 3e410c0663783d341299014f3e04d543 455 SUPERFAMILY SSF102735 1 129 4.58E-30 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 SUPERFAMILY SSF54211 600 775 9.86E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_06365 2a593e92704c46062739ae8c2278e32e 807 TIGRFAM TIGR00763 lon: endopeptidase La 17 776 1.8E-292 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 SUPERFAMILY SSF52540 317 591 3.09E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06365 2a593e92704c46062739ae8c2278e32e 807 SMART SM00464 15 208 4.8E-62 T 14-10-2018 IPR003111 Lon, substrate-binding domain IM40_06365 2a593e92704c46062739ae8c2278e32e 807 SUPERFAMILY SSF88697 16 207 1.79E-45 T 14-10-2018 IPR015947 PUA-like superfamily IM40_06365 2a593e92704c46062739ae8c2278e32e 807 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 681 689 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 2.1E-53 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 731 749 2.1E-53 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 362 381 2.1E-53 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 600 616 2.1E-53 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 727 2.1E-53 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 358 493 1.2E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Gene3D G3DSA:1.10.8.60 497 589 3.9E-31 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Gene3D G3DSA:3.30.230.10 598 783 4.7E-77 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 575 777 6.4E-94 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Hamap MF_01973 Lon protease [lon]. 16 777 70.671 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Gene3D G3DSA:2.30.130.40 11 123 3.4E-33 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Gene3D G3DSA:3.40.50.300 319 496 1.6E-61 T 14-10-2018 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 PIRSF PIRSF001174 3 780 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 IM40_06365 2a593e92704c46062739ae8c2278e32e 807 SMART SM00382 354 506 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 206 1.6E-36 T 14-10-2018 IPR003111 Lon, substrate-binding domain IM40_06365 2a593e92704c46062739ae8c2278e32e 807 Gene3D G3DSA:1.20.58.1480 128 251 1.3E-41 T 14-10-2018 IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 9 87 1.2E-30 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 ProSitePatterns PS00195 Glutaredoxin active site. 11 27 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 PRINTS PR00160 Glutaredoxin signature 9 27 3.3E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 PRINTS PR00160 Glutaredoxin signature 51 64 3.3E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 PRINTS PR00160 Glutaredoxin signature 65 78 3.3E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 Pfam PF00462 Glutaredoxin 9 68 7.2E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 Gene3D G3DSA:3.40.30.10 3 89 1.7E-25 T 14-10-2018 IM40_06280 e75e61e40716cd4c061c1064c35eed98 89 SUPERFAMILY SSF52833 5 87 9.54E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.1E-37 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.1E-37 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 1.1E-37 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.1E-37 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.1E-37 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 Gene3D G3DSA:3.50.50.60 7 331 8.5E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 SUPERFAMILY SSF55424 346 468 7.9E-42 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 469 6.2E-172 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 Gene3D G3DSA:3.50.50.60 151 274 8.5E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PIRSF PIRSF000350 2 466 3.0E-95 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 SUPERFAMILY SSF51905 6 325 4.53E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 459 8.1E-38 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 346 367 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 1.2E-76 T 14-10-2018 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 Gene3D G3DSA:3.30.390.30 349 469 3.5E-46 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IM40_07210 b48553fa43596a4cdf6931ea68386e13 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 331 4.6E-70 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 Gene3D G3DSA:3.40.1750.10 157 462 5.4E-136 T 14-10-2018 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 PIRSF PIRSF001217 2 553 5.5E-141 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 Gene3D G3DSA:3.90.226.10 275 504 5.4E-136 T 14-10-2018 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 285 504 1.7E-49 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 Gene3D G3DSA:3.90.226.10 63 274 5.4E-136 T 14-10-2018 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 54 527 2.4E-99 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 SUPERFAMILY SSF52096 268 493 1.04E-39 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 SUPERFAMILY SSF52096 27 250 2.58E-20 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 Pfam PF01343 Peptidase family S49 355 505 4.5E-42 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 IM40_01810 c8ca6fee15af1fbd2b8c8ef8917721ee 574 Pfam PF01343 Peptidase family S49 105 258 1.1E-22 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SUPERFAMILY SSF55681 460 683 4.22E-43 T 14-10-2018 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SUPERFAMILY SSF50249 37 196 1.71E-40 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SUPERFAMILY SSF46955 401 468 1.56E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SMART SM00873 212 384 4.6E-75 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 39.994 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Gene3D G3DSA:2.40.50.140 39 154 7.1E-62 T 14-10-2018 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SMART SM00896 699 790 3.6E-32 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 790 1.6E-219 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Gene3D G3DSA:3.50.40.10 198 393 9.8E-65 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SMART SM00874 400 464 6.2E-20 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SUPERFAMILY SSF56037 198 395 1.2E-65 T 14-10-2018 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Pfam PF01588 Putative tRNA binding domain 46 145 6.4E-21 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Gene3D G3DSA:3.30.70.380 699 791 2.1E-23 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 SUPERFAMILY SSF54991 700 790 1.09E-22 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Gene3D G3DSA:3.30.56.10 400 469 3.2E-17 T 14-10-2018 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Pfam PF03483 B3/4 domain 212 384 1.8E-59 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Gene3D G3DSA:3.30.930.10 488 683 3.5E-51 T 14-10-2018 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Gene3D G3DSA:3.30.56.10 5 181 7.1E-62 T 14-10-2018 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Pfam PF03484 tRNA synthetase B5 domain 405 464 1.9E-13 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 IM40_04995 1cffa5e131c4ff4c27ad95053788ffe2 791 Pfam PF03147 Ferredoxin-fold anticodon binding domain 700 790 1.2E-22 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 IM40_01485 72afe0d382e6045f679f4e055f72fe5f 441 SUPERFAMILY SSF103473 17 430 5.49E-61 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_01485 72afe0d382e6045f679f4e055f72fe5f 441 Gene3D G3DSA:1.20.1250.20 14 204 1.7E-34 T 14-10-2018 IM40_01485 72afe0d382e6045f679f4e055f72fe5f 441 Pfam PF07690 Major Facilitator Superfamily 24 263 1.6E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_01485 72afe0d382e6045f679f4e055f72fe5f 441 Gene3D G3DSA:1.20.1250.20 223 426 6.5E-20 T 14-10-2018 IM40_11110 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_11110 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_11110 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_07955 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_07955 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_07955 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_10480 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10480 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10480 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_08440 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_08440 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_08440 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_10515 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10515 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10515 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_02610 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_02610 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_02610 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_02485 b77983ab161683c8a26d0cea38c494ad 93 Pfam PF01527 Transposase 3 71 2.2E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_02485 b77983ab161683c8a26d0cea38c494ad 93 SUPERFAMILY SSF46689 2 84 3.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_02485 b77983ab161683c8a26d0cea38c494ad 93 Gene3D G3DSA:1.10.10.60 6 84 2.9E-14 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 119 6.9E-20 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 320 332 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 425 444 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 108 128 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 155 176 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 252 278 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 2.1E-64 T 14-10-2018 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 630 4.4E-239 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 270 292 4.6E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 33 52 4.6E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 424 446 4.6E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 82 102 4.6E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 435 629 1.2E-17 T 14-10-2018 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05305 942fc1a2fed211c82ddf26cf4eea474a 634 Pfam PF00361 Proton-conducting membrane transporter 131 423 3.2E-91 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_02975 33065130e9a14b1602aa6f0adb092457 179 Pfam PF04586 Caudovirus prohead serine protease 17 155 4.8E-32 T 14-10-2018 IPR006433 Prohead protease IM40_02975 33065130e9a14b1602aa6f0adb092457 179 SUPERFAMILY SSF50789 20 147 6.98E-7 T 14-10-2018 IM40_02975 33065130e9a14b1602aa6f0adb092457 179 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 19 156 2.6E-37 T 14-10-2018 IPR006433 Prohead protease IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 SUPERFAMILY SSF53223 1 122 4.89E-31 T 14-10-2018 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.4E-31 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 Gene3D G3DSA:3.40.50.10860 8 281 2.0E-103 T 14-10-2018 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 SUPERFAMILY SSF51735 123 284 1.4E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 260 278 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 243 259 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.1E-73 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 286 9.4E-67 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 287 36.255 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 264 272 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IM40_00110 8124f0dba376226ede23f362d2d1e5d8 290 Gene3D G3DSA:3.40.50.720 6 263 2.0E-103 T 14-10-2018 IM40_05865 80a2240d501a2842fbc0cdbd9946ee27 255 Gene3D G3DSA:3.80.10.10 26 248 4.0E-29 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_05865 80a2240d501a2842fbc0cdbd9946ee27 255 SUPERFAMILY SSF52047 53 242 1.57E-27 T 14-10-2018 IM40_05865 80a2240d501a2842fbc0cdbd9946ee27 255 Pfam PF13516 Leucine Rich repeat 221 241 0.0042 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_05865 80a2240d501a2842fbc0cdbd9946ee27 255 Pfam PF13516 Leucine Rich repeat 102 119 0.29 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_05865 80a2240d501a2842fbc0cdbd9946ee27 255 SMART SM00368 101 128 14.0 T 14-10-2018 IM40_05865 80a2240d501a2842fbc0cdbd9946ee27 255 SMART SM00368 220 247 0.5 T 14-10-2018 IM40_00980 7694b2fd154b3897ded70b8de91f4e81 167 ProSitePatterns PS00360 Ribosomal protein S9 signature. 106 124 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 IM40_00980 7694b2fd154b3897ded70b8de91f4e81 167 Pfam PF00380 Ribosomal protein S9/S16 47 167 6.0E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 IM40_00980 7694b2fd154b3897ded70b8de91f4e81 167 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 38 167 32.404 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid IM40_00980 7694b2fd154b3897ded70b8de91f4e81 167 Gene3D G3DSA:3.30.230.10 39 167 4.1E-50 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00980 7694b2fd154b3897ded70b8de91f4e81 167 SUPERFAMILY SSF54211 42 167 9.48E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 Gene3D G3DSA:1.10.1060.10 130 261 1.5E-57 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 Gene3D G3DSA:3.10.20.30 17 129 3.7E-44 T 14-10-2018 IPR012675 Beta-grasp domain superfamily IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 7.6E-81 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 3.6E-9 T 14-10-2018 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 SUPERFAMILY SSF54292 26 129 2.63E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 SUPERFAMILY SSF46548 131 258 4.71E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 133 1.8E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09200 6b5865f41955385a4914bfe2e92ffa31 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_01200 71460104124ea74c66f87db42124a365 309 Gene3D G3DSA:3.30.70.100 1 95 3.1E-33 T 14-10-2018 IM40_01200 71460104124ea74c66f87db42124a365 309 Gene3D G3DSA:3.40.250.10 96 248 4.7E-49 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily IM40_01200 71460104124ea74c66f87db42124a365 309 Pfam PF00581 Rhodanese-like domain 118 209 9.5E-7 T 14-10-2018 IPR001763 Rhodanese-like domain IM40_01200 71460104124ea74c66f87db42124a365 309 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 253 43.627 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 IM40_01200 71460104124ea74c66f87db42124a365 309 SMART SM00450 112 213 1.8E-18 T 14-10-2018 IPR001763 Rhodanese-like domain IM40_01200 71460104124ea74c66f87db42124a365 309 SUPERFAMILY SSF52821 89 224 1.65E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily IM40_04025 bc18cf98a1474392f49d977ca552c46c 201 Pfam PF13505 Outer membrane protein beta-barrel domain 10 199 1.7E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel IM40_04025 bc18cf98a1474392f49d977ca552c46c 201 SUPERFAMILY SSF56925 26 201 1.7E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IM40_04025 bc18cf98a1474392f49d977ca552c46c 201 Gene3D G3DSA:2.40.160.20 26 201 5.0E-10 T 14-10-2018 IM40_06155 e12e598176133b78b8a5dcdc93ab597e 68 Gene3D G3DSA:1.10.1470.10 1 67 7.1E-26 T 14-10-2018 IPR036629 YjbJ superfamily IM40_06155 e12e598176133b78b8a5dcdc93ab597e 68 SUPERFAMILY SSF69047 5 67 2.09E-21 T 14-10-2018 IPR036629 YjbJ superfamily IM40_06155 e12e598176133b78b8a5dcdc93ab597e 68 Pfam PF05532 CsbD-like 6 58 1.3E-19 T 14-10-2018 IPR008462 CsbD-like domain IM40_06155 e12e598176133b78b8a5dcdc93ab597e 68 PIRSF PIRSF039008 1 68 1.0E-26 T 14-10-2018 IPR026042 Stress response protein YjbJ IM40_11360 915d2fa65931feae161af2eff8c6e0b5 604 SUPERFAMILY SSF160443 437 499 8.76E-8 T 14-10-2018 IPR036063 Smr domain superfamily IM40_11360 915d2fa65931feae161af2eff8c6e0b5 604 Pfam PF01713 Smr domain 439 506 7.0E-9 T 14-10-2018 IPR002625 Smr domain IM40_11360 915d2fa65931feae161af2eff8c6e0b5 604 Gene3D G3DSA:3.30.1370.110 436 520 3.5E-7 T 14-10-2018 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 248 37.543 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 156 170 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 34 49 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 23 246 4.1E-86 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 Gene3D G3DSA:3.40.50.150 29 248 1.1E-79 T 14-10-2018 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 Pfam PF01209 ubiE/COQ5 methyltransferase family 19 247 2.5E-92 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 IM40_00710 92f79a11ea0371d61babe726a7563e11 250 SUPERFAMILY SSF53335 13 244 2.01E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 SUPERFAMILY SSF48256 28 444 3.53E-161 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 Gene3D G3DSA:1.10.230.10 283 392 7.0E-143 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 28 436 4.3E-224 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 Pfam PF00285 Citrate synthase, C-terminal domain 61 427 1.6E-131 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 Gene3D G3DSA:2.20.28.60 17 65 6.1E-20 T 14-10-2018 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PRINTS PR00143 Citrate synthase signature 256 284 4.2E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PRINTS PR00143 Citrate synthase signature 311 331 4.2E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PRINTS PR00143 Citrate synthase signature 375 391 4.2E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PRINTS PR00143 Citrate synthase signature 395 409 4.2E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PRINTS PR00143 Citrate synthase signature 180 193 4.2E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PRINTS PR00143 Citrate synthase signature 234 249 4.2E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 ProSitePatterns PS00480 Citrate synthase signature. 318 330 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 PIRSF PIRSF001369 52 444 7.7E-163 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type IM40_05480 e267174b4b2a18d187f9d6b1ac7442a7 444 Gene3D G3DSA:1.10.580.10 72 427 7.0E-143 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1108 1120 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:2.40.50.100 747 827 2.3E-32 T 14-10-2018 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Pfam PF10385 RNA polymerase beta subunit external 1 domain 624 689 1.4E-21 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:2.40.270.10 1067 1288 1.9E-82 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:3.90.1100.10 680 746 1.7E-21 T 14-10-2018 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Pfam PF04565 RNA polymerase Rpb2, domain 3 546 614 1.5E-31 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 SUPERFAMILY SSF64484 11 1385 0.0 T 14-10-2018 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:3.90.1100.10 476 664 3.5E-70 T 14-10-2018 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:3.90.1100.10 18 163 2.4E-54 T 14-10-2018 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Pfam PF04561 RNA polymerase Rpb2, domain 2 381 487 2.4E-19 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:3.90.1110.10 350 475 5.0E-33 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1387 12.407 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1384 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Pfam PF00562 RNA polymerase Rpb2, domain 6 750 1310 1.9E-166 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:2.40.50.150 861 986 1.1E-45 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Pfam PF04560 RNA polymerase Rpb2, domain 7 1312 1385 2.7E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:3.90.1110.10 164 269 9.5E-22 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Gene3D G3DSA:3.90.1800.10 1298 1352 8.6E-11 T 14-10-2018 IM40_06215 2c1451f7c1d209cc30827f908f7edf7f 1387 Pfam PF04563 RNA polymerase beta subunit 27 532 7.3E-32 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_05695 171407f9038e78fb0d4c7778d076af66 393 Gene3D G3DSA:1.10.260.50 17 268 8.0E-118 T 14-10-2018 IM40_05695 171407f9038e78fb0d4c7778d076af66 393 SUPERFAMILY SSF53383 5 362 2.5E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_05695 171407f9038e78fb0d4c7778d076af66 393 Gene3D G3DSA:3.40.640.10 62 227 8.0E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_05695 171407f9038e78fb0d4c7778d076af66 393 PIRSF PIRSF005572 3 370 8.3E-123 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 IM40_05695 171407f9038e78fb0d4c7778d076af66 393 Gene3D G3DSA:3.90.1150.10 6 357 8.0E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_05695 171407f9038e78fb0d4c7778d076af66 393 Pfam PF00266 Aminotransferase class-V 6 355 1.5E-64 T 14-10-2018 IPR000192 Aminotransferase class V domain IM40_00260 22ca5409c4c24f3b4a107e9dc37cc965 399 Gene3D G3DSA:1.20.81.30 49 164 3.6E-20 T 14-10-2018 IM40_00260 22ca5409c4c24f3b4a107e9dc37cc965 399 Pfam PF00482 Type II secretion system (T2SS), protein F 268 389 2.0E-14 T 14-10-2018 IPR018076 Type II secretion system F domain IM40_00260 22ca5409c4c24f3b4a107e9dc37cc965 399 Pfam PF00482 Type II secretion system (T2SS), protein F 67 186 1.7E-20 T 14-10-2018 IPR018076 Type II secretion system F domain IM40_00260 22ca5409c4c24f3b4a107e9dc37cc965 399 Gene3D G3DSA:1.20.81.30 250 361 1.0E-16 T 14-10-2018 IM40_05405 59985ad98506c57d46f8ecb14d6dea86 306 SUPERFAMILY SSF56349 4 295 1.06E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IM40_05405 59985ad98506c57d46f8ecb14d6dea86 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 303 51.029 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD IM40_05405 59985ad98506c57d46f8ecb14d6dea86 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 95 5.9E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 IM40_05405 59985ad98506c57d46f8ecb14d6dea86 306 Pfam PF00589 Phage integrase family 139 288 6.3E-37 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IM40_05405 59985ad98506c57d46f8ecb14d6dea86 306 Gene3D G3DSA:1.10.443.10 120 297 6.0E-50 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IM40_05405 59985ad98506c57d46f8ecb14d6dea86 306 Gene3D G3DSA:1.10.150.130 6 105 1.5E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal IM40_02025 548ee1e28139c64c16f3221b6c4c9d53 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 8.4E-68 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 IM40_02025 548ee1e28139c64c16f3221b6c4c9d53 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 3.2E-72 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02025 548ee1e28139c64c16f3221b6c4c9d53 206 SUPERFAMILY SSF52166 2 205 1.05E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02025 548ee1e28139c64c16f3221b6c4c9d53 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 32.775 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02025 548ee1e28139c64c16f3221b6c4c9d53 206 Gene3D G3DSA:3.40.1370.10 2 206 1.7E-77 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 IM40_07020 540e94d85462d7ed84aeb11b6aa146d5 303 SUPERFAMILY SSF103481 199 295 2.09E-9 T 14-10-2018 IM40_07020 540e94d85462d7ed84aeb11b6aa146d5 303 Pfam PF00892 EamA-like transporter family 163 291 2.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_07020 540e94d85462d7ed84aeb11b6aa146d5 303 Pfam PF00892 EamA-like transporter family 13 144 2.9E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_07020 540e94d85462d7ed84aeb11b6aa146d5 303 SUPERFAMILY SSF103481 47 146 2.35E-12 T 14-10-2018 IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 Pfam PF00664 ABC transporter transmembrane region 39 311 5.1E-35 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 SUPERFAMILY SSF52540 350 593 7.5E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 SMART SM00382 383 569 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 Pfam PF00005 ABC transporter 374 523 2.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 Gene3D G3DSA:1.20.1560.10 23 347 6.0E-114 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 SUPERFAMILY SSF90123 30 322 4.45E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 Gene3D G3DSA:3.40.50.300 348 597 5.1E-94 T 14-10-2018 IM40_04385 cf00e443743fc45a3ffdf37ee09f32a5 597 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_07790 80d5b578575296bed874d32269afca39 373 Pfam PF01098 Cell cycle protein 18 362 1.0E-96 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_07790 80d5b578575296bed874d32269afca39 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 362 7.5E-124 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_07790 80d5b578575296bed874d32269afca39 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 8 365 25.997 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_07790 80d5b578575296bed874d32269afca39 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 320 344 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 Gene3D G3DSA:3.40.50.720 3 353 2.3E-139 T 14-10-2018 IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 SMART SM01002 149 297 7.7E-89 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.7E-82 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.1E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 SMART SM01003 4 137 1.4E-76 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 Gene3D G3DSA:3.40.50.720 130 305 2.3E-139 T 14-10-2018 IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 1.3E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 SUPERFAMILY SSF51735 137 303 4.17E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 PIRSF PIRSF000183 1 371 6.2E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 IM40_07530 0c8ab93aac83bcbd03bbc70aa1f93f0a 372 SUPERFAMILY SSF52283 1 360 5.02E-65 T 14-10-2018 IM40_10755 b41c51e8b761613eccbd6d8e46e002f2 127 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 79 91 2.6E-5 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 IM40_10755 b41c51e8b761613eccbd6d8e46e002f2 127 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 40 50 2.6E-5 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 IM40_10755 b41c51e8b761613eccbd6d8e46e002f2 127 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 51 62 2.6E-5 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 IM40_10755 b41c51e8b761613eccbd6d8e46e002f2 127 SUPERFAMILY SSF51306 6 125 7.5E-26 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_10755 b41c51e8b761613eccbd6d8e46e002f2 127 Pfam PF00717 Peptidase S24-like 45 108 3.3E-9 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_10755 b41c51e8b761613eccbd6d8e46e002f2 127 Gene3D G3DSA:2.10.109.10 13 126 3.9E-35 T 14-10-2018 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 Gene3D G3DSA:3.30.160.20 211 297 6.1E-96 T 14-10-2018 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 Pfam PF00472 RF-1 domain 212 321 4.7E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 SUPERFAMILY SSF75620 13 354 5.36E-125 T 14-10-2018 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 SMART SM00937 64 179 3.9E-57 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 Pfam PF03462 PCRF domain 12 204 5.3E-65 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 38.988 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 Gene3D G3DSA:3.30.70.1660 112 343 6.1E-96 T 14-10-2018 IM40_04620 0e1db8bfa2da51210b8061c26bd3fde2 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 358 1.0E-151 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 IM40_09080 977c2e00183e43ed4c8e5dcc0d1e3a96 141 Gene3D G3DSA:3.30.720.120 11 76 1.0E-10 T 14-10-2018 IM40_09080 977c2e00183e43ed4c8e5dcc0d1e3a96 141 Gene3D G3DSA:3.30.720.110 85 141 8.2E-17 T 14-10-2018 IM40_09080 977c2e00183e43ed4c8e5dcc0d1e3a96 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 18 135 8.1E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IM40_09080 977c2e00183e43ed4c8e5dcc0d1e3a96 141 SUPERFAMILY SSF54593 14 137 3.22E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IM40_02145 68230852afadabc5082d70248ba5d6c1 143 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.32 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02145 68230852afadabc5082d70248ba5d6c1 143 Pfam PF01196 Ribosomal protein L17 20 116 7.6E-31 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02145 68230852afadabc5082d70248ba5d6c1 143 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02145 68230852afadabc5082d70248ba5d6c1 143 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 2.3E-37 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02145 68230852afadabc5082d70248ba5d6c1 143 Gene3D G3DSA:3.90.1030.10 1 116 7.4E-44 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02145 68230852afadabc5082d70248ba5d6c1 143 SUPERFAMILY SSF64263 1 119 6.02E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01890 cbb58200a1161816ae35107373ecafbc 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 76 9.5E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain IM40_01890 cbb58200a1161816ae35107373ecafbc 97 SUPERFAMILY SSF54909 1 91 1.5E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel IM40_01890 cbb58200a1161816ae35107373ecafbc 97 Gene3D G3DSA:3.30.70.100 1 97 3.8E-25 T 14-10-2018 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 Gene3D G3DSA:3.30.160.20 170 265 1.1E-96 T 14-10-2018 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 Pfam PF03462 PCRF domain 4 164 1.7E-47 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 309 2.6E-142 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 310 33.448 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 Pfam PF00472 RF-1 domain 173 282 1.7E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 Gene3D G3DSA:3.30.70.1660 74 303 1.1E-96 T 14-10-2018 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 SMART SM00937 29 139 3.2E-46 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 IM40_04470 05414b4852f015ccf83b6e91d328b83c 317 SUPERFAMILY SSF75620 2 308 4.84E-119 T 14-10-2018 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 Gene3D G3DSA:3.30.110.10 88 180 1.6E-36 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 85 3.0E-30 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 Gene3D G3DSA:3.10.20.80 13 87 9.2E-33 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 ProSitePatterns PS00938 Initiation factor 3 signature. 69 82 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 SUPERFAMILY SSF55200 93 179 1.1E-31 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 180 29.169 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 180 1.4E-67 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 SUPERFAMILY SSF54364 16 89 1.44E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 IM40_03105 0080aab0775aee1b837edbcf5430edbf 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 94 179 2.3E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 494 5.2E-132 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 494 30.043 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 Gene3D G3DSA:3.90.190.20 350 501 1.8E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 Pfam PF08245 Mur ligase middle domain 117 324 2.0E-46 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 SUPERFAMILY SSF53623 111 343 7.44E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 Gene3D G3DSA:3.40.1390.10 4 108 2.7E-11 T 14-10-2018 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 Gene3D G3DSA:3.40.1190.10 110 348 3.5E-67 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 Pfam PF02875 Mur ligase family, glutamate ligase domain 344 430 1.0E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 SUPERFAMILY SSF53244 344 496 6.15E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02825 9bb781c97c807d5e29aad5ed69f4c61b 502 SUPERFAMILY SSF63418 19 105 1.44E-7 T 14-10-2018 IPR035911 MurE/MurF, N-terminal IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 311 4.1E-125 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 3.3E-28 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 SUPERFAMILY SSF56327 144 311 1.87E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 5.6E-41 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 PIRSF PIRSF000102 1 313 7.3E-103 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 Gene3D G3DSA:3.40.50.720 1 145 1.8E-57 T 14-10-2018 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 4.2E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 4.2E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 4.2E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 4.2E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 4.2E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 Gene3D G3DSA:3.90.110.10 147 313 3.1E-61 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 SUPERFAMILY SSF51735 5 144 1.36E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_07240 dd72c1534a539dadd5bc5353420e2c73 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 45.055 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 Pfam PF06418 CTP synthase N-terminus 3 265 2.3E-119 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 Hamap MF_01227 CTP synthase [pyrG]. 2 542 49.7 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 Gene3D G3DSA:3.40.50.300 1 285 1.0E-122 T 14-10-2018 IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 Gene3D G3DSA:3.40.50.880 286 546 5.9E-93 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 Pfam PF00117 Glutamine amidotransferase class-I 302 537 3.1E-52 T 14-10-2018 IPR017926 Glutamine amidotransferase IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 537 2.0E-227 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 SUPERFAMILY SSF52540 1 267 6.88E-117 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03145 4bfb00b4ef8c2cb65bbbfd62b468808d 546 SUPERFAMILY SSF52317 289 542 1.78E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_01530 ca49c4778ec43bd76fa71b18ab91fc83 280 Gene3D G3DSA:1.20.120.350 22 136 1.1E-16 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily IM40_01530 ca49c4778ec43bd76fa71b18ab91fc83 280 Gene3D G3DSA:1.10.287.70 137 236 2.3E-19 T 14-10-2018 IM40_01530 ca49c4778ec43bd76fa71b18ab91fc83 280 SUPERFAMILY SSF81324 33 242 4.47E-16 T 14-10-2018 IM40_01530 ca49c4778ec43bd76fa71b18ab91fc83 280 Pfam PF00520 Ion transport protein 34 245 5.1E-26 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 IM40_10825 3c1037bee9790124488361b605e31988 344 Pfam PF00665 Integrase core domain 118 241 6.1E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_10825 3c1037bee9790124488361b605e31988 344 Gene3D G3DSA:1.10.10.60 3 42 4.7E-6 T 14-10-2018 IM40_10825 3c1037bee9790124488361b605e31988 344 Gene3D G3DSA:3.30.420.10 116 294 1.8E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_10825 3c1037bee9790124488361b605e31988 344 SUPERFAMILY SSF53098 117 289 6.22E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_07450 b6596e2939a306678e0e994637aeb249 592 Pfam PF00664 ABC transporter transmembrane region 31 297 3.1E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IM40_07450 b6596e2939a306678e0e994637aeb249 592 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_07450 b6596e2939a306678e0e994637aeb249 592 SUPERFAMILY SSF90123 18 329 1.07E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_07450 b6596e2939a306678e0e994637aeb249 592 Gene3D G3DSA:3.40.50.300 340 591 1.4E-90 T 14-10-2018 IM40_07450 b6596e2939a306678e0e994637aeb249 592 SUPERFAMILY SSF52540 340 587 4.65E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07450 b6596e2939a306678e0e994637aeb249 592 SMART SM00382 376 562 6.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_07450 b6596e2939a306678e0e994637aeb249 592 Gene3D G3DSA:1.20.1560.10 3 334 2.5E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_07450 b6596e2939a306678e0e994637aeb249 592 Pfam PF00005 ABC transporter 367 516 1.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_10905 e06f06ed48f21bdc96ae82f449785cc8 200 Gene3D G3DSA:3.80.10.10 31 141 5.8E-12 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_10905 e06f06ed48f21bdc96ae82f449785cc8 200 SUPERFAMILY SSF52047 69 127 1.71E-7 T 14-10-2018 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SUPERFAMILY SSF55785 11 124 8.37E-26 T 14-10-2018 IPR035965 PAS domain superfamily IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SUPERFAMILY SSF55781 136 317 2.94E-46 T 14-10-2018 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Gene3D G3DSA:3.30.565.10 598 747 1.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Pfam PF01590 GAF domain 150 310 6.5E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Gene3D G3DSA:3.30.450.270 322 498 6.5E-147 T 14-10-2018 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Pfam PF00512 His Kinase A (phospho-acceptor) domain 529 594 1.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SUPERFAMILY SSF47384 512 594 5.3E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 PRINTS PR01033 Phytochrome signature 471 489 4.2E-12 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 PRINTS PR01033 Phytochrome signature 436 455 4.2E-12 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 PRINTS PR01033 Phytochrome signature 251 272 4.2E-12 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 PRINTS PR01033 Phytochrome signature 164 183 4.2E-12 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SMART SM00388 528 596 8.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Gene3D G3DSA:3.30.450.20 23 254 6.5E-147 T 14-10-2018 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Gene3D G3DSA:3.30.450.40 18 484 6.5E-147 T 14-10-2018 IPR029016 GAF-like domain superfamily IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Gene3D G3DSA:1.10.287.130 499 594 3.4E-14 T 14-10-2018 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Pfam PF00360 Phytochrome region 329 511 2.4E-42 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SMART SM00387 638 747 3.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Pfam PF08446 PAS fold 19 123 9.3E-18 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SUPERFAMILY SSF55874 596 746 6.81E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_11140 d4a27729635ced3b7d03115998057ff5 747 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 641 746 1.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SMART SM00065 149 323 0.0068 T 14-10-2018 IPR003018 GAF domain GO:0005515 IM40_11140 d4a27729635ced3b7d03115998057ff5 747 SUPERFAMILY SSF55781 301 506 4.12E-41 T 14-10-2018 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 SUPERFAMILY SSF69189 273 361 7.65E-19 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 Gene3D G3DSA:3.40.710.10 20 267 1.8E-80 T 14-10-2018 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 Gene3D G3DSA:2.60.410.10 269 359 1.2E-19 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 SMART SM00936 269 359 5.0E-22 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 249 4.2E-65 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 SUPERFAMILY SSF56601 3 268 4.1E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 274 359 2.9E-17 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 56 67 9.5E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 9.5E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IM40_05250 b0d873c428f7a1b3c4f731a4a1d65960 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 9.5E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 Pfam PF00085 Thioredoxin 18 117 2.0E-23 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 ProSitePatterns PS00194 Thioredoxin family active site. 36 54 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 SUPERFAMILY SSF52833 12 120 3.57E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 PRINTS PR00421 Thioredoxin family signature 35 43 8.9E-6 T 14-10-2018 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 PRINTS PR00421 Thioredoxin family signature 83 94 8.9E-6 T 14-10-2018 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 PRINTS PR00421 Thioredoxin family signature 43 52 8.9E-6 T 14-10-2018 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 Pfam PF14559 Tetratricopeptide repeat 137 200 1.8E-5 T 14-10-2018 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 Gene3D G3DSA:1.25.40.10 127 206 9.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 Gene3D G3DSA:3.40.30.10 8 120 2.2E-27 T 14-10-2018 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 SUPERFAMILY SSF48452 127 263 1.62E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 Pfam PF14561 Tetratricopeptide repeat 215 296 1.5E-21 T 14-10-2018 IM40_00345 6f925049e6b0e005e3c7816e9de7d5e8 297 Gene3D G3DSA:1.25.40.10 210 296 2.5E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 1.5E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 2.6E-15 T 14-10-2018 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 SUPERFAMILY SSF54292 1 74 8.08E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 SUPERFAMILY SSF53706 213 630 7.44E-93 T 14-10-2018 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Pfam PF00384 Molybdopterin oxidoreductase 271 602 4.4E-62 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 SUPERFAMILY SSF54862 75 210 1.93E-35 T 14-10-2018 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 600 1.8E-221 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Gene3D G3DSA:3.10.20.740 1 123 1.2E-40 T 14-10-2018 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 SMART SM00929 83 123 1.2E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 641 675 1.1E-8 T 14-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Gene3D G3DSA:3.30.70.20 124 204 6.0E-6 T 14-10-2018 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07290 5ac8d049a5267c358e783c6c7f7f5717 684 Gene3D G3DSA:3.40.50.740 465 635 1.3E-21 T 14-10-2018 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Gene3D G3DSA:1.10.8.10 151 199 2.4E-8 T 14-10-2018 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.6E-10 T 14-10-2018 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 SUPERFAMILY SSF47781 66 135 1.75E-19 T 14-10-2018 IPR010994 RuvA domain 2-like IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Pfam PF07499 RuvA, C-terminal domain 153 198 1.2E-10 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 SUPERFAMILY SSF46929 154 200 1.09E-7 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 1.2E-42 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Gene3D G3DSA:2.40.50.140 1 66 4.4E-22 T 14-10-2018 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 SUPERFAMILY SSF50249 1 63 4.23E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 28.117 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Pfam PF01330 RuvA N terminal domain 1 62 3.4E-20 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 IM40_06715 f5b9cde16f6d215de6a73ca78d03c407 202 Gene3D G3DSA:1.10.150.20 67 137 1.0E-21 T 14-10-2018 IM40_09090 b6a3d5ef345948d159e2fc8622c2488e 300 Gene3D G3DSA:3.40.190.290 91 290 1.8E-33 T 14-10-2018 IM40_09090 b6a3d5ef345948d159e2fc8622c2488e 300 Pfam PF03466 LysR substrate binding domain 87 290 4.4E-25 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_09090 b6a3d5ef345948d159e2fc8622c2488e 300 Gene3D G3DSA:1.10.10.10 1 90 3.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_09090 b6a3d5ef345948d159e2fc8622c2488e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 2.9E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_09090 b6a3d5ef345948d159e2fc8622c2488e 300 SUPERFAMILY SSF46785 1 110 1.7E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_09090 b6a3d5ef345948d159e2fc8622c2488e 300 SUPERFAMILY SSF53850 88 291 7.6E-29 T 14-10-2018 IM40_02020 3608e27c358965b66ef440c00694a7b1 257 Pfam PF00297 Ribosomal protein L3 70 180 3.4E-14 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02020 3608e27c358965b66ef440c00694a7b1 257 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 3.2E-84 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02020 3608e27c358965b66ef440c00694a7b1 257 Gene3D G3DSA:2.40.30.10 130 211 8.9E-16 T 14-10-2018 IM40_02020 3608e27c358965b66ef440c00694a7b1 257 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.5 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02020 3608e27c358965b66ef440c00694a7b1 257 Gene3D G3DSA:2.40.50.620 32 97 1.9E-22 T 14-10-2018 IM40_02020 3608e27c358965b66ef440c00694a7b1 257 SUPERFAMILY SSF50447 1 219 2.47E-81 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_02020 3608e27c358965b66ef440c00694a7b1 257 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site IM40_05295 b40423b3754e04dcfc857ac6f6e96577 475 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 1 464 16.886 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 IM40_05295 b40423b3754e04dcfc857ac6f6e96577 475 Pfam PF00361 Proton-conducting membrane transporter 114 408 2.9E-73 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05295 b40423b3754e04dcfc857ac6f6e96577 475 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 1 463 4.5E-143 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 480 589 5.7E-31 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Gene3D G3DSA:2.40.110.10 160 286 3.4E-23 T 14-10-2018 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 19 1.4E-4 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 SUPERFAMILY SSF47203 287 466 3.38E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 5.5E-20 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 156 1.8E-12 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 1.9E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 SUPERFAMILY SSF56645 36 278 6.54E-53 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Gene3D G3DSA:1.10.540.10 10 158 5.5E-17 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IM40_00485 fa8cb8dc9eb35deb9d41c2d25a80f375 597 Gene3D G3DSA:1.20.140.10 287 455 3.5E-43 T 14-10-2018 IM40_04055 36ad1175dc34f6ec2064fd37bdbc2289 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 302 48.483 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD IM40_04055 36ad1175dc34f6ec2064fd37bdbc2289 311 Gene3D G3DSA:1.10.150.130 1 92 8.1E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal IM40_04055 36ad1175dc34f6ec2064fd37bdbc2289 311 Pfam PF00589 Phage integrase family 105 287 4.0E-40 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IM40_04055 36ad1175dc34f6ec2064fd37bdbc2289 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 83 1.8E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 IM40_04055 36ad1175dc34f6ec2064fd37bdbc2289 311 Gene3D G3DSA:1.10.443.10 104 294 1.4E-50 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IM40_04055 36ad1175dc34f6ec2064fd37bdbc2289 311 SUPERFAMILY SSF56349 3 294 5.3E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IM40_04700 0aaada247593902366d43488fa4d92aa 380 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 IM40_04700 0aaada247593902366d43488fa4d92aa 380 SMART SM01003 4 145 2.1E-56 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IM40_04700 0aaada247593902366d43488fa4d92aa 380 SMART SM01002 154 318 3.3E-82 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IM40_04700 0aaada247593902366d43488fa4d92aa 380 Gene3D G3DSA:3.40.50.720 145 325 5.7E-143 T 14-10-2018 IM40_04700 0aaada247593902366d43488fa4d92aa 380 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 IM40_04700 0aaada247593902366d43488fa4d92aa 380 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 149 375 2.6E-73 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IM40_04700 0aaada247593902366d43488fa4d92aa 380 SUPERFAMILY SSF52283 1 176 6.8E-51 T 14-10-2018 IM40_04700 0aaada247593902366d43488fa4d92aa 380 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 145 2.8E-41 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IM40_04700 0aaada247593902366d43488fa4d92aa 380 Gene3D G3DSA:3.40.50.720 3 372 5.7E-143 T 14-10-2018 IM40_04700 0aaada247593902366d43488fa4d92aa 380 SUPERFAMILY SSF51735 145 319 1.01E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 Gene3D G3DSA:3.40.1190.20 1 300 7.1E-82 T 14-10-2018 IPR029056 Ribokinase-like IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 Hamap MF_01987 Ribokinase [rbsK]. 1 296 21.249 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 SUPERFAMILY SSF53613 2 295 2.03E-66 T 14-10-2018 IPR029056 Ribokinase-like IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 PRINTS PR00990 Ribokinase signature 168 183 3.9E-29 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 PRINTS PR00990 Ribokinase signature 4 25 3.9E-29 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 PRINTS PR00990 Ribokinase signature 102 115 3.9E-29 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 PRINTS PR00990 Ribokinase signature 212 223 3.9E-29 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 PRINTS PR00990 Ribokinase signature 31 50 3.9E-29 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 IM40_07565 1a7327e3042fdc09db3c9cb416060c99 307 Pfam PF00294 pfkB family carbohydrate kinase 2 289 2.6E-50 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Pfam PF01411 tRNA synthetases class II (A) 7 555 4.9E-212 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 SMART SM00863 653 703 2.3E-23 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 225 238 3.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 3.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 3.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 3.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 3.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Gene3D G3DSA:3.30.930.10 3 241 2.1E-106 T 14-10-2018 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Pfam PF02272 DHHA1 domain 739 875 8.2E-20 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 860 5.5E-291 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Gene3D G3DSA:3.30.980.10 556 702 9.3E-46 T 14-10-2018 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Gene3D G3DSA:2.40.30.130 468 552 8.9E-8 T 14-10-2018 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Gene3D G3DSA:3.10.310.40 769 879 4.3E-28 T 14-10-2018 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 880 186.432 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 SUPERFAMILY SSF55186 552 720 1.83E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 SUPERFAMILY SSF50447 452 552 2.86E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 SUPERFAMILY SSF101353 245 458 6.28E-59 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 703 4.5E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 Gene3D G3DSA:3.30.54.20 624 684 9.3E-46 T 14-10-2018 IM40_01370 a614167f860d6ff0ed7f98102a278b99 880 SUPERFAMILY SSF55681 2 244 1.99E-103 T 14-10-2018 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Gene3D G3DSA:3.40.50.300 318 496 1.4E-19 T 14-10-2018 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Gene3D G3DSA:1.25.40.10 667 902 8.3E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Pfam PF00196 Bacterial regulatory proteins, luxR family 33 86 3.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00421 31 88 3.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Pfam PF00931 NB-ARC domain 347 599 1.5E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 ProSitePatterns PS00622 LuxR-type HTH domain signature. 48 75 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SUPERFAMILY SSF48452 725 897 1.04E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 48 64 1.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 64 76 1.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 34 48 1.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Gene3D G3DSA:1.10.10.10 14 96 9.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Gene3D G3DSA:1.25.40.10 903 1093 4.1E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SUPERFAMILY SSF48452 899 1039 1.79E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SUPERFAMILY SSF52540 329 573 3.02E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SUPERFAMILY SSF46894 31 90 1.84E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Pfam PF13424 Tetratricopeptide repeat 904 977 3.0E-15 T 14-10-2018 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 Pfam PF13424 Tetratricopeptide repeat 826 894 2.8E-12 T 14-10-2018 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00028 820 853 6.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00028 904 937 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00028 778 811 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00028 988 1021 65.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00028 862 895 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08560 238879d0fe3114eb4e4b27c422fefe34 1095 SMART SM00028 946 979 0.28 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 239 4.5E-57 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 SUPERFAMILY SSF55120 1 245 2.01E-82 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 Gene3D G3DSA:3.30.70.580 1 106 3.6E-32 T 14-10-2018 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 34.134 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 Gene3D G3DSA:3.30.70.660 107 244 2.4E-46 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 Pfam PF01416 tRNA pseudouridine synthase 144 246 7.1E-31 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 Pfam PF01416 tRNA pseudouridine synthase 8 104 7.9E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_01715 9a0a20629327867a32cbc0558ba28250 246 PIRSF PIRSF001430 1 246 6.5E-76 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 SMART SM00382 49 309 8.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 436 2.4E-185 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 436 41.343 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 192 322 4.9E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 SMART SM01086 328 422 5.9E-18 T 14-10-2018 IPR019489 Clp ATPase, C-terminal IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 2.6E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 Gene3D G3DSA:1.10.8.60 328 433 8.2E-39 T 14-10-2018 IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 SUPERFAMILY SSF52540 4 432 7.77E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09100 e8b03289e0d7a86ff66fca4a4dc358db 436 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 328 398 6.4E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 41 285 1.4E-80 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 93 282 1.3E-54 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 SUPERFAMILY SSF82866 77 293 3.01E-41 T 14-10-2018 IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 13 296 27.222 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 Gene3D G3DSA:1.20.1640.10 116 302 2.1E-14 T 14-10-2018 IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 6.8E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 6.8E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 PRINTS PR01755 Bacterial translocase SecF protein signature 40 55 6.8E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 6.8E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 Pfam PF02355 Protein export membrane protein 110 292 3.3E-66 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IM40_07595 0a94c942d13466faaa2b13b252f6fe0a 305 Pfam PF07549 SecD/SecF GG Motif 35 60 8.8E-8 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IM40_06870 004dd65d10ff0c1352d0db51981b222a 274 Pfam PF02517 CAAX protease self-immunity 128 233 7.8E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 Gene3D G3DSA:3.30.930.10 8 345 1.3E-117 T 14-10-2018 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 Pfam PF01409 tRNA synthetases class II core domain (F) 91 342 3.1E-101 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 87 8.4E-23 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 SUPERFAMILY SSF55681 91 344 9.09E-75 T 14-10-2018 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 343 46.179 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 342 2.0E-103 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 IM40_04990 c0124a5a8b5b15cb930ab3619943160f 357 SUPERFAMILY SSF46589 12 99 4.55E-21 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 IM40_07260 0d06bbf4556b8e22a056e0e3df33befb 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 20.487 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 IM40_07260 0d06bbf4556b8e22a056e0e3df33befb 121 Gene3D G3DSA:1.20.58.1610 2 121 4.4E-45 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07260 0d06bbf4556b8e22a056e0e3df33befb 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 120 8.9E-40 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_11250 5a1521b868dc6fc2a63915c6cb244251 229 Gene3D G3DSA:1.20.910.10 13 222 2.6E-8 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_11250 5a1521b868dc6fc2a63915c6cb244251 229 SUPERFAMILY SSF48613 14 225 1.21E-6 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 1.3E-98 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 5.5E-5 T 14-10-2018 IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.9E-67 T 14-10-2018 IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.1E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 SUPERFAMILY SSF51735 5 244 1.19E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 Gene3D G3DSA:3.40.50.720 1 245 1.0E-85 T 14-10-2018 IM40_01150 5f17a693acaa897321eb75e46273e7c7 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Pfam PF02080 TrkA-C domain 157 227 1.4E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Pfam PF02080 TrkA-C domain 391 451 1.3E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Pfam PF02254 TrkA-N domain 3 126 3.6E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Pfam PF02254 TrkA-N domain 237 354 5.1E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Gene3D G3DSA:3.30.70.1450 142 230 2.1E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Gene3D G3DSA:3.40.50.720 2 140 1.6E-43 T 14-10-2018 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 SUPERFAMILY SSF51735 1 153 2.36E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Gene3D G3DSA:3.40.50.720 235 370 2.1E-33 T 14-10-2018 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 SUPERFAMILY SSF116726 365 451 8.5E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 Gene3D G3DSA:3.30.70.1450 371 458 8.0E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 SUPERFAMILY SSF116726 149 229 2.62E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 IM40_05955 c868441ca8ff9a7920b2f0d12975ed0a 458 SUPERFAMILY SSF51735 235 379 4.2E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_09185 fd8c239b206208899bf360ef72e99a88 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 81 94 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09185 fd8c239b206208899bf360ef72e99a88 124 PIRSF PIRSF000178 1 124 1.5E-40 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09185 fd8c239b206208899bf360ef72e99a88 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 5.3E-36 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09185 fd8c239b206208899bf360ef72e99a88 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 119 8.8E-31 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09185 fd8c239b206208899bf360ef72e99a88 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09185 fd8c239b206208899bf360ef72e99a88 124 Gene3D G3DSA:1.20.1300.10 1 123 4.6E-38 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_09185 fd8c239b206208899bf360ef72e99a88 124 SUPERFAMILY SSF81343 2 123 1.19E-32 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IM40_06755 bdc13c0eb6b6f809098ab385811b9a64 188 SUPERFAMILY SSF52058 99 183 6.12E-11 T 14-10-2018 IM40_06755 bdc13c0eb6b6f809098ab385811b9a64 188 Gene3D G3DSA:3.80.10.10 30 183 4.3E-11 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_04745 9fcee71dfa16091779c7b4dfc098d8f0 438 Gene3D G3DSA:1.20.1250.20 37 225 5.1E-20 T 14-10-2018 IM40_04745 9fcee71dfa16091779c7b4dfc098d8f0 438 Gene3D G3DSA:1.20.1250.20 251 437 8.4E-20 T 14-10-2018 IM40_04745 9fcee71dfa16091779c7b4dfc098d8f0 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 349 374 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IM40_04745 9fcee71dfa16091779c7b4dfc098d8f0 438 SUPERFAMILY SSF103473 37 434 7.06E-56 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_04745 9fcee71dfa16091779c7b4dfc098d8f0 438 Pfam PF07690 Major Facilitator Superfamily 47 389 1.0E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 SUPERFAMILY SSF52540 272 520 2.08E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 SUPERFAMILY SSF52540 5 252 1.22E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 SMART SM00382 30 230 6.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 SMART SM00382 306 498 2.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 500 526 0.0022 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 264 2.3E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 Gene3D G3DSA:3.40.50.300 4 273 9.2E-81 T 14-10-2018 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 Gene3D G3DSA:3.40.50.300 274 527 3.5E-82 T 14-10-2018 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 Pfam PF00005 ABC transporter 297 449 2.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_01140 5385dbab311a33f21c4c6d63c4016cd7 527 Pfam PF00005 ABC transporter 21 180 7.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 17 54 1.3E-13 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 255 304 2.2E-13 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Gene3D G3DSA:2.40.30.10 734 831 6.1E-36 T 14-10-2018 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 SUPERFAMILY SSF52540 324 503 1.0E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Gene3D G3DSA:3.40.50.10050 626 733 3.1E-36 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 6 830 16.893 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Gene3D G3DSA:3.40.50.300 327 502 6.0E-70 T 14-10-2018 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 SUPERFAMILY SSF52156 612 739 2.62E-34 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 SUPERFAMILY SSF50447 734 829 9.03E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 249 832 9.0E-241 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 SUPERFAMILY SSF50447 504 587 2.7E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Pfam PF00009 Elongation factor Tu GTP binding domain 334 492 6.6E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Pfam PF11987 Translation-initiation factor 2 618 722 6.5E-36 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 333 487 5.1E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 Gene3D G3DSA:2.40.30.10 503 621 1.9E-39 T 14-10-2018 IM40_05450 660cb2b40fa2d07fe721dbd5d4178e5b 833 ProSitePatterns PS01176 Initiation factor 2 signature. 783 805 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SUPERFAMILY SSF48452 970 1092 1.6E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Gene3D G3DSA:1.25.40.10 743 871 2.2E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Gene3D G3DSA:1.25.40.10 964 1112 7.5E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Gene3D G3DSA:3.40.50.300 338 513 7.5E-20 T 14-10-2018 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 ProSitePatterns PS00622 LuxR-type HTH domain signature. 41 68 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Gene3D G3DSA:1.10.10.10 16 86 2.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Gene3D G3DSA:1.25.40.10 872 963 6.6E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 795 828 0.53 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 755 788 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 1006 1039 8.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 964 997 7.1E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 922 955 0.47 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 880 913 0.0039 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 837 870 2.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00028 1059 1092 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SUPERFAMILY SSF48452 759 913 2.47E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SUPERFAMILY SSF46894 14 83 6.8E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SUPERFAMILY SSF48452 879 997 2.09E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Pfam PF00931 NB-ARC domain 367 599 6.7E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SMART SM00421 24 81 5.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Pfam PF13176 Tetratricopeptide repeat 761 789 0.012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 SUPERFAMILY SSF52540 351 623 5.54E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Pfam PF13424 Tetratricopeptide repeat 921 996 2.6E-15 T 14-10-2018 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Pfam PF13424 Tetratricopeptide repeat 795 867 2.5E-17 T 14-10-2018 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 27 41 5.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 41 57 5.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 57 69 5.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Pfam PF13374 Tetratricopeptide repeat 880 916 7.9E-7 T 14-10-2018 IM40_09675 536d7dab9102d71023cb2ee7ab2ea475 1114 Pfam PF00196 Bacterial regulatory proteins, luxR family 27 70 7.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 Gene3D G3DSA:3.40.640.10 36 287 4.5E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 SUPERFAMILY SSF53383 6 418 8.86E-178 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 Pfam PF00464 Serine hydroxymethyltransferase 10 384 5.0E-175 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 PIRSF PIRSF000412 2 419 1.2E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 Gene3D G3DSA:3.90.1150.10 10 392 4.5E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IM40_03325 bb1a119d60854b8570ddf667c8ecb818 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 418 52.756 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IM40_06135 1391c114c86d2a64802ec1901b2eb28a 646 SUPERFAMILY SSF48435 35 439 6.28E-47 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 IM40_06135 1391c114c86d2a64802ec1901b2eb28a 646 Pfam PF01464 Transglycosylase SLT domain 501 602 4.1E-25 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 IM40_06135 1391c114c86d2a64802ec1901b2eb28a 646 Gene3D G3DSA:1.10.530.10 481 646 4.4E-44 T 14-10-2018 IM40_06135 1391c114c86d2a64802ec1901b2eb28a 646 SUPERFAMILY SSF53955 500 642 1.09E-40 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily IM40_06135 1391c114c86d2a64802ec1901b2eb28a 646 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 509 537 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 IM40_05035 507ebf12ca261c3d76c6b657272349a3 181 Gene3D G3DSA:1.10.357.10 1 175 2.2E-41 T 14-10-2018 IM40_05035 507ebf12ca261c3d76c6b657272349a3 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 50 7.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IM40_05035 507ebf12ca261c3d76c6b657272349a3 181 SUPERFAMILY SSF46689 2 65 1.02E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Pfam PF01926 50S ribosome-binding GTPase 6 122 1.1E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Pfam PF01926 50S ribosome-binding GTPase 183 300 1.4E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 SMART SM00382 3 164 9.8 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 SMART SM00382 179 294 0.04 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Gene3D G3DSA:3.30.300.20 356 439 8.1E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 6 435 7.7E-153 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 SUPERFAMILY SSF52540 140 442 1.1E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 436 3.1E-29 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Hamap MF_00195 GTPase Der [der]. 4 439 34.15 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 2.5E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 93 2.5E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Gene3D G3DSA:3.40.50.300 176 352 8.1E-47 T 14-10-2018 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 2.8E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 345 4.7E-29 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 SUPERFAMILY SSF52540 5 169 2.02E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 PIRSF PIRSF006485 3 444 1.4E-151 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 IM40_04845 97e68c095164b2e804ac3b8a8cbccd3e 447 Gene3D G3DSA:3.40.50.300 1 175 1.1E-40 T 14-10-2018 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 SMART SM00729 55 262 2.8E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 SUPERFAMILY SSF102114 23 283 5.76E-64 T 14-10-2018 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 TIGRFAM TIGR00510 lipA: lipoyl synthase 4 290 4.0E-114 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 Gene3D G3DSA:3.20.20.70 51 262 3.5E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 Hamap MF_00206 Lipoyl synthase [lipA]. 1 293 152.667 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 PIRSF PIRSF005963 1 303 7.1E-137 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IM40_06305 c9a864575cfba5cd433598d3ee9591dc 303 Pfam PF04055 Radical SAM superfamily 62 221 1.6E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 451 632 6.7E-31 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 SUPERFAMILY SSF55073 448 635 1.41E-54 T 14-10-2018 IPR029787 Nucleotide cyclase IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 SUPERFAMILY SSF103190 146 246 6.54E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 Gene3D G3DSA:3.30.70.1230 442 645 2.5E-64 T 14-10-2018 IPR029787 Nucleotide cyclase IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 SMART SM00044 418 618 5.2E-8 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 Pfam PF02743 Cache domain 68 338 9.2E-26 T 14-10-2018 IPR033479 Double Cache domain 1 IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 Gene3D G3DSA:3.30.450.20 206 342 1.2E-19 T 14-10-2018 IM40_04345 2b515513d65519ba1b4db0603b9c7089 717 Gene3D G3DSA:1.20.1480.50 343 433 6.1E-7 T 14-10-2018 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 SUPERFAMILY SSF53150 113 282 1.27E-33 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 SUPERFAMILY SSF52540 572 807 2.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 862 2.9E-271 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 SUPERFAMILY SSF55271 1 111 6.02E-38 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Gene3D G3DSA:3.30.420.110 123 263 4.9E-26 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 857 23.057 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Pfam PF00488 MutS domain V 619 806 1.6E-85 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 SMART SM00533 286 596 1.5E-81 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Pfam PF01624 MutS domain I 1 115 8.6E-40 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Pfam PF05188 MutS domain II 124 252 1.1E-19 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 SUPERFAMILY SSF48334 270 568 2.35E-75 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Gene3D G3DSA:3.40.1170.10 1 117 4.0E-46 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 SMART SM00534 616 803 8.0E-117 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Pfam PF05192 MutS domain III 272 564 6.0E-36 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Pfam PF05190 MutS family domain IV 433 523 6.8E-22 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 697 713 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Gene3D G3DSA:1.10.1420.10 269 564 5.1E-85 T 14-10-2018 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Gene3D G3DSA:1.10.1420.10 390 508 5.1E-85 T 14-10-2018 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 Gene3D G3DSA:3.40.50.300 575 863 4.6E-97 T 14-10-2018 IM40_07050 e32d1bb5d335a0dba632160ed80c31cc 871 PIRSF PIRSF037677 1 824 6.0E-168 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 IM40_00755 41d669a9168f297584f35f5feac9735d 151 Gene3D G3DSA:2.60.40.1890 33 147 6.8E-35 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily IM40_00755 41d669a9168f297584f35f5feac9735d 151 Pfam PF04314 Copper chaperone PCu(A)C 30 136 1.1E-35 T 14-10-2018 IPR007410 Copper chaperone PCuAC IM40_00755 41d669a9168f297584f35f5feac9735d 151 SUPERFAMILY SSF110087 5 143 1.12E-40 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Pfam PF03979 Sigma-70 factor, region 1.1 26 102 2.5E-20 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Gene3D G3DSA:1.10.10.10 489 564 1.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Gene3D G3DSA:1.10.220.120 23 84 7.3E-20 T 14-10-2018 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Pfam PF00140 Sigma-70 factor, region 1.2 116 147 3.4E-14 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 SUPERFAMILY SSF88659 546 648 5.42E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Gene3D G3DSA:1.10.601.10 131 485 1.4E-115 T 14-10-2018 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 PRINTS PR00046 Major sigma-70 factor signature 624 635 5.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 PRINTS PR00046 Major sigma-70 factor signature 440 453 5.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 PRINTS PR00046 Major sigma-70 factor signature 464 472 5.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 PRINTS PR00046 Major sigma-70 factor signature 609 624 5.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 PRINTS PR00046 Major sigma-70 factor signature 588 600 5.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 SUPERFAMILY SSF88946 133 483 2.35E-93 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Pfam PF04539 Sigma-70 region 3 495 571 2.1E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Pfam PF04545 Sigma-70, region 4 584 637 2.3E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 609 635 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 13 649 43.317 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Pfam PF04542 Sigma-70 region 2 416 485 1.9E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Gene3D G3DSA:1.10.10.10 566 650 2.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 440 453 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 Pfam PF04546 Sigma-70, non-essential region 158 384 2.8E-41 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 412 648 3.4E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 412 637 1.5E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 IM40_00765 c6519bdb21259414a98f8c648882bb0c 650 SUPERFAMILY SSF88659 489 562 3.88E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IM40_05705 8ca3947d2b9264c3066a8ec99744a8c2 135 Gene3D G3DSA:3.90.1010.10 1 131 2.3E-57 T 14-10-2018 IM40_05705 8ca3947d2b9264c3066a8ec99744a8c2 135 Pfam PF01592 NifU-like N terminal domain 2 125 6.3E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 IM40_05705 8ca3947d2b9264c3066a8ec99744a8c2 135 SUPERFAMILY SSF82649 1 126 1.18E-48 T 14-10-2018 IM40_05705 8ca3947d2b9264c3066a8ec99744a8c2 135 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.7E-67 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:3.40.50.12780 6 434 6.3E-125 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Pfam PF00550 Phosphopantetheine attachment site 1668 1732 4.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Pfam PF00550 Phosphopantetheine attachment site 585 651 6.6E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 SUPERFAMILY SSF56801 6 544 4.97E-104 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 SUPERFAMILY SSF52777 858 1103 1.11E-51 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Pfam PF00668 Condensation domain 671 1115 8.5E-94 T 14-10-2018 IPR001242 Condensation domain IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 SUPERFAMILY SSF47336 578 683 7.2E-7 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:3.40.50.12780 1125 1544 1.7E-126 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:3.30.559.30 855 1098 7.5E-113 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 SUPERFAMILY SSF56801 1100 1680 3.27E-141 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 SUPERFAMILY SSF52777 676 851 1.33E-33 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:3.30.300.30 436 559 1.6E-38 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1158 1574 9.8E-129 T 14-10-2018 IPR010071 Amino acid adenylation domain IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:3.30.559.10 673 1045 7.5E-113 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:1.10.1200.10 1657 1740 4.5E-22 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Gene3D G3DSA:3.30.300.30 1545 1656 3.1E-29 T 14-10-2018 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Pfam PF00501 AMP-binding enzyme 13 441 2.6E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Pfam PF00501 AMP-binding enzyme 1137 1550 2.6E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1279 1290 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 Pfam PF13193 AMP-binding enzyme C-terminal domain 1558 1639 2.2E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02505 ae3db919b507c0ea35ff7de92a451652 1750 SUPERFAMILY SSF47336 1660 1732 7.59E-17 T 14-10-2018 IPR036736 ACP-like superfamily IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 SUPERFAMILY SSF55957 361 445 7.15E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Gene3D G3DSA:3.40.120.10 176 365 1.1E-64 T 14-10-2018 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 SUPERFAMILY SSF53738 260 366 2.79E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Gene3D G3DSA:3.30.310.50 373 448 5.7E-18 T 14-10-2018 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Gene3D G3DSA:3.40.120.10 259 342 1.1E-64 T 14-10-2018 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 5.4E-20 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.6E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 1.6E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 1.6E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 367 4.4E-33 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 SUPERFAMILY SSF53738 158 258 2.39E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 1.6E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 386 437 3.1E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 443 1.6E-177 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 SUPERFAMILY SSF53738 2 183 3.73E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 44.458 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IM40_01855 a43aa0451c7f7b4d0b76b12b3945bba6 453 Gene3D G3DSA:3.40.120.10 2 145 2.2E-46 T 14-10-2018 IM40_05560 fc2a36cd46e59aeeeea5b404e080ad9d 136 Pfam PF01878 EVE domain 3 132 9.9E-43 T 14-10-2018 IPR002740 EVE domain IM40_05560 fc2a36cd46e59aeeeea5b404e080ad9d 136 Gene3D G3DSA:3.10.590.10 1 136 1.9E-47 T 14-10-2018 IM40_05560 fc2a36cd46e59aeeeea5b404e080ad9d 136 SUPERFAMILY SSF88697 1 134 4.72E-47 T 14-10-2018 IPR015947 PUA-like superfamily IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 Pfam PF00293 NUDIX domain 11 148 1.1E-28 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 PRINTS PR00502 NUDIX hydrolase family signature 53 68 7.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 PRINTS PR00502 NUDIX hydrolase family signature 39 53 7.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 Gene3D G3DSA:3.90.79.10 3 158 8.5E-43 T 14-10-2018 IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 5 159 33.907 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH IM40_03395 6c15d238df3eb403ac85b93b673ebca6 167 SUPERFAMILY SSF55811 9 155 2.44E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IM40_05660 1b695f290930ce1340f1a7e395f37a5f 291 PIRSF PIRSF005651 1 291 2.4E-88 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 IM40_05660 1b695f290930ce1340f1a7e395f37a5f 291 SUPERFAMILY SSF117892 54 190 4.84E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily IM40_05660 1b695f290930ce1340f1a7e395f37a5f 291 TIGRFAM TIGR01932 hflC: HflC protein 138 284 3.9E-43 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 IM40_05660 1b695f290930ce1340f1a7e395f37a5f 291 SMART SM00244 22 184 5.0E-25 T 14-10-2018 IPR001107 Band 7 domain IM40_05660 1b695f290930ce1340f1a7e395f37a5f 291 Gene3D G3DSA:3.30.479.30 51 186 1.4E-19 T 14-10-2018 IM40_05660 1b695f290930ce1340f1a7e395f37a5f 291 Pfam PF01145 SPFH domain / Band 7 family 29 200 8.7E-23 T 14-10-2018 IPR001107 Band 7 domain IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 Gene3D G3DSA:1.25.40.20 659 817 1.6E-22 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 Gene3D G3DSA:1.25.40.20 842 930 3.2E-11 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 795 828 310.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 900 930 0.029 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 1000 1031 160.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 726 758 29.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 967 998 0.003 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 762 793 2.5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 934 963 1.7E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SMART SM00248 858 895 2.9 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 Pfam PF12796 Ankyrin repeats (3 copies) 732 816 1.4E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 Pfam PF12796 Ankyrin repeats (3 copies) 917 1000 3.7E-14 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 SUPERFAMILY SSF48403 712 1031 4.4E-45 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IM40_02375 cdc039f1c4d35a426df36e84d7cf3c5f 1061 Gene3D G3DSA:1.25.40.20 931 1061 6.4E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IM40_04810 41605034875e69e05283062219586b4d 142 Pfam PF00583 Acetyltransferase (GNAT) family 13 113 1.6E-11 T 14-10-2018 IPR000182 GNAT domain IM40_04810 41605034875e69e05283062219586b4d 142 Gene3D G3DSA:3.40.630.30 2 142 4.0E-28 T 14-10-2018 IM40_04810 41605034875e69e05283062219586b4d 142 SUPERFAMILY SSF55729 9 128 1.83E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_01475 95b6d429ac06afa34e54854499543693 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 320 4.8E-50 T 14-10-2018 IPR016040 NAD(P)-binding domain IM40_01475 95b6d429ac06afa34e54854499543693 332 PRINTS PR01713 Nucleotide sugar epimerase signature 35 51 1.3E-23 T 14-10-2018 IM40_01475 95b6d429ac06afa34e54854499543693 332 PRINTS PR01713 Nucleotide sugar epimerase signature 292 309 1.3E-23 T 14-10-2018 IM40_01475 95b6d429ac06afa34e54854499543693 332 PRINTS PR01713 Nucleotide sugar epimerase signature 224 239 1.3E-23 T 14-10-2018 IM40_01475 95b6d429ac06afa34e54854499543693 332 PRINTS PR01713 Nucleotide sugar epimerase signature 253 268 1.3E-23 T 14-10-2018 IM40_01475 95b6d429ac06afa34e54854499543693 332 Gene3D G3DSA:3.40.50.720 10 313 4.6E-93 T 14-10-2018 IM40_01475 95b6d429ac06afa34e54854499543693 332 Gene3D G3DSA:3.90.25.10 188 325 4.6E-93 T 14-10-2018 IM40_01475 95b6d429ac06afa34e54854499543693 332 SUPERFAMILY SSF51735 7 330 4.03E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 41 198 2.3E-44 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 84 136 2.0E-14 T 14-10-2018 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 PIRSF PIRSF016262 7 215 1.2E-53 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 Hamap MF_00013 Octanoyltransferase [lipB]. 12 214 32.009 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 79 94 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 Gene3D G3DSA:3.30.930.10 9 214 6.9E-61 T 14-10-2018 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 SUPERFAMILY SSF55681 14 215 6.96E-59 T 14-10-2018 IM40_01350 67f2b4e206490cf0695ec586b82e0338 215 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 171 1.6E-6 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 SUPERFAMILY SSF102114 109 355 6.15E-54 T 14-10-2018 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 Gene3D G3DSA:3.80.30.20 130 363 9.4E-72 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 Pfam PF00919 Uncharacterized protein family UPF0004 8 92 1.4E-16 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 SMART SM00729 133 351 2.6E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 Gene3D G3DSA:3.40.50.12160 7 122 9.9E-17 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 137 157 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 9 393 4.1E-133 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 Pfam PF04055 Radical SAM superfamily 137 308 4.6E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IM40_04115 39537bcaec693d5c2c9a65088da157fd 421 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 8 416 6.8E-108 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 IM40_10020 a38150752fd01702c825f6991e57916c 358 Gene3D G3DSA:3.40.109.10 108 340 3.2E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_10020 a38150752fd01702c825f6991e57916c 358 SUPERFAMILY SSF55469 145 346 3.3E-16 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_10020 a38150752fd01702c825f6991e57916c 358 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 164 338 2.4E-29 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain IM40_10020 a38150752fd01702c825f6991e57916c 358 Pfam PF00881 Nitroreductase family 150 340 2.2E-14 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 SUPERFAMILY SSF46767 77 158 1.57E-32 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 6.9E-8 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 Gene3D G3DSA:1.10.10.10 77 162 1.4E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 157 4.6E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 SUPERFAMILY SSF53155 3 83 2.35E-17 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 7.1E-38 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 Gene3D G3DSA:3.30.160.70 2 74 6.0E-16 T 14-10-2018 IM40_03390 d81c8777da1e775f3cf1906103acd62d 165 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 43.836 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 IM40_08950 5a4645028c68bd3955e2f3fb457e9c30 237 SUPERFAMILY SSF52317 3 235 5.4E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_08950 5a4645028c68bd3955e2f3fb457e9c30 237 Gene3D G3DSA:3.40.50.880 1 237 3.6E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_08950 5a4645028c68bd3955e2f3fb457e9c30 237 PRINTS PR00096 Glutamine amidotransferase superfamily signature 211 224 2.4E-5 T 14-10-2018 IM40_08950 5a4645028c68bd3955e2f3fb457e9c30 237 PRINTS PR00096 Glutamine amidotransferase superfamily signature 107 118 2.4E-5 T 14-10-2018 IM40_08950 5a4645028c68bd3955e2f3fb457e9c30 237 Pfam PF07722 Peptidase C26 4 217 4.9E-63 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 IM40_03425 887142940164a46c6a8017d545a37036 188 PIRSF PIRSF000239 7 188 3.4E-48 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IM40_03425 887142940164a46c6a8017d545a37036 188 Pfam PF00578 AhpC/TSA family 14 146 2.4E-31 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IM40_03425 887142940164a46c6a8017d545a37036 188 Gene3D G3DSA:3.40.30.10 6 188 8.4E-57 T 14-10-2018 IM40_03425 887142940164a46c6a8017d545a37036 188 SUPERFAMILY SSF52833 11 186 3.81E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_09155 03d30decef8751f2563f23d9c377a9ca 117 SUPERFAMILY SSF52980 6 112 6.57E-22 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IM40_09155 03d30decef8751f2563f23d9c377a9ca 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 112 18.037 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 IM40_09155 03d30decef8751f2563f23d9c377a9ca 117 Gene3D G3DSA:3.40.1350.10 9 116 6.5E-27 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 IM40_09155 03d30decef8751f2563f23d9c377a9ca 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 99 7.0E-20 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 Gene3D G3DSA:3.30.63.10 43 102 3.4E-62 T 14-10-2018 IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 SMART SM00072 11 194 2.1E-55 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 Hamap MF_00328 Guanylate kinase [gmk]. 10 194 34.479 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 Pfam PF00625 Guanylate kinase 14 192 1.2E-46 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 SUPERFAMILY SSF52540 10 198 4.0E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 Gene3D G3DSA:3.40.50.300 16 190 3.4E-62 T 14-10-2018 IM40_00325 a9faac01dcd9e8fc85faf02948f7521e 214 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 13 191 4.1E-69 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 Pfam PF00108 Thiolase, N-terminal domain 6 263 2.9E-81 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 PIRSF PIRSF000429 1 395 1.8E-114 T 14-10-2018 IPR002155 Thiolase GO:0016747 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 SUPERFAMILY SSF53901 273 393 6.64E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 Gene3D G3DSA:3.40.47.10 128 391 7.4E-138 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 SUPERFAMILY SSF53901 6 271 1.01E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 Pfam PF02803 Thiolase, C-terminal domain 272 393 2.8E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 Gene3D G3DSA:3.40.47.10 8 277 7.4E-138 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 2.5E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 IM40_05760 98ab491931dea59686242ce0e27cdc1b 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IM40_03270 4fa930b0068fe1c86f71ae7df1a5ffea 1618 SUPERFAMILY SSF53223 757 942 1.44E-20 T 14-10-2018 IM40_03270 4fa930b0068fe1c86f71ae7df1a5ffea 1618 PIRSF PIRSF036761 1 1615 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 IM40_03270 4fa930b0068fe1c86f71ae7df1a5ffea 1618 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 91 1608 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 IM40_03270 4fa930b0068fe1c86f71ae7df1a5ffea 1618 SUPERFAMILY SSF51735 947 1284 1.35E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_04630 92ec5b82220a5b51541ce538346d47ce 347 Pfam PF13413 Helix-turn-helix domain 44 102 2.2E-17 T 14-10-2018 IM40_04630 92ec5b82220a5b51541ce538346d47ce 347 Pfam PF13464 Domain of unknown function (DUF4115) 263 331 1.1E-13 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 IM40_04630 92ec5b82220a5b51541ce538346d47ce 347 Gene3D G3DSA:1.10.260.40 32 132 1.1E-21 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Gene3D G3DSA:3.40.50.670 410 601 3.3E-69 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 SUPERFAMILY SSF56719 406 802 2.88E-82 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 SUPERFAMILY SSF55874 15 221 3.67E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 811 98.151 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 232 254 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 324 340 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 482 491 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 780 796 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 15 25 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 386 406 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 372 386 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 206 219 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 764 776 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR01159 DNA gyrase subunit B signature 191 206 2.1E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 183 5.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 743 759 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 45 60 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 499 515 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 80 93 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 432 446 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 123 137 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 517 534 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 280 293 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 PRINTS PR00418 DNA topoisomerase II family signature 537 549 2.1E-67 T 14-10-2018 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Gene3D G3DSA:3.30.565.10 12 232 6.7E-88 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 SUPERFAMILY SSF54211 233 403 2.09E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 739 800 1.4E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 SMART SM00433 45 804 6.2E-253 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Gene3D G3DSA:3.40.50.670 695 810 3.8E-24 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Gene3D G3DSA:3.30.230.10 233 404 1.4E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 SMART SM00387 41 186 3.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 810 6.1E-298 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Pfam PF00204 DNA gyrase B 233 402 4.9E-57 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00020 e63a340bc98f132e1a8ebf6941579956 811 Pfam PF01751 Toprim domain 431 543 1.2E-15 T 14-10-2018 IPR006171 TOPRIM domain IM40_00960 22dca0344dd030f638d85c2727747041 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 Gene3D G3DSA:1.10.287.180 1 75 7.6E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.214 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 IM40_00960 22dca0344dd030f638d85c2727747041 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.2E-58 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 Gene3D G3DSA:3.10.50.30 76 157 2.3E-28 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 SUPERFAMILY SSF46557 3 78 2.09E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 9.8E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 PIRSF PIRSF006092 1 157 3.4E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 IM40_00960 22dca0344dd030f638d85c2727747041 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.7E-30 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 IM40_00960 22dca0344dd030f638d85c2727747041 157 SUPERFAMILY SSF54534 81 156 6.41E-23 T 14-10-2018 IM40_04795 c9c57d5c55dd8a73cc81677eed7588e8 319 SUPERFAMILY SSF52540 114 293 6.74E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04795 c9c57d5c55dd8a73cc81677eed7588e8 319 Pfam PF02562 PhoH-like protein 115 318 3.3E-92 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 IM40_04795 c9c57d5c55dd8a73cc81677eed7588e8 319 Gene3D G3DSA:3.40.50.300 112 318 4.7E-74 T 14-10-2018 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Gene3D G3DSA:3.40.50.10490 249 608 1.1E-136 T 14-10-2018 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Pfam PF13522 Glutamine amidotransferase domain 67 194 4.5E-20 T 14-10-2018 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 SUPERFAMILY SSF56235 2 235 2.57E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Pfam PF01380 SIS domain 462 591 8.4E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Pfam PF01380 SIS domain 289 416 7.2E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.709 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Gene3D G3DSA:3.60.20.10 2 242 1.0E-74 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 Gene3D G3DSA:3.40.50.10490 446 594 1.1E-136 T 14-10-2018 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.1E-239 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 IM40_04905 0079a782f28d97525ce84898d5f0f39f 609 SUPERFAMILY SSF53697 246 609 2.23E-102 T 14-10-2018 IM40_00840 89b690c2422d6fdc9f497a799272ab9e 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 7 327 63.765 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 IM40_00840 89b690c2422d6fdc9f497a799272ab9e 327 Gene3D G3DSA:3.40.47.10 5 327 5.5E-117 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_00840 89b690c2422d6fdc9f497a799272ab9e 327 SUPERFAMILY SSF53901 11 327 3.7E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_00840 89b690c2422d6fdc9f497a799272ab9e 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 9 327 2.8E-111 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 IM40_00840 89b690c2422d6fdc9f497a799272ab9e 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 112 194 6.4E-26 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 IM40_00840 89b690c2422d6fdc9f497a799272ab9e 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 327 1.6E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 SUPERFAMILY SSF69065 2 155 1.71E-47 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 SMART SM00358 154 221 1.3E-18 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 Gene3D G3DSA:1.10.1520.10 3 146 9.9E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 SMART SM00535 19 149 1.9E-48 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 217 29.403 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 Pfam PF00035 Double-stranded RNA binding motif 154 220 2.1E-12 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 Gene3D G3DSA:3.30.160.20 152 222 7.1E-19 T 14-10-2018 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 Pfam PF14622 Ribonuclease-III-like 17 139 2.3E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 SUPERFAMILY SSF54768 110 220 1.89E-23 T 14-10-2018 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 IM40_01745 9096f755a84070035b9d0796c8e1b2bc 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 219 3.2E-72 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 IM40_09065 543dd5a4bab869eb2d8c20ceff760f0a 213 SUPERFAMILY SSF54427 17 211 6.57E-41 T 14-10-2018 IPR032710 NTF2-like domain superfamily IM40_09065 543dd5a4bab869eb2d8c20ceff760f0a 213 Pfam PF04280 Tim44-like domain 68 213 5.3E-41 T 14-10-2018 IPR007379 Tim44-like domain IM40_09065 543dd5a4bab869eb2d8c20ceff760f0a 213 Gene3D G3DSA:3.10.450.240 65 213 4.3E-37 T 14-10-2018 IM40_09065 543dd5a4bab869eb2d8c20ceff760f0a 213 SMART SM00978 67 213 7.7E-40 T 14-10-2018 IPR007379 Tim44-like domain IM40_11455 b337dec647d503861fcce7a468b7b646 169 Pfam PF04352 ProQ/FINO family 58 162 2.1E-27 T 14-10-2018 IPR016103 ProQ/FinO domain IM40_11455 b337dec647d503861fcce7a468b7b646 169 Gene3D G3DSA:1.10.1710.10 16 166 3.3E-26 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_11455 b337dec647d503861fcce7a468b7b646 169 SMART SM00945 54 167 1.9E-26 T 14-10-2018 IPR016103 ProQ/FinO domain IM40_11455 b337dec647d503861fcce7a468b7b646 169 SUPERFAMILY SSF48657 24 164 5.62E-30 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_05050 eefff0faa3e9d73fcf86ec213461bbad 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 249 1.3E-38 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IM40_05050 eefff0faa3e9d73fcf86ec213461bbad 328 Gene3D G3DSA:3.90.25.10 174 304 7.3E-119 T 14-10-2018 IM40_05050 eefff0faa3e9d73fcf86ec213461bbad 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 321 2.1E-118 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 IM40_05050 eefff0faa3e9d73fcf86ec213461bbad 328 SUPERFAMILY SSF51735 3 321 6.88E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05050 eefff0faa3e9d73fcf86ec213461bbad 328 Gene3D G3DSA:3.40.50.720 3 317 7.3E-119 T 14-10-2018 IM40_05050 eefff0faa3e9d73fcf86ec213461bbad 328 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 323 46.741 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 IM40_09005 090a56f581b73901ad1f1b309b97e888 296 Gene3D G3DSA:3.90.1530.30 46 111 1.7E-26 T 14-10-2018 IM40_09005 090a56f581b73901ad1f1b309b97e888 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 201 7.0E-59 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 IM40_09005 090a56f581b73901ad1f1b309b97e888 296 Gene3D G3DSA:1.10.10.2830 112 223 3.2E-38 T 14-10-2018 IM40_09005 090a56f581b73901ad1f1b309b97e888 296 SMART SM00470 33 125 3.6E-32 T 14-10-2018 IPR003115 ParB/Sulfiredoxin IM40_09005 090a56f581b73901ad1f1b309b97e888 296 SUPERFAMILY SSF110849 31 183 4.29E-33 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily IM40_09005 090a56f581b73901ad1f1b309b97e888 296 Pfam PF02195 ParB-like nuclease domain 34 125 2.5E-24 T 14-10-2018 IPR003115 ParB/Sulfiredoxin IM40_05010 abb5886934043c6c4fef433a855cb6b5 173 SUPERFAMILY SSF55729 4 171 2.03E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_05010 abb5886934043c6c4fef433a855cb6b5 173 Pfam PF00583 Acetyltransferase (GNAT) family 48 145 7.7E-19 T 14-10-2018 IPR000182 GNAT domain IM40_05010 abb5886934043c6c4fef433a855cb6b5 173 Gene3D G3DSA:3.40.630.30 2 173 1.7E-41 T 14-10-2018 IM40_09545 8762259b2063b0a6d7b5adea3be66cf6 114 Gene3D G3DSA:3.10.450.40 2 108 6.1E-22 T 14-10-2018 IM40_09545 8762259b2063b0a6d7b5adea3be66cf6 114 Pfam PF04965 Gene 25-like lysozyme 15 96 1.7E-18 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD IM40_09545 8762259b2063b0a6d7b5adea3be66cf6 114 SUPERFAMILY SSF160719 9 111 2.09E-29 T 14-10-2018 IM40_00600 1049a79e1a82383e9f386538880b7518 191 Gene3D G3DSA:2.60.370.10 49 182 1.7E-54 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00600 1049a79e1a82383e9f386538880b7518 191 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 178 35.728 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00600 1049a79e1a82383e9f386538880b7518 191 PIRSF PIRSF005413 1 188 6.2E-68 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00600 1049a79e1a82383e9f386538880b7518 191 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 27 171 1.0E-54 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00600 1049a79e1a82383e9f386538880b7518 191 SUPERFAMILY SSF110111 53 176 2.62E-48 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 388 41.388 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Pfam PF01556 DnaJ C terminal domain 138 351 1.5E-42 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Pfam PF00226 DnaJ domain 6 68 6.8E-28 T 14-10-2018 IPR001623 DnaJ domain IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 SMART SM00271 5 63 1.8E-31 T 14-10-2018 IPR001623 DnaJ domain IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 SUPERFAMILY SSF49493 276 362 1.22E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Gene3D G3DSA:2.60.260.20 134 266 7.1E-37 T 14-10-2018 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Gene3D G3DSA:1.10.287.110 2 127 1.7E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 14-10-2018 IPR018253 DnaJ domain, conserved site IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 367 3.5E-136 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 SUPERFAMILY SSF49493 132 278 3.4E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 SUPERFAMILY SSF57938 151 226 8.76E-21 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Pfam PF00684 DnaJ central domain 164 224 1.1E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 SUPERFAMILY SSF46565 2 106 3.4E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Gene3D G3DSA:2.60.260.20 271 382 8.5E-31 T 14-10-2018 IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 PRINTS PR00625 DnaJ domain signature 8 26 8.6E-32 T 14-10-2018 IPR001623 DnaJ domain IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 PRINTS PR00625 DnaJ domain signature 63 82 8.6E-32 T 14-10-2018 IPR001623 DnaJ domain IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 PRINTS PR00625 DnaJ domain signature 26 41 8.6E-32 T 14-10-2018 IPR001623 DnaJ domain IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 PRINTS PR00625 DnaJ domain signature 43 63 8.6E-32 T 14-10-2018 IPR001623 DnaJ domain IM40_00205 4c59b73435428a2e55c271a7161f5ca1 401 Gene3D G3DSA:2.10.230.10 164 224 7.1E-37 T 14-10-2018 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 Pfam PF01926 50S ribosome-binding GTPase 5 116 4.5E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 44.106 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 7.8E-153 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 SUPERFAMILY SSF52540 3 304 4.18E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 PIRSF PIRSF006641 1 366 9.5E-159 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 Gene3D G3DSA:3.10.20.30 49 364 3.7E-150 T 14-10-2018 IPR012675 Beta-grasp domain superfamily IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 Gene3D G3DSA:3.40.50.300 4 281 3.7E-150 T 14-10-2018 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 Gene3D G3DSA:1.10.150.300 114 201 3.7E-150 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.3E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.3E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 1.3E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 1.3E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 SUPERFAMILY SSF81271 282 363 3.71E-34 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IM40_05530 489ee619eb4e951a7ceaf2396298fa1c 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 1.7E-37 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 IM40_08630 558d014ef0d6bb23b1a9d3624ec53b8b 755 Pfam PF04453 Organic solvent tolerance protein 300 674 9.8E-50 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 IM40_08630 558d014ef0d6bb23b1a9d3624ec53b8b 755 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 737 15.133 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 PRINTS PR00162 Rieske 2Fe-2S subunit signature 148 160 9.2E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 9.2E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 PRINTS PR00162 Rieske 2Fe-2S subunit signature 160 172 9.2E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 17 51 1.0E-17 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 Gene3D G3DSA:1.20.5.510 16 51 4.4E-14 T 14-10-2018 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 20 188 4.5E-66 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 Gene3D G3DSA:2.102.10.10 52 187 4.7E-51 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 SUPERFAMILY SSF50022 42 184 7.46E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IM40_06790 a0153fac98f1cc6c96fd335a0b8f5ecd 188 Pfam PF00355 Rieske [2Fe-2S] domain 116 176 2.0E-12 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IM40_08725 8a5b771e8a75796d3c55684153cd8664 247 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 193 6.3E-25 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 IM40_08725 8a5b771e8a75796d3c55684153cd8664 247 SUPERFAMILY SSF57863 81 192 7.59E-11 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger IM40_08725 8a5b771e8a75796d3c55684153cd8664 247 Pfam PF11967 Recombination protein O N terminal 2 67 1.5E-8 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal IM40_08725 8a5b771e8a75796d3c55684153cd8664 247 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 130 235 6.0E-17 T 14-10-2018 IM40_08725 8a5b771e8a75796d3c55684153cd8664 247 Pfam PF02565 Recombination protein O C terminal 82 219 2.6E-18 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 IM40_08725 8a5b771e8a75796d3c55684153cd8664 247 Hamap MF_00201 DNA repair protein RecO [recO]. 1 237 14.029 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 IM40_01665 459515a84712e3b887535441ed2c2cc9 349 SUPERFAMILY SSF55729 71 133 4.58E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_05235 cfa743863f4110132651e0728a38fd33 266 Pfam PF01026 TatD related DNase 4 258 1.8E-81 T 14-10-2018 IPR001130 TatD family GO:0016788 IM40_05235 cfa743863f4110132651e0728a38fd33 266 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 194 210 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 IM40_05235 cfa743863f4110132651e0728a38fd33 266 PIRSF PIRSF005902 1 262 7.7E-88 T 14-10-2018 IPR001130 TatD family GO:0016788 IM40_05235 cfa743863f4110132651e0728a38fd33 266 SUPERFAMILY SSF51556 3 258 4.35E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase IM40_05235 cfa743863f4110132651e0728a38fd33 266 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 IM40_05235 cfa743863f4110132651e0728a38fd33 266 Gene3D G3DSA:3.20.20.140 1 262 2.7E-95 T 14-10-2018 IM40_05235 cfa743863f4110132651e0728a38fd33 266 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 258 2.9E-91 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 IM40_05600 ce5a2ed024a0ec0531be6b866efacde0 553 SUPERFAMILY SSF51735 398 531 9.65E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05600 ce5a2ed024a0ec0531be6b866efacde0 553 Gene3D G3DSA:3.40.50.720 398 553 1.2E-36 T 14-10-2018 IM40_05600 ce5a2ed024a0ec0531be6b866efacde0 553 Pfam PF00999 Sodium/hydrogen exchanger family 5 368 1.2E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 IM40_05600 ce5a2ed024a0ec0531be6b866efacde0 553 Pfam PF02254 TrkA-N domain 402 514 2.2E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IM40_05600 ce5a2ed024a0ec0531be6b866efacde0 553 Gene3D G3DSA:1.20.1530.20 1 378 3.6E-77 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 Gene3D G3DSA:1.10.579.10 290 473 1.3E-85 T 14-10-2018 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 SUPERFAMILY SSF52425 3 188 4.06E-55 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 321 333 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 PRINTS PR00147 DNA photolyase signature 341 359 8.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 PRINTS PR00147 DNA photolyase signature 321 337 8.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 PRINTS PR00147 DNA photolyase signature 142 158 8.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 PRINTS PR00147 DNA photolyase signature 380 394 8.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 Gene3D G3DSA:3.40.50.620 7 206 1.1E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 Pfam PF00875 DNA photolyase 7 160 1.2E-47 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 341 360 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 Gene3D G3DSA:1.25.40.80 131 286 1.1E-89 T 14-10-2018 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 SUPERFAMILY SSF48173 191 472 6.67E-114 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 IM40_01215 7cc0bb76abc4bdaf92a60b69df0b90e1 473 Pfam PF03441 FAD binding domain of DNA photolyase 272 471 2.2E-90 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 7.7E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 3.3E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 SUPERFAMILY SSF51905 2 308 1.71E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 Gene3D G3DSA:3.50.50.60 123 248 1.1E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.5E-36 T 14-10-2018 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.5E-36 T 14-10-2018 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.5E-36 T 14-10-2018 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.5E-36 T 14-10-2018 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-36 T 14-10-2018 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 309 3.3E-123 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 IM40_07765 89177bdf15f9f5085264025a76fbd1dd 312 Gene3D G3DSA:3.50.50.60 9 307 1.1E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09920 4bf521ce64bf4b8d8d5c3c1f840ff759 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 13 46 2.0E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_09920 4bf521ce64bf4b8d8d5c3c1f840ff759 82 Gene3D G3DSA:2.10.260.10 4 43 1.6E-9 T 14-10-2018 IM40_09920 4bf521ce64bf4b8d8d5c3c1f840ff759 82 SUPERFAMILY SSF89447 6 55 2.44E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily IM40_09920 4bf521ce64bf4b8d8d5c3c1f840ff759 82 SMART SM00966 5 50 6.0E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_09920 4bf521ce64bf4b8d8d5c3c1f840ff759 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 42 6.4E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 Pfam PF01218 Coproporphyrinogen III oxidase 21 288 3.7E-94 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 SUPERFAMILY SSF102886 13 289 1.28E-110 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 12 289 49.976 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 Gene3D G3DSA:3.40.1500.10 2 289 9.1E-104 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 PRINTS PR00073 Coprogen oxidase signature 137 159 5.5E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 PRINTS PR00073 Coprogen oxidase signature 246 273 5.5E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 PRINTS PR00073 Coprogen oxidase signature 174 203 5.5E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 PRINTS PR00073 Coprogen oxidase signature 274 289 5.5E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 PRINTS PR00073 Coprogen oxidase signature 50 66 5.5E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_01095 4fa4c4614bb9671f5537eee42a20a71b 289 PIRSF PIRSF000166 2 289 4.3E-111 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IM40_04190 f3979194346130ea33788846794f98da 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.2E-37 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 IM40_04190 f3979194346130ea33788846794f98da 91 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.4E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 SUPERFAMILY SSF47729 1 91 1.91E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 SMART SM00411 1 91 5.9E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_04190 f3979194346130ea33788846794f98da 91 Gene3D G3DSA:4.10.520.10 1 91 9.3E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_09060 a8399a3242844b79ee1c74912971a991 155 Pfam PF02556 Preprotein translocase subunit SecB 10 145 2.3E-49 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IM40_09060 a8399a3242844b79ee1c74912971a991 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 149 28.6 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IM40_09060 a8399a3242844b79ee1c74912971a991 155 SUPERFAMILY SSF54611 9 144 1.94E-42 T 14-10-2018 IPR035958 SecB-like superfamily IM40_09060 a8399a3242844b79ee1c74912971a991 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 14 31 1.7E-18 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IM40_09060 a8399a3242844b79ee1c74912971a991 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 101 123 1.7E-18 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IM40_09060 a8399a3242844b79ee1c74912971a991 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 127 145 1.7E-18 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IM40_09060 a8399a3242844b79ee1c74912971a991 155 Gene3D G3DSA:3.10.420.10 4 153 5.8E-53 T 14-10-2018 IPR035958 SecB-like superfamily IM40_09060 a8399a3242844b79ee1c74912971a991 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 144 9.4E-41 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 SUPERFAMILY SSF46894 23 78 8.84E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 SMART SM00421 22 79 6.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 Pfam PF00196 Bacterial regulatory proteins, luxR family 25 77 4.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 Pfam PF00931 NB-ARC domain 355 513 4.1E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 Gene3D G3DSA:1.10.10.10 2 86 3.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 55 67 9.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 25 39 9.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 39 55 9.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 SUPERFAMILY SSF52540 340 514 6.74E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08825 e7dbb4ceaca6efb77a43a233f89bb641 516 Gene3D G3DSA:3.40.50.300 328 509 1.2E-21 T 14-10-2018 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Gene3D G3DSA:3.30.980.10 69 222 1.6E-61 T 14-10-2018 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 SUPERFAMILY SSF52954 530 632 1.81E-28 T 14-10-2018 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Gene3D G3DSA:3.40.50.800 534 635 1.6E-28 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 632 5.4E-213 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 2.2E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 SUPERFAMILY SSF55186 65 241 4.84E-60 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Pfam PF03129 Anticodon binding domain 542 631 5.7E-17 T 14-10-2018 IPR004154 Anticodon-binding IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Gene3D G3DSA:3.30.54.20 130 186 1.6E-61 T 14-10-2018 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 SMART SM00863 169 219 1.0E-24 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Gene3D G3DSA:3.30.930.10 225 533 1.3E-127 T 14-10-2018 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 530 3.2E-42 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 SUPERFAMILY SSF55681 243 527 8.04E-103 T 14-10-2018 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 SUPERFAMILY SSF81271 2 61 2.81E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 4.4E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 4.4E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 4.4E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 4.4E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 4.4E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Pfam PF02824 TGS domain 4 61 3.3E-9 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 34.079 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IM40_03110 1db2fe0a5ae3f69a967b6272099bf95b 637 Gene3D G3DSA:3.10.20.30 1 62 9.2E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily IM40_07200 016c04fad6799583891d3ad08b26c504 199 Gene3D G3DSA:3.90.20.20 30 136 1.7E-26 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 Hamap MF_01151 Protein GrpE [grpE]. 3 194 19.854 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 SUPERFAMILY SSF51064 139 195 8.11E-17 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 Gene3D G3DSA:2.30.22.10 138 194 2.1E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 PRINTS PR00773 GrpE protein signature 87 102 4.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 PRINTS PR00773 GrpE protein signature 59 75 4.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 PRINTS PR00773 GrpE protein signature 173 192 4.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 PRINTS PR00773 GrpE protein signature 146 161 4.1E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 SUPERFAMILY SSF58014 46 138 1.28E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_07200 016c04fad6799583891d3ad08b26c504 199 Pfam PF01025 GrpE 31 194 3.5E-51 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IM40_01380 94c284a35c0c2fedae45751df2192caf 224 Pfam PF00484 Carbonic anhydrase 39 198 1.3E-46 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IM40_01380 94c284a35c0c2fedae45751df2192caf 224 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 44 51 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IM40_01380 94c284a35c0c2fedae45751df2192caf 224 SMART SM00947 32 203 2.2E-55 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IM40_01380 94c284a35c0c2fedae45751df2192caf 224 SUPERFAMILY SSF53056 5 211 4.32E-59 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 IM40_01380 94c284a35c0c2fedae45751df2192caf 224 Gene3D G3DSA:3.40.1050.10 2 210 1.8E-66 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 167 180 5.0E-36 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 111 129 5.0E-36 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 151 164 5.0E-36 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 132 148 5.0E-36 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 97 5.0E-36 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 195 204 5.0E-36 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 3 314 44.979 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 3 314 5.1E-117 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 146 5.7E-60 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 Gene3D G3DSA:3.90.226.10 1 315 1.2E-107 T 14-10-2018 IM40_04060 b66aed42b58ce2b9dcffbdbebca64f06 317 SUPERFAMILY SSF52096 3 313 1.38E-89 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_02150 96af5a3c20d29977bae81fc741194811 466 Gene3D G3DSA:2.40.10.120 35 259 1.1E-75 T 14-10-2018 IM40_02150 96af5a3c20d29977bae81fc741194811 466 SUPERFAMILY SSF50156 225 348 2.66E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_02150 96af5a3c20d29977bae81fc741194811 466 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 7.3E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_02150 96af5a3c20d29977bae81fc741194811 466 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 7.3E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_02150 96af5a3c20d29977bae81fc741194811 466 PRINTS PR00834 HtrA/DegQ protease family signature 101 113 7.3E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_02150 96af5a3c20d29977bae81fc741194811 466 PRINTS PR00834 HtrA/DegQ protease family signature 122 142 7.3E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_02150 96af5a3c20d29977bae81fc741194811 466 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 7.3E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_02150 96af5a3c20d29977bae81fc741194811 466 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 7.3E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_02150 96af5a3c20d29977bae81fc741194811 466 Pfam PF13365 Trypsin-like peptidase domain 92 228 1.0E-33 T 14-10-2018 IM40_02150 96af5a3c20d29977bae81fc741194811 466 SUPERFAMILY SSF50156 376 462 1.84E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_02150 96af5a3c20d29977bae81fc741194811 466 Gene3D G3DSA:2.30.42.10 374 464 3.1E-15 T 14-10-2018 IM40_02150 96af5a3c20d29977bae81fc741194811 466 Gene3D G3DSA:2.30.42.10 262 361 4.9E-21 T 14-10-2018 IM40_02150 96af5a3c20d29977bae81fc741194811 466 Pfam PF13180 PDZ domain 270 356 5.9E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_02150 96af5a3c20d29977bae81fc741194811 466 Pfam PF13180 PDZ domain 394 455 8.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_02150 96af5a3c20d29977bae81fc741194811 466 SMART SM00228 394 459 1.8E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_02150 96af5a3c20d29977bae81fc741194811 466 SMART SM00228 267 349 3.8E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_02150 96af5a3c20d29977bae81fc741194811 466 SUPERFAMILY SSF50494 34 258 8.63E-63 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_02150 96af5a3c20d29977bae81fc741194811 466 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 36 460 1.6E-128 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 IM40_02260 b0e447f991b3abc40f3cda5599070d21 76 SUPERFAMILY SSF47598 2 39 5.44E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_02260 b0e447f991b3abc40f3cda5599070d21 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 37 1.7E-8 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 IM40_07715 23de8638c5a9fa51a99ca87fbb06525a 154 Pfam PF07977 FabA-like domain 22 145 3.6E-33 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IM40_07715 23de8638c5a9fa51a99ca87fbb06525a 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 13 153 32.442 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IM40_07715 23de8638c5a9fa51a99ca87fbb06525a 154 Gene3D G3DSA:3.10.129.10 5 154 1.2E-56 T 14-10-2018 IM40_07715 23de8638c5a9fa51a99ca87fbb06525a 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 14 150 5.0E-54 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IM40_07715 23de8638c5a9fa51a99ca87fbb06525a 154 SUPERFAMILY SSF54637 11 151 1.96E-44 T 14-10-2018 IPR029069 HotDog domain superfamily IM40_06640 23d7a8bdff0d71cd8de2434ec92ee6c9 508 Pfam PF03219 TLC ATP/ADP transporter 10 499 1.2E-198 T 14-10-2018 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0006862|GO:0016021 IM40_06640 23d7a8bdff0d71cd8de2434ec92ee6c9 508 SUPERFAMILY SSF103473 31 493 8.5E-10 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_06640 23d7a8bdff0d71cd8de2434ec92ee6c9 508 TIGRFAM TIGR00769 AAA: ADP/ATP carrier protein family 23 499 1.1E-188 T 14-10-2018 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0006862|GO:0016021 IM40_07540 1a62086b99f91cabfae5fb8d6aaac04f 1421 SUPERFAMILY SSF52540 108 309 9.74E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07540 1a62086b99f91cabfae5fb8d6aaac04f 1421 Pfam PF14331 ImcF-related N-terminal domain 180 428 9.9E-52 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 SUPERFAMILY SSF52833 5 103 1.51E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 100 1.7E-33 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 PRINTS PR00421 Thioredoxin family signature 21 29 7.7E-9 T 14-10-2018 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 PRINTS PR00421 Thioredoxin family signature 29 38 7.7E-9 T 14-10-2018 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 PRINTS PR00421 Thioredoxin family signature 68 79 7.7E-9 T 14-10-2018 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 PIRSF PIRSF000077 1 103 4.6E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 Pfam PF00085 Thioredoxin 4 100 8.3E-31 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 IM40_05115 3a364e585e881c63fe47c33e002cd30a 103 Gene3D G3DSA:3.40.30.10 1 103 6.9E-31 T 14-10-2018 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 Gene3D G3DSA:3.30.565.10 216 347 3.6E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 SUPERFAMILY SSF55785 9 103 4.01E-17 T 14-10-2018 IPR035965 PAS domain superfamily IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 112 4.0E-14 T 14-10-2018 IPR000014 PAS domain IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 Gene3D G3DSA:3.30.450.20 1 102 2.6E-18 T 14-10-2018 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 Gene3D G3DSA:1.10.287.130 103 198 3.4E-7 T 14-10-2018 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 SUPERFAMILY SSF47384 113 187 2.94E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 SMART SM00387 231 343 7.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 SUPERFAMILY SSF55874 198 343 8.12E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 Pfam PF13426 PAS domain 4 104 4.6E-14 T 14-10-2018 IPR000014 PAS domain IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 SMART SM00086 63 105 2.8E-4 T 14-10-2018 IPR001610 PAC motif IM40_06330 5f390d870c7f1692f0eb2e1c3b69b376 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 340 2.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 Pfam PF13426 PAS domain 21 123 2.6E-10 T 14-10-2018 IPR000014 PAS domain IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 SUPERFAMILY SSF55785 16 123 1.2E-17 T 14-10-2018 IPR035965 PAS domain superfamily IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 318 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 Gene3D G3DSA:3.30.450.20 7 121 2.8E-19 T 14-10-2018 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 Gene3D G3DSA:1.10.287.130 122 209 4.7E-5 T 14-10-2018 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 Gene3D G3DSA:3.30.565.10 219 361 6.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 SMART SM00086 83 125 0.007 T 14-10-2018 IPR001610 PAC motif IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 SMART SM00091 9 77 1.2E-5 T 14-10-2018 IPR000014 PAS domain IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 360 6.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 SUPERFAMILY SSF47384 133 207 5.89E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 SMART SM00387 251 363 3.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 130 6.5E-16 T 14-10-2018 IPR000014 PAS domain IM40_03585 a52fa3a02b94da3824e4c34fcce961e0 374 SUPERFAMILY SSF55874 206 363 1.7E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_10380 57522fdad42125b5139d659a05040ac4 348 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 38 338 9.9E-20 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 IM40_10380 57522fdad42125b5139d659a05040ac4 348 Gene3D G3DSA:3.30.420.40 38 157 8.2E-54 T 14-10-2018 IM40_10380 57522fdad42125b5139d659a05040ac4 348 SUPERFAMILY SSF53067 160 320 1.15E-30 T 14-10-2018 IM40_10380 57522fdad42125b5139d659a05040ac4 348 Gene3D G3DSA:3.30.420.40 158 317 8.2E-54 T 14-10-2018 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 Gene3D G3DSA:1.20.20.10 3 74 1.6E-23 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 SUPERFAMILY SSF81333 5 73 1.7E-17 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 7.0E-22 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 7.0E-22 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 7.0E-22 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 14.516 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00685 ce2780b7c7ce27692ac2cd922f8beaec 74 Pfam PF00137 ATP synthase subunit C 9 71 2.9E-13 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 IM40_05505 d422525a885c19af30a1624fd5faa1c6 383 Pfam PF00534 Glycosyl transferases group 1 188 358 2.5E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 IM40_05505 d422525a885c19af30a1624fd5faa1c6 383 Pfam PF13439 Glycosyltransferase Family 4 19 175 2.3E-29 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IM40_05505 d422525a885c19af30a1624fd5faa1c6 383 Gene3D G3DSA:3.40.50.2000 172 363 4.8E-71 T 14-10-2018 IM40_05505 d422525a885c19af30a1624fd5faa1c6 383 SUPERFAMILY SSF53756 9 381 1.74E-77 T 14-10-2018 IM40_05505 d422525a885c19af30a1624fd5faa1c6 383 Gene3D G3DSA:3.40.50.2000 32 376 4.8E-71 T 14-10-2018 IM40_04820 c3f4014f9f7c8dd9dec94cc1e5cd3eb7 205 Gene3D G3DSA:3.40.30.10 3 92 2.7E-19 T 14-10-2018 IM40_04820 c3f4014f9f7c8dd9dec94cc1e5cd3eb7 205 Gene3D G3DSA:1.20.1050.10 93 178 4.6E-8 T 14-10-2018 IM40_04820 c3f4014f9f7c8dd9dec94cc1e5cd3eb7 205 Pfam PF13410 Glutathione S-transferase, C-terminal domain 124 175 4.5E-7 T 14-10-2018 IM40_04820 c3f4014f9f7c8dd9dec94cc1e5cd3eb7 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 76 2.9E-18 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IM40_04820 c3f4014f9f7c8dd9dec94cc1e5cd3eb7 205 SUPERFAMILY SSF47616 90 190 5.22E-16 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IM40_04820 c3f4014f9f7c8dd9dec94cc1e5cd3eb7 205 SUPERFAMILY SSF52833 7 80 3.94E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_05765 35acbbf56eff7b68206fa68da671c4ad 305 SUPERFAMILY SSF103481 183 281 1.96E-8 T 14-10-2018 IM40_05765 35acbbf56eff7b68206fa68da671c4ad 305 SUPERFAMILY SSF103481 38 133 1.7E-10 T 14-10-2018 IM40_05765 35acbbf56eff7b68206fa68da671c4ad 305 Pfam PF00892 EamA-like transporter family 6 130 1.4E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_05765 35acbbf56eff7b68206fa68da671c4ad 305 Pfam PF00892 EamA-like transporter family 142 281 2.4E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_03665 91882165b74762711ee932e1ef85f086 236 SUPERFAMILY SSF56925 28 235 8.37E-8 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IM40_03665 91882165b74762711ee932e1ef85f086 236 Gene3D G3DSA:2.40.160.20 25 236 4.7E-6 T 14-10-2018 IM40_02165 41dcfc0bd428bde1607922d9e3028d64 323 SUPERFAMILY SSF140931 79 253 7.06E-37 T 14-10-2018 IPR036597 Fido-like domain superfamily IM40_02165 41dcfc0bd428bde1607922d9e3028d64 323 Gene3D G3DSA:1.10.3290.10 31 259 1.9E-50 T 14-10-2018 IPR036597 Fido-like domain superfamily IM40_02165 41dcfc0bd428bde1607922d9e3028d64 323 Pfam PF02661 Fic/DOC family 98 197 1.2E-21 T 14-10-2018 IPR003812 Fido domain IM40_11065 9e899286ba61d48f85027d8157995168 83 SUPERFAMILY SSF142921 6 59 2.88E-5 T 14-10-2018 IPR036930 WGR domain superfamily IM40_11065 9e899286ba61d48f85027d8157995168 83 Pfam PF05406 WGR domain 5 65 1.6E-4 T 14-10-2018 IPR008893 WGR domain IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 195 1.9E-36 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 SUPERFAMILY SSF54719 90 201 8.38E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 87 2.0E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 Gene3D G3DSA:1.10.287.990 20 88 1.3E-21 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 162 169 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 Gene3D G3DSA:2.40.500.20 89 202 2.9E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 SUPERFAMILY SSF46609 1 89 1.57E-33 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 3.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 PRINTS PR01703 Manganese superoxide dismutase signature 160 172 3.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 3.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_08735 20e23c0bb27691428fac5dbb6cf8d436 202 PIRSF PIRSF000349 1 202 1.6E-81 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IM40_04935 ba3f28389ef62fbb087f8c385053017f 83 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 67 2.2E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 IM40_04935 ba3f28389ef62fbb087f8c385053017f 83 Pfam PF17209 Hfq protein 9 71 5.4E-33 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 IM40_04935 ba3f28389ef62fbb087f8c385053017f 83 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 67 28.756 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 IM40_04935 ba3f28389ef62fbb087f8c385053017f 83 SUPERFAMILY SSF50182 8 73 7.63E-25 T 14-10-2018 IPR010920 LSM domain superfamily IM40_04935 ba3f28389ef62fbb087f8c385053017f 83 Gene3D G3DSA:2.30.30.100 2 81 6.1E-33 T 14-10-2018 IM40_02405 8a0f7f27d61eaa9555f5048b8c7f16c8 432 SUPERFAMILY SSF63411 5 206 2.0E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IM40_02405 8a0f7f27d61eaa9555f5048b8c7f16c8 432 Pfam PF00675 Insulinase (Peptidase family M16) 19 136 5.6E-22 T 14-10-2018 IPR011765 Peptidase M16, N-terminal IM40_02405 8a0f7f27d61eaa9555f5048b8c7f16c8 432 SUPERFAMILY SSF63411 225 412 2.0E-27 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IM40_02405 8a0f7f27d61eaa9555f5048b8c7f16c8 432 Gene3D G3DSA:3.30.830.10 234 422 4.2E-28 T 14-10-2018 IM40_02405 8a0f7f27d61eaa9555f5048b8c7f16c8 432 Pfam PF05193 Peptidase M16 inactive domain 166 342 1.3E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal IM40_02405 8a0f7f27d61eaa9555f5048b8c7f16c8 432 Gene3D G3DSA:3.30.830.10 4 215 3.6E-46 T 14-10-2018 IM40_04540 c5f67e432e9200f53169af71c454f885 309 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 SUPERFAMILY SSF46934 4 55 1.61E-19 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 IM40_04540 c5f67e432e9200f53169af71c454f885 309 Gene3D G3DSA:3.30.479.20 57 148 2.4E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 Gene3D G3DSA:1.10.286.20 203 247 9.2E-40 T 14-10-2018 IM40_04540 c5f67e432e9200f53169af71c454f885 309 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 SUPERFAMILY SSF54713 57 146 1.42E-19 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 Hamap MF_00050 Elongation factor Ts [tsf]. 1 307 72.425 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 308 1.1E-89 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 SUPERFAMILY SSF54713 150 308 1.96E-41 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 Gene3D G3DSA:3.30.479.20 150 289 9.2E-40 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IM40_04540 c5f67e432e9200f53169af71c454f885 309 Gene3D G3DSA:1.10.8.10 1 56 2.4E-27 T 14-10-2018 IM40_04540 c5f67e432e9200f53169af71c454f885 309 Pfam PF00889 Elongation factor TS 71 290 2.0E-63 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Pfam PF13362 Toprim domain 1524 1620 4.4E-12 T 14-10-2018 IPR006171 TOPRIM domain IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 SUPERFAMILY SSF52540 361 570 5.87E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 SUPERFAMILY SSF57783 1332 1381 4.25E-6 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Gene3D G3DSA:3.30.930.30 2 217 4.1E-38 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Gene3D G3DSA:3.40.1360.10 1509 1631 2.7E-9 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 SUPERFAMILY SSF52540 577 829 6.11E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Pfam PF03389 MobA/MobL family 184 235 7.5E-9 T 14-10-2018 IPR005053 MobA/MobL protein IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Pfam PF03389 MobA/MobL family 18 79 2.3E-9 T 14-10-2018 IPR005053 MobA/MobL protein IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Pfam PF03389 MobA/MobL family 110 175 2.6E-12 T 14-10-2018 IPR005053 MobA/MobL protein IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Gene3D G3DSA:3.90.580.10 1318 1385 6.4E-6 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Gene3D G3DSA:2.30.30.940 675 787 1.4E-40 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Pfam PF13604 AAA domain 413 624 1.3E-35 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 SUPERFAMILY SSF56731 1513 1636 5.23E-6 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Gene3D G3DSA:3.40.50.300 593 804 1.4E-40 T 14-10-2018 IM40_09300 981b1a67e1750259d8be1c6d64d941b6 1861 Gene3D G3DSA:3.40.50.300 403 592 1.4E-40 T 14-10-2018 IM40_09235 9937aff46a44e723514dcffba1ebfe12 817 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 204 399 3.2E-15 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 IM40_09235 9937aff46a44e723514dcffba1ebfe12 817 Gene3D G3DSA:3.40.50.300 609 783 6.3E-16 T 14-10-2018 IM40_09235 9937aff46a44e723514dcffba1ebfe12 817 SUPERFAMILY SSF52540 409 729 7.6E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11235 9937aff46a44e723514dcffba1ebfe12 817 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 204 399 3.2E-15 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 IM40_11235 9937aff46a44e723514dcffba1ebfe12 817 Gene3D G3DSA:3.40.50.300 609 783 6.3E-16 T 14-10-2018 IM40_11235 9937aff46a44e723514dcffba1ebfe12 817 SUPERFAMILY SSF52540 409 729 7.6E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 Gene3D G3DSA:1.10.1200.80 255 325 1.1E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 SUPERFAMILY SSF51395 14 320 4.39E-90 T 14-10-2018 IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 PIRSF PIRSF006621 2 328 3.9E-111 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 Pfam PF01207 Dihydrouridine synthase (Dus) 15 317 1.4E-109 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 Gene3D G3DSA:3.20.20.70 8 250 8.5E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_05935 7e5ab673a14ab4dd641e6a14b387e835 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 5 321 3.8E-125 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 IM40_06970 1615d836454df9ae057258502e112b04 520 PIRSF PIRSF002869 1 514 4.0E-143 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 Pfam PF03023 MviN-like protein 28 468 4.4E-108 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 33 52 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 133 157 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 157 178 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 52 68 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 358 377 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 260 286 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 PRINTS PR01806 Virulence factor MviN signature 410 427 3.1E-59 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 501 1.7E-118 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06970 1615d836454df9ae057258502e112b04 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 18.322 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_00795 665be8b5d647747cf28701240093a6f8 222 SUPERFAMILY SSF53335 7 183 2.09E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00795 665be8b5d647747cf28701240093a6f8 222 Gene3D G3DSA:3.40.50.150 5 209 4.5E-36 T 14-10-2018 IM40_00795 665be8b5d647747cf28701240093a6f8 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 184 1.7E-27 T 14-10-2018 IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 ProDom PD069361 HYDROLASE VIRULENCE PLASMID AVRBS1.1 HEXAPHOSPHATE TYROSINE PHOSPHOHYDROLASE PRECURSOR MYO-INOSITOL AVIRULENCE 183 277 1.0E-12 T 14-10-2018 IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 Gene3D G3DSA:3.30.70.1690 91 144 4.2E-58 T 14-10-2018 IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 Gene3D G3DSA:3.90.190.10 34 278 4.2E-58 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 Pfam PF14566 Inositol hexakisphosphate 140 210 2.0E-13 T 14-10-2018 IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 SUPERFAMILY SSF52799 43 227 9.48E-24 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 191 201 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 IM40_06835 f6cf9d0192863a64773c276e4588a42d 291 SMART SM01301 86 211 1.3E-15 T 14-10-2018 IM40_04555 74225c72351081502c35c30a00e71b8f 497 Gene3D G3DSA:3.40.190.10 112 218 9.0E-25 T 14-10-2018 IM40_04555 74225c72351081502c35c30a00e71b8f 497 Gene3D G3DSA:3.40.190.10 32 252 9.0E-25 T 14-10-2018 IM40_04555 74225c72351081502c35c30a00e71b8f 497 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 259 4.7E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IM40_04555 74225c72351081502c35c30a00e71b8f 497 Pfam PF03458 UPF0126 domain 275 348 3.5E-14 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 IM40_04555 74225c72351081502c35c30a00e71b8f 497 Pfam PF03458 UPF0126 domain 378 453 1.1E-12 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 IM40_04555 74225c72351081502c35c30a00e71b8f 497 SUPERFAMILY SSF53850 26 259 4.15E-31 T 14-10-2018 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 SMART SM00411 6 95 2.6E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 1.7E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 1.7E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 1.7E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 Pfam PF00216 Bacterial DNA-binding protein 6 94 1.0E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 SUPERFAMILY SSF47729 6 94 2.8E-22 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_02955 13fcc123d93e1782c0fcbe08f3f60f7e 97 Gene3D G3DSA:4.10.520.10 4 97 8.5E-24 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_00805 c24845baa6f53ffd6bb9685680ae7b93 513 SUPERFAMILY SSF56954 62 468 3.4E-66 T 14-10-2018 IM40_00805 c24845baa6f53ffd6bb9685680ae7b93 513 Gene3D G3DSA:1.20.1600.10 62 478 3.5E-74 T 14-10-2018 IM40_00805 c24845baa6f53ffd6bb9685680ae7b93 513 Pfam PF02321 Outer membrane efflux protein 282 464 3.2E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IM40_00805 c24845baa6f53ffd6bb9685680ae7b93 513 Pfam PF02321 Outer membrane efflux protein 64 255 4.2E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IM40_00805 c24845baa6f53ffd6bb9685680ae7b93 513 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 59 475 2.7E-76 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 IM40_01710 a8cbfcf784ac3da459680f946fa9c892 521 Pfam PF01738 Dienelactone hydrolase family 267 434 1.1E-11 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 IM40_01710 a8cbfcf784ac3da459680f946fa9c892 521 Gene3D G3DSA:3.40.50.1820 230 440 1.7E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_01710 a8cbfcf784ac3da459680f946fa9c892 521 SUPERFAMILY SSF53474 239 514 1.2E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_11205 324f810e721052673e11c6ae480fdb4f 345 Gene3D G3DSA:2.40.128.260 138 316 4.6E-48 T 14-10-2018 IM40_11205 324f810e721052673e11c6ae480fdb4f 345 Gene3D G3DSA:1.10.1200.160 262 297 4.6E-48 T 14-10-2018 IM40_11205 324f810e721052673e11c6ae480fdb4f 345 Pfam PF03743 Bacterial conjugation TrbI-like protein 135 318 6.1E-41 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI IM40_09265 324f810e721052673e11c6ae480fdb4f 345 Gene3D G3DSA:2.40.128.260 138 316 4.6E-48 T 14-10-2018 IM40_09265 324f810e721052673e11c6ae480fdb4f 345 Gene3D G3DSA:1.10.1200.160 262 297 4.6E-48 T 14-10-2018 IM40_09265 324f810e721052673e11c6ae480fdb4f 345 Pfam PF03743 Bacterial conjugation TrbI-like protein 135 318 6.1E-41 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI IM40_04215 ee3be68cb7eb9e33bbb2921635189241 719 Pfam PF00924 Mechanosensitive ion channel 497 698 1.3E-36 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 IM40_04215 ee3be68cb7eb9e33bbb2921635189241 719 Gene3D G3DSA:3.30.70.100 607 696 2.1E-19 T 14-10-2018 IM40_04215 ee3be68cb7eb9e33bbb2921635189241 719 SUPERFAMILY SSF50182 540 602 1.73E-12 T 14-10-2018 IPR010920 LSM domain superfamily IM40_04215 ee3be68cb7eb9e33bbb2921635189241 719 Gene3D G3DSA:2.30.30.60 556 604 3.0E-16 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily IM40_04215 ee3be68cb7eb9e33bbb2921635189241 719 SUPERFAMILY SSF82861 449 538 2.48E-10 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 IM40_04215 ee3be68cb7eb9e33bbb2921635189241 719 SUPERFAMILY SSF82689 604 703 1.96E-13 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 IM40_02045 ac77a410a5101448202a998c42e9a8cf 126 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 24.069 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02045 ac77a410a5101448202a998c42e9a8cf 126 SUPERFAMILY SSF54843 13 122 3.79E-38 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02045 ac77a410a5101448202a998c42e9a8cf 126 Pfam PF00237 Ribosomal protein L22p/L17e 18 120 8.6E-31 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 IM40_02045 ac77a410a5101448202a998c42e9a8cf 126 Gene3D G3DSA:3.90.470.10 2 126 1.6E-39 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02045 ac77a410a5101448202a998c42e9a8cf 126 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 118 1.8E-29 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04530 5d6996158269b677357df0a19fdcb621 185 Gene3D G3DSA:3.30.1360.40 31 105 3.1E-65 T 14-10-2018 IM40_04530 5d6996158269b677357df0a19fdcb621 185 Gene3D G3DSA:1.10.132.20 12 182 3.1E-65 T 14-10-2018 IM40_04530 5d6996158269b677357df0a19fdcb621 185 Pfam PF01765 Ribosome recycling factor 20 183 7.4E-58 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 IM40_04530 5d6996158269b677357df0a19fdcb621 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 24.453 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 IM40_04530 5d6996158269b677357df0a19fdcb621 185 SUPERFAMILY SSF55194 4 185 9.03E-66 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 IM40_04530 5d6996158269b677357df0a19fdcb621 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 9.5E-64 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Gene3D G3DSA:1.10.1780.10 2 149 9.0E-26 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 SUPERFAMILY SSF52540 160 545 8.64E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 SUPERFAMILY SSF52540 546 844 3.96E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 321 3.0E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Gene3D G3DSA:3.40.50.300 550 765 1.2E-87 T 14-10-2018 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 SMART SM00382 200 345 8.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 SMART SM00382 597 763 8.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 SMART SM01086 766 853 2.9E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Gene3D G3DSA:3.40.50.300 345 544 2.3E-74 T 14-10-2018 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 6.6E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.7E-5 T 14-10-2018 IPR004176 Clp, N-terminal IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 2.8E-8 T 14-10-2018 IPR004176 Clp, N-terminal IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Gene3D G3DSA:3.40.50.300 150 344 2.0E-74 T 14-10-2018 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 9.0E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 9.0E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 9.0E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 9.0E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 2.5E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 Gene3D G3DSA:1.10.8.60 766 857 2.7E-26 T 14-10-2018 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 SUPERFAMILY SSF81923 5 158 3.04E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 IM40_05500 35a36c038c38a7fdec0de9435f13af10 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 851 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 IM40_08760 9b0c3673d0100bcc80a6041c7fa8eb2f 208 PIRSF PIRSF005229 6 208 2.5E-98 T 14-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 IM40_08760 9b0c3673d0100bcc80a6041c7fa8eb2f 208 Gene3D G3DSA:1.20.1260.140 6 208 3.8E-88 T 14-10-2018 IPR038659 Alternative oxidase superfamily IM40_08760 9b0c3673d0100bcc80a6041c7fa8eb2f 208 Pfam PF01786 Alternative oxidase 11 203 6.2E-81 T 14-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 Pfam PF08388 Group II intron, maturase-specific domain 326 394 2.7E-12 T 14-10-2018 IPR013597 Group II intron, maturase-specific IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 92 303 5.6E-40 T 14-10-2018 IPR000477 Reverse transcriptase domain IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 Gene3D G3DSA:3.30.70.270 232 303 1.7E-5 T 14-10-2018 IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 213 226 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 87 100 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 155 173 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 36 391 2.3E-115 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase IM40_09755 499aba116c93d1fd5648599e0ce9b0ac 426 SUPERFAMILY SSF56672 22 334 2.61E-48 T 14-10-2018 IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 Pfam PF08388 Group II intron, maturase-specific domain 326 394 2.7E-12 T 14-10-2018 IPR013597 Group II intron, maturase-specific IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 92 303 5.6E-40 T 14-10-2018 IPR000477 Reverse transcriptase domain IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 Gene3D G3DSA:3.30.70.270 232 303 1.7E-5 T 14-10-2018 IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 213 226 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 87 100 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 155 173 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 36 391 2.3E-115 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase IM40_11180 499aba116c93d1fd5648599e0ce9b0ac 426 SUPERFAMILY SSF56672 22 334 2.61E-48 T 14-10-2018 IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 Pfam PF08388 Group II intron, maturase-specific domain 326 394 2.7E-12 T 14-10-2018 IPR013597 Group II intron, maturase-specific IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 92 303 5.6E-40 T 14-10-2018 IPR000477 Reverse transcriptase domain IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 Gene3D G3DSA:3.30.70.270 232 303 1.7E-5 T 14-10-2018 IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 213 226 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 87 100 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 155 173 1.9E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 36 391 2.3E-115 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase IM40_04250 499aba116c93d1fd5648599e0ce9b0ac 426 SUPERFAMILY SSF56672 22 334 2.61E-48 T 14-10-2018 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 Gene3D G3DSA:3.20.20.140 2 279 3.8E-79 T 14-10-2018 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1039 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 Gene3D G3DSA:1.10.10.1600 447 522 6.9E-26 T 14-10-2018 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 SUPERFAMILY SSF89550 9 273 9.61E-12 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 Pfam PF14579 Helix-hairpin-helix motif 812 905 2.6E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 Pfam PF02811 PHP domain 8 183 7.9E-35 T 14-10-2018 IPR004013 PHP domain GO:0003824 IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 SMART SM00481 6 73 1.6E-17 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal IM40_03635 4ba9cb5c825fd81d1c5fc8f9693cea9b 1158 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 300 738 2.9E-169 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_01615 a1a329c1d6b5f9635b47f09639afb23c 486 SUPERFAMILY SSF82171 134 451 4.32E-8 T 14-10-2018 IM40_01615 a1a329c1d6b5f9635b47f09639afb23c 486 SUPERFAMILY SSF81383 48 99 1.05E-6 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_05710 a1d836a9547a50eb7fbce1f2acfd545e 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 109 1.4E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 IM40_05710 a1d836a9547a50eb7fbce1f2acfd545e 113 Gene3D G3DSA:2.60.300.12 7 113 1.1E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IM40_05710 a1d836a9547a50eb7fbce1f2acfd545e 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 IM40_05710 a1d836a9547a50eb7fbce1f2acfd545e 113 SUPERFAMILY SSF89360 6 99 1.49E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IM40_05710 a1d836a9547a50eb7fbce1f2acfd545e 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 113 4.7E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 IM40_00520 e9d4c4ea07e17f4ca667f1db733a0d5b 181 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 15 180 1.9E-60 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 IM40_00520 e9d4c4ea07e17f4ca667f1db733a0d5b 181 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 181 25.377 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 IM40_00520 e9d4c4ea07e17f4ca667f1db733a0d5b 181 SUPERFAMILY SSF47240 14 148 1.31E-15 T 14-10-2018 IPR009078 Ferritin-like superfamily IM40_00520 e9d4c4ea07e17f4ca667f1db733a0d5b 181 Gene3D G3DSA:1.20.1260.10 3 72 3.3E-6 T 14-10-2018 IPR012347 Ferritin-like IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 803 814 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 668 683 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 720 733 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 865 878 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 645 667 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 835 851 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 781 792 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 690 713 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 744 769 1.5E-72 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 SMART SM00475 7 262 1.7E-118 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 IM40_00240 302737c434ac02b76b091804b329f812 918 SUPERFAMILY SSF53098 309 507 9.19E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_00240 302737c434ac02b76b091804b329f812 918 Gene3D G3DSA:1.10.150.20 699 842 5.1E-105 T 14-10-2018 IM40_00240 302737c434ac02b76b091804b329f812 918 Gene3D G3DSA:3.30.70.370 654 914 5.1E-105 T 14-10-2018 IM40_00240 302737c434ac02b76b091804b329f812 918 SUPERFAMILY SSF47807 171 286 1.18E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IM40_00240 302737c434ac02b76b091804b329f812 918 Gene3D G3DSA:1.10.150.20 174 247 2.6E-96 T 14-10-2018 IM40_00240 302737c434ac02b76b091804b329f812 918 Gene3D G3DSA:3.30.420.10 308 531 8.3E-64 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_00240 302737c434ac02b76b091804b329f812 918 ProSitePatterns PS00447 DNA polymerase family A signature. 744 763 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 SMART SM00479 331 508 0.003 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IM40_00240 302737c434ac02b76b091804b329f812 918 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 265 9.7E-32 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 IM40_00240 302737c434ac02b76b091804b329f812 918 Pfam PF01612 3'-5' exonuclease 311 506 5.2E-33 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IM40_00240 302737c434ac02b76b091804b329f812 918 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 170 9.6E-55 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 IM40_00240 302737c434ac02b76b091804b329f812 918 SUPERFAMILY SSF88723 7 161 2.24E-53 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_00240 302737c434ac02b76b091804b329f812 918 SMART SM00279 173 208 2.0E-17 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 IM40_00240 302737c434ac02b76b091804b329f812 918 Gene3D G3DSA:3.40.50.1010 10 278 2.6E-96 T 14-10-2018 IM40_00240 302737c434ac02b76b091804b329f812 918 TIGRFAM TIGR00593 pola: DNA polymerase I 9 917 6.5E-290 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 Pfam PF00476 DNA polymerase family A 540 916 5.0E-146 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 SMART SM00474 311 507 3.6E-33 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IM40_00240 302737c434ac02b76b091804b329f812 918 SUPERFAMILY SSF56672 513 916 1.89E-142 T 14-10-2018 IM40_00240 302737c434ac02b76b091804b329f812 918 SMART SM00482 676 882 8.7E-107 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_00240 302737c434ac02b76b091804b329f812 918 Gene3D G3DSA:1.20.1060.10 532 648 7.8E-38 T 14-10-2018 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00421 31 88 1.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SUPERFAMILY SSF52540 345 585 1.01E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 1038 1071 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 869 902 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 827 860 73.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 996 1029 77.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 912 945 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 954 987 24.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SMART SM00028 785 818 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Gene3D G3DSA:1.10.10.10 3 94 1.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Pfam PF00196 Bacterial regulatory proteins, luxR family 34 87 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Gene3D G3DSA:1.25.40.10 902 999 9.9E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SUPERFAMILY SSF48452 949 1089 2.59E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Gene3D G3DSA:1.25.40.10 706 901 1.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Pfam PF00931 NB-ARC domain 355 583 2.8E-12 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Pfam PF13424 Tetratricopeptide repeat 999 1069 3.6E-8 T 14-10-2018 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Pfam PF13424 Tetratricopeptide repeat 915 981 1.9E-7 T 14-10-2018 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Gene3D G3DSA:3.40.50.300 322 497 1.3E-19 T 14-10-2018 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 Gene3D G3DSA:1.25.40.10 1000 1137 8.7E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SUPERFAMILY SSF46894 22 88 7.14E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SUPERFAMILY SSF48452 747 860 1.0E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 SUPERFAMILY SSF48452 828 942 3.22E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 48 64 9.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 34 48 9.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10200 48979d87f9ffc610f67984830eb43a0d 1141 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 64 76 9.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_10445 18af7d90ccd25a152d778e9d620fc480 292 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 50 246 1.0E-6 T 14-10-2018 IM40_10445 18af7d90ccd25a152d778e9d620fc480 292 Gene3D G3DSA:3.40.50.1000 21 232 3.9E-6 T 14-10-2018 IPR023214 HAD superfamily IM40_10445 18af7d90ccd25a152d778e9d620fc480 292 Pfam PF11019 Protein of unknown function (DUF2608) 41 250 5.5E-33 T 14-10-2018 IPR022565 Protein of unknown function DUF2608 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 SUPERFAMILY SSF69279 343 488 1.45E-16 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 Gene3D G3DSA:3.30.1920.30 350 413 3.3E-70 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 Gene3D G3DSA:2.30.110.50 78 143 6.5E-9 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 SUPERFAMILY SSF69349 804 953 5.96E-9 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 Gene3D G3DSA:3.55.50.10 223 315 3.3E-70 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 SUPERFAMILY SSF69279 82 135 3.4E-7 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 SUPERFAMILY SSF69349 599 725 1.65E-18 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 Pfam PF05954 Phage late control gene D protein (GPD) 97 455 3.4E-64 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 SUPERFAMILY SSF69279 188 309 5.1E-38 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 189 526 4.1E-87 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 89 526 1.6E-64 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 559 661 2.8E-38 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 Gene3D G3DSA:2.40.50.230 479 614 5.0E-39 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 Gene3D G3DSA:2.30.110.50 188 454 3.3E-70 T 14-10-2018 IM40_08875 86132a8f752cfc7a632657a873e866f7 1029 SUPERFAMILY SSF69255 488 609 1.94E-28 T 14-10-2018 IM40_00935 1842a96bd252d2ac848d7576841ba64b 438 Gene3D G3DSA:3.30.830.10 239 434 1.9E-37 T 14-10-2018 IM40_00935 1842a96bd252d2ac848d7576841ba64b 438 Pfam PF05193 Peptidase M16 inactive domain 189 361 4.1E-24 T 14-10-2018 IPR007863 Peptidase M16, C-terminal IM40_00935 1842a96bd252d2ac848d7576841ba64b 438 SUPERFAMILY SSF63411 23 242 1.08E-37 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IM40_00935 1842a96bd252d2ac848d7576841ba64b 438 SUPERFAMILY SSF63411 247 433 1.35E-33 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IM40_00935 1842a96bd252d2ac848d7576841ba64b 438 Gene3D G3DSA:3.30.830.10 30 233 1.4E-36 T 14-10-2018 IM40_00935 1842a96bd252d2ac848d7576841ba64b 438 Pfam PF00675 Insulinase (Peptidase family M16) 38 169 7.5E-6 T 14-10-2018 IPR011765 Peptidase M16, N-terminal IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 Pfam PF13416 Bacterial extracellular solute-binding protein 40 306 3.8E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 167 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 195 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 213 232 3.6E-38 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 Gene3D G3DSA:3.40.190.10 28 329 1.4E-109 T 14-10-2018 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 SUPERFAMILY SSF53850 24 362 6.21E-79 T 14-10-2018 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 PIRSF PIRSF019574 2 363 1.4E-102 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 IM40_01695 8c9b3b14e52858fdd1638496ddbda3cf 363 Gene3D G3DSA:3.40.190.10 132 357 1.4E-109 T 14-10-2018 IM40_02915 bdc86187c06573dab1b193afea4a8a99 279 Gene3D G3DSA:1.10.10.10 7 97 8.8E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_02915 bdc86187c06573dab1b193afea4a8a99 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 64 2.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_02915 bdc86187c06573dab1b193afea4a8a99 279 SUPERFAMILY SSF46785 8 112 6.12E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_02915 bdc86187c06573dab1b193afea4a8a99 279 Pfam PF03466 LysR substrate binding domain 93 254 2.8E-7 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_02915 bdc86187c06573dab1b193afea4a8a99 279 SUPERFAMILY SSF53850 93 254 5.12E-12 T 14-10-2018 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 472 39.677 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 SUPERFAMILY SSF53244 324 468 3.97E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Pfam PF08245 Mur ligase middle domain 113 304 3.5E-23 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Pfam PF01225 Mur ligase family, catalytic domain 11 107 2.4E-26 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Gene3D G3DSA:3.40.50.720 10 96 2.6E-29 T 14-10-2018 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 465 4.9E-151 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Gene3D G3DSA:3.90.190.20 323 479 1.8E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Gene3D G3DSA:3.40.1190.10 97 322 2.7E-68 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 SUPERFAMILY SSF51984 11 95 3.01E-24 T 14-10-2018 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 408 7.4E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IM40_02855 4ed1d98e5477c747d902a9ce3ca73f7f 491 SUPERFAMILY SSF53623 94 323 8.37E-63 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 Pfam PF00733 Asparagine synthase 255 635 2.1E-115 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 PIRSF PIRSF001589 1 637 8.1E-170 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 SUPERFAMILY SSF52402 247 630 3.14E-95 T 14-10-2018 IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 SUPERFAMILY SSF56235 1 227 2.57E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 570 6.4E-154 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 Gene3D G3DSA:3.60.20.10 3 192 1.5E-61 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_04770 85054f87008ea8f5a6215be9bfd95b8f 637 Pfam PF13537 Glutamine amidotransferase domain 53 173 6.7E-46 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 36 71 8.6E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Pfam PF07676 WD40-like Beta Propeller Repeat 459 485 0.016 T 14-10-2018 IPR011659 WD40-like Beta Propeller IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 SUPERFAMILY SSF69304 4 269 1.7E-36 T 14-10-2018 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 SUPERFAMILY SSF69322 237 632 1.44E-21 T 14-10-2018 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Gene3D G3DSA:2.120.10.60 1 267 2.5E-92 T 14-10-2018 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Gene3D G3DSA:2.130.10.10 286 651 1.3E-114 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Pfam PF14684 Tricorn protease C1 domain 672 739 9.3E-29 T 14-10-2018 IPR028204 Tricorn protease C1 domain IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 PIRSF PIRSF036421 1 1058 0.0 T 14-10-2018 IPR012393 Tricorn protease GO:0008236 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Pfam PF14685 Tricorn protease PDZ domain 750 840 3.2E-20 T 14-10-2018 IPR029414 Tricorn protease, PDZ domain IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Gene3D G3DSA:3.90.226.10 847 1060 2.2E-72 T 14-10-2018 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 SMART SM00245 835 1025 5.9E-31 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Pfam PF03572 Peptidase family S41 869 1024 1.9E-21 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Gene3D G3DSA:3.30.750.44 670 739 4.6E-34 T 14-10-2018 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 Gene3D G3DSA:2.30.42.10 748 844 1.0E-8 T 14-10-2018 IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 SUPERFAMILY SSF52096 670 1050 1.09E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_05220 3a0ea4517f7c45ede98a97db71d7bcb7 1065 SUPERFAMILY SSF50156 750 839 2.2E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_09400 9e0fb310b7332e813950f5ae18553009 95 Pfam PF02371 Transposase IS116/IS110/IS902 family 2 50 2.6E-6 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_04705 a42f939bfeb82c031ee19fb7137a27eb 549 Gene3D G3DSA:3.10.50.40 229 284 2.1E-12 T 14-10-2018 IM40_04705 a42f939bfeb82c031ee19fb7137a27eb 549 Pfam PF13145 PPIC-type PPIASE domain 250 393 3.7E-7 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 IM40_04705 a42f939bfeb82c031ee19fb7137a27eb 549 Pfam PF13624 SurA N-terminal domain 3 165 4.1E-32 T 14-10-2018 IM40_04705 a42f939bfeb82c031ee19fb7137a27eb 549 SUPERFAMILY SSF109998 45 240 4.71E-22 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily IM40_04705 a42f939bfeb82c031ee19fb7137a27eb 549 Gene3D G3DSA:1.10.4030.30 46 228 2.1E-12 T 14-10-2018 IM40_09915 1ddd2e11c5b608a612c2875d375bd5d3 70 Pfam PF11753 Protein of unknwon function (DUF3310) 1 56 8.1E-16 T 14-10-2018 IPR021739 SaV-like IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 SUPERFAMILY SSF55811 219 344 3.11E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 Pfam PF00633 Helix-hairpin-helix motif 108 129 2.6E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 Gene3D G3DSA:1.10.1670.10 4 210 2.7E-81 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 Gene3D G3DSA:1.10.340.30 18 133 2.7E-81 T 14-10-2018 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 SMART SM00478 40 189 1.0E-44 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 153 7.1E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 267 4.9E-94 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 Gene3D G3DSA:3.90.79.10 223 348 3.6E-15 T 14-10-2018 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 Pfam PF14815 NUDIX domain 234 343 5.1E-20 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 IM40_04290 f87ddb9f7bf6192dcc16493cf351b1e3 355 SUPERFAMILY SSF48150 3 221 3.93E-69 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 SUPERFAMILY SSF47928 2 105 8.89E-20 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 4 175 1.3E-42 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 16.636 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 Gene3D G3DSA:1.10.520.20 4 98 3.3E-18 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 4 175 1.2E-34 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 PRINTS PR00125 ATP synthase delta subunit signature 4 23 4.8E-20 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.8E-20 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.8E-20 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.8E-20 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.8E-20 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05075 637a724daa6663ca257003e4cb7030f2 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_07965 6fb047327ee228b2f2fba6ad5c9ce845 106 SUPERFAMILY SSF81901 10 104 5.36E-19 T 14-10-2018 IM40_07965 6fb047327ee228b2f2fba6ad5c9ce845 106 Pfam PF13181 Tetratricopeptide repeat 61 87 2.8E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_07965 6fb047327ee228b2f2fba6ad5c9ce845 106 SMART SM00671 29 60 5.9 T 14-10-2018 IPR006597 Sel1-like repeat IM40_07965 6fb047327ee228b2f2fba6ad5c9ce845 106 SMART SM00671 61 92 6.3 T 14-10-2018 IPR006597 Sel1-like repeat IM40_07965 6fb047327ee228b2f2fba6ad5c9ce845 106 Gene3D G3DSA:1.25.40.10 2 106 8.8E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 Gene3D G3DSA:1.10.486.10 387 534 5.9E-108 T 14-10-2018 IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 Gene3D G3DSA:3.40.50.300 9 277 9.3E-98 T 14-10-2018 IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 Gene3D G3DSA:3.40.50.300 286 633 5.9E-108 T 14-10-2018 IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 Gene3D G3DSA:1.10.10.160 110 193 9.3E-98 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 Pfam PF13361 UvrD-like helicase C-terminal domain 282 612 1.4E-62 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 277 1.5E-76 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 IM40_03525 2a6afa76c8dc90ba99969a5acd10090c 726 SUPERFAMILY SSF52540 4 639 4.57E-176 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07645 c94026711059fe1055112c883dfe44fd 285 Pfam PF05036 Sporulation related domain 195 268 1.7E-5 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 SMART SM00382 188 327 1.7E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 4.1E-238 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 7.3E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Pfam PF06480 FtsH Extracellular 8 95 1.2E-10 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 SUPERFAMILY SSF140990 406 603 3.4E-73 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 612 37.453 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Gene3D G3DSA:3.40.50.300 141 326 5.2E-69 T 14-10-2018 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Gene3D G3DSA:1.20.58.760 401 608 4.6E-77 T 14-10-2018 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Gene3D G3DSA:2.40.50.920 30 105 1.0E-6 T 14-10-2018 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Pfam PF01434 Peptidase family M41 385 595 4.1E-82 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 SUPERFAMILY SSF52540 146 395 1.25E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06400 1dfa983784ebc7ca3ef115132aaac684 633 Gene3D G3DSA:1.10.8.60 327 400 1.9E-30 T 14-10-2018 IM40_06890 83bfcd8fff7181a775d1a221d0e5a33b 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 IM40_06890 83bfcd8fff7181a775d1a221d0e5a33b 249 Gene3D G3DSA:3.40.50.620 1 247 1.3E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06890 83bfcd8fff7181a775d1a221d0e5a33b 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 1.4E-41 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IM40_06890 83bfcd8fff7181a775d1a221d0e5a33b 249 SMART SM00893 23 211 2.6E-61 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IM40_06890 83bfcd8fff7181a775d1a221d0e5a33b 249 PIRSF PIRSF000090 1 249 8.4E-86 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 IM40_06890 83bfcd8fff7181a775d1a221d0e5a33b 249 SUPERFAMILY SSF52402 1 242 8.37E-84 T 14-10-2018 IM40_08975 ef1815db2be2696902638a17ab480b7c 167 Gene3D G3DSA:3.30.160.150 26 167 4.8E-27 T 14-10-2018 IM40_08975 ef1815db2be2696902638a17ab480b7c 167 Pfam PF04390 Lipopolysaccharide-assembly 35 156 3.3E-7 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 IM40_08730 e7701c6fe1c60812ac483a1f595d6b3b 299 Gene3D G3DSA:1.10.10.10 1 88 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08730 e7701c6fe1c60812ac483a1f595d6b3b 299 SUPERFAMILY SSF53850 86 287 1.99E-26 T 14-10-2018 IM40_08730 e7701c6fe1c60812ac483a1f595d6b3b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 1.2E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_08730 e7701c6fe1c60812ac483a1f595d6b3b 299 Pfam PF03466 LysR substrate binding domain 85 283 2.2E-17 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_08730 e7701c6fe1c60812ac483a1f595d6b3b 299 Gene3D G3DSA:3.40.190.290 89 286 4.2E-35 T 14-10-2018 IM40_08730 e7701c6fe1c60812ac483a1f595d6b3b 299 SUPERFAMILY SSF46785 1 109 5.84E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_01750 30d1127c4541ca8d2589b6a534060776 301 Gene3D G3DSA:3.30.300.20 185 299 3.6E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta IM40_01750 30d1127c4541ca8d2589b6a534060776 301 Pfam PF01926 50S ribosome-binding GTPase 10 124 1.9E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 Gene3D G3DSA:3.40.50.300 2 184 8.0E-45 T 14-10-2018 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 SUPERFAMILY SSF52540 10 203 2.07E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01750 30d1127c4541ca8d2589b6a534060776 301 Hamap MF_00367 GTPase Era [era]. 5 295 32.713 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 278 1.4E-76 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 Pfam PF07650 KH domain 207 283 1.1E-15 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 SUPERFAMILY SSF54814 180 296 3.92E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 164 4.7E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 3.0E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_01750 30d1127c4541ca8d2589b6a534060776 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 59 74 3.0E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_03455 364844a6557f04e9ee81e12551dffde4 165 Pfam PF07811 TadE-like protein 21 63 2.3E-10 T 14-10-2018 IPR012495 TadE-like IM40_04915 87e94e610cfc9459252053586137fd49 183 Gene3D G3DSA:3.30.1380.10 75 183 4.3E-12 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IM40_04915 87e94e610cfc9459252053586137fd49 183 SUPERFAMILY SSF55166 67 176 9.42E-25 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IM40_04915 87e94e610cfc9459252053586137fd49 183 Pfam PF05951 Bacterial protein of unknown function (DUF882) 37 176 7.1E-45 T 14-10-2018 IPR010275 Protein of unknown function DUF882 IM40_02845 16c4baaba744b132a17800d502f47607 379 Pfam PF01098 Cell cycle protein 23 371 2.1E-79 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_02845 16c4baaba744b132a17800d502f47607 379 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 21 371 2.0E-105 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF52777 1320 1536 2.89E-26 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF52777 1738 1971 4.52E-41 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.40.50.12780 508 919 1.1E-122 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Pfam PF00550 Phosphopantetheine attachment site 1046 1107 2.1E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF52777 1130 1288 2.72E-22 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF52777 1560 1734 4.45E-41 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 ProSitePatterns PS00455 Putative AMP-binding domain signature. 658 669 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.559.10 58 427 5.4E-130 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.300.30 921 1030 4.9E-25 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Pfam PF00501 AMP-binding enzyme 518 927 7.2E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF47336 1038 1107 1.57E-14 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF52777 59 237 3.25E-44 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.559.30 1736 1970 6.2E-93 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Pfam PF00668 Condensation domain 1558 1971 8.0E-73 T 14-10-2018 IPR001242 Condensation domain IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Pfam PF00668 Condensation domain 1128 1536 1.5E-45 T 14-10-2018 IPR001242 Condensation domain IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Pfam PF00668 Condensation domain 57 498 8.5E-105 T 14-10-2018 IPR001242 Condensation domain IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.559.30 241 481 5.4E-130 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 951 4.3E-120 T 14-10-2018 IPR010071 Amino acid adenylation domain IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Pfam PF13193 AMP-binding enzyme C-terminal domain 939 1015 3.6E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:1.10.1200.10 1037 1107 1.7E-18 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.559.30 1309 1540 6.8E-30 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.559.10 1560 1923 6.2E-93 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 Gene3D G3DSA:3.30.559.10 1113 1287 7.0E-27 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF56801 475 1055 6.67E-141 T 14-10-2018 IM40_02420 54c5bdfef513cff0ca942326f6b6142a 1979 SUPERFAMILY SSF52777 241 505 1.22E-58 T 14-10-2018 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 Gene3D G3DSA:1.10.10.10 23 84 1.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 SMART SM00421 22 79 0.009 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 SUPERFAMILY SSF46894 25 79 4.76E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 SUPERFAMILY SSF52540 337 545 4.88E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 Pfam PF00196 Bacterial regulatory proteins, luxR family 26 74 1.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 PRINTS PR00364 Disease resistance protein signature 521 535 1.8E-5 T 14-10-2018 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 PRINTS PR00364 Disease resistance protein signature 369 384 1.8E-5 T 14-10-2018 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 Pfam PF00931 NB-ARC domain 351 530 3.1E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_02635 3bd511c4faf35efc9b9701d8a7d0bded 566 Gene3D G3DSA:3.40.50.300 328 487 3.1E-21 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Gene3D G3DSA:3.30.930.30 1 210 1.3E-42 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Gene3D G3DSA:3.40.50.300 586 797 2.2E-40 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Gene3D G3DSA:2.30.30.940 668 782 2.2E-40 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Gene3D G3DSA:3.40.1360.10 1510 1631 1.0E-7 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Pfam PF03389 MobA/MobL family 106 228 7.9E-22 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Pfam PF03389 MobA/MobL family 11 72 2.1E-14 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 SUPERFAMILY SSF52540 548 833 4.51E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Gene3D G3DSA:3.40.50.300 394 585 2.2E-40 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Pfam PF13604 AAA domain 407 618 2.3E-37 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 SUPERFAMILY SSF52540 347 564 5.28E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Gene3D G3DSA:3.90.580.10 1298 1386 2.1E-5 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 SUPERFAMILY SSF57783 1328 1381 1.09E-6 T 14-10-2018 IM40_11045 a466c2c7ba726d6b5188696ddb3a76df 1761 Pfam PF13362 Toprim domain 1523 1619 6.3E-15 T 14-10-2018 IPR006171 TOPRIM domain IM40_07710 720f416668d4dc86a326508895174ea3 347 Gene3D G3DSA:3.40.1390.10 4 113 1.7E-14 T 14-10-2018 IM40_07710 720f416668d4dc86a326508895174ea3 347 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 39 104 5.6E-16 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 IM40_07710 720f416668d4dc86a326508895174ea3 347 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 17 340 32.796 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 IM40_07710 720f416668d4dc86a326508895174ea3 347 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 31 343 9.0E-102 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 IM40_07710 720f416668d4dc86a326508895174ea3 347 SUPERFAMILY SSF51161 47 331 1.33E-71 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily IM40_07710 720f416668d4dc86a326508895174ea3 347 Gene3D G3DSA:2.160.10.10 118 323 9.5E-58 T 14-10-2018 IM40_07710 720f416668d4dc86a326508895174ea3 347 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 273 306 6.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_07710 720f416668d4dc86a326508895174ea3 347 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 143 177 3.9E-11 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_07710 720f416668d4dc86a326508895174ea3 347 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 237 272 3.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Pfam PF00009 Elongation factor Tu GTP binding domain 3 193 2.2E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Gene3D G3DSA:3.30.70.240 388 482 2.1E-132 T 14-10-2018 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 SUPERFAMILY SSF50447 150 297 4.57E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 SUPERFAMILY SSF52540 3 204 1.17E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Gene3D G3DSA:3.30.70.870 305 590 2.1E-132 T 14-10-2018 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Pfam PF00679 Elongation factor G C-terminus 398 482 3.9E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 SUPERFAMILY SSF54980 399 513 1.2E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 143 1.3E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 PRINTS PR00315 GTP-binding elongation factor signature 85 96 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 PRINTS PR00315 GTP-binding elongation factor signature 121 130 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 PRINTS PR00315 GTP-binding elongation factor signature 69 79 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Gene3D G3DSA:2.40.30.10 197 298 3.8E-31 T 14-10-2018 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 SUPERFAMILY SSF54980 301 386 2.54E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 599 1.0E-285 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Gene3D G3DSA:3.40.50.300 2 196 4.4E-63 T 14-10-2018 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Gene3D G3DSA:2.40.50.250 483 599 2.1E-132 T 14-10-2018 IM40_05415 0f6554fd73dd6c55d1d553e09a064f2d 606 Pfam PF03144 Elongation factor Tu domain 2 217 288 2.6E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IM40_09615 3f4fc29011cf8fc71039f1cb01fedb2e 94 Pfam PF13384 Homeodomain-like domain 9 56 8.5E-9 T 14-10-2018 IM40_01785 ac62d5c8dc1c1bc7409c028da936872f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.4E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 IM40_01785 ac62d5c8dc1c1bc7409c028da936872f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.8E-34 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 IM40_01785 ac62d5c8dc1c1bc7409c028da936872f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.363 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 IM40_01785 ac62d5c8dc1c1bc7409c028da936872f 72 SUPERFAMILY SSF50249 1 70 8.57E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_01785 ac62d5c8dc1c1bc7409c028da936872f 72 Gene3D G3DSA:2.40.50.140 1 72 1.7E-35 T 14-10-2018 IM40_01785 ac62d5c8dc1c1bc7409c028da936872f 72 SMART SM00316 4 72 5.5E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 IM40_03700 e120f0825ecdc498ee940540c3dabc07 121 Gene3D G3DSA:3.30.70.330 1 117 4.8E-30 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IM40_03700 e120f0825ecdc498ee940540c3dabc07 121 SMART SM00360 4 77 3.0E-27 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 IM40_03700 e120f0825ecdc498ee940540c3dabc07 121 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 75 1.4E-23 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 IM40_03700 e120f0825ecdc498ee940540c3dabc07 121 SUPERFAMILY SSF54928 4 113 2.93E-32 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 SMART SM00411 1 89 1.0E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 SUPERFAMILY SSF47729 1 89 2.65E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_06285 60134ad28c685f64636bee3f68cf5482 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.7E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Pfam PF02938 GAD domain 315 406 8.9E-19 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Pfam PF01336 OB-fold nucleic acid binding domain 21 102 2.3E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 586 5.7E-191 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 SUPERFAMILY SSF55681 116 586 1.13E-98 T 14-10-2018 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Gene3D G3DSA:3.30.1360.30 279 422 1.1E-171 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 1.9E-93 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 9.2E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 9.2E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 9.2E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 9.2E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 SUPERFAMILY SSF50249 4 103 6.29E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_04610 015c822685c99eb0249f3d6d821d428e 595 SUPERFAMILY SSF55261 296 422 8.67E-34 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 587 30.908 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Gene3D G3DSA:3.30.930.10 122 585 1.1E-171 T 14-10-2018 IM40_04610 015c822685c99eb0249f3d6d821d428e 595 Gene3D G3DSA:2.40.50.140 1 105 1.5E-33 T 14-10-2018 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 Gene3D G3DSA:1.25.40.10 147 311 1.6E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SUPERFAMILY SSF48452 317 425 1.52E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 Gene3D G3DSA:1.25.40.10 312 428 1.5E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SUPERFAMILY SSF48452 109 221 5.01E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 Pfam PF13424 Tetratricopeptide repeat 232 297 2.9E-7 T 14-10-2018 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 Pfam PF13424 Tetratricopeptide repeat 149 220 2.1E-9 T 14-10-2018 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SMART SM00028 148 181 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SMART SM00028 316 349 2.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SMART SM00028 190 223 0.071 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SMART SM00028 232 265 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_02640 6ab1658353c40b6eefb567e5a204cbe9 468 SUPERFAMILY SSF48452 184 309 2.6E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_06785 94ccbe94ac99baf10fa669644a786c2f 411 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 273 374 5.0E-42 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 IM40_06785 94ccbe94ac99baf10fa669644a786c2f 411 Pfam PF00033 Cytochrome b/b6/petB 30 217 1.7E-81 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 IM40_06785 94ccbe94ac99baf10fa669644a786c2f 411 SUPERFAMILY SSF81648 276 395 2.01E-42 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 IM40_06785 94ccbe94ac99baf10fa669644a786c2f 411 Gene3D G3DSA:1.20.810.10 3 407 6.1E-173 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 IM40_06785 94ccbe94ac99baf10fa669644a786c2f 411 SUPERFAMILY SSF81342 18 275 6.91E-116 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 IM40_06785 94ccbe94ac99baf10fa669644a786c2f 411 PIRSF PIRSF038885 3 404 8.2E-203 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 IM40_00465 b4ae67e8a3bff3b77956574a54697042 451 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 451 3.7E-86 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IM40_00465 b4ae67e8a3bff3b77956574a54697042 451 Gene3D G3DSA:2.40.160.60 24 451 9.9E-120 T 14-10-2018 IM40_00465 b4ae67e8a3bff3b77956574a54697042 451 SUPERFAMILY SSF56935 31 451 4.76E-74 T 14-10-2018 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 SUPERFAMILY SSF52540 191 503 1.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 207 222 3.8E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 287 301 3.8E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 328 3.8E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 339 351 3.8E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 500 6.4E-164 T 14-10-2018 IPR004482 Mg chelatase-related protein IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 139 1.2E-41 T 14-10-2018 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 SMART SM00382 208 390 9.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 391 3.9E-95 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 Gene3D G3DSA:3.40.50.300 188 505 1.9E-63 T 14-10-2018 IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 Gene3D G3DSA:3.30.230.10 15 167 5.3E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 SUPERFAMILY SSF54211 7 168 7.97E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_09175 dfa4080ddaf51cfed205a82bd2827eb3 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 500 3.9E-28 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain IM40_08365 6071c3a0fabfde370dfc5c9c2d9d467e 279 Pfam PF11019 Protein of unknown function (DUF2608) 122 262 3.2E-6 T 14-10-2018 IPR022565 Protein of unknown function DUF2608 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Gene3D G3DSA:1.20.1270.10 493 587 2.0E-19 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 SUPERFAMILY SSF100920 356 510 5.23E-48 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Gene3D G3DSA:3.30.420.40 179 338 2.4E-102 T 14-10-2018 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 133 153 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 358 377 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 21 34 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 439 455 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 192 202 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 305 321 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 336 356 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 PRINTS PR00301 70kDa heat shock protein signature 49 61 9.4E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Gene3D G3DSA:2.60.34.10 353 491 4.5E-47 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Gene3D G3DSA:3.90.640.10 218 280 2.4E-102 T 14-10-2018 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 SUPERFAMILY SSF53067 21 178 6.85E-48 T 14-10-2018 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 SUPERFAMILY SSF53067 182 352 5.64E-45 T 14-10-2018 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 25 32 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Gene3D G3DSA:3.30.420.40 23 348 2.4E-102 T 14-10-2018 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 186 199 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Pfam PF00012 Hsp70 protein 102 569 2.1E-139 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 Pfam PF00012 Hsp70 protein 22 93 6.2E-11 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 SUPERFAMILY SSF100934 477 587 5.49E-24 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IM40_05720 b0eeb886092fb9c15007a395c1ff6dd1 589 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 22 586 3.6E-216 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 4 178 25.365 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 Pfam PF00467 KOW motif 128 158 2.0E-5 T 14-10-2018 IPR005824 KOW IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 7 178 1.3E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 161 170 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 Pfam PF02357 Transcription termination factor nusG 6 109 8.9E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 SUPERFAMILY SSF82679 5 114 9.55E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 PRINTS PR00338 Transcription termination factor NUSG signature 59 71 8.1E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 PRINTS PR00338 Transcription termination factor NUSG signature 136 151 8.1E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 PRINTS PR00338 Transcription termination factor NUSG signature 154 170 8.1E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 Gene3D G3DSA:3.30.70.940 2 118 6.7E-45 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 SUPERFAMILY SSF50104 122 178 3.31E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 SMART SM00738 4 112 5.3E-44 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 SMART SM00739 124 151 5.8E-5 T 14-10-2018 IPR005824 KOW IM40_06240 359e83d07b10e4b60f3d479a2ae2f5b1 178 Gene3D G3DSA:2.30.30.30 119 178 1.3E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 IM40_10190 ee6139d072033a3d81a82547cf8f4970 324 Pfam PF01548 Transposase 7 154 6.4E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_10190 ee6139d072033a3d81a82547cf8f4970 324 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 278 3.5E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 SUPERFAMILY SSF68912 1 45 2.16E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Gene3D G3DSA:1.10.720.10 1 45 2.5E-15 T 14-10-2018 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 4.1E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 SMART SM00357 52 118 5.3E-13 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Gene3D G3DSA:3.40.50.300 130 417 2.5E-127 T 14-10-2018 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 SMART SM00382 170 355 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 8.7E-213 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 363 2.0E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 SUPERFAMILY SSF50249 49 125 7.42E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Gene3D G3DSA:2.40.50.140 48 123 2.5E-32 T 14-10-2018 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Pfam PF07497 Rho termination factor, RNA-binding domain 53 125 2.4E-30 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 SMART SM00959 5 47 2.9E-16 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 SUPERFAMILY SSF52540 90 371 3.39E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09020 1deeaa9d29c195e71f323aa48d021e29 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 243.097 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 6 360 9.7E-55 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 ProSitePatterns PS00618 RecF protein signature 2. 315 333 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 SUPERFAMILY SSF52540 6 367 9.94E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 Gene3D G3DSA:3.40.50.300 9 350 5.5E-76 T 14-10-2018 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 Gene3D G3DSA:1.20.1050.90 128 314 5.5E-76 T 14-10-2018 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 ProSitePatterns PS00617 RecF protein signature 1. 125 145 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 375 77.413 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 IM40_00015 8df17ab0f737fd39c650c84ddf202e8f 375 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 364 1.6E-19 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal IM40_07170 47c945bd10f590a90d73909def9d3a30 412 Gene3D G3DSA:3.30.70.260 260 334 5.3E-33 T 14-10-2018 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 SUPERFAMILY SSF55021 322 404 3.89E-15 T 14-10-2018 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 PIRSF PIRSF000726 54 406 3.0E-101 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 PIRSF PIRSF000726 1 60 1.9E-15 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 SUPERFAMILY SSF55021 250 343 5.5E-9 T 14-10-2018 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 397 1.2E-95 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 Gene3D G3DSA:3.30.70.260 254 399 5.3E-33 T 14-10-2018 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IM40_07170 47c945bd10f590a90d73909def9d3a30 412 Pfam PF13840 ACT domain 333 394 1.7E-9 T 14-10-2018 IPR027795 CASTOR, ACT domain IM40_07170 47c945bd10f590a90d73909def9d3a30 412 Gene3D G3DSA:3.40.1160.10 1 252 7.1E-83 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IM40_07170 47c945bd10f590a90d73909def9d3a30 412 SUPERFAMILY SSF53633 4 243 7.72E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IM40_07170 47c945bd10f590a90d73909def9d3a30 412 Pfam PF00696 Amino acid kinase family 3 230 1.2E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 IM40_10500 be2aede2f1f654c31c441c40cc542bde 91 SUPERFAMILY SSF143011 6 89 1.12E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_10500 be2aede2f1f654c31c441c40cc542bde 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 90 2.1E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_10500 be2aede2f1f654c31c441c40cc542bde 91 Gene3D G3DSA:3.30.2310.20 5 91 1.5E-32 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_10500 be2aede2f1f654c31c441c40cc542bde 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 8 90 7.6E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR01159 DNA gyrase subunit B signature 489 498 8.3E-8 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR01159 DNA gyrase subunit B signature 16 26 8.3E-8 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR01159 DNA gyrase subunit B signature 607 619 8.3E-8 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR01159 DNA gyrase subunit B signature 394 414 8.3E-8 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 14 656 6.3E-226 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Gene3D G3DSA:3.40.50.670 418 665 1.1E-85 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 186 6.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_00505 659a8999e2de737a345dffff3a9e6773 665 SMART SM00387 41 187 7.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Gene3D G3DSA:3.30.565.10 12 222 2.7E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00505 659a8999e2de737a345dffff3a9e6773 665 SUPERFAMILY SSF56719 415 655 1.23E-73 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 ProSitePatterns PS00177 DNA topoisomerase II signature. 441 449 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Gene3D G3DSA:3.30.230.10 241 415 3.3E-44 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 582 654 5.0E-21 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Pfam PF01751 Toprim domain 438 546 8.2E-16 T 14-10-2018 IPR006171 TOPRIM domain IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Pfam PF00204 DNA gyrase B 241 410 6.5E-41 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 505 521 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 439 453 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 45 60 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 290 303 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 523 540 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 80 93 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 586 602 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 PRINTS PR00418 DNA topoisomerase II family signature 543 555 1.4E-61 T 14-10-2018 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 SUPERFAMILY SSF55874 16 218 3.67E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_00505 659a8999e2de737a345dffff3a9e6773 665 SUPERFAMILY SSF54211 241 410 7.97E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_00505 659a8999e2de737a345dffff3a9e6773 665 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 13 662 41.174 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IM40_00505 659a8999e2de737a345dffff3a9e6773 665 SMART SM00433 45 658 6.8E-263 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 1.4E-100 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 SUPERFAMILY SSF52374 3 299 5.36E-110 T 14-10-2018 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 31.531 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 1.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 1.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 Gene3D G3DSA:3.40.50.620 1 315 1.7E-131 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 Gene3D G3DSA:1.10.10.350 368 465 3.3E-26 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 SUPERFAMILY SSF48163 300 465 1.27E-37 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_05475 3ebed2092d5c895afdce6b7a0e06f265 466 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 464 4.9E-165 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IM40_08750 af577b998cd21fd9845b949c847f7984 192 SUPERFAMILY SSF53697 5 186 1.38E-47 T 14-10-2018 IM40_08750 af577b998cd21fd9845b949c847f7984 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 189 33.409 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 IM40_08750 af577b998cd21fd9845b949c847f7984 192 Pfam PF13580 SIS domain 19 146 4.6E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IM40_08750 af577b998cd21fd9845b949c847f7984 192 Gene3D G3DSA:3.40.50.10490 3 192 1.6E-64 T 14-10-2018 IM40_02100 5f4b8e58b145d4d373968e25dc4376c5 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 117 4.3E-41 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02100 5f4b8e58b145d4d373968e25dc4376c5 117 Gene3D G3DSA:3.30.420.100 3 117 2.6E-42 T 14-10-2018 IM40_02100 5f4b8e58b145d4d373968e25dc4376c5 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 117 27.372 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02100 5f4b8e58b145d4d373968e25dc4376c5 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 117 4.6E-42 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02100 5f4b8e58b145d4d373968e25dc4376c5 117 SUPERFAMILY SSF53137 8 115 4.58E-47 T 14-10-2018 IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 Gene3D G3DSA:3.40.50.300 692 891 1.1E-17 T 14-10-2018 IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 Gene3D G3DSA:2.30.30.940 754 845 1.1E-17 T 14-10-2018 IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 Gene3D G3DSA:3.30.930.30 2 209 8.8E-48 T 14-10-2018 IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 SUPERFAMILY SSF52540 379 516 7.39E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 Gene3D G3DSA:3.40.50.300 338 547 2.1E-40 T 14-10-2018 IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 Pfam PF13604 AAA domain 383 568 1.7E-53 T 14-10-2018 IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 SUPERFAMILY SSF52540 489 892 2.01E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08250 2f9fa14d0c8560fbd3d602411399b122 1150 Pfam PF03389 MobA/MobL family 17 229 1.1E-36 T 14-10-2018 IPR005053 MobA/MobL protein IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 13 26 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 181 4.1E-57 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 Pfam PF01195 Peptidyl-tRNA hydrolase 2 182 2.7E-55 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 Gene3D G3DSA:3.40.50.1470 1 185 3.2E-65 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 SUPERFAMILY SSF53178 1 182 3.4E-65 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 176 32.913 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 IM40_05535 3fc3cdc36cbc30db46769e2a90bbc403 187 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 106 116 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 IM40_08660 3cbe40d6b85b225e31daaf6ca3d394bc 401 Gene3D G3DSA:3.90.1150.10 26 392 4.0E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_08660 3cbe40d6b85b225e31daaf6ca3d394bc 401 Gene3D G3DSA:3.40.640.10 63 286 4.0E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_08660 3cbe40d6b85b225e31daaf6ca3d394bc 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 IM40_08660 3cbe40d6b85b225e31daaf6ca3d394bc 401 Pfam PF00155 Aminotransferase class I and II 32 392 2.2E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IM40_08660 3cbe40d6b85b225e31daaf6ca3d394bc 401 SUPERFAMILY SSF53383 1 398 2.29E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_04180 fc5601fe6299f37ec0585be8a0b1e6a4 107 SUPERFAMILY SSF82607 8 101 2.35E-31 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IM40_04180 fc5601fe6299f37ec0585be8a0b1e6a4 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 1.4E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IM40_04180 fc5601fe6299f37ec0585be8a0b1e6a4 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.737 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IM40_04180 fc5601fe6299f37ec0585be8a0b1e6a4 107 Gene3D G3DSA:3.30.1310.10 1 107 2.0E-38 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IM40_04180 fc5601fe6299f37ec0585be8a0b1e6a4 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 1.3E-25 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IM40_04180 fc5601fe6299f37ec0585be8a0b1e6a4 107 PIRSF PIRSF004555 1 106 4.2E-37 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IM40_10180 195fe85c5dbacd9cdc641b4792b31941 140 Gene3D G3DSA:2.10.109.10 26 139 5.8E-36 T 14-10-2018 IM40_10180 195fe85c5dbacd9cdc641b4792b31941 140 SUPERFAMILY SSF51306 15 138 9.24E-26 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_10180 195fe85c5dbacd9cdc641b4792b31941 140 Pfam PF00717 Peptidase S24-like 58 116 5.5E-7 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_07470 bb586a6886e796413bb96a771039431b 585 Pfam PF00750 tRNA synthetases class I (R) 109 455 1.1E-81 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 SUPERFAMILY SSF47323 464 585 5.3E-25 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_07470 bb586a6886e796413bb96a771039431b 585 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 84 1.6E-11 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IM40_07470 bb586a6886e796413bb96a771039431b 585 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 585 1.2E-117 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 SUPERFAMILY SSF52374 113 462 8.04E-72 T 14-10-2018 IM40_07470 bb586a6886e796413bb96a771039431b 585 Gene3D G3DSA:1.10.730.10 464 585 7.5E-23 T 14-10-2018 IM40_07470 bb586a6886e796413bb96a771039431b 585 SMART SM00836 470 585 2.3E-25 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 IM40_07470 bb586a6886e796413bb96a771039431b 585 Gene3D G3DSA:3.30.1360.70 2 105 5.0E-12 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 SUPERFAMILY SSF55190 6 94 5.89E-9 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 312 333 9.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_07470 bb586a6886e796413bb96a771039431b 585 Gene3D G3DSA:3.40.50.620 110 463 1.7E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_07470 bb586a6886e796413bb96a771039431b 585 SMART SM01016 2 86 2.2E-10 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IM40_07470 bb586a6886e796413bb96a771039431b 585 Pfam PF05746 DALR anticodon binding domain 470 585 1.8E-22 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 Pfam PF00263 Bacterial type II and III secretion system protein 409 559 6.1E-27 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 Gene3D G3DSA:1.25.40.10 156 240 1.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 Gene3D G3DSA:1.25.40.10 31 155 8.2E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 SUPERFAMILY SSF48452 52 224 2.53E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 SMART SM00028 124 157 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 SMART SM00028 50 83 74.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_02925 60fce7bdaffef6d4cee4f225185769a3 643 SMART SM00028 158 191 71.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09030 a105c58dd53e223613258e854d7c3236 336 Gene3D G3DSA:3.40.50.1400 157 292 2.2E-96 T 14-10-2018 IM40_09030 a105c58dd53e223613258e854d7c3236 336 ProSitePatterns PS00534 Ferrochelatase signature. 183 201 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IM40_09030 a105c58dd53e223613258e854d7c3236 336 Hamap MF_00323 Ferrochelatase [hemH]. 2 311 31.629 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IM40_09030 a105c58dd53e223613258e854d7c3236 336 SUPERFAMILY SSF53800 1 315 9.16E-89 T 14-10-2018 IM40_09030 a105c58dd53e223613258e854d7c3236 336 Gene3D G3DSA:3.40.50.1400 4 311 2.2E-96 T 14-10-2018 IM40_09030 a105c58dd53e223613258e854d7c3236 336 Pfam PF00762 Ferrochelatase 4 310 1.9E-97 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IM40_09030 a105c58dd53e223613258e854d7c3236 336 TIGRFAM TIGR00109 hemH: ferrochelatase 2 311 3.0E-82 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Pfam PF00668 Condensation domain 15 456 9.8E-81 T 14-10-2018 IPR001242 Condensation domain IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Gene3D G3DSA:1.10.1200.10 975 1013 1.8E-7 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 496 899 7.0E-116 T 14-10-2018 IPR010071 Amino acid adenylation domain IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Gene3D G3DSA:3.30.559.10 16 386 1.1E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Gene3D G3DSA:3.30.559.30 198 441 1.1E-97 T 14-10-2018 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Gene3D G3DSA:3.30.300.30 870 974 2.6E-33 T 14-10-2018 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Pfam PF00501 AMP-binding enzyme 475 875 1.1E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 SUPERFAMILY SSF52777 200 440 4.0E-39 T 14-10-2018 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Pfam PF13193 AMP-binding enzyme C-terminal domain 883 959 6.1E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 SUPERFAMILY SSF52777 17 194 4.89E-37 T 14-10-2018 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 Gene3D G3DSA:3.40.50.12780 463 869 3.5E-110 T 14-10-2018 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 SUPERFAMILY SSF56801 467 999 1.1E-134 T 14-10-2018 IM40_02415 a0d8a8206e957441383497837f0a6cfc 1020 ProSitePatterns PS00455 Putative AMP-binding domain signature. 619 630 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 SUPERFAMILY SSF53850 88 291 4.81E-37 T 14-10-2018 IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 Pfam PF03466 LysR substrate binding domain 87 290 8.6E-31 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.2E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 Gene3D G3DSA:3.40.190.290 91 290 1.4E-39 T 14-10-2018 IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 Gene3D G3DSA:1.10.10.10 1 88 1.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_04355 3932a7eff57ed9ddee27ca1d4f2fe84b 297 SUPERFAMILY SSF46785 1 111 7.38E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_01960 f6bf177be16095ec206d365ddbda005a 367 SUPERFAMILY SSF52091 3 90 9.81E-5 T 14-10-2018 IPR036513 STAS domain superfamily IM40_01960 f6bf177be16095ec206d365ddbda005a 367 Pfam PF02405 Permease MlaE 152 360 1.7E-73 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 IM40_01960 f6bf177be16095ec206d365ddbda005a 367 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 136 363 8.6E-73 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IM40_03990 7ef5b9405eee1a976ba4e4793168242a 2233 Pfam PF04830 Possible hemagglutinin (DUF637) 1720 1887 7.9E-8 T 14-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative IM40_05700 28da46449e87132ceb4087b25974a5a6 412 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 10 403 52.38 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 IM40_05700 28da46449e87132ceb4087b25974a5a6 412 Gene3D G3DSA:3.40.640.10 25 269 5.4E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_05700 28da46449e87132ceb4087b25974a5a6 412 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 14 412 2.1E-206 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 IM40_05700 28da46449e87132ceb4087b25974a5a6 412 Pfam PF00266 Aminotransferase class-V 14 376 7.5E-89 T 14-10-2018 IPR000192 Aminotransferase class V domain IM40_05700 28da46449e87132ceb4087b25974a5a6 412 PIRSF PIRSF005572 11 392 8.8E-133 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 IM40_05700 28da46449e87132ceb4087b25974a5a6 412 SUPERFAMILY SSF53383 11 399 2.89E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_05700 28da46449e87132ceb4087b25974a5a6 412 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 204 223 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IM40_05700 28da46449e87132ceb4087b25974a5a6 412 Gene3D G3DSA:3.90.1150.10 14 383 5.4E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 71 26.596 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 Gene3D G3DSA:2.30.170.50 1 73 1.2E-22 T 14-10-2018 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 Pfam PF01197 Ribosomal protein L31 1 68 8.6E-26 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 9.4E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 SUPERFAMILY SSF143800 1 71 9.81E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 PRINTS PR01249 Ribosomal protein L31 signature 49 67 4.1E-12 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.1E-12 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_00445 657bb34c142bb7792c4e8ea86da703fd 74 PRINTS PR01249 Ribosomal protein L31 signature 34 49 4.1E-12 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_05645 1c668d84d809a6e01ab82dd98d8449e5 1049 Pfam PF13502 AsmA-like C-terminal region 812 1009 1.2E-10 T 14-10-2018 IPR032712 AsmA-like, C-terminal IM40_05645 1c668d84d809a6e01ab82dd98d8449e5 1049 Pfam PF13116 Protein of unknown function 370 644 4.5E-23 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 IM40_06180 22b58c768c68e1e1e01c0c39c09d6136 352 Gene3D G3DSA:2.40.10.10 191 273 1.4E-6 T 14-10-2018 IM40_06180 22b58c768c68e1e1e01c0c39c09d6136 352 Gene3D G3DSA:2.40.10.10 274 330 1.4E-6 T 14-10-2018 IM40_06180 22b58c768c68e1e1e01c0c39c09d6136 352 SUPERFAMILY SSF50494 189 330 2.44E-11 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 2.7E-48 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.661 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 7.0E-17 T 14-10-2018 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 SUPERFAMILY SSF74731 3 117 2.35E-49 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 Pfam PF00453 Ribosomal protein L20 3 109 2.1E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 Gene3D G3DSA:1.10.720.90 2 55 1.2E-23 T 14-10-2018 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 Gene3D G3DSA:1.10.1900.20 56 119 1.1E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.1E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.1E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04975 4d8d8a8712465ed988d13761c55d0fd1 120 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.1E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03925 bb8e6fbcefcf1a5c92639c58d8602489 235 Gene3D G3DSA:3.30.1380.10 13 235 3.4E-65 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IM40_03925 bb8e6fbcefcf1a5c92639c58d8602489 235 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 15 233 29.788 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 IM40_03925 bb8e6fbcefcf1a5c92639c58d8602489 235 SUPERFAMILY SSF55166 13 234 5.1E-57 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IM40_03925 bb8e6fbcefcf1a5c92639c58d8602489 235 Pfam PF01427 D-ala-D-ala dipeptidase 164 234 1.8E-16 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 IM40_03925 bb8e6fbcefcf1a5c92639c58d8602489 235 Pfam PF01427 D-ala-D-ala dipeptidase 15 144 3.6E-20 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 IM40_03925 bb8e6fbcefcf1a5c92639c58d8602489 235 PIRSF PIRSF026671 2 235 1.3E-59 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 IM40_07675 f6657bfd8987e3c07754877bba9a41d6 333 SUPERFAMILY SSF103481 75 175 9.81E-14 T 14-10-2018 IM40_07675 f6657bfd8987e3c07754877bba9a41d6 333 SUPERFAMILY SSF103481 224 323 4.71E-10 T 14-10-2018 IM40_07675 f6657bfd8987e3c07754877bba9a41d6 333 Pfam PF00892 EamA-like transporter family 35 172 1.6E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_04435 734ad9b62511e5459f0d1d5ab7089820 246 Pfam PF00005 ABC transporter 21 147 3.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_04435 734ad9b62511e5459f0d1d5ab7089820 246 Gene3D G3DSA:3.40.50.300 1 244 1.2E-56 T 14-10-2018 IM40_04435 734ad9b62511e5459f0d1d5ab7089820 246 SUPERFAMILY SSF52540 3 213 7.31E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04435 734ad9b62511e5459f0d1d5ab7089820 246 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_04435 734ad9b62511e5459f0d1d5ab7089820 246 SMART SM00382 30 198 5.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_08715 26e84fbab8fe31cb95c029a0dfc31e5a 312 Gene3D G3DSA:3.30.2350.10 90 308 3.3E-64 T 14-10-2018 IM40_08715 26e84fbab8fe31cb95c029a0dfc31e5a 312 Pfam PF00849 RNA pseudouridylate synthase 99 245 9.9E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_08715 26e84fbab8fe31cb95c029a0dfc31e5a 312 Gene3D G3DSA:3.10.290.10 3 65 5.6E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IM40_08715 26e84fbab8fe31cb95c029a0dfc31e5a 312 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 305 5.7E-58 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_08715 26e84fbab8fe31cb95c029a0dfc31e5a 312 SUPERFAMILY SSF55120 93 306 1.17E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_07705 5fed027cd3aea2000a3d40b245f5b8f9 184 SUPERFAMILY SSF111384 30 171 1.83E-23 T 14-10-2018 IM40_07705 5fed027cd3aea2000a3d40b245f5b8f9 184 SMART SM00935 15 171 1.1E-26 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 IM40_07705 5fed027cd3aea2000a3d40b245f5b8f9 184 Gene3D G3DSA:3.30.910.20 23 184 1.5E-27 T 14-10-2018 IPR024930 Skp domain superfamily IM40_07705 5fed027cd3aea2000a3d40b245f5b8f9 184 Pfam PF03938 Outer membrane protein (OmpH-like) 18 170 6.7E-25 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 IM40_06665 ff29f969c4460a2e696cd98a811f62c8 232 SUPERFAMILY SSF52317 7 187 9.91E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_06665 ff29f969c4460a2e696cd98a811f62c8 232 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 42 134 7.0E-4 T 14-10-2018 IM40_06665 ff29f969c4460a2e696cd98a811f62c8 232 Gene3D G3DSA:3.40.50.880 1 229 3.5E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_06665 ff29f969c4460a2e696cd98a811f62c8 232 Pfam PF00117 Glutamine amidotransferase class-I 32 180 3.1E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase IM40_02360 e85e8b0c6fbd4583928a21120a1dab41 213 SUPERFAMILY SSF47413 11 64 1.15E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_02360 e85e8b0c6fbd4583928a21120a1dab41 213 Gene3D G3DSA:1.10.260.40 6 93 3.7E-8 T 14-10-2018 IM40_04035 05301969da4b1a867d010d2071efebca 453 SMART SM00840 336 395 1.2E-16 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 453 38.061 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 3.0E-118 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 452 3.3E-156 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 Pfam PF09190 DALR domain 339 395 4.0E-14 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 8.0E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 8.0E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 8.0E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 8.0E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IM40_04035 05301969da4b1a867d010d2071efebca 453 SUPERFAMILY SSF47323 315 452 6.02E-29 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_04035 05301969da4b1a867d010d2071efebca 453 Gene3D G3DSA:1.20.120.640 305 453 4.1E-35 T 14-10-2018 IM40_04035 05301969da4b1a867d010d2071efebca 453 Gene3D G3DSA:3.40.50.620 1 304 8.5E-125 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_04035 05301969da4b1a867d010d2071efebca 453 SUPERFAMILY SSF52374 1 311 1.46E-91 T 14-10-2018 IM40_09705 c7f4a204b2628cf652582a883e6f53f0 129 SUPERFAMILY SSF88723 4 118 2.19E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_09705 c7f4a204b2628cf652582a883e6f53f0 129 Gene3D G3DSA:3.40.50.1010 5 126 1.0E-18 T 14-10-2018 IM40_09705 c7f4a204b2628cf652582a883e6f53f0 129 Pfam PF01850 PIN domain 5 113 3.0E-8 T 14-10-2018 IPR002716 PIN domain IM40_02500 285b56804fef3451589061e7191f29ac 88 Pfam PF01527 Transposase 2 71 1.2E-21 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_02500 285b56804fef3451589061e7191f29ac 88 SUPERFAMILY SSF46689 1 73 1.0E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 Pfam PF01012 Electron transfer flavoprotein domain 4 170 2.9E-41 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 PIRSF PIRSF000089 1 315 6.4E-110 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 191 273 6.4E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 SUPERFAMILY SSF52402 2 172 6.49E-51 T 14-10-2018 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 Gene3D G3DSA:3.40.50.620 2 183 5.0E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 SMART SM00893 3 183 6.6E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 Gene3D G3DSA:3.40.50.1220 186 312 7.0E-59 T 14-10-2018 IM40_06895 bab5d64c3d19903612d1dd51a45f8260 317 SUPERFAMILY SSF52467 188 310 4.5E-49 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 6 462 1.8E-240 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 Gene3D G3DSA:1.10.40.30 409 463 2.5E-29 T 14-10-2018 IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 Pfam PF00206 Lyase 13 343 9.7E-119 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 463 91.035 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 Gene3D G3DSA:1.20.200.10 140 407 1.0E-122 T 14-10-2018 IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 9.5E-36 T 14-10-2018 IPR000362 Fumarate lyase family IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 9.5E-36 T 14-10-2018 IPR000362 Fumarate lyase family IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 9.5E-36 T 14-10-2018 IPR000362 Fumarate lyase family IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 9.5E-36 T 14-10-2018 IPR000362 Fumarate lyase family IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 SUPERFAMILY SSF48557 5 464 2.36E-160 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 Pfam PF10415 Fumarase C C-terminus 409 462 6.7E-25 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 Gene3D G3DSA:1.10.275.10 6 139 1.3E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal IM40_03015 31c1b11caf23b9018b77e33fccb30464 466 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 IM40_11420 b959519171fb522ee060921c4184578d 129 Pfam PF01850 PIN domain 5 118 1.2E-10 T 14-10-2018 IPR002716 PIN domain IM40_11420 b959519171fb522ee060921c4184578d 129 SUPERFAMILY SSF88723 4 119 5.33E-17 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_11420 b959519171fb522ee060921c4184578d 129 Gene3D G3DSA:3.40.50.1010 5 126 2.5E-18 T 14-10-2018 IM40_06535 4cd15aae570d4f92fbad8fa7b55cf1ec 209 Pfam PF02660 Glycerol-3-phosphate acyltransferase 21 193 1.2E-47 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 IM40_06535 4cd15aae570d4f92fbad8fa7b55cf1ec 209 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 9 202 1.4E-52 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 IM40_06535 4cd15aae570d4f92fbad8fa7b55cf1ec 209 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 13 202 18.955 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 IM40_06535 4cd15aae570d4f92fbad8fa7b55cf1ec 209 SMART SM01207 16 194 2.3E-73 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 IM40_03025 9cf199b5ec470f16af2382bcea3cf0fc 150 Pfam PF14437 MafB19-like deaminase 5 150 4.9E-30 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 IM40_03025 9cf199b5ec470f16af2382bcea3cf0fc 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 91 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 IM40_03025 9cf199b5ec470f16af2382bcea3cf0fc 150 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 150 43.996 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 IM40_03025 9cf199b5ec470f16af2382bcea3cf0fc 150 SUPERFAMILY SSF53927 7 150 4.75E-49 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 IM40_03025 9cf199b5ec470f16af2382bcea3cf0fc 150 Gene3D G3DSA:3.40.140.10 1 150 1.4E-53 T 14-10-2018 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 Hamap MF_00318 Enolase [eno]. 2 411 43.796 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 SMART SM01192 139 421 4.0E-205 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 SUPERFAMILY SSF54826 3 138 9.07E-56 T 14-10-2018 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 Gene3D G3DSA:3.20.20.120 129 420 5.4E-129 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PRINTS PR00148 Enolase signature 334 348 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PRINTS PR00148 Enolase signature 107 123 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PRINTS PR00148 Enolase signature 161 174 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PRINTS PR00148 Enolase signature 311 322 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PRINTS PR00148 Enolase signature 37 51 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PRINTS PR00148 Enolase signature 363 380 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 418 4.2E-127 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 SUPERFAMILY SSF51604 141 418 3.82E-122 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 PIRSF PIRSF001400 1 420 2.3E-187 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 Pfam PF03952 Enolase, N-terminal domain 4 134 6.0E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 418 9.8E-202 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 Gene3D G3DSA:3.30.390.10 1 127 3.3E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal IM40_05155 2161e77e1b7c36fbea762de5c2029dc3 421 SMART SM01193 4 134 8.8E-93 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_02885 4f4d935a19d6dcb24d18f7488f9ae0dc 183 Pfam PF13302 Acetyltransferase (GNAT) domain 10 151 2.0E-33 T 14-10-2018 IPR000182 GNAT domain IM40_02885 4f4d935a19d6dcb24d18f7488f9ae0dc 183 SUPERFAMILY SSF55729 2 175 2.38E-46 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_02885 4f4d935a19d6dcb24d18f7488f9ae0dc 183 Gene3D G3DSA:3.40.630.30 2 181 2.5E-46 T 14-10-2018 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 SUPERFAMILY SSF50465 304 396 4.03E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Gene3D G3DSA:2.40.30.10 340 395 1.3E-28 T 14-10-2018 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 148 1.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.2E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Gene3D G3DSA:2.40.30.10 208 336 1.8E-51 T 14-10-2018 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.845 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.0E-223 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Gene3D G3DSA:3.40.50.300 1 205 6.9E-70 T 14-10-2018 IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 SUPERFAMILY SSF50447 205 303 2.36E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 SUPERFAMILY SSF52540 9 228 3.85E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02010 8e196b29fdfd4739b48bacd5542533ca 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.3E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 SUPERFAMILY SSF50465 304 396 4.03E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Gene3D G3DSA:2.40.30.10 340 395 1.3E-28 T 14-10-2018 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 148 1.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.2E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Gene3D G3DSA:2.40.30.10 208 336 1.8E-51 T 14-10-2018 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.845 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.0E-223 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Gene3D G3DSA:3.40.50.300 1 205 6.9E-70 T 14-10-2018 IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 SUPERFAMILY SSF50447 205 303 2.36E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 SUPERFAMILY SSF52540 9 228 3.85E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06255 8e196b29fdfd4739b48bacd5542533ca 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.3E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IM40_07590 3330e8bf29838ced49d51c3afe1315cb 290 Gene3D G3DSA:3.40.50.1000 17 248 8.7E-37 T 14-10-2018 IPR023214 HAD superfamily IM40_07590 3330e8bf29838ced49d51c3afe1315cb 290 Gene3D G3DSA:3.40.50.1000 101 200 8.7E-37 T 14-10-2018 IPR023214 HAD superfamily IM40_07590 3330e8bf29838ced49d51c3afe1315cb 290 Pfam PF13242 HAD-hyrolase-like 201 254 1.6E-6 T 14-10-2018 IM40_07590 3330e8bf29838ced49d51c3afe1315cb 290 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 9 247 1.8E-44 T 14-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 IM40_07590 3330e8bf29838ced49d51c3afe1315cb 290 SUPERFAMILY SSF56784 15 288 1.86E-33 T 14-10-2018 IPR036412 HAD-like superfamily IM40_07590 3330e8bf29838ced49d51c3afe1315cb 290 Pfam PF13344 Haloacid dehalogenase-like hydrolase 18 146 5.4E-10 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA IM40_03655 2967dae40345fcb13d238088ddf3d4c3 298 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 15 298 27.861 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 IM40_03655 2967dae40345fcb13d238088ddf3d4c3 298 Pfam PF01040 UbiA prenyltransferase family 39 284 7.7E-57 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 IM40_03655 2967dae40345fcb13d238088ddf3d4c3 298 Gene3D G3DSA:1.10.357.140 35 179 5.5E-44 T 14-10-2018 IM40_03655 2967dae40345fcb13d238088ddf3d4c3 298 Gene3D G3DSA:1.20.120.1780 180 297 2.3E-16 T 14-10-2018 IM40_03655 2967dae40345fcb13d238088ddf3d4c3 298 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 21 296 1.8E-101 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 IM40_03655 2967dae40345fcb13d238088ddf3d4c3 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 77 99 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 329 4.0E-100 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 Pfam PF00579 tRNA synthetases class I (W and Y) 3 284 4.9E-77 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 SUPERFAMILY SSF52374 1 329 2.91E-90 T 14-10-2018 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 6.1E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 6.1E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 6.1E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 6.1E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 Gene3D G3DSA:3.40.50.620 4 328 3.6E-130 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 Gene3D G3DSA:1.10.240.10 187 299 3.6E-130 T 14-10-2018 IM40_06965 5975f9a703a2457bec621f6f39232cf0 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 330 38.809 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 PIRSF PIRSF000409 1 355 8.2E-147 T 14-10-2018 IPR016221 Bifunctional regulatory protein Ada IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 347 1.9E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 SMART SM00342 97 178 4.2E-6 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 SUPERFAMILY SSF57884 5 85 2.48E-32 T 14-10-2018 IPR035451 Ada-like domain superfamily IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Gene3D G3DSA:3.30.160.70 185 263 1.8E-11 T 14-10-2018 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Gene3D G3DSA:3.40.10.10 2 74 7.6E-28 T 14-10-2018 IPR035451 Ada-like domain superfamily IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 SUPERFAMILY SSF46767 267 348 8.11E-28 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 318 324 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 SUPERFAMILY SSF53155 187 272 4.51E-15 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Pfam PF02805 Metal binding domain of Ada 10 72 1.7E-28 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Pfam PF12833 Helix-turn-helix domain 108 177 3.5E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 7.3E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Gene3D G3DSA:1.10.10.10 267 353 3.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01560 4b85ffbc1bc1809aa4a0eff24f85f209 355 Gene3D G3DSA:1.10.10.60 82 182 4.2E-11 T 14-10-2018 IM40_05135 8f9002ea66e1daf46b993ec94de05fc4 194 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 194 41.831 T 14-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 IM40_05135 8f9002ea66e1daf46b993ec94de05fc4 194 Gene3D G3DSA:3.40.109.10 2 192 3.7E-26 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_05135 8f9002ea66e1daf46b993ec94de05fc4 194 SUPERFAMILY SSF55469 8 193 3.93E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_05135 8f9002ea66e1daf46b993ec94de05fc4 194 Pfam PF00881 Nitroreductase family 15 172 1.7E-10 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IM40_05670 eb8be2ed6ba4031a233d50d38e47b578 218 SUPERFAMILY SSF53474 4 209 1.4E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_05670 eb8be2ed6ba4031a233d50d38e47b578 218 Gene3D G3DSA:3.40.50.1820 2 213 5.6E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_05670 eb8be2ed6ba4031a233d50d38e47b578 218 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 40 142 5.0E-11 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 IM40_01250 4bdb69449d6359d2fe299c42e65b3b9c 151 Pfam PF04364 DNA polymerase III chi subunit, HolC 3 134 6.0E-31 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 IM40_01250 4bdb69449d6359d2fe299c42e65b3b9c 151 Gene3D G3DSA:3.40.50.10110 1 138 2.4E-24 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily IM40_01250 4bdb69449d6359d2fe299c42e65b3b9c 151 SUPERFAMILY SSF102400 3 139 2.22E-31 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily IM40_07430 39326e76cc8927f1c310141f2f01b55e 212 Gene3D G3DSA:3.10.450.50 42 171 5.8E-32 T 14-10-2018 IM40_07430 39326e76cc8927f1c310141f2f01b55e 212 Pfam PF05494 MlaC protein 41 199 1.9E-40 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC IM40_07430 39326e76cc8927f1c310141f2f01b55e 212 Gene3D G3DSA:1.10.10.640 72 198 5.8E-32 T 14-10-2018 IM40_05185 374ca6196e711565278d7d4cc81d3d30 220 SUPERFAMILY SSF53474 3 178 5.73E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_05185 374ca6196e711565278d7d4cc81d3d30 220 Gene3D G3DSA:3.40.50.1820 1 209 2.5E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_05185 374ca6196e711565278d7d4cc81d3d30 220 Pfam PF12740 Chlorophyllase enzyme 4 92 6.0E-9 T 14-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 IM40_03900 fc6484469adc613a9e0aaa0daa42f0d9 203 Gene3D G3DSA:3.40.190.290 1 183 1.7E-34 T 14-10-2018 IM40_03900 fc6484469adc613a9e0aaa0daa42f0d9 203 Pfam PF03466 LysR substrate binding domain 2 183 2.0E-23 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_03900 fc6484469adc613a9e0aaa0daa42f0d9 203 SUPERFAMILY SSF53850 2 186 1.85E-28 T 14-10-2018 IM40_02105 ee912db3e3be00d35938be343f70fef0 182 Gene3D G3DSA:3.30.230.10 78 170 2.4E-33 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_02105 ee912db3e3be00d35938be343f70fef0 182 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 160 4.8E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 IM40_02105 ee912db3e3be00d35938be343f70fef0 182 Gene3D G3DSA:3.30.160.20 4 74 1.9E-29 T 14-10-2018 IM40_02105 ee912db3e3be00d35938be343f70fef0 182 SUPERFAMILY SSF54768 12 78 2.2E-22 T 14-10-2018 IM40_02105 ee912db3e3be00d35938be343f70fef0 182 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site IM40_02105 ee912db3e3be00d35938be343f70fef0 182 SUPERFAMILY SSF54211 82 162 4.8E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_02105 ee912db3e3be00d35938be343f70fef0 182 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 7.6E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 IM40_02105 ee912db3e3be00d35938be343f70fef0 182 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 35.511 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 IM40_02105 ee912db3e3be00d35938be343f70fef0 182 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 3.6E-63 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 PIRSF PIRSF039072 1 471 7.3E-284 T 14-10-2018 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 343 352 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 SUPERFAMILY SSF50615 4 77 6.02E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 SUPERFAMILY SSF52540 80 357 1.4E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 Gene3D G3DSA:2.40.10.170 1 78 1.5E-32 T 14-10-2018 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 352 1.0E-62 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 Gene3D G3DSA:3.40.50.300 79 354 1.4E-119 T 14-10-2018 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 Hamap MF_01347 ATP synthase subunit beta [atpB]. 5 470 57.484 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 7 468 1.2E-254 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 Gene3D G3DSA:1.10.1140.10 355 471 1.9E-56 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 SUPERFAMILY SSF47917 355 468 1.33E-52 T 14-10-2018 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 76 1.6E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05090 1d1a8e4d1254f62ae45406c2da5bf1ea 471 SMART SM00382 145 391 5.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_07690 f75d3cca037a307ff83500158673aa9c 260 SUPERFAMILY SSF51735 3 259 3.58E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_07690 f75d3cca037a307ff83500158673aa9c 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 260 8.3E-105 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.5E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.5E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.5E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 Gene3D G3DSA:3.40.50.720 1 260 2.0E-79 T 14-10-2018 IM40_07690 f75d3cca037a307ff83500158673aa9c 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IM40_07690 f75d3cca037a307ff83500158673aa9c 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 258 2.7E-53 T 14-10-2018 IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 5.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_07690 f75d3cca037a307ff83500158673aa9c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04585 52e2e8366a632e3a4e923c9dcf1c1058 265 Gene3D G3DSA:3.40.50.300 1 261 1.3E-53 T 14-10-2018 IM40_04585 52e2e8366a632e3a4e923c9dcf1c1058 265 SUPERFAMILY SSF52540 2 230 1.7E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04585 52e2e8366a632e3a4e923c9dcf1c1058 265 Pfam PF00005 ABC transporter 22 177 6.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_04585 52e2e8366a632e3a4e923c9dcf1c1058 265 SMART SM00382 31 225 4.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04585 52e2e8366a632e3a4e923c9dcf1c1058 265 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 Pfam PF00108 Thiolase, N-terminal domain 7 249 5.1E-65 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 Gene3D G3DSA:3.40.47.10 7 262 3.7E-140 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 Gene3D G3DSA:3.40.47.10 129 376 3.7E-140 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 ProSitePatterns PS00737 Thiolases signature 2. 325 341 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 SUPERFAMILY SSF53901 2 253 2.78E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 377 2.5E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 SUPERFAMILY SSF53901 259 377 3.04E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 Pfam PF02803 Thiolase, C-terminal domain 258 377 7.2E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IM40_00475 eb1ea76c4fce169004886a93129e3eb5 380 PIRSF PIRSF000429 1 380 4.8E-127 T 14-10-2018 IPR002155 Thiolase GO:0016747 IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 Gene3D G3DSA:3.30.70.250 130 202 1.1E-91 T 14-10-2018 IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 PIRSF PIRSF000446 1 313 9.8E-99 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 294 3.3E-98 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 305 9.1E-35 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 Gene3D G3DSA:3.40.366.10 6 288 1.1E-91 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 Pfam PF00698 Acyl transferase domain 6 282 4.5E-36 T 14-10-2018 IPR014043 Acyl transferase IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 SUPERFAMILY SSF55048 131 200 1.7E-17 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IM40_01145 84ae4354b3de396b99d2c97115fe18be 313 SUPERFAMILY SSF52151 4 311 1.83E-69 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_06005 0929969deb4ab765151f812f42c4a5ae 232 Gene3D G3DSA:3.40.225.10 1 231 8.8E-66 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily IM40_06005 0929969deb4ab765151f812f42c4a5ae 232 SUPERFAMILY SSF53639 2 202 1.12E-56 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily IM40_06005 0929969deb4ab765151f812f42c4a5ae 232 SMART SM01007 5 184 3.2E-48 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal IM40_06005 0929969deb4ab765151f812f42c4a5ae 232 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 6 183 1.2E-42 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal IM40_00590 5f1c149861c82a24ab9a611923b7ca2e 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site IM40_00590 5f1c149861c82a24ab9a611923b7ca2e 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 299 19.648 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 IM40_00590 5f1c149861c82a24ab9a611923b7ca2e 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 297 4.1E-96 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 IM40_00590 5f1c149861c82a24ab9a611923b7ca2e 302 Pfam PF01040 UbiA prenyltransferase family 36 282 3.2E-57 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 IM40_00590 5f1c149861c82a24ab9a611923b7ca2e 302 Gene3D G3DSA:1.10.357.140 25 181 5.1E-17 T 14-10-2018 IM40_05470 321fc8956b7d784aa2430673701bc577 719 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 275 470 9.5E-25 T 14-10-2018 IPR004477 ComEC/Rec2-related protein IM40_05470 321fc8956b7d784aa2430673701bc577 719 Pfam PF03772 Competence protein 254 537 1.4E-63 T 14-10-2018 IPR004477 ComEC/Rec2-related protein IM40_05470 321fc8956b7d784aa2430673701bc577 719 Pfam PF13567 Domain of unknown function (DUF4131) 47 205 1.4E-12 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 IM40_08395 1632694e75a1382c3e3aea71b726e512 253 SUPERFAMILY SSF56784 21 229 1.21E-40 T 14-10-2018 IPR036412 HAD-like superfamily IM40_08395 1632694e75a1382c3e3aea71b726e512 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 30 221 1.9E-27 T 14-10-2018 IM40_08395 1632694e75a1382c3e3aea71b726e512 253 Gene3D G3DSA:1.10.150.240 40 108 3.0E-44 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IM40_08395 1632694e75a1382c3e3aea71b726e512 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 164 221 1.2E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IM40_08395 1632694e75a1382c3e3aea71b726e512 253 Gene3D G3DSA:3.40.50.1000 28 237 3.0E-44 T 14-10-2018 IPR023214 HAD superfamily IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.3E-93 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 Gene3D G3DSA:3.30.300.20 17 106 1.7E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 Gene3D G3DSA:3.30.1140.32 107 207 5.0E-42 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.7 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 Pfam PF07650 KH domain 38 110 2.8E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 SUPERFAMILY SSF54814 2 105 5.61E-38 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 SMART SM00322 59 124 4.6E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 SUPERFAMILY SSF54821 107 205 4.05E-38 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.1E-37 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02050 e150ff908ab8f58f7a980863fc5e7df9 224 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.2E-18 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 SUPERFAMILY SSF48300 4 59 1.44E-17 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 23.267 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.0E-44 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 Gene3D G3DSA:3.30.1390.10 54 123 2.5E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 123 5.0E-22 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 SUPERFAMILY SSF54736 52 123 1.41E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 3.6E-29 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_06220 987e5fd91b8b3fe5cb2fde2597f12afd 123 Gene3D G3DSA:1.20.5.710 4 53 9.0E-18 T 14-10-2018 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 16 342 1.3E-128 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 SMART SM00865 212 330 5.3E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 405 38.237 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 PRINTS PR00423 Cell division protein FtsZ signature 131 152 2.9E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 PRINTS PR00423 Cell division protein FtsZ signature 217 238 2.9E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 PRINTS PR00423 Cell division protein FtsZ signature 194 216 2.9E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 PRINTS PR00423 Cell division protein FtsZ signature 103 123 2.9E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 Gene3D G3DSA:3.40.50.1440 9 224 1.1E-81 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 SUPERFAMILY SSF52490 17 213 8.37E-72 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 Gene3D G3DSA:3.30.1330.20 226 341 3.1E-38 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 179 9.4E-42 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 Pfam PF12327 FtsZ family, C-terminal domain 227 322 8.1E-39 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 SUPERFAMILY SSF55307 209 325 1.51E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 IM40_02880 123046b0eb5ee8d7dde9216b9a930347 486 SMART SM00864 18 210 1.9E-111 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 SUPERFAMILY SSF48179 193 302 5.87E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Gene3D G3DSA:1.10.1040.10 360 414 6.9E-8 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Pfam PF00378 Enoyl-CoA hydratase/isomerase 473 614 4.9E-12 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 SUPERFAMILY SSF48179 342 431 2.72E-14 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Gene3D G3DSA:3.90.226.10 469 683 9.2E-28 T 14-10-2018 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 190 6.1E-48 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 SUPERFAMILY SSF51735 4 190 2.03E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Gene3D G3DSA:3.40.50.720 1 193 8.8E-60 T 14-10-2018 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 359 402 2.2E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 193 294 1.2E-14 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 Gene3D G3DSA:1.10.1040.10 194 322 1.7E-19 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IM40_00480 70866cae0209ff1d50facee5d836aaa5 774 SUPERFAMILY SSF52096 463 771 1.35E-34 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_00490 25c8b295083769ddec2bffdb90e53061 174 Pfam PF13279 Thioesterase-like superfamily 32 143 3.4E-20 T 14-10-2018 IM40_00490 25c8b295083769ddec2bffdb90e53061 174 Gene3D G3DSA:3.10.129.10 26 154 3.3E-16 T 14-10-2018 IM40_00490 25c8b295083769ddec2bffdb90e53061 174 SUPERFAMILY SSF54637 27 141 4.27E-24 T 14-10-2018 IPR029069 HotDog domain superfamily IM40_05340 344be4e52d43b975dfc595a6f0318350 203 Gene3D G3DSA:3.90.1140.10 30 191 1.2E-5 T 14-10-2018 IM40_05340 344be4e52d43b975dfc595a6f0318350 203 SUPERFAMILY SSF55144 51 162 1.18E-5 T 14-10-2018 IPR009097 Cyclic phosphodiesterase IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 Hamap MF_00600 60 kDa chaperonin [groL]. 2 551 42.835 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.6E-263 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 SUPERFAMILY SSF54849 138 203 1.95E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 Gene3D G3DSA:3.30.260.10 136 410 2.5E-243 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 8.0E-102 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 Gene3D G3DSA:1.10.560.10 8 522 2.5E-243 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 Gene3D G3DSA:3.50.7.10 192 372 2.5E-243 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 SUPERFAMILY SSF48592 7 522 3.13E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily IM40_01500 ff2bbb6d93a717c730386c1b61914306 553 SUPERFAMILY SSF52029 185 376 3.14E-86 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.2E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 Pfam PF00281 Ribosomal protein L5 24 80 5.5E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 PIRSF PIRSF002161 1 179 1.8E-68 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 Gene3D G3DSA:3.30.1440.10 1 179 5.1E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 SUPERFAMILY SSF55282 3 178 3.06E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02080 bc2624d2c5bd6b429aece6af8f32f54a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.123 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 SUPERFAMILY SSF51735 163 442 7.13E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 SMART SM00919 163 400 1.2E-131 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Gene3D G3DSA:3.40.50.10750 572 725 1.6E-84 T 14-10-2018 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Pfam PF03949 Malic enzyme, NAD binding domain 165 357 5.0E-20 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 PIRSF PIRSF036684 1 757 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 3.0E-24 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 749 5.8E-88 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Gene3D G3DSA:3.40.50.10380 1 160 1.1E-65 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Gene3D G3DSA:3.40.50.10950 445 749 1.6E-84 T 14-10-2018 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 SUPERFAMILY SSF53223 10 161 2.66E-50 T 14-10-2018 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 SMART SM01274 18 151 7.8E-73 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 Gene3D G3DSA:3.40.50.720 161 444 3.9E-80 T 14-10-2018 IM40_05750 c17e833d1021a0a905af82a39199c3ea 766 SUPERFAMILY SSF53659 429 752 1.23E-84 T 14-10-2018 IM40_09360 831ff51163b78f92e1da6897980c4bb9 108 Pfam PF01548 Transposase 6 97 5.1E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_04570 7515379617f8de4058e3587724489bd2 250 Pfam PF13462 Thioredoxin 84 241 1.6E-18 T 14-10-2018 IPR012336 Thioredoxin-like fold IM40_04570 7515379617f8de4058e3587724489bd2 250 SUPERFAMILY SSF52833 73 241 2.45E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_04570 7515379617f8de4058e3587724489bd2 250 Gene3D G3DSA:3.40.30.10 74 244 1.0E-37 T 14-10-2018 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 2.3E-130 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 Gene3D G3DSA:3.40.50.720 4 326 9.0E-148 T 14-10-2018 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 104 8.5E-37 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 PIRSF PIRSF000149 1 335 2.3E-138 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 Gene3D G3DSA:3.30.360.10 152 316 9.0E-148 T 14-10-2018 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 SMART SM00846 3 153 3.9E-89 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 1.2E-61 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 SUPERFAMILY SSF51735 1 174 3.63E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.1E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.1E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.1E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.1E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.1E-37 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_04280 17e5975cc58f1760694ffe4eea246b87 335 SUPERFAMILY SSF55347 153 315 5.36E-67 T 14-10-2018 IM40_00680 5a6efbedfd1b7f4b8185a51df17b68ba 163 Pfam PF00430 ATP synthase B/B' CF(0) 13 142 2.9E-11 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 SMART SM00883 2 94 1.6E-57 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 SUPERFAMILY SSF50129 1 94 2.64E-35 T 14-10-2018 IPR011032 GroES-like superfamily IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.2E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 Gene3D G3DSA:2.30.33.40 1 96 1.0E-38 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 PRINTS PR00297 10kDa chaperonin signature 81 94 7.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 PRINTS PR00297 10kDa chaperonin signature 3 18 7.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 PRINTS PR00297 10kDa chaperonin signature 60 72 7.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 PRINTS PR00297 10kDa chaperonin signature 25 46 7.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_01495 909bb34fca73f62c6b2a7a637dc4bccc 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.957 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 Pfam PF00817 impB/mucB/samB family 8 152 8.6E-36 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 Gene3D G3DSA:3.30.70.270 6 157 1.9E-45 T 14-10-2018 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 SUPERFAMILY SSF56672 4 233 3.74E-69 T 14-10-2018 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 Gene3D G3DSA:2.30.40.20 13 76 1.9E-45 T 14-10-2018 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 355 7.0E-13 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 Pfam PF13438 Domain of unknown function (DUF4113) 368 416 3.1E-15 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 IM40_10760 7cd2f812556ba68e42a421895503d9b7 417 Gene3D G3DSA:1.10.150.20 177 229 2.3E-7 T 14-10-2018 IM40_01135 17aed713defeb1316d62156320ef26dc 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 50 1.4E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IM40_01135 17aed713defeb1316d62156320ef26dc 343 Gene3D G3DSA:1.10.3720.10 129 340 1.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily IM40_01135 17aed713defeb1316d62156320ef26dc 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 340 3.1E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IM40_01135 17aed713defeb1316d62156320ef26dc 343 SUPERFAMILY SSF161098 136 323 1.96E-19 T 14-10-2018 IPR035906 MetI-like superfamily IM40_10345 3cd44eacaa01523160f268d2a6fab8e6 232 Pfam PF13505 Outer membrane protein beta-barrel domain 29 209 9.5E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel IM40_10345 3cd44eacaa01523160f268d2a6fab8e6 232 SUPERFAMILY SSF56925 67 204 1.75E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IM40_10345 3cd44eacaa01523160f268d2a6fab8e6 232 Gene3D G3DSA:2.40.160.20 88 232 5.3E-8 T 14-10-2018 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 Pfam PF00717 Peptidase S24-like 32 120 3.2E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 ProSitePatterns PS00761 Signal peptidases I signature 3. 195 208 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 ProSitePatterns PS00760 Signal peptidases I lysine active site. 98 110 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 233 2.9E-43 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 Gene3D G3DSA:2.10.109.10 26 232 1.1E-53 T 14-10-2018 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 190 209 8.4E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 26 42 8.4E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 96 108 8.4E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 Gene3D G3DSA:2.170.230.10 107 189 1.1E-53 T 14-10-2018 IM40_02515 bb04854880ea5dea0c17fd8f22709241 257 SUPERFAMILY SSF51306 26 255 1.23E-56 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_08185 96dd3c7223d1b61f4876ce22391dbb38 292 Gene3D G3DSA:3.40.190.290 96 290 1.4E-24 T 14-10-2018 IM40_08185 96dd3c7223d1b61f4876ce22391dbb38 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 3.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_08185 96dd3c7223d1b61f4876ce22391dbb38 292 SUPERFAMILY SSF46785 8 116 4.68E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_08185 96dd3c7223d1b61f4876ce22391dbb38 292 Pfam PF03466 LysR substrate binding domain 95 239 1.3E-16 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_08185 96dd3c7223d1b61f4876ce22391dbb38 292 SUPERFAMILY SSF53850 95 291 2.71E-21 T 14-10-2018 IM40_08185 96dd3c7223d1b61f4876ce22391dbb38 292 Gene3D G3DSA:1.10.10.10 9 95 1.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 PRINTS PR00142 RecA protein signature 241 270 4.0E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 PRINTS PR00142 RecA protein signature 295 312 4.0E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 PRINTS PR00142 RecA protein signature 208 236 4.0E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 PRINTS PR00142 RecA protein signature 163 192 4.0E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 PRINTS PR00142 RecA protein signature 125 154 4.0E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 PRINTS PR00142 RecA protein signature 91 120 4.0E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 SMART SM00382 55 226 9.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 ProSitePatterns PS00321 recA signature. 211 219 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 Hamap MF_00268 Protein RecA [recA]. 3 327 52.394 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 Gene3D G3DSA:3.40.50.300 24 265 7.6E-84 T 14-10-2018 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 2 322 4.0E-176 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 Gene3D G3DSA:3.30.250.10 266 340 1.3E-26 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 SUPERFAMILY SSF54752 266 324 1.14E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 SUPERFAMILY SSF52540 3 265 9.55E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01355 946bf47abef7645e04a7a5c81b32479c 345 Pfam PF00154 recA bacterial DNA recombination protein 5 266 1.4E-146 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IM40_01800 eaafcce45cd11eaafe91e12b5f07de33 63 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 6 59 15.578 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 IM40_01800 eaafcce45cd11eaafe91e12b5f07de33 63 SUPERFAMILY SSF57716 9 57 1.57E-15 T 14-10-2018 IM40_01800 eaafcce45cd11eaafe91e12b5f07de33 63 Pfam PF03884 DNA gyrase inhibitor YacG 11 54 3.6E-15 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 IM40_01800 eaafcce45cd11eaafe91e12b5f07de33 63 Gene3D G3DSA:3.30.50.10 4 62 1.7E-16 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 IM40_05565 83980c72643bcedacb94345546c977c8 332 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 319 33.227 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 Gene3D G3DSA:3.40.50.720 1 184 8.0E-57 T 14-10-2018 IM40_05565 83980c72643bcedacb94345546c977c8 332 PIRSF PIRSF000114 1 329 3.7E-94 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 SUPERFAMILY SSF48179 176 328 4.08E-45 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IM40_05565 83980c72643bcedacb94345546c977c8 332 SUPERFAMILY SSF51735 4 175 7.13E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05565 83980c72643bcedacb94345546c977c8 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 154 5.5E-43 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 3.6E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 3.6E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 3.6E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 3.6E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 3.6E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 3.6E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 Gene3D G3DSA:1.10.1040.10 186 332 7.5E-43 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IM40_05565 83980c72643bcedacb94345546c977c8 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 314 1.0E-42 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05565 83980c72643bcedacb94345546c977c8 332 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SMART SM00322 238 310 2.7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SMART SM00322 311 385 0.88 T 14-10-2018 IPR004087 K Homology domain GO:0003676 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 11 418 29.782 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Pfam PF13184 NusA-like KH domain 238 304 1.2E-24 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SUPERFAMILY SSF69705 12 134 3.66E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SMART SM00316 142 208 5.8E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Gene3D G3DSA:1.10.150.20 362 428 1.5E-21 T 14-10-2018 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SUPERFAMILY SSF47794 438 499 4.08E-10 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SUPERFAMILY SSF47794 362 423 1.57E-14 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Pfam PF00575 S1 RNA binding domain 142 200 1.3E-4 T 14-10-2018 IPR003029 S1 domain GO:0003676 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SUPERFAMILY SSF54814 287 349 4.05E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Pfam PF14520 Helix-hairpin-helix domain 440 496 3.4E-6 T 14-10-2018 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Gene3D G3DSA:3.30.1480.10 10 136 1.0E-42 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 14 349 8.9E-129 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Gene3D G3DSA:3.30.300.20 207 285 2.7E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Gene3D G3DSA:1.10.150.20 440 498 1.2E-14 T 14-10-2018 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Gene3D G3DSA:3.30.300.20 286 353 1.1E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Pfam PF08529 NusA N-terminal domain 13 132 4.0E-38 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SUPERFAMILY SSF50249 140 207 1.4E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 373 422 5.5E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 SUPERFAMILY SSF54814 208 285 1.11E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IM40_05445 be8b4750e6a903da065de0cd00f1c768 510 Gene3D G3DSA:2.40.50.140 144 206 1.1E-23 T 14-10-2018 IM40_05065 6bfad9e0e960c07ee8e57c977cbac722 252 Gene3D G3DSA:3.60.140.10 1 251 3.1E-82 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily IM40_05065 6bfad9e0e960c07ee8e57c977cbac722 252 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 236 1.8E-50 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase IM40_05065 6bfad9e0e960c07ee8e57c977cbac722 252 SUPERFAMILY SSF64438 7 249 2.2E-73 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic IM40_05065 6bfad9e0e960c07ee8e57c977cbac722 252 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 247 2.8E-63 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase IM40_05370 058bf698ed317ed77e215acd77952f22 238 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 8 236 1.4E-86 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IM40_05370 058bf698ed317ed77e215acd77952f22 238 Gene3D G3DSA:3.40.1280.10 5 175 1.2E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_05370 058bf698ed317ed77e215acd77952f22 238 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 222 1.5E-55 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IM40_05370 058bf698ed317ed77e215acd77952f22 238 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 238 97.344 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IM40_05370 058bf698ed317ed77e215acd77952f22 238 SUPERFAMILY SSF75217 5 236 1.77E-91 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases IM40_05370 058bf698ed317ed77e215acd77952f22 238 PIRSF PIRSF000386 5 238 1.0E-93 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IM40_05370 058bf698ed317ed77e215acd77952f22 238 Gene3D G3DSA:1.10.1270.20 176 236 1.1E-27 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IM40_06820 5e9ea00166c7aa44df636d40482eb475 251 Pfam PF01609 Transposase DDE domain 92 224 5.0E-14 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IM40_06820 5e9ea00166c7aa44df636d40482eb475 251 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 9 78 4.9E-16 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 2.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 2.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 2.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 56 1.4E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 Gene3D G3DSA:1.20.5.1150 14 52 8.0E-10 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 4.0E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 2 55 14.343 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04275 fed2d65fdb75a961fbcb03c3ed409570 67 Pfam PF01165 Ribosomal protein S21 3 55 2.1E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_07295 2b7b43e6520015fc4e2038bc1fb18b41 339 Pfam PF00146 NADH dehydrogenase 19 324 4.7E-132 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07295 2b7b43e6520015fc4e2038bc1fb18b41 339 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 331 25.764 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07295 2b7b43e6520015fc4e2038bc1fb18b41 339 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07295 2b7b43e6520015fc4e2038bc1fb18b41 339 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 SUPERFAMILY SSF50156 402 497 5.52E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 SMART SM00228 401 488 0.029 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 SMART SM00228 282 364 4.0E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 SUPERFAMILY SSF50156 241 365 7.36E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 PRINTS PR00834 HtrA/DegQ protease family signature 110 122 1.3E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 1.3E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 PRINTS PR00834 HtrA/DegQ protease family signature 131 151 1.3E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 1.3E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 PRINTS PR00834 HtrA/DegQ protease family signature 322 334 1.3E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 PRINTS PR00834 HtrA/DegQ protease family signature 172 196 1.3E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 Pfam PF13365 Trypsin-like peptidase domain 98 243 5.8E-30 T 14-10-2018 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 36 494 5.4E-132 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 Pfam PF13180 PDZ domain 282 371 9.7E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 Gene3D G3DSA:2.40.10.120 35 276 8.4E-73 T 14-10-2018 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 SUPERFAMILY SSF50494 34 278 2.79E-58 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 Gene3D G3DSA:2.30.42.10 400 507 6.3E-12 T 14-10-2018 IM40_05665 2c038a71d97c9962ffcee0946ecf9dd0 508 Gene3D G3DSA:2.30.42.10 277 385 3.1E-27 T 14-10-2018 IM40_05190 0a30d2301c70c4c89d347fda03885272 159 Pfam PF01613 Flavin reductase like domain 12 157 1.6E-34 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IM40_05190 0a30d2301c70c4c89d347fda03885272 159 SMART SM00903 12 156 4.5E-43 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IM40_05190 0a30d2301c70c4c89d347fda03885272 159 Gene3D G3DSA:2.30.110.10 1 159 4.0E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IM40_05190 0a30d2301c70c4c89d347fda03885272 159 SUPERFAMILY SSF50475 4 157 9.82E-44 T 14-10-2018 IM40_03650 c0e50689893e045b74d5f349a561bc09 197 Pfam PF03167 Uracil DNA glycosylase superfamily 34 188 2.1E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IM40_03650 c0e50689893e045b74d5f349a561bc09 197 Gene3D G3DSA:3.40.470.10 2 197 2.0E-67 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IM40_03650 c0e50689893e045b74d5f349a561bc09 197 SUPERFAMILY SSF52141 7 195 1.54E-51 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IM40_03650 c0e50689893e045b74d5f349a561bc09 197 SMART SM00986 31 189 1.8E-27 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IM40_03650 c0e50689893e045b74d5f349a561bc09 197 SMART SM00987 31 189 1.8E-27 T 14-10-2018 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 Gene3D G3DSA:3.40.50.720 6 93 7.0E-14 T 14-10-2018 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 SUPERFAMILY SSF53244 313 453 2.88E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 Gene3D G3DSA:3.40.1190.10 94 312 3.8E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 Pfam PF08245 Mur ligase middle domain 111 292 7.7E-27 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 363 1.8E-5 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 Gene3D G3DSA:3.90.190.20 313 450 1.7E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 451 1.3E-111 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 SUPERFAMILY SSF51984 6 93 1.53E-9 T 14-10-2018 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 453 31.104 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_02840 ee09458400c855db23634c28fd0ca5b1 460 SUPERFAMILY SSF53623 102 310 7.33E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IM40_08890 61091f3e5c580ead649b217b7b60a583 290 Gene3D G3DSA:3.40.50.1000 98 201 5.4E-49 T 14-10-2018 IPR023214 HAD superfamily IM40_08890 61091f3e5c580ead649b217b7b60a583 290 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 12 250 2.1E-56 T 14-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 IM40_08890 61091f3e5c580ead649b217b7b60a583 290 SUPERFAMILY SSF56784 17 263 1.47E-41 T 14-10-2018 IPR036412 HAD-like superfamily IM40_08890 61091f3e5c580ead649b217b7b60a583 290 Pfam PF13344 Haloacid dehalogenase-like hydrolase 21 97 2.4E-11 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA IM40_08890 61091f3e5c580ead649b217b7b60a583 290 Pfam PF13242 HAD-hyrolase-like 202 258 1.1E-12 T 14-10-2018 IM40_08890 61091f3e5c580ead649b217b7b60a583 290 Gene3D G3DSA:3.40.50.1000 20 252 5.4E-49 T 14-10-2018 IPR023214 HAD superfamily IM40_08890 61091f3e5c580ead649b217b7b60a583 290 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 21 251 3.1E-34 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 SUPERFAMILY SSF53474 1 306 9.51E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.3E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.3E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.3E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 310 1.4E-111 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PIRSF PIRSF006431 1 315 2.9E-125 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 2.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 2.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 2.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 Gene3D G3DSA:3.40.50.1820 1 313 5.0E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_03920 fc501e3447fb41df6d789f74cc22300b 315 Pfam PF00561 alpha/beta hydrolase fold 36 296 1.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 SMART SM00857 6 140 3.1E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Gene3D G3DSA:3.40.50.1390 6 128 3.3E-36 T 14-10-2018 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Pfam PF02796 Helix-turn-helix domain of resolvase 142 185 5.0E-13 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Gene3D G3DSA:1.10.10.60 142 185 6.5E-7 T 14-10-2018 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 SUPERFAMILY SSF53041 5 140 9.55E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Pfam PF00239 Resolvase, N terminal domain 7 138 8.2E-35 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 SUPERFAMILY SSF46689 142 183 1.25E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10245 14d4d41bd4c529a7d61cba9c1bda5c9a 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 SMART SM00857 6 140 3.1E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Gene3D G3DSA:3.40.50.1390 6 128 3.3E-36 T 14-10-2018 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Pfam PF02796 Helix-turn-helix domain of resolvase 142 185 5.0E-13 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Gene3D G3DSA:1.10.10.60 142 185 6.5E-7 T 14-10-2018 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 SUPERFAMILY SSF53041 5 140 9.55E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 Pfam PF00239 Resolvase, N terminal domain 7 138 8.2E-35 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 SUPERFAMILY SSF46689 142 183 1.25E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10670 14d4d41bd4c529a7d61cba9c1bda5c9a 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 IM40_00365 4eaea49af79997ae05de197746974dc9 223 Gene3D G3DSA:3.40.50.300 2 221 8.6E-37 T 14-10-2018 IM40_00365 4eaea49af79997ae05de197746974dc9 223 SUPERFAMILY SSF52540 5 200 4.97E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00365 4eaea49af79997ae05de197746974dc9 223 SMART SM00382 30 215 8.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_00365 4eaea49af79997ae05de197746974dc9 223 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 206 7.1E-46 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 IM40_00365 4eaea49af79997ae05de197746974dc9 223 Pfam PF00005 ABC transporter 23 166 2.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 SUPERFAMILY SSF51735 1 242 3.48E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 Gene3D G3DSA:3.40.50.720 1 273 2.1E-76 T 14-10-2018 IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 Pfam PF00106 short chain dehydrogenase 8 200 3.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_00495 d693ace7fca10aaee0ba305e79c1242a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 237 1.4E-62 T 14-10-2018 IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 179 0.0013 T 14-10-2018 IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.9E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.9E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.9E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.9E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.9E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.9E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 240 6.5E-107 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 SUPERFAMILY SSF51735 3 240 2.92E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05110 ddb96c892dbb09990dbf69d145f38177 241 Gene3D G3DSA:3.40.50.720 1 240 2.5E-79 T 14-10-2018 IM40_08275 7754838a44c9027ac1f9c8d754bae5ad 63 Pfam PF13610 DDE domain 1 41 2.4E-6 T 14-10-2018 IPR032874 DDE domain IM40_00610 41297281491938635849ab1774568d52 692 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 690 25.109 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 IM40_00610 41297281491938635849ab1774568d52 692 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 692 3.5E-261 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 IM40_00610 41297281491938635849ab1774568d52 692 Pfam PF03030 Inorganic H+ pyrophosphatase 12 684 5.3E-260 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 IM40_00610 41297281491938635849ab1774568d52 692 PIRSF PIRSF001265 1 692 7.9E-247 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 IM40_02590 f86e7e2caaa5206a6489abd38417a4a7 313 Gene3D G3DSA:1.20.910.10 102 312 8.5E-25 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_02590 f86e7e2caaa5206a6489abd38417a4a7 313 SUPERFAMILY SSF48613 120 300 4.82E-7 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_07165 a7ff818b80aee3fbd6ccf8d6043fc30d 246 Gene3D G3DSA:3.40.50.150 11 245 7.6E-74 T 14-10-2018 IM40_07165 a7ff818b80aee3fbd6ccf8d6043fc30d 246 Pfam PF08241 Methyltransferase domain 67 162 1.5E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 IM40_07165 a7ff818b80aee3fbd6ccf8d6043fc30d 246 SUPERFAMILY SSF53335 15 243 4.93E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_07165 a7ff818b80aee3fbd6ccf8d6043fc30d 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 245 37.506 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 IM40_07165 a7ff818b80aee3fbd6ccf8d6043fc30d 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 239 6.7E-83 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 SUPERFAMILY SSF52540 10 178 2.45E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 Gene3D G3DSA:3.40.50.300 10 179 1.3E-48 T 14-10-2018 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 PRINTS PR01100 Shikimate kinase family signature 83 92 8.6E-14 T 14-10-2018 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 PRINTS PR01100 Shikimate kinase family signature 37 50 8.6E-14 T 14-10-2018 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 PRINTS PR01100 Shikimate kinase family signature 13 28 8.6E-14 T 14-10-2018 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 PRINTS PR01100 Shikimate kinase family signature 65 73 8.6E-14 T 14-10-2018 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 PRINTS PR01100 Shikimate kinase family signature 104 121 8.6E-14 T 14-10-2018 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 Pfam PF01202 Shikimate kinase 19 174 3.7E-41 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 IM40_04045 d129fcc39b500c75c62e2c9869cd5d65 180 Hamap MF_00109 Shikimate kinase [aroK]. 10 175 24.582 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 IM40_09715 5f281b42d2f8eac4bdac0a84828af1d8 843 Gene3D G3DSA:3.40.50.300 435 584 8.2E-17 T 14-10-2018 IM40_09715 5f281b42d2f8eac4bdac0a84828af1d8 843 SUPERFAMILY SSF52540 453 715 1.48E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09715 5f281b42d2f8eac4bdac0a84828af1d8 843 Pfam PF00931 NB-ARC domain 467 666 1.1E-7 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 383 416 0.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 301 334 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 467 500 0.015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 425 458 0.056 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 260 293 0.068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 342 375 8.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SMART SM00028 218 251 140.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 Pfam PF13424 Tetratricopeptide repeat 424 499 1.9E-16 T 14-10-2018 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 Pfam PF13424 Tetratricopeptide repeat 342 414 1.5E-16 T 14-10-2018 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 Pfam PF13424 Tetratricopeptide repeat 259 333 1.9E-15 T 14-10-2018 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SUPERFAMILY SSF48452 220 413 2.28E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 Gene3D G3DSA:1.25.40.10 203 378 4.0E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 SUPERFAMILY SSF48452 381 517 1.76E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_08830 4c758fc4c10bfd18c663ef4e93cb0b2e 574 Gene3D G3DSA:1.25.40.10 379 574 5.8E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 SUPERFAMILY SSF52374 8 168 9.12E-40 T 14-10-2018 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 66 1.1E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 168 1.0E-58 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 Pfam PF01467 Cytidylyltransferase-like 11 145 3.0E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 2.3E-28 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 124 146 2.3E-28 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 97 113 2.3E-28 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 Gene3D G3DSA:3.40.50.620 5 172 6.9E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_02930 4a88520178d89d87aabd94d5b9c648c8 172 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 8 170 35.338 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 22 469 3.2E-155 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 244 265 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 164 182 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 290 305 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 377 396 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 13 38 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 427 448 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 335 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 349 367 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 193 212 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 PRINTS PR01165 Cytochrome c oxidase subunit I signature 62 85 2.1E-152 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 Gene3D G3DSA:1.20.210.10 10 523 1.9E-244 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 246 300 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 SUPERFAMILY SSF81442 10 522 2.49E-221 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_00585 6d36af85d3ceffec29498038a3a447e0 523 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 14 522 1.4E-218 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 IM40_06530 a123a003c0191a5426f75d829edfe00f 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 63 273 6.3E-68 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 IM40_06530 a123a003c0191a5426f75d829edfe00f 362 SUPERFAMILY SSF102405 72 275 4.58E-40 T 14-10-2018 IM40_06530 a123a003c0191a5426f75d829edfe00f 362 Gene3D G3DSA:1.10.10.10 287 361 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06530 a123a003c0191a5426f75d829edfe00f 362 Gene3D G3DSA:3.40.50.450 1 278 8.3E-104 T 14-10-2018 IM40_06530 a123a003c0191a5426f75d829edfe00f 362 Pfam PF02481 DNA recombination-mediator protein A 66 266 5.9E-72 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 IM40_02805 95b5e1ef91f2bc5a9abf2d4709fc4b50 156 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 156 31.673 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 IM40_02805 95b5e1ef91f2bc5a9abf2d4709fc4b50 156 SUPERFAMILY SSF89447 1 140 4.34E-33 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily IM40_02805 95b5e1ef91f2bc5a9abf2d4709fc4b50 156 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 3 133 1.0E-10 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 IM40_02805 95b5e1ef91f2bc5a9abf2d4709fc4b50 156 Pfam PF02381 MraZ protein, putative antitoxin-like 3 31 4.1E-6 T 14-10-2018 IPR020603 MraZ domain IM40_02805 95b5e1ef91f2bc5a9abf2d4709fc4b50 156 Pfam PF02381 MraZ protein, putative antitoxin-like 79 143 5.4E-8 T 14-10-2018 IPR020603 MraZ domain IM40_02805 95b5e1ef91f2bc5a9abf2d4709fc4b50 156 Gene3D G3DSA:2.40.330.20 1 146 2.2E-30 T 14-10-2018 IPR038619 MraZ superfamily IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 PIRSF PIRSF000157 1 944 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Pfam PF02779 Transketolase, pyrimidine binding domain 597 791 1.8E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Gene3D G3DSA:3.40.50.12470 557 813 2.8E-167 T 14-10-2018 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Pfam PF00676 Dehydrogenase E1 component 215 526 8.8E-54 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 45 8.7E-15 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 SMART SM00861 598 791 5.8E-57 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Gene3D G3DSA:1.10.287.1150 90 171 3.5E-26 T 14-10-2018 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 SUPERFAMILY SSF52518 126 544 1.77E-84 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 10 941 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Gene3D G3DSA:3.40.50.11610 734 940 2.8E-167 T 14-10-2018 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 942 7.0E-51 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 SUPERFAMILY SSF52518 581 797 3.43E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold IM40_07220 3a8f8cdfed21f3214efeb3953b32dcc2 946 Gene3D G3DSA:3.40.50.970 172 534 1.8E-141 T 14-10-2018 IM40_02250 c30bf64fce291f821e0d5a23f8cc2118 463 Pfam PF06122 Conjugative relaxosome accessory transposon protein 25 385 9.6E-105 T 14-10-2018 IPR010927 Type IV conjugative transfer system protein TraH IM40_04165 ee42782007f2d43d7ff38cdfb7250414 382 SUPERFAMILY SSF53383 6 378 8.04E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_04165 ee42782007f2d43d7ff38cdfb7250414 382 Gene3D G3DSA:3.90.1150.10 264 379 4.3E-9 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_04165 ee42782007f2d43d7ff38cdfb7250414 382 Gene3D G3DSA:3.40.640.10 24 261 3.6E-39 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_04165 ee42782007f2d43d7ff38cdfb7250414 382 Pfam PF00266 Aminotransferase class-V 32 305 9.1E-10 T 14-10-2018 IPR000192 Aminotransferase class V domain IM40_04165 ee42782007f2d43d7ff38cdfb7250414 382 PIRSF PIRSF000525 5 380 4.5E-40 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 IM40_04370 053cabc1083604d709b76fac2d5eabcc 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 291 1.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IM40_04370 053cabc1083604d709b76fac2d5eabcc 304 Gene3D G3DSA:1.10.3720.10 14 300 3.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily IM40_04370 053cabc1083604d709b76fac2d5eabcc 304 SUPERFAMILY SSF161098 18 296 5.36E-51 T 14-10-2018 IPR035906 MetI-like superfamily IM40_10215 3077fdc2c8ac48dc75777e4b74cc2e89 561 SUPERFAMILY SSF52151 232 540 2.09E-43 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_10215 3077fdc2c8ac48dc75777e4b74cc2e89 561 Gene3D G3DSA:3.40.1090.10 225 559 7.0E-61 T 14-10-2018 IM40_10215 3077fdc2c8ac48dc75777e4b74cc2e89 561 Pfam PF01734 Patatin-like phospholipase 235 436 4.4E-20 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_10700 3077fdc2c8ac48dc75777e4b74cc2e89 561 SUPERFAMILY SSF52151 232 540 2.09E-43 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_10700 3077fdc2c8ac48dc75777e4b74cc2e89 561 Gene3D G3DSA:3.40.1090.10 225 559 7.0E-61 T 14-10-2018 IM40_10700 3077fdc2c8ac48dc75777e4b74cc2e89 561 Pfam PF01734 Patatin-like phospholipase 235 436 4.4E-20 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_09050 eced25c43b09aef8b8902e4945b8e594 201 Gene3D G3DSA:3.40.50.300 1 200 5.8E-55 T 14-10-2018 IM40_09050 eced25c43b09aef8b8902e4945b8e594 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 181 8.8E-38 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 IM40_09050 eced25c43b09aef8b8902e4945b8e594 201 Pfam PF01121 Dephospho-CoA kinase 6 179 7.8E-42 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 IM40_09050 eced25c43b09aef8b8902e4945b8e594 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 199 22.986 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 IM40_09050 eced25c43b09aef8b8902e4945b8e594 201 SUPERFAMILY SSF52540 4 197 9.61E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07560 48484520ea5fafe50fdc496556daf647 352 Pfam PF05036 Sporulation related domain 266 333 1.8E-5 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 IM40_07560 48484520ea5fafe50fdc496556daf647 352 Gene3D G3DSA:3.30.70.1070 260 339 7.5E-6 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IM40_07560 48484520ea5fafe50fdc496556daf647 352 SUPERFAMILY SSF110997 264 332 8.24E-6 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 Gene3D G3DSA:3.40.50.2020 4 298 2.1E-101 T 14-10-2018 IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 Gene3D G3DSA:3.40.50.2020 144 286 2.1E-101 T 14-10-2018 IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 297 1.1E-15 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 SMART SM01400 1 117 1.1E-53 T 14-10-2018 IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 SUPERFAMILY SSF53271 66 298 8.64E-46 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 298 6.0E-93 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 IM40_03275 eb202e1978dbdb66d340da1bff81c829 300 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 1.1E-37 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 IM40_10095 f76a3d56fef3b04dd9a348d0528bc0dd 327 SUPERFAMILY SSF52540 25 308 1.43E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10095 f76a3d56fef3b04dd9a348d0528bc0dd 327 Pfam PF00437 Type II/IV secretion system protein 37 306 1.1E-40 T 14-10-2018 IPR001482 Type II/IV secretion system protein IM40_10095 f76a3d56fef3b04dd9a348d0528bc0dd 327 Gene3D G3DSA:3.30.450.90 28 134 8.2E-10 T 14-10-2018 IM40_10095 f76a3d56fef3b04dd9a348d0528bc0dd 327 Gene3D G3DSA:3.40.50.300 141 319 1.0E-39 T 14-10-2018 IM40_08900 108451b387b37740ff936949a609918e 188 SUPERFAMILY SSF50249 66 127 1.85E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_08900 108451b387b37740ff936949a609918e 188 Gene3D G3DSA:2.40.50.140 130 187 1.1E-19 T 14-10-2018 IM40_08900 108451b387b37740ff936949a609918e 188 SMART SM01185 68 122 8.8E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 IM40_08900 108451b387b37740ff936949a609918e 188 SUPERFAMILY SSF50104 3 64 6.02E-17 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily IM40_08900 108451b387b37740ff936949a609918e 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 3.6E-19 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 IM40_08900 108451b387b37740ff936949a609918e 188 SMART SM00841 130 185 4.4E-27 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 IM40_08900 108451b387b37740ff936949a609918e 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 1.8E-68 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 IM40_08900 108451b387b37740ff936949a609918e 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 43.446 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 IM40_08900 108451b387b37740ff936949a609918e 188 Gene3D G3DSA:2.30.30.30 3 63 9.8E-21 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 IM40_08900 108451b387b37740ff936949a609918e 188 Gene3D G3DSA:2.40.50.140 65 128 4.0E-21 T 14-10-2018 IM40_08900 108451b387b37740ff936949a609918e 188 SUPERFAMILY SSF50249 129 186 8.57E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_08900 108451b387b37740ff936949a609918e 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.6E-20 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like IM40_08900 108451b387b37740ff936949a609918e 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.4E-20 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 IM40_08900 108451b387b37740ff936949a609918e 188 PIRSF PIRSF005901 1 187 1.1E-66 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 PRINTS PR00604 Class IA and IB cytochrome C signature 126 142 1.0E-18 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 PRINTS PR00604 Class IA and IB cytochrome C signature 145 155 1.0E-18 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 PRINTS PR00604 Class IA and IB cytochrome C signature 162 170 1.0E-18 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 PRINTS PR00604 Class IA and IB cytochrome C signature 83 90 1.0E-18 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 PRINTS PR00604 Class IA and IB cytochrome C signature 96 111 1.0E-18 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 PRINTS PR00604 Class IA and IB cytochrome C signature 112 122 1.0E-18 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 SUPERFAMILY SSF46626 71 174 4.23E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 Gene3D G3DSA:1.10.760.10 36 170 2.0E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 IM40_01120 4d7d938e0595d4983ee8a6e11df00ff7 179 Pfam PF00034 Cytochrome c 74 171 2.4E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_04695 7e9438076dce584066a61b5a4131ef85 140 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 55 138 4.7E-35 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 IM40_09120 b508f40e6dcff8d9af65f09de10c8c84 324 Gene3D G3DSA:3.40.80.10 71 225 2.8E-43 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_09120 b508f40e6dcff8d9af65f09de10c8c84 324 Gene3D G3DSA:1.10.101.10 233 322 1.8E-6 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 IM40_09120 b508f40e6dcff8d9af65f09de10c8c84 324 SUPERFAMILY SSF55846 56 222 7.85E-44 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_09120 b508f40e6dcff8d9af65f09de10c8c84 324 SMART SM00644 61 211 4.8E-17 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_09120 b508f40e6dcff8d9af65f09de10c8c84 324 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 70 211 1.6E-25 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_02480 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_02480 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_02615 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_02615 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_08435 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_08435 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_11105 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_11105 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_07960 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_07960 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_10475 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_10475 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_10835 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_10835 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_05800 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_05800 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_10520 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF01548 Transposase 18 161 9.3E-21 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_10520 7273286d260d814bd3302e4a0f2bb1df 454 Pfam PF02371 Transposase IS116/IS110/IS902 family 294 377 5.2E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_01165 d914aacb6aef91ba105100a4267ae797 325 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 318 30.675 T 14-10-2018 IPR003770 Endolytic murein transglycosylase IM40_01165 d914aacb6aef91ba105100a4267ae797 325 Gene3D G3DSA:3.30.160.60 290 324 3.1E-9 T 14-10-2018 IM40_01165 d914aacb6aef91ba105100a4267ae797 325 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 140 316 3.6E-54 T 14-10-2018 IPR003770 Endolytic murein transglycosylase IM40_01165 d914aacb6aef91ba105100a4267ae797 325 Pfam PF02618 YceG-like family 41 312 3.1E-75 T 14-10-2018 IPR003770 Endolytic murein transglycosylase IM40_01165 d914aacb6aef91ba105100a4267ae797 325 Gene3D G3DSA:1.10.8.1150 34 109 1.5E-13 T 14-10-2018 IM40_03300 f62fbb2c167cdd02a8d7060ff68a0260 152 Gene3D G3DSA:1.10.10.10 6 141 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03300 f62fbb2c167cdd02a8d7060ff68a0260 152 Pfam PF13463 Winged helix DNA-binding domain 36 100 1.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_03300 f62fbb2c167cdd02a8d7060ff68a0260 152 SUPERFAMILY SSF46785 8 143 7.24E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_03300 f62fbb2c167cdd02a8d7060ff68a0260 152 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site IM40_03300 f62fbb2c167cdd02a8d7060ff68a0260 152 SMART SM00347 28 126 2.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_06840 4310b44ed85f1722045b9bc35816f4c3 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 6.7E-44 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related IM40_06840 4310b44ed85f1722045b9bc35816f4c3 110 Pfam PF00462 Glutaredoxin 17 81 3.1E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 IM40_06840 4310b44ed85f1722045b9bc35816f4c3 110 Gene3D G3DSA:3.40.30.10 7 103 5.2E-32 T 14-10-2018 IM40_06840 4310b44ed85f1722045b9bc35816f4c3 110 SUPERFAMILY SSF52833 4 106 1.93E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_06840 4310b44ed85f1722045b9bc35816f4c3 110 PIRSF PIRSF005894 1 108 1.3E-46 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 SUPERFAMILY SSF52540 105 308 2.47E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 SMART SM00962 108 309 1.6E-108 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 Pfam PF02881 SRP54-type protein, helical bundle domain 25 88 6.5E-8 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 Pfam PF00448 SRP54-type protein, GTPase domain 108 308 2.4E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 Gene3D G3DSA:1.20.120.140 12 307 3.9E-107 T 14-10-2018 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 SUPERFAMILY SSF47364 9 85 3.79E-18 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 SMART SM00963 14 93 3.7E-11 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 SMART SM00382 107 287 4.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 Gene3D G3DSA:3.40.50.300 108 297 3.9E-107 T 14-10-2018 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 38 308 8.4E-97 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 IM40_04120 eb0d83f4f2001a6019567c7aa8548aef 310 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 37 309 55.714 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.7E-179 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 SMART SM00962 100 296 1.7E-107 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.4E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Gene3D G3DSA:1.20.120.140 4 306 5.4E-119 T 14-10-2018 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Pfam PF02978 Signal peptide binding domain 327 427 2.8E-30 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 447 33.054 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 SMART SM00382 99 301 5.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Pfam PF00448 SRP54-type protein, GTPase domain 101 295 1.0E-70 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Gene3D G3DSA:3.40.50.300 90 285 5.4E-119 T 14-10-2018 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 SUPERFAMILY SSF52540 42 354 3.85E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 Gene3D G3DSA:1.10.260.30 327 447 9.7E-41 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 SUPERFAMILY SSF47446 327 431 1.34E-34 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 IM40_05385 f5ec85d03debc609aa553aad7dc7c177 449 SMART SM00963 1 86 2.4E-35 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IM40_02030 ec1b364d836f9523078662004f587495 107 Pfam PF00276 Ribosomal protein L23 19 103 4.0E-29 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 IM40_02030 ec1b364d836f9523078662004f587495 107 Gene3D G3DSA:3.30.70.330 10 106 3.5E-31 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IM40_02030 ec1b364d836f9523078662004f587495 107 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 17 106 20.74 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 IM40_02030 ec1b364d836f9523078662004f587495 107 SUPERFAMILY SSF54189 17 103 1.01E-28 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02310 7301f78dce34d6c8f562d0a2f7d5f23d 832 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 43 265 2.6E-36 T 14-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase IM40_02310 7301f78dce34d6c8f562d0a2f7d5f23d 832 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 48 828 1.8E-219 T 14-10-2018 IPR014117 Type-IV secretion system protein TraC IM40_02310 7301f78dce34d6c8f562d0a2f7d5f23d 832 Gene3D G3DSA:1.10.8.730 523 636 4.0E-51 T 14-10-2018 IM40_02310 7301f78dce34d6c8f562d0a2f7d5f23d 832 SUPERFAMILY SSF52540 422 761 1.15E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02310 7301f78dce34d6c8f562d0a2f7d5f23d 832 Gene3D G3DSA:3.40.50.300 455 769 4.0E-51 T 14-10-2018 IM40_02310 7301f78dce34d6c8f562d0a2f7d5f23d 832 Pfam PF12846 AAA-like domain 465 720 1.2E-10 T 14-10-2018 IM40_11450 9b60e57cd1fbbfe6060ee982b2aa7e3f 324 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 18 322 1.1E-25 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA IM40_11450 9b60e57cd1fbbfe6060ee982b2aa7e3f 324 Pfam PF04754 Putative transposase, YhgA-like 18 216 2.7E-52 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 48 64 3.0E-20 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 81 94 3.0E-20 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 94 109 3.0E-20 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 81 3.0E-20 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 Gene3D G3DSA:2.30.330.10 34 123 5.6E-28 T 14-10-2018 IPR036429 SpoA-like superfamily IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 SUPERFAMILY SSF101801 46 119 4.71E-22 T 14-10-2018 IPR036429 SpoA-like superfamily IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 48 118 3.3E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) IM40_01840 cadb3208f3c0e63a022d6041650f8688 123 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 46 119 7.4E-27 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 Pfam PF03466 LysR substrate binding domain 92 291 7.8E-23 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 Gene3D G3DSA:3.40.190.290 93 292 7.9E-33 T 14-10-2018 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 SUPERFAMILY SSF46785 1 111 2.72E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 SUPERFAMILY SSF53850 91 294 5.0E-30 T 14-10-2018 IM40_10025 315d3dce33d3fc8f3a1782c733656259 295 Gene3D G3DSA:1.10.10.10 2 91 9.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06355 b7f3c52ca740cd30c29198fccbd9c282 123 SMART SM01409 8 60 1.6E-12 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IM40_06355 b7f3c52ca740cd30c29198fccbd9c282 123 Gene3D G3DSA:3.90.940.10 1 122 3.3E-22 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IM40_06355 b7f3c52ca740cd30c29198fccbd9c282 123 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.977 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06355 b7f3c52ca740cd30c29198fccbd9c282 123 SUPERFAMILY SSF63562 1 81 2.88E-20 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IM40_06355 b7f3c52ca740cd30c29198fccbd9c282 123 Pfam PF01192 RNA polymerase Rpb6 8 58 3.7E-13 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IM40_06355 b7f3c52ca740cd30c29198fccbd9c282 123 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.1E-17 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Gene3D G3DSA:3.10.20.310 148 238 1.6E-21 T 14-10-2018 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Gene3D G3DSA:3.10.20.310 311 395 6.1E-25 T 14-10-2018 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Pfam PF01103 Surface antigen 420 727 1.0E-71 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Gene3D G3DSA:2.40.160.50 396 727 1.5E-88 T 14-10-2018 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Pfam PF07244 Surface antigen variable number repeat 320 392 4.2E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Pfam PF07244 Surface antigen variable number repeat 1 65 2.7E-9 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Pfam PF07244 Surface antigen variable number repeat 68 144 1.2E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Pfam PF07244 Surface antigen variable number repeat 148 235 8.7E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Pfam PF07244 Surface antigen variable number repeat 239 317 3.3E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IM40_07700 122f00d09eba76a755c3e4c898015841 727 PIRSF PIRSF006076 1 727 5.1E-234 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Gene3D G3DSA:3.10.20.310 239 310 2.9E-13 T 14-10-2018 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 727 22.43 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 IM40_07700 122f00d09eba76a755c3e4c898015841 727 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 1 727 2.4E-227 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Gene3D G3DSA:3.10.20.310 67 145 2.7E-17 T 14-10-2018 IM40_07700 122f00d09eba76a755c3e4c898015841 727 Gene3D G3DSA:3.10.20.310 1 66 9.5E-18 T 14-10-2018 IM40_00390 60daca2fc1a39b58298d46f2829e8389 260 Gene3D G3DSA:3.80.10.10 53 258 1.4E-28 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_00390 60daca2fc1a39b58298d46f2829e8389 260 Pfam PF13516 Leucine Rich repeat 154 175 0.24 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_00390 60daca2fc1a39b58298d46f2829e8389 260 Pfam PF13516 Leucine Rich repeat 202 216 1.2 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_00390 60daca2fc1a39b58298d46f2829e8389 260 SUPERFAMILY SSF52047 85 251 1.16E-27 T 14-10-2018 IM40_04380 af988464c79be5f06aa7026bf478a965 395 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 2.4E-8 T 14-10-2018 IM40_04380 af988464c79be5f06aa7026bf478a965 395 PRINTS PR01036 Tetracycline resistance protein TetB signature 280 304 2.4E-8 T 14-10-2018 IM40_04380 af988464c79be5f06aa7026bf478a965 395 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 2.4E-8 T 14-10-2018 IM40_04380 af988464c79be5f06aa7026bf478a965 395 Gene3D G3DSA:1.20.1720.10 8 387 1.7E-77 T 14-10-2018 IM40_04380 af988464c79be5f06aa7026bf478a965 395 Pfam PF07690 Major Facilitator Superfamily 11 354 5.4E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_04380 af988464c79be5f06aa7026bf478a965 395 SUPERFAMILY SSF103473 8 391 5.36E-58 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_06325 54d100f2071dcb4fac215a21830fe50f 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 156 162 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IM40_06325 54d100f2071dcb4fac215a21830fe50f 275 Gene3D G3DSA:3.40.50.150 1 275 1.2E-97 T 14-10-2018 IM40_06325 54d100f2071dcb4fac215a21830fe50f 275 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 271 8.1E-79 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 IM40_06325 54d100f2071dcb4fac215a21830fe50f 275 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 261 38.317 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 IM40_06325 54d100f2071dcb4fac215a21830fe50f 275 SUPERFAMILY SSF53335 8 266 3.01E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_04800 c807740980520f994e6851b0431821d7 462 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 9 455 1.2E-146 T 14-10-2018 IM40_04800 c807740980520f994e6851b0431821d7 462 SMART SM00729 163 383 9.3E-58 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IM40_04800 c807740980520f994e6851b0431821d7 462 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 8 456 69.814 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 IM40_04800 c807740980520f994e6851b0431821d7 462 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 452 2.4E-146 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 IM40_04800 c807740980520f994e6851b0431821d7 462 Pfam PF04055 Radical SAM superfamily 168 341 2.8E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IM40_04800 c807740980520f994e6851b0431821d7 462 Gene3D G3DSA:3.80.30.20 161 397 1.6E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IM40_04800 c807740980520f994e6851b0431821d7 462 Pfam PF00919 Uncharacterized protein family UPF0004 9 112 5.3E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 IM40_04800 c807740980520f994e6851b0431821d7 462 Gene3D G3DSA:3.40.50.12160 8 135 7.0E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily IM40_04800 c807740980520f994e6851b0431821d7 462 SUPERFAMILY SSF102114 145 388 7.06E-59 T 14-10-2018 IM40_04800 c807740980520f994e6851b0431821d7 462 Pfam PF01938 TRAM domain 395 455 4.3E-9 T 14-10-2018 IPR002792 TRAM domain IM40_03775 311d38d42014c7917a23de32d7c9812b 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.5E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 Gene3D G3DSA:4.10.520.10 1 91 3.3E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.5E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.5E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.5E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 SMART SM00411 1 90 2.2E-44 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_03775 311d38d42014c7917a23de32d7c9812b 91 SUPERFAMILY SSF47729 1 90 5.45E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 ProSitePatterns PS00449 ATP synthase a subunit signature. 169 178 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 Gene3D G3DSA:1.20.120.220 77 240 2.3E-34 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 Pfam PF00119 ATP synthase A chain 29 233 9.4E-61 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 Hamap MF_01393 ATP synthase subunit a [atpB]. 5 240 16.52 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 4 236 4.8E-71 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 PRINTS PR00123 ATP synthase A subunit signature 166 188 9.7E-31 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 PRINTS PR00123 ATP synthase A subunit signature 85 101 9.7E-31 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 PRINTS PR00123 ATP synthase A subunit signature 146 161 9.7E-31 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 PRINTS PR00123 ATP synthase A subunit signature 220 235 9.7E-31 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_00690 0e069ab24cea3e5e106150ccf9b24879 240 SUPERFAMILY SSF81336 77 233 3.14E-47 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_10295 68ed64c65546375dd1389153c9dc0fa5 205 SUPERFAMILY SSF53098 34 155 4.3E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10295 68ed64c65546375dd1389153c9dc0fa5 205 Pfam PF13610 DDE domain 37 176 3.0E-50 T 14-10-2018 IPR032874 DDE domain IM40_02110 d7f397c4e5797d896225a987d6f38821 64 Gene3D G3DSA:3.30.1390.20 4 62 1.1E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IM40_02110 d7f397c4e5797d896225a987d6f38821 64 SUPERFAMILY SSF55129 6 62 1.19E-18 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IM40_02110 d7f397c4e5797d896225a987d6f38821 64 PIRSF PIRSF002211 3 63 1.1E-21 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02110 d7f397c4e5797d896225a987d6f38821 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 5 62 17.987 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02110 d7f397c4e5797d896225a987d6f38821 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 62 3.6E-22 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02110 d7f397c4e5797d896225a987d6f38821 64 Pfam PF00327 Ribosomal protein L30p/L7e 9 57 3.3E-15 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IM40_05895 69a6ee87ed2aee6b77d70a860c0f56b3 475 Pfam PF00854 POT family 105 429 3.1E-37 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 IM40_05895 69a6ee87ed2aee6b77d70a860c0f56b3 475 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 461 3.0E-64 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 IM40_05895 69a6ee87ed2aee6b77d70a860c0f56b3 475 Gene3D G3DSA:1.20.1250.20 7 472 1.0E-81 T 14-10-2018 IM40_05895 69a6ee87ed2aee6b77d70a860c0f56b3 475 SUPERFAMILY SSF103473 19 466 4.01E-19 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_03780 bf8e466ed69c9dc104becad2a0010303 819 SUPERFAMILY SSF52047 546 753 1.31E-9 T 14-10-2018 IM40_03780 bf8e466ed69c9dc104becad2a0010303 819 SUPERFAMILY SSF52047 331 529 2.62E-9 T 14-10-2018 IM40_03780 bf8e466ed69c9dc104becad2a0010303 819 Gene3D G3DSA:3.80.10.10 532 769 3.0E-8 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_03780 bf8e466ed69c9dc104becad2a0010303 819 Gene3D G3DSA:3.80.10.10 395 531 1.2E-6 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 Pfam PF14566 Inositol hexakisphosphate 137 210 5.3E-15 T 14-10-2018 IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 SUPERFAMILY SSF52799 49 228 4.08E-23 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 Gene3D G3DSA:3.90.190.10 34 277 5.1E-59 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 ProDom PD069361 HYDROLASE VIRULENCE PLASMID AVRBS1.1 HEXAPHOSPHATE TYROSINE PHOSPHOHYDROLASE PRECURSOR MYO-INOSITOL AVIRULENCE 183 276 5.0E-12 T 14-10-2018 IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 SMART SM01301 86 211 3.1E-15 T 14-10-2018 IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 Gene3D G3DSA:3.30.70.1690 91 144 5.1E-59 T 14-10-2018 IM40_06825 4c0e97a6fd1c6fc148717c9437636383 290 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 191 201 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Gene3D G3DSA:3.40.50.300 94 379 1.6E-131 T 14-10-2018 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 8.5E-77 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 4.6E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 3.3E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 51.269 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 508 8.8E-250 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 PIRSF PIRSF039088 1 509 1.4E-270 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 SUPERFAMILY SSF52540 96 378 5.02E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 SUPERFAMILY SSF47917 381 508 2.33E-42 T 14-10-2018 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Gene3D G3DSA:1.20.150.20 380 509 5.1E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 Gene3D G3DSA:2.40.30.20 1 93 1.4E-37 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_05080 ccf9b3d6c14cfdb7047e3cb4514e74ae 509 SUPERFAMILY SSF50615 10 94 4.19E-29 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 PIRSF PIRSF015601 4 240 2.8E-56 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 6 236 4.2E-39 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 Gene3D G3DSA:3.40.1280.10 74 239 2.0E-45 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 Gene3D G3DSA:2.40.240.20 5 72 3.2E-20 T 14-10-2018 IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 Pfam PF04452 RNA methyltransferase 20 234 3.7E-53 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 SUPERFAMILY SSF75217 76 236 2.72E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases IM40_04210 53aa1456d7405fdd7055718f43dd48b3 243 SUPERFAMILY SSF88697 5 71 2.73E-14 T 14-10-2018 IPR015947 PUA-like superfamily IM40_05490 7a86b462bce3804f3ab61a6703620a34 263 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 263 16.766 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 IM40_05490 7a86b462bce3804f3ab61a6703620a34 263 Pfam PF02673 Bacitracin resistance protein BacA 7 258 2.2E-76 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 IM40_00675 451066de729962f6e185af2e3360459d 161 Pfam PF00430 ATP synthase B/B' CF(0) 6 134 3.7E-16 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 IM40_00675 451066de729962f6e185af2e3360459d 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 136 9.997 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 IM40_04900 b7514c129cf54bface1f70d50caf55bf 95 Pfam PF00830 Ribosomal L28 family 3 59 3.8E-22 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04900 b7514c129cf54bface1f70d50caf55bf 95 SUPERFAMILY SSF143800 1 83 7.46E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04900 b7514c129cf54bface1f70d50caf55bf 95 Gene3D G3DSA:2.30.170.40 2 76 3.4E-26 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04900 b7514c129cf54bface1f70d50caf55bf 95 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.1E-22 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04900 b7514c129cf54bface1f70d50caf55bf 95 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 19.807 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_11375 1e1e62fd39251efb2cfe5e0fc2ad83c0 142 Pfam PF01850 PIN domain 10 132 2.5E-13 T 14-10-2018 IPR002716 PIN domain IM40_11375 1e1e62fd39251efb2cfe5e0fc2ad83c0 142 Gene3D G3DSA:3.40.50.1010 2 133 1.8E-12 T 14-10-2018 IM40_11375 1e1e62fd39251efb2cfe5e0fc2ad83c0 142 SUPERFAMILY SSF88723 10 129 1.04E-21 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 Gene3D G3DSA:3.40.50.620 4 218 8.9E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 SUPERFAMILY SSF52402 12 253 2.21E-51 T 14-10-2018 IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 Gene3D G3DSA:2.30.30.280 224 285 4.1E-18 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 Pfam PF03054 tRNA methyl transferase 15 364 3.4E-119 T 14-10-2018 IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 14 365 40.281 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 15 364 1.2E-100 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 IM40_01025 a48c6eba35ae01caa1fd586e82d6df0b 375 Gene3D G3DSA:2.40.30.10 286 370 1.0E-21 T 14-10-2018 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PIRSF PIRSF000724 1 397 4.4E-135 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 Gene3D G3DSA:3.40.50.1260 8 391 6.7E-143 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 Pfam PF00162 Phosphoglycerate kinase 7 383 9.6E-137 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 393 36.71 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 Gene3D G3DSA:3.40.50.1260 169 383 6.7E-143 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 309 334 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 2.2E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07085 72a16b578d8387facab35c747f3bc12c 399 SUPERFAMILY SSF53748 4 392 2.36E-135 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_03030 702b57814949e1d3c20a9a803a8f4203 225 Gene3D G3DSA:3.40.50.300 3 225 7.2E-58 T 14-10-2018 IM40_03030 702b57814949e1d3c20a9a803a8f4203 225 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_03030 702b57814949e1d3c20a9a803a8f4203 225 Pfam PF00005 ABC transporter 25 173 7.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_03030 702b57814949e1d3c20a9a803a8f4203 225 SUPERFAMILY SSF52540 5 223 3.38E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03030 702b57814949e1d3c20a9a803a8f4203 225 SMART SM00382 34 222 8.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04615 58226383f925581c159a8e35d6aa21a5 285 Pfam PF05175 Methyltransferase small domain 99 198 2.1E-13 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 IM40_04615 58226383f925581c159a8e35d6aa21a5 285 Gene3D G3DSA:3.40.50.150 84 285 2.9E-50 T 14-10-2018 IM40_04615 58226383f925581c159a8e35d6aa21a5 285 Gene3D G3DSA:1.10.8.10 3 83 2.9E-15 T 14-10-2018 IM40_04615 58226383f925581c159a8e35d6aa21a5 285 SUPERFAMILY SSF53335 4 277 5.14E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_04615 58226383f925581c159a8e35d6aa21a5 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 277 1.6E-71 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 IM40_04615 58226383f925581c159a8e35d6aa21a5 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IM40_04615 58226383f925581c159a8e35d6aa21a5 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 263 2.8E-55 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 IM40_03050 46e70520aa92e6dd23769dea3364367a 416 Pfam PF17289 Terminase RNaseH-like domain 255 400 9.8E-12 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like IM40_03050 46e70520aa92e6dd23769dea3364367a 416 Pfam PF03237 Terminase-like family 37 235 2.0E-23 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type IM40_03050 46e70520aa92e6dd23769dea3364367a 416 Gene3D G3DSA:3.40.50.300 9 181 2.1E-19 T 14-10-2018 IM40_08470 6d18381132131e6548f972e66449791a 66 Gene3D G3DSA:1.10.1710.10 1 63 4.0E-15 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_08470 6d18381132131e6548f972e66449791a 66 Pfam PF04352 ProQ/FINO family 1 59 1.9E-14 T 14-10-2018 IPR016103 ProQ/FinO domain IM40_08470 6d18381132131e6548f972e66449791a 66 SUPERFAMILY SSF48657 1 52 6.28E-14 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_08045 6d18381132131e6548f972e66449791a 66 Gene3D G3DSA:1.10.1710.10 1 63 4.0E-15 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_08045 6d18381132131e6548f972e66449791a 66 Pfam PF04352 ProQ/FINO family 1 59 1.9E-14 T 14-10-2018 IPR016103 ProQ/FinO domain IM40_08045 6d18381132131e6548f972e66449791a 66 SUPERFAMILY SSF48657 1 52 6.28E-14 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 SUPERFAMILY SSF56053 1 82 1.23E-23 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 Gene3D G3DSA:3.90.930.12 1 82 9.1E-27 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 Gene3D G3DSA:3.90.930.12 83 177 2.4E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.323 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 SUPERFAMILY SSF56053 83 177 2.39E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 PIRSF PIRSF002162 1 177 2.4E-50 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.6E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.6E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.6E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.1E-72 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 Pfam PF00347 Ribosomal protein L6 11 82 1.1E-15 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02095 f85eaa7c3e393efcef49e4da500e0a3c 177 Pfam PF00347 Ribosomal protein L6 91 164 2.3E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_04580 daea4f6b09913136538c0f4ef02cff2b 344 Pfam PF12146 Serine aminopeptidase, S33 32 287 1.9E-43 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 IM40_04580 daea4f6b09913136538c0f4ef02cff2b 344 Gene3D G3DSA:3.40.50.1820 3 305 9.8E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_04580 daea4f6b09913136538c0f4ef02cff2b 344 SUPERFAMILY SSF53474 9 303 1.99E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_07265 1ade823380df3e4faaedcc0bfbb3816d 161 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 120 136 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07265 1ade823380df3e4faaedcc0bfbb3816d 161 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 39 148 7.1E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07265 1ade823380df3e4faaedcc0bfbb3816d 161 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 13 153 1.3E-76 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07265 1ade823380df3e4faaedcc0bfbb3816d 161 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 2 153 42.226 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07265 1ade823380df3e4faaedcc0bfbb3816d 161 Gene3D G3DSA:3.40.50.12280 2 161 3.3E-80 T 14-10-2018 IM40_07265 1ade823380df3e4faaedcc0bfbb3816d 161 SUPERFAMILY SSF56770 11 156 1.11E-67 T 14-10-2018 IM40_06245 e7dfce562d5620790137b99a21176682 62 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 9 60 1.4E-16 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_06245 e7dfce562d5620790137b99a21176682 62 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 9 62 3.7E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IM40_06245 e7dfce562d5620790137b99a21176682 62 Gene3D G3DSA:1.20.5.1030 4 60 1.6E-15 T 14-10-2018 IPR038379 SecE superfamily IM40_06245 e7dfce562d5620790137b99a21176682 62 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 9 37 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_06245 e7dfce562d5620790137b99a21176682 62 PRINTS PR01650 Bacterial translocase SecE signature 3 23 5.4E-5 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IM40_06245 e7dfce562d5620790137b99a21176682 62 PRINTS PR01650 Bacterial translocase SecE signature 47 62 5.4E-5 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IM40_06245 e7dfce562d5620790137b99a21176682 62 PRINTS PR01650 Bacterial translocase SecE signature 27 47 5.4E-5 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IM40_06245 e7dfce562d5620790137b99a21176682 62 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 10.805 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_00900 aa83e5ee66df3c4991a87a5398bf6b9d 438 Pfam PF07690 Major Facilitator Superfamily 12 392 3.9E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_00900 aa83e5ee66df3c4991a87a5398bf6b9d 438 SUPERFAMILY SSF103473 5 430 3.53E-36 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_00900 aa83e5ee66df3c4991a87a5398bf6b9d 438 Gene3D G3DSA:1.20.1250.20 238 433 1.0E-13 T 14-10-2018 IM40_00900 aa83e5ee66df3c4991a87a5398bf6b9d 438 Gene3D G3DSA:1.20.1250.20 3 203 2.1E-9 T 14-10-2018 IM40_02680 432361dffdfddc01522fdfcab214b3ce 405 PIRSF PIRSF003085 2 398 4.7E-130 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 IM40_02680 432361dffdfddc01522fdfcab214b3ce 405 SUPERFAMILY SSF53335 120 380 1.53E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02680 432361dffdfddc01522fdfcab214b3ce 405 Gene3D G3DSA:3.40.50.150 118 384 2.9E-95 T 14-10-2018 IM40_02680 432361dffdfddc01522fdfcab214b3ce 405 Pfam PF02353 Mycolic acid cyclopropane synthetase 113 376 1.3E-85 T 14-10-2018 IM40_07250 b170dbe03ae14715bfa7c360ca81e4a5 288 Pfam PF00892 EamA-like transporter family 13 143 6.8E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_07250 b170dbe03ae14715bfa7c360ca81e4a5 288 Pfam PF00892 EamA-like transporter family 153 283 2.7E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_07250 b170dbe03ae14715bfa7c360ca81e4a5 288 SUPERFAMILY SSF103481 46 147 4.84E-11 T 14-10-2018 IM40_07250 b170dbe03ae14715bfa7c360ca81e4a5 288 SUPERFAMILY SSF103481 188 287 2.22E-15 T 14-10-2018 IM40_05040 3d13a71802508bc156061f932521e3c0 167 Pfam PF10722 Putative bacterial sensory transduction regulator 16 144 5.3E-21 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN IM40_02740 b7cc5890e68b9f922f20157e0feb9d37 191 SUPERFAMILY SSF81901 92 185 6.02E-8 T 14-10-2018 IM40_02740 b7cc5890e68b9f922f20157e0feb9d37 191 Gene3D G3DSA:1.25.40.10 77 191 3.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 SUPERFAMILY SSF52964 32 166 1.07E-34 T 14-10-2018 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 438 4.9E-130 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Pfam PF04052 TolB amino-terminal domain 28 134 1.7E-30 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 SUPERFAMILY SSF69304 161 439 1.7E-55 T 14-10-2018 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 11 437 44.337 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Gene3D G3DSA:3.40.50.10070 23 169 3.8E-37 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Gene3D G3DSA:2.120.10.30 170 442 5.8E-74 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Pfam PF07676 WD40-like Beta Propeller Repeat 385 413 0.0015 T 14-10-2018 IPR011659 WD40-like Beta Propeller IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Pfam PF07676 WD40-like Beta Propeller Repeat 290 325 1.2E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller IM40_03095 bf8180c4478f38cbd5e1855552de24b0 442 Pfam PF07676 WD40-like Beta Propeller Repeat 335 367 3.6E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Pfam PF03448 MgtE intracellular N domain 47 148 2.9E-19 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Pfam PF00571 CBS domain 150 208 0.0071 T 14-10-2018 IPR000644 CBS domain IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Pfam PF00571 CBS domain 214 268 8.4E-8 T 14-10-2018 IPR000644 CBS domain IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 SMART SM00924 47 150 1.0E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Gene3D G3DSA:1.10.357.20 286 461 1.8E-47 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 SUPERFAMILY SSF161093 289 461 7.59E-43 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 SUPERFAMILY SSF54631 150 283 2.02E-29 T 14-10-2018 IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 SUPERFAMILY SSF158791 21 146 4.19E-24 T 14-10-2018 IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Gene3D G3DSA:1.25.60.10 21 145 3.6E-19 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 TIGRFAM TIGR00400 mgtE: magnesium transporter 22 461 2.5E-95 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 SMART SM00116 221 269 4.6E-5 T 14-10-2018 IPR000644 CBS domain IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Gene3D G3DSA:3.10.580.10 147 273 3.2E-39 T 14-10-2018 IM40_05755 6a40cb985b6192cae390f18bced03bb3 462 Pfam PF01769 Divalent cation transporter 335 454 1.3E-25 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 IM40_07445 3e6d70ce040d43c9881cb8d7549428e0 110 Gene3D G3DSA:3.30.920.10 2 110 1.4E-20 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IM40_07445 3e6d70ce040d43c9881cb8d7549428e0 110 SUPERFAMILY SSF55387 3 106 2.44E-23 T 14-10-2018 IM40_07445 3e6d70ce040d43c9881cb8d7549428e0 110 SMART SM01219 2 110 3.5E-23 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IM40_07445 3e6d70ce040d43c9881cb8d7549428e0 110 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 4 108 3.9E-18 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IM40_07445 3e6d70ce040d43c9881cb8d7549428e0 110 Pfam PF01491 Frataxin-like domain 4 104 1.2E-21 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IM40_06955 d2a89dd1eac3f1f222c5dc6cefaa44ae 161 Gene3D G3DSA:3.40.50.300 2 151 4.0E-36 T 14-10-2018 IM40_06955 d2a89dd1eac3f1f222c5dc6cefaa44ae 161 SUPERFAMILY SSF52540 24 113 5.97E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06955 d2a89dd1eac3f1f222c5dc6cefaa44ae 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 127 5.1E-35 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 IM40_06955 d2a89dd1eac3f1f222c5dc6cefaa44ae 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 132 6.6E-31 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 IM40_11330 b670c960ab43230ccb71de36ff7bbb51 2406 Pfam PF04830 Possible hemagglutinin (DUF637) 2038 2191 3.8E-9 T 14-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative IM40_11330 b670c960ab43230ccb71de36ff7bbb51 2406 Pfam PF15605 Bacterial toxin 28 2323 2401 4.6E-9 T 14-10-2018 IPR028948 Bacterial toxin 28 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 Pfam PF01336 OB-fold nucleic acid binding domain 64 139 9.0E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 SUPERFAMILY SSF50249 11 148 2.47E-36 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 208 224 2.3E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 192 202 2.3E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 2.3E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 379 395 2.3E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 2.3E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 Gene3D G3DSA:3.30.930.10 151 498 4.4E-128 T 14-10-2018 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 494 8.2E-79 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 Gene3D G3DSA:2.40.50.140 7 150 2.4E-43 T 14-10-2018 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 497 42.024 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 SUPERFAMILY SSF55681 155 495 2.4E-114 T 14-10-2018 IM40_07510 54fb2fa4fac2281915bb612daa988e81 498 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 497 4.6E-192 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IM40_03855 1afb1ed0bc15cd7d956b6e119b2bf75e 90 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 81 4.5E-12 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_03855 1afb1ed0bc15cd7d956b6e119b2bf75e 90 Gene3D G3DSA:3.30.2310.20 2 83 7.7E-18 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_03855 1afb1ed0bc15cd7d956b6e119b2bf75e 90 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 8 80 7.2E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_01995 cf00b06532f10134db1828a11e12a35e 123 Pfam PF00164 Ribosomal protein S12/S23 16 123 1.0E-41 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 Gene3D G3DSA:2.40.50.140 1 123 1.3E-62 T 14-10-2018 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.602 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.3E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 SUPERFAMILY SSF50249 2 123 2.06E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PIRSF PIRSF002133 1 123 1.2E-53 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.4E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.4E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.4E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.4E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.4E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01995 cf00b06532f10134db1828a11e12a35e 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.4E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 SUPERFAMILY SSF46946 2 121 9.86E-47 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 Gene3D G3DSA:4.10.910.10 73 122 3.4E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.8E-31 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.8E-54 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 Gene3D G3DSA:1.10.8.50 1 72 8.8E-29 T 14-10-2018 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 PIRSF PIRSF002134 1 122 8.3E-45 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02130 7ce0463f75665443c8abe42652f38c4a 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.5 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_07615 14c01095ca2664e9b87501952d314c03 259 Gene3D G3DSA:3.40.1210.10 9 258 7.1E-89 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IM40_07615 14c01095ca2664e9b87501952d314c03 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 10 246 1.1E-68 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IM40_07615 14c01095ca2664e9b87501952d314c03 259 SUPERFAMILY SSF64167 9 255 2.22E-79 T 14-10-2018 IM40_07615 14c01095ca2664e9b87501952d314c03 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 9 259 37.514 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IM40_07615 14c01095ca2664e9b87501952d314c03 259 Pfam PF01975 Survival protein SurE 11 193 1.7E-57 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IM40_07235 030597fc601047e37fb9630385c5a013 389 Gene3D G3DSA:3.40.50.261 240 388 7.3E-58 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_07235 030597fc601047e37fb9630385c5a013 389 Pfam PF00549 CoA-ligase 262 382 1.5E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_07235 030597fc601047e37fb9630385c5a013 389 Pfam PF08442 ATP-grasp domain 2 202 3.4E-73 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_07235 030597fc601047e37fb9630385c5a013 389 SUPERFAMILY SSF52210 240 385 7.46E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_07235 030597fc601047e37fb9630385c5a013 389 Gene3D G3DSA:3.30.1490.20 21 104 3.0E-90 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IM40_07235 030597fc601047e37fb9630385c5a013 389 SUPERFAMILY SSF56059 1 238 2.16E-75 T 14-10-2018 IM40_07235 030597fc601047e37fb9630385c5a013 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.138 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_07235 030597fc601047e37fb9630385c5a013 389 Gene3D G3DSA:3.30.470.20 1 234 3.0E-90 T 14-10-2018 IM40_07235 030597fc601047e37fb9630385c5a013 389 PIRSF PIRSF001554 1 387 4.4E-148 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_07235 030597fc601047e37fb9630385c5a013 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.5E-159 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IM40_07235 030597fc601047e37fb9630385c5a013 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 SUPERFAMILY SSF50156 88 166 9.18E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 Pfam PF03572 Peptidase family S41 191 358 1.4E-55 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 Gene3D G3DSA:3.30.750.44 42 334 1.9E-93 T 14-10-2018 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 Pfam PF13180 PDZ domain 95 165 3.7E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 SMART SM00228 95 166 1.6E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 Gene3D G3DSA:2.30.42.10 95 181 1.9E-93 T 14-10-2018 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 48 376 1.7E-103 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 SMART SM00245 167 359 7.0E-78 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 Gene3D G3DSA:3.90.226.10 182 356 1.9E-93 T 14-10-2018 IM40_03400 c42f92d2c131d9983e6fa54dfa2ad6f8 449 SUPERFAMILY SSF52096 38 369 1.09E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_00630 a11c5870d85d30c49c16f2e2919afc96 152 SUPERFAMILY SSF49764 13 138 3.45E-22 T 14-10-2018 IPR008978 HSP20-like chaperone IM40_00630 a11c5870d85d30c49c16f2e2919afc96 152 Pfam PF00011 Hsp20/alpha crystallin family 43 138 7.3E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain IM40_00630 a11c5870d85d30c49c16f2e2919afc96 152 Gene3D G3DSA:2.60.40.790 35 140 1.7E-23 T 14-10-2018 IPR008978 HSP20-like chaperone IM40_02000 f89f8002757801456f212fafe87cb0dc 156 SUPERFAMILY SSF47973 6 149 1.57E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily IM40_02000 f89f8002757801456f212fafe87cb0dc 156 Gene3D G3DSA:1.10.455.10 2 156 1.6E-62 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily IM40_02000 f89f8002757801456f212fafe87cb0dc 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.054 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 IM40_02000 f89f8002757801456f212fafe87cb0dc 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.2E-69 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 IM40_02000 f89f8002757801456f212fafe87cb0dc 156 PIRSF PIRSF002122 2 156 2.0E-59 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 IM40_02000 f89f8002757801456f212fafe87cb0dc 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.3E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain IM40_02000 f89f8002757801456f212fafe87cb0dc 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_09210 c6381d2b694d8663ee4a4ff200c7b7e6 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 2.0E-17 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_09210 c6381d2b694d8663ee4a4ff200c7b7e6 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.3E-21 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_09210 c6381d2b694d8663ee4a4ff200c7b7e6 88 SUPERFAMILY SSF46992 3 86 1.96E-26 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_09210 c6381d2b694d8663ee4a4ff200c7b7e6 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.893 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_09210 c6381d2b694d8663ee4a4ff200c7b7e6 88 Pfam PF01649 Ribosomal protein S20 2 84 1.5E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_09210 c6381d2b694d8663ee4a4ff200c7b7e6 88 Gene3D G3DSA:1.20.58.110 1 87 3.3E-25 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_03185 4e092af23cc50f3b76c2581e636f6b62 138 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.2E-23 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03185 4e092af23cc50f3b76c2581e636f6b62 138 Pfam PF01250 Ribosomal protein S6 3 91 4.3E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03185 4e092af23cc50f3b76c2581e636f6b62 138 Gene3D G3DSA:3.30.70.60 1 102 9.9E-30 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IM40_03185 4e092af23cc50f3b76c2581e636f6b62 138 SUPERFAMILY SSF54995 1 103 2.88E-32 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03185 4e092af23cc50f3b76c2581e636f6b62 138 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.353 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 IM40_09520 dea379b2555192d77db21c58627ea64d 277 Pfam PF00665 Integrase core domain 110 224 2.2E-28 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_09520 dea379b2555192d77db21c58627ea64d 277 Pfam PF13276 HTH-like domain 31 85 1.2E-15 T 14-10-2018 IPR025948 HTH-like domain IM40_09520 dea379b2555192d77db21c58627ea64d 277 SUPERFAMILY SSF53098 103 268 2.28E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_09520 dea379b2555192d77db21c58627ea64d 277 Gene3D G3DSA:3.30.420.10 106 269 2.1E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 Pfam PF00733 Asparagine synthase 259 624 1.7E-58 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 568 2.5E-120 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 Pfam PF13537 Glutamine amidotransferase domain 64 182 1.3E-39 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 Gene3D G3DSA:3.60.20.10 12 202 7.3E-52 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 PIRSF PIRSF001589 1 639 1.4E-114 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 SUPERFAMILY SSF56235 2 242 8.58E-47 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_00090 e95d90dec569d8e3435ceb62c1a56917 640 SUPERFAMILY SSF52402 239 630 2.12E-49 T 14-10-2018 IM40_06885 6443818e2e2852116fa178472646bd17 422 SUPERFAMILY SSF52374 7 327 1.41E-97 T 14-10-2018 IM40_06885 6443818e2e2852116fa178472646bd17 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 419 42.851 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 IM40_06885 6443818e2e2852116fa178472646bd17 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 418 2.2E-109 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IM40_06885 6443818e2e2852116fa178472646bd17 422 SUPERFAMILY SSF55174 335 418 1.61E-12 T 14-10-2018 IM40_06885 6443818e2e2852116fa178472646bd17 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 1.3E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IM40_06885 6443818e2e2852116fa178472646bd17 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 1.3E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IM40_06885 6443818e2e2852116fa178472646bd17 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 1.3E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IM40_06885 6443818e2e2852116fa178472646bd17 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 1.3E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IM40_06885 6443818e2e2852116fa178472646bd17 422 Gene3D G3DSA:3.40.50.620 2 228 1.2E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_06885 6443818e2e2852116fa178472646bd17 422 Pfam PF00579 tRNA synthetases class I (W and Y) 37 327 1.6E-76 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_06885 6443818e2e2852116fa178472646bd17 422 Gene3D G3DSA:3.10.290.10 332 420 2.2E-13 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IM40_06885 6443818e2e2852116fa178472646bd17 422 Gene3D G3DSA:1.10.240.10 229 331 3.1E-34 T 14-10-2018 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 Gene3D G3DSA:3.30.70.270 16 168 9.4E-42 T 14-10-2018 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 Gene3D G3DSA:2.30.40.20 24 87 9.4E-42 T 14-10-2018 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 Pfam PF13438 Domain of unknown function (DUF4113) 377 427 8.5E-17 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 Pfam PF00817 impB/mucB/samB family 19 163 4.9E-37 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 SUPERFAMILY SSF56672 14 246 2.58E-67 T 14-10-2018 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 Gene3D G3DSA:1.10.150.20 188 240 5.1E-6 T 14-10-2018 IM40_10175 4d213f2474a29c931bfc89a93b127836 428 Pfam PF11799 impB/mucB/samB family C-terminal domain 249 362 1.1E-9 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 Gene3D G3DSA:3.30.70.270 4 156 1.8E-43 T 14-10-2018 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 Gene3D G3DSA:2.30.40.20 12 75 1.8E-43 T 14-10-2018 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 Pfam PF00817 impB/mucB/samB family 7 151 3.8E-37 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 351 8.1E-9 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 SUPERFAMILY SSF56672 2 230 4.89E-68 T 14-10-2018 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 Pfam PF13438 Domain of unknown function (DUF4113) 365 415 4.9E-16 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 SUPERFAMILY SSF100879 244 355 3.4E-5 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IM40_09345 c914eda869f3175e7d4f03d4eaeadeb5 416 Gene3D G3DSA:1.10.150.20 167 226 7.7E-6 T 14-10-2018 IM40_06585 346fb1adc60666ed6bf719274dfef93b 148 PIRSF PIRSF005384 6 148 3.1E-52 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 IM40_06585 346fb1adc60666ed6bf719274dfef93b 148 Gene3D G3DSA:3.40.1400.10 3 148 5.2E-55 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 IM40_06585 346fb1adc60666ed6bf719274dfef93b 148 Pfam PF02502 Ribose/Galactose Isomerase 8 147 2.5E-51 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 IM40_06585 346fb1adc60666ed6bf719274dfef93b 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 7 147 1.3E-48 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 IM40_06585 346fb1adc60666ed6bf719274dfef93b 148 SUPERFAMILY SSF89623 5 147 9.29E-50 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 IM40_06585 346fb1adc60666ed6bf719274dfef93b 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 8 148 2.9E-50 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 IM40_03130 a336f6b0ee21599a51d205b368051232 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 247 54.298 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_03130 a336f6b0ee21599a51d205b368051232 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_03130 a336f6b0ee21599a51d205b368051232 248 Gene3D G3DSA:3.20.20.70 1 248 4.7E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_03130 a336f6b0ee21599a51d205b368051232 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 239 1.4E-58 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_03130 a336f6b0ee21599a51d205b368051232 248 SUPERFAMILY SSF51351 6 247 3.93E-84 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_03130 a336f6b0ee21599a51d205b368051232 248 Pfam PF00121 Triosephosphate isomerase 7 245 4.1E-86 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_07885 3a268053714bf39a4ff33efdd4dd8f1c 832 Pfam PF12846 AAA-like domain 465 719 5.2E-10 T 14-10-2018 IM40_07885 3a268053714bf39a4ff33efdd4dd8f1c 832 Gene3D G3DSA:3.40.50.300 454 769 1.3E-49 T 14-10-2018 IM40_07885 3a268053714bf39a4ff33efdd4dd8f1c 832 SUPERFAMILY SSF52540 422 761 2.0E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07885 3a268053714bf39a4ff33efdd4dd8f1c 832 Gene3D G3DSA:1.10.8.730 523 636 1.3E-49 T 14-10-2018 IM40_07885 3a268053714bf39a4ff33efdd4dd8f1c 832 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 43 265 8.4E-37 T 14-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase IM40_07885 3a268053714bf39a4ff33efdd4dd8f1c 832 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 48 828 3.7E-221 T 14-10-2018 IPR014117 Type-IV secretion system protein TraC IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SUPERFAMILY SSF81901 494 618 1.2E-7 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Gene3D G3DSA:3.80.10.10 794 884 4.1E-22 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Gene3D G3DSA:1.25.40.10 470 607 5.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00671 508 543 150.0 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00671 393 429 20.0 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00671 331 367 2.3E-5 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SUPERFAMILY SSF81901 303 441 7.59E-8 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Gene3D G3DSA:3.80.10.10 694 793 1.9E-22 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF13516 Leucine Rich repeat 750 773 1.2E-5 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF13516 Leucine Rich repeat 778 801 0.0026 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF13516 Leucine Rich repeat 806 829 1.3E-6 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Gene3D G3DSA:1.25.40.10 270 456 8.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SUPERFAMILY SSF52047 626 880 4.49E-41 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00368 723 750 6.4 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00368 779 806 4.8E-5 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00368 807 834 1.6 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 SMART SM00368 751 778 1.9E-4 T 14-10-2018 IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF08238 Sel1 repeat 512 543 4.9 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF08238 Sel1 repeat 394 424 5.3 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF08238 Sel1 repeat 495 507 26.0 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09385 66dd0ed48a091818abcc0a900e410140 887 Pfam PF08238 Sel1 repeat 332 364 1.6E-5 T 14-10-2018 IPR006597 Sel1-like repeat IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 Gene3D G3DSA:3.80.10.10 510 720 5.6E-22 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SUPERFAMILY SSF52058 641 894 8.84E-27 T 14-10-2018 IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 Gene3D G3DSA:3.80.10.10 46 316 4.0E-17 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 Gene3D G3DSA:3.80.10.10 743 909 2.3E-23 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 Gene3D G3DSA:3.80.10.10 317 509 1.7E-35 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 568 593 60.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 414 439 110.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 188 213 110.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 700 725 16.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 370 395 24.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 656 681 21.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 744 769 16.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 612 637 140.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 832 857 110.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 458 483 34.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 502 527 71.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 237 262 37.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 282 307 630.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 788 813 14.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 876 905 360.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SMART SM00367 326 351 13.0 T 14-10-2018 IPR006553 Leucine-rich repeat, cysteine-containing subtype IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SUPERFAMILY SSF52058 139 446 1.12E-31 T 14-10-2018 IM40_10655 dfaff6ac012ffbc33a0c3446dade5ba9 917 SUPERFAMILY SSF52058 393 688 1.26E-29 T 14-10-2018 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 SUPERFAMILY SSF47729 1 89 2.5E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.2E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.2E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.2E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 SMART SM00411 1 90 5.5E-37 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 Gene3D G3DSA:4.10.520.10 1 90 1.8E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_05210 3a578a91645069bf58a3af22f799bcab 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 6.5E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_05380 ba6102af72319736f800f473e7d14a0f 149 Pfam PF00886 Ribosomal protein S16 9 70 2.9E-27 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05380 ba6102af72319736f800f473e7d14a0f 149 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.2E-31 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05380 ba6102af72319736f800f473e7d14a0f 149 Gene3D G3DSA:3.30.1320.10 1 148 1.8E-40 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05380 ba6102af72319736f800f473e7d14a0f 149 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.118 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05380 ba6102af72319736f800f473e7d14a0f 149 SUPERFAMILY SSF54565 3 89 2.09E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_05240 919b43828ee911b80fb6f0d722762391 356 Gene3D G3DSA:3.40.50.300 4 178 3.0E-41 T 14-10-2018 IM40_05240 919b43828ee911b80fb6f0d722762391 356 SUPERFAMILY SSF52540 11 218 8.21E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05240 919b43828ee911b80fb6f0d722762391 356 SMART SM00382 30 180 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_05240 919b43828ee911b80fb6f0d722762391 356 Pfam PF13177 DNA polymerase III, delta subunit 13 179 2.7E-36 T 14-10-2018 IM40_11365 ca59d88f747c37e9904bffdcd4469abf 234 SUPERFAMILY SSF160443 70 132 8.76E-6 T 14-10-2018 IPR036063 Smr domain superfamily IM40_11365 ca59d88f747c37e9904bffdcd4469abf 234 Gene3D G3DSA:3.30.1370.110 59 153 7.4E-6 T 14-10-2018 IM40_11365 ca59d88f747c37e9904bffdcd4469abf 234 Pfam PF01713 Smr domain 71 150 4.5E-7 T 14-10-2018 IPR002625 Smr domain IM40_07500 7cd0fc5a1b7a1abea9e738a517352f6e 211 Gene3D G3DSA:3.40.50.200 37 205 2.0E-5 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 IM40_07500 7cd0fc5a1b7a1abea9e738a517352f6e 211 SUPERFAMILY SSF52743 26 156 5.11E-10 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 IM40_10865 601693926162b7b5b2e399c0ec2d8df4 93 SUPERFAMILY SSF47413 3 68 3.75E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_10865 601693926162b7b5b2e399c0ec2d8df4 93 SMART SM00530 7 62 1.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_10865 601693926162b7b5b2e399c0ec2d8df4 93 Pfam PF01381 Helix-turn-helix 8 56 9.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_10865 601693926162b7b5b2e399c0ec2d8df4 93 Gene3D G3DSA:1.10.260.40 2 61 2.0E-16 T 14-10-2018 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 Gene3D G3DSA:1.10.287.40 1 104 3.8E-22 T 14-10-2018 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 5.0E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 5.0E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 5.0E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 5.0E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 PRINTS PR00981 Seryl-tRNA synthetase signature 349 365 5.0E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 5.9E-151 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 PIRSF PIRSF001529 1 427 5.2E-164 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 SUPERFAMILY SSF46589 1 112 1.41E-23 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 SUPERFAMILY SSF55681 116 420 2.49E-90 T 14-10-2018 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 Gene3D G3DSA:3.30.930.10 105 427 1.5E-117 T 14-10-2018 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 402 4.6E-32 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 9.8E-25 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 IM40_07620 ddcbe138b02bd5e038edb71ec3d69039 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 39.935 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IM40_09015 5a5b5b30be47a477af54d6c206f377f4 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 188 1.1E-39 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IM40_09015 5a5b5b30be47a477af54d6c206f377f4 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 11 203 23.553 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IM40_09015 5a5b5b30be47a477af54d6c206f377f4 207 SUPERFAMILY SSF53335 6 179 1.5E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_09015 5a5b5b30be47a477af54d6c206f377f4 207 Gene3D G3DSA:3.40.50.150 1 206 1.6E-49 T 14-10-2018 IM40_09015 5a5b5b30be47a477af54d6c206f377f4 207 PIRSF PIRSF003078 1 204 2.0E-42 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IM40_09015 5a5b5b30be47a477af54d6c206f377f4 207 Pfam PF02527 rRNA small subunit methyltransferase G 23 193 5.5E-46 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 SUPERFAMILY SSF82866 322 519 9.68E-47 T 14-10-2018 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 47 512 9.4E-143 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 Gene3D G3DSA:1.20.1640.10 347 523 3.3E-12 T 14-10-2018 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 Gene3D G3DSA:3.30.70.3400 145 346 1.1E-63 T 14-10-2018 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 525 43.855 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 Pfam PF02355 Protein export membrane protein 348 516 1.4E-17 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 PRINTS PR00702 Acriflavin resistance protein family signature 489 512 5.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 PRINTS PR00702 Acriflavin resistance protein family signature 414 438 5.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 PRINTS PR00702 Acriflavin resistance protein family signature 361 384 5.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 275 505 1.9E-78 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 Gene3D G3DSA:3.30.1360.200 202 343 1.1E-63 T 14-10-2018 IM40_07600 4b2a53f4c9e4d3cdf31eaae34e2c0260 526 Pfam PF07549 SecD/SecF GG Motif 39 64 1.9E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IM40_09645 2429e89b8e2295a2727c320e24b30f31 260 Gene3D G3DSA:3.40.50.300 63 249 2.1E-45 T 14-10-2018 IM40_09645 2429e89b8e2295a2727c320e24b30f31 260 SUPERFAMILY SSF52540 86 249 4.13E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09645 2429e89b8e2295a2727c320e24b30f31 260 PIRSF PIRSF003073 1 252 5.9E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_09645 2429e89b8e2295a2727c320e24b30f31 260 SMART SM00382 99 236 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_09645 2429e89b8e2295a2727c320e24b30f31 260 Pfam PF01695 IstB-like ATP binding protein 55 232 7.8E-61 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 IM40_05545 dc8fb6e30bdd5bf706d631851b617a5f 636 Gene3D G3DSA:3.40.50.720 146 276 5.5E-21 T 14-10-2018 IM40_05545 dc8fb6e30bdd5bf706d631851b617a5f 636 Pfam PF02719 Polysaccharide biosynthesis protein 295 583 7.6E-109 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain IM40_05545 dc8fb6e30bdd5bf706d631851b617a5f 636 SUPERFAMILY SSF53335 108 340 3.32E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_05545 dc8fb6e30bdd5bf706d631851b617a5f 636 Gene3D G3DSA:3.40.50.720 290 634 8.2E-111 T 14-10-2018 IM40_05545 dc8fb6e30bdd5bf706d631851b617a5f 636 SUPERFAMILY SSF51735 292 562 1.44E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 41 222 2.4E-77 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 4.0E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 200 224 4.0E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 4.0E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 4.0E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 4.0E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 4.0E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00655 a4948e13f2e4257bbd06e7e7080bc4d1 243 Pfam PF01578 Cytochrome C assembly protein 26 180 7.5E-30 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 435 28.527 T 14-10-2018 IPR026593 Protein translocase subunit SecY IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 430 3.2E-122 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PIRSF PIRSF004557 3 443 6.3E-120 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 4.4E-94 T 14-10-2018 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 Gene3D G3DSA:1.10.3370.10 13 431 5.0E-154 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 Pfam PF00344 SecY translocase 80 419 8.7E-113 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_02120 9b09b549dc06b90f5b7e6791610cec62 443 SUPERFAMILY SSF103491 15 426 2.22E-127 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IM40_04790 6cdedf6bc6c35f8764ad5ffcd2119541 147 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 10 137 21.342 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 IM40_04790 6cdedf6bc6c35f8764ad5ffcd2119541 147 SUPERFAMILY SSF55486 13 144 4.74E-44 T 14-10-2018 IM40_04790 6cdedf6bc6c35f8764ad5ffcd2119541 147 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 103 113 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site IM40_04790 6cdedf6bc6c35f8764ad5ffcd2119541 147 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 34 131 4.6E-32 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 IM40_04790 6cdedf6bc6c35f8764ad5ffcd2119541 147 Pfam PF02130 Uncharacterized protein family UPF0054 10 132 4.5E-36 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 IM40_04790 6cdedf6bc6c35f8764ad5ffcd2119541 147 Gene3D G3DSA:3.40.390.30 2 143 1.8E-41 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 IM40_06545 0b74b9c0247e36c80fec903264571d06 408 Gene3D G3DSA:1.20.1250.20 242 407 7.1E-20 T 14-10-2018 IM40_06545 0b74b9c0247e36c80fec903264571d06 408 Pfam PF07690 Major Facilitator Superfamily 262 403 1.1E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_06545 0b74b9c0247e36c80fec903264571d06 408 Pfam PF07690 Major Facilitator Superfamily 20 254 2.0E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_06545 0b74b9c0247e36c80fec903264571d06 408 SUPERFAMILY SSF103473 14 400 2.62E-52 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_06545 0b74b9c0247e36c80fec903264571d06 408 Gene3D G3DSA:1.20.1250.20 6 202 2.1E-20 T 14-10-2018 IM40_10400 4d83f6ee37fe3df2d248d148ce29ac06 341 Gene3D G3DSA:3.40.1350.10 184 308 5.1E-6 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 IM40_10400 4d83f6ee37fe3df2d248d148ce29ac06 341 Pfam PF06250 Protein of unknown function (DUF1016) 14 324 5.5E-98 T 14-10-2018 IPR009362 Protein of unknown function DUF1016 IM40_08195 836d35d611238ea07e74d4154481bc34 308 SUPERFAMILY SSF103481 196 281 1.83E-10 T 14-10-2018 IM40_08195 836d35d611238ea07e74d4154481bc34 308 Pfam PF00892 EamA-like transporter family 10 140 8.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_08195 836d35d611238ea07e74d4154481bc34 308 Pfam PF00892 EamA-like transporter family 150 277 1.7E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_08195 836d35d611238ea07e74d4154481bc34 308 SUPERFAMILY SSF103481 45 142 8.5E-12 T 14-10-2018 IM40_01155 031630af157d23589bdcaaec12bd7957 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 3.9E-32 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 IM40_01155 031630af157d23589bdcaaec12bd7957 79 Pfam PF00550 Phosphopantetheine attachment site 7 72 4.7E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain IM40_01155 031630af157d23589bdcaaec12bd7957 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site IM40_01155 031630af157d23589bdcaaec12bd7957 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 3.0E-11 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 IM40_01155 031630af157d23589bdcaaec12bd7957 79 Gene3D G3DSA:1.10.1200.10 1 79 6.9E-28 T 14-10-2018 IPR036736 ACP-like superfamily IM40_01155 031630af157d23589bdcaaec12bd7957 79 SUPERFAMILY SSF47336 2 76 3.14E-22 T 14-10-2018 IPR036736 ACP-like superfamily IM40_01155 031630af157d23589bdcaaec12bd7957 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.992 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 Hamap MF_00163 Peptide deformylase [def]. 2 164 28.792 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 PIRSF PIRSF004749 1 167 8.5E-52 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 SUPERFAMILY SSF56420 3 165 3.14E-56 T 14-10-2018 IPR036821 Peptide deformylase superfamily IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 Gene3D G3DSA:3.90.45.10 1 167 7.6E-59 T 14-10-2018 IPR036821 Peptide deformylase superfamily IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 Pfam PF01327 Polypeptide deformylase 5 154 2.5E-50 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 157 1.4E-52 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 PRINTS PR01576 Peptide deformylase signature 91 102 9.9E-34 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 PRINTS PR01576 Peptide deformylase signature 122 151 9.9E-34 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 PRINTS PR01576 Peptide deformylase signature 33 62 9.9E-34 T 14-10-2018 IPR023635 Peptide deformylase IM40_01725 8dcdbe99d771ee2ff92f77c3c034dd6b 167 PRINTS PR01576 Peptide deformylase signature 103 121 9.9E-34 T 14-10-2018 IPR023635 Peptide deformylase IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 Pfam PF01595 Domain of unknown function DUF21 8 196 6.3E-45 T 14-10-2018 IPR002550 CNNM, transmembrane domain IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 Pfam PF03471 Transporter associated domain 348 428 1.5E-20 T 14-10-2018 IPR005170 Transporter-associated domain IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 SUPERFAMILY SSF54631 202 334 2.44E-20 T 14-10-2018 IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 Gene3D G3DSA:3.10.580.10 196 343 7.7E-34 T 14-10-2018 IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 SMART SM01091 347 429 7.6E-24 T 14-10-2018 IPR005170 Transporter-associated domain IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 SUPERFAMILY SSF56176 347 426 1.06E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 Gene3D G3DSA:3.30.465.10 344 430 3.6E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_07385 781d8f5a1bbc14b016a5beb1d0690ec5 432 Pfam PF00571 CBS domain 283 331 4.6E-4 T 14-10-2018 IPR000644 CBS domain IM40_08150 fdc64fec04361732a5d4d51bd38a1cd2 73 Pfam PF13438 Domain of unknown function (DUF4113) 24 72 1.4E-17 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 IM40_06645 492cef6a10408edab711b772548f88bf 189 SUPERFAMILY SSF55144 4 182 2.46E-10 T 14-10-2018 IPR009097 Cyclic phosphodiesterase IM40_06645 492cef6a10408edab711b772548f88bf 189 Gene3D G3DSA:3.90.1140.10 2 182 1.8E-10 T 14-10-2018 IM40_06940 76a6242751e441aebea6209ae99dd658 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 17 158 5.8E-37 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IM40_06940 76a6242751e441aebea6209ae99dd658 158 SUPERFAMILY SSF51230 83 158 5.1E-24 T 14-10-2018 IPR011053 Single hybrid motif IM40_06940 76a6242751e441aebea6209ae99dd658 158 Gene3D G3DSA:2.40.50.100 81 158 1.1E-28 T 14-10-2018 IM40_06940 76a6242751e441aebea6209ae99dd658 158 Pfam PF00364 Biotin-requiring enzyme 84 157 2.5E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment IM40_06940 76a6242751e441aebea6209ae99dd658 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 104 118 4.0E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IM40_06940 76a6242751e441aebea6209ae99dd658 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 119 132 4.0E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IM40_06940 76a6242751e441aebea6209ae99dd658 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 87 100 4.0E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IM40_06940 76a6242751e441aebea6209ae99dd658 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 114 131 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 ProSitePatterns PS01312 SecA family signature. 487 502 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 824 20.177 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 808 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Pfam PF07516 SecA Wing and Scaffold domain 611 821 1.2E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Gene3D G3DSA:3.90.1440.10 229 355 1.3E-180 T 14-10-2018 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 63 87 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 363 380 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 400 413 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 326 348 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 170 190 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 117 127 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 PRINTS PR00906 SecA protein signature 101 115 1.5E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 SMART SM00957 6 389 7.8E-295 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 SUPERFAMILY SSF81767 227 354 1.31E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 SUPERFAMILY SSF52540 404 611 1.41E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Gene3D G3DSA:3.40.50.300 22 402 1.3E-180 T 14-10-2018 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Pfam PF01043 SecA preprotein cross-linking domain 232 345 2.0E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Pfam PF07517 SecA DEAD-like domain 7 389 6.7E-134 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Gene3D G3DSA:1.10.3060.10 614 822 4.7E-72 T 14-10-2018 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 SUPERFAMILY SSF81886 613 916 7.06E-77 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Gene3D G3DSA:3.40.50.300 404 612 4.2E-90 T 14-10-2018 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Gene3D G3DSA:3.10.450.50 823 928 8.8E-7 T 14-10-2018 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 SUPERFAMILY SSF52540 6 402 1.33E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 SMART SM00958 228 345 3.0E-75 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 IM40_08925 88f3d884d073a4cd5d3d31c7a3e3d650 928 Pfam PF02810 SEC-C motif 908 926 3.6E-8 T 14-10-2018 IPR004027 SEC-C motif IM40_01260 53035b822f921c8876a76c393011857d 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 7.5E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01260 53035b822f921c8876a76c393011857d 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_01260 53035b822f921c8876a76c393011857d 55 SUPERFAMILY SSF57829 2 53 7.32E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 IM40_01260 53035b822f921c8876a76c393011857d 55 Pfam PF00471 Ribosomal protein L33 7 53 3.6E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01260 53035b822f921c8876a76c393011857d 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 13.855 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01260 53035b822f921c8876a76c393011857d 55 Gene3D G3DSA:2.20.28.120 1 55 1.9E-25 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 211 225 1.6E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 405 422 1.6E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 240 250 1.6E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 350 366 1.6E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 300 312 1.6E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 Pfam PF01189 16S rRNA methyltransferase RsmB/F 234 420 2.6E-44 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 SUPERFAMILY SSF53335 151 423 4.38E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00920 a5cab8ba04641eec4c3a1aae47702201 423 Gene3D G3DSA:3.40.50.150 131 422 1.0E-72 T 14-10-2018 IM40_10120 bfea98317c5b7617c0606f07b9c1597c 626 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 199 579 3.4E-125 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain IM40_10120 bfea98317c5b7617c0606f07b9c1597c 626 Gene3D G3DSA:3.40.50.300 182 582 2.1E-121 T 14-10-2018 IM40_10120 bfea98317c5b7617c0606f07b9c1597c 626 Gene3D G3DSA:1.10.8.80 275 386 2.1E-121 T 14-10-2018 IM40_10120 bfea98317c5b7617c0606f07b9c1597c 626 SUPERFAMILY SSF52540 207 577 9.51E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09950 e84f979bcfb35197a48a4d4b51de5908 1301 SUPERFAMILY SSF56112 840 1138 2.56E-27 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_09950 e84f979bcfb35197a48a4d4b51de5908 1301 Pfam PF00069 Protein kinase domain 837 1139 6.5E-21 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IM40_09950 e84f979bcfb35197a48a4d4b51de5908 1301 Gene3D G3DSA:1.10.510.10 812 1155 3.3E-24 T 14-10-2018 IM40_09950 e84f979bcfb35197a48a4d4b51de5908 1301 SMART SM00220 835 1143 1.0E-9 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IM40_09950 e84f979bcfb35197a48a4d4b51de5908 1301 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 985 997 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 IM40_01405 d34673d1f160446bcdb2b51973a042ba 209 Pfam PF01926 50S ribosome-binding GTPase 39 157 2.6E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 IM40_01405 d34673d1f160446bcdb2b51973a042ba 209 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 21 205 7.9E-67 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 IM40_01405 d34673d1f160446bcdb2b51973a042ba 209 Gene3D G3DSA:3.40.50.300 13 209 2.9E-55 T 14-10-2018 IM40_01405 d34673d1f160446bcdb2b51973a042ba 209 SUPERFAMILY SSF52540 31 207 9.5E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01405 d34673d1f160446bcdb2b51973a042ba 209 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 25 209 27.165 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 IM40_05990 951045c030d5594ce6d5723c01814c86 103 Pfam PF04972 BON domain 35 102 6.1E-19 T 14-10-2018 IPR007055 BON domain IM40_05990 951045c030d5594ce6d5723c01814c86 103 SMART SM00749 40 103 3.1E-5 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 Gene3D G3DSA:3.80.10.10 396 552 6.0E-22 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 SUPERFAMILY SSF52151 52 371 2.28E-37 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 Gene3D G3DSA:3.40.1090.10 37 395 1.1E-64 T 14-10-2018 IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 Pfam PF13516 Leucine Rich repeat 475 490 0.035 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 Pfam PF13516 Leucine Rich repeat 500 520 0.0079 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 SUPERFAMILY SSF52047 395 550 5.02E-22 T 14-10-2018 IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 SMART SM00368 500 526 17.0 T 14-10-2018 IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 SMART SM00368 444 471 1.1 T 14-10-2018 IM40_09730 1b3a9037adb59c486b02d3c6f4ab5e23 556 SMART SM00368 472 499 6.0 T 14-10-2018 IM40_08565 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF01548 Transposase 6 144 1.9E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_08565 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 3.6E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_08360 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF01548 Transposase 6 144 1.9E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_08360 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 3.6E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_09440 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF01548 Transposase 6 144 1.9E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_09440 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 3.6E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_01675 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF01548 Transposase 6 144 1.9E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_01675 b2cbbbbe8f275ec1c56541609e2d9330 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 3.6E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_04855 78e1cc8d537119b072e8b96649198944 184 Pfam PF03602 Conserved hypothetical protein 95 1 176 1.5E-50 T 14-10-2018 IM40_04855 78e1cc8d537119b072e8b96649198944 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 177 4.6E-46 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 IM40_04855 78e1cc8d537119b072e8b96649198944 184 PIRSF PIRSF004553 1 181 3.6E-50 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 IM40_04855 78e1cc8d537119b072e8b96649198944 184 Gene3D G3DSA:3.40.50.150 1 180 1.9E-53 T 14-10-2018 IM40_04855 78e1cc8d537119b072e8b96649198944 184 SUPERFAMILY SSF53335 1 169 1.12E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Pfam PF00873 AcrB/AcrD/AcrF family 5 1003 2.2E-299 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.5E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:3.30.70.1430 40 794 0.0 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82714 699 784 2.35E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82714 182 265 1.1E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:3.30.70.1430 555 647 0.0 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82866 813 1003 1.7E-45 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:1.20.1640.10 501 1000 0.0 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82693 40 134 7.85E-25 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82693 553 648 1.41E-17 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82693 135 323 3.66E-24 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:3.30.2090.10 698 786 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82693 656 824 1.2E-11 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:1.20.1640.10 10 500 0.0 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 SUPERFAMILY SSF82866 295 489 2.35E-49 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:3.30.70.1440 648 843 0.0 T 14-10-2018 IM40_07410 c652a03fe0ea402e4f5fdf1aecad3e42 1013 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 14-10-2018 IM40_02265 3bc441ba5b18813f0a6167127db432dc 92 Gene3D G3DSA:3.30.2310.20 4 91 4.4E-32 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_02265 3bc441ba5b18813f0a6167127db432dc 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 90 2.0E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_02265 3bc441ba5b18813f0a6167127db432dc 92 SUPERFAMILY SSF143011 6 89 2.88E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_02265 3bc441ba5b18813f0a6167127db432dc 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 8 90 6.8E-11 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 Gene3D G3DSA:3.90.79.10 4 136 7.5E-33 T 14-10-2018 IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 Pfam PF00293 NUDIX domain 13 115 2.1E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 PRINTS PR00502 NUDIX hydrolase family signature 36 50 2.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 PRINTS PR00502 NUDIX hydrolase family signature 50 65 2.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 TIGRFAM TIGR00586 mutt: mutator mutT protein 21 132 8.8E-29 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 IM40_00370 d7f4ef2c8f0c9c6a887e1e2e0e51e196 137 SUPERFAMILY SSF55811 5 131 6.77E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 SUPERFAMILY SSF51246 330 442 1.41E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 1.0E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 Pfam PF02785 Biotin carboxylase C-terminal domain 335 440 1.1E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 SMART SM00878 335 440 1.2E-63 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 1.5E-77 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 SUPERFAMILY SSF56059 83 347 1.2E-69 T 14-10-2018 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 SUPERFAMILY SSF52440 1 113 2.52E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 Gene3D G3DSA:3.30.470.130 1 445 2.0E-184 T 14-10-2018 IM40_06935 6ebb71bfc051daf731705b5c3e6e3d15 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.0E-211 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 Gene3D G3DSA:3.30.1490.20 114 176 9.9E-65 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 Gene3D G3DSA:3.40.50.20 1 87 4.5E-25 T 14-10-2018 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 Pfam PF01820 D-ala D-ala ligase N-terminus 4 88 2.2E-16 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 300 3.1E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 SUPERFAMILY SSF52440 1 99 5.47E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IM40_02865 042378f63325026337ec3da1f9ac99c5 305 PIRSF PIRSF039102 1 52 7.9E-10 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 PIRSF PIRSF039102 48 303 8.4E-69 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 302 32.115 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 Gene3D G3DSA:3.30.470.20 89 295 9.9E-65 T 14-10-2018 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 241 272 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 Pfam PF07478 D-ala D-ala ligase C-terminus 131 299 3.5E-44 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02865 042378f63325026337ec3da1f9ac99c5 305 SUPERFAMILY SSF56059 99 299 1.09E-50 T 14-10-2018 IM40_05130 1a169f9054c37966dc20781f25382250 595 Pfam PF00557 Metallopeptidase family M24 309 523 1.2E-44 T 14-10-2018 IPR000994 Peptidase M24 IM40_05130 1a169f9054c37966dc20781f25382250 595 Gene3D G3DSA:3.40.350.10 146 291 2.3E-29 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IM40_05130 1a169f9054c37966dc20781f25382250 595 Gene3D G3DSA:3.40.350.10 1 145 8.8E-43 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IM40_05130 1a169f9054c37966dc20781f25382250 595 SUPERFAMILY SSF53092 10 126 4.88E-9 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IM40_05130 1a169f9054c37966dc20781f25382250 595 Gene3D G3DSA:3.90.230.10 301 595 1.5E-98 T 14-10-2018 IM40_05130 1a169f9054c37966dc20781f25382250 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 1.9E-23 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain IM40_05130 1a169f9054c37966dc20781f25382250 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 134 3.8E-14 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 IM40_05130 1a169f9054c37966dc20781f25382250 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 147 307 1.2E-36 T 14-10-2018 IM40_05130 1a169f9054c37966dc20781f25382250 595 SUPERFAMILY SSF55920 306 559 3.27E-56 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 Gene3D G3DSA:1.10.3710.10 338 435 1.1E-28 T 14-10-2018 IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 Gene3D G3DSA:1.20.272.10 234 337 5.0E-45 T 14-10-2018 IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 SMART SM00382 54 170 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 SUPERFAMILY SSF52540 15 223 1.37E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 Gene3D G3DSA:3.40.50.300 8 169 3.7E-46 T 14-10-2018 IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 425 3.7E-66 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 Pfam PF16193 AAA C-terminal domain 188 259 1.6E-18 T 14-10-2018 IPR032423 AAA C-terminal domain IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 SUPERFAMILY SSF48019 245 429 2.55E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 IM40_02155 f4748bdd5c9529e66aad861fbcefbe39 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 167 9.9E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IM40_09530 a72be5b2a13b580e3e2945b38b2e943f 278 Pfam PF01844 HNH endonuclease 220 266 8.6E-12 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 IM40_09530 a72be5b2a13b580e3e2945b38b2e943f 278 Pfam PF08388 Group II intron, maturase-specific domain 59 136 3.0E-26 T 14-10-2018 IPR013597 Group II intron, maturase-specific IM40_09530 a72be5b2a13b580e3e2945b38b2e943f 278 Gene3D G3DSA:3.30.40.60 190 276 3.5E-8 T 14-10-2018 IM40_09530 a72be5b2a13b580e3e2945b38b2e943f 278 SMART SM00507 209 261 2.1E-11 T 14-10-2018 IPR003615 HNH nuclease IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 Gene3D G3DSA:3.40.50.300 4 289 8.5E-77 T 14-10-2018 IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 Pfam PF00005 ABC transporter 344 477 6.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 SUPERFAMILY SSF52540 10 246 2.47E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 556 7.7E-286 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 Pfam PF12848 ABC transporter 234 305 3.4E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 Gene3D G3DSA:3.40.50.300 290 554 1.5E-68 T 14-10-2018 IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 SUPERFAMILY SSF52540 309 525 6.43E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 SMART SM00382 352 530 9.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 SMART SM00382 33 236 2.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_01320 5d45d5616e453a04ed51d5e9e5959dee 559 Pfam PF00005 ABC transporter 24 195 5.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_09055 f802b0b346453656e967e258ea8378c3 236 SUPERFAMILY SSF53098 1 169 2.05E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_09055 f802b0b346453656e967e258ea8378c3 236 Gene3D G3DSA:3.30.420.10 2 173 7.2E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_09055 f802b0b346453656e967e258ea8378c3 236 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 171 1.7E-46 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_09055 f802b0b346453656e967e258ea8378c3 236 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 221 5.5E-84 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IM40_09055 f802b0b346453656e967e258ea8378c3 236 SMART SM00479 2 172 8.7E-47 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IM40_09055 f802b0b346453656e967e258ea8378c3 236 Pfam PF00929 Exonuclease 4 163 1.7E-33 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IM40_01100 5d27cb39ae79c19cfbc627170b881b8f 150 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 147 27.227 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 IM40_01100 5d27cb39ae79c19cfbc627170b881b8f 150 SUPERFAMILY SSF75217 2 144 9.81E-33 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases IM40_01100 5d27cb39ae79c19cfbc627170b881b8f 150 Gene3D G3DSA:3.40.1280.10 1 149 3.1E-44 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IM40_01100 5d27cb39ae79c19cfbc627170b881b8f 150 PIRSF PIRSF029256 1 150 2.8E-45 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 IM40_01100 5d27cb39ae79c19cfbc627170b881b8f 150 Pfam PF00588 SpoU rRNA Methylase family 1 137 1.3E-26 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 IM40_10625 c497b3cbbf8bec4db5e9227d43d8002a 96 SUPERFAMILY SSF81383 47 96 2.88E-9 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_10625 c497b3cbbf8bec4db5e9227d43d8002a 96 Pfam PF12937 F-box-like 62 96 3.3E-8 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_10625 c497b3cbbf8bec4db5e9227d43d8002a 96 Gene3D G3DSA:1.20.1280.50 59 96 2.1E-9 T 14-10-2018 IM40_11275 c32dde0d750b256a9cd591903ffb5573 296 SUPERFAMILY SSF53850 96 282 4.89E-15 T 14-10-2018 IM40_11275 c32dde0d750b256a9cd591903ffb5573 296 SUPERFAMILY SSF46785 5 89 1.36E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_11275 c32dde0d750b256a9cd591903ffb5573 296 Gene3D G3DSA:3.40.190.290 95 291 3.0E-21 T 14-10-2018 IM40_11275 c32dde0d750b256a9cd591903ffb5573 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.8E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_11275 c32dde0d750b256a9cd591903ffb5573 296 Pfam PF03466 LysR substrate binding domain 94 278 1.9E-9 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_11275 c32dde0d750b256a9cd591903ffb5573 296 Gene3D G3DSA:1.10.10.10 3 89 2.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_00040 453e64f902694b13161dfa3c54f9b545 228 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 11 218 3.9E-54 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 IM40_00040 453e64f902694b13161dfa3c54f9b545 228 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 8 217 36.399 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 IM40_00040 453e64f902694b13161dfa3c54f9b545 228 Pfam PF02666 Phosphatidylserine decarboxylase 43 213 2.0E-35 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 IM40_02065 f24050f3b9bd57359efc355052acacde 79 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 3.0E-21 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 2.8E-35 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 Pfam PF00366 Ribosomal protein S17 8 74 6.7E-31 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 Gene3D G3DSA:2.40.50.140 1 79 9.2E-33 T 14-10-2018 IM40_02065 f24050f3b9bd57359efc355052acacde 79 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 4.3E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 4.3E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 4.3E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 76 23.019 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02065 f24050f3b9bd57359efc355052acacde 79 SUPERFAMILY SSF50249 3 75 3.56E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 ProSitePatterns PS00433 Phosphofructokinase signature. 277 295 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 Gene3D G3DSA:3.40.50.460 154 289 8.1E-98 T 14-10-2018 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 Pfam PF00365 Phosphofructokinase 4 309 1.8E-92 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 358 39.831 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 SUPERFAMILY SSF53784 3 348 3.01E-101 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 172 188 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 190 207 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 273 295 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 106 122 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 152 170 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 226 238 4.5E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 PIRSF PIRSF000532 1 359 5.9E-119 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 IM40_04950 0a796e44ae515ff2beb5d56b5649aa28 361 Gene3D G3DSA:3.40.50.450 5 334 8.1E-98 T 14-10-2018 IM40_05245 1f960f0dc9ab7a22e016a98caf0a9145 208 SUPERFAMILY SSF52540 3 203 7.16E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_05245 1f960f0dc9ab7a22e016a98caf0a9145 208 Gene3D G3DSA:3.40.50.300 1 207 4.4E-64 T 14-10-2018 IM40_05245 1f960f0dc9ab7a22e016a98caf0a9145 208 Pfam PF02223 Thymidylate kinase 9 199 1.7E-51 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 IM40_05245 1f960f0dc9ab7a22e016a98caf0a9145 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.9E-54 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 IM40_05245 1f960f0dc9ab7a22e016a98caf0a9145 208 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 28.934 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 IM40_05245 1f960f0dc9ab7a22e016a98caf0a9145 208 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 416 2.4E-193 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 48 218 5.1E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 SUPERFAMILY SSF140490 326 418 3.27E-36 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 Pfam PF10531 SLBB domain 242 290 1.6E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 SUPERFAMILY SSF142984 240 325 1.57E-21 T 14-10-2018 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 SMART SM00928 330 375 8.5E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 Gene3D G3DSA:3.10.20.600 231 327 5.3E-38 T 14-10-2018 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 414 3.0E-30 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 Gene3D G3DSA:3.40.50.11540 52 230 2.9E-84 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 166 181 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 SUPERFAMILY SSF142019 5 239 1.2E-87 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07285 d89b06c1693cd7dc708bd3be5a99ac0a 424 Gene3D G3DSA:1.20.1440.230 328 423 2.4E-36 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_08880 db887670ac85782098eb93ece45ef89e 111 SUPERFAMILY SSF54862 3 101 1.04E-22 T 14-10-2018 IM40_08880 db887670ac85782098eb93ece45ef89e 111 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_08880 db887670ac85782098eb93ece45ef89e 111 Gene3D G3DSA:3.30.70.20 2 101 8.2E-28 T 14-10-2018 IM40_08880 db887670ac85782098eb93ece45ef89e 111 Pfam PF00037 4Fe-4S binding domain 34 56 5.7E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IM40_08880 db887670ac85782098eb93ece45ef89e 111 Pfam PF11953 Domain of unknown function (DUF3470) 66 104 9.2E-15 T 14-10-2018 IPR022569 Ferredoxin, C-terminal IM40_08880 db887670ac85782098eb93ece45ef89e 111 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.3E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 IM40_08880 db887670ac85782098eb93ece45ef89e 111 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.3E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 IM40_08880 db887670ac85782098eb93ece45ef89e 111 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.3E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 IM40_00705 cec05915da8885b75faf62d8da42e5bc 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 20.521 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 IM40_00705 cec05915da8885b75faf62d8da42e5bc 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 2.9E-18 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 IM40_00705 cec05915da8885b75faf62d8da42e5bc 95 SUPERFAMILY SSF141000 3 93 3.92E-24 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 IM40_00705 cec05915da8885b75faf62d8da42e5bc 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 4.1E-23 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 IM40_00705 cec05915da8885b75faf62d8da42e5bc 95 Gene3D G3DSA:1.10.20.60 1 93 6.4E-23 T 14-10-2018 IM40_02945 5a3d09d1066e963bb6f5864aeaa7281e 160 SUPERFAMILY SSF50249 4 160 8.57E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_02945 5a3d09d1066e963bb6f5864aeaa7281e 160 Gene3D G3DSA:2.40.50.140 2 115 6.6E-47 T 14-10-2018 IM40_02945 5a3d09d1066e963bb6f5864aeaa7281e 160 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 33.572 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 IM40_02945 5a3d09d1066e963bb6f5864aeaa7281e 160 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 160 6.3E-45 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 IM40_02945 5a3d09d1066e963bb6f5864aeaa7281e 160 Pfam PF00436 Single-strand binding protein family 5 105 3.2E-37 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 Gene3D G3DSA:3.20.20.70 1 217 4.3E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 SUPERFAMILY SSF51569 1 215 7.33E-70 T 14-10-2018 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 205 7.4E-55 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 1.6E-81 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IM40_05400 fb8223d62ac7241a2c5dd054d0285b33 218 Hamap MF_00494 Probable transaldolase [tal]. 1 215 42.951 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 IM40_08790 3b7cad875a571b39a8128e7f739a334c 256 SUPERFAMILY SSF56925 46 256 1.75E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IM40_08790 3b7cad875a571b39a8128e7f739a334c 256 Pfam PF13505 Outer membrane protein beta-barrel domain 39 213 4.2E-10 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel IM40_01400 c73b142f8d08e47109ba00beca06af44 569 PRINTS PR01900 YidC translocation/secretion protein signature 490 505 4.4E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 PRINTS PR01900 YidC translocation/secretion protein signature 342 358 4.4E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 PRINTS PR01900 YidC translocation/secretion protein signature 509 533 4.4E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 7 556 22.182 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 Pfam PF02096 60Kd inner membrane protein 357 553 5.4E-61 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 PRINTS PR00701 60kDa inner membrane protein signature 418 441 4.2E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 PRINTS PR00701 60kDa inner membrane protein signature 246 261 4.2E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 PRINTS PR00701 60kDa inner membrane protein signature 327 347 4.2E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 356 553 1.5E-71 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_01400 c73b142f8d08e47109ba00beca06af44 569 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 7 355 1.5E-85 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal IM40_01400 c73b142f8d08e47109ba00beca06af44 569 Gene3D G3DSA:2.70.98.90 65 336 1.8E-38 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily IM40_01400 c73b142f8d08e47109ba00beca06af44 569 Pfam PF14849 YidC periplasmic domain 69 345 2.1E-80 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain IM40_08990 d2fd426d4fb056c7009648cfc7a300bc 122 Gene3D G3DSA:1.10.3830.10 2 120 3.1E-27 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 IM40_08990 d2fd426d4fb056c7009648cfc7a300bc 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 14 115 1.1E-24 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Pfam PF03389 MobA/MobL family 18 79 9.6E-12 T 14-10-2018 IPR005053 MobA/MobL protein IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Pfam PF03389 MobA/MobL family 107 180 7.6E-13 T 14-10-2018 IPR005053 MobA/MobL protein IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Pfam PF03389 MobA/MobL family 183 232 2.3E-6 T 14-10-2018 IPR005053 MobA/MobL protein IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 SUPERFAMILY SSF56731 2015 2141 2.48E-6 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Gene3D G3DSA:3.40.50.300 392 592 5.8E-41 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Pfam PF13604 AAA domain 413 624 4.5E-38 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Gene3D G3DSA:3.30.930.30 2 217 1.8E-36 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Gene3D G3DSA:3.40.1360.10 2010 2133 1.0E-8 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Pfam PF13362 Toprim domain 2026 2122 1.5E-12 T 14-10-2018 IPR006171 TOPRIM domain IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 SUPERFAMILY SSF52540 555 830 6.9E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Gene3D G3DSA:2.30.30.940 675 790 5.8E-41 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 Gene3D G3DSA:3.40.50.300 593 805 5.8E-41 T 14-10-2018 IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 SUPERFAMILY SSF52540 409 571 3.16E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10140 00a6088f86a8ee59a4fbf78852944086 2402 SUPERFAMILY SSF57783 1829 1883 1.87E-5 T 14-10-2018 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 Pfam PF01039 Carboxyl transferase domain 95 237 3.8E-19 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 8.9E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 8.9E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 8.9E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 8.9E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 8.9E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 Gene3D G3DSA:3.90.226.10 24 282 9.7E-78 T 14-10-2018 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 SUPERFAMILY SSF52096 24 281 8.24E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 280 1.6E-109 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04300 adb9fd00f0ff3cac4855bb7caa305a4a 283 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 37.059 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 Gene3D G3DSA:3.40.50.720 1 199 6.7E-80 T 14-10-2018 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 SUPERFAMILY SSF52413 309 429 9.02E-38 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 PRINTS PR00945 Mercuric reductase class II signature 2 19 9.0E-5 T 14-10-2018 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 PRINTS PR00945 Mercuric reductase class II signature 188 208 9.0E-5 T 14-10-2018 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 PRINTS PR00945 Mercuric reductase class II signature 22 37 9.0E-5 T 14-10-2018 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 Gene3D G3DSA:3.40.50.720 233 446 1.7E-76 T 14-10-2018 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 PIRSF PIRSF500134 1 436 1.6E-183 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 418 1.1E-31 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 Gene3D G3DSA:1.20.5.100 201 231 1.6E-17 T 14-10-2018 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 SMART SM00984 317 418 8.5E-46 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 SUPERFAMILY SSF48179 201 297 1.87E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 6.4E-146 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 SUPERFAMILY SSF51735 1 205 5.29E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_04080 439c523247a588303e47a2d1ce98bdef 447 PIRSF PIRSF000124 1 433 9.2E-152 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 2.1E-37 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_04080 439c523247a588303e47a2d1ce98bdef 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 4.1E-68 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 SMART SM00411 1 89 2.5E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 9.5E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 SUPERFAMILY SSF47729 1 89 4.86E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 6.1E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 6.1E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 6.1E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09835 3dddc7d65d7f6b35b0acec86e4fdea27 90 Gene3D G3DSA:4.10.520.10 1 90 9.0E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 Hamap MF_00235 Adenylate kinase [adk]. 1 212 42.781 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 PRINTS PR00094 Adenylate kinase signature 4 17 1.3E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 PRINTS PR00094 Adenylate kinase signature 176 190 1.3E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 PRINTS PR00094 Adenylate kinase signature 79 95 1.3E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 PRINTS PR00094 Adenylate kinase signature 159 174 1.3E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 PRINTS PR00094 Adenylate kinase signature 32 46 1.3E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 SUPERFAMILY SSF52540 2 213 6.82E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 SUPERFAMILY SSF57774 124 161 4.64E-10 T 14-10-2018 IPR036193 Adenylate kinase, active site lid domain superfamily GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 Pfam PF00406 Adenylate kinase 5 189 4.1E-47 T 14-10-2018 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 TIGRFAM TIGR01351 adk: adenylate kinase 2 210 2.2E-71 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 Pfam PF05191 Adenylate kinase, active site lid 125 161 8.3E-10 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 IM40_02125 8cf3d8b17b94806478997e36a0e4df2e 223 Gene3D G3DSA:3.40.50.300 1 223 3.4E-70 T 14-10-2018 IM40_09600 fcb80d9152540527296f3506da4b7988 334 Pfam PF05954 Phage late control gene D protein (GPD) 127 322 7.5E-13 T 14-10-2018 IM40_09600 fcb80d9152540527296f3506da4b7988 334 SUPERFAMILY SSF69279 19 190 1.36E-9 T 14-10-2018 IM40_01310 7cfce1bea5c3882dbdc7d2282ed1f2bd 497 SUPERFAMILY SSF103473 13 490 1.83E-25 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_01310 7cfce1bea5c3882dbdc7d2282ed1f2bd 497 Pfam PF00854 POT family 86 447 9.7E-64 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 IM40_01310 7cfce1bea5c3882dbdc7d2282ed1f2bd 497 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 74 98 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 IM40_01310 7cfce1bea5c3882dbdc7d2282ed1f2bd 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 15 491 2.0E-113 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 IM40_01310 7cfce1bea5c3882dbdc7d2282ed1f2bd 497 Gene3D G3DSA:1.20.1250.20 10 493 7.8E-127 T 14-10-2018 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 SUPERFAMILY SSF55920 10 253 1.14E-86 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 Hamap MF_01974 Methionine aminopeptidase [map]. 7 254 40.201 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 6.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 6.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 6.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 6.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 Gene3D G3DSA:3.90.230.10 1 255 2.0E-103 T 14-10-2018 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 253 3.7E-92 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IM40_05275 fb323fe88ab94549d0dfd752f94c8b45 255 Pfam PF00557 Metallopeptidase family M24 17 245 1.9E-50 T 14-10-2018 IPR000994 Peptidase M24 IM40_00915 aaf463bc6251def16b12196495bc8a23 226 SUPERFAMILY SSF53335 16 225 8.69E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00915 aaf463bc6251def16b12196495bc8a23 226 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 30 225 28.919 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 IM40_00915 aaf463bc6251def16b12196495bc8a23 226 Gene3D G3DSA:3.40.50.150 45 226 4.4E-57 T 14-10-2018 IM40_00915 aaf463bc6251def16b12196495bc8a23 226 PIRSF PIRSF005461 10 226 1.2E-73 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 IM40_00915 aaf463bc6251def16b12196495bc8a23 226 Pfam PF01728 FtsJ-like methyltransferase 46 224 7.2E-53 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 IM40_07215 5df58b569d3779960daf411b7b85351a 416 SUPERFAMILY SSF51230 1 85 2.75E-23 T 14-10-2018 IPR011053 Single hybrid motif IM40_07215 5df58b569d3779960daf411b7b85351a 416 SUPERFAMILY SSF47005 112 149 4.32E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IM40_07215 5df58b569d3779960daf411b7b85351a 416 Pfam PF00364 Biotin-requiring enzyme 3 73 4.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment IM40_07215 5df58b569d3779960daf411b7b85351a 416 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IM40_07215 5df58b569d3779960daf411b7b85351a 416 Gene3D G3DSA:4.10.320.10 105 151 1.3E-14 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IM40_07215 5df58b569d3779960daf411b7b85351a 416 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 415 2.8E-164 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 IM40_07215 5df58b569d3779960daf411b7b85351a 416 Gene3D G3DSA:2.40.50.100 1 101 4.7E-21 T 14-10-2018 IM40_07215 5df58b569d3779960daf411b7b85351a 416 SUPERFAMILY SSF52777 186 414 5.34E-86 T 14-10-2018 IM40_07215 5df58b569d3779960daf411b7b85351a 416 Gene3D G3DSA:3.30.559.10 185 416 3.1E-91 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_07215 5df58b569d3779960daf411b7b85351a 416 Pfam PF02817 e3 binding domain 114 146 2.8E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 IM40_07215 5df58b569d3779960daf411b7b85351a 416 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 186 413 1.7E-78 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 SUPERFAMILY SSF75625 3 245 9.29E-88 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 Gene3D G3DSA:3.30.70.980 85 236 4.8E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 Gene3D G3DSA:3.30.70.980 133 205 4.8E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 33.417 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 Pfam PF01709 Transcriptional regulator 5 236 3.5E-89 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.2E-93 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06725 b1faf7350da6f71b922332ecc5957329 249 Gene3D G3DSA:1.10.10.200 1 81 2.8E-32 T 14-10-2018 IPR017856 Integrase-like, N-terminal IM40_01880 2232be1184aa2ea3db92c67454b565b1 346 Pfam PF16113 Enoyl-CoA hydratase/isomerase 12 337 5.0E-124 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 IM40_01880 2232be1184aa2ea3db92c67454b565b1 346 SUPERFAMILY SSF52096 8 323 6.08E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_01880 2232be1184aa2ea3db92c67454b565b1 346 Gene3D G3DSA:3.90.226.40 1 345 3.0E-121 T 14-10-2018 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 SUPERFAMILY SSF52540 22 261 6.39E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 Gene3D G3DSA:3.40.50.300 17 257 1.2E-74 T 14-10-2018 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 Pfam PF08402 TOBE domain 298 378 2.7E-16 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 378 1.7E-131 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 Gene3D G3DSA:2.40.50.100 301 366 3.2E-11 T 14-10-2018 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 SMART SM00382 47 232 6.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 SUPERFAMILY SSF50331 255 378 8.35E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 Pfam PF00005 ABC transporter 38 180 5.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_04375 bfc9c608e723c5133c1da0868c65179b 380 Gene3D G3DSA:2.40.50.140 258 300 3.2E-11 T 14-10-2018 IM40_04600 914ba78ff29fe74e51c3a4aa33bed5bd 318 Pfam PF04392 ABC transporter substrate binding protein 22 313 3.7E-86 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein IM40_04600 914ba78ff29fe74e51c3a4aa33bed5bd 318 SUPERFAMILY SSF53822 55 284 9.42E-14 T 14-10-2018 IPR028082 Periplasmic binding protein-like I IM40_04600 914ba78ff29fe74e51c3a4aa33bed5bd 318 Gene3D G3DSA:3.40.50.2300 33 286 6.7E-82 T 14-10-2018 IM40_04600 914ba78ff29fe74e51c3a4aa33bed5bd 318 Gene3D G3DSA:3.40.50.2300 137 308 6.7E-82 T 14-10-2018 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 PIRSF PIRSF001549 1 410 3.7E-117 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 Gene3D G3DSA:3.40.50.800 318 410 1.0E-20 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 SUPERFAMILY SSF52954 320 409 1.5E-20 T 14-10-2018 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 Pfam PF03129 Anticodon binding domain 322 409 1.0E-15 T 14-10-2018 IPR004154 Anticodon-binding IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 SUPERFAMILY SSF55681 2 314 1.49E-90 T 14-10-2018 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 409 30.202 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 Pfam PF13393 Histidyl-tRNA synthetase 7 308 2.8E-43 T 14-10-2018 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 Gene3D G3DSA:3.30.930.10 1 317 9.7E-109 T 14-10-2018 IM40_04625 72a640cb5ffc17ac95251f36ef50f4df 410 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 3 399 2.7E-139 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 IM40_02520 69435a2ced620d2051380389c6965fb4 394 SUPERFAMILY SSF56349 103 376 3.53E-64 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IM40_02520 69435a2ced620d2051380389c6965fb4 394 Pfam PF00589 Phage integrase family 206 370 4.6E-31 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IM40_02520 69435a2ced620d2051380389c6965fb4 394 Pfam PF13356 Arm DNA-binding domain 9 97 1.1E-15 T 14-10-2018 IPR025166 Integrase, DNA-binding domain IM40_02520 69435a2ced620d2051380389c6965fb4 394 Gene3D G3DSA:1.10.150.130 101 202 3.2E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal IM40_02520 69435a2ced620d2051380389c6965fb4 394 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 103 159 4.9E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 IM40_02520 69435a2ced620d2051380389c6965fb4 394 Gene3D G3DSA:1.10.443.10 203 388 1.5E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IM40_02520 69435a2ced620d2051380389c6965fb4 394 Gene3D G3DSA:3.30.160.390 7 99 5.2E-8 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily IM40_01815 cd26bc2ae9457c18123c2e4e7c9f7cf3 479 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 335 4.0E-109 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IM40_01815 cd26bc2ae9457c18123c2e4e7c9f7cf3 479 SUPERFAMILY SSF53659 2 339 4.03E-119 T 14-10-2018 IM40_01815 cd26bc2ae9457c18123c2e4e7c9f7cf3 479 SMART SM01329 5 335 4.7E-161 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IM40_01815 cd26bc2ae9457c18123c2e4e7c9f7cf3 479 Gene3D G3DSA:3.30.70.1570 369 479 5.3E-31 T 14-10-2018 IM40_01815 cd26bc2ae9457c18123c2e4e7c9f7cf3 479 Gene3D G3DSA:3.40.718.10 1 368 1.5E-151 T 14-10-2018 IM40_01815 cd26bc2ae9457c18123c2e4e7c9f7cf3 479 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 228 247 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 SUPERFAMILY SSF50677 191 342 8.11E-61 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 SUPERFAMILY SSF52374 3 578 3.68E-136 T 14-10-2018 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 568 3.1E-206 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Gene3D G3DSA:1.10.287.380 807 879 2.4E-17 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Gene3D G3DSA:3.40.50.620 22 529 2.2E-301 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_07760 85c03d01a60d3288afcf27affc745a99 881 SUPERFAMILY SSF47323 581 827 7.1E-51 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Gene3D G3DSA:3.90.740.10 175 343 2.2E-301 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Pfam PF08264 Anticodon-binding domain of tRNA 611 754 1.8E-35 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 858 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 PRINTS PR00986 Valyl-tRNA synthetase signature 480 498 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 PRINTS PR00986 Valyl-tRNA synthetase signature 449 470 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 878 4.1E-15 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 879 15.529 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 SUPERFAMILY SSF46589 814 878 1.05E-11 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 IM40_07760 85c03d01a60d3288afcf27affc745a99 881 Gene3D G3DSA:1.10.730.10 2 743 2.2E-301 T 14-10-2018 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 186 269 9.7E-23 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 Gene3D G3DSA:1.20.1180.10 204 273 8.8E-16 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 SUPERFAMILY SSF51161 11 261 1.7E-71 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 14 269 1.5E-105 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 Gene3D G3DSA:2.160.10.10 6 200 6.6E-47 T 14-10-2018 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 1.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 1.9E-5 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 11 270 43.893 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 159 187 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IM40_07720 58d33dd2df817153e600d3c99e83e3ff 273 PIRSF PIRSF000456 10 273 4.5E-106 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 IM40_10585 8bfa357196400528cb82c1723b755f49 213 SUPERFAMILY SSF52540 1 213 2.34E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10585 8bfa357196400528cb82c1723b755f49 213 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 190 1.5E-11 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IM40_10585 8bfa357196400528cb82c1723b755f49 213 Gene3D G3DSA:3.40.50.300 1 213 1.6E-45 T 14-10-2018 IM40_10585 8bfa357196400528cb82c1723b755f49 213 PIRSF PIRSF009320 1 213 9.3E-41 T 14-10-2018 IM40_02575 6c69eca1eb272fb363a2b667f942dcfd 207 SUPERFAMILY SSF47413 5 55 2.44E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_02575 6c69eca1eb272fb363a2b667f942dcfd 207 Gene3D G3DSA:1.10.260.40 4 112 1.1E-5 T 14-10-2018 IM40_05465 08cd1305ba9744cf3c135f532b049cf3 261 Pfam PF13516 Leucine Rich repeat 151 171 0.19 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_05465 08cd1305ba9744cf3c135f532b049cf3 261 Pfam PF13516 Leucine Rich repeat 126 143 1.1 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_05465 08cd1305ba9744cf3c135f532b049cf3 261 SUPERFAMILY SSF52047 76 247 1.2E-25 T 14-10-2018 IM40_05465 08cd1305ba9744cf3c135f532b049cf3 261 Gene3D G3DSA:3.80.10.10 52 257 2.4E-28 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_02090 9d5f6e9077911c933b6de018bd100b3c 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 28.527 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02090 9d5f6e9077911c933b6de018bd100b3c 132 Gene3D G3DSA:3.30.1490.10 76 132 2.7E-24 T 14-10-2018 IM40_02090 9d5f6e9077911c933b6de018bd100b3c 132 Gene3D G3DSA:3.30.1370.30 2 74 2.7E-20 T 14-10-2018 IM40_02090 9d5f6e9077911c933b6de018bd100b3c 132 SUPERFAMILY SSF56047 3 132 1.96E-40 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02090 9d5f6e9077911c933b6de018bd100b3c 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02090 9d5f6e9077911c933b6de018bd100b3c 132 Pfam PF00410 Ribosomal protein S8 5 132 2.1E-43 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_03035 5fc57ad8d8377221aa5fc7da272219b8 415 Pfam PF02687 FtsX-like permease family 302 408 4.4E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 IM40_03035 5fc57ad8d8377221aa5fc7da272219b8 415 Pfam PF12704 MacB-like periplasmic core domain 30 232 6.6E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain IM40_03035 5fc57ad8d8377221aa5fc7da272219b8 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 415 5.8E-142 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 IM40_10300 a0428d6941867738655216c5c4517865 232 SUPERFAMILY SSF81383 33 91 2.49E-13 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_10300 a0428d6941867738655216c5c4517865 232 SMART SM00256 47 87 5.2E-4 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_10300 a0428d6941867738655216c5c4517865 232 Pfam PF12937 F-box-like 44 87 8.6E-9 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_10300 a0428d6941867738655216c5c4517865 232 TIGRFAM TIGR02913 HAF_rpt: probable extracellular repeat, HAF family 131 173 3.8E-7 T 14-10-2018 IPR014262 Extracellular HAF IM40_10300 a0428d6941867738655216c5c4517865 232 Gene3D G3DSA:1.20.1280.50 32 117 4.0E-12 T 14-10-2018 IM40_05580 b0e1b7bb47ef279cc8603f778d094408 607 SUPERFAMILY SSF53850 50 602 1.43E-115 T 14-10-2018 IM40_05580 b0e1b7bb47ef279cc8603f778d094408 607 Gene3D G3DSA:3.40.190.10 27 600 2.8E-229 T 14-10-2018 IM40_05580 b0e1b7bb47ef279cc8603f778d094408 607 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 104 518 5.6E-71 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain IM40_05580 b0e1b7bb47ef279cc8603f778d094408 607 Gene3D G3DSA:3.10.105.10 321 580 2.8E-229 T 14-10-2018 IM40_05580 b0e1b7bb47ef279cc8603f778d094408 607 PIRSF PIRSF002741 29 603 1.8E-99 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 IM40_04890 a0deacb6ee810be4abd91a4fc5fc8160 405 SUPERFAMILY SSF51713 7 393 7.19E-124 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IM40_04890 a0deacb6ee810be4abd91a4fc5fc8160 405 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 9 393 4.1E-131 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IM40_04890 a0deacb6ee810be4abd91a4fc5fc8160 405 Pfam PF01702 Queuine tRNA-ribosyltransferase 153 393 2.1E-72 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IM40_04890 a0deacb6ee810be4abd91a4fc5fc8160 405 Gene3D G3DSA:3.20.20.105 1 402 7.2E-147 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IM40_04890 a0deacb6ee810be4abd91a4fc5fc8160 405 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 7 401 47.658 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IM40_04890 a0deacb6ee810be4abd91a4fc5fc8160 405 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 9 392 6.2E-125 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IM40_10440 d8038271d62b7161e294e25ae090fc7c 345 Pfam PF00268 Ribonucleotide reductase, small chain 15 277 1.6E-63 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10440 d8038271d62b7161e294e25ae090fc7c 345 SUPERFAMILY SSF47240 11 327 2.43E-74 T 14-10-2018 IPR009078 Ferritin-like superfamily IM40_10440 d8038271d62b7161e294e25ae090fc7c 345 PIRSF PIRSF000355 1 329 4.6E-91 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_10440 d8038271d62b7161e294e25ae090fc7c 345 Gene3D G3DSA:1.10.620.20 11 319 3.0E-77 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 IM40_01455 63e084a97750c75424ed0ce7746f8e84 199 SUPERFAMILY SSF89392 30 195 1.88E-30 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX IM40_01455 63e084a97750c75424ed0ce7746f8e84 199 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 40 195 6.2E-32 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like IM40_01455 63e084a97750c75424ed0ce7746f8e84 199 Gene3D G3DSA:2.50.20.10 31 197 2.1E-30 T 14-10-2018 IM40_10395 e2f9d5d44ff9f18b74ab1c3cc3beb725 102 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 85 3.9E-28 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 IM40_10395 e2f9d5d44ff9f18b74ab1c3cc3beb725 102 Gene3D G3DSA:1.10.260.40 1 99 8.2E-31 T 14-10-2018 IM40_10395 e2f9d5d44ff9f18b74ab1c3cc3beb725 102 Pfam PF01381 Helix-turn-helix 19 70 3.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_10395 e2f9d5d44ff9f18b74ab1c3cc3beb725 102 SMART SM00530 15 71 2.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_10395 e2f9d5d44ff9f18b74ab1c3cc3beb725 102 SUPERFAMILY SSF47413 12 92 4.1E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_09025 55faf694620b866ee9402d56cbe6f8fb 149 PIRSF PIRSF004638 2 149 7.3E-52 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 IM40_09025 55faf694620b866ee9402d56cbe6f8fb 149 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 9 149 1.2E-47 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 IM40_09025 55faf694620b866ee9402d56cbe6f8fb 149 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 149 2.0E-52 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 IM40_05270 a64271951f2080d1667cbec9ecf3cb54 233 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 233 52.706 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein IM40_05270 a64271951f2080d1667cbec9ecf3cb54 233 Pfam PF03749 Sugar fermentation stimulation protein 13 224 1.2E-73 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein IM40_05270 a64271951f2080d1667cbec9ecf3cb54 233 Gene3D G3DSA:2.40.50.580 1 80 4.9E-25 T 14-10-2018 IM40_05270 a64271951f2080d1667cbec9ecf3cb54 233 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 228 8.5E-66 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein IM40_05270 a64271951f2080d1667cbec9ecf3cb54 233 Gene3D G3DSA:3.40.1350.60 81 233 4.6E-55 T 14-10-2018 IM40_00780 089966a839f1e65a40feeb18116816dc 95 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 10 79 4.5E-34 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 IM40_05510 b7be59889b8c133196cae58a44381344 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 288 6.6E-28 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IM40_05510 b7be59889b8c133196cae58a44381344 398 Gene3D G3DSA:2.40.420.20 299 366 1.1E-72 T 14-10-2018 IM40_05510 b7be59889b8c133196cae58a44381344 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 367 5.1E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IM40_05510 b7be59889b8c133196cae58a44381344 398 Gene3D G3DSA:2.40.30.170 75 298 1.1E-72 T 14-10-2018 IM40_05510 b7be59889b8c133196cae58a44381344 398 Gene3D G3DSA:1.10.287.470 122 181 1.1E-72 T 14-10-2018 IM40_05510 b7be59889b8c133196cae58a44381344 398 SUPERFAMILY SSF111369 77 294 2.62E-43 T 14-10-2018 IM40_05510 b7be59889b8c133196cae58a44381344 398 Gene3D G3DSA:2.40.50.100 87 215 1.1E-72 T 14-10-2018 IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-6 T 14-10-2018 IPR006015 Universal stress protein A IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 PRINTS PR01438 Universal stress protein signature 255 277 3.4E-6 T 14-10-2018 IPR006015 Universal stress protein A IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 PRINTS PR01438 Universal stress protein signature 237 249 3.4E-6 T 14-10-2018 IPR006015 Universal stress protein A IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 Gene3D G3DSA:3.40.50.12370 3 276 3.4E-53 T 14-10-2018 IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 SUPERFAMILY SSF52402 156 275 2.93E-18 T 14-10-2018 IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 SUPERFAMILY SSF52402 1 150 5.86E-16 T 14-10-2018 IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 Pfam PF00582 Universal stress protein family 155 274 6.8E-10 T 14-10-2018 IPR006016 UspA IM40_04150 fd81fdb4a12250ccc5b2f10c7f461ab5 277 Pfam PF00582 Universal stress protein family 1 119 2.8E-8 T 14-10-2018 IPR006016 UspA IM40_11320 87c620ff619430030078e87352cc053f 68 PRINTS PR01727 Prokaryotic integration host factor signature 17 32 1.7E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 PRINTS PR01727 Prokaryotic integration host factor signature 51 65 1.7E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 PRINTS PR01727 Prokaryotic integration host factor signature 35 48 1.7E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 23 42 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 SUPERFAMILY SSF47729 12 67 5.0E-20 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 Gene3D G3DSA:4.10.520.10 10 68 3.5E-22 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 SMART SM00411 1 67 6.2E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_11320 87c620ff619430030078e87352cc053f 68 Pfam PF00216 Bacterial DNA-binding protein 13 67 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09450 da388a32773996b1ebdc2ebe3abd8617 446 SUPERFAMILY SSF81901 266 385 3.01E-9 T 14-10-2018 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 SUPERFAMILY SSF52943 3 298 4.84E-83 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 298 3.0E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 Gene3D G3DSA:3.40.1380.10 61 217 2.5E-91 T 14-10-2018 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 PRINTS PR00126 ATP synthase gamma subunit signature 276 297 6.8E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 6.8E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 6.8E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 PRINTS PR00126 ATP synthase gamma subunit signature 245 264 6.8E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 298 32.298 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 Pfam PF00231 ATP synthase 3 298 2.3E-91 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 Gene3D G3DSA:1.10.287.80 6 294 2.5E-91 T 14-10-2018 IM40_05085 29d77cbf4fc6c2973bd24c1e6be5fcec 298 PIRSF PIRSF039089 1 298 1.6E-92 T 14-10-2018 IM40_05310 69de6182395e1bd2670832cef66d3969 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 8.9E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like IM40_05310 69de6182395e1bd2670832cef66d3969 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 18.44 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 SUPERFAMILY SSF46785 1 111 5.29E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 Gene3D G3DSA:3.40.190.290 91 289 5.1E-34 T 14-10-2018 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 SUPERFAMILY SSF53850 88 292 2.17E-30 T 14-10-2018 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 Pfam PF03466 LysR substrate binding domain 87 288 5.8E-27 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03890 6107df2248b3ad01f2033aff5abd2fc2 297 Gene3D G3DSA:1.10.10.10 1 90 4.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 Gene3D G3DSA:3.40.190.290 91 292 5.8E-37 T 14-10-2018 IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 Pfam PF03466 LysR substrate binding domain 88 291 2.7E-24 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 SUPERFAMILY SSF53850 89 292 8.87E-27 T 14-10-2018 IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 Gene3D G3DSA:1.10.10.10 1 90 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_03875 0985ed56b2e1da955f0917a5b024d78c 294 SUPERFAMILY SSF46785 1 110 3.11E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_05200 465ef8c04a92d6b8f930a9cf88e18027 218 Gene3D G3DSA:1.10.3720.10 1 218 1.2E-54 T 14-10-2018 IPR035906 MetI-like superfamily IM40_05200 465ef8c04a92d6b8f930a9cf88e18027 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 4.9E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IM40_05200 465ef8c04a92d6b8f930a9cf88e18027 218 SUPERFAMILY SSF161098 12 215 3.79E-43 T 14-10-2018 IPR035906 MetI-like superfamily IM40_05200 465ef8c04a92d6b8f930a9cf88e18027 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 109 2.2E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 IM40_03910 2c48a6a23a2650c8cf1dd93184ee72ac 1331 Gene3D G3DSA:1.10.510.10 871 1257 5.9E-19 T 14-10-2018 IM40_03910 2c48a6a23a2650c8cf1dd93184ee72ac 1331 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 879 902 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 IM40_03910 2c48a6a23a2650c8cf1dd93184ee72ac 1331 Pfam PF00069 Protein kinase domain 878 1175 6.1E-12 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IM40_03910 2c48a6a23a2650c8cf1dd93184ee72ac 1331 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1019 1031 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 IM40_03910 2c48a6a23a2650c8cf1dd93184ee72ac 1331 SMART SM00220 873 1183 1.1E-7 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IM40_03910 2c48a6a23a2650c8cf1dd93184ee72ac 1331 SUPERFAMILY SSF56112 878 1184 1.13E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_06300 79e4dd6d01d3158b24d6ec73b1e4b288 143 SUPERFAMILY SSF55961 1 139 7.34E-27 T 14-10-2018 IM40_06300 79e4dd6d01d3158b24d6ec73b1e4b288 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 2.7E-26 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 IM40_06300 79e4dd6d01d3158b24d6ec73b1e4b288 143 Gene3D G3DSA:3.30.530.20 1 143 9.9E-42 T 14-10-2018 IPR023393 START-like domain superfamily IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 SMART SM00662 26 233 2.3E-90 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 SUPERFAMILY SSF56553 56 177 1.31E-39 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 157 5.5E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 32 227 4.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 318 4.4E-116 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 318 36.171 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 264 329 7.0E-27 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 SUPERFAMILY SSF55257 17 236 1.16E-28 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Gene3D G3DSA:3.30.1360.10 24 227 2.1E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Gene3D G3DSA:2.170.120.12 56 176 2.1E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Gene3D G3DSA:1.10.150.20 247 330 4.9E-36 T 14-10-2018 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 252 309 1.3E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_02140 ce8de2663b5fe044eef319b6cd7ea982 338 SUPERFAMILY SSF47789 253 327 3.79E-27 T 14-10-2018 IM40_05105 4621be02e6bc4dfe9efc047e55bc1844 304 SUPERFAMILY SSF103481 40 135 1.44E-6 T 14-10-2018 IM40_05105 4621be02e6bc4dfe9efc047e55bc1844 304 Pfam PF00892 EamA-like transporter family 6 131 2.1E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_05105 4621be02e6bc4dfe9efc047e55bc1844 304 Pfam PF00892 EamA-like transporter family 144 279 2.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_05105 4621be02e6bc4dfe9efc047e55bc1844 304 SUPERFAMILY SSF103481 204 284 1.31E-11 T 14-10-2018 IM40_04565 5404c55ea4bb33d32d3be8a1b1c34410 455 Pfam PF13432 Tetratricopeptide repeat 279 343 6.2E-10 T 14-10-2018 IM40_04565 5404c55ea4bb33d32d3be8a1b1c34410 455 Gene3D G3DSA:3.30.2010.10 32 115 5.7E-7 T 14-10-2018 IM40_04565 5404c55ea4bb33d32d3be8a1b1c34410 455 Pfam PF01435 Peptidase family M48 43 227 1.2E-26 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 IM40_04565 5404c55ea4bb33d32d3be8a1b1c34410 455 Gene3D G3DSA:1.25.40.10 194 451 1.1E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_04565 5404c55ea4bb33d32d3be8a1b1c34410 455 SUPERFAMILY SSF48452 273 395 1.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 SUPERFAMILY SSF52540 382 693 3.89E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 Gene3D G3DSA:3.40.50.300 401 708 2.9E-114 T 14-10-2018 IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 SUPERFAMILY SSF46785 723 786 8.94E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 SMART SM00843 723 788 6.3E-37 T 14-10-2018 IPR018541 FtsK gamma domain IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 Gene3D G3DSA:3.30.980.40 295 400 2.2E-28 T 14-10-2018 IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 Pfam PF09397 Ftsk gamma domain 726 785 1.3E-27 T 14-10-2018 IPR018541 FtsK gamma domain IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 Pfam PF01580 FtsK/SpoIIIE family 404 623 3.9E-65 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 Gene3D G3DSA:1.10.10.10 720 784 7.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 25 182 1.2E-24 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region IM40_01460 a30d3c69dddc16b1075dea579987bb20 789 SMART SM00382 439 644 0.0081 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_08050 ebce04c0816d5b1a8718a62cd17547bc 81 SUPERFAMILY SSF47598 1 42 9.23E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_08050 ebce04c0816d5b1a8718a62cd17547bc 81 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 58 1.7E-18 T 14-10-2018 IPR022789 Antitoxin ParD IM40_08050 ebce04c0816d5b1a8718a62cd17547bc 81 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 55 5.3E-11 T 14-10-2018 IPR022789 Antitoxin ParD IM40_08050 ebce04c0816d5b1a8718a62cd17547bc 81 Gene3D G3DSA:1.10.8.1250 7 81 2.0E-13 T 14-10-2018 IPR038296 Antitoxin ParD superfamily IM40_08475 ebce04c0816d5b1a8718a62cd17547bc 81 SUPERFAMILY SSF47598 1 42 9.23E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_08475 ebce04c0816d5b1a8718a62cd17547bc 81 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 58 1.7E-18 T 14-10-2018 IPR022789 Antitoxin ParD IM40_08475 ebce04c0816d5b1a8718a62cd17547bc 81 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 55 5.3E-11 T 14-10-2018 IPR022789 Antitoxin ParD IM40_08475 ebce04c0816d5b1a8718a62cd17547bc 81 Gene3D G3DSA:1.10.8.1250 7 81 2.0E-13 T 14-10-2018 IPR038296 Antitoxin ParD superfamily IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 330 4.2E-68 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 1.5E-35 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-35 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 1.5E-35 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 1.5E-35 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.5E-35 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 469 2.0E-167 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 Gene3D G3DSA:3.30.390.30 350 470 2.7E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 Gene3D G3DSA:3.50.50.60 6 335 6.8E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 2.9E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 5.4E-64 T 14-10-2018 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 Gene3D G3DSA:3.50.50.60 156 277 6.8E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 SUPERFAMILY SSF51905 2 340 2.68E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 PIRSF PIRSF000350 1 465 4.0E-79 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IM40_06310 c3cb779138af8d2020a4df7328b9bdae 470 SUPERFAMILY SSF55424 349 469 2.58E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IM40_02870 e293d363abb9fb327b93f361a05b259d 284 Pfam PF08478 POTRA domain, FtsQ-type 76 144 2.2E-17 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type IM40_02870 e293d363abb9fb327b93f361a05b259d 284 Gene3D G3DSA:3.10.20.310 76 144 1.1E-13 T 14-10-2018 IM40_02870 e293d363abb9fb327b93f361a05b259d 284 Gene3D G3DSA:3.40.50.11690 146 270 2.1E-12 T 14-10-2018 IM40_02870 e293d363abb9fb327b93f361a05b259d 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 46 276 17.943 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 IM40_02870 e293d363abb9fb327b93f361a05b259d 284 Pfam PF03799 Cell division protein FtsQ 148 261 3.1E-15 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB IM40_02530 bd9a186c7122289b4ab4fe70865402ad 300 Gene3D G3DSA:3.40.630.30 45 227 2.4E-14 T 14-10-2018 IM40_02530 bd9a186c7122289b4ab4fe70865402ad 300 SUPERFAMILY SSF55729 55 218 1.35E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_02530 bd9a186c7122289b4ab4fe70865402ad 300 Pfam PF13302 Acetyltransferase (GNAT) domain 124 216 1.7E-6 T 14-10-2018 IPR000182 GNAT domain IM40_02675 46b998391dcbc3c85e8eba3cf934c5d9 141 Gene3D G3DSA:1.10.490.110 1 141 7.3E-38 T 14-10-2018 IM40_02675 46b998391dcbc3c85e8eba3cf934c5d9 141 Pfam PF10025 Uncharacterized conserved protein (DUF2267) 14 135 2.9E-24 T 14-10-2018 IPR018727 Protein of unknown function DUF2267 IM40_05225 24287077e85883b0cf005844e77037a0 161 Pfam PF14366 Domain of unknown function (DUF4410) 69 119 3.8E-8 T 14-10-2018 IPR025522 Protein of unknown function DUF4410 IM40_05585 8887a13544dd1f2b3cadf0d5fb198223 262 SUPERFAMILY SSF81452 5 259 5.34E-94 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_05585 8887a13544dd1f2b3cadf0d5fb198223 262 Gene3D G3DSA:1.10.287.70 2 70 5.1E-23 T 14-10-2018 IM40_05585 8887a13544dd1f2b3cadf0d5fb198223 262 Pfam PF00510 Cytochrome c oxidase subunit III 7 260 7.6E-96 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_05585 8887a13544dd1f2b3cadf0d5fb198223 262 Gene3D G3DSA:1.20.120.80 71 260 1.0E-74 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 Gene3D G3DSA:3.30.860.10 1 92 1.9E-38 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 SUPERFAMILY SSF54570 3 84 1.96E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 PIRSF PIRSF002144 1 92 4.3E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.4E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.4E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.4E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.827 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 Pfam PF00203 Ribosomal protein S19 3 83 6.7E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02040 a9a2b1c6cd969415b20d69274c6613ba 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 2.3E-42 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 IM40_06810 817f58b6649044085ce741768ec2c7d0 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_06810 817f58b6649044085ce741768ec2c7d0 295 SUPERFAMILY SSF53850 89 289 2.35E-26 T 14-10-2018 IM40_06810 817f58b6649044085ce741768ec2c7d0 295 Gene3D G3DSA:3.40.190.290 90 288 6.5E-35 T 14-10-2018 IM40_06810 817f58b6649044085ce741768ec2c7d0 295 SUPERFAMILY SSF46785 1 109 5.7E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_06810 817f58b6649044085ce741768ec2c7d0 295 Gene3D G3DSA:1.10.10.10 1 89 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06810 817f58b6649044085ce741768ec2c7d0 295 Pfam PF03466 LysR substrate binding domain 89 285 9.6E-24 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_08005 7ef842974d97d7dba6d211ad0e1da61d 163 Pfam PF13610 DDE domain 76 161 8.4E-20 T 14-10-2018 IPR032874 DDE domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF00550 Phosphopantetheine attachment site 2045 2107 2.3E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF00550 Phosphopantetheine attachment site 982 1044 4.4E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.40.50.12780 456 858 2.3E-125 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF56801 1508 2056 9.29E-155 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF52777 186 450 1.08E-59 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.40.50.12780 1518 1924 2.0E-138 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1668 1679 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF56801 420 991 1.27E-143 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 ProSitePatterns PS00455 Putative AMP-binding domain signature. 604 615 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF52777 1067 1245 8.34E-42 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF00501 AMP-binding enzyme 1528 1932 6.3E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF00501 AMP-binding enzyme 463 865 1.3E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1004 1019 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF52777 4 182 2.36E-45 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:1.10.1200.10 2032 2116 1.2E-21 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:1.10.1200.10 970 1051 8.9E-20 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1549 1956 4.3E-135 T 14-10-2018 IPR010071 Amino acid adenylation domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 484 890 1.1E-122 T 14-10-2018 IPR010071 Amino acid adenylation domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.30.559.10 4 372 1.0E-128 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF00668 Condensation domain 1066 1499 7.1E-83 T 14-10-2018 IPR001242 Condensation domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF00668 Condensation domain 3 443 6.2E-105 T 14-10-2018 IPR001242 Condensation domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF52777 1251 1495 2.78E-40 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.30.300.30 1926 2031 6.5E-33 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.30.300.30 860 969 1.6E-23 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF47336 2037 2108 1.7E-16 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 SUPERFAMILY SSF47336 974 1044 2.36E-14 T 14-10-2018 IPR036736 ACP-like superfamily IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.30.559.10 1066 1433 1.4E-105 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.30.559.30 1249 1490 1.4E-105 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Gene3D G3DSA:3.30.559.30 186 426 1.0E-128 T 14-10-2018 IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF13193 AMP-binding enzyme C-terminal domain 874 952 4.6E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_02410 b4684ea81c154d6a29eacdd8ecdaf2ac 2121 Pfam PF13193 AMP-binding enzyme C-terminal domain 1940 2016 1.5E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_09785 c30d795a5bd8878ba06b29b0f1d7302b 1481 Gene3D G3DSA:3.40.50.300 460 599 2.0E-12 T 14-10-2018 IM40_09785 c30d795a5bd8878ba06b29b0f1d7302b 1481 SUPERFAMILY SSF52540 467 664 6.01E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03625 071b2cc594eb896584da0b7e6036605b 315 SMART SM00363 9 73 1.1E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 SUPERFAMILY SSF55120 69 312 4.8E-70 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 309 7.1E-87 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 Gene3D G3DSA:3.30.2350.10 75 313 1.5E-72 T 14-10-2018 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 129 143 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 Pfam PF01479 S4 domain 10 55 3.8E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 Pfam PF00849 RNA pseudouridylate synthase 82 239 7.0E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 SUPERFAMILY SSF55174 7 95 2.69E-11 T 14-10-2018 IM40_03625 071b2cc594eb896584da0b7e6036605b 315 Gene3D G3DSA:3.10.290.10 1 63 3.5E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 5.7E-98 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 41.018 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 Gene3D G3DSA:3.30.230.20 1 128 8.7E-46 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 SUPERFAMILY SSF54211 2 126 4.4E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 Gene3D G3DSA:3.30.1700.10 129 303 4.1E-57 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 SUPERFAMILY SSF54211 134 277 1.06E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_03685 fa013ec4d0230987cb9e17628d85430d 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 291 3.1E-93 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 SMART SM00671 391 422 0.0011 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 SMART SM00671 351 390 47.0 T 14-10-2018 IPR006597 Sel1-like repeat IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 Gene3D G3DSA:1.25.40.10 330 435 1.0E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 SUPERFAMILY SSF81901 343 428 2.75E-13 T 14-10-2018 IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 Gene3D G3DSA:3.40.630.30 27 207 4.1E-6 T 14-10-2018 IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 Pfam PF13374 Tetratricopeptide repeat 391 417 6.1E-6 T 14-10-2018 IM40_09350 7286e77dfc0bd48286ac4c33625dca95 438 SUPERFAMILY SSF55729 93 206 1.86E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_00665 e3e3201f39ce6ef79407d220db92b7ee 146 Gene3D G3DSA:2.40.50.140 30 136 1.9E-32 T 14-10-2018 IM40_00665 e3e3201f39ce6ef79407d220db92b7ee 146 SUPERFAMILY SSF82093 30 133 1.44E-31 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 IM40_00665 e3e3201f39ce6ef79407d220db92b7ee 146 Pfam PF03100 CcmE 5 131 3.0E-37 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 IM40_00665 e3e3201f39ce6ef79407d220db92b7ee 146 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 25.759 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 IM40_09850 65ac7eba823e37598a5f0725fcc7bf5a 214 SUPERFAMILY SSF52540 1 212 1.55E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09850 65ac7eba823e37598a5f0725fcc7bf5a 214 Gene3D G3DSA:3.40.50.300 2 213 1.3E-40 T 14-10-2018 IM40_09850 65ac7eba823e37598a5f0725fcc7bf5a 214 PIRSF PIRSF009320 2 214 3.4E-36 T 14-10-2018 IM40_09850 65ac7eba823e37598a5f0725fcc7bf5a 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 188 6.8E-10 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IM40_03055 9d555a0c4fcdeda2d81999630bd1a7a7 137 Hamap MF_00791 Protein ApaG [apaG]. 9 137 28.568 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG IM40_03055 9d555a0c4fcdeda2d81999630bd1a7a7 137 Pfam PF04379 ApaG domain 27 111 2.4E-31 T 14-10-2018 IPR007474 ApaG domain IM40_03055 9d555a0c4fcdeda2d81999630bd1a7a7 137 SUPERFAMILY SSF110069 12 134 1.31E-43 T 14-10-2018 IPR036767 ApaG domain superfamily IM40_03055 9d555a0c4fcdeda2d81999630bd1a7a7 137 Gene3D G3DSA:2.60.40.1470 5 136 4.9E-44 T 14-10-2018 IPR036767 ApaG domain superfamily IM40_00050 38af9dc2b1f2db68ed362165c1b32703 557 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 64 232 9.5E-57 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 IM40_00050 38af9dc2b1f2db68ed362165c1b32703 557 SUPERFAMILY SSF53474 191 474 1.38E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_00050 38af9dc2b1f2db68ed362165c1b32703 557 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 1 27 4.5E-11 T 14-10-2018 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 Gene3D G3DSA:3.10.580.10 194 319 1.1E-39 T 14-10-2018 IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 PIRSF PIRSF004692 1 322 2.5E-127 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 Pfam PF01380 SIS domain 41 167 2.5E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 312 8.4E-89 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 SUPERFAMILY SSF53697 3 319 6.45E-61 T 14-10-2018 IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 Pfam PF00571 CBS domain 198 253 3.4E-7 T 14-10-2018 IPR000644 CBS domain IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 Pfam PF00571 CBS domain 263 319 2.5E-8 T 14-10-2018 IPR000644 CBS domain IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 Gene3D G3DSA:3.40.50.10490 2 193 9.6E-61 T 14-10-2018 IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 SMART SM00116 207 255 0.087 T 14-10-2018 IPR000644 CBS domain IM40_00295 a2e2ea1812c31e0f70c24bc93279b065 322 SMART SM00116 270 321 0.069 T 14-10-2018 IPR000644 CBS domain IM40_08885 394f089aadd83cf201e084b6ad83ecfc 264 Gene3D G3DSA:3.40.50.1860 129 246 1.0E-54 T 14-10-2018 IM40_08885 394f089aadd83cf201e084b6ad83ecfc 264 TIGRFAM TIGR00035 asp_race: aspartate racemase 7 259 4.6E-35 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 IM40_08885 394f089aadd83cf201e084b6ad83ecfc 264 SUPERFAMILY SSF53681 7 113 8.5E-8 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_08885 394f089aadd83cf201e084b6ad83ecfc 264 SUPERFAMILY SSF53681 143 259 7.03E-20 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_08885 394f089aadd83cf201e084b6ad83ecfc 264 Gene3D G3DSA:3.40.50.1860 8 252 1.0E-54 T 14-10-2018 IM40_08885 394f089aadd83cf201e084b6ad83ecfc 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 254 2.6E-33 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_06475 1b05b6489d307bd7de11fabf06393939 175 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 173 30.548 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IM40_06475 1b05b6489d307bd7de11fabf06393939 175 SUPERFAMILY SSF50486 2 167 2.04E-57 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 IM40_06475 1b05b6489d307bd7de11fabf06393939 175 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 5 167 1.5E-43 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IM40_06475 1b05b6489d307bd7de11fabf06393939 175 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 8 166 8.2E-57 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IM40_06475 1b05b6489d307bd7de11fabf06393939 175 Gene3D G3DSA:3.10.300.10 1 173 8.4E-56 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IM40_05690 6deaa3a183a0523fb5e2df6f4a66c3d2 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site IM40_05690 6deaa3a183a0523fb5e2df6f4a66c3d2 149 SUPERFAMILY SSF46785 2 135 7.93E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_05690 6deaa3a183a0523fb5e2df6f4a66c3d2 149 Gene3D G3DSA:1.10.10.10 1 142 3.3E-45 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_05690 6deaa3a183a0523fb5e2df6f4a66c3d2 149 Pfam PF02082 Transcriptional regulator 1 82 7.7E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type IM40_05690 6deaa3a183a0523fb5e2df6f4a66c3d2 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 4.6E-40 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type IM40_06845 8f7b49d19d23a6e5055d4bd7a588d7ed 79 Pfam PF01722 BolA-like protein 29 76 3.9E-14 T 14-10-2018 IPR002634 BolA protein IM40_06845 8f7b49d19d23a6e5055d4bd7a588d7ed 79 PIRSF PIRSF003113 1 79 6.5E-20 T 14-10-2018 IPR002634 BolA protein IM40_06845 8f7b49d19d23a6e5055d4bd7a588d7ed 79 SUPERFAMILY SSF82657 1 76 1.7E-20 T 14-10-2018 IPR036065 BolA-like superfamily IM40_06845 8f7b49d19d23a6e5055d4bd7a588d7ed 79 Gene3D G3DSA:3.30.300.90 4 75 8.6E-26 T 14-10-2018 IM40_07440 e74d73cfc0a8f4b192a9565e6cea5613 203 Pfam PF13462 Thioredoxin 36 196 4.7E-33 T 14-10-2018 IPR012336 Thioredoxin-like fold IM40_07440 e74d73cfc0a8f4b192a9565e6cea5613 203 Gene3D G3DSA:3.40.30.10 19 201 2.6E-30 T 14-10-2018 IM40_07440 e74d73cfc0a8f4b192a9565e6cea5613 203 SUPERFAMILY SSF52833 28 196 3.28E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_10955 f00430da0c43dbd88e59f0b64b192448 181 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 3 148 3.2E-30 T 14-10-2018 IPR012912 Plasmid pRiA4b, Orf3 IM40_10955 f00430da0c43dbd88e59f0b64b192448 181 SUPERFAMILY SSF159941 1 173 8.89E-38 T 14-10-2018 IPR024047 MM3350-like superfamily IM40_10955 f00430da0c43dbd88e59f0b64b192448 181 Gene3D G3DSA:3.10.290.30 1 173 2.6E-32 T 14-10-2018 IPR024047 MM3350-like superfamily IM40_09480 f00430da0c43dbd88e59f0b64b192448 181 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 3 148 3.2E-30 T 14-10-2018 IPR012912 Plasmid pRiA4b, Orf3 IM40_09480 f00430da0c43dbd88e59f0b64b192448 181 SUPERFAMILY SSF159941 1 173 8.89E-38 T 14-10-2018 IPR024047 MM3350-like superfamily IM40_09480 f00430da0c43dbd88e59f0b64b192448 181 Gene3D G3DSA:3.10.290.30 1 173 2.6E-32 T 14-10-2018 IPR024047 MM3350-like superfamily IM40_05170 d01086ccaf878d22451b250d37affe95 81 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.7E-22 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_05170 d01086ccaf878d22451b250d37affe95 81 SMART SM00530 6 62 1.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_05170 d01086ccaf878d22451b250d37affe95 81 Gene3D G3DSA:1.10.260.40 2 71 2.6E-12 T 14-10-2018 IM40_05170 d01086ccaf878d22451b250d37affe95 81 SUPERFAMILY SSF47413 2 67 5.09E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_06685 506d98def0ff383a84bf439ab6007860 540 Pfam PF13450 NAD(P)-binding Rossmann-like domain 11 56 1.4E-6 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 Gene3D G3DSA:3.30.9.90 78 440 5.0E-201 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 SUPERFAMILY SSF54373 206 302 2.16E-38 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 436 537 4.1E-49 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 SUPERFAMILY SSF51905 6 438 4.45E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06685 506d98def0ff383a84bf439ab6007860 540 SUPERFAMILY SSF54862 440 540 1.01E-26 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 2.5E-5 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.5E-5 T 14-10-2018 IM40_06685 506d98def0ff383a84bf439ab6007860 540 Gene3D G3DSA:3.50.50.60 7 379 5.0E-201 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_06685 506d98def0ff383a84bf439ab6007860 540 Gene3D G3DSA:3.30.70.20 441 535 5.8E-38 T 14-10-2018 IM40_01130 736ace92671740d45723a948fb22f90b 369 Gene3D G3DSA:1.10.3720.10 126 356 1.9E-13 T 14-10-2018 IPR035906 MetI-like superfamily IM40_01130 736ace92671740d45723a948fb22f90b 369 SUPERFAMILY SSF161098 134 350 7.85E-14 T 14-10-2018 IPR035906 MetI-like superfamily IM40_01130 736ace92671740d45723a948fb22f90b 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 362 2.3E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IM40_01210 17c39b053f628d43bb606b65d79119b0 110 PRINTS PR00355 Adrenodoxin signature 58 72 1.4E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IM40_01210 17c39b053f628d43bb606b65d79119b0 110 PRINTS PR00355 Adrenodoxin signature 81 89 1.4E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IM40_01210 17c39b053f628d43bb606b65d79119b0 110 PRINTS PR00355 Adrenodoxin signature 39 49 1.4E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IM40_01210 17c39b053f628d43bb606b65d79119b0 110 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 90 1.1E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IM40_01210 17c39b053f628d43bb606b65d79119b0 110 Gene3D G3DSA:3.10.20.30 2 110 8.6E-45 T 14-10-2018 IPR012675 Beta-grasp domain superfamily IM40_01210 17c39b053f628d43bb606b65d79119b0 110 SUPERFAMILY SSF54292 1 101 2.56E-34 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IM40_01210 17c39b053f628d43bb606b65d79119b0 110 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 SMART SM00436 106 194 1.2E-38 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Gene3D G3DSA:1.10.290.10 256 391 2.9E-169 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 SUPERFAMILY SSF57783 600 635 1.68E-7 T 14-10-2018 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Pfam PF13368 Topoisomerase C-terminal repeat 667 739 3.4E-11 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Pfam PF13368 Topoisomerase C-terminal repeat 742 794 1.5E-20 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Pfam PF01751 Toprim domain 3 114 1.2E-26 T 14-10-2018 IPR006171 TOPRIM domain IM40_06525 23ce4432003900594f7e4c079c9250aa 801 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 1.3E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 1.3E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 1.3E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 481 495 1.3E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 1.3E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 635 2.2E-245 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 763 54.065 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Gene3D G3DSA:2.70.20.10 186 465 2.9E-169 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 SMART SM00493 1 101 3.2E-30 T 14-10-2018 IPR006171 TOPRIM domain IM40_06525 23ce4432003900594f7e4c079c9250aa 801 SMART SM00437 248 518 6.2E-119 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Gene3D G3DSA:3.40.50.140 1 136 8.4E-48 T 14-10-2018 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Pfam PF01131 DNA topoisomerase 130 555 4.4E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 600 635 5.0E-12 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 IM40_06525 23ce4432003900594f7e4c079c9250aa 801 SUPERFAMILY SSF56712 1 608 1.96E-188 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain IM40_06525 23ce4432003900594f7e4c079c9250aa 801 Gene3D G3DSA:1.10.460.10 140 558 2.9E-169 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 SUPERFAMILY SSF54862 37 146 1.51E-28 T 14-10-2018 IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 3.2E-14 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 3.0E-51 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 147 28.857 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IM40_07300 76f7f0f6cd2b5d0bf7ca36c78e3a05ec 163 Gene3D G3DSA:3.30.70.3270 37 161 1.1E-41 T 14-10-2018 IM40_02850 a874de2fb20cb310cc6e5b9bf97f9f61 373 SUPERFAMILY SSF53756 3 359 1.11E-86 T 14-10-2018 IM40_02850 a874de2fb20cb310cc6e5b9bf97f9f61 373 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 351 2.3E-32 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 IM40_02850 a874de2fb20cb310cc6e5b9bf97f9f61 373 Gene3D G3DSA:3.40.50.2000 6 350 1.9E-86 T 14-10-2018 IM40_02850 a874de2fb20cb310cc6e5b9bf97f9f61 373 Gene3D G3DSA:3.40.50.2000 163 344 1.9E-86 T 14-10-2018 IM40_02850 a874de2fb20cb310cc6e5b9bf97f9f61 373 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 360 28.671 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_02850 a874de2fb20cb310cc6e5b9bf97f9f61 373 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 138 4.4E-26 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_03290 557c1dc65c75349aad6d834cec606698 238 Gene3D G3DSA:3.40.50.10090 133 234 3.8E-6 T 14-10-2018 IM40_03290 557c1dc65c75349aad6d834cec606698 238 SUPERFAMILY SSF69618 1 231 1.96E-36 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IM40_03290 557c1dc65c75349aad6d834cec606698 238 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 224 2.6E-23 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IM40_03290 557c1dc65c75349aad6d834cec606698 238 Gene3D G3DSA:3.40.50.10090 1 106 2.8E-13 T 14-10-2018 IM40_07535 067bd6c5f37b3317ea655545a158576c 387 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 138 8.6E-34 T 14-10-2018 IPR010657 ImpA, N-terminal IM40_07535 067bd6c5f37b3317ea655545a158576c 387 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 369 1.2E-83 T 14-10-2018 IPR017740 Type VI secretion system-associated, ImpA IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 SUPERFAMILY SSF52540 439 718 3.26E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Pfam PF14490 Helix-hairpin-helix containing domain 150 238 1.8E-33 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Pfam PF14520 Helix-hairpin-helix domain 98 141 2.2E-5 T 14-10-2018 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Pfam PF13538 UvrD-like helicase C-terminal domain 650 697 4.6E-19 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 SMART SM00382 343 487 0.0045 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 SUPERFAMILY SSF52540 190 488 4.69E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Gene3D G3DSA:3.40.50.300 488 713 3.3E-150 T 14-10-2018 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Gene3D G3DSA:2.30.30.940 579 650 3.3E-150 T 14-10-2018 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Gene3D G3DSA:1.10.150.20 84 150 1.6E-6 T 14-10-2018 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 10 722 28.04 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 SUPERFAMILY SSF47781 68 167 5.93E-9 T 14-10-2018 IPR010994 RuvA domain 2-like IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Pfam PF13604 AAA domain 329 508 2.4E-43 T 14-10-2018 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 14 721 1.6E-218 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Gene3D G3DSA:1.10.10.2220 190 286 1.8E-19 T 14-10-2018 IM40_08215 a41168a530d02c01aab09cc1ae62f9e3 725 Gene3D G3DSA:3.40.50.300 322 719 3.3E-150 T 14-10-2018 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 SUPERFAMILY SSF53807 17 291 5.89E-85 T 14-10-2018 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 289 8.0E-78 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 Gene3D G3DSA:3.40.50.1980 23 179 7.8E-47 T 14-10-2018 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00690 Adhesin family signature 257 276 1.5E-28 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00690 Adhesin family signature 23 41 1.5E-28 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00690 Adhesin family signature 54 67 1.5E-28 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00690 Adhesin family signature 67 84 1.5E-28 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00690 Adhesin family signature 178 199 1.5E-28 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00690 Adhesin family signature 231 249 1.5E-28 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 178 195 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 270 288 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 227 244 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 249 267 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 23 44 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 67 86 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 PRINTS PR00691 Adhesin B signature 48 66 7.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 IM40_07100 df6d1fcc37f08260b2fc38225ecb5e51 295 Gene3D G3DSA:3.40.50.1980 180 295 3.9E-41 T 14-10-2018 IM40_07735 9f50fa572ee0423f8ec8a94b39c2c36d 307 Pfam PF03741 Integral membrane protein TerC family 69 272 9.4E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 IM40_07735 9f50fa572ee0423f8ec8a94b39c2c36d 307 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 300 4.8E-119 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SUPERFAMILY SSF48452 447 639 7.11E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Pfam PF00931 NB-ARC domain 51 276 3.7E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Gene3D G3DSA:3.40.50.300 21 202 5.8E-17 T 14-10-2018 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 566 599 2.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 483 516 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 607 640 0.19 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 524 557 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 441 474 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 691 724 53.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SMART SM00028 649 682 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Gene3D G3DSA:1.25.40.10 685 799 1.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SUPERFAMILY SSF52540 35 276 4.21E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Pfam PF13424 Tetratricopeptide repeat 488 555 1.7E-12 T 14-10-2018 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Pfam PF13424 Tetratricopeptide repeat 569 639 9.8E-16 T 14-10-2018 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Pfam PF13424 Tetratricopeptide repeat 650 719 6.0E-9 T 14-10-2018 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 SUPERFAMILY SSF48452 602 742 3.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Gene3D G3DSA:1.25.40.10 634 684 2.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_09805 45213f9ccbaa968352226ae3bb3801ff 803 Gene3D G3DSA:1.25.40.10 442 633 7.3E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Gene3D G3DSA:1.10.150.20 80 148 3.0E-10 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Gene3D G3DSA:2.30.30.940 576 647 5.7E-149 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Pfam PF13538 UvrD-like helicase C-terminal domain 647 694 6.2E-18 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Gene3D G3DSA:3.40.50.300 485 710 5.7E-149 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Pfam PF14490 Helix-hairpin-helix containing domain 147 235 3.1E-31 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Pfam PF13604 AAA domain 327 505 3.0E-45 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 7 719 28.33 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 SUPERFAMILY SSF52540 318 699 8.39E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Gene3D G3DSA:3.40.50.300 319 716 5.7E-149 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Gene3D G3DSA:1.10.10.2220 187 279 4.6E-20 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 SUPERFAMILY SSF47781 85 164 2.82E-11 T 14-10-2018 IPR010994 RuvA domain 2-like IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 Pfam PF14520 Helix-hairpin-helix domain 95 144 6.1E-6 T 14-10-2018 IM40_10845 2c9b654612d7a2ecbb168a6bd6a545b3 722 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 10 718 5.3E-221 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 IM40_11310 d5cfc990028e72e985cc4e19f137d624 320 Pfam PF13614 AAA domain 59 232 1.3E-33 T 14-10-2018 IPR025669 AAA domain IM40_11310 d5cfc990028e72e985cc4e19f137d624 320 SUPERFAMILY SSF52540 57 310 8.82E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11310 d5cfc990028e72e985cc4e19f137d624 320 Gene3D G3DSA:3.40.50.300 24 314 8.7E-56 T 14-10-2018 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 SUPERFAMILY SSF56214 2 128 6.41E-29 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 Gene3D G3DSA:3.90.470.20 1 129 3.0E-37 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 128 7.1E-31 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 128 4.0E-11 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 25.382 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 104 2.6E-23 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IM40_06960 9d137eab9ef7ae43641e1747aa258b1a 130 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 128 3.1E-30 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 IM40_01395 42dc3553b1224541e07a517fad7c3937 80 Pfam PF01809 Haemolytic domain 9 72 8.8E-26 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IM40_01395 42dc3553b1224541e07a517fad7c3937 80 SMART SM01234 6 73 6.0E-33 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IM40_01395 42dc3553b1224541e07a517fad7c3937 80 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 10 77 2.7E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IM40_01395 42dc3553b1224541e07a517fad7c3937 80 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 6 74 22.217 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IM40_01395 42dc3553b1224541e07a517fad7c3937 80 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 21 73 3.0E-13 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IM40_05970 60e4135cb4b2966c6ed10620036ccffe 96 Pfam PF03083 Sugar efflux transporter for intercellular exchange 37 91 8.8E-7 T 14-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 IM40_05970 60e4135cb4b2966c6ed10620036ccffe 96 Gene3D G3DSA:1.20.1280.290 18 96 3.4E-11 T 14-10-2018 IM40_08620 4ab8f702de1752c74a9b1ac1c78ec062 370 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 355 5.7E-72 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 IM40_08620 4ab8f702de1752c74a9b1ac1c78ec062 370 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 355 2.3E-65 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 IM40_04335 8c55c80edb9239c72f74aa2193d38bf8 264 Gene3D G3DSA:3.40.50.1860 8 245 2.7E-43 T 14-10-2018 IM40_04335 8c55c80edb9239c72f74aa2193d38bf8 264 Gene3D G3DSA:3.40.50.1860 128 240 2.7E-43 T 14-10-2018 IM40_04335 8c55c80edb9239c72f74aa2193d38bf8 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 248 1.1E-24 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_04335 8c55c80edb9239c72f74aa2193d38bf8 264 SUPERFAMILY SSF53681 142 251 4.91E-19 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IM40_00320 b587698e09f2fe7935bd1b6f9ff2cee4 400 Pfam PF06965 Na+/H+ antiporter 1 7 382 1.0E-125 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 IM40_00320 b587698e09f2fe7935bd1b6f9ff2cee4 400 Gene3D G3DSA:1.20.1530.10 2 389 1.3E-128 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily IM40_00320 b587698e09f2fe7935bd1b6f9ff2cee4 400 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 382 1.6E-113 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 IM40_00320 b587698e09f2fe7935bd1b6f9ff2cee4 400 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 391 20.581 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 IM40_00560 9af37aa6ee6ebe74c93f5727e7dfa95a 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 10 194 1.1E-48 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 IM40_00560 9af37aa6ee6ebe74c93f5727e7dfa95a 198 Pfam PF01725 Ham1 family 10 194 2.5E-48 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 IM40_00560 9af37aa6ee6ebe74c93f5727e7dfa95a 198 Gene3D G3DSA:3.90.950.10 1 197 5.7E-62 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IM40_00560 9af37aa6ee6ebe74c93f5727e7dfa95a 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 8 198 41.222 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 IM40_00560 9af37aa6ee6ebe74c93f5727e7dfa95a 198 SUPERFAMILY SSF52972 8 196 2.22E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IM40_02370 da609f211528340de7bee5d850e3e656 94 SUPERFAMILY SSF143011 1 83 3.14E-21 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_02370 da609f211528340de7bee5d850e3e656 94 Gene3D G3DSA:3.30.2310.20 1 94 2.4E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_02370 da609f211528340de7bee5d850e3e656 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 84 2.3E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_02370 da609f211528340de7bee5d850e3e656 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 9.4E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.8E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 Gene3D G3DSA:3.90.1170.10 1 138 1.6E-57 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 SUPERFAMILY SSF54686 1 134 3.79E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.746 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_02055 090dd8e71f01763bdf868cfa8f812965 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.9E-49 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 8.5E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 8.5E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 8.5E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 Gene3D G3DSA:2.40.50.1030 6 83 1.0E-29 T 14-10-2018 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 82 3.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.3E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.618 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 Pfam PF01016 Ribosomal L27 protein 2 81 2.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 SUPERFAMILY SSF110324 2 82 4.97E-34 T 14-10-2018 IM40_03355 aee1bfe964cd0dcbbffc8e2333a2a657 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_08225 5de0a42af0ee2e59b8e5aaa667b1be95 85 Gene3D G3DSA:1.10.8.1250 7 84 6.4E-14 T 14-10-2018 IPR038296 Antitoxin ParD superfamily IM40_08225 5de0a42af0ee2e59b8e5aaa667b1be95 85 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 59 1.5E-18 T 14-10-2018 IPR022789 Antitoxin ParD IM40_08225 5de0a42af0ee2e59b8e5aaa667b1be95 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 55 3.5E-11 T 14-10-2018 IPR022789 Antitoxin ParD IM40_08225 5de0a42af0ee2e59b8e5aaa667b1be95 85 SUPERFAMILY SSF47598 1 42 3.67E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_05940 cd645154598f888a43223c9c89522ac4 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 8.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IM40_05940 cd645154598f888a43223c9c89522ac4 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 8.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IM40_05940 cd645154598f888a43223c9c89522ac4 78 PIRSF PIRSF002097 2 78 4.2E-24 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 IM40_05940 cd645154598f888a43223c9c89522ac4 78 SUPERFAMILY SSF46689 12 77 7.47E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_05940 cd645154598f888a43223c9c89522ac4 78 Gene3D G3DSA:1.10.10.60 2 77 8.6E-23 T 14-10-2018 IM40_05940 cd645154598f888a43223c9c89522ac4 78 Pfam PF02954 Bacterial regulatory protein, Fis family 35 75 1.5E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:2.40.50.100 1013 1114 6.0E-28 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 486 4.7E-33 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:2.40.50.100 938 1012 6.6E-22 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:1.10.40.90 375 417 5.1E-23 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:2.40.50.100 1139 1204 5.2E-64 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1366 18.772 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 643 6.0E-26 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 343 4.3E-90 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1305 2.6E-71 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:1.10.274.100 491 565 1.8E-24 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Pfam PF05000 RNA polymerase Rpb1, domain 4 672 752 1.2E-15 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:1.10.132.30 637 780 2.2E-61 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 SUPERFAMILY SSF64484 16 1352 0.0 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:1.10.1790.20 1123 1303 5.2E-64 T 14-10-2018 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 SMART SM00663 236 515 7.9E-182 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1352 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IM40_06210 427484452e3d80dc5168fb33f7184440 1394 Gene3D G3DSA:1.10.150.390 1305 1364 1.4E-27 T 14-10-2018 IM40_06225 b2454356d4bfaa077e24ec13a2625ee5 169 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 23.524 T 14-10-2018 IPR022973 Ribosomal protein L10 IM40_06225 b2454356d4bfaa077e24ec13a2625ee5 169 SUPERFAMILY SSF160369 3 168 1.31E-50 T 14-10-2018 IM40_06225 b2454356d4bfaa077e24ec13a2625ee5 169 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 168 1.0E-7 T 14-10-2018 IM40_06225 b2454356d4bfaa077e24ec13a2625ee5 169 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_06225 b2454356d4bfaa077e24ec13a2625ee5 169 Gene3D G3DSA:3.30.70.1730 1 131 2.4E-34 T 14-10-2018 IM40_06225 b2454356d4bfaa077e24ec13a2625ee5 169 Pfam PF00466 Ribosomal protein L10 3 97 7.3E-21 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 IM40_11380 40bfce7b1756fa92053fb02c8717a679 76 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 44 1.8E-8 T 14-10-2018 IM40_11380 40bfce7b1756fa92053fb02c8717a679 76 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 46 1.5E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM IM40_11380 40bfce7b1756fa92053fb02c8717a679 76 SUPERFAMILY SSF143120 1 46 1.7E-7 T 14-10-2018 IPR036165 YefM-like superfamily IM40_11380 40bfce7b1756fa92053fb02c8717a679 76 Gene3D G3DSA:3.40.1620.10 1 40 3.1E-9 T 14-10-2018 IM40_03350 80008191faf343e3bac02900063d0a37 180 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.3E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03350 80008191faf343e3bac02900063d0a37 180 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.793 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03350 80008191faf343e3bac02900063d0a37 180 SUPERFAMILY SSF141091 1 101 1.44E-36 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03350 80008191faf343e3bac02900063d0a37 180 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.2E-32 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_00375 048a1455796f632032f6d0bcaa71b34a 244 SUPERFAMILY SSF53335 30 191 6.92E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00375 048a1455796f632032f6d0bcaa71b34a 244 Pfam PF05175 Methyltransferase small domain 30 126 3.1E-9 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 IM40_00375 048a1455796f632032f6d0bcaa71b34a 244 Gene3D G3DSA:3.40.50.150 3 240 3.0E-51 T 14-10-2018 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 SUPERFAMILY SSF53697 48 421 1.57E-95 T 14-10-2018 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 395 412 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 Pfam PF00342 Phosphoglucose isomerase 364 417 5.6E-6 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 Pfam PF00342 Phosphoglucose isomerase 71 285 1.2E-22 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 Gene3D G3DSA:3.40.50.10490 17 422 2.1E-116 T 14-10-2018 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 PRINTS PR00662 Glucose-6-phosphate isomerase signature 189 207 5.3E-13 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 284 5.3E-13 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 5.3E-13 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 408 5.3E-13 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 PRINTS PR00662 Glucose-6-phosphate isomerase signature 363 381 5.3E-13 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IM40_00930 1c198ba7ba0e54336330b29dc8f888bc 424 Gene3D G3DSA:3.40.50.10490 57 213 2.1E-116 T 14-10-2018 IM40_01185 7df641ba2b52f8690ee6313ff83682d6 116 Pfam PF14359 Domain of unknown function (DUF4406) 48 107 1.0E-4 T 14-10-2018 IPR025518 Protein of unknown function DUF4406 IM40_01185 7df641ba2b52f8690ee6313ff83682d6 116 Gene3D G3DSA:3.40.50.10400 2 114 5.7E-5 T 14-10-2018 IPR027269 Hypothetical PA1492 domain superfamily IM40_01185 7df641ba2b52f8690ee6313ff83682d6 116 SUPERFAMILY SSF52309 8 107 4.67E-5 T 14-10-2018 IM40_09575 af6031e28085031fbe2d465a57e601c2 166 Pfam PF04985 Phage tail tube protein FII 3 165 1.6E-56 T 14-10-2018 IPR006498 Tail tube protein IM40_09575 af6031e28085031fbe2d465a57e601c2 166 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 1 165 2.7E-59 T 14-10-2018 IPR006498 Tail tube protein IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 SUPERFAMILY SSF160240 207 283 1.44E-20 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 Pfam PF16916 Dimerisation domain of Zinc Transporter 208 282 1.4E-22 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 Gene3D G3DSA:1.20.1510.10 4 202 6.1E-56 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 Pfam PF01545 Cation efflux family 9 201 3.9E-44 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 283 2.5E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 SUPERFAMILY SSF161111 3 203 3.27E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IM40_00230 b00f916b323b95d491d43a7c9426eadc 290 Gene3D G3DSA:3.30.70.1350 203 284 1.7E-26 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 SUPERFAMILY SSF52540 1 143 7.25E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 PIRSF PIRSF035805 1 190 2.0E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 Gene3D G3DSA:3.40.50.300 1 142 8.8E-28 T 14-10-2018 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 Gene3D G3DSA:3.30.60.20 144 189 2.0E-10 T 14-10-2018 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 SUPERFAMILY SSF57716 143 189 2.33E-17 T 14-10-2018 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 35.347 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 IM40_04195 0fd6cc72aaaf8f88b97463bbfa9fce06 190 Pfam PF00265 Thymidine kinase 2 187 7.3E-54 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 IM40_10765 3f0204695320de240e970121c3ce948e 91 Gene3D G3DSA:1.10.10.60 18 79 2.0E-5 T 14-10-2018 IM40_10765 3f0204695320de240e970121c3ce948e 91 Pfam PF01527 Transposase 2 74 7.9E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10765 3f0204695320de240e970121c3ce948e 91 SUPERFAMILY SSF46689 2 76 2.33E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_01235 a832674b57a6889e5d7349bcaa9010d8 175 Gene3D G3DSA:1.20.120.1760 2 168 4.3E-8 T 14-10-2018 IM40_01235 a832674b57a6889e5d7349bcaa9010d8 175 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 44 66 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IM40_01235 a832674b57a6889e5d7349bcaa9010d8 175 PIRSF PIRSF000847 1 175 3.1E-35 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 IM40_01235 a832674b57a6889e5d7349bcaa9010d8 175 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 66 1.9E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IM40_05095 ab2cb28c55cfc47c6218f4c54c585ea4 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.1E-23 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05095 ab2cb28c55cfc47c6218f4c54c585ea4 137 Gene3D G3DSA:2.60.15.10 1 130 8.8E-33 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05095 ab2cb28c55cfc47c6218f4c54c585ea4 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 18.889 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05095 ab2cb28c55cfc47c6218f4c54c585ea4 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 2.0E-23 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05095 ab2cb28c55cfc47c6218f4c54c585ea4 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 6.2E-32 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_05095 ab2cb28c55cfc47c6218f4c54c585ea4 137 SUPERFAMILY SSF51344 4 84 7.72E-22 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IM40_02060 becc2ec12f4d21f2aed0c7ae20b4c29b 68 Pfam PF00831 Ribosomal L29 protein 6 60 1.9E-17 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02060 becc2ec12f4d21f2aed0c7ae20b4c29b 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 14.991 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02060 becc2ec12f4d21f2aed0c7ae20b4c29b 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 60 9.9E-18 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02060 becc2ec12f4d21f2aed0c7ae20b4c29b 68 SUPERFAMILY SSF46561 2 63 1.06E-16 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02060 becc2ec12f4d21f2aed0c7ae20b4c29b 68 Gene3D G3DSA:1.10.287.310 2 62 4.9E-19 T 14-10-2018 IM40_02060 becc2ec12f4d21f2aed0c7ae20b4c29b 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_00380 5adce4d2f022de166a1852126007ce38 340 Gene3D G3DSA:1.10.600.10 14 340 4.3E-107 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily IM40_00380 5adce4d2f022de166a1852126007ce38 340 SUPERFAMILY SSF48576 17 339 9.54E-92 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily IM40_00380 5adce4d2f022de166a1852126007ce38 340 Pfam PF00348 Polyprenyl synthetase 49 291 7.5E-73 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 IM40_00380 5adce4d2f022de166a1852126007ce38 340 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 219 231 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site IM40_00380 5adce4d2f022de166a1852126007ce38 340 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 97 111 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site IM40_09690 d41ae437dc5b61a44099d45659dba154 363 Pfam PF01609 Transposase DDE domain 99 332 1.9E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IM40_09690 d41ae437dc5b61a44099d45659dba154 363 Pfam PF13808 DDE_Tnp_1-associated 5 88 5.3E-23 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal IM40_06660 8e9743c8062bff5c31c58124f1127cf4 286 SUPERFAMILY SSF103481 188 275 1.44E-12 T 14-10-2018 IM40_06660 8e9743c8062bff5c31c58124f1127cf4 286 SUPERFAMILY SSF103481 27 132 1.29E-14 T 14-10-2018 IM40_06660 8e9743c8062bff5c31c58124f1127cf4 286 Pfam PF00892 EamA-like transporter family 1 130 2.6E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_06660 8e9743c8062bff5c31c58124f1127cf4 286 Pfam PF00892 EamA-like transporter family 143 274 1.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_03150 38e44c3e4e42b673173e9e6642c1a004 280 Pfam PF00793 DAHP synthetase I family 9 270 3.2E-70 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IM40_03150 38e44c3e4e42b673173e9e6642c1a004 280 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 51.613 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IM40_03150 38e44c3e4e42b673173e9e6642c1a004 280 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 273 3.0E-119 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IM40_03150 38e44c3e4e42b673173e9e6642c1a004 280 SUPERFAMILY SSF51569 6 275 1.37E-103 T 14-10-2018 IM40_03150 38e44c3e4e42b673173e9e6642c1a004 280 Gene3D G3DSA:3.20.20.70 3 277 4.1E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 PRINTS PR00955 Flagellar motor switch protein FliM signature 243 261 1.4E-8 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 PRINTS PR00955 Flagellar motor switch protein FliM signature 39 52 1.4E-8 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 PRINTS PR00955 Flagellar motor switch protein FliM signature 144 163 1.4E-8 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 Pfam PF02154 Flagellar motor switch protein FliM 105 261 8.5E-13 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 Gene3D G3DSA:3.40.1550.10 75 265 1.3E-18 T 14-10-2018 IPR028976 CheC-like superfamily IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 283 351 9.0E-13 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) IM40_04305 4f16dd78be01f44b9620d55fada51f37 361 SUPERFAMILY SSF101801 280 351 3.27E-9 T 14-10-2018 IPR036429 SpoA-like superfamily IM40_02655 3ebdbdd6c31dd1d55c734a9d1a4f5fcc 289 Pfam PF13612 Transposase DDE domain 105 257 4.0E-63 T 14-10-2018 IPR025668 Transposase DDE domain IM40_07480 3c2b31c4a2f2a15e449dc10664479ba8 179 SUPERFAMILY SSF48452 5 174 8.72E-61 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07480 3c2b31c4a2f2a15e449dc10664479ba8 179 Gene3D G3DSA:1.20.58.320 1 78 8.7E-25 T 14-10-2018 IM40_07480 3c2b31c4a2f2a15e449dc10664479ba8 179 Gene3D G3DSA:1.25.40.10 79 179 2.2E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07480 3c2b31c4a2f2a15e449dc10664479ba8 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 5.1E-57 T 14-10-2018 IPR010323 Protein of unknown function DUF924 IM40_06570 f685ff4bc8f18243d1f92bbcd47997b6 316 Gene3D G3DSA:3.40.50.1820 1 315 5.8E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_06570 f685ff4bc8f18243d1f92bbcd47997b6 316 SUPERFAMILY SSF53474 32 312 7.23E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_06570 f685ff4bc8f18243d1f92bbcd47997b6 316 Pfam PF07859 alpha/beta hydrolase fold 83 290 1.1E-71 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IM40_01225 d544e640f1456f5d4b1314a5d5b6dbd1 216 SUPERFAMILY SSF52540 14 191 2.33E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01225 d544e640f1456f5d4b1314a5d5b6dbd1 216 Gene3D G3DSA:3.40.50.300 1 147 1.6E-15 T 14-10-2018 IM40_01225 d544e640f1456f5d4b1314a5d5b6dbd1 216 Gene3D G3DSA:1.10.8.60 150 216 1.4E-9 T 14-10-2018 IM40_01225 d544e640f1456f5d4b1314a5d5b6dbd1 216 Pfam PF00308 Bacterial dnaA protein 96 191 4.9E-5 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 Pfam PF00312 Ribosomal protein S15 8 88 1.8E-37 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.4E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.981 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 SUPERFAMILY SSF47060 3 89 2.62E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 Gene3D G3DSA:1.10.287.10 2 89 1.3E-36 T 14-10-2018 IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 SMART SM01387 8 88 5.9E-50 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_03440 5324a8a728cd629b8eb57077196aa5a9 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-27 T 14-10-2018 IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 SUPERFAMILY SSF111304 4 197 8.11E-70 T 14-10-2018 IPR023627 Recombination protein RecR IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 Gene3D G3DSA:1.10.8.420 2 51 1.1E-11 T 14-10-2018 IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 Pfam PF02132 RecR protein 41 76 1.5E-11 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 90.937 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 Gene3D G3DSA:3.40.1360.10 76 197 4.1E-41 T 14-10-2018 IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 TIGRFAM TIGR00615 recR: recombination protein RecR 4 195 7.0E-63 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 Pfam PF13662 Toprim domain 81 170 1.4E-24 T 14-10-2018 IPR006171 TOPRIM domain IM40_04185 ecd72a83cb8e04cde13d1451c8543829 197 SMART SM00493 79 164 2.8E-12 T 14-10-2018 IPR006171 TOPRIM domain IM40_02555 a832fcd204250730798530ee9269673d 224 SUPERFAMILY SSF48613 14 220 3.64E-16 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_02555 a832fcd204250730798530ee9269673d 224 Gene3D G3DSA:1.20.910.10 1 223 1.1E-18 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_02555 a832fcd204250730798530ee9269673d 224 Pfam PF03070 TENA/THI-4/PQQC family 106 219 4.8E-10 T 14-10-2018 IPR004305 Thiaminase-2/PQQC IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 442 35.801 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 439 3.6E-146 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 393 421 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 SUPERFAMILY SSF51161 257 428 6.09E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Gene3D G3DSA:2.160.10.10 235 441 9.8E-56 T 14-10-2018 IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 SUPERFAMILY SSF53448 8 259 8.05E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Gene3D G3DSA:3.90.550.10 2 234 2.6E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 385 419 7.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 307 342 2.6E-5 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 272 302 5.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_04910 7d02f1db43b085a3cb6d8c56dd54bf27 457 Pfam PF12804 MobA-like NTP transferase domain 9 133 8.6E-17 T 14-10-2018 IPR025877 MobA-like NTP transferase IM40_08895 e96372bbb57294d77529008946f8e3eb 268 Gene3D G3DSA:3.40.190.80 150 268 2.9E-31 T 14-10-2018 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 26 48 9.3E-12 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 113 132 9.3E-12 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 207 219 9.3E-12 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 Gene3D G3DSA:3.30.540.10 5 149 2.8E-51 T 14-10-2018 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 SUPERFAMILY SSF56655 12 268 1.28E-74 T 14-10-2018 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 47 67 2.4E-53 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 2.4E-53 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 186 207 2.4E-53 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 2.4E-53 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 69 85 2.4E-53 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 2.4E-53 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 220 234 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 IM40_08895 e96372bbb57294d77529008946f8e3eb 268 Pfam PF00459 Inositol monophosphatase family 18 266 2.4E-56 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 SUPERFAMILY SSF143243 8 186 3.66E-62 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 152 6.4E-48 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 113 134 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 160 33.223 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 152 3.2E-47 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 84 139 3.0E-17 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07270 a2135ceb4028a1bc68c19bce1f6e8fcf 203 Gene3D G3DSA:3.30.460.80 1 132 2.2E-47 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_06440 0c2bf611850cb4a8a33eb271a080198c 233 Gene3D G3DSA:3.90.79.10 46 198 1.1E-6 T 14-10-2018 IM40_06440 0c2bf611850cb4a8a33eb271a080198c 233 SUPERFAMILY SSF55811 46 196 4.21E-6 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 290 321 0.031 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 194 225 1.4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 238 270 360.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 378 409 580.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 153 185 0.025 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 328 359 190.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SMART SM00564 108 139 12.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 Gene3D G3DSA:2.130.10.10 82 438 1.9E-80 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 SUPERFAMILY SSF50998 58 429 4.93E-73 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IM40_04840 3262a4e14d091513be28c1ea1daca3e6 438 Pfam PF13360 PQQ-like domain 121 358 1.4E-53 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IM40_05125 9a75615b8e874751731461425d357c9d 730 SUPERFAMILY SSF55874 565 723 1.17E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_05125 9a75615b8e874751731461425d357c9d 730 SMART SM00387 606 725 2.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_05125 9a75615b8e874751731461425d357c9d 730 SUPERFAMILY SSF47384 465 560 9.22E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IM40_05125 9a75615b8e874751731461425d357c9d 730 Gene3D G3DSA:3.30.450.20 250 288 3.6E-8 T 14-10-2018 IM40_05125 9a75615b8e874751731461425d357c9d 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 702 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_05125 9a75615b8e874751731461425d357c9d 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 722 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_05125 9a75615b8e874751731461425d357c9d 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 681 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_05125 9a75615b8e874751731461425d357c9d 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 667 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IM40_05125 9a75615b8e874751731461425d357c9d 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 724 7.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IM40_05125 9a75615b8e874751731461425d357c9d 730 Pfam PF00512 His Kinase A (phospho-acceptor) domain 472 558 6.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IM40_05125 9a75615b8e874751731461425d357c9d 730 Gene3D G3DSA:1.10.287.130 450 556 6.3E-18 T 14-10-2018 IM40_05125 9a75615b8e874751731461425d357c9d 730 Gene3D G3DSA:3.30.565.10 563 728 1.5E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_05125 9a75615b8e874751731461425d357c9d 730 Gene3D G3DSA:3.30.450.20 210 249 3.6E-8 T 14-10-2018 IM40_05125 9a75615b8e874751731461425d357c9d 730 Pfam PF02743 Cache domain 160 284 1.1E-13 T 14-10-2018 IPR033479 Double Cache domain 1 IM40_09590 01a25c3bad9fa7aea82c68fca825e078 130 Pfam PF06995 Phage P2 GpU 5 129 7.1E-31 T 14-10-2018 IPR009734 Myoviridae, GpU IM40_02450 7795d6bf027d08a771ea09aeb6046f8f 78 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 78 4.2E-24 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 IM40_02450 7795d6bf027d08a771ea09aeb6046f8f 78 SUPERFAMILY SSF55248 5 78 6.54E-25 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 IM40_02450 7795d6bf027d08a771ea09aeb6046f8f 78 Gene3D G3DSA:3.30.1360.20 2 78 9.4E-27 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 IM40_10660 add1894d80d988e388f92245a4dc8ead 126 PIRSF PIRSF033490 3 116 9.1E-28 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 IM40_10660 add1894d80d988e388f92245a4dc8ead 126 SUPERFAMILY SSF50118 6 116 1.81E-23 T 14-10-2018 IM40_10660 add1894d80d988e388f92245a4dc8ead 126 Gene3D G3DSA:2.30.30.110 3 121 2.0E-25 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor IM40_10660 add1894d80d988e388f92245a4dc8ead 126 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 113 1.0E-22 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 SUPERFAMILY SSF51971 372 696 1.18E-18 T 14-10-2018 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 705 2.5E-9 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 394 5.3E-6 T 14-10-2018 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 541 559 5.3E-6 T 14-10-2018 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 SUPERFAMILY SSF63380 791 891 1.8E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 Gene3D G3DSA:2.40.30.10 787 891 1.3E-9 T 14-10-2018 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 Gene3D G3DSA:3.40.50.80 900 1012 1.2E-5 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 Gene3D G3DSA:3.50.50.60 500 559 1.0E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 SUPERFAMILY SSF52343 888 1051 4.95E-7 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 Gene3D G3DSA:3.50.50.60 376 499 1.0E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 537 561 8.1E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_09115 7cafb41be934710ca5c45c846f3fe6ce 1107 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 374 396 8.1E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IM40_03365 5ac2bf308a06e7467e7c22ff98ea6341 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 20 117 6.8E-28 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IM40_03365 5ac2bf308a06e7467e7c22ff98ea6341 133 SUPERFAMILY SSF81301 18 121 2.29E-30 T 14-10-2018 IM40_03365 5ac2bf308a06e7467e7c22ff98ea6341 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 14 118 21.017 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IM40_03365 5ac2bf308a06e7467e7c22ff98ea6341 133 Gene3D G3DSA:3.30.460.10 16 131 5.3E-31 T 14-10-2018 IM40_03365 5ac2bf308a06e7467e7c22ff98ea6341 133 Pfam PF02410 Ribosomal silencing factor during starvation 23 117 2.1E-23 T 14-10-2018 IM40_00160 24ba8dbe69d3019bf4f3efb3223d3e2b 614 Pfam PF14524 Wzt C-terminal domain 465 603 4.9E-15 T 14-10-2018 IPR029439 Wzt, C-terminal IM40_00160 24ba8dbe69d3019bf4f3efb3223d3e2b 614 SUPERFAMILY SSF52540 40 245 1.49E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00160 24ba8dbe69d3019bf4f3efb3223d3e2b 614 SMART SM00382 58 230 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_00160 24ba8dbe69d3019bf4f3efb3223d3e2b 614 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_00160 24ba8dbe69d3019bf4f3efb3223d3e2b 614 Pfam PF00005 ABC transporter 49 180 7.9E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_00160 24ba8dbe69d3019bf4f3efb3223d3e2b 614 Gene3D G3DSA:3.40.50.300 38 279 3.5E-44 T 14-10-2018 IM40_08850 feaddb93ff57624db31202b788dd9d5d 117 Gene3D G3DSA:3.40.630.30 3 95 7.9E-12 T 14-10-2018 IM40_08850 feaddb93ff57624db31202b788dd9d5d 117 Pfam PF00583 Acetyltransferase (GNAT) family 18 88 5.7E-9 T 14-10-2018 IPR000182 GNAT domain IM40_08850 feaddb93ff57624db31202b788dd9d5d 117 SUPERFAMILY SSF55729 18 104 3.21E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase IM40_09365 f62cbe262ca9c50ff17f25d0ac74aa2e 358 Pfam PF06250 Protein of unknown function (DUF1016) 21 338 1.4E-106 T 14-10-2018 IPR009362 Protein of unknown function DUF1016 IM40_10950 d881515dcaf697a44565e558d0385d1a 90 Gene3D G3DSA:3.40.50.300 1 80 2.6E-17 T 14-10-2018 IM40_10950 d881515dcaf697a44565e558d0385d1a 90 Pfam PF01695 IstB-like ATP binding protein 1 63 1.3E-23 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 IM40_00045 db8a58030a57c74a9821bffc2537036e 275 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 65 87 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IM40_00045 db8a58030a57c74a9821bffc2537036e 275 Pfam PF01066 CDP-alcohol phosphatidyltransferase 24 87 4.3E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IM40_00045 db8a58030a57c74a9821bffc2537036e 275 Gene3D G3DSA:1.20.120.1760 11 168 2.0E-14 T 14-10-2018 IM40_00045 db8a58030a57c74a9821bffc2537036e 275 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 214 246 4.1E-9 T 14-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal IM40_08685 0601abcf9580c73de3544d195e46d682 598 SUPERFAMILY SSF90123 24 340 2.22E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_08685 0601abcf9580c73de3544d195e46d682 598 Pfam PF00664 ABC transporter transmembrane region 38 306 1.4E-48 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IM40_08685 0601abcf9580c73de3544d195e46d682 598 Gene3D G3DSA:1.20.1560.10 5 340 1.4E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_08685 0601abcf9580c73de3544d195e46d682 598 Gene3D G3DSA:3.40.50.300 344 598 2.1E-92 T 14-10-2018 IM40_08685 0601abcf9580c73de3544d195e46d682 598 SMART SM00382 379 565 8.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_08685 0601abcf9580c73de3544d195e46d682 598 SUPERFAMILY SSF52540 346 590 1.85E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08685 0601abcf9580c73de3544d195e46d682 598 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_08685 0601abcf9580c73de3544d195e46d682 598 Pfam PF00005 ABC transporter 371 519 6.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 252 3.1E-18 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 259 4.1E-69 T 14-10-2018 IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 SUPERFAMILY SSF56219 1 259 1.27E-71 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 Gene3D G3DSA:3.60.10.10 1 259 4.9E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 259 8.2E-69 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 216 227 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 IM40_07655 9a4e9098320827fa3899b5fd32b832dd 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 IM40_09035 9fff115fa3755d22a2cb9f0a105e28ef 318 Gene3D G3DSA:3.20.20.210 1 318 4.6E-106 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 IM40_09035 9fff115fa3755d22a2cb9f0a105e28ef 318 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 114 130 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IM40_09035 9fff115fa3755d22a2cb9f0a105e28ef 318 SUPERFAMILY SSF51726 1 316 3.14E-82 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 IM40_09035 9fff115fa3755d22a2cb9f0a105e28ef 318 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 1 316 3.4E-104 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IM40_09035 9fff115fa3755d22a2cb9f0a105e28ef 318 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 1 316 4.3E-95 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IM40_03065 1dab020abd48f8263cdbd00180f22535 242 Pfam PF01618 MotA/TolQ/ExbB proton channel family 92 222 1.9E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel IM40_03065 1dab020abd48f8263cdbd00180f22535 242 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 20 241 39.392 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 IM40_03065 1dab020abd48f8263cdbd00180f22535 242 TIGRFAM TIGR02796 tolQ: protein TolQ 22 236 9.3E-86 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 IM40_08665 8a9c8e82053d4120d843703f2f18c3da 303 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 296 3.1E-56 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IM40_07275 9e745f2c59569aea394302ef2f364441 393 SUPERFAMILY SSF56762 19 393 1.31E-142 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07275 9e745f2c59569aea394302ef2f364441 393 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 46 57 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07275 9e745f2c59569aea394302ef2f364441 393 Gene3D G3DSA:1.10.645.20 8 393 1.5E-178 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07275 9e745f2c59569aea394302ef2f364441 393 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 9 393 3.7E-182 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07275 9e745f2c59569aea394302ef2f364441 393 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 123 393 2.6E-126 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07275 9e745f2c59569aea394302ef2f364441 393 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 2 393 49.872 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07550 85aa8736e1490b17a46e7d7fef65275b 459 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 36 360 1.5E-41 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 SUPERFAMILY SSF90123 10 493 3.66E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 SMART SM00382 368 554 2.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 SUPERFAMILY SSF52540 333 578 5.66E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 Pfam PF00005 ABC transporter 360 508 7.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 Gene3D G3DSA:1.20.1560.10 3 331 3.8E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 Gene3D G3DSA:3.40.50.300 333 581 8.0E-85 T 14-10-2018 IM40_04755 d9ad4dbb9ff46a82187dcc42f70ee244 592 Pfam PF00664 ABC transporter transmembrane region 28 290 2.6E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IM40_09335 84eb80fc5d5859e823ea0b3c6e0b0f99 307 Pfam PF04754 Putative transposase, YhgA-like 7 207 4.0E-57 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like IM40_09335 84eb80fc5d5859e823ea0b3c6e0b0f99 307 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 303 1.4E-26 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA IM40_06505 a99ae298edb5df5c8ecb2f9c9371f00c 334 SUPERFAMILY SSF50494 75 270 1.11E-7 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_06505 a99ae298edb5df5c8ecb2f9c9371f00c 334 Gene3D G3DSA:2.40.10.10 192 290 1.0E-5 T 14-10-2018 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 SUPERFAMILY SSF52440 3 122 1.47E-33 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 120 1.9E-32 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 124.838 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 297 4.4E-63 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 SUPERFAMILY SSF56059 124 311 1.32E-49 T 14-10-2018 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 Gene3D G3DSA:3.30.1490.20 137 202 7.5E-101 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 Gene3D G3DSA:3.30.470.20 115 295 7.5E-101 T 14-10-2018 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 310 8.0E-106 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IM40_09165 1b7926deaed3da42a26999ccd2c13371 314 Gene3D G3DSA:3.40.50.20 9 114 7.5E-101 T 14-10-2018 IM40_01480 f201e4f6cd816d7b99b07c7c59c25d38 430 SUPERFAMILY SSF103473 9 417 1.7E-60 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_01480 f201e4f6cd816d7b99b07c7c59c25d38 430 Pfam PF07690 Major Facilitator Superfamily 34 364 1.4E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_01480 f201e4f6cd816d7b99b07c7c59c25d38 430 Gene3D G3DSA:1.20.1250.20 7 421 3.8E-56 T 14-10-2018 IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 Gene3D G3DSA:3.30.160.390 9 97 5.6E-8 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 Pfam PF13356 Arm DNA-binding domain 11 99 1.1E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 SUPERFAMILY SSF56349 104 378 4.41E-65 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 Gene3D G3DSA:1.10.443.10 205 388 2.5E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 Pfam PF00589 Phage integrase family 208 372 6.1E-32 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 Gene3D G3DSA:1.10.150.130 98 204 2.5E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal IM40_08105 8a440e48c30e6faca354ee2756cb762a 394 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 105 161 4.0E-6 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 IM40_03225 818e89207ad2a5f462bb36b9de5f45b3 282 Pfam PF00753 Metallo-beta-lactamase superfamily 164 196 2.4E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase IM40_11280 f262766ee13028e364251cbc27cda010 362 SUPERFAMILY SSF55469 148 345 4.82E-12 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_11280 f262766ee13028e364251cbc27cda010 362 Gene3D G3DSA:3.40.109.10 101 343 4.3E-44 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_11280 f262766ee13028e364251cbc27cda010 362 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 170 341 5.0E-29 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain IM40_11280 f262766ee13028e364251cbc27cda010 362 Pfam PF00881 Nitroreductase family 152 329 1.9E-7 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IM40_05055 f02618044bf2bbdbfc463267aed590c2 269 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 263 1.2E-67 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IM40_05055 f02618044bf2bbdbfc463267aed590c2 269 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IM40_05055 f02618044bf2bbdbfc463267aed590c2 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 257 3.2E-71 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IM40_05055 f02618044bf2bbdbfc463267aed590c2 269 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 263 18.559 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 Pfam PF00571 CBS domain 120 168 6.1E-6 T 14-10-2018 IPR000644 CBS domain IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 Pfam PF00571 CBS domain 51 104 1.6E-4 T 14-10-2018 IPR000644 CBS domain IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 SUPERFAMILY SSF56176 185 265 7.36E-16 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 Gene3D G3DSA:3.10.580.10 29 178 8.1E-44 T 14-10-2018 IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 SUPERFAMILY SSF54631 45 178 7.83E-29 T 14-10-2018 IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 SMART SM00116 120 168 5.9 T 14-10-2018 IPR000644 CBS domain IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 SMART SM00116 59 108 3.0 T 14-10-2018 IPR000644 CBS domain IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 Gene3D G3DSA:3.30.465.10 179 268 3.8E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 SMART SM01091 184 267 2.1E-20 T 14-10-2018 IPR005170 Transporter-associated domain IM40_04785 b83a279a4bb5a75cd1749ea42f577da8 268 Pfam PF03471 Transporter associated domain 185 265 6.7E-16 T 14-10-2018 IPR005170 Transporter-associated domain IM40_08210 86e108916dcbe96cb835205233804d23 360 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 67 83 7.3E-14 T 14-10-2018 IM40_08210 86e108916dcbe96cb835205233804d23 360 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 179 203 7.3E-14 T 14-10-2018 IM40_08210 86e108916dcbe96cb835205233804d23 360 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 93 107 7.3E-14 T 14-10-2018 IM40_08210 86e108916dcbe96cb835205233804d23 360 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 153 165 7.3E-14 T 14-10-2018 IM40_08210 86e108916dcbe96cb835205233804d23 360 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 156 162 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IM40_08210 86e108916dcbe96cb835205233804d23 360 Gene3D G3DSA:3.40.50.150 69 275 5.8E-28 T 14-10-2018 IM40_08210 86e108916dcbe96cb835205233804d23 360 Pfam PF07669 Eco57I restriction-modification methylase 152 252 3.9E-9 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 IM40_08210 86e108916dcbe96cb835205233804d23 360 SUPERFAMILY SSF53335 38 266 6.58E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Gene3D G3DSA:3.90.199.10 37 515 4.0E-217 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 SMART SM00434 15 493 1.0E-267 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 9 890 23.793 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 888 0.0 T 14-10-2018 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Gene3D G3DSA:3.30.1360.40 240 336 4.0E-217 T 14-10-2018 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 SUPERFAMILY SSF56719 34 515 9.42E-175 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 499 4.0E-150 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Gene3D G3DSA:1.10.268.10 373 487 4.0E-217 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.8E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 584 631 8.5E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 532 578 2.0E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 643 685 2.1E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 842 888 1.6E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 689 736 1.3E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IM40_02940 77b284a02f764b198d64f6c30b926eb9 917 SUPERFAMILY SSF101904 527 901 6.8E-98 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IM40_08155 b7fda284f8e9f72d28e94324ee730823 223 SUPERFAMILY SSF143081 2 222 2.35E-71 T 14-10-2018 IPR036590 SOS response associated peptidase-like IM40_08155 b7fda284f8e9f72d28e94324ee730823 223 Gene3D G3DSA:3.90.1680.10 1 223 2.2E-71 T 14-10-2018 IPR036590 SOS response associated peptidase-like IM40_08155 b7fda284f8e9f72d28e94324ee730823 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 2.2E-67 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 SMART SM00062 36 256 4.8E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 255 2.1E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 SMART SM00079 36 256 1.1E-5 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 Gene3D G3DSA:3.40.190.10 125 216 2.8E-60 T 14-10-2018 IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 Gene3D G3DSA:3.40.190.10 37 248 2.8E-60 T 14-10-2018 IM40_04925 8b36033a21bfc9856f7b5bd6520c4d56 256 SUPERFAMILY SSF53850 8 255 1.92E-62 T 14-10-2018 IM40_05230 36990f3ecad1b1e0938670fe2947aa02 260 Gene3D G3DSA:3.60.15.10 2 260 8.0E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_05230 36990f3ecad1b1e0938670fe2947aa02 260 Pfam PF12706 Beta-lactamase superfamily domain 53 232 3.7E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase IM40_05230 36990f3ecad1b1e0938670fe2947aa02 260 SUPERFAMILY SSF56281 5 260 2.49E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_05230 36990f3ecad1b1e0938670fe2947aa02 260 SMART SM00849 41 231 7.8E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase IM40_08330 753ff0f9c02e4b278668795f24f48048 82 SUPERFAMILY SSF89447 6 53 1.96E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily IM40_08330 753ff0f9c02e4b278668795f24f48048 82 Gene3D G3DSA:2.10.260.10 4 43 1.6E-9 T 14-10-2018 IM40_08330 753ff0f9c02e4b278668795f24f48048 82 SMART SM00966 5 50 6.0E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_08330 753ff0f9c02e4b278668795f24f48048 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 13 46 2.0E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_08330 753ff0f9c02e4b278668795f24f48048 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 42 6.4E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_00700 dac86a17d07cb14153b89a717511c8e2 494 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 481 3.9E-178 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IM40_00700 dac86a17d07cb14153b89a717511c8e2 494 Pfam PF01425 Amidase 25 471 1.3E-146 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IM40_00700 dac86a17d07cb14153b89a717511c8e2 494 Gene3D G3DSA:3.90.1300.10 3 489 4.6E-186 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IM40_00700 dac86a17d07cb14153b89a717511c8e2 494 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 482 92.77 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IM40_00700 dac86a17d07cb14153b89a717511c8e2 494 SUPERFAMILY SSF75304 2 480 8.24E-156 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 SUPERFAMILY SSF53649 7 509 1.12E-71 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 Gene3D G3DSA:3.40.720.10 7 507 3.4E-205 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 510 46.743 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 294 8.1E-66 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 Pfam PF01676 Metalloenzyme superfamily 7 498 1.6E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 7 509 1.2E-203 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 Gene3D G3DSA:3.40.1450.10 79 309 3.4E-205 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 PIRSF PIRSF001492 1 512 2.0E-199 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_03405 d152bca821eb39f09287489d881d0e2f 512 SUPERFAMILY SSF64158 79 300 2.48E-74 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IM40_03540 f0362ffba39cac275d9b367316851e73 416 Pfam PF07690 Major Facilitator Superfamily 60 355 2.2E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_03540 f0362ffba39cac275d9b367316851e73 416 SUPERFAMILY SSF103473 13 411 4.05E-37 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_03540 f0362ffba39cac275d9b367316851e73 416 Gene3D G3DSA:1.20.1250.20 13 415 3.9E-33 T 14-10-2018 IM40_01390 17f5528961a0e349c9c695969185e12b 199 Gene3D G3DSA:2.10.109.10 85 199 6.4E-44 T 14-10-2018 IM40_01390 17f5528961a0e349c9c695969185e12b 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 112 122 3.0E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 IM40_01390 17f5528961a0e349c9c695969185e12b 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 151 163 3.0E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 IM40_01390 17f5528961a0e349c9c695969185e12b 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 134 3.0E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 IM40_01390 17f5528961a0e349c9c695969185e12b 199 Pfam PF00717 Peptidase S24-like 115 182 1.9E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_01390 17f5528961a0e349c9c695969185e12b 199 SUPERFAMILY SSF51306 79 197 1.92E-34 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_01625 30650bce488b0aaf5e73f425fb8bb839 161 TIGRFAM TIGR00576 dut: dUTP diphosphatase 19 157 1.0E-49 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 IM40_01625 30650bce488b0aaf5e73f425fb8bb839 161 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 12 158 32.492 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 IM40_01625 30650bce488b0aaf5e73f425fb8bb839 161 Gene3D G3DSA:2.70.40.10 8 158 4.0E-52 T 14-10-2018 IPR036157 dUTPase-like superfamily IM40_01625 30650bce488b0aaf5e73f425fb8bb839 161 SUPERFAMILY SSF51283 16 158 2.62E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily IM40_01625 30650bce488b0aaf5e73f425fb8bb839 161 Pfam PF00692 dUTPase 26 157 3.5E-30 T 14-10-2018 IPR029054 dUTPase-like IM40_10855 62b771736b1633876537656e88e4eb6c 91 SUPERFAMILY SSF56024 9 67 4.71E-13 T 14-10-2018 IM40_10855 62b771736b1633876537656e88e4eb6c 91 Gene3D G3DSA:3.30.870.10 1 83 6.9E-17 T 14-10-2018 IM40_10855 62b771736b1633876537656e88e4eb6c 91 Pfam PF13091 PLD-like domain 9 52 3.1E-12 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 IM40_05495 ca7985511f33ade65f2f08ca111279ce 222 SUPERFAMILY SSF47616 70 209 2.13E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IM40_05495 ca7985511f33ade65f2f08ca111279ce 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 5.7E-24 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IM40_05495 ca7985511f33ade65f2f08ca111279ce 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 138 198 3.8E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal IM40_05495 ca7985511f33ade65f2f08ca111279ce 222 Gene3D G3DSA:1.20.1050.10 79 197 1.6E-85 T 14-10-2018 IM40_05495 ca7985511f33ade65f2f08ca111279ce 222 SUPERFAMILY SSF52833 1 102 3.56E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_05495 ca7985511f33ade65f2f08ca111279ce 222 Gene3D G3DSA:3.40.30.10 4 222 1.6E-85 T 14-10-2018 IM40_07425 8694beaf39d5a6a72c82c59ff5e509e9 193 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 6 86 2.6E-27 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal IM40_07425 8694beaf39d5a6a72c82c59ff5e509e9 193 Pfam PF01478 Type IV leader peptidase family 101 192 3.2E-8 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 IM40_05360 8f0641758984bd246040922dfae3bb97 326 SUPERFAMILY SSF52518 7 325 2.2E-105 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold IM40_05360 8f0641758984bd246040922dfae3bb97 326 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 10 323 4.1E-150 T 14-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 IM40_05360 8f0641758984bd246040922dfae3bb97 326 Gene3D G3DSA:3.40.50.970 2 326 6.5E-129 T 14-10-2018 IM40_05360 8f0641758984bd246040922dfae3bb97 326 Pfam PF00676 Dehydrogenase E1 component 18 315 2.2E-98 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 IM40_05965 fd61831ce85fb8904698ad4a8b8bbc65 148 Pfam PF00072 Response regulator receiver domain 12 126 1.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_05965 fd61831ce85fb8904698ad4a8b8bbc65 148 SMART SM00448 9 131 1.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_05965 fd61831ce85fb8904698ad4a8b8bbc65 148 SUPERFAMILY SSF52172 8 138 9.96E-28 T 14-10-2018 IPR011006 CheY-like superfamily IM40_05965 fd61831ce85fb8904698ad4a8b8bbc65 148 Gene3D G3DSA:3.40.50.2300 2 147 4.6E-29 T 14-10-2018 IM40_03120 6d383c325ca3ea5932ce3ec58eb91854 314 Gene3D G3DSA:3.40.50.2300 32 285 6.6E-77 T 14-10-2018 IM40_03120 6d383c325ca3ea5932ce3ec58eb91854 314 Gene3D G3DSA:3.40.50.2300 136 304 6.6E-77 T 14-10-2018 IM40_03120 6d383c325ca3ea5932ce3ec58eb91854 314 SUPERFAMILY SSF53822 27 284 2.25E-19 T 14-10-2018 IPR028082 Periplasmic binding protein-like I IM40_03120 6d383c325ca3ea5932ce3ec58eb91854 314 Pfam PF04392 ABC transporter substrate binding protein 21 304 7.1E-79 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein IM40_08985 8ecaa085a2831882e1b960c67cd321b8 531 Pfam PF08019 Domain of unknown function (DUF1705) 53 202 2.4E-44 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 IM40_08985 8ecaa085a2831882e1b960c67cd321b8 531 Pfam PF00884 Sulfatase 232 515 4.7E-47 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 IM40_08985 8ecaa085a2831882e1b960c67cd321b8 531 SUPERFAMILY SSF53649 238 479 1.57E-14 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 IM40_08985 8ecaa085a2831882e1b960c67cd321b8 531 Gene3D G3DSA:3.40.720.10 217 531 9.3E-84 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Gene3D G3DSA:1.10.150.20 561 619 1.4E-19 T 14-10-2018 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Gene3D G3DSA:3.40.1440.10 16 113 1.8E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Hamap MF_00203 UvrABC system protein C [uvrC]. 15 618 26.777 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 SUPERFAMILY SSF47781 532 620 6.99E-22 T 14-10-2018 IPR010994 RuvA domain 2-like IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 SUPERFAMILY SSF82771 28 110 1.7E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 392 553 3.1E-47 T 14-10-2018 IPR001162 UvrC family homology region IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Pfam PF01541 GIY-YIG catalytic domain 30 104 4.0E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Pfam PF12826 Helix-hairpin-helix motif 573 620 3.6E-7 T 14-10-2018 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 SMART SM00465 28 109 1.7E-20 T 14-10-2018 IPR000305 GIY-YIG endonuclease IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Gene3D G3DSA:3.30.420.340 384 560 2.0E-50 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 Pfam PF02151 UvrB/uvrC motif 217 246 2.0E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 22 599 2.6E-168 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 IM40_03610 f8427a2a5b3118b67eadb4395b8581d7 620 SUPERFAMILY SSF46600 200 253 5.75E-13 T 14-10-2018 IPR036876 UVR domain superfamily IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 7.3E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 SMART SM00411 1 89 1.4E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 Gene3D G3DSA:4.10.520.10 1 90 8.9E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 SUPERFAMILY SSF47729 1 89 6.33E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 4.3E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 4.3E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_09980 51c8d0d16d3f2eedf6361b1cdcb20690 90 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 4.3E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_02970 9a9b1592fdecca515b4af55b4baaca7c 388 Pfam PF04860 Phage portal protein 47 376 7.5E-85 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein IM40_02970 9a9b1592fdecca515b4af55b4baaca7c 388 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 38 383 4.2E-75 T 14-10-2018 IPR006427 Phage portal protein, HK97 IM40_01850 329bf0d3e792c7c8c713eb4bb8e14a0a 261 SUPERFAMILY SSF52540 19 260 8.7E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01850 329bf0d3e792c7c8c713eb4bb8e14a0a 261 Pfam PF13614 AAA domain 23 177 5.5E-17 T 14-10-2018 IPR025669 AAA domain IM40_01850 329bf0d3e792c7c8c713eb4bb8e14a0a 261 PIRSF PIRSF003092 5 261 1.5E-56 T 14-10-2018 IPR025501 ATP binding protein MinD IM40_01850 329bf0d3e792c7c8c713eb4bb8e14a0a 261 Gene3D G3DSA:3.40.50.300 20 259 3.5E-45 T 14-10-2018 IM40_10820 5e5b89d7117c7a02cab45a5ed36e3108 268 SUPERFAMILY SSF52540 68 215 9.52E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10820 5e5b89d7117c7a02cab45a5ed36e3108 268 Gene3D G3DSA:3.40.50.300 63 250 1.1E-41 T 14-10-2018 IM40_10820 5e5b89d7117c7a02cab45a5ed36e3108 268 Pfam PF01695 IstB-like ATP binding protein 60 233 4.0E-58 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 IM40_10820 5e5b89d7117c7a02cab45a5ed36e3108 268 SMART SM00382 100 234 6.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_10820 5e5b89d7117c7a02cab45a5ed36e3108 268 PIRSF PIRSF003073 1 255 1.4E-77 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 Gene3D G3DSA:3.40.50.300 69 276 6.0E-41 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 Gene3D G3DSA:3.30.230.10 330 452 4.3E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 SUPERFAMILY SSF54211 252 433 1.63E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 SMART SM00382 87 241 7.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 SUPERFAMILY SSF52540 66 287 8.66E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 Pfam PF13541 Subunit ChlI of Mg-chelatase 338 425 1.3E-8 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 443 1.8E-176 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 Hamap MF_01498 DNA repair protein RadA [radA]. 21 451 42.538 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 Pfam PF13481 AAA domain 82 220 7.4E-14 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 120 137 3.3E-88 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 245 271 3.3E-88 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 10 34 3.3E-88 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 319 342 3.3E-88 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 171 195 3.3E-88 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 79 107 3.3E-88 T 14-10-2018 IM40_04655 eea1065c5e128e8ce7da7e2813878f4d 452 PRINTS PR01874 DNA repair protein radA signature 210 238 3.3E-88 T 14-10-2018 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 SUPERFAMILY SSF53067 124 259 3.82E-35 T 14-10-2018 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 260 32.242 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 Gene3D G3DSA:3.30.420.40 91 260 2.4E-51 T 14-10-2018 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 Pfam PF03309 Type III pantothenate kinase 2 206 1.0E-59 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 Gene3D G3DSA:3.30.420.40 1 88 4.4E-28 T 14-10-2018 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 SUPERFAMILY SSF53067 1 123 2.33E-27 T 14-10-2018 IM40_05285 2f1b2d28a99dc5efe1df5f8699e7c668 260 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 255 8.8E-62 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 IM40_10080 a9eaee09cf4fe1b5a54f91a478a3941d 318 Pfam PF03524 Conjugal transfer protein 97 310 1.1E-36 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX IM40_10080 a9eaee09cf4fe1b5a54f91a478a3941d 318 Gene3D G3DSA:2.60.40.2500 214 318 1.5E-12 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily IM40_08965 12d6f78046f130bb77080fc301455e5a 170 Pfam PF12100 Domain of unknown function (DUF3576) 66 165 3.3E-43 T 14-10-2018 IPR021959 Protein of unknown function DUF3576 IM40_05850 46a7519598465a87472e84c5e34bd6dd 78 SUPERFAMILY SSF52172 9 78 1.32E-20 T 14-10-2018 IPR011006 CheY-like superfamily IM40_05850 46a7519598465a87472e84c5e34bd6dd 78 Pfam PF00072 Response regulator receiver domain 9 78 2.0E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_05850 46a7519598465a87472e84c5e34bd6dd 78 Gene3D G3DSA:3.40.50.12740 6 78 4.9E-24 T 14-10-2018 IM40_10800 44c7333036991a56a5f62038925489db 438 Gene3D G3DSA:2.40.10.10 142 343 1.3E-38 T 14-10-2018 IM40_10800 44c7333036991a56a5f62038925489db 438 SUPERFAMILY SSF50494 142 363 8.22E-22 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_10800 44c7333036991a56a5f62038925489db 438 Gene3D G3DSA:2.40.10.10 156 270 1.3E-38 T 14-10-2018 IM40_10800 44c7333036991a56a5f62038925489db 438 Pfam PF13365 Trypsin-like peptidase domain 181 326 1.8E-6 T 14-10-2018 IM40_00095 784b1b8a18d64ba13031f129e3a72b05 364 Gene3D G3DSA:3.40.50.2000 179 345 5.4E-21 T 14-10-2018 IM40_00095 784b1b8a18d64ba13031f129e3a72b05 364 Pfam PF00534 Glycosyl transferases group 1 185 332 9.3E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 IM40_00095 784b1b8a18d64ba13031f129e3a72b05 364 Gene3D G3DSA:3.40.50.2000 22 178 1.3E-15 T 14-10-2018 IM40_00095 784b1b8a18d64ba13031f129e3a72b05 364 Pfam PF13439 Glycosyltransferase Family 4 26 172 1.8E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IM40_00095 784b1b8a18d64ba13031f129e3a72b05 364 SUPERFAMILY SSF53756 26 361 3.77E-40 T 14-10-2018 IM40_00815 8685e93d5701fa3558b19746063c2905 155 Pfam PF01047 MarR family 39 100 2.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_00815 8685e93d5701fa3558b19746063c2905 155 SUPERFAMILY SSF46785 14 150 8.19E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_00815 8685e93d5701fa3558b19746063c2905 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 7.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_00815 8685e93d5701fa3558b19746063c2905 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 7.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_00815 8685e93d5701fa3558b19746063c2905 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 7.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_00815 8685e93d5701fa3558b19746063c2905 155 SMART SM00347 32 136 1.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IM40_00815 8685e93d5701fa3558b19746063c2905 155 Gene3D G3DSA:1.10.10.10 7 150 6.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08315 ec017c2840dd3ced2d2b78d95add11ad 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 11 47 1.6E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 IM40_08315 ec017c2840dd3ced2d2b78d95add11ad 95 SUPERFAMILY SSF47598 9 49 5.48E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_10535 56cb71e6fe8dcf8f175b51a23e6ca9a5 230 Gene3D G3DSA:1.20.910.10 9 226 3.8E-8 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_10535 56cb71e6fe8dcf8f175b51a23e6ca9a5 230 SUPERFAMILY SSF48613 15 188 9.85E-13 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_02180 30a2318054d81a85201a7093b7433e3e 307 SUPERFAMILY SSF53850 89 294 3.88E-28 T 14-10-2018 IM40_02180 30a2318054d81a85201a7093b7433e3e 307 Gene3D G3DSA:1.10.10.10 2 92 6.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_02180 30a2318054d81a85201a7093b7433e3e 307 SUPERFAMILY SSF46785 2 87 4.67E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_02180 30a2318054d81a85201a7093b7433e3e 307 Pfam PF03466 LysR substrate binding domain 88 290 3.6E-21 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_02180 30a2318054d81a85201a7093b7433e3e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_02180 30a2318054d81a85201a7093b7433e3e 307 Gene3D G3DSA:3.40.190.290 93 292 7.4E-36 T 14-10-2018 IM40_02335 ba5375f4d05781f63fb6d4d5f8903666 97 Pfam PF07178 TraL protein 11 96 8.9E-24 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 IM40_02335 ba5375f4d05781f63fb6d4d5f8903666 97 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 10 96 8.8E-17 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 SMART SM00267 159 323 0.0033 T 14-10-2018 IPR000160 GGDEF domain IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 SUPERFAMILY SSF55073 176 315 7.38E-9 T 14-10-2018 IPR029787 Nucleotide cyclase IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 Gene3D G3DSA:3.20.20.450 325 581 1.8E-87 T 14-10-2018 IPR035919 EAL domain superfamily IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 Pfam PF00563 EAL domain 342 575 2.2E-72 T 14-10-2018 IPR001633 EAL domain IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 172 315 1.0E-8 T 14-10-2018 IPR000160 GGDEF domain IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 Gene3D G3DSA:3.30.70.270 171 324 1.6E-12 T 14-10-2018 IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 SMART SM00052 335 580 2.2E-95 T 14-10-2018 IPR001633 EAL domain IM40_00575 bbf31949bde684ccce821e9c216c89e6 589 SUPERFAMILY SSF141868 341 587 3.92E-81 T 14-10-2018 IPR035919 EAL domain superfamily IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 Gene3D G3DSA:3.30.190.20 21 225 4.8E-82 T 14-10-2018 IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 PIRSF PIRSF002155 1 227 1.9E-80 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 Gene3D G3DSA:3.40.50.790 68 159 4.8E-82 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.457 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 3.5E-54 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.0E-100 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 SUPERFAMILY SSF56808 6 226 8.5E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like IM40_06230 0deea251cc5db5f45f8648a11ace89f3 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_00255 3fe6d3382371fe689fd6fd48494ac68c 554 SUPERFAMILY SSF52540 164 549 7.32E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_00255 3fe6d3382371fe689fd6fd48494ac68c 554 Gene3D G3DSA:3.30.450.90 147 277 2.0E-40 T 14-10-2018 IM40_00255 3fe6d3382371fe689fd6fd48494ac68c 554 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 147 5.0E-16 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal IM40_00255 3fe6d3382371fe689fd6fd48494ac68c 554 Pfam PF00437 Type II/IV secretion system protein 180 444 6.8E-73 T 14-10-2018 IPR001482 Type II/IV secretion system protein IM40_00255 3fe6d3382371fe689fd6fd48494ac68c 554 SUPERFAMILY SSF160246 5 145 2.43E-25 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily IM40_00255 3fe6d3382371fe689fd6fd48494ac68c 554 Gene3D G3DSA:3.40.50.300 279 553 2.1E-97 T 14-10-2018 IM40_01015 f37b8ed415cf9f5fda574bf125affb14 278 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 7.0E-25 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 IM40_01015 f37b8ed415cf9f5fda574bf125affb14 278 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 1.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_01015 f37b8ed415cf9f5fda574bf125affb14 278 SUPERFAMILY SSF51161 2 242 1.94E-64 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily IM40_01015 f37b8ed415cf9f5fda574bf125affb14 278 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 210 1.3E-10 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_01015 f37b8ed415cf9f5fda574bf125affb14 278 Gene3D G3DSA:2.160.10.10 87 262 5.3E-54 T 14-10-2018 IM40_01015 f37b8ed415cf9f5fda574bf125affb14 278 Gene3D G3DSA:1.10.166.10 1 70 1.7E-26 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 IM40_07185 7fd4dbf39696fb07065e1c9ddb384efa 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 288 1.3E-13 T 14-10-2018 IPR000160 GGDEF domain IM40_07185 7fd4dbf39696fb07065e1c9ddb384efa 323 Gene3D G3DSA:3.30.70.270 130 295 1.0E-20 T 14-10-2018 IM40_07185 7fd4dbf39696fb07065e1c9ddb384efa 323 SMART SM00267 121 294 1.2E-7 T 14-10-2018 IPR000160 GGDEF domain IM40_07185 7fd4dbf39696fb07065e1c9ddb384efa 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 286 1.9E-17 T 14-10-2018 IPR000160 GGDEF domain IM40_07185 7fd4dbf39696fb07065e1c9ddb384efa 323 SUPERFAMILY SSF55073 138 287 6.43E-19 T 14-10-2018 IPR029787 Nucleotide cyclase IM40_03465 f9295d0da406dd2d6359aecc0b1279dd 470 SUPERFAMILY SSF53300 131 463 1.52E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily IM40_03465 f9295d0da406dd2d6359aecc0b1279dd 470 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 64 1.8E-9 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal IM40_10150 0a0c9015a131cc75ed0ee148481231db 111 Pfam PF06412 Conjugal transfer protein TraD 26 89 1.4E-9 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 IM40_01860 5ddd41e87d4afec94c43bcb5ef8c998a 354 SUPERFAMILY SSF55469 140 343 3.05E-23 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_01860 5ddd41e87d4afec94c43bcb5ef8c998a 354 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 161 332 4.3E-37 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain IM40_01860 5ddd41e87d4afec94c43bcb5ef8c998a 354 Gene3D G3DSA:3.40.109.10 94 336 9.2E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IM40_01860 5ddd41e87d4afec94c43bcb5ef8c998a 354 Pfam PF00881 Nitroreductase family 146 336 2.1E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IM40_09370 39224406dbd0063ea724991120f80df8 971 Pfam PF13700 Domain of unknown function (DUF4158) 8 142 5.7E-12 T 14-10-2018 IPR025296 Domain of unknown function DUF4158 IM40_09370 39224406dbd0063ea724991120f80df8 971 Pfam PF01526 Tn3 transposase DDE domain 563 952 3.6E-125 T 14-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 IM40_11115 ac17fa739c6e448619ec534d7bff70c9 406 Pfam PF01548 Transposase 14 170 4.0E-18 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_11115 ac17fa739c6e448619ec534d7bff70c9 406 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 364 2.6E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_08520 4deb90cdb33bb2b4503f49147811229d 158 Pfam PF04352 ProQ/FINO family 11 55 1.3E-4 T 14-10-2018 IPR016103 ProQ/FinO domain IM40_04850 9aaac79d5379208440ba427de60e84b9 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IM40_04850 9aaac79d5379208440ba427de60e84b9 236 Pfam PF00106 short chain dehydrogenase 7 197 1.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 9aaac79d5379208440ba427de60e84b9 236 Gene3D G3DSA:3.40.50.720 2 235 1.5E-63 T 14-10-2018 IM40_04850 9aaac79d5379208440ba427de60e84b9 236 SUPERFAMILY SSF51735 3 231 1.72E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_04850 9aaac79d5379208440ba427de60e84b9 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 9aaac79d5379208440ba427de60e84b9 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 9aaac79d5379208440ba427de60e84b9 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 9aaac79d5379208440ba427de60e84b9 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 9aaac79d5379208440ba427de60e84b9 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_04850 9aaac79d5379208440ba427de60e84b9 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 5.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 79 1.6E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 Pfam PF03466 LysR substrate binding domain 107 262 8.1E-13 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 4.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 4.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 4.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 Gene3D G3DSA:3.40.190.290 110 316 1.3E-26 T 14-10-2018 IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 SUPERFAMILY SSF53850 108 316 1.99E-17 T 14-10-2018 IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 Gene3D G3DSA:1.10.10.10 19 100 4.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_05905 d54d073c0630b57b32ab6d933e4a222e 320 SUPERFAMILY SSF46785 17 127 8.36E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_04360 41758413a744e5687d2f50fbb019b8c7 276 Gene3D G3DSA:3.40.50.300 7 271 1.5E-55 T 14-10-2018 IM40_04360 41758413a744e5687d2f50fbb019b8c7 276 SUPERFAMILY SSF52540 1 238 9.65E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_04360 41758413a744e5687d2f50fbb019b8c7 276 Pfam PF09140 ATPase MipZ 8 266 4.1E-101 T 14-10-2018 IPR015223 ATPase MipZ IM40_07060 509967b11300b3851a2950295bdcb84a 161 Gene3D G3DSA:3.30.420.10 4 156 5.8E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_07060 509967b11300b3851a2950295bdcb84a 161 Hamap MF_00042 Ribonuclease H [rnhA]. 8 157 33.424 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 IM40_07060 509967b11300b3851a2950295bdcb84a 161 Pfam PF00075 RNase H 9 148 9.4E-46 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 IM40_07060 509967b11300b3851a2950295bdcb84a 161 SUPERFAMILY SSF53098 9 148 6.96E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 SUPERFAMILY SSF54919 2 139 7.59E-54 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-35 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-35 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-35 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-35 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-35 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 SMART SM00562 3 140 3.5E-76 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 Pfam PF00334 Nucleoside diphosphate kinase 5 138 2.6E-52 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 Gene3D G3DSA:3.30.70.141 1 139 6.8E-53 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_01245 5b204dde77324eee470ae08949c8ef5b 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.487 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IM40_02400 ca7f3e0a4b03354a8426508f74ada307 293 Pfam PF13621 Cupin-like domain 21 247 9.4E-35 T 14-10-2018 IM40_02400 ca7f3e0a4b03354a8426508f74ada307 293 SMART SM00558 105 258 1.6E-4 T 14-10-2018 IPR003347 JmjC domain IM40_02400 ca7f3e0a4b03354a8426508f74ada307 293 Gene3D G3DSA:2.60.120.1660 4 249 1.3E-47 T 14-10-2018 IM40_02400 ca7f3e0a4b03354a8426508f74ada307 293 SUPERFAMILY SSF51197 7 254 1.21E-43 T 14-10-2018 IM40_03680 f2519773b0aba8b89d201d5a89f27cbf 274 SUPERFAMILY SSF48452 36 229 1.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_03680 f2519773b0aba8b89d201d5a89f27cbf 274 Pfam PF13525 Outer membrane lipoprotein 36 227 8.2E-56 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like IM40_03680 f2519773b0aba8b89d201d5a89f27cbf 274 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 237 34.259 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD IM40_03680 f2519773b0aba8b89d201d5a89f27cbf 274 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 11 243 8.7E-84 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD IM40_03680 f2519773b0aba8b89d201d5a89f27cbf 274 Gene3D G3DSA:1.25.40.10 36 249 9.6E-58 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 SMART SM00478 39 186 3.6E-58 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 188 204 1.8E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 TIGRFAM TIGR01083 nth: endonuclease III 7 195 3.9E-83 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 169 6.1E-24 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 SMART SM00525 187 207 0.0029 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 PIRSF PIRSF001435 3 212 1.8E-55 T 14-10-2018 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 Gene3D G3DSA:1.10.340.30 22 133 2.9E-77 T 14-10-2018 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 Pfam PF00633 Helix-hairpin-helix motif 100 128 9.3E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 SUPERFAMILY SSF48150 6 208 7.69E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 Hamap MF_00942 Endonuclease III [nth]. 1 210 37.55 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 Gene3D G3DSA:1.10.1670.10 13 204 2.9E-77 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 IM40_06620 789684da1de12be47a3a5bc5b4b8bf6e 216 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 188 204 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IM40_10645 853c3a441360fddcbe2c11dd9ed6fa6f 465 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 226 231 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 IM40_10645 853c3a441360fddcbe2c11dd9ed6fa6f 465 Pfam PF00089 Trypsin 212 322 2.1E-4 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 IM40_10645 853c3a441360fddcbe2c11dd9ed6fa6f 465 SUPERFAMILY SSF50494 179 426 3.35E-17 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_10645 853c3a441360fddcbe2c11dd9ed6fa6f 465 Gene3D G3DSA:2.40.10.10 183 423 2.2E-28 T 14-10-2018 IM40_10645 853c3a441360fddcbe2c11dd9ed6fa6f 465 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 392 402 - T 14-10-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 IM40_10645 853c3a441360fddcbe2c11dd9ed6fa6f 465 Gene3D G3DSA:2.40.10.10 196 311 2.2E-28 T 14-10-2018 IM40_05570 4af016b9503068c74bc9757a01eea71a 347 Pfam PF00814 Glycoprotease family 23 316 1.1E-95 T 14-10-2018 IPR000905 Gcp-like domain IM40_05570 4af016b9503068c74bc9757a01eea71a 347 SUPERFAMILY SSF53067 1 320 8.1E-40 T 14-10-2018 IM40_05570 4af016b9503068c74bc9757a01eea71a 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 315 4.7E-100 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 Gene3D G3DSA:3.30.420.40 128 302 3.1E-119 T 14-10-2018 IM40_05570 4af016b9503068c74bc9757a01eea71a 347 Gene3D G3DSA:3.30.420.40 3 323 3.1E-119 T 14-10-2018 IM40_05570 4af016b9503068c74bc9757a01eea71a 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 323 5.8E-124 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 IM40_05570 4af016b9503068c74bc9757a01eea71a 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.1E-46 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 9.1E-46 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 9.1E-46 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 272 281 9.1E-46 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 9.1E-46 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 9.1E-46 T 14-10-2018 IPR017861 Kae1/TsaD family IM40_05570 4af016b9503068c74bc9757a01eea71a 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 340 63.332 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 289 4.3E-145 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 Gene3D G3DSA:1.20.58.180 216 293 3.1E-33 T 14-10-2018 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 8.5E-63 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 8.5E-63 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 8.5E-63 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 8.5E-63 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 8.5E-63 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 252 268 8.5E-63 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 289 2.8E-147 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 SUPERFAMILY SSF55681 8 289 2.73E-128 T 14-10-2018 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 Gene3D G3DSA:3.30.930.10 1 215 1.4E-106 T 14-10-2018 IM40_06175 d084056ccbdc238c44e5ef20b4b3fa0c 298 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 292 57.716 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 SUPERFAMILY SSF51735 9 246 1.66E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 Gene3D G3DSA:3.40.50.720 1 247 6.2E-77 T 14-10-2018 IM40_08405 3facfe6cde50d2ccf647e682824b38a7 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 2.0E-54 T 14-10-2018 IM40_01035 b89c643be916b51abdaf75401b3fb441 534 SUPERFAMILY SSF81901 317 386 3.01E-6 T 14-10-2018 IM40_01035 b89c643be916b51abdaf75401b3fb441 534 Gene3D G3DSA:1.25.40.10 281 496 1.5E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 PIRSF PIRSF002131 1 129 6.7E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 Gene3D G3DSA:3.30.420.80 1 129 1.5E-53 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 33.028 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 Pfam PF00411 Ribosomal protein S11 19 128 3.2E-48 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.4E-58 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02135 238fe9252e26e32a8098dbff6e9391dd 129 SUPERFAMILY SSF53137 14 129 2.03E-48 T 14-10-2018 IM40_08810 006fe6a46375de37c3d721ddd347ed49 189 SUPERFAMILY SSF55811 36 185 2.98E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IM40_08810 006fe6a46375de37c3d721ddd347ed49 189 Pfam PF00293 NUDIX domain 63 184 5.0E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IM40_08810 006fe6a46375de37c3d721ddd347ed49 189 Gene3D G3DSA:3.90.79.10 11 189 3.6E-34 T 14-10-2018 IM40_01700 7a2f656d745e5f11b6d2d5ba96ebc3e3 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 326 3.0E-78 T 14-10-2018 IPR010732 Type VI secretion, TssG-like IM40_01700 7a2f656d745e5f11b6d2d5ba96ebc3e3 341 Pfam PF06996 Type VI secretion, TssG 20 326 1.8E-80 T 14-10-2018 IPR010732 Type VI secretion, TssG-like IM40_06915 bd3a6823133ba91283295e0dadb678b5 81 SUPERFAMILY SSF116842 3 69 8.37E-20 T 14-10-2018 IM40_06915 bd3a6823133ba91283295e0dadb678b5 81 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 14.866 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 IM40_06915 bd3a6823133ba91283295e0dadb678b5 81 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 62 1.4E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 IM40_06915 bd3a6823133ba91283295e0dadb678b5 81 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 3 49 2.0E-9 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 IM40_06915 bd3a6823133ba91283295e0dadb678b5 81 Pfam PF02609 Exonuclease VII small subunit 10 60 9.4E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 IM40_06915 bd3a6823133ba91283295e0dadb678b5 81 Gene3D G3DSA:1.10.287.1040 5 80 1.3E-20 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 IM40_09740 5d6bbdc29a9bbfc9fa3e9f8ffebd8266 191 SUPERFAMILY SSF53041 1 135 2.22E-42 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 IM40_09740 5d6bbdc29a9bbfc9fa3e9f8ffebd8266 191 Gene3D G3DSA:3.40.50.1390 1 125 6.9E-46 T 14-10-2018 IM40_09740 5d6bbdc29a9bbfc9fa3e9f8ffebd8266 191 SMART SM00857 2 136 1.0E-49 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_09740 5d6bbdc29a9bbfc9fa3e9f8ffebd8266 191 Pfam PF00239 Resolvase, N terminal domain 3 136 7.0E-42 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 2.7E-73 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 SUPERFAMILY SSF55347 126 235 1.81E-31 T 14-10-2018 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 Gene3D G3DSA:3.40.50.720 4 263 5.7E-92 T 14-10-2018 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 2.9E-42 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 PIRSF PIRSF000161 1 267 2.9E-83 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 SUPERFAMILY SSF51735 1 263 6.97E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 Gene3D G3DSA:3.30.360.10 126 233 5.7E-92 T 14-10-2018 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 3.4E-30 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_06680 9f04dce5dd3137b843db5703f180e89a 272 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 30.704 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IM40_00470 1272e8cb08f20af6f3462d1c87f49094 569 SUPERFAMILY SSF56801 14 562 1.26E-150 T 14-10-2018 IM40_00470 1272e8cb08f20af6f3462d1c87f49094 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 476 550 1.5E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IM40_00470 1272e8cb08f20af6f3462d1c87f49094 569 Gene3D G3DSA:3.30.300.310 462 564 6.8E-28 T 14-10-2018 IM40_00470 1272e8cb08f20af6f3462d1c87f49094 569 Gene3D G3DSA:3.40.50.12780 27 457 4.9E-124 T 14-10-2018 IM40_00470 1272e8cb08f20af6f3462d1c87f49094 569 Pfam PF00501 AMP-binding enzyme 36 466 4.9E-112 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IM40_00470 1272e8cb08f20af6f3462d1c87f49094 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 14-10-2018 IPR020845 AMP-binding, conserved site IM40_10685 5951102edb1e9b27b800c239163f432e 91 Pfam PF01527 Transposase 2 74 8.0E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10685 5951102edb1e9b27b800c239163f432e 91 Gene3D G3DSA:1.10.10.60 17 79 2.0E-5 T 14-10-2018 IM40_10685 5951102edb1e9b27b800c239163f432e 91 SUPERFAMILY SSF46689 2 76 2.33E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10230 5951102edb1e9b27b800c239163f432e 91 Pfam PF01527 Transposase 2 74 8.0E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10230 5951102edb1e9b27b800c239163f432e 91 Gene3D G3DSA:1.10.10.60 17 79 2.0E-5 T 14-10-2018 IM40_10230 5951102edb1e9b27b800c239163f432e 91 SUPERFAMILY SSF46689 2 76 2.33E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_08960 35fd05b472dc352ae5254e2c4c7b7b53 429 SUPERFAMILY SSF56935 37 429 7.12E-22 T 14-10-2018 IM40_08960 35fd05b472dc352ae5254e2c4c7b7b53 429 Gene3D G3DSA:2.40.160.10 33 429 3.2E-23 T 14-10-2018 IPR023614 Porin domain superfamily IM40_08960 35fd05b472dc352ae5254e2c4c7b7b53 429 Pfam PF13609 Gram-negative porin 12 379 5.6E-27 T 14-10-2018 IM40_09105 ae990aa278538a70eb29090762d08d93 184 Pfam PF00227 Proteasome subunit 10 180 8.9E-24 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 IM40_09105 ae990aa278538a70eb29090762d08d93 184 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 182 5.1E-83 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 IM40_09105 ae990aa278538a70eb29090762d08d93 184 Gene3D G3DSA:3.60.20.10 7 183 3.0E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_09105 ae990aa278538a70eb29090762d08d93 184 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 182 40.359 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 IM40_09105 ae990aa278538a70eb29090762d08d93 184 SUPERFAMILY SSF56235 9 182 2.24E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_09105 ae990aa278538a70eb29090762d08d93 184 PIRSF PIRSF039093 5 184 1.6E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 SUPERFAMILY SSF51161 332 485 7.2E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 SUPERFAMILY SSF51735 3 146 1.84E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 Gene3D G3DSA:3.30.360.10 123 276 1.0E-93 T 14-10-2018 IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 362 394 2.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 SUPERFAMILY SSF55347 125 301 5.07E-23 T 14-10-2018 IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 Gene3D G3DSA:3.40.50.720 4 309 1.0E-93 T 14-10-2018 IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 Gene3D G3DSA:2.160.10.10 333 481 3.0E-42 T 14-10-2018 IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 437 466 0.07 T 14-10-2018 IPR001451 Hexapeptide repeat IM40_00080 e637f622068e19bc557ba70ddc1a2c5c 520 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 118 4.8E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 SUPERFAMILY SSF46626 31 218 7.44E-67 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 Pfam PF02167 Cytochrome C1 family 35 252 1.4E-95 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 33 52 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 200 219 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 98 118 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 53 72 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 131 155 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 169 180 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 219 234 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 PRINTS PR00603 Cytochrome C1 signature 180 199 3.7E-65 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 IM40_06780 3b2371f4bd86e0fdaffd8dd345d56e44 255 Gene3D G3DSA:1.10.760.10 25 219 3.3E-85 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 IM40_00905 8f0e21420065bfc7e1e21dfaf6b02d89 66 Pfam PF10276 Zinc-finger domain 30 62 1.7E-10 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_00905 8f0e21420065bfc7e1e21dfaf6b02d89 66 Gene3D G3DSA:2.60.260.40 21 65 1.5E-11 T 14-10-2018 IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 SUPERFAMILY SSF102712 154 194 7.32E-5 T 14-10-2018 IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 175 180 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 Gene3D G3DSA:3.40.140.10 104 226 3.8E-37 T 14-10-2018 IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 Gene3D G3DSA:1.10.150.20 46 88 3.9E-5 T 14-10-2018 IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 Pfam PF04002 RadC-like JAB domain 106 223 4.8E-39 T 14-10-2018 IPR025657 RadC-like JAB domain IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 224 2.6E-67 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 IM40_00570 4264cd430acf74db5f18c50a34dffa44 226 SUPERFAMILY SSF47781 17 86 8.9E-8 T 14-10-2018 IPR010994 RuvA domain 2-like IM40_00135 489892e2690f902870f099de257aa582 1115 SUPERFAMILY SSF48208 56 250 1.36E-10 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 IM40_00135 489892e2690f902870f099de257aa582 1115 Pfam PF00754 F5/8 type C domain 993 1107 4.4E-7 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain IM40_00135 489892e2690f902870f099de257aa582 1115 Gene3D G3DSA:2.60.120.260 982 1113 4.7E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily IM40_00135 489892e2690f902870f099de257aa582 1115 SUPERFAMILY SSF49785 992 1111 6.97E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily IM40_00135 489892e2690f902870f099de257aa582 1115 Pfam PF06662 D-glucuronyl C5-epimerase C-terminus 103 245 1.1E-30 T 14-10-2018 IPR010598 D-glucuronyl C5-epimerase, C-terminal KEGG: 00534+5.1.3.17|MetaCyc: PWY-6558|Reactome: R-HSA-2022928 IM40_00135 489892e2690f902870f099de257aa582 1115 Pfam PF06662 D-glucuronyl C5-epimerase C-terminus 580 719 8.9E-17 T 14-10-2018 IPR010598 D-glucuronyl C5-epimerase, C-terminal KEGG: 00534+5.1.3.17|MetaCyc: PWY-6558|Reactome: R-HSA-2022928 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 Gene3D G3DSA:3.20.20.70 1 216 1.2E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 PIRSF PIRSF001461 1 218 1.2E-85 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 214 8.0E-83 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 201 7.5E-79 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IM40_08640 fd2490d2b72ae7967dafd58c828acb00 218 SUPERFAMILY SSF51366 5 214 2.93E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IM40_07730 86bd70b2c85ffa0482bfc7094bc65a7c 385 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 377 35.101 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 IM40_07730 86bd70b2c85ffa0482bfc7094bc65a7c 385 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 366 5.5E-87 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 IM40_07730 86bd70b2c85ffa0482bfc7094bc65a7c 385 SUPERFAMILY SSF53756 6 381 4.66E-32 T 14-10-2018 IM40_07730 86bd70b2c85ffa0482bfc7094bc65a7c 385 Pfam PF02684 Lipid-A-disaccharide synthetase 6 366 2.9E-112 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 IM40_05620 6ef725633fa1fea8413124edb8f35e56 275 PIRSF PIRSF004789 1 267 1.8E-91 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like IM40_05620 6ef725633fa1fea8413124edb8f35e56 275 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 263 8.6E-82 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like IM40_05620 6ef725633fa1fea8413124edb8f35e56 275 Pfam PF13277 YmdB-like protein 4 261 1.2E-96 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like IM40_05620 6ef725633fa1fea8413124edb8f35e56 275 Gene3D G3DSA:3.60.21.10 1 270 7.9E-99 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like IM40_05620 6ef725633fa1fea8413124edb8f35e56 275 SUPERFAMILY SSF56300 1 262 1.52E-74 T 14-10-2018 IM40_06375 210012242dd995893eafee5509876d71 205 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 6.7E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 6.7E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 6.7E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 6.7E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 6.7E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site IM40_06375 210012242dd995893eafee5509876d71 205 Pfam PF00574 Clp protease 22 201 3.1E-82 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IM40_06375 210012242dd995893eafee5509876d71 205 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 42.892 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 201 7.9E-98 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IM40_06375 210012242dd995893eafee5509876d71 205 SUPERFAMILY SSF52096 20 199 2.32E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IM40_06375 210012242dd995893eafee5509876d71 205 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site IM40_06375 210012242dd995893eafee5509876d71 205 Gene3D G3DSA:3.90.226.10 3 203 1.9E-81 T 14-10-2018 IM40_01360 49b56373005c4b3df0bfb9df2ee54ece 97 Pfam PF03795 YCII-related domain 18 81 8.9E-5 T 14-10-2018 IPR005545 YCII-related IM40_01360 49b56373005c4b3df0bfb9df2ee54ece 97 SUPERFAMILY SSF54909 19 77 9.65E-9 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 Gene3D G3DSA:3.90.870.10 1 204 1.1E-71 T 14-10-2018 IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 PIRSF PIRSF004930 1 313 8.1E-98 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 Pfam PF01300 Telomere recombination 12 190 3.8E-52 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 Pfam PF03481 Putative GTP-binding controlling metal-binding 192 309 4.4E-18 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 SUPERFAMILY SSF55821 2 203 2.69E-61 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 Gene3D G3DSA:3.40.50.11030 205 313 1.5E-12 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily IM40_04100 6c53831b374fc916d0aa0045b853fdd0 313 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 200 5.9E-52 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 IM40_10840 07b95ffb9287ea49e3e3fd8596d283c4 97 Pfam PF01527 Transposase 2 79 2.3E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10840 07b95ffb9287ea49e3e3fd8596d283c4 97 SUPERFAMILY SSF46689 4 88 1.97E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10840 07b95ffb9287ea49e3e3fd8596d283c4 97 Gene3D G3DSA:1.10.10.60 8 88 9.1E-16 T 14-10-2018 IM40_10075 8faf30b6d69fda25619316e9589464f9 222 Pfam PF04335 VirB8 protein 11 213 1.1E-30 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 IM40_10075 8faf30b6d69fda25619316e9589464f9 222 Gene3D G3DSA:3.10.450.230 79 215 4.8E-24 T 14-10-2018 IM40_10075 8faf30b6d69fda25619316e9589464f9 222 SUPERFAMILY SSF54427 86 213 2.63E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily IM40_08220 e6a57ddba7c77e30e3a9d16f926bb6b7 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 90 5.4E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_08220 e6a57ddba7c77e30e3a9d16f926bb6b7 97 Gene3D G3DSA:3.30.2310.20 3 96 8.2E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_03060 843858c416ddd5b5daf379d88cb5ffa3 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 110 3.4E-28 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 IM40_03060 843858c416ddd5b5daf379d88cb5ffa3 135 Pfam PF03061 Thioesterase superfamily 18 99 3.8E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IM40_03060 843858c416ddd5b5daf379d88cb5ffa3 135 SUPERFAMILY SSF54637 2 130 5.42E-32 T 14-10-2018 IPR029069 HotDog domain superfamily IM40_03060 843858c416ddd5b5daf379d88cb5ffa3 135 Gene3D G3DSA:3.10.129.10 3 133 9.9E-31 T 14-10-2018 IM40_03060 843858c416ddd5b5daf379d88cb5ffa3 135 PIRSF PIRSF003230 1 135 3.8E-42 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 IM40_04635 29f46235d0d5be7695a051a8c9efd47e 341 SUPERFAMILY SSF51412 17 328 9.01E-57 T 14-10-2018 IM40_04635 29f46235d0d5be7695a051a8c9efd47e 341 Pfam PF03060 Nitronate monooxygenase 15 326 1.5E-53 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 IM40_04635 29f46235d0d5be7695a051a8c9efd47e 341 Gene3D G3DSA:3.20.20.70 15 339 3.2E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 ProSitePatterns PS01244 Aconitase family signature 2. 491 504 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 Pfam PF00694 Aconitase C-terminal domain 690 817 4.8E-48 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 888 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 Pfam PF00330 Aconitase family (aconitate hydratase) 74 560 8.7E-186 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 SUPERFAMILY SSF53732 8 621 9.42E-228 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 ProSitePatterns PS00450 Aconitase family signature 1. 425 441 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 Gene3D G3DSA:3.30.499.10 375 588 8.6E-98 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 SUPERFAMILY SSF52016 629 887 9.22E-87 T 14-10-2018 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 Gene3D G3DSA:3.20.19.10 651 891 6.2E-104 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 148 161 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 491 504 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 429 440 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 205 218 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 295 308 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 172 180 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 374 388 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 219 234 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 PRINTS PR00415 Aconitase family signature 281 294 3.0E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 Gene3D G3DSA:3.30.499.20 9 374 3.1E-162 T 14-10-2018 IM40_07660 50df88f193dd73fee9754be5522d7a16 892 Gene3D G3DSA:1.10.1440.20 589 649 6.2E-18 T 14-10-2018 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 226 2.5E-95 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 39.812 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 SUPERFAMILY SSF52313 8 236 1.44E-89 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 Pfam PF00318 Ribosomal protein S2 11 225 1.1E-90 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 IM40_04545 d3db7399c8f6be728e1fc7b175d0f6ce 272 Gene3D G3DSA:1.10.287.610 102 152 3.8E-18 T 14-10-2018 IM40_04965 0899bd38b82589b7553b9c08fb6fca4c 480 Gene3D G3DSA:3.40.1090.10 156 480 1.6E-64 T 14-10-2018 IM40_04965 0899bd38b82589b7553b9c08fb6fca4c 480 Pfam PF01734 Patatin-like phospholipase 171 352 1.8E-23 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_04965 0899bd38b82589b7553b9c08fb6fca4c 480 SUPERFAMILY SSF52151 170 469 1.05E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_03335 2c16eb21bdce1bba57016c279393e11c 177 PIRSF PIRSF016661 3 177 7.4E-46 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 IM40_03335 2c16eb21bdce1bba57016c279393e11c 177 Pfam PF02632 BioY family 33 172 3.0E-37 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 IM40_03335 2c16eb21bdce1bba57016c279393e11c 177 Gene3D G3DSA:1.10.1760.20 5 175 5.4E-45 T 14-10-2018 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 Gene3D G3DSA:4.10.950.10 196 274 5.5E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.1E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 Gene3D G3DSA:2.30.30.30 115 195 5.3E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 SUPERFAMILY SSF50249 3 125 4.46E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold IM40_02035 5b95898901c9d6402f59eec03efe378b 275 Gene3D G3DSA:2.40.50.140 1 114 6.8E-45 T 14-10-2018 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 SUPERFAMILY SSF50104 127 272 4.51E-60 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily IM40_02035 5b95898901c9d6402f59eec03efe378b 275 SMART SM01382 124 252 2.7E-88 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.089 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 7.3E-30 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 PIRSF PIRSF002158 4 275 9.6E-104 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 SMART SM01383 42 118 8.5E-42 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02035 5b95898901c9d6402f59eec03efe378b 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.5E-123 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 IM40_05550 a9d71051ed00b98f7056842f619cc7f7 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 231 7.8E-31 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IM40_05550 a9d71051ed00b98f7056842f619cc7f7 320 SUPERFAMILY SSF51735 3 317 4.08E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_05550 a9d71051ed00b98f7056842f619cc7f7 320 Gene3D G3DSA:3.40.50.720 2 320 1.3E-61 T 14-10-2018 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 Gene3D G3DSA:3.40.50.300 21 184 2.2E-13 T 14-10-2018 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 SUPERFAMILY SSF48452 452 615 7.97E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 SUPERFAMILY SSF52540 26 283 7.98E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 SUPERFAMILY SSF48452 595 711 5.63E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 PRINTS PR00364 Disease resistance protein signature 213 227 2.8E-5 T 14-10-2018 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 PRINTS PR00364 Disease resistance protein signature 54 69 2.8E-5 T 14-10-2018 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 PRINTS PR00364 Disease resistance protein signature 133 147 2.8E-5 T 14-10-2018 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 Gene3D G3DSA:1.25.40.10 447 622 6.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07805 6fd90c1d335661ec3f7f7d549fbd82a1 773 Gene3D G3DSA:1.25.40.10 623 756 9.6E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 Gene3D G3DSA:3.40.50.2300 1 121 7.1E-37 T 14-10-2018 IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 SUPERFAMILY SSF52172 1 174 7.68E-40 T 14-10-2018 IPR011006 CheY-like superfamily IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 Gene3D G3DSA:1.10.10.10 123 240 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 SMART SM00862 145 221 3.4E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 SMART SM00448 1 112 6.4E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_06635 444f2bf81729f2fcdc379be927800f4b 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 2.5E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 502 2.4E-125 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 52 68 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 33 52 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 409 426 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 259 285 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 357 376 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 157 178 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PRINTS PR01806 Virulence factor MviN signature 133 157 3.4E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 19.021 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 PIRSF PIRSF002869 1 511 4.7E-151 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_06980 0421f1c4dc3e3dcab87fdbb879d015f9 516 Pfam PF03023 MviN-like protein 28 465 5.4E-116 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IM40_09695 8d839bcb9750b1a16baafd9dcc4c817f 84 Gene3D G3DSA:3.40.50.1390 27 79 4.9E-11 T 14-10-2018 IM40_09695 8d839bcb9750b1a16baafd9dcc4c817f 84 Pfam PF00239 Resolvase, N terminal domain 29 75 1.9E-7 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 IM40_09695 8d839bcb9750b1a16baafd9dcc4c817f 84 ProSitePatterns PS00397 Site-specific recombinases active site. 31 39 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 IM40_09695 8d839bcb9750b1a16baafd9dcc4c817f 84 SUPERFAMILY SSF53041 27 75 1.01E-11 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 IM40_11490 3d9b97611dd371229f8fc944b08b63f5 641 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 209 631 8.4E-74 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 IM40_11490 3d9b97611dd371229f8fc944b08b63f5 641 Gene3D G3DSA:3.40.50.300 404 634 6.3E-39 T 14-10-2018 IM40_11490 3d9b97611dd371229f8fc944b08b63f5 641 SUPERFAMILY SSF52540 162 632 5.04E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09510 aa34ae772e01fa9f744378d0c9875498 96 SUPERFAMILY SSF46689 4 89 1.79E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_09510 aa34ae772e01fa9f744378d0c9875498 96 Gene3D G3DSA:1.10.10.60 8 88 8.3E-16 T 14-10-2018 IM40_09510 aa34ae772e01fa9f744378d0c9875498 96 Pfam PF01527 Transposase 2 79 2.2E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_03640 a5564b6cbfb243590f5282f75ae5396d 237 SUPERFAMILY SSF47090 167 232 3.34E-13 T 14-10-2018 IPR036365 PGBD-like superfamily IM40_03640 a5564b6cbfb243590f5282f75ae5396d 237 SUPERFAMILY SSF55846 4 159 3.14E-55 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_03640 a5564b6cbfb243590f5282f75ae5396d 237 Gene3D G3DSA:3.40.80.10 1 156 7.2E-50 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_03640 a5564b6cbfb243590f5282f75ae5396d 237 SMART SM00644 7 145 3.4E-30 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_03640 a5564b6cbfb243590f5282f75ae5396d 237 Gene3D G3DSA:1.10.101.10 166 235 3.5E-14 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 IM40_03640 a5564b6cbfb243590f5282f75ae5396d 237 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 145 6.9E-32 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IM40_10985 67d2d85e10f9089613e95af7ff13c474 339 Gene3D G3DSA:1.10.10.60 3 43 2.6E-5 T 14-10-2018 IM40_10985 67d2d85e10f9089613e95af7ff13c474 339 SUPERFAMILY SSF53098 118 294 1.97E-22 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_10985 67d2d85e10f9089613e95af7ff13c474 339 Pfam PF13936 Helix-turn-helix domain 3 40 6.1E-7 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain IM40_10985 67d2d85e10f9089613e95af7ff13c474 339 Gene3D G3DSA:3.30.420.10 116 277 9.2E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_10985 67d2d85e10f9089613e95af7ff13c474 339 Pfam PF00665 Integrase core domain 118 243 2.2E-29 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_09890 2a4517619cc595fac7ffa8f341fc9e35 309 Pfam PF03466 LysR substrate binding domain 88 290 2.5E-22 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_09890 2a4517619cc595fac7ffa8f341fc9e35 309 SUPERFAMILY SSF53850 89 294 9.93E-29 T 14-10-2018 IM40_09890 2a4517619cc595fac7ffa8f341fc9e35 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.4E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_09890 2a4517619cc595fac7ffa8f341fc9e35 309 SUPERFAMILY SSF46785 2 84 3.54E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_09890 2a4517619cc595fac7ffa8f341fc9e35 309 Gene3D G3DSA:3.40.190.290 92 292 1.2E-37 T 14-10-2018 IM40_09890 2a4517619cc595fac7ffa8f341fc9e35 309 Gene3D G3DSA:1.10.10.10 2 91 9.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_04980 c33fb0cc8acfc899458452253631e446 297 Gene3D G3DSA:3.40.190.290 91 293 6.9E-25 T 14-10-2018 IM40_04980 c33fb0cc8acfc899458452253631e446 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_04980 c33fb0cc8acfc899458452253631e446 297 Gene3D G3DSA:1.10.10.10 1 90 8.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_04980 c33fb0cc8acfc899458452253631e446 297 SUPERFAMILY SSF53850 87 293 2.17E-21 T 14-10-2018 IM40_04980 c33fb0cc8acfc899458452253631e446 297 SUPERFAMILY SSF46785 1 87 3.88E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_04980 c33fb0cc8acfc899458452253631e446 297 Pfam PF03466 LysR substrate binding domain 87 292 3.7E-16 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_09925 7c83b6d81a1890abaf3ca5a21b01aacc 129 Gene3D G3DSA:3.40.50.1010 5 125 2.6E-17 T 14-10-2018 IM40_09925 7c83b6d81a1890abaf3ca5a21b01aacc 129 SUPERFAMILY SSF88723 1 120 5.61E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_09925 7c83b6d81a1890abaf3ca5a21b01aacc 129 Pfam PF01850 PIN domain 5 100 1.1E-6 T 14-10-2018 IPR002716 PIN domain IM40_01975 fd3e4bc7fd11e1099b5cd0bfe420d40d 211 Gene3D G3DSA:3.40.50.10610 26 210 1.4E-35 T 14-10-2018 IM40_01975 fd3e4bc7fd11e1099b5cd0bfe420d40d 211 SUPERFAMILY SSF159594 43 204 1.7E-22 T 14-10-2018 IM40_01975 fd3e4bc7fd11e1099b5cd0bfe420d40d 211 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 50 192 2.0E-9 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component IM40_03040 f157a4ccd5f76db829884b44374a621b 433 SUPERFAMILY SSF52954 326 432 4.74E-29 T 14-10-2018 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 Pfam PF03129 Anticodon binding domain 337 428 2.6E-18 T 14-10-2018 IPR004154 Anticodon-binding IM40_03040 f157a4ccd5f76db829884b44374a621b 433 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.9E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.9E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.9E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.9E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 225 3.6E-99 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 SUPERFAMILY SSF55681 9 339 4.98E-91 T 14-10-2018 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 321 3.5E-31 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 Gene3D G3DSA:3.40.50.800 323 433 1.1E-29 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily IM40_03040 f157a4ccd5f76db829884b44374a621b 433 Gene3D G3DSA:3.30.930.10 1 322 5.9E-108 T 14-10-2018 IM40_03040 f157a4ccd5f76db829884b44374a621b 433 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 429 57.633 T 14-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 IM40_09010 3f268f1ae54c8b12c8ae73daa09c363c 262 Pfam PF13614 AAA domain 1 176 1.1E-63 T 14-10-2018 IPR025669 AAA domain IM40_09010 3f268f1ae54c8b12c8ae73daa09c363c 262 SUPERFAMILY SSF52540 1 253 4.41E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09010 3f268f1ae54c8b12c8ae73daa09c363c 262 Gene3D G3DSA:3.40.50.300 1 260 5.3E-82 T 14-10-2018 IM40_00500 5ade8f72466626a1a2fc32cc6a5996c0 385 Pfam PF00144 Beta-lactamase 24 353 2.9E-47 T 14-10-2018 IPR001466 Beta-lactamase-related IM40_00500 5ade8f72466626a1a2fc32cc6a5996c0 385 SUPERFAMILY SSF56601 21 367 4.51E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IM40_00500 5ade8f72466626a1a2fc32cc6a5996c0 385 Gene3D G3DSA:3.40.710.10 20 363 6.6E-71 T 14-10-2018 IM40_08040 28eba8e491e5fe205fff7e924f5cec64 103 SUPERFAMILY SSF48657 32 83 6.8E-7 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_08465 28eba8e491e5fe205fff7e924f5cec64 103 SUPERFAMILY SSF48657 32 83 6.8E-7 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_05525 fed7315cfca05157d63f836befa5f1f8 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 215 5.5E-15 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IM40_05525 fed7315cfca05157d63f836befa5f1f8 308 Gene3D G3DSA:3.40.50.720 1 224 1.8E-39 T 14-10-2018 IM40_05525 fed7315cfca05157d63f836befa5f1f8 308 SUPERFAMILY SSF51735 1 268 2.2E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 SUPERFAMILY SSF56176 24 208 6.91E-45 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 Gene3D G3DSA:3.30.465.10 89 214 2.5E-38 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 SUPERFAMILY SSF56194 198 303 1.7E-34 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 Pfam PF01565 FAD binding domain 38 164 5.2E-18 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 310 90.942 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 198 295 1.6E-26 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 28 294 5.5E-57 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 Gene3D G3DSA:3.30.43.10 4 87 1.0E-20 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 IM40_02860 53522da5b2baeb673898765b2e58a5e8 310 Gene3D G3DSA:3.90.78.10 215 306 4.9E-30 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IM40_00175 cff2be4be3d67b270de2f764c16f7bd9 624 Pfam PF01841 Transglutaminase-like superfamily 326 415 1.8E-8 T 14-10-2018 IPR002931 Transglutaminase-like IM40_00175 cff2be4be3d67b270de2f764c16f7bd9 624 Gene3D G3DSA:3.10.620.30 287 425 3.6E-12 T 14-10-2018 IM40_00175 cff2be4be3d67b270de2f764c16f7bd9 624 SUPERFAMILY SSF54001 321 417 3.64E-12 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily IM40_00175 cff2be4be3d67b270de2f764c16f7bd9 624 SMART SM00460 359 417 0.0013 T 14-10-2018 IPR002931 Transglutaminase-like IM40_09425 ee7034c1a075fc31d6b4d810979d5866 101 Gene3D G3DSA:1.10.260.40 2 98 2.7E-30 T 14-10-2018 IM40_09425 ee7034c1a075fc31d6b4d810979d5866 101 Pfam PF01381 Helix-turn-helix 19 70 2.3E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_09425 ee7034c1a075fc31d6b4d810979d5866 101 SMART SM00530 15 71 2.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_09425 ee7034c1a075fc31d6b4d810979d5866 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 85 1.5E-27 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 IM40_09425 ee7034c1a075fc31d6b4d810979d5866 101 SUPERFAMILY SSF47413 12 91 7.88E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_00305 548a88ffc9badf8bd93ed27734ec8a17 219 Pfam PF03968 OstA-like protein 39 183 7.1E-9 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal IM40_00305 548a88ffc9badf8bd93ed27734ec8a17 219 Gene3D G3DSA:2.60.450.10 31 96 4.7E-5 T 14-10-2018 IM40_00305 548a88ffc9badf8bd93ed27734ec8a17 219 Gene3D G3DSA:2.60.450.10 97 219 4.4E-5 T 14-10-2018 IM40_00145 ce2b8c3aeda14aca35400579427da26a 404 Gene3D G3DSA:3.40.50.2000 216 372 6.7E-20 T 14-10-2018 IM40_00145 ce2b8c3aeda14aca35400579427da26a 404 Gene3D G3DSA:3.40.50.2000 3 211 2.5E-12 T 14-10-2018 IM40_00145 ce2b8c3aeda14aca35400579427da26a 404 Pfam PF13692 Glycosyl transferases group 1 224 366 2.1E-11 T 14-10-2018 IM40_00145 ce2b8c3aeda14aca35400579427da26a 404 SUPERFAMILY SSF53756 17 402 4.29E-33 T 14-10-2018 IM40_00145 ce2b8c3aeda14aca35400579427da26a 404 Pfam PF13439 Glycosyltransferase Family 4 23 196 2.6E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IM40_07095 46b359b3a91daea75daf9873dd5a911c 165 Gene3D G3DSA:2.30.30.840 2 68 2.4E-23 T 14-10-2018 IM40_07095 46b359b3a91daea75daf9873dd5a911c 165 SMART SM01058 6 116 6.4E-28 T 14-10-2018 IPR003711 CarD-like/TRCF domain IM40_07095 46b359b3a91daea75daf9873dd5a911c 165 SUPERFAMILY SSF141259 5 72 6.54E-15 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily IM40_07095 46b359b3a91daea75daf9873dd5a911c 165 Gene3D G3DSA:1.20.58.1290 69 163 2.9E-23 T 14-10-2018 IM40_07095 46b359b3a91daea75daf9873dd5a911c 165 Pfam PF02559 CarD-like/TRCF domain 7 114 7.0E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 PIRSF PIRSF001589 1 627 8.3E-155 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 563 4.2E-153 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 SUPERFAMILY SSF56235 1 226 1.37E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 Pfam PF13537 Glutamine amidotransferase domain 52 169 2.1E-42 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 Pfam PF00733 Asparagine synthase 242 621 2.0E-86 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 SUPERFAMILY SSF52402 222 620 6.9E-67 T 14-10-2018 IM40_00140 e8aeeab9cfcb07ec0778b09c8c939de5 629 Gene3D G3DSA:3.60.20.10 2 186 5.9E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IM40_02170 09de02117e8da76230dcd878945096a8 225 Gene3D G3DSA:1.20.910.10 6 223 5.1E-16 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_02170 09de02117e8da76230dcd878945096a8 225 Pfam PF03070 TENA/THI-4/PQQC family 98 217 1.2E-7 T 14-10-2018 IPR004305 Thiaminase-2/PQQC IM40_02170 09de02117e8da76230dcd878945096a8 225 SUPERFAMILY SSF48613 23 219 1.98E-14 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_08605 c37ec141d6fc788fec26472bf44972bf 282 SUPERFAMILY SSF53098 105 266 2.12E-32 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_08605 c37ec141d6fc788fec26472bf44972bf 282 Gene3D G3DSA:3.30.420.10 107 273 7.6E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_08605 c37ec141d6fc788fec26472bf44972bf 282 Pfam PF13276 HTH-like domain 32 85 8.1E-18 T 14-10-2018 IPR025948 HTH-like domain IM40_08605 c37ec141d6fc788fec26472bf44972bf 282 Pfam PF00665 Integrase core domain 113 225 1.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_07865 5306a1b997b3b1ece329eae2b227044d 189 Pfam PF05309 TraE protein 1 179 2.4E-48 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 IM40_07865 5306a1b997b3b1ece329eae2b227044d 189 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 179 7.9E-38 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 IM40_09455 c36d3658f28144a9739493f88ab481f8 123 Pfam PF01527 Transposase 16 84 2.1E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_09455 c36d3658f28144a9739493f88ab481f8 123 SUPERFAMILY SSF48295 15 64 3.77E-9 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 IM40_11390 2765f0f15ee63bbac7c2e07b1d52e5b0 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 274 1.1E-17 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_11390 2765f0f15ee63bbac7c2e07b1d52e5b0 314 Pfam PF01548 Transposase 8 141 3.7E-18 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_05595 10efc84f83f2af542aa505255769707e 419 Pfam PF05193 Peptidase M16 inactive domain 166 338 1.6E-42 T 14-10-2018 IPR007863 Peptidase M16, C-terminal IM40_05595 10efc84f83f2af542aa505255769707e 419 SUPERFAMILY SSF63411 221 410 7.17E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IM40_05595 10efc84f83f2af542aa505255769707e 419 SUPERFAMILY SSF63411 3 206 1.51E-57 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IM40_05595 10efc84f83f2af542aa505255769707e 419 Gene3D G3DSA:3.30.830.10 3 216 7.7E-69 T 14-10-2018 IM40_05595 10efc84f83f2af542aa505255769707e 419 Gene3D G3DSA:3.30.830.10 220 419 2.2E-58 T 14-10-2018 IM40_05595 10efc84f83f2af542aa505255769707e 419 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 IM40_05595 10efc84f83f2af542aa505255769707e 419 Pfam PF00675 Insulinase (Peptidase family M16) 14 158 1.2E-38 T 14-10-2018 IPR011765 Peptidase M16, N-terminal IM40_00350 e0bfe429a6438517b869f78491348a42 212 SUPERFAMILY SSF88697 11 198 5.47E-35 T 14-10-2018 IPR015947 PUA-like superfamily IM40_00350 e0bfe429a6438517b869f78491348a42 212 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 198 1.4E-20 T 14-10-2018 IPR003111 Lon, substrate-binding domain IM40_00350 e0bfe429a6438517b869f78491348a42 212 SMART SM00464 11 199 6.2E-11 T 14-10-2018 IPR003111 Lon, substrate-binding domain IM40_00350 e0bfe429a6438517b869f78491348a42 212 Gene3D G3DSA:2.30.130.40 4 114 4.0E-21 T 14-10-2018 IM40_08310 e62190ebf4cf08086be918fe6e73bf7e 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 85 1.5E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_08310 e62190ebf4cf08086be918fe6e73bf7e 94 Gene3D G3DSA:3.30.2310.20 1 91 2.8E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_08310 e62190ebf4cf08086be918fe6e73bf7e 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 1.6E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_11195 3fe4357706b1724ed8fde222b01b1c62 318 Gene3D G3DSA:3.30.450.90 22 116 1.8E-5 T 14-10-2018 IM40_11195 3fe4357706b1724ed8fde222b01b1c62 318 SUPERFAMILY SSF52540 19 298 3.44E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11195 3fe4357706b1724ed8fde222b01b1c62 318 Pfam PF00437 Type II/IV secretion system protein 26 294 1.7E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein IM40_11195 3fe4357706b1724ed8fde222b01b1c62 318 Gene3D G3DSA:3.40.50.300 117 316 8.0E-47 T 14-10-2018 IM40_09275 3fe4357706b1724ed8fde222b01b1c62 318 Gene3D G3DSA:3.30.450.90 22 116 1.8E-5 T 14-10-2018 IM40_09275 3fe4357706b1724ed8fde222b01b1c62 318 SUPERFAMILY SSF52540 19 298 3.44E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09275 3fe4357706b1724ed8fde222b01b1c62 318 Pfam PF00437 Type II/IV secretion system protein 26 294 1.7E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein IM40_09275 3fe4357706b1724ed8fde222b01b1c62 318 Gene3D G3DSA:3.40.50.300 117 316 8.0E-47 T 14-10-2018 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 14 485 1.1E-176 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 Gene3D G3DSA:3.40.50.1580 174 485 1.0E-98 T 14-10-2018 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 Hamap MF_01932 AMP nucleosidase [amn]. 5 485 54.195 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 SUPERFAMILY SSF53167 11 485 2.75E-134 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 166 1.1E-34 T 14-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 Pfam PF01048 Phosphorylase superfamily 270 429 5.8E-11 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 IM40_04575 20bae64fa3f3b164d4484d9d873b4b4d 485 Gene3D G3DSA:3.30.1730.10 7 171 1.7E-37 T 14-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 IM40_10170 bbf3a4d91c13a66b68dc43f114ff6242 303 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 300 4.7E-25 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA IM40_10170 bbf3a4d91c13a66b68dc43f114ff6242 303 Pfam PF04754 Putative transposase, YhgA-like 7 204 2.2E-55 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like IM40_06855 47ad16e03041ee36c6825403ea246cad 194 SUPERFAMILY SSF141452 45 192 2.75E-5 T 14-10-2018 IPR036624 Hcp1-like superfamily IM40_06855 47ad16e03041ee36c6825403ea246cad 194 Gene3D G3DSA:2.30.110.20 42 192 3.9E-6 T 14-10-2018 IPR036624 Hcp1-like superfamily IM40_03490 0a8d0c27c6c8624010035fa4c8dabfac 223 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 18 207 5.6E-19 T 14-10-2018 IPR019027 Pilus biogenesis CpaD-related IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 2.1E-193 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 1.1E-65 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 SUPERFAMILY SSF53901 1 258 6.39E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 SMART SM00825 Beta-ketoacyl synthase 4 420 3.7E-17 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 Gene3D G3DSA:3.40.47.10 1 261 1.4E-93 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 SUPERFAMILY SSF53901 222 418 2.1E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 5.8E-38 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 PIRSF PIRSF000447 1 420 2.2E-191 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 IM40_01160 5c7f2c3e21efeca39d6e801009ffd373 420 Gene3D G3DSA:3.40.47.10 263 408 2.4E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 254 266 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 Gene3D G3DSA:3.20.20.70 5 337 1.7E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 15 333 8.4E-126 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 SUPERFAMILY SSF51569 8 336 6.3E-127 T 14-10-2018 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 SMART SM01004 12 335 1.1E-189 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 8.4E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 131 145 8.4E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 8.4E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 279 294 8.4E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 309 328 8.4E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 254 270 8.4E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_02900 58ded45787bb1c73414702e7c3f4ba71 337 PIRSF PIRSF001415 6 337 3.0E-135 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IM40_07870 6db11e83ca4ad588e1b0b93285450702 233 Pfam PF06586 TraK protein 6 223 3.0E-32 T 14-10-2018 IPR010563 Pilus assembly TraK IM40_11285 bbed2a955ece2881a1647a5849cd8c37 287 SUPERFAMILY SSF103481 197 273 2.22E-8 T 14-10-2018 IM40_11285 bbed2a955ece2881a1647a5849cd8c37 287 SUPERFAMILY SSF103481 40 137 1.24E-10 T 14-10-2018 IM40_11285 bbed2a955ece2881a1647a5849cd8c37 287 Pfam PF00892 EamA-like transporter family 145 271 6.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_11285 bbed2a955ece2881a1647a5849cd8c37 287 Pfam PF00892 EamA-like transporter family 5 135 2.0E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_07120 a42b36814890c779e0555b1268d804b5 239 Pfam PF00005 ABC transporter 27 174 6.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_07120 a42b36814890c779e0555b1268d804b5 239 SMART SM00382 36 230 6.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_07120 a42b36814890c779e0555b1268d804b5 239 Gene3D G3DSA:3.40.50.300 4 232 1.7E-53 T 14-10-2018 IM40_07120 a42b36814890c779e0555b1268d804b5 239 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_07120 a42b36814890c779e0555b1268d804b5 239 SUPERFAMILY SSF52540 11 224 9.51E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11215 c316790f7f8772905295f16d7d8cadac 222 Pfam PF04335 VirB8 protein 11 213 1.5E-31 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 IM40_11215 c316790f7f8772905295f16d7d8cadac 222 SUPERFAMILY SSF54427 86 213 1.71E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily IM40_11215 c316790f7f8772905295f16d7d8cadac 222 Gene3D G3DSA:3.10.450.230 79 215 1.7E-22 T 14-10-2018 IM40_09255 c316790f7f8772905295f16d7d8cadac 222 Pfam PF04335 VirB8 protein 11 213 1.5E-31 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 IM40_09255 c316790f7f8772905295f16d7d8cadac 222 SUPERFAMILY SSF54427 86 213 1.71E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily IM40_09255 c316790f7f8772905295f16d7d8cadac 222 Gene3D G3DSA:3.10.450.230 79 215 1.7E-22 T 14-10-2018 IM40_04315 5a39523aee9b8bd49fd3c3a44f0d95c0 147 Pfam PF01957 NfeD-like C-terminal, partner-binding 11 145 7.1E-24 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain IM40_04735 677cf63b441667f8d7443955f9e10865 646 Pfam PF00326 Prolyl oligopeptidase family 399 610 6.4E-43 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 IM40_04735 677cf63b441667f8d7443955f9e10865 646 Gene3D G3DSA:3.40.50.1820 322 631 6.0E-77 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_04735 677cf63b441667f8d7443955f9e10865 646 Gene3D G3DSA:2.120.10.30 8 182 1.1E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IM40_04735 677cf63b441667f8d7443955f9e10865 646 SUPERFAMILY SSF82171 16 337 8.44E-15 T 14-10-2018 IM40_04735 677cf63b441667f8d7443955f9e10865 646 SUPERFAMILY SSF53474 349 610 2.74E-72 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_04525 f97a9286ae527b0c0b017c18c31cf77c 245 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 IM40_04525 f97a9286ae527b0c0b017c18c31cf77c 245 Gene3D G3DSA:3.40.1180.10 6 242 4.7E-95 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 IM40_04525 f97a9286ae527b0c0b017c18c31cf77c 245 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 14 242 39.76 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 IM40_04525 f97a9286ae527b0c0b017c18c31cf77c 245 SUPERFAMILY SSF64005 13 237 6.15E-85 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 IM40_04525 f97a9286ae527b0c0b017c18c31cf77c 245 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 14 241 7.5E-86 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 IM40_04525 f97a9286ae527b0c0b017c18c31cf77c 245 Pfam PF01255 Putative undecaprenyl diphosphate synthase 21 241 7.1E-82 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 IM40_07605 5c0029e500c521b4ee361ac8437b8e10 153 PRINTS PR01853 Bacterial YajC preprotein translocase signature 25 45 2.2E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC IM40_07605 5c0029e500c521b4ee361ac8437b8e10 153 PRINTS PR01853 Bacterial YajC preprotein translocase signature 63 81 2.2E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC IM40_07605 5c0029e500c521b4ee361ac8437b8e10 153 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 26 106 5.2E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC IM40_07605 5c0029e500c521b4ee361ac8437b8e10 153 SMART SM01323 23 106 4.6E-39 T 14-10-2018 IPR003849 Preprotein translocase YajC IM40_07605 5c0029e500c521b4ee361ac8437b8e10 153 Pfam PF02699 Preprotein translocase subunit 26 103 2.1E-28 T 14-10-2018 IPR003849 Preprotein translocase YajC IM40_07080 8c14f134e652efcb42e07093b3107d1d 402 SUPERFAMILY SSF103473 14 396 1.02E-60 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_07080 8c14f134e652efcb42e07093b3107d1d 402 Pfam PF00083 Sugar (and other) transporter 253 397 3.1E-5 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IM40_07080 8c14f134e652efcb42e07093b3107d1d 402 Gene3D G3DSA:1.20.1250.20 245 402 1.2E-22 T 14-10-2018 IM40_07080 8c14f134e652efcb42e07093b3107d1d 402 Gene3D G3DSA:1.20.1250.20 13 244 2.3E-29 T 14-10-2018 IM40_07080 8c14f134e652efcb42e07093b3107d1d 402 Pfam PF07690 Major Facilitator Superfamily 22 242 7.9E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_00510 ebf2102c4ec72a3dbc0bcdbb6ad51175 67 Pfam PF04588 Hypoxia induced protein conserved region 9 56 1.8E-7 T 14-10-2018 IPR007667 Hypoxia induced protein, domain IM40_03250 8e0daf44806b38b4cd8e8a0b9200fd1d 189 Hamap MF_00146 dCTP deaminase [dcd]. 2 184 27.697 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 IM40_03250 8e0daf44806b38b4cd8e8a0b9200fd1d 189 SUPERFAMILY SSF51283 3 185 9.29E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily IM40_03250 8e0daf44806b38b4cd8e8a0b9200fd1d 189 Gene3D G3DSA:2.70.40.10 1 156 1.8E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily IM40_03250 8e0daf44806b38b4cd8e8a0b9200fd1d 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 183 1.7E-46 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 IM40_03250 8e0daf44806b38b4cd8e8a0b9200fd1d 189 Pfam PF00692 dUTPase 75 180 3.7E-5 T 14-10-2018 IPR029054 dUTPase-like IM40_06275 b6a85502c0a241de639088c573c98adc 246 Pfam PF00156 Phosphoribosyl transferase domain 145 239 2.2E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 IM40_06275 b6a85502c0a241de639088c573c98adc 246 SUPERFAMILY SSF53271 66 241 1.44E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like IM40_06275 b6a85502c0a241de639088c573c98adc 246 Gene3D G3DSA:3.40.50.2020 115 245 7.3E-22 T 14-10-2018 IM40_06555 e7030fc45fd60e00495cad40f20d2fee 440 SUPERFAMILY SSF48452 214 407 1.54E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 Pfam PF01632 Ribosomal protein L35 2 60 9.5E-20 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.108 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.8E-10 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.8E-10 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.8E-10 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 65 9.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 Gene3D G3DSA:2.40.50.530 1 65 1.1E-22 T 14-10-2018 IM40_04970 1a714cd86f8e6426d9a7c02e3e5ac03a 67 SUPERFAMILY SSF143034 2 61 1.22E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03210 442216a30281be1401410a61b150c41c 482 SUPERFAMILY SSF48024 10 121 6.15E-33 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 IM40_03210 442216a30281be1401410a61b150c41c 482 Gene3D G3DSA:3.40.50.300 170 471 3.2E-104 T 14-10-2018 IM40_03210 442216a30281be1401410a61b150c41c 482 SUPERFAMILY SSF52540 190 462 6.91E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03210 442216a30281be1401410a61b150c41c 482 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 12 471 1.0E-159 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 IM40_03210 442216a30281be1401410a61b150c41c 482 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 7.7E-29 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 IM40_03210 442216a30281be1401410a61b150c41c 482 Gene3D G3DSA:1.10.860.10 4 169 9.0E-42 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IM40_03210 442216a30281be1401410a61b150c41c 482 Pfam PF03796 DnaB-like helicase C terminal domain 190 470 2.6E-106 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 IM40_03210 442216a30281be1401410a61b150c41c 482 SMART SM00382 207 413 5.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_03430 e4c94c117ed10563dc001b980089287a 465 Pfam PF03060 Nitronate monooxygenase 131 461 2.0E-10 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 IM40_03430 e4c94c117ed10563dc001b980089287a 465 SUPERFAMILY SSF51412 187 308 4.27E-7 T 14-10-2018 IM40_03430 e4c94c117ed10563dc001b980089287a 465 Gene3D G3DSA:3.20.20.70 14 464 9.4E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IM40_03430 e4c94c117ed10563dc001b980089287a 465 SUPERFAMILY SSF51412 18 343 9.16E-5 T 14-10-2018 IM40_09375 2c00e1180e55af3281e7190600001d87 234 Gene3D G3DSA:1.10.443.10 45 232 2.7E-41 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IM40_09375 2c00e1180e55af3281e7190600001d87 234 Pfam PF00589 Phage integrase family 55 216 7.4E-33 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IM40_09375 2c00e1180e55af3281e7190600001d87 234 SUPERFAMILY SSF56349 47 225 1.56E-38 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 Pfam PF00529 HlyD membrane-fusion protein of T1SS 30 334 5.2E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 Gene3D G3DSA:1.10.287.470 80 181 1.0E-14 T 14-10-2018 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 SUPERFAMILY SSF111369 190 261 9.55E-9 T 14-10-2018 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 Gene3D G3DSA:2.40.30.170 226 343 2.0E-35 T 14-10-2018 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 Gene3D G3DSA:2.40.50.100 45 79 1.0E-14 T 14-10-2018 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 SUPERFAMILY SSF111369 45 174 6.8E-8 T 14-10-2018 IM40_00185 8ed1d6d93b15c013ecf2cf0fd913a6f3 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 287 1.3E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IM40_01620 395d719533e03ea3508c5730ca5243fd 159 Gene3D G3DSA:2.30.30.40 90 148 3.2E-9 T 14-10-2018 IM40_01620 395d719533e03ea3508c5730ca5243fd 159 Pfam PF06347 Bacterial SH3 domain 35 90 6.4E-15 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 IM40_01620 395d719533e03ea3508c5730ca5243fd 159 Pfam PF06347 Bacterial SH3 domain 105 151 7.0E-13 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 IM40_01620 395d719533e03ea3508c5730ca5243fd 159 Gene3D G3DSA:2.30.30.40 34 89 7.2E-7 T 14-10-2018 IM40_01620 395d719533e03ea3508c5730ca5243fd 159 SMART SM00287 92 153 5.5 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type IM40_01620 395d719533e03ea3508c5730ca5243fd 159 SMART SM00287 28 91 0.1 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type IM40_10880 d0ec69c218fe5137f82af7aa25339c7c 74 SUPERFAMILY SSF46689 5 73 1.65E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_10880 d0ec69c218fe5137f82af7aa25339c7c 74 Gene3D G3DSA:1.10.10.60 9 74 5.3E-11 T 14-10-2018 IM40_10880 d0ec69c218fe5137f82af7aa25339c7c 74 Pfam PF01527 Transposase 5 73 1.3E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_02330 4deca696c763b3091dce57cc0105aa48 189 Pfam PF05309 TraE protein 1 180 7.5E-49 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 IM40_02330 4deca696c763b3091dce57cc0105aa48 189 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 178 4.0E-38 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 IM40_06170 d7f32206380f10857589eeecfcc74178 702 Pfam PF05746 DALR anticodon binding domain 591 691 1.9E-6 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 IM40_06170 d7f32206380f10857589eeecfcc74178 702 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 698 23.202 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 698 3.2E-185 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 555 2.2E-192 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 SUPERFAMILY SSF109604 346 501 1.1E-15 T 14-10-2018 IM40_06170 d7f32206380f10857589eeecfcc74178 702 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 8.0E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 8.0E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 8.0E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 8.0E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_06170 d7f32206380f10857589eeecfcc74178 702 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 244 259 8.0E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IM40_07680 54ee7615d4d2b9654bc504b90713307e 344 SUPERFAMILY SSF52317 24 186 5.04E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like IM40_07680 54ee7615d4d2b9654bc504b90713307e 344 Pfam PF02016 LD-carboxypeptidase 34 321 3.1E-45 T 14-10-2018 IPR003507 Peptidase family S66 IM40_07680 54ee7615d4d2b9654bc504b90713307e 344 Gene3D G3DSA:3.50.30.60 191 326 1.6E-25 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily IM40_07680 54ee7615d4d2b9654bc504b90713307e 344 SUPERFAMILY SSF141986 169 324 4.84E-24 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily IM40_07680 54ee7615d4d2b9654bc504b90713307e 344 PIRSF PIRSF028757 22 332 1.3E-56 T 14-10-2018 IPR003507 Peptidase family S66 IM40_07680 54ee7615d4d2b9654bc504b90713307e 344 Gene3D G3DSA:3.40.50.10740 16 183 1.9E-22 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal IM40_04200 60800f977a2b18c03d193541effef290 302 Pfam PF13847 Methyltransferase domain 135 253 8.2E-13 T 14-10-2018 IPR025714 Methyltransferase domain IM40_04200 60800f977a2b18c03d193541effef290 302 SUPERFAMILY SSF53335 143 298 8.44E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_04200 60800f977a2b18c03d193541effef290 302 Gene3D G3DSA:3.40.50.150 16 301 7.4E-77 T 14-10-2018 IM40_10160 a3b3152fc35a6f6bde9095a3a78d21b5 102 SUPERFAMILY SSF142921 6 69 3.79E-6 T 14-10-2018 IPR036930 WGR domain superfamily IM40_10160 a3b3152fc35a6f6bde9095a3a78d21b5 102 Pfam PF05406 WGR domain 6 71 6.5E-5 T 14-10-2018 IPR008893 WGR domain IM40_00330 0c09a7c1f4bc21804e9e173f80fc050f 407 SUPERFAMILY SSF103473 3 392 9.55E-60 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_00330 0c09a7c1f4bc21804e9e173f80fc050f 407 Gene3D G3DSA:1.20.1720.10 11 389 1.6E-83 T 14-10-2018 IM40_00330 0c09a7c1f4bc21804e9e173f80fc050f 407 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 20 388 8.5E-69 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 IM40_00330 0c09a7c1f4bc21804e9e173f80fc050f 407 Pfam PF07690 Major Facilitator Superfamily 14 354 3.7E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_03320 01fed8527edc8c4705bc55dc9457e9ec 156 Pfam PF03477 ATP cone domain 50 134 2.6E-14 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 IM40_03320 01fed8527edc8c4705bc55dc9457e9ec 156 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 76.225 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 IM40_03320 01fed8527edc8c4705bc55dc9457e9ec 156 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 6.8E-50 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 IM40_03280 640ab4314fb46fd145a75fd0d77758e0 373 SUPERFAMILY SSF48452 122 256 7.78E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_03280 640ab4314fb46fd145a75fd0d77758e0 373 Gene3D G3DSA:1.25.40.10 78 370 2.1E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10870 233dd65e373c4409b3425d28865fdf30 402 Pfam PF07804 HipA-like C-terminal domain 138 376 2.5E-53 T 14-10-2018 IPR012893 HipA-like, C-terminal IM40_10870 233dd65e373c4409b3425d28865fdf30 402 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 109 3.2E-16 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 IM40_10870 233dd65e373c4409b3425d28865fdf30 402 Pfam PF13657 HipA N-terminal domain 5 109 7.7E-20 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 IM40_10870 233dd65e373c4409b3425d28865fdf30 402 Gene3D G3DSA:1.10.1070.20 239 328 1.6E-5 T 14-10-2018 IM40_10195 ae9bcb12bc107517cbba2c594a7e543a 404 Gene3D G3DSA:1.25.40.10 60 145 2.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10195 ae9bcb12bc107517cbba2c594a7e543a 404 SUPERFAMILY SSF81901 59 129 3.4E-9 T 14-10-2018 IM40_11425 f89b32e54701457bdb4f62657b8d3cc7 82 Gene3D G3DSA:2.10.260.10 4 43 1.4E-9 T 14-10-2018 IM40_11425 f89b32e54701457bdb4f62657b8d3cc7 82 SMART SM00966 5 50 2.3E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_11425 f89b32e54701457bdb4f62657b8d3cc7 82 SUPERFAMILY SSF89447 6 52 8.2E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily IM40_11425 f89b32e54701457bdb4f62657b8d3cc7 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 13 45 9.6E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_11425 f89b32e54701457bdb4f62657b8d3cc7 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 42 9.1E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_09260 98f094d87bb7a030ba16fc3bb765d1f7 318 Pfam PF03524 Conjugal transfer protein 97 310 1.6E-33 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX IM40_09260 98f094d87bb7a030ba16fc3bb765d1f7 318 Gene3D G3DSA:2.60.40.2500 213 317 1.1E-11 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily IM40_11210 98f094d87bb7a030ba16fc3bb765d1f7 318 Pfam PF03524 Conjugal transfer protein 97 310 1.6E-33 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX IM40_11210 98f094d87bb7a030ba16fc3bb765d1f7 318 Gene3D G3DSA:2.60.40.2500 213 317 1.1E-11 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily IM40_10280 1f91604fd8775d7dd784201a73dcbcfb 260 SUPERFAMILY SSF52047 103 249 2.51E-14 T 14-10-2018 IM40_10280 1f91604fd8775d7dd784201a73dcbcfb 260 SMART SM00256 44 82 9.8E-5 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_10280 1f91604fd8775d7dd784201a73dcbcfb 260 Gene3D G3DSA:1.20.1280.50 13 78 1.0E-9 T 14-10-2018 IM40_10280 1f91604fd8775d7dd784201a73dcbcfb 260 Pfam PF12937 F-box-like 42 81 1.2E-8 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_10280 1f91604fd8775d7dd784201a73dcbcfb 260 SUPERFAMILY SSF81383 33 94 3.01E-10 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_10280 1f91604fd8775d7dd784201a73dcbcfb 260 Gene3D G3DSA:3.80.10.10 79 257 2.2E-14 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_01980 0348c447a476771d9aebd26857f813cf 230 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 17 226 5.5E-65 T 14-10-2018 IPR006214 Bax inhibitor 1-related IM40_09570 a129d8e62d0660e8b6b973ea7a03d702 380 Pfam PF17482 Phage tail sheath C-terminal domain 269 367 3.6E-13 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain IM40_09570 a129d8e62d0660e8b6b973ea7a03d702 380 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 119 267 4.8E-13 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain IM40_06650 967507373fc08112243f65a0ab8b9d54 443 SUPERFAMILY SSF56112 84 325 2.79E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_06650 967507373fc08112243f65a0ab8b9d54 443 Pfam PF03109 ABC1 family 102 216 8.3E-25 T 14-10-2018 IPR004147 UbiB domain IM40_08765 3a4bdfd4346bd29ad3486e99d44afd6a 238 Gene3D G3DSA:3.20.20.410 1 238 2.5E-67 T 14-10-2018 IPR036520 UPF0759 superfamily IM40_08765 3a4bdfd4346bd29ad3486e99d44afd6a 238 Pfam PF01904 Protein of unknown function DUF72 22 234 1.2E-52 T 14-10-2018 IPR002763 Protein of unknown function DUF72 IM40_08765 3a4bdfd4346bd29ad3486e99d44afd6a 238 SUPERFAMILY SSF117396 4 237 1.7E-70 T 14-10-2018 IPR036520 UPF0759 superfamily IM40_07375 d5f21fb03a9b3d1bd31f0c495c8271cf 125 Pfam PF01381 Helix-turn-helix 9 64 7.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_07375 d5f21fb03a9b3d1bd31f0c495c8271cf 125 SUPERFAMILY SSF47413 5 68 2.25E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_07375 d5f21fb03a9b3d1bd31f0c495c8271cf 125 Gene3D G3DSA:1.10.260.40 2 74 4.6E-12 T 14-10-2018 IM40_07375 d5f21fb03a9b3d1bd31f0c495c8271cf 125 SMART SM00530 8 64 2.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_01965 a8ad2680dcd5e04f7d3857890795b394 247 Pfam PF00005 ABC transporter 22 169 8.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_01965 a8ad2680dcd5e04f7d3857890795b394 247 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_01965 a8ad2680dcd5e04f7d3857890795b394 247 Gene3D G3DSA:3.40.50.300 3 246 3.4E-62 T 14-10-2018 IM40_01965 a8ad2680dcd5e04f7d3857890795b394 247 SUPERFAMILY SSF52540 4 228 3.91E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01965 a8ad2680dcd5e04f7d3857890795b394 247 SMART SM00382 30 217 7.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_08745 5565d7833e0aee06458750d47cb8f75e 252 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 21 57 8.4E-13 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative IM40_08745 5565d7833e0aee06458750d47cb8f75e 252 Pfam PF13717 zinc-ribbon domain 21 55 1.8E-12 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative IM40_00360 00e4d81debc7018b59d14845bd1e8546 223 Pfam PF03379 CcmB protein 19 196 8.5E-17 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 IM40_00360 00e4d81debc7018b59d14845bd1e8546 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 2.1E-9 T 14-10-2018 IM40_00360 00e4d81debc7018b59d14845bd1e8546 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 2.1E-9 T 14-10-2018 IM40_00360 00e4d81debc7018b59d14845bd1e8546 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 2.1E-9 T 14-10-2018 IM40_00360 00e4d81debc7018b59d14845bd1e8546 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 2.1E-9 T 14-10-2018 IM40_03725 e39e5c45557f2cbc54ca5242e767d5ee 154 Pfam PF10116 Protein required for attachment to host cells 16 147 4.4E-17 T 14-10-2018 IPR019291 Host attachment protein IM40_03945 30416bb92fb58b24a0e395cd5aef4848 92 Gene3D G3DSA:3.80.10.10 1 89 2.8E-10 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_03945 30416bb92fb58b24a0e395cd5aef4848 92 SUPERFAMILY SSF52047 2 74 4.32E-10 T 14-10-2018 IM40_09825 d0b1ab545aa0f070f4528545142c5098 1487 SUPERFAMILY SSF52540 379 565 4.2E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09825 d0b1ab545aa0f070f4528545142c5098 1487 Gene3D G3DSA:3.40.50.300 331 496 2.0E-19 T 14-10-2018 IM40_09825 d0b1ab545aa0f070f4528545142c5098 1487 Pfam PF00931 NB-ARC domain 381 554 2.7E-7 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 IM40_09825 d0b1ab545aa0f070f4528545142c5098 1487 PRINTS PR00364 Disease resistance protein signature 384 399 2.7E-5 T 14-10-2018 IM40_09825 d0b1ab545aa0f070f4528545142c5098 1487 PRINTS PR00364 Disease resistance protein signature 541 555 2.7E-5 T 14-10-2018 IM40_09825 d0b1ab545aa0f070f4528545142c5098 1487 PRINTS PR00364 Disease resistance protein signature 458 472 2.7E-5 T 14-10-2018 IM40_01240 43182c6772f2d71760fc76faaf54e91e 360 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 32 215 1.1E-17 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 SMART SM00448 5 116 7.1E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 Gene3D G3DSA:3.40.50.12740 4 137 4.0E-40 T 14-10-2018 IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 Pfam PF00072 Response regulator receiver domain 8 116 4.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 4.5E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 SUPERFAMILY SSF52172 6 169 6.55E-38 T 14-10-2018 IPR011006 CheY-like superfamily IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 Gene3D G3DSA:1.10.10.10 138 227 6.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06315 2a9707ca971712dc80f0b4f4ce1f59fc 229 SMART SM00862 151 224 5.9E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IM40_02455 9a43e8610d4d0b3801728d88a1a37c56 219 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 11 211 4.1E-33 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 IM40_02455 9a43e8610d4d0b3801728d88a1a37c56 219 Pfam PF02592 Putative vitamin uptake transporter 43 204 1.4E-33 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 IM40_02455 9a43e8610d4d0b3801728d88a1a37c56 219 Hamap MF_02088 Probable queuosine precursor transporter. 5 217 14.141 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 IM40_10005 7d84cc0048d82054be22c0c27cfb2b83 419 Gene3D G3DSA:3.30.300.180 337 414 3.5E-10 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily IM40_10005 7d84cc0048d82054be22c0c27cfb2b83 419 Pfam PF11638 DnaA N-terminal domain 342 403 3.0E-10 T 14-10-2018 IPR024633 DnaA N-terminal domain IM40_09820 08b5625dea09db0abff1005419e6f08a 492 SUPERFAMILY SSF52151 118 445 1.23E-34 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IM40_09820 08b5625dea09db0abff1005419e6f08a 492 Pfam PF01734 Patatin-like phospholipase 120 339 7.9E-17 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IM40_09820 08b5625dea09db0abff1005419e6f08a 492 Gene3D G3DSA:3.40.1090.10 110 461 2.0E-61 T 14-10-2018 IM40_03480 e084913421587d0d866c6bc5484bb36d 265 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 118 222 7.5E-20 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain IM40_03480 e084913421587d0d866c6bc5484bb36d 265 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 260 3.0E-44 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB IM40_00290 99c8f0a712d0929d499acbbc85dba3d1 210 Pfam PF01612 3'-5' exonuclease 23 175 2.2E-37 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IM40_00290 99c8f0a712d0929d499acbbc85dba3d1 210 Gene3D G3DSA:3.30.420.10 6 192 3.9E-41 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_00290 99c8f0a712d0929d499acbbc85dba3d1 210 SUPERFAMILY SSF53098 23 195 7.59E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_00290 99c8f0a712d0929d499acbbc85dba3d1 210 SMART SM00474 7 176 2.6E-33 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IM40_07825 96c3bd5c5df00c74ee13d6a58e2c8eff 213 Gene3D G3DSA:1.10.260.40 5 87 2.0E-8 T 14-10-2018 IM40_07825 96c3bd5c5df00c74ee13d6a58e2c8eff 213 SUPERFAMILY SSF47413 10 62 4.56E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_03550 46c2675abf613de3cf924ebb947890e3 150 Pfam PF14328 Domain of unknown function (DUF4385) 11 147 2.1E-58 T 14-10-2018 IPR025494 Protein of unknown function DUF4385 IM40_11130 5d46613cf1376eda6d231716f3c5790e 315 Pfam PF13612 Transposase DDE domain 156 220 1.1E-6 T 14-10-2018 IPR025668 Transposase DDE domain IM40_11130 5d46613cf1376eda6d231716f3c5790e 315 Pfam PF13737 Transposase DDE domain 26 137 2.1E-30 T 14-10-2018 IPR025668 Transposase DDE domain IM40_10340 e18455e2c493d5ac1893b6c709061017 1313 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 992 1004 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 IM40_10340 e18455e2c493d5ac1893b6c709061017 1313 SMART SM00220 842 1150 1.2E-10 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IM40_10340 e18455e2c493d5ac1893b6c709061017 1313 Gene3D G3DSA:1.10.510.10 830 1163 5.6E-25 T 14-10-2018 IM40_10340 e18455e2c493d5ac1893b6c709061017 1313 SUPERFAMILY SSF56112 847 1146 1.48E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_10340 e18455e2c493d5ac1893b6c709061017 1313 Pfam PF00069 Protein kinase domain 844 1146 2.2E-22 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IM40_00120 8e77a3779a455e3ecda03090be64cc66 602 SUPERFAMILY SSF63825 89 339 4.97E-23 T 14-10-2018 IM40_00120 8e77a3779a455e3ecda03090be64cc66 602 Gene3D G3DSA:2.120.10.30 114 359 2.9E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IM40_07800 6f861f4c780a672fbbb302da4f412504 533 Gene3D G3DSA:3.30.565.10 369 463 3.9E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_07800 6f861f4c780a672fbbb302da4f412504 533 SUPERFAMILY SSF55874 372 458 4.75E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SUPERFAMILY SSF63825 40 266 4.18E-8 T 14-10-2018 IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF03797 Autotransporter beta-domain 2578 2830 6.9E-49 T 14-10-2018 IPR005546 Autotransporter beta-domain IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SMART SM00869 2575 2840 1.9E-39 T 14-10-2018 IPR005546 Autotransporter beta-domain IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Gene3D G3DSA:2.40.128.130 2551 2850 3.6E-57 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Gene3D G3DSA:2.120.10.30 27 177 5.1E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1197 1226 1.8E-7 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 948 977 2.5E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1302 1332 5.0E-6 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1589 1618 7.9E-10 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2259 2287 6.4E-7 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SUPERFAMILY SSF103515 2561 2850 5.49E-47 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SUPERFAMILY SSF51126 1279 1651 1.88E-13 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 948 977 1.4E-9 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 1303 1330 0.0021 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 2171 2195 0.0075 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 1400 1420 0.14 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 1590 1618 8.2E-7 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 1493 1515 0.067 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 1197 1225 2.9E-6 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 Pfam PF12951 Passenger-associated-transport-repeat 2259 2286 6.1E-5 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SUPERFAMILY SSF51126 925 1269 4.71E-17 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SUPERFAMILY SSF51126 2023 2369 1.76E-18 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor IM40_03870 7081ad931e9d9a6cbba8ce66f120bae0 2850 SUPERFAMILY SSF51126 1564 2046 1.35E-7 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 Pfam PF01230 HIT domain 14 111 1.6E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 PRINTS PR00332 Histidine triad family signature 8 24 2.5E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 PRINTS PR00332 Histidine triad family signature 98 108 2.5E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 PRINTS PR00332 Histidine triad family signature 29 47 2.5E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 SUPERFAMILY SSF54197 3 114 2.01E-27 T 14-10-2018 IPR036265 HIT-like superfamily IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 Gene3D G3DSA:3.30.428.10 7 113 2.6E-27 T 14-10-2018 IPR036265 HIT-like superfamily IM40_09110 a4ed5134df68e012ba476d34eb0d1f98 121 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 14-10-2018 IPR019808 Histidine triad, conserved site IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 4.1E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 4.1E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 4.1E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 4.1E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 4.1E-49 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 Pfam PF00361 Proton-conducting membrane transporter 134 421 5.9E-86 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 47 128 4.5E-5 T 14-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_05300 da45d0e284ce9b9a6d625b25f321de4e 499 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 486 6.5E-181 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_00130 726694a24cf2589d9bae66c8225bb849 563 Gene3D G3DSA:2.40.10.500 234 309 1.4E-5 T 14-10-2018 IM40_00130 726694a24cf2589d9bae66c8225bb849 563 SUPERFAMILY SSF63829 54 303 6.34E-27 T 14-10-2018 IM40_00130 726694a24cf2589d9bae66c8225bb849 563 Gene3D G3DSA:2.120.10.30 84 233 6.4E-13 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IM40_06565 77df3496d5c631279c9168dacb3cd180 336 SUPERFAMILY SSF53474 5 319 1.42E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_06565 77df3496d5c631279c9168dacb3cd180 336 Pfam PF00756 Putative esterase 36 173 3.9E-14 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 IM40_03960 d36d3e5ae988d9f5e019913884739278 276 Pfam PF12706 Beta-lactamase superfamily domain 40 241 1.6E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase IM40_03960 d36d3e5ae988d9f5e019913884739278 276 SUPERFAMILY SSF56281 5 275 4.06E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_03960 d36d3e5ae988d9f5e019913884739278 276 Gene3D G3DSA:3.60.15.10 5 276 2.0E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_04075 db1c48a9384935efe58397b24aef2d08 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 263 3.6E-107 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 IM40_04075 db1c48a9384935efe58397b24aef2d08 294 Gene3D G3DSA:3.90.550.10 1 288 9.0E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04075 db1c48a9384935efe58397b24aef2d08 294 SUPERFAMILY SSF53448 5 275 5.01E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04075 db1c48a9384935efe58397b24aef2d08 294 Pfam PF00483 Nucleotidyl transferase 12 264 3.3E-29 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 Pfam PF00005 ABC transporter 361 509 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 SUPERFAMILY SSF52540 337 579 3.06E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 SUPERFAMILY SSF90123 11 494 6.54E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 Pfam PF00664 ABC transporter transmembrane region 33 290 3.8E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 SMART SM00382 369 555 3.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 Gene3D G3DSA:1.20.1560.10 3 331 1.9E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IM40_01290 8b37ca7ae2d0869d47d67d5733306963 591 Gene3D G3DSA:3.40.50.300 334 582 4.0E-92 T 14-10-2018 IM40_02280 2b9a4714adc1c9f7d82db113df88b4fb 326 Pfam PF06834 TraU protein 24 325 1.0E-115 T 14-10-2018 IPR009649 TraU IM40_04405 d7432faa3cbce182af725e0832e69c3a 260 Gene3D G3DSA:3.90.550.10 7 255 9.3E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IM40_04405 d7432faa3cbce182af725e0832e69c3a 260 Pfam PF02348 Cytidylyltransferase 11 222 1.8E-46 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 IM40_04405 d7432faa3cbce182af725e0832e69c3a 260 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 9 241 2.8E-58 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 IM40_04405 d7432faa3cbce182af725e0832e69c3a 260 SUPERFAMILY SSF53448 10 243 5.18E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IM40_00735 5358e9135f9bd37d6a942a42c8d4a060 336 SUPERFAMILY SSF103481 208 281 1.02E-7 T 14-10-2018 IM40_00735 5358e9135f9bd37d6a942a42c8d4a060 336 Pfam PF00892 EamA-like transporter family 143 281 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_00735 5358e9135f9bd37d6a942a42c8d4a060 336 Pfam PF00892 EamA-like transporter family 7 130 1.3E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_00735 5358e9135f9bd37d6a942a42c8d4a060 336 SUPERFAMILY SSF103481 40 132 1.22E-6 T 14-10-2018 IM40_00725 72d145dbe59566ab72e5561dc910bbdf 153 SUPERFAMILY SSF47240 10 145 1.01E-15 T 14-10-2018 IPR009078 Ferritin-like superfamily IM40_00725 72d145dbe59566ab72e5561dc910bbdf 153 Pfam PF09537 Domain of unknown function (DUF2383) 13 115 2.6E-11 T 14-10-2018 IPR019052 Domain of unknown function DUF2383 IM40_00725 72d145dbe59566ab72e5561dc910bbdf 153 Gene3D G3DSA:1.20.1260.10 7 146 9.4E-11 T 14-10-2018 IPR012347 Ferritin-like IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.4E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.4E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.4E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 SUPERFAMILY SSF54999 6 102 1.57E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.3E-37 T 14-10-2018 IPR027486 Ribosomal protein S10 domain IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 SMART SM01403 7 101 5.7E-58 T 14-10-2018 IPR027486 Ribosomal protein S10 domain IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.3E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.848 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02015 6a8386e225ae8f017a2649fd6c03fa14 102 Gene3D G3DSA:3.30.70.600 1 102 2.1E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily IM40_00355 f1dabda6e6eaf6a67db0c092c3a6c98e 63 SUPERFAMILY SSF158997 7 61 2.09E-19 T 14-10-2018 IM40_00355 f1dabda6e6eaf6a67db0c092c3a6c98e 63 Pfam PF03966 Trm112p-like protein 9 48 2.9E-8 T 14-10-2018 IPR005651 Trm112-like IM40_00355 f1dabda6e6eaf6a67db0c092c3a6c98e 63 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 8 61 25.261 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 IM40_00355 f1dabda6e6eaf6a67db0c092c3a6c98e 63 Gene3D G3DSA:2.20.25.10 15 63 1.6E-20 T 14-10-2018 IM40_06990 45195149cb0043ce0b44443148e6be51 296 Pfam PF12937 F-box-like 43 83 1.6E-5 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_06990 45195149cb0043ce0b44443148e6be51 296 SUPERFAMILY SSF81383 28 86 1.57E-11 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_06990 45195149cb0043ce0b44443148e6be51 296 Gene3D G3DSA:1.20.1280.50 27 148 5.2E-11 T 14-10-2018 IM40_06990 45195149cb0043ce0b44443148e6be51 296 SMART SM00256 42 82 1.9E-5 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_03000 4a255627d2d08752793054507213415b 179 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 37 172 1.6E-36 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 IM40_02735 0ce4fb8fccff0373d683a3b246365e4b 208 SUPERFAMILY SSF81901 99 170 5.1E-7 T 14-10-2018 IM40_02735 0ce4fb8fccff0373d683a3b246365e4b 208 Gene3D G3DSA:1.25.40.10 50 203 2.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_00860 297453f4eb80797d96c9ec9a8671df60 300 Gene3D G3DSA:3.40.50.1980 23 185 2.0E-42 T 14-10-2018 IM40_00860 297453f4eb80797d96c9ec9a8671df60 300 Gene3D G3DSA:3.40.50.1980 186 299 2.9E-33 T 14-10-2018 IM40_00860 297453f4eb80797d96c9ec9a8671df60 300 Pfam PF01297 Zinc-uptake complex component A periplasmic 24 292 1.8E-55 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 IM40_00860 297453f4eb80797d96c9ec9a8671df60 300 SUPERFAMILY SSF53807 22 298 4.37E-68 T 14-10-2018 IM40_03330 a3d53b9f20d775a683fd44721fafce30 145 SUPERFAMILY SSF101738 1 107 4.32E-37 T 14-10-2018 IPR036760 SspB-like superfamily IM40_03330 a3d53b9f20d775a683fd44721fafce30 145 Pfam PF04386 Stringent starvation protein B 2 129 4.5E-42 T 14-10-2018 IPR007481 Stringent starvation protein B IM40_03330 a3d53b9f20d775a683fd44721fafce30 145 Gene3D G3DSA:2.30.30.220 1 108 8.4E-45 T 14-10-2018 IPR036760 SspB-like superfamily IM40_02605 39465a2b11711121d0c63d2bbd5ee79d 171 Pfam PF01764 Lipase (class 3) 95 169 9.9E-8 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 IM40_02605 39465a2b11711121d0c63d2bbd5ee79d 171 SUPERFAMILY SSF53474 36 169 3.48E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_02605 39465a2b11711121d0c63d2bbd5ee79d 171 Gene3D G3DSA:3.40.50.1820 38 171 7.0E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_05615 9e8452aecd82d0750d6d476f19c56159 147 PIRSF PIRSF006806 1 140 4.6E-33 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase IM40_05615 9e8452aecd82d0750d6d476f19c56159 147 Gene3D G3DSA:3.40.50.10420 1 146 4.0E-38 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IM40_05615 9e8452aecd82d0750d6d476f19c56159 147 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 137 9.1E-39 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase IM40_05615 9e8452aecd82d0750d6d476f19c56159 147 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 137 4.6E-32 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase IM40_05615 9e8452aecd82d0750d6d476f19c56159 147 SUPERFAMILY SSF100950 2 143 3.63E-41 T 14-10-2018 IPR037171 NagB/RpiA transferase-like IM40_01550 f213a855bd64202aed245f1a03662f2e 232 SUPERFAMILY SSF51182 1 229 1.76E-66 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily IM40_01550 f213a855bd64202aed245f1a03662f2e 232 Gene3D G3DSA:2.60.120.10 8 229 5.7E-82 T 14-10-2018 IPR014710 RmlC-like jelly roll fold IM40_01550 f213a855bd64202aed245f1a03662f2e 232 Gene3D G3DSA:2.60.120.10 11 135 5.7E-82 T 14-10-2018 IPR014710 RmlC-like jelly roll fold IM40_01550 f213a855bd64202aed245f1a03662f2e 232 PIRSF PIRSF006232 2 232 1.9E-46 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 IM40_01550 f213a855bd64202aed245f1a03662f2e 232 Pfam PF02678 Pirin 10 119 2.3E-34 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 IM40_00105 cb4492614936db755eda1a96a7c0706d 102 Pfam PF02325 YGGT family 14 91 3.6E-22 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.6E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 SMART SM01374 1 122 1.2E-82 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.48 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 SUPERFAMILY SSF50193 1 122 4.58E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 Gene3D G3DSA:2.40.150.20 1 122 2.7E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.7E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 IM40_02070 c71b5acaa3ed944120faba01239a5af7 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_01055 1aa8bbbe9e40ab19d787e41ca7606b6b 241 Pfam PF13610 DDE domain 73 212 1.5E-49 T 14-10-2018 IPR032874 DDE domain IM40_01055 1aa8bbbe9e40ab19d787e41ca7606b6b 241 SUPERFAMILY SSF53098 70 191 4.36E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_02580 a9237ebab999f0e5e95d6ce233011191 469 Pfam PF00854 POT family 96 431 4.5E-25 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 IM40_02580 a9237ebab999f0e5e95d6ce233011191 469 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 464 1.3E-45 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 IM40_02580 a9237ebab999f0e5e95d6ce233011191 469 SUPERFAMILY SSF103473 6 464 2.22E-18 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_02580 a9237ebab999f0e5e95d6ce233011191 469 Gene3D G3DSA:1.20.1250.20 5 467 1.9E-79 T 14-10-2018 IM40_05060 442e3f9c9b34adeecef5305ad10d7ccc 341 Gene3D G3DSA:3.40.50.12710 1 341 8.9E-93 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 IM40_05060 442e3f9c9b34adeecef5305ad10d7ccc 341 SUPERFAMILY SSF53335 3 338 7.18E-95 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_05060 442e3f9c9b34adeecef5305ad10d7ccc 341 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 52 275 1.2E-54 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 IM40_00085 7d81a4e45124c03930c2438545274599 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 25 379 3.9E-109 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase IM40_00085 7d81a4e45124c03930c2438545274599 386 SUPERFAMILY SSF53383 23 384 7.32E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_00085 7d81a4e45124c03930c2438545274599 386 Gene3D G3DSA:3.90.1150.10 263 385 7.9E-33 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_00085 7d81a4e45124c03930c2438545274599 386 PIRSF PIRSF000390 9 386 2.8E-99 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase IM40_00085 7d81a4e45124c03930c2438545274599 386 Gene3D G3DSA:3.40.640.10 6 261 7.0E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_08130 ea2996772ed1a45a5cee56afcb2e9eb0 73 Gene3D G3DSA:1.10.10.10 1 73 1.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_08130 ea2996772ed1a45a5cee56afcb2e9eb0 73 SUPERFAMILY SSF46785 1 71 2.52E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_08130 ea2996772ed1a45a5cee56afcb2e9eb0 73 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 59 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 Gene3D G3DSA:1.20.1260.10 5 161 2.1E-58 T 14-10-2018 IPR012347 Ferritin-like IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 1.5E-5 T 14-10-2018 IPR002177 DNA-binding protein Dps IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 34 50 1.5E-5 T 14-10-2018 IPR002177 DNA-binding protein Dps IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 ProSitePatterns PS00819 Dps protein family signature 2. 60 74 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 SUPERFAMILY SSF47240 12 160 1.37E-33 T 14-10-2018 IPR009078 Ferritin-like superfamily IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 Pfam PF00210 Ferritin-like domain 14 160 3.0E-21 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 IM40_03415 fbb5a0551e2b923ffd8c881c73cf5921 162 PIRSF PIRSF005900 8 161 6.8E-40 T 14-10-2018 IPR002177 DNA-binding protein Dps IM40_03295 85a7d257c5aebc0b9c549d18f429f0ab 319 Gene3D G3DSA:3.40.50.2000 162 319 9.5E-31 T 14-10-2018 IM40_03295 85a7d257c5aebc0b9c549d18f429f0ab 319 Gene3D G3DSA:3.40.50.2000 4 155 6.6E-16 T 14-10-2018 IM40_03295 85a7d257c5aebc0b9c549d18f429f0ab 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 301 2.8E-24 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 IM40_03295 85a7d257c5aebc0b9c549d18f429f0ab 319 SUPERFAMILY SSF53756 9 316 6.59E-59 T 14-10-2018 IM40_08080 a16de5a8aa188a2f5facb9c171de2c6d 478 Pfam PF01637 ATPase domain predominantly from Archaea 4 212 1.0E-9 T 14-10-2018 IPR011579 ATPase domain GO:0005524 IM40_08080 a16de5a8aa188a2f5facb9c171de2c6d 478 SUPERFAMILY SSF52540 3 246 4.81E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_08080 a16de5a8aa188a2f5facb9c171de2c6d 478 Gene3D G3DSA:3.40.50.300 1 172 2.3E-20 T 14-10-2018 IM40_07465 f6404deea013e195ca5cc346444ee5a2 163 Pfam PF11019 Protein of unknown function (DUF2608) 1 148 4.8E-12 T 14-10-2018 IPR022565 Protein of unknown function DUF2608 IM40_07465 f6404deea013e195ca5cc346444ee5a2 163 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 6 162 5.0E-4 T 14-10-2018 IM40_08870 26e6ef26114034a130336ffeaaf8df69 230 SUPERFAMILY SSF82185 109 226 2.35E-21 T 14-10-2018 IM40_08870 26e6ef26114034a130336ffeaaf8df69 230 Gene3D G3DSA:3.90.930.1 3 97 9.6E-9 T 14-10-2018 IM40_08870 26e6ef26114034a130336ffeaaf8df69 230 Gene3D G3DSA:3.90.930.1 98 193 8.9E-14 T 14-10-2018 IM40_08870 26e6ef26114034a130336ffeaaf8df69 230 Pfam PF07661 MORN repeat variant 164 183 0.0064 T 14-10-2018 IPR011652 MORN variant IM40_08870 26e6ef26114034a130336ffeaaf8df69 230 Pfam PF07661 MORN repeat variant 188 208 0.14 T 14-10-2018 IPR011652 MORN variant IM40_08870 26e6ef26114034a130336ffeaaf8df69 230 SUPERFAMILY SSF82185 29 130 4.45E-17 T 14-10-2018 IM40_02985 d9789f618c6229139a53af0e8422d981 125 Pfam PF01850 PIN domain 3 119 1.6E-13 T 14-10-2018 IPR002716 PIN domain IM40_02985 d9789f618c6229139a53af0e8422d981 125 SUPERFAMILY SSF88723 3 123 1.35E-17 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_02985 d9789f618c6229139a53af0e8422d981 125 Gene3D G3DSA:3.40.50.1010 1 122 1.6E-10 T 14-10-2018 IM40_10975 92da3b157276b9568dd974cf4db6ab68 141 Gene3D G3DSA:2.10.109.10 27 140 7.1E-34 T 14-10-2018 IM40_10975 92da3b157276b9568dd974cf4db6ab68 141 Pfam PF00717 Peptidase S24-like 59 120 8.5E-6 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_10975 92da3b157276b9568dd974cf4db6ab68 141 SUPERFAMILY SSF51306 16 139 1.92E-21 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_03345 d6c0edc6e5d7eb82d0e10b081ae041e7 154 Pfam PF00293 NUDIX domain 13 131 9.8E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IM40_03345 d6c0edc6e5d7eb82d0e10b081ae041e7 154 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.3E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IM40_03345 d6c0edc6e5d7eb82d0e10b081ae041e7 154 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.3E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IM40_03345 d6c0edc6e5d7eb82d0e10b081ae041e7 154 SUPERFAMILY SSF55811 5 142 2.57E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IM40_03345 d6c0edc6e5d7eb82d0e10b081ae041e7 154 Gene3D G3DSA:3.90.79.10 1 148 1.2E-27 T 14-10-2018 IM40_03345 d6c0edc6e5d7eb82d0e10b081ae041e7 154 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IM40_01805 b6f771932262aad816c22bcd42867b96 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 2.5E-87 T 14-10-2018 IM40_01805 b6f771932262aad816c22bcd42867b96 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01805 b6f771932262aad816c22bcd42867b96 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01805 b6f771932262aad816c22bcd42867b96 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01805 b6f771932262aad816c22bcd42867b96 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01805 b6f771932262aad816c22bcd42867b96 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IM40_01805 b6f771932262aad816c22bcd42867b96 274 SUPERFAMILY SSF51735 9 257 1.85E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily IM40_01805 b6f771932262aad816c22bcd42867b96 274 Gene3D G3DSA:3.40.50.720 4 274 1.5E-58 T 14-10-2018 IM40_01805 b6f771932262aad816c22bcd42867b96 274 PIRSF PIRSF000094 4 262 6.3E-114 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IM40_07925 d775e2cacb75a4899491b935a93d42f4 602 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 293 535 1.2E-69 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN IM40_10250 3ff8bcd7bd8672bc881e56d4449e893a 206 SUPERFAMILY SSF52058 98 175 3.4E-6 T 14-10-2018 IM40_10250 3ff8bcd7bd8672bc881e56d4449e893a 206 Gene3D G3DSA:3.80.10.10 30 194 3.8E-13 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_06145 8d7048218d43706657407bb31f52d227 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 68.039 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 IM40_06145 8d7048218d43706657407bb31f52d227 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 152 2.2E-51 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 IM40_06145 8d7048218d43706657407bb31f52d227 155 Pfam PF01668 SmpB protein 10 153 1.4E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 IM40_06145 8d7048218d43706657407bb31f52d227 155 SUPERFAMILY SSF74982 4 134 1.57E-46 T 14-10-2018 IPR023620 Small protein B IM40_06145 8d7048218d43706657407bb31f52d227 155 Gene3D G3DSA:2.40.280.10 2 131 3.7E-47 T 14-10-2018 IPR023620 Small protein B IM40_06145 8d7048218d43706657407bb31f52d227 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 134 1.0E-41 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 IM40_06145 8d7048218d43706657407bb31f52d227 155 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site IM40_11415 958b5fd82463bd4e92f41ea8f541a85d 191 Gene3D G3DSA:1.25.40.10 22 188 3.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_11415 958b5fd82463bd4e92f41ea8f541a85d 191 SUPERFAMILY SSF81901 44 144 4.58E-6 T 14-10-2018 IM40_00220 01193119fad6d965608b0e00a6a7753d 264 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 43 211 2.0E-47 T 14-10-2018 IPR003734 Domain of unknown function DUF155 IM40_01110 d45bb343194c01f27b01364ffb7e556e 417 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 208 413 1.7E-67 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 IM40_01110 d45bb343194c01f27b01364ffb7e556e 417 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.7E-17 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 IM40_02085 ecf1089448accc692b0828c189590d69 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.6E-22 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IM40_02085 ecf1089448accc692b0828c189590d69 101 Gene3D G3DSA:4.10.830.10 43 101 2.5E-21 T 14-10-2018 IM40_02085 ecf1089448accc692b0828c189590d69 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.231 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid IM40_02085 ecf1089448accc692b0828c189590d69 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IM40_02085 ecf1089448accc692b0828c189590d69 101 SUPERFAMILY SSF57716 2 101 8.08E-34 T 14-10-2018 IM40_02270 6b56aa09f6a3ec5b7f481b6d60e96f46 602 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 293 535 7.4E-69 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN IM40_05260 72e69d30ff5729333e6f764b74a1cbc5 276 Pfam PF02698 DUF218 domain 98 258 1.1E-25 T 14-10-2018 IPR003848 Domain of unknown function DUF218 IM40_05260 72e69d30ff5729333e6f764b74a1cbc5 276 Gene3D G3DSA:3.40.50.620 119 226 4.8E-7 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_08335 36347fcafd3d0730bfe76c288a4888d8 134 Pfam PF01850 PIN domain 10 122 3.9E-9 T 14-10-2018 IPR002716 PIN domain IM40_08335 36347fcafd3d0730bfe76c288a4888d8 134 SUPERFAMILY SSF88723 9 125 1.07E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily IM40_08335 36347fcafd3d0730bfe76c288a4888d8 134 Gene3D G3DSA:3.40.50.1010 10 131 5.6E-19 T 14-10-2018 IM40_10665 e3ce05da35be7e75b6fecd8062891cfb 79 SUPERFAMILY SSF47598 1 41 1.19E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 Gene3D G3DSA:1.10.10.10 1 89 9.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 Gene3D G3DSA:3.40.190.290 90 293 3.8E-39 T 14-10-2018 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 SUPERFAMILY SSF53850 88 297 5.19E-32 T 14-10-2018 IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 SUPERFAMILY SSF46785 1 111 1.98E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IM40_06490 806c1ea1c18072b9ebb6a6951e3f52d1 300 Pfam PF03466 LysR substrate binding domain 88 293 2.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding IM40_01795 33efd663df3a14ec066e313cae5e806e 311 Pfam PF10150 Ribonuclease E/G family 115 295 2.3E-23 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 IM40_03590 c2ceceeb417458e06a5bd0780b913b5d 176 Pfam PF11181 Heat induced stress protein YflT 14 149 4.1E-7 T 14-10-2018 IPR025889 General stress protein 17M-like domain IM40_11095 7128b6e441e7cb73fa921bd06c470323 57 Pfam PF04070 Domain of unknown function (DUF378) 1 50 3.3E-22 T 14-10-2018 IPR007211 Protein of unknown function DUF378 IM40_05640 40cce74856f928e5e5bc83709ebbe6db 208 SUPERFAMILY SSF53098 9 204 9.26E-61 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_05640 40cce74856f928e5e5bc83709ebbe6db 208 Gene3D G3DSA:3.30.420.10 3 207 4.4E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_05640 40cce74856f928e5e5bc83709ebbe6db 208 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 199 34.187 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 IM40_05640 40cce74856f928e5e5bc83709ebbe6db 208 Pfam PF01351 Ribonuclease HII 15 197 1.9E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain IM40_09745 7a7ff92a1d85faa93553fe5cd7e55939 392 Pfam PF13700 Domain of unknown function (DUF4158) 2 170 1.0E-32 T 14-10-2018 IPR025296 Domain of unknown function DUF4158 IM40_03675 876c6b471b429e70c72a943fb879e6aa 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.4E-137 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 IM40_03675 876c6b471b429e70c72a943fb879e6aa 555 SUPERFAMILY SSF52540 1 505 1.36E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_03675 876c6b471b429e70c72a943fb879e6aa 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 499 4.6E-21 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal IM40_03675 876c6b471b429e70c72a943fb879e6aa 555 PIRSF PIRSF003128 1 554 4.0E-152 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 IM40_03675 876c6b471b429e70c72a943fb879e6aa 555 Gene3D G3DSA:3.40.50.300 269 551 2.5E-51 T 14-10-2018 IM40_03675 876c6b471b429e70c72a943fb879e6aa 555 Gene3D G3DSA:3.40.50.300 1 268 4.7E-40 T 14-10-2018 IM40_10785 0540c6e379d23a04f13a2edccc74b35d 64 SUPERFAMILY SSF48657 1 51 1.27E-9 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_10785 0540c6e379d23a04f13a2edccc74b35d 64 Gene3D G3DSA:1.10.1710.10 1 63 3.2E-11 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily IM40_10785 0540c6e379d23a04f13a2edccc74b35d 64 Pfam PF04352 ProQ/FINO family 1 58 4.8E-9 T 14-10-2018 IPR016103 ProQ/FinO domain IM40_08710 adb35a260053b2097538db742228e370 277 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 58 228 3.6E-25 T 14-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 IM40_08710 adb35a260053b2097538db742228e370 277 Gene3D G3DSA:3.90.1200.10 109 204 2.2E-6 T 14-10-2018 IM40_08710 adb35a260053b2097538db742228e370 277 SUPERFAMILY SSF56112 25 263 4.23E-26 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_08170 826f073c52ec133d4ae082693f946446 225 Gene3D G3DSA:1.20.910.10 12 224 5.8E-21 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_08170 826f073c52ec133d4ae082693f946446 225 SUPERFAMILY SSF48613 24 221 1.48E-21 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_08170 826f073c52ec133d4ae082693f946446 225 Pfam PF03070 TENA/THI-4/PQQC family 25 220 1.7E-12 T 14-10-2018 IPR004305 Thiaminase-2/PQQC IM40_08980 a2b8c608df2f4a3191c47c51fda5e72e 401 Pfam PF00155 Aminotransferase class I and II 44 388 1.1E-76 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IM40_08980 a2b8c608df2f4a3191c47c51fda5e72e 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 242 251 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 IM40_08980 a2b8c608df2f4a3191c47c51fda5e72e 401 Gene3D G3DSA:3.90.1150.10 14 385 1.2E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IM40_08980 a2b8c608df2f4a3191c47c51fda5e72e 401 Gene3D G3DSA:3.40.640.10 60 295 1.2E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IM40_08980 a2b8c608df2f4a3191c47c51fda5e72e 401 SUPERFAMILY SSF53383 1 396 2.29E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IM40_08980 a2b8c608df2f4a3191c47c51fda5e72e 401 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 399 3.4E-184 T 14-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 IM40_03190 5c560711146704cd75d4f574e97070c2 83 TIGRFAM TIGR00165 S18: ribosomal protein bS18 14 82 3.7E-31 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 SUPERFAMILY SSF46911 10 82 8.76E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 31 81 3.0E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 12 83 22.336 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 PRINTS PR00974 Ribosomal protein S18 family signature 48 55 1.4E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 PRINTS PR00974 Ribosomal protein S18 family signature 56 70 1.4E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 PRINTS PR00974 Ribosomal protein S18 family signature 38 48 1.4E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 PRINTS PR00974 Ribosomal protein S18 family signature 70 80 1.4E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 ProSitePatterns PS00057 Ribosomal protein S18 signature. 31 54 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 Pfam PF01084 Ribosomal protein S18 30 78 7.6E-26 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_03190 5c560711146704cd75d4f574e97070c2 83 Gene3D G3DSA:4.10.640.10 3 83 1.4E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 PRINTS PR00173 Glutamate-aspartate symporter signature 163 185 2.8E-20 T 14-10-2018 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 PRINTS PR00173 Glutamate-aspartate symporter signature 211 230 2.8E-20 T 14-10-2018 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 2.8E-20 T 14-10-2018 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 PRINTS PR00173 Glutamate-aspartate symporter signature 312 338 2.8E-20 T 14-10-2018 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 PRINTS PR00173 Glutamate-aspartate symporter signature 375 395 2.8E-20 T 14-10-2018 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 Gene3D G3DSA:1.10.3860.10 9 432 1.6E-82 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 SUPERFAMILY SSF118215 20 422 1.44E-64 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IM40_04350 716cd9302309cd04d2355bd6d9886a72 434 Pfam PF00375 Sodium:dicarboxylate symporter family 20 421 4.8E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IM40_07815 5a4a18f1991321e13303e1adea96914c 220 SUPERFAMILY SSF48613 27 217 4.0E-12 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_07815 5a4a18f1991321e13303e1adea96914c 220 Gene3D G3DSA:1.20.910.10 2 217 2.8E-13 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_03505 0cc3473af06efa2969e0ae97667e62f5 327 Gene3D G3DSA:1.20.81.30 148 263 4.5E-6 T 14-10-2018 IM40_03505 0cc3473af06efa2969e0ae97667e62f5 327 Pfam PF00482 Type II secretion system (T2SS), protein F 160 285 7.2E-15 T 14-10-2018 IPR018076 Type II secretion system F domain IM40_06860 47956b2949f2c2955ebe0dc9d02c0776 168 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 19 161 2.1E-22 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein IM40_06860 47956b2949f2c2955ebe0dc9d02c0776 168 SUPERFAMILY SSF160719 44 160 4.84E-10 T 14-10-2018 IM40_06860 47956b2949f2c2955ebe0dc9d02c0776 168 Pfam PF04965 Gene 25-like lysozyme 45 145 3.7E-11 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD IM40_07155 4d3e9de1af8a85793dd24033e71a5690 150 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 17 139 2.2E-36 T 14-10-2018 IPR005247 YbhB/YbcL IM40_07155 4d3e9de1af8a85793dd24033e71a5690 150 SUPERFAMILY SSF49777 2 145 5.1E-46 T 14-10-2018 IPR036610 PEBP-like superfamily IM40_07155 4d3e9de1af8a85793dd24033e71a5690 150 Gene3D G3DSA:3.90.280.10 1 145 1.1E-51 T 14-10-2018 IPR036610 PEBP-like superfamily IM40_07155 4d3e9de1af8a85793dd24033e71a5690 150 Pfam PF01161 Phosphatidylethanolamine-binding protein 12 143 1.5E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein IM40_00210 b65099b8b5777d5b0d541b84803249ac 437 Pfam PF13609 Gram-negative porin 87 413 1.6E-17 T 14-10-2018 IM40_00210 b65099b8b5777d5b0d541b84803249ac 437 SUPERFAMILY SSF56935 88 410 1.65E-19 T 14-10-2018 IM40_00210 b65099b8b5777d5b0d541b84803249ac 437 Gene3D G3DSA:2.40.160.10 87 434 2.0E-16 T 14-10-2018 IPR023614 Porin domain superfamily IM40_01040 74a47a6381ec36abe89c70825e0970f6 464 SUPERFAMILY SSF56281 169 411 9.01E-14 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_02390 3ca8cc74d7089b9fd83fba1874ddf2ce 273 Gene3D G3DSA:3.40.50.150 1 229 7.0E-37 T 14-10-2018 IM40_02390 3ca8cc74d7089b9fd83fba1874ddf2ce 273 SUPERFAMILY SSF53335 6 218 3.65E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02390 3ca8cc74d7089b9fd83fba1874ddf2ce 273 Pfam PF13847 Methyltransferase domain 8 138 1.9E-23 T 14-10-2018 IPR025714 Methyltransferase domain IM40_09990 c8f4198a39515e397fb5d921cf590d40 250 Pfam PF13614 AAA domain 3 173 5.0E-59 T 14-10-2018 IPR025669 AAA domain IM40_09990 c8f4198a39515e397fb5d921cf590d40 250 PIRSF PIRSF009320 2 50 1.2E-12 T 14-10-2018 IM40_09990 c8f4198a39515e397fb5d921cf590d40 250 PIRSF PIRSF009320 82 250 1.3E-9 T 14-10-2018 IM40_09990 c8f4198a39515e397fb5d921cf590d40 250 SUPERFAMILY SSF52540 3 247 3.88E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09990 c8f4198a39515e397fb5d921cf590d40 250 Gene3D G3DSA:3.40.50.300 1 249 1.1E-77 T 14-10-2018 IM40_07105 c4dfad69f7d87b28197f94f49fcbdac1 281 SUPERFAMILY SSF81345 9 267 2.09E-26 T 14-10-2018 IPR037294 ABC transporter, BtuC-like IM40_07105 c4dfad69f7d87b28197f94f49fcbdac1 281 Pfam PF00950 ABC 3 transport family 12 269 1.5E-56 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 IM40_01705 1c380dcb9890329b1899f6254a3278eb 605 Pfam PF05947 Type VI secretion system, TssF 9 603 5.9E-177 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like IM40_01705 1c380dcb9890329b1899f6254a3278eb 605 PIRSF PIRSF028304 4 604 8.8E-163 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like IM40_01705 1c380dcb9890329b1899f6254a3278eb 605 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 9 605 9.3E-178 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like IM40_10040 0ed0727c2f4aad438b9c66eb1dbe2c27 233 Pfam PF03070 TENA/THI-4/PQQC family 31 215 6.1E-5 T 14-10-2018 IPR004305 Thiaminase-2/PQQC IM40_10040 0ed0727c2f4aad438b9c66eb1dbe2c27 233 SUPERFAMILY SSF48613 17 222 9.32E-16 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_10040 0ed0727c2f4aad438b9c66eb1dbe2c27 233 Gene3D G3DSA:1.20.910.10 12 222 7.0E-15 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_10650 93147b8ad7c3ab3acd1e9bace1738ae1 589 SUPERFAMILY SSF52047 498 548 8.63E-6 T 14-10-2018 IM40_10650 93147b8ad7c3ab3acd1e9bace1738ae1 589 Gene3D G3DSA:2.40.10.10 148 248 1.9E-12 T 14-10-2018 IM40_10650 93147b8ad7c3ab3acd1e9bace1738ae1 589 Gene3D G3DSA:2.40.10.10 249 324 1.9E-12 T 14-10-2018 IM40_10650 93147b8ad7c3ab3acd1e9bace1738ae1 589 SUPERFAMILY SSF50494 151 344 2.44E-12 T 14-10-2018 IPR009003 Peptidase S1, PA clan IM40_10650 93147b8ad7c3ab3acd1e9bace1738ae1 589 Gene3D G3DSA:3.80.10.10 444 560 2.5E-8 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_05980 ae0245c03003474966a843274e69b58a 142 Pfam PF10116 Protein required for attachment to host cells 7 139 2.5E-18 T 14-10-2018 IPR019291 Host attachment protein IM40_07915 8270a8a7f8558af70589518f3e990900 326 Pfam PF06834 TraU protein 24 325 2.0E-115 T 14-10-2018 IPR009649 TraU IM40_09700 31e783bea514273fd8e90903cec5aa6d 86 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 42 4.5E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_09700 31e783bea514273fd8e90903cec5aa6d 86 SMART SM00966 6 51 3.1E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_09700 31e783bea514273fd8e90903cec5aa6d 86 Gene3D G3DSA:2.10.260.10 5 43 5.6E-8 T 14-10-2018 IM40_09700 31e783bea514273fd8e90903cec5aa6d 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 43 3.0E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 IM40_09700 31e783bea514273fd8e90903cec5aa6d 86 SUPERFAMILY SSF89447 4 48 1.18E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily IM40_02445 dc87b05758ed52462c04905fed2c18f0 243 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 119 187 1.6E-7 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IM40_02445 dc87b05758ed52462c04905fed2c18f0 243 SUPERFAMILY SSF56214 118 225 1.71E-10 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IM40_02445 dc87b05758ed52462c04905fed2c18f0 243 Gene3D G3DSA:3.90.470.20 119 213 4.3E-7 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IM40_00530 dd0d5fdde4a9840d385ba47d1d163401 193 Pfam PF09335 SNARE associated Golgi protein 44 155 2.3E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein IM40_02835 20639a19bebf0ea7fbd2b5d545ffbd0c 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 362 1.4E-126 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_02835 20639a19bebf0ea7fbd2b5d545ffbd0c 362 ProSitePatterns PS01348 MraY family signature 2. 191 202 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_02835 20639a19bebf0ea7fbd2b5d545ffbd0c 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 360 24.835 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IM40_02835 20639a19bebf0ea7fbd2b5d545ffbd0c 362 Pfam PF00953 Glycosyl transferase family 4 101 286 4.6E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 IM40_04830 92301481907221635606c4b982fa004d 245 Pfam PF04402 Protein of unknown function (DUF541) 43 207 1.8E-20 T 14-10-2018 IPR007497 Protein of unknown function DUF541 IM40_04830 92301481907221635606c4b982fa004d 245 PIRSF PIRSF029033 1 245 5.5E-63 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein IM40_10055 f150e4eb0ba6dbeb4fb803b638ea4526 817 SUPERFAMILY SSF52540 417 729 6.75E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10055 f150e4eb0ba6dbeb4fb803b638ea4526 817 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 207 399 5.7E-12 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 IM40_10055 f150e4eb0ba6dbeb4fb803b638ea4526 817 Gene3D G3DSA:3.40.50.300 609 784 5.3E-15 T 14-10-2018 IM40_04815 e455a899bbc9d27278379af4bfe38412 215 Gene3D G3DSA:3.30.420.40 3 206 2.2E-34 T 14-10-2018 IM40_04815 e455a899bbc9d27278379af4bfe38412 215 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 206 2.7E-35 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 IM40_04815 e455a899bbc9d27278379af4bfe38412 215 Gene3D G3DSA:3.30.420.40 95 178 2.2E-34 T 14-10-2018 IM40_04815 e455a899bbc9d27278379af4bfe38412 215 Pfam PF00814 Glycoprotease family 39 130 1.8E-18 T 14-10-2018 IPR000905 Gcp-like domain IM40_04815 e455a899bbc9d27278379af4bfe38412 215 SUPERFAMILY SSF53067 2 104 2.2E-18 T 14-10-2018 IM40_09565 27db4a8cdd1d5434771b23a37b5cacaa 395 SUPERFAMILY SSF88874 205 301 3.27E-5 T 14-10-2018 IM40_09565 27db4a8cdd1d5434771b23a37b5cacaa 395 Pfam PF12571 Phage tail-collar fibre protein 1 77 2.2E-5 T 14-10-2018 IPR022225 Phage tail fibre protein IM40_08615 4245d5a56495035cf5a9aecb81108ba6 419 SUPERFAMILY SSF109998 26 194 8.04E-27 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily IM40_08615 4245d5a56495035cf5a9aecb81108ba6 419 Gene3D G3DSA:3.10.50.40 165 274 2.9E-29 T 14-10-2018 IM40_08615 4245d5a56495035cf5a9aecb81108ba6 419 SUPERFAMILY SSF54534 169 269 7.85E-23 T 14-10-2018 IM40_08615 4245d5a56495035cf5a9aecb81108ba6 419 Pfam PF00639 PPIC-type PPIASE domain 184 266 9.6E-18 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 IM40_08615 4245d5a56495035cf5a9aecb81108ba6 419 Gene3D G3DSA:1.10.4030.10 23 145 3.4E-19 T 14-10-2018 IM40_08615 4245d5a56495035cf5a9aecb81108ba6 419 Pfam PF09312 SurA N-terminal domain 26 137 4.0E-12 T 14-10-2018 IPR015391 SurA N-terminal IM40_07935 dc132a9259761138fb1da11beacd2884 463 Pfam PF06122 Conjugative relaxosome accessory transposon protein 25 385 1.7E-103 T 14-10-2018 IPR010927 Type IV conjugative transfer system protein TraH IM40_10505 a3fbf4fd61b479f25fda45cf82af5b95 81 SUPERFAMILY SSF47598 2 41 9.18E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_10505 a3fbf4fd61b479f25fda45cf82af5b95 81 Pfam PF01402 Ribbon-helix-helix protein, copG family 2 38 6.2E-8 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 IM40_10405 b80a9e30e365e518db7aed2e361eef20 623 SUPERFAMILY SSF56281 162 402 1.67E-9 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_03010 e0755b201911dc44773a8cd1bc46f41d 188 SUPERFAMILY SSF48150 2 185 2.92E-75 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 IM40_03010 e0755b201911dc44773a8cd1bc46f41d 188 Gene3D G3DSA:1.10.340.30 1 186 3.7E-77 T 14-10-2018 IM40_03010 e0755b201911dc44773a8cd1bc46f41d 188 Pfam PF03352 Methyladenine glycosylase 6 182 9.4E-76 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 IM40_00820 8a1bc63673c33e604ad0515216b60540 141 Gene3D G3DSA:3.30.530.20 4 137 3.2E-34 T 14-10-2018 IPR023393 START-like domain superfamily IM40_00820 8a1bc63673c33e604ad0515216b60540 141 SUPERFAMILY SSF55961 12 136 1.34E-24 T 14-10-2018 IM40_04415 b7f03e409d4abc6c3783a0f7ac768c59 113 SUPERFAMILY SSF69786 12 98 7.32E-21 T 14-10-2018 IPR036591 YggU-like superfamily IM40_04415 b7f03e409d4abc6c3783a0f7ac768c59 113 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 21 95 4.0E-20 T 14-10-2018 IPR003746 Protein of unknown function DUF167 IM40_04415 b7f03e409d4abc6c3783a0f7ac768c59 113 Gene3D G3DSA:3.30.1200.10 10 113 6.3E-22 T 14-10-2018 IPR036591 YggU-like superfamily IM40_04415 b7f03e409d4abc6c3783a0f7ac768c59 113 Hamap MF_00634 UPF0235 protein YggU [yggU]. 17 110 16.931 T 14-10-2018 IPR003746 Protein of unknown function DUF167 IM40_04415 b7f03e409d4abc6c3783a0f7ac768c59 113 SMART SM01152 17 98 1.1E-23 T 14-10-2018 IPR003746 Protein of unknown function DUF167 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 Pfam PF00750 tRNA synthetases class I (R) 21 290 6.2E-46 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 Gene3D G3DSA:3.40.50.620 22 344 1.8E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 PRINTS PR01038 Arginyl-tRNA synthetase signature 214 235 5.7E-14 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 PRINTS PR01038 Arginyl-tRNA synthetase signature 68 81 5.7E-14 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 PRINTS PR01038 Arginyl-tRNA synthetase signature 29 44 5.7E-14 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 PRINTS PR01038 Arginyl-tRNA synthetase signature 44 60 5.7E-14 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 SUPERFAMILY SSF52374 25 280 9.7E-45 T 14-10-2018 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 SUPERFAMILY SSF47323 365 467 1.05E-5 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_02585 f3f985a4ac79e56533a49c9659fa634e 480 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 48 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IM40_06160 e53f504f2ad3a007f076a4640ff18ba7 197 Pfam PF04972 BON domain 130 197 5.5E-19 T 14-10-2018 IPR007055 BON domain IM40_06160 e53f504f2ad3a007f076a4640ff18ba7 197 Pfam PF04972 BON domain 46 113 4.3E-16 T 14-10-2018 IPR007055 BON domain IM40_06160 e53f504f2ad3a007f076a4640ff18ba7 197 SMART SM00749 135 197 0.0015 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria IM40_06160 e53f504f2ad3a007f076a4640ff18ba7 197 SMART SM00749 51 114 0.5 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria IM40_10980 e68d163873bcb82c02565b27777ad7e5 260 Gene3D G3DSA:3.40.50.300 63 249 1.9E-45 T 14-10-2018 IM40_10980 e68d163873bcb82c02565b27777ad7e5 260 Pfam PF01695 IstB-like ATP binding protein 55 232 8.0E-61 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 IM40_10980 e68d163873bcb82c02565b27777ad7e5 260 PIRSF PIRSF003073 1 252 4.4E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IM40_10980 e68d163873bcb82c02565b27777ad7e5 260 SUPERFAMILY SSF52540 86 249 4.59E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_10980 e68d163873bcb82c02565b27777ad7e5 260 SMART SM00382 99 236 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain IM40_07740 ef30f1da24b0232dcc87fce3bba8035a 434 SUPERFAMILY SSF103473 6 421 1.14E-54 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_07740 ef30f1da24b0232dcc87fce3bba8035a 434 Pfam PF07690 Major Facilitator Superfamily 14 366 1.5E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IM40_07740 ef30f1da24b0232dcc87fce3bba8035a 434 Gene3D G3DSA:1.20.1250.20 7 421 2.6E-51 T 14-10-2018 IM40_09310 7ba908c87b8fc59e65dc841159bb878d 127 Pfam PF06412 Conjugal transfer protein TraD 26 87 6.7E-9 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 IM40_00870 d11fae463990da0580fcef64e7597c23 315 Gene3D G3DSA:3.40.50.2000 1 121 6.8E-10 T 14-10-2018 IM40_00870 d11fae463990da0580fcef64e7597c23 315 Gene3D G3DSA:3.40.50.2000 131 311 5.2E-42 T 14-10-2018 IM40_00870 d11fae463990da0580fcef64e7597c23 315 SUPERFAMILY SSF53756 1 311 5.81E-58 T 14-10-2018 IM40_00870 d11fae463990da0580fcef64e7597c23 315 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 127 284 3.7E-26 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 IM40_01755 c521b2806d5026db292a5d9dba29a09c 154 SUPERFAMILY SSF54001 4 136 3.26E-15 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily IM40_01755 c521b2806d5026db292a5d9dba29a09c 154 Gene3D G3DSA:3.90.70.10 1 149 6.1E-19 T 14-10-2018 IM40_01755 c521b2806d5026db292a5d9dba29a09c 154 Pfam PF00112 Papain family cysteine protease 57 131 6.3E-6 T 14-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 IM40_09285 f9f16a4ed6e961c219896085a77163c4 627 SUPERFAMILY SSF52540 149 611 2.12E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09285 f9f16a4ed6e961c219896085a77163c4 627 Gene3D G3DSA:3.40.50.300 396 620 1.7E-34 T 14-10-2018 IM40_09285 f9f16a4ed6e961c219896085a77163c4 627 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 174 613 2.6E-66 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 IM40_03045 4e6b8d781f7043c1a90c48e9ab765068 421 SMART SM00369 269 293 190.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype IM40_03045 4e6b8d781f7043c1a90c48e9ab765068 421 SMART SM00369 342 365 1.3 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype IM40_03045 4e6b8d781f7043c1a90c48e9ab765068 421 SMART SM00369 294 317 25.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype IM40_03045 4e6b8d781f7043c1a90c48e9ab765068 421 SMART SM00369 200 223 0.079 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype IM40_03045 4e6b8d781f7043c1a90c48e9ab765068 421 Gene3D G3DSA:3.80.10.10 118 418 2.0E-45 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_03045 4e6b8d781f7043c1a90c48e9ab765068 421 SUPERFAMILY SSF52058 140 395 3.74E-39 T 14-10-2018 IM40_07135 2a2dbabd5a1100003485c6a522635c7c 203 Pfam PF02698 DUF218 domain 39 179 4.5E-14 T 14-10-2018 IPR003848 Domain of unknown function DUF218 IM40_07135 2a2dbabd5a1100003485c6a522635c7c 203 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 1 186 6.0E-9 T 14-10-2018 IM40_03515 56d8ff7d01d5eb06bb1e6b70afbac90e 159 Pfam PF05258 Protein of unknown function (DUF721) 12 104 9.1E-14 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 IM40_08815 378d282488795f12dd582879acf36dd0 624 Pfam PF13520 Amino acid permease 53 444 2.5E-24 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IM40_08815 378d282488795f12dd582879acf36dd0 624 Gene3D G3DSA:1.20.1740.10 41 478 2.5E-25 T 14-10-2018 IM40_09445 211deae5068a3e3a8143535d5207b15c 485 SUPERFAMILY SSF56281 140 408 1.69E-10 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_07245 6d4397f31534d418f7dad3e628f23cd0 218 SUPERFAMILY SSF53474 14 215 8.68E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_07245 6d4397f31534d418f7dad3e628f23cd0 218 Pfam PF02230 Phospholipase/Carboxylesterase 12 212 2.3E-35 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 IM40_07245 6d4397f31534d418f7dad3e628f23cd0 218 Gene3D G3DSA:3.40.50.1820 1 214 1.2E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold IM40_02255 0aac682a86debded93cb5ebdce9dd6c3 270 Gene3D G3DSA:3.40.30.10 149 261 1.2E-9 T 14-10-2018 IM40_02255 0aac682a86debded93cb5ebdce9dd6c3 270 Pfam PF13728 F plasmid transfer operon protein 50 264 1.5E-66 T 14-10-2018 IPR039555 F plasmid transfer operon protein IM40_02255 0aac682a86debded93cb5ebdce9dd6c3 270 SUPERFAMILY SSF52833 167 260 1.9E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_03410 b3c98cb6a1694206fc31605f6fcfc4d9 156 Gene3D G3DSA:1.10.940.10 7 150 1.6E-29 T 14-10-2018 IPR035926 NusB-like superfamily IM40_03410 b3c98cb6a1694206fc31605f6fcfc4d9 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 147 5.0E-31 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 IM40_03410 b3c98cb6a1694206fc31605f6fcfc4d9 156 Pfam PF01029 NusB family 14 146 1.3E-20 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 IM40_03410 b3c98cb6a1694206fc31605f6fcfc4d9 156 SUPERFAMILY SSF48013 14 143 1.44E-24 T 14-10-2018 IPR035926 NusB-like superfamily IM40_03410 b3c98cb6a1694206fc31605f6fcfc4d9 156 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 149 17.136 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 IM40_00150 632e17b24b51cc0336b32fcb7a888256 508 SUPERFAMILY SSF53756 44 493 1.43E-22 T 14-10-2018 IM40_00150 632e17b24b51cc0336b32fcb7a888256 508 Gene3D G3DSA:3.40.50.2000 332 473 3.0E-14 T 14-10-2018 IM40_01030 fab1bda095c4855dad0c992bf13c2ccc 311 Gene3D G3DSA:3.40.50.150 8 179 2.9E-5 T 14-10-2018 IM40_01030 fab1bda095c4855dad0c992bf13c2ccc 311 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 47 309 3.0E-70 T 14-10-2018 IPR015324 Ribosomal protein Rsm22-like GO:0006412|GO:0008168 IM40_01030 fab1bda095c4855dad0c992bf13c2ccc 311 SUPERFAMILY SSF53335 36 170 5.03E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_02385 7740ec2d13d8246bd9fd2682397cc0d7 530 Gene3D G3DSA:3.60.15.10 3 530 5.4E-161 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_02385 7740ec2d13d8246bd9fd2682397cc0d7 530 SUPERFAMILY SSF56281 248 494 6.94E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_02385 7740ec2d13d8246bd9fd2682397cc0d7 530 Pfam PF13483 Beta-lactamase superfamily domain 252 322 2.8E-10 T 14-10-2018 IM40_09580 4fcad4698c4db8e200894cf889af87cf 80 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 79 1.6E-17 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative IM40_09630 87df186e7b9396a9cf9ebd845b5fec81 513 SUPERFAMILY SSF81901 297 383 3.53E-7 T 14-10-2018 IM40_09630 87df186e7b9396a9cf9ebd845b5fec81 513 Gene3D G3DSA:1.25.40.10 223 486 6.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_02920 d827d4cbef937bfcf2458fd85371f332 462 SUPERFAMILY SSF103473 24 452 8.37E-11 T 14-10-2018 IPR036259 MFS transporter superfamily IM40_02920 d827d4cbef937bfcf2458fd85371f332 462 Pfam PF03219 TLC ATP/ADP transporter 16 451 9.8E-23 T 14-10-2018 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0006862|GO:0016021 IM40_08060 e18143a751ddb6f5c8a6ec6bef12ad28 1111 Gene3D G3DSA:2.180.10.10 398 873 4.5E-32 T 14-10-2018 IM40_08060 e18143a751ddb6f5c8a6ec6bef12ad28 1111 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 795 873 7.7E-18 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 IM40_04430 68ca7b67de3f8f16de33e763a90668fd 265 SUPERFAMILY SSF81345 4 251 8.89E-28 T 14-10-2018 IPR037294 ABC transporter, BtuC-like IM40_04430 68ca7b67de3f8f16de33e763a90668fd 265 Pfam PF00950 ABC 3 transport family 2 252 3.5E-59 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 IM40_00650 da0ace0c9be36ca97369deec1b973754 113 Gene3D G3DSA:3.10.450.50 25 113 2.1E-10 T 14-10-2018 IM40_00650 da0ace0c9be36ca97369deec1b973754 113 SUPERFAMILY SSF54427 32 112 6.14E-13 T 14-10-2018 IPR032710 NTF2-like domain superfamily IM40_00650 da0ace0c9be36ca97369deec1b973754 113 Pfam PF14534 Domain of unknown function (DUF4440) 29 105 2.1E-9 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 IM40_03240 e3932e592f3b96de417479ef422b4f34 147 Pfam PF11164 Protein of unknown function (DUF2948) 10 146 8.6E-36 T 14-10-2018 IPR021335 Protein of unknown function DUF2948 IM40_01020 cb2eed66dc763112da9117c5de5dd4eb 112 Pfam PF02643 Uncharacterized ACR, COG1430 15 111 3.6E-26 T 14-10-2018 IPR003795 Protein of unknown function DUF192 IM40_01020 cb2eed66dc763112da9117c5de5dd4eb 112 Gene3D G3DSA:2.60.120.1140 1 112 2.2E-36 T 14-10-2018 IPR038695 Saro_0823-like superfamily IM40_04440 62bf973075012fdebc32a378b71e538f 345 Pfam PF00953 Glycosyl transferase family 4 78 228 2.4E-34 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 IM40_08125 1c677dc1605c8a77e547aea31a08dde4 322 Pfam PF02661 Fic/DOC family 98 197 3.2E-22 T 14-10-2018 IPR003812 Fido domain IM40_08125 1c677dc1605c8a77e547aea31a08dde4 322 Gene3D G3DSA:1.10.3290.10 32 260 1.9E-53 T 14-10-2018 IPR036597 Fido-like domain superfamily IM40_08125 1c677dc1605c8a77e547aea31a08dde4 322 SUPERFAMILY SSF140931 79 255 2.22E-40 T 14-10-2018 IPR036597 Fido-like domain superfamily IM40_04265 435093ff00eb23170b7ec57a28f0cd08 156 SUPERFAMILY SSF82861 4 85 3.01E-8 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 IM40_04265 435093ff00eb23170b7ec57a28f0cd08 156 SUPERFAMILY SSF50182 86 147 1.14E-12 T 14-10-2018 IPR010920 LSM domain superfamily IM40_04265 435093ff00eb23170b7ec57a28f0cd08 156 Pfam PF00924 Mechanosensitive ion channel 45 147 1.4E-22 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 IM40_04265 435093ff00eb23170b7ec57a28f0cd08 156 Gene3D G3DSA:2.30.30.60 102 148 2.4E-8 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily IM40_00435 360a143c77bf4c669893b9a4cf24389c 194 Pfam PF02622 Uncharacterized ACR, COG1678 23 181 1.6E-44 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 IM40_00435 360a143c77bf4c669893b9a4cf24389c 194 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 12 194 34.856 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 IM40_00435 360a143c77bf4c669893b9a4cf24389c 194 Gene3D G3DSA:3.40.1740.10 10 194 6.2E-63 T 14-10-2018 IM40_00435 360a143c77bf4c669893b9a4cf24389c 194 SUPERFAMILY SSF143456 13 194 4.58E-59 T 14-10-2018 IM40_07140 5e7fd89430c5006f4e6324f4648e8217 241 SUPERFAMILY SSF69593 5 231 1.57E-33 T 14-10-2018 IM40_07140 5e7fd89430c5006f4e6324f4648e8217 241 SMART SM00563 70 184 7.8E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IM40_07140 5e7fd89430c5006f4e6324f4648e8217 241 Pfam PF01553 Acyltransferase 57 181 3.9E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 SUPERFAMILY SSF109635 3 94 5.89E-32 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 98 122 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 16 125 3.3E-45 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 93 128 7.7E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 SUPERFAMILY SSF57716 95 134 7.98E-9 T 14-10-2018 IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 Gene3D G3DSA:1.20.120.910 7 136 6.3E-37 T 14-10-2018 IM40_04125 14b537bb9e5d100752f180f44f6c310a 136 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 12 134 28.331 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 IM40_05215 3743f42cfc806273ed57398fcc24672e 90 Pfam PF04977 Septum formation initiator 4 82 1.3E-10 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC IM40_06950 3c20d795c3998a9135c2e64414f42824 901 SUPERFAMILY SSF52540 265 609 1.77E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_06950 3c20d795c3998a9135c2e64414f42824 901 Pfam PF12705 PD-(D/E)XK nuclease superfamily 639 835 1.2E-18 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IM40_11435 4b96385816e185e8dca1e21a2e85fc49 404 SUPERFAMILY SSF81901 59 130 2.75E-9 T 14-10-2018 IM40_11435 4b96385816e185e8dca1e21a2e85fc49 404 Gene3D G3DSA:1.25.40.10 60 145 2.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_07640 591b63279fd8c56b03c4579e3cb9fd76 224 Pfam PF02163 Peptidase family M50 123 168 1.1E-6 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 IM40_03860 1ad632efda177fcae44188235a08019b 150 SUPERFAMILY SSF55486 2 86 2.38E-7 T 14-10-2018 IM40_11010 b2ad99c4ae8da9e3c258f2335d85ad5e 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 85 3.7E-28 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 IM40_11010 b2ad99c4ae8da9e3c258f2335d85ad5e 101 SMART SM00530 15 71 2.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_11010 b2ad99c4ae8da9e3c258f2335d85ad5e 101 Gene3D G3DSA:1.10.260.40 1 98 8.5E-31 T 14-10-2018 IM40_11010 b2ad99c4ae8da9e3c258f2335d85ad5e 101 Pfam PF01381 Helix-turn-helix 19 70 3.7E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IM40_11010 b2ad99c4ae8da9e3c258f2335d85ad5e 101 SUPERFAMILY SSF47413 12 92 3.84E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.7E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 151 4.5E-46 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.1E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 1.1E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 1.1E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 1.1E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 1.1E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 SUPERFAMILY SSF53098 3 155 4.74E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 Gene3D G3DSA:3.30.420.10 3 158 3.0E-48 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 154 42.237 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IM40_06720 beef4dba89fe74309fb8d74cc4d3adfb 165 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 IM40_07125 98211ab4f4fe322125e6481780cf90ec 298 Pfam PF02687 FtsX-like permease family 201 287 1.9E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 Pfam PF13604 AAA domain 382 567 2.1E-50 T 14-10-2018 IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 Gene3D G3DSA:2.30.30.940 753 844 2.1E-20 T 14-10-2018 IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 SUPERFAMILY SSF52540 490 895 2.66E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 Gene3D G3DSA:3.30.930.30 2 208 2.8E-51 T 14-10-2018 IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 SUPERFAMILY SSF52540 275 515 3.16E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 Pfam PF03389 MobA/MobL family 17 229 4.3E-38 T 14-10-2018 IPR005053 MobA/MobL protein IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 Gene3D G3DSA:3.40.50.300 337 545 7.3E-38 T 14-10-2018 IM40_02205 2b95ab103c4ecee0b402d2fe7f8011d7 1103 Gene3D G3DSA:3.40.50.300 685 890 2.1E-20 T 14-10-2018 IM40_04730 25c0ffe90b615b0940b2c31982f5a899 99 Pfam PF04800 ETC complex I subunit conserved region 4 98 1.6E-25 T 14-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 IM40_04730 25c0ffe90b615b0940b2c31982f5a899 99 Gene3D G3DSA:3.30.160.190 3 76 3.3E-25 T 14-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_04070 aea2bb1e6cae3a2ccb79090365857003 435 Pfam PF00375 Sodium:dicarboxylate symporter family 45 417 8.0E-31 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IM40_04070 aea2bb1e6cae3a2ccb79090365857003 435 SUPERFAMILY SSF118215 46 417 6.41E-31 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IM40_04070 aea2bb1e6cae3a2ccb79090365857003 435 Gene3D G3DSA:1.10.3860.10 34 427 9.3E-22 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IM40_02380 74b77493fc3486f7d956bee9db38137f 407 Gene3D G3DSA:1.20.910.10 186 404 5.4E-30 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_02380 74b77493fc3486f7d956bee9db38137f 407 SUPERFAMILY SSF48613 211 367 1.46E-12 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_04235 812a79ad5ff2bbd05252d4a23148a190 318 Gene3D G3DSA:3.90.1200.10 117 296 7.7E-16 T 14-10-2018 IM40_04235 812a79ad5ff2bbd05252d4a23148a190 318 SUPERFAMILY SSF56112 14 281 1.17E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_04235 812a79ad5ff2bbd05252d4a23148a190 318 Pfam PF01636 Phosphotransferase enzyme family 33 232 7.8E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase IM40_03645 2c8818d62742d0a2af0229513e0ea665 215 Pfam PF10090 Histidine phosphotransferase C-terminal domain 76 203 4.0E-15 T 14-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal IM40_03645 2c8818d62742d0a2af0229513e0ea665 215 Gene3D G3DSA:1.10.287.130 1 70 1.4E-22 T 14-10-2018 IM40_03645 2c8818d62742d0a2af0229513e0ea665 215 Gene3D G3DSA:3.30.565.10 75 211 8.2E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IM40_11440 d76d3a187f50a88de8e9a371acf80f91 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 1.4E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_11440 d76d3a187f50a88de8e9a371acf80f91 343 Pfam PF01548 Transposase 6 144 1.6E-12 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_07150 04258816113e0253451c1f6819ced1c5 175 SUPERFAMILY SSF52047 89 162 3.34E-12 T 14-10-2018 IM40_07150 04258816113e0253451c1f6819ced1c5 175 Gene3D G3DSA:3.80.10.10 49 172 7.3E-14 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily IM40_07150 04258816113e0253451c1f6819ced1c5 175 Pfam PF13855 Leucine rich repeat 98 153 3.5E-7 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 IM40_03750 bb18bbfb39328134d2d6d446700ede3b 103 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 71 90 3.1E-7 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat IM40_03750 bb18bbfb39328134d2d6d446700ede3b 103 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 20 39 3.1E-7 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat IM40_11225 d6d6a585588ebbb1528710eb8ce1b311 352 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 43 229 2.4E-5 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 IM40_09245 d6d6a585588ebbb1528710eb8ce1b311 352 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 43 229 2.4E-5 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 IM40_02510 f6a53d62d9308bb98f54568a3e49402c 397 Gene3D G3DSA:3.90.1200.10 153 320 7.2E-26 T 14-10-2018 IM40_02510 f6a53d62d9308bb98f54568a3e49402c 397 Pfam PF01636 Phosphotransferase enzyme family 85 286 6.3E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase IM40_02510 f6a53d62d9308bb98f54568a3e49402c 397 SUPERFAMILY SSF56112 64 270 4.29E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily IM40_10085 522b091756cf9f249b159474fadd024f 345 Pfam PF03743 Bacterial conjugation TrbI-like protein 134 317 5.2E-44 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI IM40_10085 522b091756cf9f249b159474fadd024f 345 Gene3D G3DSA:1.10.1200.160 261 296 4.3E-49 T 14-10-2018 IM40_10085 522b091756cf9f249b159474fadd024f 345 Gene3D G3DSA:2.40.128.260 137 315 4.3E-49 T 14-10-2018 IM40_03020 0161688d9efbdd1ce94136b9543928ce 135 SUPERFAMILY SSF81383 25 66 1.83E-8 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_03020 0161688d9efbdd1ce94136b9543928ce 135 Gene3D G3DSA:1.20.1280.50 15 68 2.3E-7 T 14-10-2018 IM40_03020 0161688d9efbdd1ce94136b9543928ce 135 Pfam PF12937 F-box-like 31 65 9.0E-6 T 14-10-2018 IPR001810 F-box domain GO:0005515 IM40_06560 a606526b44adec367f7824302e1dba62 207 Gene3D G3DSA:3.40.30.10 38 207 8.9E-55 T 14-10-2018 IM40_06560 a606526b44adec367f7824302e1dba62 207 SUPERFAMILY SSF52833 46 207 8.7E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_06560 a606526b44adec367f7824302e1dba62 207 Pfam PF02630 SCO1/SenC 41 190 3.6E-45 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_06510 b136cf26538eb60f4aafa016978c7e25 103 SUPERFAMILY SSF52833 5 102 2.24E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_06510 b136cf26538eb60f4aafa016978c7e25 103 Gene3D G3DSA:3.40.30.10 5 103 2.6E-30 T 14-10-2018 IM40_02460 e103f00d4dc282bf254e33bb7a21839c 278 Gene3D G3DSA:3.40.50.1000 15 213 9.7E-6 T 14-10-2018 IPR023214 HAD superfamily IM40_02460 e103f00d4dc282bf254e33bb7a21839c 278 SUPERFAMILY SSF56784 41 210 1.74E-8 T 14-10-2018 IPR036412 HAD-like superfamily IM40_02460 e103f00d4dc282bf254e33bb7a21839c 278 Pfam PF11019 Protein of unknown function (DUF2608) 38 264 1.9E-25 T 14-10-2018 IPR022565 Protein of unknown function DUF2608 IM40_02460 e103f00d4dc282bf254e33bb7a21839c 278 ProDom PD317075 PRECURSOR RP296 SIGNAL 45 271 7.0E-7 T 14-10-2018 IPR020531 Uncharacterised protein family, RP296 IM40_00855 da1a5150615c9f3a05b8b8c655eb0d6b 252 SUPERFAMILY SSF111331 23 239 1.57E-55 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IM40_00855 da1a5150615c9f3a05b8b8c655eb0d6b 252 Pfam PF01513 ATP-NAD kinase 21 211 2.7E-18 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 IM40_00855 da1a5150615c9f3a05b8b8c655eb0d6b 252 Hamap MF_00361 NAD kinase [nadK]. 1 251 21.37 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 IM40_00855 da1a5150615c9f3a05b8b8c655eb0d6b 252 Gene3D G3DSA:3.40.50.10330 29 241 2.2E-38 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 IM40_00855 da1a5150615c9f3a05b8b8c655eb0d6b 252 Gene3D G3DSA:2.60.200.30 97 228 2.2E-38 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 IM40_06850 48d06fd1f5e2a43f3b300dee658f4122 631 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 158 626 6.1E-193 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath IM40_06850 48d06fd1f5e2a43f3b300dee658f4122 631 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 158 1.4E-45 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 IM40_06850 48d06fd1f5e2a43f3b300dee658f4122 631 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 156 1.6E-45 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 IM40_06850 48d06fd1f5e2a43f3b300dee658f4122 631 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 204 626 3.4E-178 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath IM40_00740 aa12e4d16207aa26953596a6185cdff8 136 Gene3D G3DSA:3.40.50.150 27 131 1.7E-6 T 14-10-2018 IM40_00740 aa12e4d16207aa26953596a6185cdff8 136 SUPERFAMILY SSF53335 48 105 1.83E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_05650 43ab93575a73315ee2b3bf5f99d82f9b 155 Gene3D G3DSA:3.40.30.10 3 153 2.3E-44 T 14-10-2018 IM40_05650 43ab93575a73315ee2b3bf5f99d82f9b 155 SUPERFAMILY SSF52833 3 154 4.07E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily IM40_05650 43ab93575a73315ee2b3bf5f99d82f9b 155 Pfam PF00578 AhpC/TSA family 6 133 1.0E-31 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IM40_05650 43ab93575a73315ee2b3bf5f99d82f9b 155 PIRSF PIRSF000239 1 155 1.8E-26 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IM40_10285 01c4dd3296ed20f8f129a1b00dd5520a 92 Pfam PF01527 Transposase 3 75 1.1E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IM40_10285 01c4dd3296ed20f8f129a1b00dd5520a 92 Gene3D G3DSA:1.10.10.60 19 80 2.0E-5 T 14-10-2018 IM40_10285 01c4dd3296ed20f8f129a1b00dd5520a 92 SUPERFAMILY SSF46689 2 77 1.97E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IM40_04450 38757566978c8abe4de20f19ad7e3fd3 109 Pfam PF09538 Protein of unknown function (FYDLN_acid) 8 102 6.1E-17 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid IM40_08480 0ed3771e7a3e55b5784c9078e9e5f6cb 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 89 2.0E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_08480 0ed3771e7a3e55b5784c9078e9e5f6cb 97 Gene3D G3DSA:3.30.2310.20 3 96 1.5E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_08260 30bce7aece736df5a4ce93460dc5ca76 87 Gene3D G3DSA:3.30.2310.20 1 87 8.2E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily IM40_08260 30bce7aece736df5a4ce93460dc5ca76 87 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 87 6.2E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_08260 30bce7aece736df5a4ce93460dc5ca76 87 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 85 1.3E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family IM40_02245 11a5933b8e43a1390a3381d65074f444 929 Pfam PF07916 TraG-like protein, N-terminal region 4 464 5.5E-89 T 14-10-2018 IPR012931 TraG-like, N-terminal IM40_07820 8119d7d571d570753bcbe9edacebe2cf 393 SUPERFAMILY SSF48613 202 294 2.07E-8 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_07820 8119d7d571d570753bcbe9edacebe2cf 393 Gene3D G3DSA:1.20.910.10 187 390 1.1E-17 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_08485 3260207970eb16d93fc30af039fe6281 223 SUPERFAMILY SSF143081 2 221 5.62E-72 T 14-10-2018 IPR036590 SOS response associated peptidase-like IM40_08485 3260207970eb16d93fc30af039fe6281 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 1.1E-65 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) IM40_08485 3260207970eb16d93fc30af039fe6281 223 Gene3D G3DSA:3.90.1680.10 1 223 4.7E-70 T 14-10-2018 IPR036590 SOS response associated peptidase-like IM40_09340 7f7c32028793d75d1ef6c52279f2a158 141 Gene3D G3DSA:2.10.109.10 27 140 8.9E-34 T 14-10-2018 IM40_09340 7f7c32028793d75d1ef6c52279f2a158 141 Pfam PF00717 Peptidase S24-like 65 121 4.8E-7 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IM40_09340 7f7c32028793d75d1ef6c52279f2a158 141 SUPERFAMILY SSF51306 15 139 5.06E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IM40_03315 4cd32da1d79ecc8bbb2bfdb57313d0ba 77 Pfam PF07330 Protein of unknown function (DUF1467) 1 75 1.5E-20 T 14-10-2018 IPR009935 Protein of unknown function DUF1467 IM40_11485 6da64acc25f7a1249111fbdaf4f5cd1a 105 Pfam PF13728 F plasmid transfer operon protein 22 96 2.2E-6 T 14-10-2018 IPR039555 F plasmid transfer operon protein IM40_05390 58a35272548d32bd3e75042c5cb2cadd 66 Pfam PF04070 Domain of unknown function (DUF378) 9 62 9.3E-21 T 14-10-2018 IPR007211 Protein of unknown function DUF378 IM40_06195 09b31fb63332a118f73cfad17de964ec 88 SUPERFAMILY SSF54909 1 85 5.37E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel IM40_07985 8d9cee191929e53968af3c1fcae32d6e 120 TIGRFAM TIGR02913 HAF_rpt: probable extracellular repeat, HAF family 54 88 5.5E-6 T 14-10-2018 IPR014262 Extracellular HAF IM40_11075 2914f723dc48f051d93df19aa2a00c26 418 Gene3D G3DSA:2.170.15.10 225 367 3.3E-13 T 14-10-2018 IM40_11075 2914f723dc48f051d93df19aa2a00c26 418 SUPERFAMILY SSF56973 257 356 2.49E-8 T 14-10-2018 IM40_05885 ceb8bb77cf621223468206692f997697 72 Pfam PF13683 Integrase core domain 2 26 3.4E-6 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_11150 35cb11bbff324c34d67c43267f5e68eb 289 Pfam PF13612 Transposase DDE domain 105 257 8.2E-62 T 14-10-2018 IPR025668 Transposase DDE domain IM40_09640 517bab626c772b62f962912f0fffdea9 138 SUPERFAMILY SSF53098 11 90 1.08E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_09640 517bab626c772b62f962912f0fffdea9 138 Pfam PF00665 Integrase core domain 11 43 2.6E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_02325 9ce03dc22aa0731d0e40bd9655bc0d3a 232 Pfam PF06586 TraK protein 5 223 8.1E-32 T 14-10-2018 IPR010563 Pilus assembly TraK IM40_00775 0e1d68b96bb715149b89b7115604b692 416 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 252 411 1.1E-8 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 IM40_00775 0e1d68b96bb715149b89b7115604b692 416 Gene3D G3DSA:2.40.50.140 2 70 5.7E-11 T 14-10-2018 IM40_00775 0e1d68b96bb715149b89b7115604b692 416 SUPERFAMILY SSF53335 59 415 5.63E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00775 0e1d68b96bb715149b89b7115604b692 416 Gene3D G3DSA:3.40.1350.30 116 253 1.1E-70 T 14-10-2018 IM40_00775 0e1d68b96bb715149b89b7115604b692 416 Gene3D G3DSA:3.40.50.150 71 411 1.1E-70 T 14-10-2018 IM40_04130 b60fe9463fb7275f5cf2fac2bbba0a6f 305 SUPERFAMILY SSF69796 24 258 5.23E-64 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 IM40_04130 b60fe9463fb7275f5cf2fac2bbba0a6f 305 Pfam PF02511 Thymidylate synthase complementing protein 33 243 6.3E-53 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 IM40_04130 b60fe9463fb7275f5cf2fac2bbba0a6f 305 Gene3D G3DSA:3.30.1360.170 16 263 7.9E-68 T 14-10-2018 IM40_04130 b60fe9463fb7275f5cf2fac2bbba0a6f 305 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 31 249 2.4E-61 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 IM40_04130 b60fe9463fb7275f5cf2fac2bbba0a6f 305 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 27 257 27.125 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 IM40_01955 0f5e6ab22fac6c1e33de512ab8d15677 472 Pfam PF16980 Putative citrate transport 35 471 5.5E-155 T 14-10-2018 IPR031566 Putative citrate transporter IM40_09550 e072ac02a2a298a3e41c7bb0bf1a49f9 287 Pfam PF04865 Baseplate J-like protein 92 228 9.8E-12 T 14-10-2018 IPR006949 Baseplate protein J-like IM40_09550 e072ac02a2a298a3e41c7bb0bf1a49f9 287 PIRSF PIRSF020481 7 272 1.4E-50 T 14-10-2018 IPR014507 Baseplate assembly protein J, predicted IM40_07830 1c4bc6b634a7f2167ef965d7e51d5f97 69 SUPERFAMILY SSF46955 5 54 3.11E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 SMART SM00411 1 89 2.1E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 SUPERFAMILY SSF47729 1 89 2.36E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 Gene3D G3DSA:4.10.520.10 1 90 4.1E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IM40_10615 43a2dbb5fca6aee0ed1397cc9351cf5f 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 5.3E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IM40_00985 5e33ea1caeddfac03a7b4934f298a6b7 388 SUPERFAMILY SSF53335 123 264 1.59E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_00985 5e33ea1caeddfac03a7b4934f298a6b7 388 Gene3D G3DSA:3.40.50.150 79 283 7.6E-18 T 14-10-2018 IM40_00985 5e33ea1caeddfac03a7b4934f298a6b7 388 Pfam PF13489 Methyltransferase domain 134 261 1.5E-9 T 14-10-2018 IM40_11460 81d1fd050833698c00b547b1c5af08b1 361 Gene3D G3DSA:3.30.930.30 2 218 1.1E-35 T 14-10-2018 IM40_11460 81d1fd050833698c00b547b1c5af08b1 361 Pfam PF03389 MobA/MobL family 110 180 1.0E-7 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11460 81d1fd050833698c00b547b1c5af08b1 361 Pfam PF03389 MobA/MobL family 185 235 6.9E-6 T 14-10-2018 IPR005053 MobA/MobL protein IM40_11460 81d1fd050833698c00b547b1c5af08b1 361 Pfam PF03389 MobA/MobL family 17 80 2.7E-12 T 14-10-2018 IPR005053 MobA/MobL protein IM40_02190 cf9d7fc376da74a474c3e0d7f55c2410 110 Pfam PF06412 Conjugal transfer protein TraD 23 95 1.1E-7 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 IM40_02720 0840018d20379b5ea073f5c66a1b72c1 705 TIGRFAM TIGR04141 TIGR04141: sporadically distributed protein, TIGR04141 family 3 149 9.3E-15 T 14-10-2018 IPR026487 Sporadically distributed protein CHP04141 IM40_01205 59a407f33e62a130fb910a2f425ce80c 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.2E-33 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 IM40_01205 59a407f33e62a130fb910a2f425ce80c 64 SUPERFAMILY SSF140319 1 62 5.62E-26 T 14-10-2018 IPR036762 IscX-like superfamily IM40_01205 59a407f33e62a130fb910a2f425ce80c 64 Gene3D G3DSA:1.10.10.600 1 64 2.6E-28 T 14-10-2018 IPR036762 IscX-like superfamily IM40_01205 59a407f33e62a130fb910a2f425ce80c 64 PIRSF PIRSF039003 1 64 3.7E-33 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 IM40_01205 59a407f33e62a130fb910a2f425ce80c 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 5.2E-31 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 IM40_10540 5f4a6ce0071795aaa9769ffbeeca9869 70 Pfam PF11753 Protein of unknwon function (DUF3310) 1 56 7.1E-15 T 14-10-2018 IPR021739 SaV-like IM40_10730 c290b7a4068f11088a7bd703a452f71d 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 289 8.4E-26 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 IM40_10730 c290b7a4068f11088a7bd703a452f71d 334 Pfam PF01548 Transposase 6 146 4.9E-20 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 IM40_01575 a03452cb54dcee53f46f93f1c25c0a2d 243 SUPERFAMILY SSF53335 21 198 2.72E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IM40_01575 a03452cb54dcee53f46f93f1c25c0a2d 243 Gene3D G3DSA:3.40.50.150 9 173 8.9E-11 T 14-10-2018 IM40_00945 1380919cbdb1ca709c8ab87171bc3d73 163 Pfam PF11233 Protein of unknown function (DUF3035) 28 160 3.6E-24 T 14-10-2018 IPR021395 Protein of unknown function DUF3035 IM40_03495 95cddba03be72f56aacad480c68a6d0d 397 Gene3D G3DSA:3.40.50.300 134 377 1.6E-38 T 14-10-2018 IM40_03495 95cddba03be72f56aacad480c68a6d0d 397 Pfam PF00072 Response regulator receiver domain 10 116 1.2E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IM40_03495 95cddba03be72f56aacad480c68a6d0d 397 Pfam PF13614 AAA domain 137 304 5.2E-9 T 14-10-2018 IPR025669 AAA domain IM40_03495 95cddba03be72f56aacad480c68a6d0d 397 SUPERFAMILY SSF52172 10 120 3.98E-10 T 14-10-2018 IPR011006 CheY-like superfamily IM40_03495 95cddba03be72f56aacad480c68a6d0d 397 Gene3D G3DSA:3.40.50.2300 3 124 4.8E-32 T 14-10-2018 IM40_03495 95cddba03be72f56aacad480c68a6d0d 397 SUPERFAMILY SSF52540 137 377 2.15E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_09930 3273694f92382194eb6890bdc1143aeb 279 Pfam PF02498 BRO family, N-terminal domain 13 108 1.8E-11 T 14-10-2018 IPR003497 BRO N-terminal domain IM40_09930 3273694f92382194eb6890bdc1143aeb 279 SMART SM01040 13 112 4.0E-23 T 14-10-2018 IPR003497 BRO N-terminal domain IM40_01895 f1b758194d7f35872c27a04554c54378 303 SUPERFAMILY SSF103481 202 296 1.57E-13 T 14-10-2018 IM40_01895 f1b758194d7f35872c27a04554c54378 303 Pfam PF00892 EamA-like transporter family 26 156 1.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_01895 f1b758194d7f35872c27a04554c54378 303 Pfam PF00892 EamA-like transporter family 166 295 4.0E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_01895 f1b758194d7f35872c27a04554c54378 303 SUPERFAMILY SSF103481 59 158 9.02E-19 T 14-10-2018 IM40_03740 d84eda7099dad1523995e09b259fef53 69 Pfam PF04070 Domain of unknown function (DUF378) 10 64 7.2E-20 T 14-10-2018 IPR007211 Protein of unknown function DUF378 IM40_08515 825b3c6c806ebb50d50f1820639c02ff 251 SUPERFAMILY SSF81383 27 73 2.22E-5 T 14-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 IM40_01780 f7aab63d7fee5104971fac01a5af52a3 211 PIRSF PIRSF006324 7 211 1.7E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IM40_01780 f7aab63d7fee5104971fac01a5af52a3 211 Pfam PF01810 LysE type translocator 21 209 2.0E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IM40_08390 3353af64f9d9d532b1f99ebb2edb3923 491 Pfam PF02661 Fic/DOC family 354 409 6.5E-14 T 14-10-2018 IPR003812 Fido domain IM40_08390 3353af64f9d9d532b1f99ebb2edb3923 491 SUPERFAMILY SSF140931 351 456 1.57E-19 T 14-10-2018 IPR036597 Fido-like domain superfamily IM40_11335 c4ebc6c613b9354d3a32101255a53f3b 190 SUPERFAMILY SSF48371 26 146 1.08E-7 T 14-10-2018 IPR016024 Armadillo-type fold IM40_10550 3e90e0a6b15ae958f40452cf5f220223 299 SUPERFAMILY SSF103481 45 146 9.02E-13 T 14-10-2018 IM40_10550 3e90e0a6b15ae958f40452cf5f220223 299 Pfam PF00892 EamA-like transporter family 155 281 2.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_10550 3e90e0a6b15ae958f40452cf5f220223 299 Pfam PF00892 EamA-like transporter family 13 142 8.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IM40_10550 3e90e0a6b15ae958f40452cf5f220223 299 SUPERFAMILY SSF103481 190 284 1.57E-7 T 14-10-2018 IM40_10735 931ce5bf2784d46fa0b1815cb48afa09 445 TIGRFAM TIGR04141 TIGR04141: sporadically distributed protein, TIGR04141 family 6 264 2.3E-37 T 14-10-2018 IPR026487 Sporadically distributed protein CHP04141 IM40_07725 da4627f649d3ba3fcd9083eefc6caf59 278 Pfam PF06230 Protein of unknown function (DUF1009) 62 272 3.2E-65 T 14-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 IM40_07725 da4627f649d3ba3fcd9083eefc6caf59 278 Gene3D G3DSA:3.40.140.80 136 278 6.7E-49 T 14-10-2018 IM40_07725 da4627f649d3ba3fcd9083eefc6caf59 278 Gene3D G3DSA:3.40.50.20 4 134 5.5E-40 T 14-10-2018 IM40_05315 9befb4a614771c242cd99172590e4094 282 Gene3D G3DSA:1.20.120.1200 4 146 1.4E-27 T 14-10-2018 IM40_05315 9befb4a614771c242cd99172590e4094 282 Gene3D G3DSA:1.20.120.1200 147 248 1.2E-12 T 14-10-2018 IM40_05315 9befb4a614771c242cd99172590e4094 282 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 246 9.1E-30 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IM40_07365 12cf1155c3ea055a0c1478a464aed456 148 Pfam PF15565 Immunity protein 30 11 104 2.4E-17 T 14-10-2018 IPR029084 Immunity protein 30 IM40_10065 92c43fa4ac71af6f3c2c671ed2e27325 348 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 53 232 5.9E-7 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 IM40_03950 f0a5a2697e549f0537611b7be04538f1 414 Pfam PF01757 Acyltransferase family 9 399 2.7E-21 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 IM40_06795 a809b17a5d9ddeeb44b09e85edc4e793 379 Pfam PF06727 Protein of unknown function (DUF1207) 125 375 2.6E-54 T 14-10-2018 IPR009599 Protein of unknown function DUF1207 IM40_05015 ff66f7a726de27c4dd0d913b46fdadef 154 Pfam PF09361 Phasin protein 38 128 3.5E-11 T 14-10-2018 IPR018968 Phasin IM40_04945 56a4ebe7f7c7b0fcae0ef919f5edf345 179 Pfam PF06242 Protein of unknown function (DUF1013) 34 169 1.4E-53 T 14-10-2018 IPR010421 Protein of unknown function DUF1013 IM40_03230 813a09608f6111c32d5f159dd692f45e 506 SUPERFAMILY SSF81901 296 358 2.22E-5 T 14-10-2018 IM40_03230 813a09608f6111c32d5f159dd692f45e 506 Gene3D G3DSA:1.25.40.10 258 470 6.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IM40_10465 9e0065d71fb8ee2aced4b3cd1e4e1889 117 Pfam PF13610 DDE domain 37 87 1.0E-20 T 14-10-2018 IPR032874 DDE domain IM40_08495 d5c0c8c62927a934db07ba2117fa745c 269 Gene3D G3DSA:1.10.510.10 9 165 2.8E-5 T 14-10-2018 IM40_11005 e6bf7888b4c2c75dc67254a96aedd28b 480 Pfam PF01637 ATPase domain predominantly from Archaea 6 215 1.1E-14 T 14-10-2018 IPR011579 ATPase domain GO:0005524 IM40_11005 e6bf7888b4c2c75dc67254a96aedd28b 480 SUPERFAMILY SSF52540 2 249 2.97E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IM40_11005 e6bf7888b4c2c75dc67254a96aedd28b 480 Gene3D G3DSA:3.40.50.300 1 176 2.2E-26 T 14-10-2018 IM40_05775 d45b5cb32d98f2a1e410b375eeab40f7 320 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 129 313 1.7E-17 T 14-10-2018 IPR026337 HEXXH motif domain IM40_07785 04049687ffdae7d87a8dd49d467516ef 148 Pfam PF02308 MgtC family 15 129 7.6E-35 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IM40_07785 04049687ffdae7d87a8dd49d467516ef 148 PRINTS PR01837 MgtC/SapB protein signature 37 55 3.2E-38 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IM40_07785 04049687ffdae7d87a8dd49d467516ef 148 PRINTS PR01837 MgtC/SapB protein signature 62 84 3.2E-38 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IM40_07785 04049687ffdae7d87a8dd49d467516ef 148 PRINTS PR01837 MgtC/SapB protein signature 18 37 3.2E-38 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IM40_07785 04049687ffdae7d87a8dd49d467516ef 148 PRINTS PR01837 MgtC/SapB protein signature 89 113 3.2E-38 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IM40_11445 80e3077e0b79fca20f60f2cc4b2a166c 129 Pfam PF13438 Domain of unknown function (DUF4113) 78 128 1.1E-17 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 IM40_03075 b9faf5000f4d332cb4da8dce5afd183c 282 Gene3D G3DSA:3.30.1150.10 151 282 9.3E-14 T 14-10-2018 IM40_08625 f0729dd4a4eed6285c5a4f62540d6db6 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 360 2.9E-52 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 IM40_02690 2831d1ac1312149ef409863716fb193a 267 Pfam PF01609 Transposase DDE domain 122 251 2.2E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IM40_02690 2831d1ac1312149ef409863716fb193a 267 Pfam PF05598 Transposase domain (DUF772) 1 60 1.4E-15 T 14-10-2018 IPR008490 Transposase InsH, N-terminal IM40_04590 f95ab87747b83740dc44c91c313cd1c9 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 282 2.7E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 IM40_08460 c6337f10dbeedbdec7b49bee3953ecaa 68 Gene3D G3DSA:3.30.870.10 1 53 2.6E-9 T 14-10-2018 IM40_08460 c6337f10dbeedbdec7b49bee3953ecaa 68 SUPERFAMILY SSF56024 2 43 2.2E-6 T 14-10-2018 IM40_07940 3186b6220b29659efbf37db26d3a6e42 928 Pfam PF07916 TraG-like protein, N-terminal region 4 464 7.9E-87 T 14-10-2018 IPR012931 TraG-like, N-terminal IM40_10035 65f4057f6935c8b76b73355f2cf31d0a 70 Pfam PF11753 Protein of unknwon function (DUF3310) 1 56 8.4E-15 T 14-10-2018 IPR021739 SaV-like IM40_04660 72c3fe8e549c648277b9534b1cdf4460 232 Pfam PF02674 Colicin V production protein 14 154 1.5E-21 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 IM40_09320 c8e84d60a8dcf5a015bcfc271524480e 107 SUPERFAMILY SSF142921 6 68 9.55E-6 T 14-10-2018 IPR036930 WGR domain superfamily IM40_03305 a53210a199021bcd83ffc783eeda0ef1 443 Pfam PF03553 Na+/H+ antiporter family 24 218 2.3E-11 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 IM40_11055 4c9fec02b7c4687049fdb581a06085e8 128 Pfam PF06412 Conjugal transfer protein TraD 28 88 8.9E-8 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 IM40_01945 1f64a3d2143c5d5bc3479eee13314272 978 Pfam PF05170 AsmA family 1 854 6.6E-56 T 14-10-2018 IPR007844 AsmA IM40_00965 4b92bf5337ecc06c6fca04a7a4c8d7ca 318 Pfam PF06258 Mitochondrial fission ELM1 14 312 4.0E-96 T 14-10-2018 IPR009367 Mitochondrial fission protein ELM1-like IM40_10590 e6170ed0c7aba464908e8bbec044a6d6 95 SUPERFAMILY SSF47598 44 86 3.78E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 IM40_11470 16ad8be7ecd69e54c71a0048d7a337ba 121 Pfam PF06412 Conjugal transfer protein TraD 26 89 1.2E-8 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 IM40_04805 6aca7fe408e71eda5079de102d11dfce 146 Pfam PF05443 ROS/MUCR transcriptional regulator protein 17 137 1.6E-46 T 14-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 IM40_04805 6aca7fe408e71eda5079de102d11dfce 146 Gene3D G3DSA:1.10.10.1550 64 120 4.1E-30 T 14-10-2018 IM40_02365 fe9bc9c452be8e112bccc83a4f9de3de 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 72 5.2E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM IM40_02365 fe9bc9c452be8e112bccc83a4f9de3de 82 SUPERFAMILY SSF143120 11 68 1.7E-7 T 14-10-2018 IPR036165 YefM-like superfamily IM40_02275 40f44a08ce28a7ee975f4846c91806d1 173 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 53 161 1.5E-27 T 14-10-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup IM40_02275 40f44a08ce28a7ee975f4846c91806d1 173 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 55 151 4.9E-23 T 14-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC IM40_00300 27aa8f7b1671e62cbfb267f2451ae191 229 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 65 208 3.5E-9 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related IM40_05830 fa6f235adf50c100340f6097b84aae91 88 Pfam PF13683 Integrase core domain 19 82 4.9E-24 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IM40_05830 fa6f235adf50c100340f6097b84aae91 88 SUPERFAMILY SSF53098 2 81 5.77E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily IM40_08285 0a476f4922ca493574a9cb93b0efb014 188 Pfam PF01526 Tn3 transposase DDE domain 2 138 1.8E-41 T 14-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 IM40_03195 a650350b6057a83949d63b99a32d16ce 307 Pfam PF09991 Predicted membrane protein (DUF2232) 17 295 4.3E-20 T 14-10-2018 IPR018710 Protein of unknown function DUF2232 IM40_05875 e28778e18805d286d0f2c6dde8193cbb 1097 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 783 862 2.2E-17 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 IM40_05875 e28778e18805d286d0f2c6dde8193cbb 1097 Gene3D G3DSA:2.180.10.10 405 862 9.4E-32 T 14-10-2018 IM40_05175 bcf690e1a7bce1f46e5239d3239ebe81 184 Pfam PF11188 Protein of unknown function (DUF2975) 76 184 1.7E-9 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 IM40_04645 cf42c9a10dca07aaf3f7f9b601a483e6 258 Pfam PF02405 Permease MlaE 43 253 2.1E-80 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 IM40_04645 cf42c9a10dca07aaf3f7f9b601a483e6 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 41 256 5.7E-75 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IM40_09620 912e65434d28fa2338cffe0911780ff7 347 Pfam PF06250 Protein of unknown function (DUF1016) 3 334 5.6E-110 T 14-10-2018 IPR009362 Protein of unknown function DUF1016 IM40_06775 f63606706d8e110f1697d610e62b292b 117 Pfam PF14107 Domain of unknown function (DUF4280) 5 110 2.2E-14 T 14-10-2018 IPR025460 Protein of unknown function DUF4280 IM40_05900 78fea58ac51a1362817a9c74ac662ce3 362 Gene3D G3DSA:1.20.910.10 170 361 9.8E-12 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IM40_03340 d2da1186deded2fb21f7692ee370d1d8 137 Pfam PF06935 Protein of unknown function (DUF1284) 19 121 3.7E-23 T 14-10-2018 IPR009702 Protein of unknown function DUF1284 IM40_03235 79e7051baf37b4b1d595581fa1124f75 120 Pfam PF00477 Small hydrophilic plant seed protein 4 54 1.2E-11 T 14-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup IM40_03235 79e7051baf37b4b1d595581fa1124f75 120 Pfam PF00477 Small hydrophilic plant seed protein 72 117 2.8E-16 T 14-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup IM40_05870 b247444a9cbf68479b5472c1e1d7c470 2424 SUPERFAMILY SSF101898 2114 2257 1.18E-5 T 14-10-2018 IM40_06040 a12dfd038ff8c079fd39096b60085fa9 122 Pfam PF11367 Protein of unknown function (DUF3168) 8 115 7.1E-8 T 14-10-2018 IPR021508 Tail completion protein IM40_06770 27cb00ca5a1f92772263a4a968020941 87 Pfam PF06233 Usg-like family 7 80 4.1E-37 T 14-10-2018 IPR009354 Usg-like IM40_05590 137e3a20af7dc6493e28b0b0597d7c53 230 Pfam PF02104 SURF1 family 18 217 6.7E-31 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IM40_03955 8e79a53996850a1ceab07c31840f8784 415 Pfam PF01757 Acyltransferase family 8 400 8.8E-19 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 IM40_06610 2f64c2b5d08a73bbc8d3e99e5cef4b39 160 Pfam PF02470 MlaD protein 36 113 4.5E-19 T 14-10-2018 IPR003399 Mce/MlaD IM40_06610 2f64c2b5d08a73bbc8d3e99e5cef4b39 160 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 144 1.2E-41 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 IM40_09635 35abf6485c771a7cbd3e615b0e97fe1a 637 SUPERFAMILY SSF56281 147 414 1.34E-8 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IM40_10260 26061e60e2a84feba7fd2ee75c7232ba 236 Pfam PF13610 DDE domain 75 201 1.0E-27 T 14-10-2018 IPR032874 DDE domain IM40_08940 ca0fac8e3753817ed51d9a98a7822e54 81 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 18 39 1.3E-9 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat IM40_00730 3fdc39e89a4ac48a7ce77d8e0d9b06b6 85 Pfam PF00477 Small hydrophilic plant seed protein 24 81 5.7E-14 T 14-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup