locus-tag class description Rmag_0001 PF08299 Bacterial dnaA protein helix-turn-helix Rmag_0001 PF00308 Bacterial dnaA protein Rmag_0001 PF11638 DnaA N-terminal domain Rmag_0002 PF02767 DNA polymerase III beta subunit, central domain Rmag_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Rmag_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Rmag_0003 PF01751 Toprim domain Rmag_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Rmag_0003 PF18053 DNA gyrase B subunit insert domain Rmag_0003 PF00986 DNA gyrase B subunit, carboxyl terminus Rmag_0003 PF00204 DNA gyrase B Rmag_0004 PF00485 Phosphoribulokinase / Uridine kinase family Rmag_0005 PF13603 Leucyl-tRNA synthetase, Domain 2 Rmag_0005 PF00133 tRNA synthetases class I (I, L, M and V) Rmag_0005 PF08264 Anticodon-binding domain of tRNA Rmag_0006 PF01180 Dihydroorotate dehydrogenase Rmag_0008 PF02798 Glutathione S-transferase, N-terminal domain Rmag_0008 PF00043 Glutathione S-transferase, C-terminal domain Rmag_0009 PF02167 Cytochrome C1 family Rmag_0010 PF00032 Cytochrome b(C-terminal)/b6/petD Rmag_0010 PF00033 Cytochrome b/b6/petB Rmag_0011 PF00355 Rieske [2Fe-2S] domain Rmag_0011 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Rmag_0013 PF02810 SEC-C motif Rmag_0013 PF07517 SecA DEAD-like domain Rmag_0013 PF07516 SecA Wing and Scaffold domain Rmag_0013 PF01043 SecA preprotein cross-linking domain Rmag_0014 PF03702 Anhydro-N-acetylmuramic acid kinase Rmag_0015 PF01979 Amidohydrolase family Rmag_0016 PF01687 Riboflavin kinase Rmag_0016 PF06574 FAD synthetase Rmag_0018 PF04204 Homoserine O-succinyltransferase Rmag_0020 PF00155 Aminotransferase class I and II Rmag_0021 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Rmag_0023 PF01259 SAICAR synthetase Rmag_0024 PF08525 Opacity-associated protein A N-terminal motif Rmag_0024 PF01476 LysM domain Rmag_0024 PF01551 Peptidase family M23 Rmag_0025 PF13288 DXP reductoisomerase C-terminal domain Rmag_0025 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Rmag_0025 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Rmag_0027 PF01255 Putative undecaprenyl diphosphate synthase Rmag_0028 PF00977 Histidine biosynthesis protein Rmag_0030 PF01040 UbiA prenyltransferase family Rmag_0034 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Rmag_0034 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Rmag_0035 PF00115 Cytochrome C and Quinol oxidase polypeptide I Rmag_0036 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Rmag_0037 PF00510 Cytochrome c oxidase subunit III Rmag_0039 PF00115 Cytochrome C and Quinol oxidase polypeptide I Rmag_0041 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Rmag_0041 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Rmag_0043 PF09397 Ftsk gamma domain Rmag_0043 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Rmag_0043 PF17854 FtsK alpha domain Rmag_0043 PF01580 FtsK/SpoIIIE family Rmag_0044 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_0045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Rmag_0045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Rmag_0046 PF03652 Holliday junction resolvase Rmag_0047 PF13406 Transglycosylase SLT domain Rmag_0048 PF02424 ApbE family Rmag_0050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Rmag_0051 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Rmag_0051 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Rmag_0052 PF02576 RimP N-terminal domain Rmag_0052 PF17384 RimP C-terminal SH3 domain Rmag_0053 PF13184 NusA-like KH domain Rmag_0053 PF08529 NusA N-terminal domain Rmag_0053 PF00575 S1 RNA binding domain Rmag_0054 PF04760 Translation initiation factor IF-2, N-terminal region Rmag_0054 PF11987 Translation-initiation factor 2 Rmag_0054 PF00009 Elongation factor Tu GTP binding domain Rmag_0055 PF02033 Ribosome-binding factor A Rmag_0056 PF01509 TruB family pseudouridylate synthase (N terminal domain) Rmag_0056 PF16198 tRNA pseudouridylate synthase B C-terminal domain Rmag_0056 PF09157 Pseudouridine synthase II TruB, C-terminal Rmag_0057 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Rmag_0057 PF02843 Phosphoribosylglycinamide synthetase, C domain Rmag_0057 PF02844 Phosphoribosylglycinamide synthetase, N domain Rmag_0059 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Rmag_0061 PF01121 Dephospho-CoA kinase Rmag_0062 PF02779 Transketolase, pyrimidine binding domain Rmag_0062 PF02780 Transketolase, C-terminal domain Rmag_0062 PF00456 Transketolase, thiamine diphosphate binding domain Rmag_0063 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Rmag_0063 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Rmag_0065 PF00162 Phosphoglycerate kinase Rmag_0066 PF00224 Pyruvate kinase, barrel domain Rmag_0066 PF02887 Pyruvate kinase, alpha/beta domain Rmag_0067 PF01116 Fructose-bisphosphate aldolase class-II Rmag_0068 PF13932 GidA associated domain Rmag_0068 PF01134 Glucose inhibited division protein A Rmag_0069 PF02527 rRNA small subunit methyltransferase G Rmag_0071 PF01026 TatD related DNase Rmag_0072 PF01479 S4 domain Rmag_0072 PF00849 RNA pseudouridylate synthase Rmag_0073 PF01040 UbiA prenyltransferase family Rmag_0074 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Rmag_0074 PF14602 Hexapeptide repeat of succinyl-transferase Rmag_0074 PF00132 Bacterial transferase hexapeptide (six repeats) Rmag_0075 PF13746 4Fe-4S dicluster domain Rmag_0075 PF12801 4Fe-4S binding domain Rmag_0075 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Rmag_0077 PF00005 ABC transporter Rmag_0078 PF01612 3'-5' exonuclease Rmag_0078 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Rmag_0078 PF01367 5'-3' exonuclease, C-terminal SAM fold Rmag_0078 PF00476 DNA polymerase family A Rmag_0079 PF00750 tRNA synthetases class I (R) Rmag_0079 PF05746 DALR anticodon binding domain Rmag_0079 PF03485 Arginyl tRNA synthetase N terminal domain Rmag_0080 PF13361 UvrD-like helicase C-terminal domain Rmag_0080 PF00580 UvrD/REP helicase N-terminal domain Rmag_0080 PF12705 PD-(D/E)XK nuclease superfamily Rmag_0082 PF02581 Thiamine monophosphate synthase Rmag_0085 PF14306 PUA-like domain Rmag_0085 PF01747 ATP-sulfurylase Rmag_0087 PF13187 4Fe-4S dicluster domain Rmag_0087 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit Rmag_0088 PF00890 FAD binding domain Rmag_0090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Rmag_0092 PF03030 Inorganic H+ pyrophosphatase Rmag_0093 PF05191 Adenylate kinase, active site lid Rmag_0094 PF00365 Phosphofructokinase Rmag_0097 PF01406 tRNA synthetases class I (C) catalytic domain Rmag_0097 PF09190 DALR domain Rmag_0098 PF10417 C-terminal domain of 1-Cys peroxiredoxin Rmag_0098 PF00578 AhpC/TSA family Rmag_0099 PF00180 Isocitrate/isopropylmalate dehydrogenase Rmag_0101 PF00293 NUDIX domain Rmag_0103 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Rmag_0103 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Rmag_0105 PF02684 Lipid-A-disaccharide synthetase Rmag_0106 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Rmag_0106 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Rmag_0107 PF00459 Inositol monophosphatase family Rmag_0108 PF04545 Sigma-70, region 4 Rmag_0108 PF04539 Sigma-70 region 3 Rmag_0108 PF04542 Sigma-70 region 2 Rmag_0108 PF04546 Sigma-70, non-essential region Rmag_0108 PF03979 Sigma-70 factor, region 1.1 Rmag_0108 PF00140 Sigma-70 factor, region 1.2 Rmag_0109 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Rmag_0109 PF14572 Phosphoribosyl synthetase-associated domain Rmag_0110 PF00288 GHMP kinases N terminal domain Rmag_0111 PF00929 Exonuclease Rmag_0112 PF02885 Glycosyl transferase family, helical bundle domain Rmag_0112 PF00591 Glycosyl transferase family, a/b domain Rmag_0113 PF05195 Aminopeptidase P, N-terminal domain Rmag_0113 PF00557 Metallopeptidase family M24 Rmag_0116 PF03807 NADP oxidoreductase coenzyme F420-dependent Rmag_0116 PF14748 Pyrroline-5-carboxylate reductase dimerisation Rmag_0117 PF13419 Haloacid dehalogenase-like hydrolase Rmag_0118 PF00202 Aminotransferase class-III Rmag_0120 PF17764 3′ DNA-binding domain (3′BD) Rmag_0120 PF18074 Primosomal protein N C-terminal domain Rmag_0120 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Rmag_0120 PF00271 Helicase conserved C-terminal domain Rmag_0120 PF00270 DEAD/DEAH box helicase Rmag_0121 PF02130 Uncharacterized protein family UPF0054 Rmag_0122 PF09179 TilS substrate binding domain Rmag_0122 PF11734 TilS substrate C-terminal domain Rmag_0122 PF01171 PP-loop family Rmag_0123 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Rmag_0124 PF01865 Protein of unknown function DUF47 Rmag_0125 PF01384 Phosphate transporter family Rmag_0126 PF01722 BolA-like protein Rmag_0127 PF00270 DEAD/DEAH box helicase Rmag_0127 PF00271 Helicase conserved C-terminal domain Rmag_0129 PF03062 MBOAT, membrane-bound O-acyltransferase family Rmag_0132 PF00579 tRNA synthetases class I (W and Y) Rmag_0132 PF01479 S4 domain Rmag_0133 PF00171 Aldehyde dehydrogenase family Rmag_0136 PF00004 ATPase family associated with various cellular activities (AAA) Rmag_0136 PF17862 AAA+ lid domain Rmag_0136 PF06480 FtsH Extracellular Rmag_0136 PF01434 Peptidase family M41 Rmag_0137 PF00809 Pterin binding enzyme Rmag_0138 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Rmag_0138 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Rmag_0138 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Rmag_0138 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Rmag_0139 PF02508 Rnf-Nqr subunit, membrane protein Rmag_0140 PF04060 Putative Fe-S cluster Rmag_0141 PF13375 RnfC Barrel sandwich hybrid domain Rmag_0141 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Rmag_0141 PF10531 SLBB domain Rmag_0141 PF12838 4Fe-4S dicluster domain Rmag_0142 PF03116 NQR2, RnfD, RnfE family Rmag_0143 PF04205 FMN-binding domain Rmag_0145 PF00549 CoA-ligase Rmag_0145 PF02629 CoA binding domain Rmag_0146 PF08442 ATP-grasp domain Rmag_0146 PF00549 CoA-ligase Rmag_0147 PF09285 Elongation factor P, C-terminal Rmag_0147 PF08207 Elongation factor P (EF-P) KOW-like domain Rmag_0147 PF01132 Elongation factor P (EF-P) OB domain Rmag_0148 PF00152 tRNA synthetases class II (D, K and N) Rmag_0151 PF00764 Arginosuccinate synthase Rmag_0152 PF01066 CDP-alcohol phosphatidyltransferase Rmag_0153 PF01225 Mur ligase family, catalytic domain Rmag_0153 PF08245 Mur ligase middle domain Rmag_0153 PF02875 Mur ligase family, glutamate ligase domain Rmag_0155 PF08245 Mur ligase middle domain Rmag_0155 PF02875 Mur ligase family, glutamate ligase domain Rmag_0155 PF01225 Mur ligase family, catalytic domain Rmag_0156 PF02872 5'-nucleotidase, C-terminal domain Rmag_0156 PF00149 Calcineurin-like phosphoesterase Rmag_0158 PF00571 CBS domain Rmag_0158 PF01380 SIS domain Rmag_0159 PF01451 Low molecular weight phosphotyrosine protein phosphatase Rmag_0160 PF00164 Ribosomal protein S12/S23 Rmag_0161 PF00177 Ribosomal protein S7p/S5e Rmag_0162 PF00679 Elongation factor G C-terminus Rmag_0162 PF03144 Elongation factor Tu domain 2 Rmag_0162 PF14492 Elongation Factor G, domain II Rmag_0162 PF03764 Elongation factor G, domain IV Rmag_0162 PF00009 Elongation factor Tu GTP binding domain Rmag_0163 PF00009 Elongation factor Tu GTP binding domain Rmag_0163 PF03143 Elongation factor Tu C-terminal domain Rmag_0163 PF03144 Elongation factor Tu domain 2 Rmag_0164 PF00338 Ribosomal protein S10p/S20e Rmag_0165 PF00297 Ribosomal protein L3 Rmag_0166 PF00573 Ribosomal protein L4/L1 family Rmag_0167 PF00276 Ribosomal protein L23 Rmag_0168 PF00181 Ribosomal Proteins L2, RNA binding domain Rmag_0168 PF03947 Ribosomal Proteins L2, C-terminal domain Rmag_0169 PF00203 Ribosomal protein S19 Rmag_0170 PF00237 Ribosomal protein L22p/L17e Rmag_0171 PF07650 KH domain Rmag_0171 PF00189 Ribosomal protein S3, C-terminal domain Rmag_0172 PF00252 Ribosomal protein L16p/L10e Rmag_0173 PF00831 Ribosomal L29 protein Rmag_0174 PF00366 Ribosomal protein S17 Rmag_0175 PF00238 Ribosomal protein L14p/L23e Rmag_0176 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Rmag_0176 PF00467 KOW motif Rmag_0177 PF00673 ribosomal L5P family C-terminus Rmag_0177 PF00281 Ribosomal protein L5 Rmag_0178 PF00253 Ribosomal protein S14p/S29e Rmag_0179 PF00410 Ribosomal protein S8 Rmag_0180 PF00347 Ribosomal protein L6 Rmag_0181 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Rmag_0182 PF03719 Ribosomal protein S5, C-terminal domain Rmag_0182 PF00333 Ribosomal protein S5, N-terminal domain Rmag_0183 PF00327 Ribosomal protein L30p/L7e Rmag_0184 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Rmag_0185 PF00344 SecY translocase Rmag_0186 PF00444 Ribosomal protein L36 Rmag_0187 PF00416 Ribosomal protein S13/S18 Rmag_0188 PF00411 Ribosomal protein S11 Rmag_0189 PF01479 S4 domain Rmag_0189 PF00163 Ribosomal protein S4/S9 N-terminal domain Rmag_0190 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Rmag_0190 PF01000 RNA polymerase Rpb3/RpoA insert domain Rmag_0190 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Rmag_0191 PF01196 Ribosomal protein L17 Rmag_0192 PF01165 Ribosomal protein S21 Rmag_0196 PF01641 SelR domain Rmag_0197 PF01743 Poly A polymerase head domain Rmag_0197 PF12627 Probable RNA and SrmB- binding site of polymerase A Rmag_0200 PF01926 50S ribosome-binding GTPase Rmag_0203 PF00034 Cytochrome c Rmag_0204 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Rmag_0204 PF05698 Bacterial trigger factor protein (TF) C-terminus Rmag_0204 PF05697 Bacterial trigger factor protein (TF) Rmag_0205 PF00574 Clp protease Rmag_0206 PF10431 C-terminal, D2-small domain, of ClpB protein Rmag_0206 PF06689 ClpX C4-type zinc finger Rmag_0206 PF07724 AAA domain (Cdc48 subfamily) Rmag_0207 PF13167 GTP-binding GTPase N-terminal Rmag_0207 PF16360 GTP-binding GTPase Middle Region Rmag_0207 PF01926 50S ribosome-binding GTPase Rmag_0208 PF00004 ATPase family associated with various cellular activities (AAA) Rmag_0208 PF02190 ATP-dependent protease La (LON) substrate-binding domain Rmag_0208 PF05362 Lon protease (S16) C-terminal proteolytic domain Rmag_0209 PF01029 NusB family Rmag_0209 PF01189 16S rRNA methyltransferase RsmB/F Rmag_0210 PF13098 Thioredoxin-like domain Rmag_0210 PF10411 Disulfide bond isomerase protein N-terminus Rmag_0211 PF02789 Cytosol aminopeptidase family, N-terminal domain Rmag_0211 PF00883 Cytosol aminopeptidase family, catalytic domain Rmag_0216 PF07556 Protein of unknown function (DUF1538) Rmag_0217 PF07556 Protein of unknown function (DUF1538) Rmag_0218 PF01063 Amino-transferase class IV Rmag_0220 PF02223 Thymidylate kinase Rmag_0221 PF09115 DNA polymerase III, delta subunit, C terminal Rmag_0222 PF00202 Aminotransferase class-III Rmag_0224 PF13686 DsrE/DsrF/DrsH-like family Rmag_0225 PF01206 Sulfurtransferase TusA Rmag_0227 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Rmag_0228 PF01725 Ham1 family Rmag_0232 PF00696 Amino acid kinase family Rmag_0233 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Rmag_0234 PF01168 Alanine racemase, N-terminal domain Rmag_0236 PF01523 Putative modulator of DNA gyrase Rmag_0237 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Rmag_0238 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Rmag_0239 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Rmag_0240 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Rmag_0242 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Rmag_0242 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Rmag_0242 PF10531 SLBB domain Rmag_0243 PF00384 Molybdopterin oxidoreductase Rmag_0243 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Rmag_0243 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Rmag_0244 PF00146 NADH dehydrogenase Rmag_0245 PF12838 4Fe-4S dicluster domain Rmag_0246 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Rmag_0247 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Rmag_0248 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Rmag_0248 PF00361 Proton-conducting membrane transporter Rmag_0249 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Rmag_0249 PF00361 Proton-conducting membrane transporter Rmag_0250 PF00361 Proton-conducting membrane transporter Rmag_0255 PF00664 ABC transporter transmembrane region Rmag_0255 PF00005 ABC transporter Rmag_0257 PF08241 Methyltransferase domain Rmag_0258 PF01297 Zinc-uptake complex component A periplasmic Rmag_0259 PF08003 Protein of unknown function (DUF1698) Rmag_0261 PF01765 Ribosome recycling factor Rmag_0262 PF00696 Amino acid kinase family Rmag_0263 PF17755 UvrA DNA-binding domain Rmag_0263 PF00005 ABC transporter Rmag_0263 PF17760 UvrA interaction domain Rmag_0265 PF00551 Formyl transferase Rmag_0266 PF00586 AIR synthase related protein, N-terminal domain Rmag_0266 PF02769 AIR synthase related protein, C-terminal domain Rmag_0267 PF01066 CDP-alcohol phosphatidyltransferase Rmag_0268 PF00308 Bacterial dnaA protein Rmag_0270 PF14824 Sirohaem biosynthesis protein central Rmag_0270 PF10414 Sirohaem synthase dimerisation region Rmag_0270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Rmag_0272 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Rmag_0272 PF01578 Cytochrome C assembly protein Rmag_0274 PF01546 Peptidase family M20/M25/M40 Rmag_0274 PF07687 Peptidase dimerisation domain Rmag_0275 PF01746 tRNA (Guanine-1)-methyltransferase Rmag_0276 PF00543 Nitrogen regulatory protein P-II Rmag_0277 PF00909 Ammonium Transporter Family Rmag_0278 PF00701 Dihydrodipicolinate synthetase family Rmag_0280 PF03120 NAD-dependent DNA ligase OB-fold domain Rmag_0280 PF01653 NAD-dependent DNA ligase adenylation domain Rmag_0280 PF00533 BRCA1 C Terminus (BRCT) domain Rmag_0281 PF00543 Nitrogen regulatory protein P-II Rmag_0283 PF00571 CBS domain Rmag_0284 PF03861 ANTAR domain Rmag_0284 PF08376 Nitrate and nitrite sensing Rmag_0285 PF00902 Sec-independent protein translocase protein (TatC) Rmag_0286 PF02416 mttA/Hcf106 family Rmag_0287 PF02416 mttA/Hcf106 family Rmag_0288 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Rmag_0289 PF01502 Phosphoribosyl-AMP cyclohydrolase Rmag_0290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Rmag_0290 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_0292 PF03462 PCRF domain Rmag_0292 PF00472 RF-1 domain Rmag_0293 PF00312 Ribosomal protein S15 Rmag_0294 PF03279 Bacterial lipid A biosynthesis acyltransferase Rmag_0295 PF13662 Toprim domain Rmag_0295 PF01807 CHC2 zinc finger Rmag_0295 PF08278 DNA primase DnaG DnaB-binding Rmag_0295 PF10410 DnaB-helicase binding domain of primase Rmag_0295 PF08275 DNA primase catalytic core, N-terminal domain Rmag_0296 PF00905 Penicillin binding protein transpeptidase domain Rmag_0298 PF01795 MraW methylase family Rmag_0302 PF00521 DNA gyrase/topoisomerase IV, subunit A Rmag_0302 PF03989 DNA gyrase C-terminal domain, beta-propeller Rmag_0304 PF02649 Type I GTP cyclohydrolase folE2 Rmag_0305 PF00793 DAHP synthetase I family Rmag_0306 PF00521 DNA gyrase/topoisomerase IV, subunit A Rmag_0306 PF03989 DNA gyrase C-terminal domain, beta-propeller Rmag_0307 PF16658 Class II release factor RF3, C-terminal domain Rmag_0307 PF00009 Elongation factor Tu GTP binding domain Rmag_0307 PF03144 Elongation factor Tu domain 2 Rmag_0308 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Rmag_0309 PF00953 Glycosyl transferase family 4 Rmag_0309 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Rmag_0310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rmag_0311 PF00037 4Fe-4S binding domain Rmag_0312 PF00266 Aminotransferase class-V Rmag_0313 PF02913 FAD linked oxidases, C-terminal domain Rmag_0313 PF01565 FAD binding domain Rmag_0314 PF01565 FAD binding domain Rmag_0315 PF02754 Cysteine-rich domain Rmag_0315 PF13183 4Fe-4S dicluster domain Rmag_0317 PF07690 Major Facilitator Superfamily Rmag_0318 PF00933 Glycosyl hydrolase family 3 N terminal domain Rmag_0320 PF00580 UvrD/REP helicase N-terminal domain Rmag_0320 PF13361 UvrD-like helicase C-terminal domain Rmag_0322 PF04055 Radical SAM superfamily Rmag_0323 PF08534 Redoxin Rmag_0324 PF03960 ArsC family Rmag_0325 PF02798 Glutathione S-transferase, N-terminal domain Rmag_0325 PF00043 Glutathione S-transferase, C-terminal domain Rmag_0327 PF01467 Cytidylyltransferase-like Rmag_0328 PF00753 Metallo-beta-lactamase superfamily Rmag_0329 PF01479 S4 domain Rmag_0329 PF00849 RNA pseudouridylate synthase Rmag_0332 PF06827 Zinc finger found in FPG and IleRS Rmag_0332 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Rmag_0332 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Rmag_0336 PF03600 Citrate transporter Rmag_0337 PF03309 Type III pantothenate kinase Rmag_0338 PF00579 tRNA synthetases class I (W and Y) Rmag_0339 PF01479 S4 domain Rmag_0339 PF00849 RNA pseudouridylate synthase Rmag_0340 PF08264 Anticodon-binding domain of tRNA Rmag_0340 PF00133 tRNA synthetases class I (I, L, M and V) Rmag_0340 PF06827 Zinc finger found in FPG and IleRS Rmag_0341 PF01761 3-dehydroquinate synthase Rmag_0343 PF02686 Glu-tRNAGln amidotransferase C subunit Rmag_0344 PF01425 Amidase Rmag_0345 PF02637 GatB domain Rmag_0345 PF02934 GatB/GatE catalytic domain Rmag_0346 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Rmag_0347 PF02163 Peptidase family M50 Rmag_0348 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Rmag_0348 PF04073 Aminoacyl-tRNA editing domain Rmag_0348 PF03129 Anticodon binding domain Rmag_0349 PF02666 Phosphatidylserine decarboxylase Rmag_0350 PF01595 Cyclin M transmembrane N-terminal domain Rmag_0350 PF03471 Transporter associated domain Rmag_0350 PF00571 CBS domain Rmag_0351 PF03952 Enolase, N-terminal domain Rmag_0351 PF00113 Enolase, C-terminal TIM barrel domain Rmag_0352 PF01556 DnaJ C terminal domain Rmag_0352 PF00226 DnaJ domain Rmag_0352 PF00684 DnaJ central domain Rmag_0353 PF00012 Hsp70 protein Rmag_0354 PF01467 Cytidylyltransferase-like Rmag_0356 PF00719 Inorganic pyrophosphatase Rmag_0361 PF00989 PAS fold Rmag_0361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Rmag_0361 PF00672 HAMP domain Rmag_0361 PF00512 His Kinase A (phospho-acceptor) domain Rmag_0362 PF00196 Bacterial regulatory proteins, luxR family Rmag_0362 PF00072 Response regulator receiver domain Rmag_0363 PF02254 TrkA-N domain Rmag_0363 PF02080 TrkA-C domain Rmag_0364 PF02386 Cation transport protein Rmag_0365 PF06733 DEAD_2 Rmag_0365 PF13307 Helicase C-terminal domain Rmag_0366 PF00348 Polyprenyl synthetase Rmag_0367 PF01728 FtsJ-like methyltransferase Rmag_0369 PF00873 AcrB/AcrD/AcrF family Rmag_0371 PF00694 Aconitase C-terminal domain Rmag_0372 PF00330 Aconitase family (aconitate hydratase) Rmag_0373 PF00733 Asparagine synthase Rmag_0373 PF13537 Glutamine amidotransferase domain Rmag_0374 PF00075 RNase H Rmag_0378 PF03364 Polyketide cyclase / dehydrase and lipid transport Rmag_0379 PF01668 SmpB protein Rmag_0380 PF00216 Bacterial DNA-binding protein Rmag_0381 PF00334 Nucleoside diphosphate kinase Rmag_0382 PF04055 Radical SAM superfamily Rmag_0384 PF04551 GcpE protein Rmag_0386 PF02780 Transketolase, C-terminal domain Rmag_0386 PF02779 Transketolase, pyrimidine binding domain Rmag_0386 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Rmag_0388 PF05175 Methyltransferase small domain Rmag_0389 PF00462 Glutaredoxin Rmag_0392 PF02769 AIR synthase related protein, C-terminal domain Rmag_0392 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Rmag_0392 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Rmag_0394 PF01709 Transcriptional regulator Rmag_0395 PF02445 Quinolinate synthetase A protein Rmag_0396 PF02938 GAD domain Rmag_0396 PF01336 OB-fold nucleic acid binding domain Rmag_0396 PF00152 tRNA synthetases class II (D, K and N) Rmag_0398 PF00557 Metallopeptidase family M24 Rmag_0399 PF01435 Peptidase family M48 Rmag_0400 PF04011 LemA family Rmag_0404 PF00929 Exonuclease Rmag_0405 PF01192 RNA polymerase Rpb6 Rmag_0409 PF00490 Delta-aminolevulinic acid dehydratase Rmag_0410 PF13667 ThiC-associated domain Rmag_0410 PF01964 Radical SAM ThiC family Rmag_0411 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Rmag_0412 PF01926 50S ribosome-binding GTPase Rmag_0412 PF01018 GTP1/OBG Rmag_0413 PF00696 Amino acid kinase family Rmag_0413 PF01472 PUA domain Rmag_0414 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Rmag_0415 PF02548 Ketopantoate hydroxymethyltransferase Rmag_0416 PF02569 Pantoate-beta-alanine ligase Rmag_0417 PF01106 NifU-like domain Rmag_0419 PF00586 AIR synthase related protein, N-terminal domain Rmag_0419 PF02769 AIR synthase related protein, C-terminal domain Rmag_0420 PF01258 Prokaryotic dksA/traR C4-type zinc finger Rmag_0421 PF13419 Haloacid dehalogenase-like hydrolase Rmag_0423 PF00180 Isocitrate/isopropylmalate dehydrogenase Rmag_0426 PF12344 Ultra-violet resistance protein B Rmag_0426 PF04851 Type III restriction enzyme, res subunit Rmag_0426 PF17757 UvrB interaction domain Rmag_0426 PF00271 Helicase conserved C-terminal domain Rmag_0426 PF02151 UvrB/uvrC motif Rmag_0427 PF04055 Radical SAM superfamily Rmag_0430 PF01264 Chorismate synthase Rmag_0432 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Rmag_0434 PF01243 Pyridoxamine 5'-phosphate oxidase Rmag_0434 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Rmag_0435 PF01488 Shikimate / quinate 5-dehydrogenase Rmag_0435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Rmag_0435 PF08501 Shikimate dehydrogenase substrate binding domain Rmag_0436 PF12111 Polyribonucleotide phosphorylase C terminal Rmag_0436 PF00575 S1 RNA binding domain Rmag_0436 PF10150 Ribonuclease E/G family Rmag_0439 PF02673 Bacitracin resistance protein BacA Rmag_0440 PF01433 Peptidase family M1 domain Rmag_0440 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Rmag_0440 PF11940 Domain of unknown function (DUF3458) Ig-like fold Rmag_0441 PF18146 Damage-inducible protein CinA KH domain Rmag_0441 PF00994 Probable molybdopterin binding domain Rmag_0441 PF02464 Competence-damaged protein Rmag_0442 PF01207 Dihydrouridine synthase (Dus) Rmag_0443 PF02491 SHS2 domain inserted in FTSA Rmag_0444 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Rmag_0445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Rmag_0445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Rmag_0445 PF00205 Thiamine pyrophosphate enzyme, central domain Rmag_0446 PF10369 Small subunit of acetolactate synthase Rmag_0447 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Rmag_0447 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Rmag_0448 PF01066 CDP-alcohol phosphatidyltransferase Rmag_0449 PF00682 HMGL-like Rmag_0449 PF08502 LeuA allosteric (dimerisation) domain Rmag_0452 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Rmag_0452 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Rmag_0453 PF00202 Aminotransferase class-III Rmag_0454 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Rmag_0455 PF00571 CBS domain Rmag_0455 PF01769 Divalent cation transporter Rmag_0455 PF03448 MgtE intracellular N domain Rmag_0456 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Rmag_0456 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Rmag_0456 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Rmag_0456 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Rmag_0458 PF00456 Transketolase, thiamine diphosphate binding domain Rmag_0458 PF17831 Pyruvate dehydrogenase E1 component middle domain Rmag_0461 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Rmag_0461 PF00575 S1 RNA binding domain Rmag_0461 PF03725 3' exoribonuclease family, domain 2 Rmag_0461 PF00013 KH domain Rmag_0461 PF01138 3' exoribonuclease family, domain 1 Rmag_0462 PF00571 CBS domain Rmag_0462 PF00478 IMP dehydrogenase / GMP reductase domain Rmag_0464 PF00133 tRNA synthetases class I (I, L, M and V) Rmag_0464 PF10458 Valyl tRNA synthetase tRNA binding arm Rmag_0464 PF08264 Anticodon-binding domain of tRNA Rmag_0466 PF12169 DNA polymerase III subunits gamma and tau domain III Rmag_0466 PF12170 DNA polymerase III tau subunit V interacting with alpha Rmag_0466 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Rmag_0467 PF00483 Nucleotidyl transferase Rmag_0468 PF01636 Phosphotransferase enzyme family Rmag_0469 PF01063 Amino-transferase class IV Rmag_0470 PF00768 D-alanyl-D-alanine carboxypeptidase Rmag_0470 PF07943 Penicillin-binding protein 5, C-terminal domain Rmag_0471 PF01098 Cell cycle protein Rmag_0474 PF00749 tRNA synthetases class I (E and Q), catalytic domain Rmag_0475 PF08335 GlnD PII-uridylyltransferase Rmag_0475 PF01966 HD domain Rmag_0475 PF01909 Nucleotidyltransferase domain Rmag_0475 PF01842 ACT domain Rmag_0476 PF00085 Thioredoxin Rmag_0477 PF07497 Rho termination factor, RNA-binding domain Rmag_0477 PF07498 Rho termination factor, N-terminal domain Rmag_0477 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Rmag_0479 PF14489 QueF-like protein Rmag_0480 PF12626 Polymerase A arginine-rich C-terminus Rmag_0480 PF12627 Probable RNA and SrmB- binding site of polymerase A Rmag_0480 PF01743 Poly A polymerase head domain Rmag_0481 PF02609 Exonuclease VII small subunit Rmag_0482 PF00348 Polyprenyl synthetase Rmag_0483 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Rmag_0483 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Rmag_0484 PF02504 Fatty acid synthesis protein Rmag_0485 PF01783 Ribosomal L32p protein family Rmag_0488 PF13419 Haloacid dehalogenase-like hydrolase Rmag_0489 PF02646 RmuC family Rmag_0490 PF00106 short chain dehydrogenase Rmag_0491 PF00459 Inositol monophosphatase family Rmag_0492 PF00588 SpoU rRNA Methylase family Rmag_0493 PF00183 Hsp90 protein Rmag_0495 PF01300 Telomere recombination Rmag_0496 PF01218 Coproporphyrinogen III oxidase Rmag_0498 PF03951 Glutamine synthetase, beta-Grasp domain Rmag_0498 PF00120 Glutamine synthetase, catalytic domain Rmag_0499 PF04055 Radical SAM superfamily Rmag_0499 PF06968 Biotin and Thiamin Synthesis associated domain Rmag_0500 PF03033 Glycosyltransferase family 28 N-terminal domain Rmag_0500 PF04101 Glycosyltransferase family 28 C-terminal domain Rmag_0501 PF01098 Cell cycle protein Rmag_0502 PF00005 ABC transporter Rmag_0502 PF12848 ABC transporter Rmag_0504 PF00677 Lumazine binding domain Rmag_0505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Rmag_0505 PF00925 GTP cyclohydrolase II Rmag_0506 PF00885 6,7-dimethyl-8-ribityllumazine synthase Rmag_0507 PF01029 NusB family Rmag_0509 PF01230 HIT domain Rmag_0510 PF00436 Single-strand binding protein family Rmag_0511 PF07690 Major Facilitator Superfamily Rmag_0513 PF04607 Region found in RelA / SpoT proteins Rmag_0513 PF13291 ACT domain Rmag_0513 PF02824 TGS domain Rmag_0514 PF04384 Iron-sulphur cluster assembly Rmag_0515 PF07676 WD40-like Beta Propeller Repeat Rmag_0515 PF04052 TolB amino-terminal domain Rmag_0516 PF00691 OmpA family Rmag_0518 PF04715 Anthranilate synthase component I, N terminal region Rmag_0518 PF00425 chorismate binding enzyme Rmag_0519 PF01914 MarC family integral membrane protein Rmag_0520 PF00795 Carbon-nitrogen hydrolase Rmag_0520 PF02540 NAD synthase Rmag_0522 PF00762 Ferrochelatase Rmag_0523 PF03477 ATP cone domain Rmag_0523 PF00317 Ribonucleotide reductase, all-alpha domain Rmag_0523 PF02867 Ribonucleotide reductase, barrel domain Rmag_0524 PF00268 Ribonucleotide reductase, small chain Rmag_0527 PF00929 Exonuclease Rmag_0529 PF00920 Dehydratase family Rmag_0530 PF00773 RNB domain Rmag_0530 PF00575 S1 RNA binding domain Rmag_0530 PF08461 Ribonuclease R winged-helix domain Rmag_0530 PF17876 Cold shock domain Rmag_0530 PF08206 Ribonuclease B OB domain Rmag_0531 PF00709 Adenylosuccinate synthetase Rmag_0532 PF13393 Histidyl-tRNA synthetase Rmag_0533 PF01145 SPFH domain / Band 7 family Rmag_0534 PF01145 SPFH domain / Band 7 family Rmag_0535 PF04453 LPS transport system D Rmag_0537 PF08032 RNA 2'-O ribose methyltransferase substrate binding Rmag_0537 PF00588 SpoU rRNA Methylase family Rmag_0538 PF00463 Isocitrate lyase family Rmag_0541 PF04359 Protein of unknown function (DUF493) Rmag_0542 PF03099 Biotin/lipoate A/B protein ligase family Rmag_0543 PF04055 Radical SAM superfamily Rmag_0544 PF00873 AcrB/AcrD/AcrF family Rmag_0546 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Rmag_0547 PF00398 Ribosomal RNA adenine dimethylase Rmag_0548 PF04379 ApaG domain Rmag_0549 PF00149 Calcineurin-like phosphoesterase Rmag_0550 PF01678 Diaminopimelate epimerase Rmag_0552 PF17820 PDZ domain Rmag_0552 PF02163 Peptidase family M50 Rmag_0553 PF07244 Surface antigen variable number repeat Rmag_0553 PF01103 Surface antigen Rmag_0554 PF00132 Bacterial transferase hexapeptide (six repeats) Rmag_0554 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Rmag_0555 PF07977 FabA-like domain Rmag_0556 PF00132 Bacterial transferase hexapeptide (six repeats) Rmag_0556 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Rmag_0557 PF03023 Lipid II flippase MurJ Rmag_0558 PF04362 Bacterial Fe(2+) trafficking Rmag_0560 PF04545 Sigma-70, region 4 Rmag_0560 PF04542 Sigma-70 region 2 Rmag_0560 PF00140 Sigma-70 factor, region 1.2 Rmag_0561 PF00166 Chaperonin 10 Kd subunit Rmag_0562 PF00118 TCP-1/cpn60 chaperonin family Rmag_0563 PF00204 DNA gyrase B Rmag_0563 PF01751 Toprim domain Rmag_0563 PF00986 DNA gyrase B subunit, carboxyl terminus Rmag_0563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Rmag_0564 PF06508 Queuosine biosynthesis protein QueC Rmag_0565 PF00550 Phosphopantetheine attachment site Rmag_0566 PF00109 Beta-ketoacyl synthase, N-terminal domain Rmag_0566 PF02801 Beta-ketoacyl synthase, C-terminal domain Rmag_0568 PF01432 Peptidase family M3 Rmag_0570 PF09334 tRNA synthetases class I (M) Rmag_0570 PF08264 Anticodon-binding domain of tRNA Rmag_0571 PF10609 NUBPL iron-transfer P-loop NTPase Rmag_0572 PF00111 2Fe-2S iron-sulfur cluster binding domain Rmag_0573 PF00012 Hsp70 protein Rmag_0574 PF07743 HSCB C-terminal oligomerisation domain Rmag_0575 PF01521 Iron-sulphur cluster biosynthesis Rmag_0576 PF01592 NifU-like N terminal domain Rmag_0577 PF00266 Aminotransferase class-V Rmag_0578 PF02082 Transcriptional regulator Rmag_0579 PF00132 Bacterial transferase hexapeptide (six repeats) Rmag_0580 PF03279 Bacterial lipid A biosynthesis acyltransferase Rmag_0581 PF01171 PP-loop family Rmag_0583 PF01202 Shikimate kinase Rmag_0584 PF01063 Amino-transferase class IV Rmag_0585 PF00696 Amino acid kinase family Rmag_0585 PF13840 ACT domain Rmag_0585 PF01842 ACT domain Rmag_0587 PF01435 Peptidase family M48 Rmag_0589 PF03193 RsgA GTPase Rmag_0590 PF04241 Protein of unknown function (DUF423) Rmag_0591 PF00216 Bacterial DNA-binding protein Rmag_0592 PF00575 S1 RNA binding domain Rmag_0593 PF02224 Cytidylate kinase Rmag_0594 PF01336 OB-fold nucleic acid binding domain Rmag_0594 PF00152 tRNA synthetases class II (D, K and N) Rmag_0595 PF03918 Cytochrome C biogenesis protein Rmag_0597 PF01040 UbiA prenyltransferase family Rmag_0598 PF01541 GIY-YIG catalytic domain Rmag_0598 PF02151 UvrB/uvrC motif Rmag_0598 PF08459 UvrC Helix-hairpin-helix N-terminal Rmag_0600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Rmag_0601 PF01634 ATP phosphoribosyltransferase Rmag_0602 PF00815 Histidinol dehydrogenase Rmag_0604 PF00448 SRP54-type protein, GTPase domain Rmag_0604 PF02978 Signal peptide binding domain Rmag_0604 PF02881 SRP54-type protein, helical bundle domain Rmag_0606 PF06421 GTP-binding protein LepA C-terminus Rmag_0606 PF00009 Elongation factor Tu GTP binding domain Rmag_0606 PF00679 Elongation factor G C-terminus Rmag_0607 PF00578 AhpC/TSA family Rmag_0610 PF01648 4'-phosphopantetheinyl transferase superfamily Rmag_0611 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Rmag_0613 PF01926 50S ribosome-binding GTPase Rmag_0613 PF07650 KH domain Rmag_0614 PF00035 Double-stranded RNA binding motif Rmag_0614 PF14622 Ribonuclease-III-like Rmag_0616 PF00303 Thymidylate synthase Rmag_0617 PF01790 Prolipoprotein diacylglyceryl transferase Rmag_0620 PF03572 Peptidase family S41 Rmag_0620 PF13180 PDZ domain Rmag_0621 PF10502 Signal peptidase, peptidase S26 Rmag_0622 PF04358 DsrC like protein Rmag_0623 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Rmag_0624 PF02153 Prephenate dehydrogenase Rmag_0624 PF01842 ACT domain Rmag_0625 PF00155 Aminotransferase class I and II Rmag_0626 PF01817 Chorismate mutase type II Rmag_0626 PF00800 Prephenate dehydratase Rmag_0626 PF01842 ACT domain Rmag_0627 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Rmag_0627 PF01842 ACT domain Rmag_0627 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Rmag_0628 PF00266 Aminotransferase class-V Rmag_0631 PF03477 ATP cone domain Rmag_0632 PF00464 Serine hydroxymethyltransferase Rmag_0635 PF00899 ThiF family Rmag_0636 PF01625 Peptide methionine sulfoxide reductase Rmag_0639 PF01594 AI-2E family transporter Rmag_0641 PF00216 Bacterial DNA-binding protein Rmag_0643 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Rmag_0643 PF01409 tRNA synthetases class II core domain (F) Rmag_0645 PF00453 Ribosomal protein L20 Rmag_0646 PF01632 Ribosomal protein L35 Rmag_0647 PF00707 Translation initiation factor IF-3, C-terminal domain Rmag_0647 PF05198 Translation initiation factor IF-3, N-terminal domain Rmag_0648 PF02824 TGS domain Rmag_0648 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Rmag_0648 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Rmag_0648 PF03129 Anticodon binding domain Rmag_0649 PF17768 RecJ OB domain Rmag_0649 PF02272 DHHA1 domain Rmag_0649 PF01368 DHH family Rmag_0651 PF01266 FAD dependent oxidoreductase Rmag_0652 PF01252 Signal peptidase (SPase) II Rmag_0656 PF13145 PPIC-type PPIASE domain Rmag_0659 PF03100 CcmE Rmag_0661 PF01578 Cytochrome C assembly protein Rmag_0662 PF00814 Glycoprotease family Rmag_0663 PF00912 Transglycosylase Rmag_0663 PF14814 Bifunctional transglycosylase second domain Rmag_0663 PF00905 Penicillin binding protein transpeptidase domain Rmag_0664 PF01250 Ribosomal protein S6 Rmag_0665 PF01084 Ribosomal protein S18 Rmag_0666 PF03948 Ribosomal protein L9, C-terminal domain Rmag_0666 PF01281 Ribosomal protein L9, N-terminal domain Rmag_0667 PF03796 DnaB-like helicase C terminal domain Rmag_0667 PF00772 DnaB-like helicase N terminal domain Rmag_0668 PF01168 Alanine racemase, N-terminal domain Rmag_0668 PF00842 Alanine racemase, C-terminal domain Rmag_0669 PF00149 Calcineurin-like phosphoesterase Rmag_0671 PF03129 Anticodon binding domain Rmag_0671 PF13393 Histidyl-tRNA synthetase Rmag_0673 PF01926 50S ribosome-binding GTPase Rmag_0673 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Rmag_0674 PF06418 CTP synthase N-terminus Rmag_0674 PF00117 Glutamine amidotransferase class-I Rmag_0676 PF00005 ABC transporter Rmag_0676 PF00664 ABC transporter transmembrane region Rmag_0677 PF00591 Glycosyl transferase family, a/b domain Rmag_0677 PF02885 Glycosyl transferase family, helical bundle domain Rmag_0683 PF03167 Uracil DNA glycosylase superfamily Rmag_0684 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Rmag_0684 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Rmag_0685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Rmag_0685 PF01568 Molydopterin dinucleotide binding domain Rmag_0685 PF00384 Molybdopterin oxidoreductase Rmag_0686 PF03793 PASTA domain Rmag_0686 PF00069 Protein kinase domain Rmag_0687 PF07690 Major Facilitator Superfamily Rmag_0688 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Rmag_0688 PF04324 BFD-like [2Fe-2S] binding domain Rmag_0688 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Rmag_0688 PF18267 Rubredoxin NAD+ reductase C-terminal domain Rmag_0688 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_0689 PF02391 MoaE protein Rmag_0690 PF12804 MobA-like NTP transferase domain Rmag_0691 PF03453 MoeA N-terminal region (domain I and II) Rmag_0691 PF03454 MoeA C-terminal region (domain IV) Rmag_0691 PF00994 Probable molybdopterin binding domain Rmag_0692 PF01967 MoaC family Rmag_0693 PF04055 Radical SAM superfamily Rmag_0693 PF06463 Molybdenum Cofactor Synthesis C Rmag_0698 PF00994 Probable molybdopterin binding domain Rmag_0699 PF00092 von Willebrand factor type A domain Rmag_0700 PF08406 CbbQ/NirQ/NorQ C-terminal Rmag_0700 PF07728 AAA domain (dynein-related subfamily) Rmag_0701 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Rmag_0701 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Rmag_0704 PF01960 ArgJ family Rmag_0707 PF08402 TOBE domain Rmag_0707 PF00005 ABC transporter Rmag_0708 PF00394 Multicopper oxidase Rmag_0708 PF07732 Multicopper oxidase Rmag_0708 PF07731 Multicopper oxidase Rmag_0714 PF16916 Dimerisation domain of Zinc Transporter Rmag_0714 PF01545 Cation efflux family Rmag_0716 PF00085 Thioredoxin Rmag_0717 PF03960 ArsC family Rmag_0721 PF02092 Glycyl-tRNA synthetase beta subunit Rmag_0724 PF02472 Biopolymer transport protein ExbD/TolR Rmag_0725 PF01618 MotA/TolQ/ExbB proton channel family Rmag_0730 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Rmag_0730 PF01488 Shikimate / quinate 5-dehydrogenase Rmag_0730 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Rmag_0731 PF03462 PCRF domain Rmag_0731 PF00472 RF-1 domain Rmag_0732 PF00950 ABC 3 transport family Rmag_0733 PF01475 Ferric uptake regulator family Rmag_0734 PF04355 SmpA / OmlA family Rmag_0735 PF06965 Na+/H+ antiporter 1 Rmag_0735 PF01343 Peptidase family S49 Rmag_0736 PF00005 ABC transporter Rmag_0737 PF03379 CcmB protein Rmag_0738 PF00438 S-adenosylmethionine synthetase, N-terminal domain Rmag_0738 PF02772 S-adenosylmethionine synthetase, central domain Rmag_0738 PF02773 S-adenosylmethionine synthetase, C-terminal domain Rmag_0739 PF05221 S-adenosyl-L-homocysteine hydrolase Rmag_0739 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Rmag_0740 PF02091 Glycyl-tRNA synthetase alpha subunit Rmag_0741 PF09335 SNARE associated Golgi protein Rmag_0742 PF00924 Mechanosensitive ion channel Rmag_0743 PF01938 TRAM domain Rmag_0743 PF00919 Uncharacterized protein family UPF0004 Rmag_0743 PF04055 Radical SAM superfamily Rmag_0748 PF04356 Protein of unknown function (DUF489) Rmag_0749 PF01649 Ribosomal protein S20 Rmag_0750 PF13742 OB-fold nucleic acid binding domain Rmag_0750 PF02601 Exonuclease VII, large subunit Rmag_0751 PF08525 Opacity-associated protein A N-terminal motif Rmag_0751 PF01551 Peptidase family M23 Rmag_0751 PF01476 LysM domain Rmag_0755 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Rmag_0756 PF02542 YgbB family Rmag_0757 PF08245 Mur ligase middle domain Rmag_0757 PF02875 Mur ligase family, glutamate ligase domain Rmag_0757 PF01225 Mur ligase family, catalytic domain Rmag_0758 PF01565 FAD binding domain Rmag_0758 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Rmag_0759 PF01820 D-ala D-ala ligase N-terminus Rmag_0759 PF07478 D-ala D-ala ligase C-terminus Rmag_0762 PF01464 Transglycosylase SLT domain Rmag_0762 PF01476 LysM domain Rmag_0763 PF01722 BolA-like protein Rmag_0764 PF00970 Oxidoreductase FAD-binding domain Rmag_0764 PF00111 2Fe-2S iron-sulfur cluster binding domain Rmag_0764 PF00175 Oxidoreductase NAD-binding domain Rmag_0766 PF02875 Mur ligase family, glutamate ligase domain Rmag_0766 PF08245 Mur ligase middle domain Rmag_0767 PF01027 Inhibitor of apoptosis-promoting Bax1 Rmag_0768 PF00293 NUDIX domain Rmag_0769 PF00742 Homoserine dehydrogenase Rmag_0769 PF03447 Homoserine dehydrogenase, NAD binding domain Rmag_0769 PF01842 ACT domain Rmag_0770 PF00291 Pyridoxal-phosphate dependent enzyme Rmag_0772 PF00291 Pyridoxal-phosphate dependent enzyme Rmag_0777 PF05193 Peptidase M16 inactive domain Rmag_0777 PF00675 Insulinase (Peptidase family M16) Rmag_0778 PF05193 Peptidase M16 inactive domain Rmag_0778 PF00675 Insulinase (Peptidase family M16) Rmag_0781 PF02881 SRP54-type protein, helical bundle domain Rmag_0781 PF00448 SRP54-type protein, GTPase domain Rmag_0783 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Rmag_0783 PF03900 Porphobilinogen deaminase, C-terminal domain Rmag_0784 PF00206 Lyase Rmag_0784 PF14698 Argininosuccinate lyase C-terminal Rmag_0785 PF02911 Formyl transferase, C-terminal domain Rmag_0785 PF00551 Formyl transferase Rmag_0786 PF00588 SpoU rRNA Methylase family Rmag_0787 PF07724 AAA domain (Cdc48 subfamily) Rmag_0787 PF17871 AAA lid domain Rmag_0787 PF02861 Clp amino terminal domain, pathogenicity island component Rmag_0787 PF10431 C-terminal, D2-small domain, of ClpB protein Rmag_0787 PF00004 ATPase family associated with various cellular activities (AAA) Rmag_0788 PF02508 Rnf-Nqr subunit, membrane protein Rmag_0790 PF05175 Methyltransferase small domain Rmag_0790 PF17827 PrmC N-terminal domain Rmag_0793 PF05683 Fumarase C-terminus Rmag_0793 PF05681 Fumarate hydratase (Fumerase) Rmag_0795 PF04085 rod shape-determining protein MreC Rmag_0797 PF03717 Penicillin-binding Protein dimerisation domain Rmag_0797 PF00905 Penicillin binding protein transpeptidase domain Rmag_0799 PF00005 ABC transporter Rmag_0799 PF00664 ABC transporter transmembrane region Rmag_0800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Rmag_0800 PF01872 RibD C-terminal domain Rmag_0801 PF04127 DNA / pantothenate metabolism flavoprotein Rmag_0801 PF02441 Flavoprotein Rmag_0803 PF01336 OB-fold nucleic acid binding domain Rmag_0803 PF07733 Bacterial DNA polymerase III alpha NTPase domain Rmag_0803 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Rmag_0803 PF14579 Helix-hairpin-helix motif Rmag_0803 PF02811 PHP domain Rmag_0809 PF00425 chorismate binding enzyme Rmag_0809 PF04715 Anthranilate synthase component I, N terminal region Rmag_0810 PF04997 RNA polymerase Rpb1, domain 1 Rmag_0810 PF04983 RNA polymerase Rpb1, domain 3 Rmag_0810 PF05000 RNA polymerase Rpb1, domain 4 Rmag_0810 PF04998 RNA polymerase Rpb1, domain 5 Rmag_0810 PF00623 RNA polymerase Rpb1, domain 2 Rmag_0811 PF04565 RNA polymerase Rpb2, domain 3 Rmag_0811 PF04560 RNA polymerase Rpb2, domain 7 Rmag_0811 PF00562 RNA polymerase Rpb2, domain 6 Rmag_0811 PF04561 RNA polymerase Rpb2, domain 2 Rmag_0811 PF10385 RNA polymerase beta subunit external 1 domain Rmag_0811 PF04563 RNA polymerase beta subunit Rmag_0812 PF16320 Ribosomal protein L7/L12 dimerisation domain Rmag_0812 PF00542 Ribosomal protein L7/L12 C-terminal domain Rmag_0813 PF00466 Ribosomal protein L10 Rmag_0814 PF00687 Ribosomal protein L1p/L10e family Rmag_0815 PF03946 Ribosomal protein L11, N-terminal domain Rmag_0815 PF00298 Ribosomal protein L11, RNA binding domain Rmag_0816 PF02357 Transcription termination factor nusG Rmag_0816 PF00467 KOW motif Rmag_0817 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Rmag_0818 PF03143 Elongation factor Tu C-terminal domain Rmag_0818 PF03144 Elongation factor Tu domain 2 Rmag_0818 PF00009 Elongation factor Tu GTP binding domain Rmag_0819 PF03949 Malic enzyme, NAD binding domain Rmag_0819 PF00390 Malic enzyme, N-terminal domain Rmag_0821 PF02347 Glycine cleavage system P-protein Rmag_0822 PF01230 HIT domain Rmag_0825 PF00881 Nitroreductase family Rmag_0826 PF00753 Metallo-beta-lactamase superfamily Rmag_0826 PF16123 Hydroxyacylglutathione hydrolase C-terminus Rmag_0828 PF01113 Dihydrodipicolinate reductase, N-terminus Rmag_0828 PF05173 Dihydrodipicolinate reductase, C-terminus Rmag_0831 PF00793 DAHP synthetase I family Rmag_0832 PF00218 Indole-3-glycerol phosphate synthase Rmag_0833 PF02566 OsmC-like protein Rmag_0834 PF05690 Thiazole biosynthesis protein ThiG Rmag_0835 PF00155 Aminotransferase class I and II Rmag_0836 PF12697 Alpha/beta hydrolase family Rmag_0837 PF00731 AIR carboxylase Rmag_0838 PF02222 ATP-grasp domain Rmag_0838 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Rmag_0840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Rmag_0840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Rmag_0841 PF02348 Cytidylyltransferase Rmag_0842 PF03966 Trm112p-like protein Rmag_0843 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Rmag_0844 PF12704 MacB-like periplasmic core domain Rmag_0844 PF02687 FtsX-like permease family Rmag_0845 PF00005 ABC transporter Rmag_0846 PF02261 Aspartate decarboxylase Rmag_0847 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Rmag_0848 PF02436 Conserved carboxylase domain Rmag_0848 PF00682 HMGL-like Rmag_0848 PF00364 Biotin-requiring enzyme Rmag_0850 PF01176 Translation initiation factor 1A / IF-1 Rmag_0851 PF02219 Methylenetetrahydrofolate reductase Rmag_0855 PF01699 Sodium/calcium exchanger protein Rmag_0856 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rmag_0858 PF07685 CobB/CobQ-like glutamine amidotransferase domain Rmag_0858 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Rmag_0860 PF13247 4Fe-4S dicluster domain Rmag_0862 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Rmag_0862 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_0865 PF04358 DsrC like protein Rmag_0866 PF04077 DsrH like protein Rmag_0867 PF02635 DsrE/DsrF-like family Rmag_0868 PF02635 DsrE/DsrF-like family Rmag_0869 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Rmag_0869 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Rmag_0870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Rmag_0870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Rmag_0871 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Rmag_0871 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_0872 PF01245 Ribosomal protein L19 Rmag_0874 PF01272 Transcription elongation factor, GreA/GreB, C-term Rmag_0874 PF03449 Transcription elongation factor, N-terminal Rmag_0875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Rmag_0875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Rmag_0875 PF02142 MGS-like domain Rmag_0876 PF04333 MlaA lipoprotein Rmag_0877 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Rmag_0877 PF00117 Glutamine amidotransferase class-I Rmag_0882 PF02272 DHHA1 domain Rmag_0882 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Rmag_0882 PF01411 tRNA synthetases class II (A) Rmag_0883 PF01380 SIS domain Rmag_0884 PF00342 Phosphoglucose isomerase Rmag_0885 PF00483 Nucleotidyl transferase Rmag_0886 PF02719 Polysaccharide biosynthesis protein Rmag_0887 PF02397 Bacterial sugar transferase Rmag_0889 PF00535 Glycosyl transferase family 2 Rmag_0890 PF13439 Glycosyltransferase Family 4 Rmag_0890 PF00534 Glycosyl transferases group 1 Rmag_0891 PF00535 Glycosyl transferase family 2 Rmag_0892 PF04991 LicD family Rmag_0893 PF01467 Cytidylyltransferase-like Rmag_0902 PF01370 NAD dependent epimerase/dehydratase family Rmag_0903 PF16363 GDP-mannose 4,6 dehydratase Rmag_0904 PF00483 Nucleotidyl transferase Rmag_0904 PF01050 Mannose-6-phosphate isomerase Rmag_0909 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Rmag_0909 PF00749 tRNA synthetases class I (E and Q), catalytic domain Rmag_0910 PF01975 Survival protein SurE Rmag_0911 PF17871 AAA lid domain Rmag_0911 PF07724 AAA domain (Cdc48 subfamily) Rmag_0911 PF00004 ATPase family associated with various cellular activities (AAA) Rmag_0911 PF10431 C-terminal, D2-small domain, of ClpB protein Rmag_0911 PF02861 Clp amino terminal domain, pathogenicity island component Rmag_0912 PF02617 ATP-dependent Clp protease adaptor protein ClpS Rmag_0913 PF03739 Lipopolysaccharide export system permease LptF/LptG Rmag_0914 PF00958 GMP synthase C terminal domain Rmag_0914 PF02540 NAD synthase Rmag_0914 PF00117 Glutamine amidotransferase class-I Rmag_0915 PF14437 MafB19-like deaminase Rmag_0917 PF00698 Acyl transferase domain Rmag_0918 PF01016 Ribosomal L27 protein Rmag_0919 PF00829 Ribosomal prokaryotic L21 protein Rmag_0920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rmag_0921 PF00149 Calcineurin-like phosphoesterase Rmag_0922 PF00773 RNB domain Rmag_0923 PF01597 Glycine cleavage H-protein Rmag_0924 PF01571 Aminomethyltransferase folate-binding domain Rmag_0924 PF08669 Glycine cleavage T-protein C-terminal barrel domain Rmag_0925 PF04279 Intracellular septation protein A Rmag_0927 PF01042 Endoribonuclease L-PSP Rmag_0928 PF17191 RecG wedge domain Rmag_0928 PF00271 Helicase conserved C-terminal domain Rmag_0928 PF00270 DEAD/DEAH box helicase Rmag_0929 PF04345 Chorismate lyase Rmag_0930 PF13847 Methyltransferase domain Rmag_0931 PF00117 Glutamine amidotransferase class-I Rmag_0932 PF00581 Rhodanese-like domain Rmag_0934 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Rmag_0934 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Rmag_0935 PF00380 Ribosomal protein S9/S16 Rmag_0936 PF00572 Ribosomal protein L13 Rmag_0937 PF00884 Sulfatase Rmag_0937 PF08019 Phosphoethanolamine transferase EptA/EptB Rmag_0939 PF00578 AhpC/TSA family Rmag_0942 PF12343 Cold shock protein DEAD box A Rmag_0942 PF00271 Helicase conserved C-terminal domain Rmag_0942 PF00270 DEAD/DEAH box helicase Rmag_0942 PF03880 DbpA RNA binding domain Rmag_0944 PF00313 'Cold-shock' DNA-binding domain Rmag_0946 PF00929 Exonuclease Rmag_0946 PF08411 Exonuclease C-terminal Rmag_0947 PF00633 Helix-hairpin-helix motif Rmag_0947 PF10576 Iron-sulfur binding domain of endonuclease III Rmag_0947 PF00730 HhH-GPD superfamily base excision DNA repair protein Rmag_0949 PF00117 Glutamine amidotransferase class-I Rmag_0950 PF00475 Imidazoleglycerol-phosphate dehydratase Rmag_0951 PF02774 Semialdehyde dehydrogenase, dimerisation domain Rmag_0951 PF01118 Semialdehyde dehydrogenase, NAD binding domain Rmag_0952 PF01784 NIF3 (NGG1p interacting factor 3) Rmag_0953 PF00155 Aminotransferase class I and II Rmag_0954 PF08543 Phosphomethylpyrimidine kinase Rmag_0955 PF01323 DSBA-like thioredoxin domain Rmag_0956 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Rmag_0957 PF02152 Dihydroneopterin aldolase Rmag_0958 PF02660 Glycerol-3-phosphate acyltransferase Rmag_0960 PF01061 ABC-2 type transporter Rmag_0961 PF00005 ABC transporter Rmag_0962 PF00364 Biotin-requiring enzyme Rmag_0962 PF02817 e3 binding domain Rmag_0962 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Rmag_0963 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Rmag_0963 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_0966 PF00890 FAD binding domain Rmag_0966 PF02910 Fumarate reductase flavoprotein C-term Rmag_0967 PF01327 Polypeptide deformylase Rmag_0968 PF02954 Bacterial regulatory protein, Fis family Rmag_0969 PF01808 AICARFT/IMPCHase bienzyme Rmag_0969 PF02142 MGS-like domain Rmag_0971 PF01812 5-formyltetrahydrofolate cyclo-ligase family Rmag_0972 PF01494 FAD binding domain Rmag_0973 PF01523 Putative modulator of DNA gyrase Rmag_0975 PF00571 CBS domain Rmag_0975 PF03471 Transporter associated domain Rmag_0976 PF03658 RnfH family Ubiquitin Rmag_0977 PF00977 Histidine biosynthesis protein Rmag_0978 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Rmag_0980 PF00814 Glycoprotease family Rmag_0981 PF00005 ABC transporter Rmag_0981 PF12399 Branched-chain amino acid ATP-binding cassette transporter Rmag_0982 PF03099 Biotin/lipoate A/B protein ligase family Rmag_0982 PF02237 Biotin protein ligase C terminal domain Rmag_0982 PF08279 HTH domain Rmag_0983 PF01219 Prokaryotic diacylglycerol kinase Rmag_0984 PF01416 tRNA pseudouridine synthase Rmag_0985 PF08267 Cobalamin-independent synthase, N-terminal domain Rmag_0985 PF01717 Cobalamin-independent synthase, Catalytic domain Rmag_0986 PF03466 LysR substrate binding domain Rmag_0986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Rmag_0987 PF03600 Citrate transporter Rmag_0987 PF02080 TrkA-C domain Rmag_0988 PF00484 Carbonic anhydrase Rmag_0989 PF01782 RimM N-terminal domain Rmag_0989 PF05239 PRC-barrel domain Rmag_0990 PF00886 Ribosomal protein S16 Rmag_0991 PF00206 Lyase Rmag_0991 PF08328 Adenylosuccinate lyase C-terminal Rmag_0992 PF11791 Aconitate B N-terminal domain Rmag_0992 PF00330 Aconitase family (aconitate hydratase) Rmag_0992 PF06434 Aconitate hydratase 2 N-terminus Rmag_0993 PF00471 Ribosomal protein L33 Rmag_0994 PF00830 Ribosomal L28 family Rmag_0995 PF00156 Phosphoribosyl transferase domain Rmag_0996 PF03372 Endonuclease/Exonuclease/phosphatase family Rmag_0997 PF02390 Putative methyltransferase Rmag_0998 PF04186 FxsA cytoplasmic membrane protein Rmag_0999 PF02875 Mur ligase family, glutamate ligase domain Rmag_0999 PF08245 Mur ligase middle domain Rmag_1001 PF00156 Phosphoribosyl transferase domain Rmag_1002 PF01053 Cys/Met metabolism PLP-dependent enzyme Rmag_1003 PF07977 FabA-like domain Rmag_1004 PF00109 Beta-ketoacyl synthase, N-terminal domain Rmag_1004 PF02801 Beta-ketoacyl synthase, C-terminal domain Rmag_1005 PF07549 SecD/SecF GG Motif Rmag_1005 PF02355 Protein export membrane protein Rmag_1006 PF07549 SecD/SecF GG Motif Rmag_1006 PF13721 SecD export protein N-terminal TM region Rmag_1006 PF02355 Protein export membrane protein Rmag_1007 PF02699 Preprotein translocase subunit Rmag_1008 PF02403 Seryl-tRNA synthetase N-terminal domain Rmag_1008 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Rmag_1009 PF00581 Rhodanese-like domain Rmag_1012 PF00196 Bacterial regulatory proteins, luxR family Rmag_1012 PF00072 Response regulator receiver domain Rmag_1013 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Rmag_1013 PF07730 Histidine kinase Rmag_1013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Rmag_1013 PF00672 HAMP domain Rmag_1014 PF12631 MnmE helical domain Rmag_1014 PF10396 GTP-binding protein TrmE N-terminus Rmag_1014 PF01926 50S ribosome-binding GTPase Rmag_1015 PF04262 Glutamate-cysteine ligase Rmag_1016 PF00293 NUDIX domain Rmag_1018 PF01493 GXGXG motif Rmag_1018 PF00310 Glutamine amidotransferases class-II Rmag_1018 PF04898 Glutamate synthase central domain Rmag_1018 PF01645 Conserved region in glutamate synthase Rmag_1019 PF00186 Dihydrofolate reductase Rmag_1021 PF00271 Helicase conserved C-terminal domain Rmag_1021 PF02559 CarD-like/TRCF domain Rmag_1021 PF00270 DEAD/DEAH box helicase Rmag_1021 PF03461 TRCF domain Rmag_1021 PF17757 UvrB interaction domain Rmag_1022 PF00294 pfkB family carbohydrate kinase Rmag_1023 PF02401 LytB protein Rmag_1024 PF01039 Carboxyl transferase domain Rmag_1024 PF17848 Acetyl-coA carboxylase zinc finger domain Rmag_1025 PF00290 Tryptophan synthase alpha chain Rmag_1026 PF01208 Uroporphyrinogen decarboxylase (URO-D) Rmag_1027 PF01197 Ribosomal protein L31 Rmag_1028 PF00403 Heavy-metal-associated domain Rmag_1030 PF12804 MobA-like NTP transferase domain Rmag_1030 PF00132 Bacterial transferase hexapeptide (six repeats) Rmag_1031 PF00291 Pyridoxal-phosphate dependent enzyme Rmag_1032 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Rmag_1034 PF13368 Topoisomerase C-terminal repeat Rmag_1034 PF01751 Toprim domain Rmag_1034 PF01131 DNA topoisomerase Rmag_1035 PF04361 Protein of unknown function (DUF494) Rmag_1037 PF00468 Ribosomal protein L34 Rmag_1038 PF00825 Ribonuclease P Rmag_1039 PF01809 Putative membrane protein insertion efficiency factor Rmag_1040 PF14849 YidC periplasmic domain Rmag_1040 PF02096 60Kd inner membrane protein Rmag_1042 PF01510 N-acetylmuramoyl-L-alanine amidase Rmag_1044 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Rmag_1044 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Rmag_1045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Rmag_1045 PF02874 ATP synthase alpha/beta family, beta-barrel domain Rmag_1046 PF00231 ATP synthase Rmag_1047 PF02874 ATP synthase alpha/beta family, beta-barrel domain Rmag_1047 PF00306 ATP synthase alpha/beta chain, C terminal domain Rmag_1047 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Rmag_1048 PF00213 ATP synthase delta (OSCP) subunit Rmag_1049 PF00430 ATP synthase B/B' CF(0) Rmag_1050 PF00137 ATP synthase subunit C Rmag_1051 PF00119 ATP synthase A chain Rmag_1053 PF07992 Pyridine nucleotide-disulphide oxidoreductase Rmag_1054 PF01513 ATP-NAD kinase Rmag_1055 PF01025 GrpE Rmag_1057 PF11412 Disulphide bond corrector protein DsbC Rmag_1057 PF02683 Cytochrome C biogenesis protein transmembrane region Rmag_1058 PF01220 Dehydroquinase class II Rmag_1059 PF00364 Biotin-requiring enzyme Rmag_1060 PF02785 Biotin carboxylase C-terminal domain Rmag_1060 PF00289 Biotin carboxylase, N-terminal domain Rmag_1060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Rmag_1061 PF02774 Semialdehyde dehydrogenase, dimerisation domain Rmag_1061 PF01118 Semialdehyde dehydrogenase, NAD binding domain Rmag_1062 PF01521 Iron-sulphur cluster biosynthesis Rmag_1063 PF00285 Citrate synthase, C-terminal domain Rmag_1066 PF03109 ABC1 family Rmag_1067 PF01386 Ribosomal L25p family Rmag_1067 PF14693 Ribosomal protein TL5, C-terminal domain Rmag_1068 PF01195 Peptidyl-tRNA hydrolase Rmag_1069 PF01926 50S ribosome-binding GTPase Rmag_1069 PF06071 Protein of unknown function (DUF933) Rmag_1070 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Rmag_1070 PF01676 Metalloenzyme superfamily Rmag_1071 PF00834 Ribulose-phosphate 3 epimerase family Rmag_1072 PF00318 Ribosomal protein S2 Rmag_1073 PF00889 Elongation factor TS Rmag_1075 PF03840 Preprotein translocase SecG subunit Rmag_1076 PF00121 Triosephosphate isomerase