locus strain_id interpro function go others Rmag_0001 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417|IPR038454 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|DnaA, N-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.30.300.180|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 Rmag_0002 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta sliding clamp|DNA polymerase III, beta sliding clamp, C-terminal|DNA polymerase III, beta sliding clamp, N-terminal|DNA polymerase III, beta sliding clamp, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|G3DSA:3.70.10.10|PF00712|PF02767|PF02768|PIRSF000804|SM00480|SSF55979|TIGR00663 Rmag_0003 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568|IPR036890 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, C-terminal|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 Rmag_0004 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006082|IPR006083|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase|Phosphoribulokinase/uridine kinase GO:0005524|GO:0005975|GO:0008974|GO:0016301 G3DSA:3.40.50.300|PF00485|PR00478|PS00567|SSF52540 Rmag_0005 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR025709 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:2.30.210.10|G3DSA:3.10.20.590|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF13603|PR00985|PS00178|SSF47323|SSF50677|SSF52374|TIGR00396 Rmag_0006 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001295|IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PS00912|SSF51395|TIGR01037 Rmag_0007 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|SSF52540|TIGR00347 Rmag_0008 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004045|IPR004046|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Thioredoxin-like superfamily GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13409|SSF47616|SSF52833 Rmag_0009 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002326|IPR036909 Cytochrome c-like domain superfamily|Cytochrome c1 GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02167|SSF46626 Rmag_0010 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005797|IPR005798|IPR016174|IPR027387|IPR030689|IPR036150 Cytochrome b|Cytochrome b/b6, C-terminal|Cytochrome b/b6, C-terminal domain superfamily|Cytochrome b/b6, N-terminal|Cytochrome b/b6-like domain superfamily|Di-haem cytochrome, transmembrane GO:0006122|GO:0008121|GO:0009055|GO:0016020|GO:0016491|GO:0022904|GO:0045275 G3DSA:1.20.810.10|PF00032|PF00033|PIRSF038885|SSF81342|SSF81648 Rmag_0011 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005805|IPR006317|IPR017941|IPR019470|IPR036922 Rieske [2Fe-2S] iron-sulphur domain|Rieske [2Fe-2S] iron-sulphur domain superfamily|Rieske iron-sulphur protein, C-terminal|Ubiquinol-cytochrome c reductase, iron-sulphur subunit|Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0016020|GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PF10399|PR00162|SSF50022|TIGR01416 Rmag_0013 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417|IPR036266|IPR036670 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA, Wing/Scaffold superfamily|SecA, preprotein cross-linking domain|SecA, preprotein cross-linking domain superfamily GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 Rmag_0014 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|SSF53067 Rmag_0015 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002195|IPR004721|IPR006680|IPR032466 Amidohydrolase-related|Dihydroorotase homodimeric type|Dihydroorotase, conserved site|Metal-dependent hydrolase GO:0004151|GO:0016787|GO:0016812|GO:0019856 G3DSA:3.20.20.140|MF_00219|PF01979|PIRSF001237|PS00482|PS00483|SSF51556|TIGR00856 Rmag_0016 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465 FAD synthetase|Riboflavin kinase domain superfamily|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|SM00904|SSF52374|SSF82114|TIGR00083 Rmag_0018 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR029062|IPR033752 Class I glutamine amidotransferase-like|MetA family G3DSA:3.40.50.880|MF_00295|PD037892|PF04204|PIRSF000450|SSF52317 Rmag_0019 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase SSF52540 Rmag_0020 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 Rmag_0021 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain G3DSA:3.10.50.40|PF00254|SSF54534 Rmag_0022 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR021246 Protein of unknown function DUF2797 PF10977 Rmag_0023 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001636|IPR018236|IPR028923 Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01058|SSF56104|TIGR00081 Rmag_0024 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.450.350|PF01551|SSF51261 Rmag_0025 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003821|IPR013512|IPR013644|IPR026877|IPR036169|IPR036291 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|DXP reductoisomerase, C-terminal domain superfamily|NAD(P)-binding domain superfamily GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|SSF51735|SSF55347|SSF69055|TIGR00243 Rmag_0026 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315 Rmag_0027 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001441|IPR018520|IPR036424 Decaprenyl diphosphate synthase-like|Decaprenyl diphosphate synthase-like superfamily|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 Rmag_0028 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737 G3DSA:3.20.20.70|MF_01013|PF00977|SSF51366|TIGR00735 Rmag_0030 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000537|IPR006369|IPR030470 Protohaem IX farnesyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0008495|GO:0016021|GO:0016765|GO:0048034 G3DSA:1.10.357.140|MF_00154|PF01040|PS00943|TIGR01473 Rmag_0031 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR021344 Protein of unknown function DUF2970 PF11174 Rmag_0032 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 PF02628 Rmag_0033 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR018692 Predicted integral membrane protein DUF2189 PF09955 Rmag_0034 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001505|IPR002429|IPR008972|IPR009056|IPR011759|IPR014222|IPR036257|IPR036909 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome C oxidase subunit II, transmembrane domain superfamily|Cytochrome c oxidase subunit II-like C-terminal|Cytochrome c oxidase, subunit II|Cytochrome c-like domain|Cytochrome c-like domain superfamily GO:0004129|GO:0005507|GO:0009055|GO:0016020|GO:0016021|GO:0016491|GO:0020037|GO:0022900 G3DSA:1.10.287.90|G3DSA:1.10.760.10|G3DSA:2.60.40.420|PF00116|PF02790|PF13442|PR01166|PS00078|SSF46626|SSF49503|SSF81464|TIGR02866 Rmag_0035 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000883|IPR014241|IPR023615|IPR036927 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome c oxidase-like, subunit I superfamily GO:0004129|GO:0005886|GO:0009060|GO:0015990|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442|TIGR02891 Rmag_0036 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007533|IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11|Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily GO:0005507 G3DSA:2.60.370.10|PF04442|PIRSF005413|SSF110111 Rmag_0037 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000298|IPR013833|IPR035973 Cytochrome c oxidase subunit III-like|Cytochrome c oxidase subunit III-like superfamily|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.10.287.70|G3DSA:1.20.120.80|PF00510|SSF81452 Rmag_0038 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104 Rmag_0039 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000883|IPR004677|IPR023615|IPR036927 Cytochrome c oxidase cbb3-type, subunit I|Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome c oxidase-like, subunit I superfamily GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0045278|GO:0055114 G3DSA:1.20.210.10|PF00115|PS00077|SSF81442|TIGR00780 Rmag_0040 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003468|IPR036909 Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain superfamily GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02433|SSF46626|TIGR00781 Rmag_0041 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004678|IPR009056|IPR032858|IPR036909|IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal|Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily|Cytochrome c oxidase cbb3-type, subunit III|Cytochrome c-like domain|Cytochrome c-like domain superfamily GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:1.20.58.1490|PF13442|PF14715|PIRSF000006|SSF46626|TIGR00782 Rmag_0042 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004564|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA-like G3DSA:2.50.20.10|PF03548|SSF89392 Rmag_0043 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002543|IPR018541|IPR025199|IPR027417|IPR036388|IPR036390 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0000166|GO:0003677|GO:0005524 G3DSA:1.10.10.10|G3DSA:3.30.980.40|G3DSA:3.40.50.300|PF01580|PF09397|PF13491|SM00843|SSF46785|SSF52540 Rmag_0044 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000103|IPR005982|IPR008255|IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|SSF51905|TIGR01292 Rmag_0045 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002082|IPR006130|IPR006131|IPR006132|IPR036901 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase superfamily|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|SSF53671|TIGR00670 Rmag_0046 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005227|IPR006641|IPR012337|IPR037027 Putative pre-16S rRNA nuclease|Ribonuclease H-like superfamily|YqgF/RNase H-like domain|YqgF/RNase H-like domain superfamily GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250 Rmag_0047 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002477|IPR011970|IPR023346|IPR031304|IPR036365|IPR036366 Lysozyme-like domain superfamily|Lytic murein transglycosylase|PGBD superfamily|PGBD-like superfamily|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|G3DSA:1.10.8.350|PF01471|PF13406|SSF47090|SSF53955|TIGR02283 Rmag_0048 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003374|IPR005195|IPR024932 ApbE-like superfamily|Flavin transferase ApbE|Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975|GO:0017013 G3DSA:3.10.520.20|PF02424|PF03632|PIRSF006268|SSF143631 Rmag_0050 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|TIGR00494 Rmag_0051 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain superfamily|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|SSF52440|SSF56059|TIGR01380 Rmag_0052 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003728|IPR028989|IPR028998|IPR035956|IPR036847 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, C-terminal domain superfamily|Ribosome maturation factor RimP, N-terminal|RimP, N-terminal domain superfamily GO:0042274 G3DSA:3.30.300.70|MF_01077|PF02576|PF17384|SSF74942|SSF75420 Rmag_0053 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842|IPR036555 DNA repair Rad51/transcription factor NusA, alpha-helical|K Homology domain|K homology domain superfamily, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|NusA, N-terminal domain superfamily|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF14520|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953 Rmag_0054 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000178|IPR000795|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417|IPR036925 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor IF-2, domain 3 superfamily|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain superfamily GO:0003743|GO:0003924|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|PS01176|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 Rmag_0055 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000238|IPR015946|IPR020053|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain superfamily|Ribosome-binding factor A, conserved site GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|SSF89919|TIGR00082 Rmag_0056 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002501|IPR014780|IPR015240|IPR015947|IPR020103|IPR032819|IPR036974 PUA domain superfamily|PUA-like superfamily|Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain superfamily|tRNA pseudouridine synthase II, TruB|tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 G3DSA:2.30.130.10|G3DSA:3.30.2350.10|MF_01080|PF01509|PF09157|PF16198|SSF55120|SSF88697|TIGR00431 Rmag_0057 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000115|IPR011054|IPR013815|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562|IPR037123 ATP-grasp fold, subdomain 1|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, C-domain superfamily|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 Rmag_0058 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007055 BON domain PF04972 Rmag_0059 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063|IPR035996 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase superfamily|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|SSF53790|TIGR00096 Rmag_0061 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|SSF52540|TIGR00152 Rmag_0062 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00232 Rmag_0063 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006424|IPR020828|IPR020829|IPR020830|IPR020831|IPR036291 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain superfamily GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347|TIGR01534 Rmag_0065 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001576|IPR015824|IPR036043 Phosphoglycerate kinase|Phosphoglycerate kinase superfamily|Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 G3DSA:3.40.50.1260|MF_00145|PF00162|PIRSF000724|PR00477|SSF53748 Rmag_0066 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001697|IPR011037|IPR015793|IPR015795|IPR015806|IPR015813|IPR018209|IPR036918 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, C-terminal domain superfamily|Pyruvate kinase, active site|Pyruvate kinase, barrel|Pyruvate kinase, insert domain superfamily|Pyruvate kinase-like, insert domain superfamily|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|SSF50800|SSF51621|SSF52935|TIGR01064 Rmag_0067 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Fructose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|SSF51569|TIGR00167|TIGR01521 Rmag_0068 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002218|IPR004416|IPR020595|IPR026904|IPR036188 FAD/NAD(P)-binding domain superfamily|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0050660 G3DSA:1.10.10.1800|G3DSA:1.10.150.570|G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|SM01228|SSF51905|TIGR00136 Rmag_0069 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|SSF53335|TIGR00138 Rmag_0071 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised hydrolase TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01091|PS01137|SSF51556|TIGR00010 Rmag_0072 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103|IPR036986 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01129|SSF55120|SSF55174|TIGR00005 Rmag_0073 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000537|IPR006370 4-hydroxybenzoate polyprenyltransferase-like|UbiA prenyltransferase family GO:0004659|GO:0016021|GO:0016765 G3DSA:1.10.357.140|G3DSA:1.20.120.1780|MF_01635|PF01040|TIGR01474 Rmag_0074 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001451|IPR005664|IPR011004|IPR023180|IPR037133 Hexapeptide repeat|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like superfamily GO:0008666|GO:0009089 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|SSF51161|TIGR00965 Rmag_0075 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013783|IPR014116|IPR017896|IPR017900|IPR032879 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cytochrome c oxidase cbb3 type, accessory protein FixG|FixG, C-terminal immunoglobulin-like domain|Immunoglobulin-like fold GO:0016021|GO:0055114 G3DSA:2.60.40.10|PF11614|PF12801|PF13746|PS00198|SSF54862|TIGR02745 Rmag_0076 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008620 Nitrogen fixation protein FixH PF05751 Rmag_0077 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 Rmag_0078 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060|IPR036279|IPR036397 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain superfamily|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA polymerase I-like, H3TH domain|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN-like domain superfamily|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 Rmag_0079 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729|IPR035684|IPR036695 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|Arginyl tRNA synthetase N-terminal domain superfamily|Arginyl-tRNA synthetase, catalytic core domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 Rmag_0080 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011335|IPR011604|IPR014017|IPR027417|IPR034739 Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:3.40.50.300|G3DSA:3.90.320.10|PF00580|PF13361|SSF52540|SSF52980 Rmag_0082 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013785|IPR022998|IPR034291|IPR036206 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase|Thiamine phosphate synthase/TenI GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|SSF51391|TIGR00693 Rmag_0083 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 G3DSA:2.60.450.10|PF06835|TIGR04409 Rmag_0084 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005653|IPR014340 Lipopolysaccharide export system protein LptA|Organic solvent tolerance-like, N-terminal GO:0001530|GO:0015920|GO:0042597 G3DSA:2.60.450.10|PF03968|TIGR03002 Rmag_0085 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002650|IPR014729|IPR015947|IPR020792|IPR024951|IPR025980 ATP-sulfurylase PUA-like domain|PUA-like superfamily|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase|Sulphate adenylyltransferase catalytic domain|Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 G3DSA:3.10.400.10|G3DSA:3.40.50.620|MF_00066|PF01747|PF14306|SSF52374|SSF88697|TIGR00339 Rmag_0087 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011802|IPR017896|IPR017900|IPR022738|IPR038465 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|APS reductase, beta subunit, C-terminal domain superfamily|Adenylylsulphate reductase, beta subunit|Adenylylsulphate reductase, beta subunit, C-terminal G3DSA:3.30.70.20|G3DSA:3.30.720.40|PF12139|PF12838|PS00198|SSF54862|TIGR02060 Rmag_0088 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003953|IPR011803|IPR015939|IPR027477|IPR036188|IPR037099 Adenylylsulphate reductase, alpha subunit|FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain superfamily|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily GO:0016491|GO:0055114 G3DSA:3.50.50.90|G3DSA:3.90.700.10|PF00890|PF02910|PIRSF000171|SSF46977|SSF51905|SSF56425|TIGR02061 Rmag_0090 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic G3DSA:2.40.10.330|G3DSA:3.10.50.40|SSF54534 Rmag_0092 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 MF_01129|PF03030|PIRSF001265|TIGR01104 Rmag_0093 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000850|IPR006259|IPR007862|IPR027417|IPR033690 Adenylate kinase subfamily|Adenylate kinase, active site lid domain|Adenylate kinase, conserved site|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|SSF52540|TIGR01351 Rmag_0094 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000023|IPR011404|IPR022953|IPR035966 ATP-dependent 6-phosphofructokinase|Phosphofructokinase domain|Phosphofructokinase superfamily|Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0003872|GO:0006002|GO:0006096|GO:0047334 G3DSA:3.40.50.450|G3DSA:3.40.50.460|MF_01978|PF00365|PIRSF036483|PR00476|SSF53784 Rmag_0095 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013783|IPR015919 Cadherin-like superfamily|Immunoglobulin-like fold GO:0005509|GO:0016020 G3DSA:2.60.40.10|SSF49313 Rmag_0097 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|SM00840|SSF47323|SSF52374|TIGR00435 Rmag_0098 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000866|IPR019479|IPR024706|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|SSF52833 Rmag_0099 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 Rmag_0101 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|SSF55811 Rmag_0103 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|SSF50621|SSF51419|TIGR01048 Rmag_0104 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001890|IPR017924|IPR035920 RNA-binding protein YhbY|RNA-binding, CRM domain|YhbY-like superfamily GO:0003723 G3DSA:3.30.110.60|PD010559|PF01985|SM01103|SSF75471|TIGR00253 Rmag_0105 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|MF_00392|PF02684|SSF53756|TIGR00215 Rmag_0106 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277|IPR036068|IPR037128 Aldolase-type TIM barrel|Nicotinate phosphoribosyltransferase-like, C-terminal|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal|Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR00078 Rmag_0107 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000760|IPR006240|IPR020550 3'(2'),5'-bisphosphate nucleotidase CysQ|Inositol monophosphatase, conserved site|Inositol monophosphatase-like GO:0000287|GO:0006790|GO:0008441|GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_02095|PF00459|PR00377|PS00630|SSF56655|TIGR01331 Rmag_0108 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630|IPR036388 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-like DNA-binding domain superfamily GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.220.120|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02393|TIGR02937 Rmag_0109 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000842|IPR005946|IPR029057|IPR029099|IPR037515 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate pyrophosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain|Ribose-phosphate pyrophosphokinase, bacterial-type GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|SM01400|SSF53271|TIGR01251 Rmag_0110 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004424|IPR006204|IPR014721|IPR020568|IPR036554 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain superfamily|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PIRSF010376|SSF54211|SSF55060|TIGR00154 Rmag_0111 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR012337|IPR013520|IPR022894|IPR036397 Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0000175|GO:0003676 G3DSA:3.30.420.10|MF_00045|PF00929|SM00479|SSF53098 Rmag_0112 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000312|IPR005940|IPR017459|IPR035902|IPR036320 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase family 3, N-terminal domain superfamily|Glycosyl transferase, family 3|Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GO:0000162|GO:0004048|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|SSF47648|SSF52418|TIGR01245 Rmag_0113 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000994|IPR001131|IPR007865|IPR029149|IPR036005 Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Creatinase/aminopeptidase-like|Peptidase M24|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO:0004177|GO:0030145 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|PS00491|SM01011|SSF53092|SSF55920 Rmag_0116 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000304|IPR008927|IPR028939|IPR029036|IPR036291 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|NAD(P)-binding domain superfamily|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|SSF48179|SSF51735|TIGR00112 Rmag_0117 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006346|IPR006439|IPR023198|IPR023214|IPR036412 2-phosphoglycolate phosphatase-like, prokaryotic|HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase-like, domain 2 GO:0016787|GO:0016791 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01449|TIGR01549 Rmag_0118 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00508 Rmag_0120 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001650|IPR005259|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0016787|GO:0032508 G3DSA:1.10.8.630|G3DSA:3.40.50.300|MF_00983|PF00271|PF04851|SM00487|SM00490|SSF52540|TIGR00595 Rmag_0121 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002036|IPR020549|IPR023091 Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain superfamily, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|SSF55486|TIGR00043 Rmag_0122 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR015262 Lysidine-tRNA(Ile) synthetase, C-terminal|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase , substrate-binding domain|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:1.20.59.20|G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|PF11734|SM00977|SSF52402|SSF56037|SSF82829|TIGR02432|TIGR02433 Rmag_0123 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain superfamily GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|SSF52096|TIGR00513 Rmag_0124 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002727|IPR018445|IPR038078 PhoU-like domain superfamily|Protein of unknown function DUF47|Putative phosphate transport regulator G3DSA:1.20.58.220|PF01865|SSF109755|TIGR00153 Rmag_0125 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384 Rmag_0126 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002634|IPR036065 BolA protein|BolA-like superfamily G3DSA:3.30.300.90|PF01722|PIRSF003113|SSF82657 Rmag_0127 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 Rmag_0128 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic SSF52266 Rmag_0129 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217 Rmag_0132 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024108|IPR036986 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|RNA-binding S4 domain superfamily|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02007|PF00579|PF01479|PR01040|PS00178|SM00363|SSF52374|SSF55174|TIGR00234 Rmag_0133 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, N-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|SSF53720|TIGR00407 Rmag_0134 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005790|IPR008921|IPR010372|IPR027417|IPR032780 DNA polymerase III delta, N-terminal|DNA polymerase III subunit delta, C-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF06144|PF14840|SSF48019|SSF52540|TIGR01128 Rmag_0135 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 G3DSA:3.30.160.150|MF_01186 Rmag_0136 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417|IPR037219 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase M41-like|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:1.20.58.760|G3DSA:2.40.50.920|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|SM00382|SSF140990|SSF52540|TIGR01241 Rmag_0137 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|SSF51717|TIGR01496 Rmag_0138 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR036900 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, C-terminal domain superfamily|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|SSF53738|SSF55957|TIGR01455 Rmag_0139 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003667|IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA|NqrDE/RnfAE GO:0016020|GO:0022900 MF_00459|PF02508|PIRSF006102|TIGR01943 Rmag_0140 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007202|IPR010207|IPR016463|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Electron transport complex, RnfB/RsxB, Proteobacteria|Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0005886|GO:0009055|GO:0022900|GO:0051536 G3DSA:1.10.15.40|G3DSA:3.30.70.20|MF_00463|PF04060|PF14697|PIRSF005784|PS00198|SSF54862|TIGR01944 Rmag_0141 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009051|IPR010208|IPR011538|IPR017896|IPR017900|IPR026902|IPR037225 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Ion-translocating oxidoreductase complex, subunit RnfC/RsxC|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily|RnfC Barrel sandwich hybrid domain GO:0009055|GO:0016020|GO:0051536|GO:0051539 G3DSA:1.10.1060.10|G3DSA:3.40.50.11540|MF_00461|PF01512|PF13237|PF13375|PS00198|SSF142019|SSF142984|SSF46548|TIGR01945 Rmag_0142 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004338|IPR011303 Ion-translocating oxidoreductase NqrB/RnfD|Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016020|GO:0016021|GO:0022900|GO:0055085 MF_00462|PF03116|TIGR01946 Rmag_0143 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007329|IPR010209 FMN-binding|Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900 MF_00479|PF04205|PIRSF006091|SM00900|TIGR01947 Rmag_0145 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003781|IPR005810|IPR005811|IPR016102|IPR017440|IPR033847|IPR036291 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|ATP-citrate lyase/succinyl-CoA ligase, conserved site|CoA-binding|NAD(P)-binding domain superfamily|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|MF_01988|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|SM00881|SSF51735|SSF52210|TIGR01019 Rmag_0146 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, succinyl-CoA synthetase-type|Succinate--CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0006099 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|SSF52210|SSF56059|TIGR01016 Rmag_0147 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2, domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain superfamily GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 Rmag_0148 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004364|IPR004525 Aminoacyl-tRNA synthetase, class II (D/K/N)|Elongation factor P--(R)-beta-lysine ligase GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:3.30.930.10|PF00152|SSF55681|TIGR00462 Rmag_0149 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 Rmag_0151 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|SSF52402|SSF69864|TIGR00032 Rmag_0152 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 G3DSA:1.20.120.1760|PF01066|PIRSF000847|PS00379|TIGR00560 Rmag_0153 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000713|IPR004101|IPR005863|IPR013221|IPR035911|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|MurE/MurF, N-terminal|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01143 Rmag_0155 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000713|IPR004101|IPR005761|IPR013221|IPR018109|IPR035911|IPR036565|IPR036615 Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|MurE/MurF, N-terminal|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0004326|GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0009396|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PS01011|SSF53244|SSF53623|SSF63418|TIGR01085 Rmag_0156 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006179|IPR008334|IPR019546|IPR029052|IPR036907 5'-Nucleotidase, C-terminal|5'-Nucleotidase, C-terminal domain superfamily|5'-Nucleotidase/apyrase|Metallo-dependent phosphatase-like|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF02872|PR01607|SSF55816|SSF56300|TIGR01409 Rmag_0157 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR032809 Putative HupE/UreJ protein PF13795 Rmag_0158 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0097367|GO:1901135 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|SM00116|SSF53697|SSF54631|TIGR00393 Rmag_0159 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023485|IPR036196 Phosphotyrosine protein phosphatase I|Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.2300|PF01451|SM00226|SSF52788 Rmag_0160 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacterial-type|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|SSF50249|TIGR00981 Rmag_0161 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000235|IPR005717|IPR020606|IPR023798|IPR036823 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7 domain superfamily|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|SSF47973|TIGR01029 Rmag_0162 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR014721|IPR020568|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain superfamily GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 Rmag_0163 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain superfamily GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 Rmag_0164 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001848|IPR018268|IPR027486|IPR036838 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10 domain superfamily|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|SM01403|SSF54999|TIGR01049 Rmag_0165 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:2.40.50.620|MF_01325_B|PF00297|PS00474|SSF50447|TIGR03625 Rmag_0166 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain superfamily|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|SSF52166|TIGR03953 Rmag_0167 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain superfamily|Ribosomal protein L23/L15e core domain superfamily|Ribosomal protein L25/L23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|SSF54189 Rmag_0168 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 2|Ribosomal protein L2, domain 3|Translation protein SH3-like domain superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 Rmag_0169 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|SSF54570|TIGR01050 Rmag_0170 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001063|IPR005727|IPR018260|IPR036394 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17 superfamily|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|SSF54843|TIGR01044 Rmag_0171 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280|IPR036419 K Homology domain|K Homology domain, type 2|K homology domain superfamily, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, C-terminal domain superfamily|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|SM00322|SSF54814|SSF54821|TIGR01009 Rmag_0172 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000114|IPR016180|IPR020798|IPR036920 Ribosomal protein L10e/L16|Ribosomal protein L10e/L16 superfamily|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|SSF54686|TIGR01164 Rmag_0173 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001854|IPR036049 Ribosomal protein L29/L35|Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|SSF46561|TIGR00012 Rmag_0174 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000266|IPR012340|IPR019984 30S ribosomal protein S17|Nucleic acid-binding, OB-fold|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|SSF50249|TIGR03635 Rmag_0175 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000218|IPR005745|IPR019972|IPR036853 Ribosomal protein L14 superfamily|Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|SM01374|SSF50193|TIGR01067 Rmag_0176 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003256|IPR005824|IPR008991|IPR014722 KOW|Ribosomal protein L2, domain 2|Ribosomal protein L24|Translation protein SH3-like domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|SM00739|SSF50104|TIGR01079 Rmag_0177 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain superfamily|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|SSF55282 Rmag_0178 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001209|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|SSF57716 Rmag_0179 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000630|IPR035987 Ribosomal protein S8|Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|SSF56047 Rmag_0180 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000702|IPR002358|IPR019906|IPR020040|IPR036789 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, alpha-beta domain superfamily|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|SSF56053|TIGR03654 Rmag_0181 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|SSF53137|TIGR00060 Rmag_0182 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005324|IPR005712|IPR013810|IPR014721|IPR018192|IPR020568 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|SSF54211|SSF54768|TIGR01021 Rmag_0183 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005996|IPR016082|IPR036919 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain|Ribosomal protein L30, ferredoxin-like fold domain superfamily GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|SSF55129|TIGR01308 Rmag_0184 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005749|IPR021131|IPR030878|IPR036227 Ribosomal L18e/L15P superfamily|Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L18e/L15P GO:0003735|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|SSF52080|TIGR01071 Rmag_0185 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY domain superfamily|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|SSF103491|TIGR00967 Rmag_0186 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000473|IPR035977 Ribosomal protein L36|Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|SSF57840|TIGR01022 Rmag_0187 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|SSF46946|TIGR03631 Rmag_0188 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001971|IPR018102|IPR019981|IPR036967 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11 superfamily|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|SSF53137|TIGR03632 Rmag_0189 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR036986 RNA-binding S4 domain|RNA-binding S4 domain superfamily|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|SM00363|SM01390|SSF55174|TIGR01017 Rmag_0190 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011260|IPR011262|IPR011263|IPR011773|IPR036603|IPR036643 DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|DNA-directed RNA polymerase, insert domain superfamily|RNA polymerase, RBP11-like subunit|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 Rmag_0191 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000456|IPR036373 Ribosomal protein L17|Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|SSF64263|TIGR00059 Rmag_0192 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001911|IPR038380 Ribosomal protein S21|Ribosomal protein S21 superfamily GO:0003735|GO:0005840|GO:0006412 G3DSA:1.20.5.1150|MF_00358|PD005521|PF01165|PR00976|TIGR00030 Rmag_0196 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002579|IPR011057 Mss4-like superfamily|Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|SSF51316|TIGR00357 Rmag_0197 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002646|IPR012006|IPR032828 Poly A polymerase, head domain|tRNA nucleotidyltransferase, proteobacteria|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0001680|GO:0003723|GO:0004810|GO:0005524|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF12627|PIRSF000813|SSF81301|SSF81891 Rmag_0199 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011604|IPR019925|IPR027417|IPR038726 DNA repair protein, predicted|Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase|PD-(D/E)XK endonuclease-like domain, AddAB-type G3DSA:3.90.320.10|PF12705|SSF52540|TIGR03623 Rmag_0200 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|SSF52540|TIGR03598 Rmag_0201 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009056|IPR036909 Cytochrome c-like domain|Cytochrome c-like domain superfamily GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 Rmag_0202 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009056|IPR036909 Cytochrome c-like domain|Cytochrome c-like domain superfamily GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 Rmag_0203 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009056|IPR024167|IPR036909 Cytochrome c-like domain|Cytochrome c-like domain superfamily|Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PIRSF000005|SSF46626 Rmag_0204 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304|IPR036611|IPR037041 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor ribosome-binding domain superfamily|Trigger factor, C-terminal|Trigger factor, C-terminal domain superfamily|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain superfamily GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998|SSF54534|TIGR00115 Rmag_0205 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001907|IPR018215|IPR023562|IPR029045 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP/crotonase-like domain superfamily GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|SSF52096|TIGR00493 Rmag_0206 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417|IPR038366 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type|Zinc finger, ClpX C4-type superfamily GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.30.50.30|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 Rmag_0207 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.11060|G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|SSF52540|TIGR03156 Rmag_0208 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|Lon, substrate-binding domain|P-loop containing nucleoside triphosphate hydrolase|PUA-like superfamily|Peptidase S16, Lon proteolytic domain|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.8.60|G3DSA:1.20.58.1480|G3DSA:2.30.130.40|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 Rmag_0209 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001678|IPR004573|IPR006027|IPR018314|IPR023267|IPR029063|IPR031341|IPR035926 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB-like superfamily|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|Ribosomal RNA small subunit methyltransferase F, N-terminal|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase B GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649 G3DSA:1.10.940.10|G3DSA:3.40.50.150|PF01029|PF01189|PF17125|PR02008|PS01153|SSF48013|SSF53335|TIGR00563 Rmag_0210 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR012336|IPR036249 Thioredoxin-like fold|Thioredoxin-like superfamily G3DSA:3.40.30.10|PF13098|SSF52833 Rmag_0211 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|SSF52949|SSF53187 Rmag_0213 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005180|IPR035923 Domain of unknown function DUF302|TT1751-like domain superfamily G3DSA:3.30.310.70|PF03625|SSF103247 Rmag_0214 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 Rmag_0215 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002187|IPR011322|IPR015867 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|SM00938|SSF54913 Rmag_0216 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011435 Protein of unknown function DUF1538 PF07556 Rmag_0217 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011435 Protein of unknown function DUF1538 PF07556 Rmag_0218 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001544|IPR017824|IPR036038 Aminodeoxychorismate lyase, class IV|Aminotransferase class IV|Aminotransferase-like, PLP-dependent enzymes GO:0003824|GO:0008696|GO:0030170|GO:0046656 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752|TIGR03461 Rmag_0220 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR018094|IPR027417|IPR039430 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase-like domain GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|SSF52540|TIGR00041 Rmag_0221 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13177|SSF52540 Rmag_0222 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004639|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PS00600|SSF53383|TIGR00713 Rmag_0223 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006385|IPR023214|IPR036412 HAD superfamily|HAD-like superfamily|HAD-superfamily hydrolase, subfamily IB, SerB1-like G3DSA:1.20.1440.100|G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR01488|TIGR01490 Rmag_0224 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR027396|IPR032836 DsrE2-like family|DsrEFH-like PF13686|SSF75169 Rmag_0225 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001455|IPR036868 TusA-like domain|TusA-like domain superfamily G3DSA:3.30.110.40|PF01206|PS01148|SSF64307 Rmag_0227 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004788|IPR020672|IPR037171 NagB/RpiA transferase-like|Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|SSF100950|SSF75445|TIGR00021 Rmag_0228 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|dITP/XTP pyrophosphatase GO:0009143|GO:0017111|GO:0047429 G3DSA:3.90.950.10|MF_01405|PF01725|SSF52972|TIGR00042 Rmag_0232 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001048|IPR001057|IPR004662|IPR036393|IPR037528 Acetylglutamate kinase ArgB|Acetylglutamate kinase family|Acetylglutamate kinase-like superfamily|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 G3DSA:3.40.1160.10|MF_00082|PF00696|PIRSF000728|PR00474|SSF53633|TIGR00761 Rmag_0233 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001221|IPR008333|IPR012165|IPR017938|IPR019480|IPR037117|IPR039261 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0006221|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00970|PF10418|PIRSF006816|PR00410|SSF52343|SSF63380 Rmag_0234 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Pyridoxal phosphate homeostasis protein GO:0030170 G3DSA:3.20.20.10|MF_02087|PF01168|PIRSF004848|PS01211|SSF51419|TIGR00044 Rmag_0235 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR025263|IPR032712 AsmA-like, C-terminal|Domain of unknown function DUF3971 PF13116|PF13502 Rmag_0236 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002510|IPR025502|IPR035068|IPR036059 Metalloprotease TldD/PmbA|Metalloprotease TldD/PmbA superfamily|Metalloprotease TldD/PmbA, N-terminal|TldD GO:0006508|GO:0008237 G3DSA:3.30.2290.10|PF01523|PIRSF004919|SSF111283 Rmag_0237 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000440|IPR023043|IPR038430 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone oxidoreductase, subunit 3 superfamily|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 G3DSA:1.20.58.1610|MF_01394|PF00507 Rmag_0238 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.12280|MF_01356|PF01058|PS01150|SSF56770|TIGR01957 Rmag_0239 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001268|IPR010218|IPR020396|IPR037232 NADH dehydrogenase, subunit C|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0008137|GO:0016651|GO:0055114 G3DSA:3.30.460.80|MF_01357|PD001581|PF00329|PS00542|SSF143243|TIGR01961 Rmag_0240 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001135|IPR014029|IPR022885|IPR029014|IPR038290 NAD(P)H-quinone oxidoreductase subunit D/H|NADH-quinone oxidoreductase, subunit D|NADH-quinone oxidoreductase, subunit D superfamily|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|[NiFe]-hydrogenase, large subunit GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.20|MF_01358|PF00346|PS00535|SSF56762|TIGR01962 Rmag_0241 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002023|IPR036249 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like superfamily GO:0016491|GO:0055114 G3DSA:1.10.10.1590|G3DSA:3.40.30.10|PF01257|PIRSF000216|SSF52833|TIGR01958 Rmag_0242 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001949|IPR011537|IPR011538|IPR019554|IPR019575|IPR037207|IPR037225 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily|NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain|NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 G3DSA:1.20.1440.230|G3DSA:3.10.20.600|G3DSA:3.40.50.11540|PF01512|PF10531|PF10589|PS00644|PS00645|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 Rmag_0243 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000283|IPR006656|IPR010228|IPR019574|IPR036010 2Fe-2S ferredoxin-like superfamily|Molybdopterin oxidoreductase|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0042773|GO:0051536|GO:0055114 G3DSA:3.10.20.740|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF10588|PF13510|PS00641|PS00642|PS00643|SM00929|SSF53706|SSF54292|SSF54862|TIGR01973 Rmag_0244 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00668 Rmag_0245 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:3.30.70.3270|MF_01351|PF12838|PS00198|SSF54862|TIGR01971 Rmag_0246 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 G3DSA:1.20.120.1200|PF00499 Rmag_0247 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001133|IPR039428 NADH-ubiquinone oxidoreductase chain 4L/K|NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420 Rmag_0248 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|TIGR01974 Rmag_0249 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|TIGR01972 Rmag_0250 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|PR01434|TIGR01770 Rmag_0251 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011049|IPR019960|IPR032812|IPR038081 CalX-like domain superfamily|SbsA, Ig-like domain|Serralysin-like metalloprotease, C-terminal|Type I secretion C-terminal target domain, VC_A0849 subclass G3DSA:2.60.40.2030|PF13205|SSF141072|SSF51120|TIGR03661 Rmag_0253 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 G3DSA:1.20.1600.10|PF02321|SSF56954 Rmag_0255 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR011527|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|SM00382|SSF52540|SSF90123 Rmag_0256 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.50.100|PF13437|PR01490 Rmag_0257 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011814|IPR013216|IPR029063 Malonyl-[acyl-carrier protein] O-methyltransferase BioC|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168|GO:0009102|GO:0010340 G3DSA:3.40.50.150|MF_00835|PF08241|SSF53335|TIGR02072 Rmag_0258 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|SSF53807 Rmag_0259 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010017|IPR027555|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (mo5U34)-methyltransferase-like|tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 G3DSA:3.40.50.150|MF_01590|PF08003|SSF53335|TIGR00452 Rmag_0261 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002661|IPR023584|IPR036191 RRF superfamily|Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|G3DSA:3.30.1360.40|MF_00040|PF01765|SSF55194|TIGR00496 Rmag_0262 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001048|IPR011817|IPR015963|IPR036393 Acetylglutamate kinase-like superfamily|Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|SSF53633|TIGR02075 Rmag_0263 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR004602|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.190.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|SSF52540|TIGR00630 Rmag_0264 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 Rmag_0265 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001555|IPR002376|IPR004607|IPR036477 Formyl transferase, N-terminal|Formyl transferase, N-terminal domain superfamily|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PS00373|SSF53328|TIGR00639 Rmag_0266 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004733|IPR010918|IPR016188|IPR036676|IPR036921 Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, C-terminal domain|PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain|PurM-like, N-terminal domain superfamily GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|SSF55326|SSF56042|TIGR00878 Rmag_0267 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 G3DSA:1.20.120.1760|PF01066|PIRSF000847 Rmag_0268 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013317|IPR027417 Chromosomal replication initiator protein DnaA|P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|SSF52540 Rmag_0270 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR019478|IPR028281|IPR035996|IPR036291|IPR037115 NAD(P)-binding domain superfamily|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Sirohaem synthase, dimerisation domain superfamily|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase superfamily|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PS00840|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 Rmag_0271 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023214|IPR036412 HAD superfamily|HAD-like superfamily G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR00338|TIGR01488 Rmag_0272 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002541|IPR003567|IPR003568|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410|PR01411|TIGR00353 Rmag_0273 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001440|IPR011990|IPR017560|IPR019734 Cytochrome c-type biogenesis protein CcmI|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF00515|SM00028|SSF48452|TIGR03142 Rmag_0274 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002933|IPR005941|IPR011650|IPR036264 Bacterial exopeptidase dimerisation domain|Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|SSF53187|SSF55031|TIGR01246 Rmag_0275 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|SSF75217|TIGR00088 Rmag_0276 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 Rmag_0277 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001905|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|SSF111352|TIGR00836 Rmag_0278 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|SM01130|SSF51569|TIGR00674 Rmag_0279 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010653 NlpB/DapX lipoprotein PF06804 Rmag_0280 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001357|IPR001679|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR036420 BRCT domain|BRCT domain superfamily|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.470.90|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03120|PF14520|PIRSF001604|SM00532|SSF47781|SSF50249|SSF52113|SSF56091 Rmag_0281 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002187|IPR002332|IPR011322|IPR015867 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PR00340|PS00496|SM00938|SSF54913 Rmag_0283 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 Rmag_0284 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001789|IPR005561|IPR008327|IPR011006|IPR036388 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Signal transduction response regulator, receiver domain|Winged helix-like DNA-binding domain superfamily GO:0000160|GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF03861|PIRSF036382|SM01012|SSF52172 Rmag_0285 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002033|IPR019820 Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site GO:0016021 MF_00902|PF00902|PR01840|PS01218|TIGR00945 Rmag_0286 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003369|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB GO:0008565|GO:0015031|GO:0016020|GO:0043953 PF02416|PR01506|TIGR01410 Rmag_0287 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|TIGR01411 Rmag_0288 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 G3DSA:1.10.287.1080|MF_01020|PF01503|SSF101386|TIGR03188 Rmag_0289 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002496|IPR026660|IPR038019 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain|Phosphoribosyl-AMP cyclohydrolase domain superfamily GO:0000105|GO:0004635 G3DSA:3.10.20.400|MF_01021|PD002610|PF01502|SSF141734 Rmag_0290 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001100|IPR004099|IPR006322|IPR012999|IPR016156|IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|FAD/NAD-linked reductase, dimerisation domain superfamily|Glutathione reductase, eukaryote/bacterial|Pyridine nucleotide-disulphide oxidoreductase, class I|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004362|GO:0006749|GO:0009055|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01421 Rmag_0292 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000352|IPR004374|IPR005139 Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|G3DSA:3.30.70.1660|MF_00094|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00020 Rmag_0293 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|SM01387|SSF47060|TIGR00952 Rmag_0294 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649 Rmag_0295 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR019475|IPR030846|IPR036977|IPR037068 DNA Primase, CHC2-type zinc finger|DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|DNA primase, catalytic core, N-terminal domain superfamily|TOPRIM domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF10410|PF13662|PIRSF002811|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 Rmag_0296 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001460|IPR005311|IPR012338|IPR036138 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, dimerisation domain superfamily|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.30.450.330|G3DSA:3.40.710.10|PF00905|PF03717|SSF56519|SSF56601 Rmag_0297 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 PF04999 Rmag_0298 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|SSF53335|SSF81799|TIGR00006 Rmag_0302 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002205|IPR005742|IPR006691|IPR013757|IPR013758|IPR013760|IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal|DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain superfamily|Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01062 Rmag_0303 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007115|IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD family|6-pyruvoyl tetrahydropterin synthase/QueD superfamily G3DSA:3.30.479.10|PF01242|PIRSF006113|SSF55620|TIGR03367 Rmag_0304 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003801|IPR022838 GTP cyclohydrolase FolE2|GTP cyclohydrolase FolE2/MptA GO:0003933|GO:0003934|GO:0035998 G3DSA:3.10.270.10|MF_01527_B|PF02649|TIGR00294 Rmag_0305 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|SSF51569|TIGR00034 Rmag_0306 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR035516 DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal|DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain superfamily|Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01063 Rmag_0307 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR027417|IPR031157|IPR032090|IPR035647|IPR038467 EF-G domain III/V-like|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Peptide chain release factor 3, C-terminal domain superfamily|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain superfamily GO:0003924|GO:0005525|GO:0005737|GO:0006415 G3DSA:3.30.70.3280|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 Rmag_0308 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002125|IPR016193|IPR016473 Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Deoxycytidylate deaminase GO:0003824|GO:0004132|GO:0006220|GO:0008270 G3DSA:3.40.140.10|PF00383|PIRSF006019|SSF53927 Rmag_0309 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|TIGR00445 Rmag_0310 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001179|IPR002130|IPR020892|IPR029000 Cyclophilin-like domain superfamily|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site|FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|G3DSA:3.10.50.40|PF00160|PF00254|PR00153|PS00170|SSF50891|SSF54534 Rmag_0311 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 Rmag_0312 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|SSF53383 Rmag_0313 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004113|IPR006094|IPR016164|IPR016171|IPR036318 FAD linked oxidase, N-terminal|FAD-binding, type PCMH-like superfamily|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.465.40|G3DSA:3.30.70.2740|PF01565|PF02913|SSF55103|SSF56176 Rmag_0314 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006094|IPR016169|IPR036318 FAD linked oxidase, N-terminal|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily GO:0016491|GO:0050660|GO:0055114 G3DSA:3.30.465.10|PF01565|SSF56176 Rmag_0315 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004017|IPR009051|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain GO:0051536 G3DSA:1.10.1060.10|PF02754|PF13183|PIRSF000139|PS00198|SSF54862 Rmag_0316 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001763|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 Rmag_0317 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 Rmag_0318 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001764|IPR017853|IPR022956|IPR036962 Beta-hexosaminidase, bacterial|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.300|MF_00364|PF00933|SSF51445 Rmag_0320 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013986|IPR014017|IPR027417|IPR034739 DExx box DNA helicase domain superfamily|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 Rmag_0322 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003739|IPR013785 Aldolase-type TIM barrel|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase GO:0003824 G3DSA:3.20.20.70|PIRSF004911|SSF102114|TIGR00238 Rmag_0323 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000866|IPR017937|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|SSF52833 Rmag_0324 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006659|IPR006660|IPR036249 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like superfamily GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|SSF52833|TIGR00014 Rmag_0325 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004045|IPR004046|IPR005442|IPR036249|IPR036282 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal domain superfamily|Glutathione S-transferase, N-terminal|Glutathione S-transferase, omega-class|Thioredoxin-like superfamily GO:0004364|GO:0005515|GO:0005737 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PR01625|SSF47616|SSF52833 Rmag_0326 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|SSF81301|TIGR00090 Rmag_0327 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Nicotinate/nicotinamide nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|SSF52374|TIGR00125|TIGR00482 Rmag_0328 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001279|IPR036866 Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 Rmag_0329 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006145|IPR006224|IPR006225|IPR020103|IPR036986 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PS01129|SSF55120|TIGR00005 Rmag_0331 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR015927|IPR036286 LexA/Signal peptidase-like superfamily|Peptidase S24/S26A/S26B/S26C G3DSA:2.10.109.10|PF00717|SSF51306 Rmag_0332 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR020629|IPR035937 DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|MutM-like, N-terminal|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003677|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PS01242|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 Rmag_0333 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010389 Urate oxidase N-terminal PF06181 Rmag_0336 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PF03600 Rmag_0337 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|G3DSA:3.30.420.490|MF_01274|PF03309|SSF53067|TIGR00671 Rmag_0338 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001412|IPR002305|IPR002306|IPR014729 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|PF00579|PR01039|PS00178|SSF52374|TIGR00233 Rmag_0339 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103|IPR036986 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain superfamily|RNA-binding S4 domain|RNA-binding S4 domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 Rmag_0340 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.20|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|SSF47323|SSF50677|SSF52374|TIGR00392 Rmag_0341 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|SSF56796|TIGR01357 Rmag_0343 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003837|IPR036113 Glu-tRNAGln amidotransferase C subunit|Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 G3DSA:1.10.20.60|MF_00122|PF02686|SSF141000|TIGR00135 Rmag_0344 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004412|IPR020556|IPR023631|IPR036928 Amidase signature (AS) superfamily|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|SSF75304|TIGR00132 Rmag_0345 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003789|IPR004413|IPR006075|IPR014746|IPR017958|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-like|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Glutamine synthetase/guanido kinase, catalytic domain|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0003824|GO:0016874|GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.150.380|MF_00121|PF02637|PF02934|PS01234|SM00845|SSF55931|SSF89095|TIGR00133 Rmag_0346 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696 Rmag_0347 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008915 Peptidase M50 GO:0004222|GO:0006508 PF02163 Rmag_0348 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717|IPR036621|IPR036754 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Anticodon-binding domain superfamily|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain|YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PR01046|SSF52954|SSF55681|SSF55826|TIGR00409 Rmag_0349 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003817|IPR033177|IPR033178 Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase, prokaryotic type 1|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00662|PF02666|TIGR00163 Rmag_0350 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644|IPR002550|IPR005170|IPR016169|IPR036318 CBS domain|CNNM, transmembrane domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Transporter-associated domain GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|SM01091|SSF54631|SSF56176 Rmag_0351 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR036849 Enolase|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site|Enolase-like, C-terminal domain superfamily|Enolase-like, N-terminal GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 Rmag_0352 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253|IPR036410|IPR036869 Chaperone DnaJ|Chaperone DnaJ, C-terminal|Chaperone J-domain superfamily|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain|Heat shock protein DnaJ, cysteine-rich domain superfamily GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 Rmag_0353 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain superfamily|Heat shock protein 70kD, peptide-binding domain superfamily GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 Rmag_0354 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001980|IPR004821|IPR014729 Cytidyltransferase-like domain|Phosphopantetheine adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|SSF52374|TIGR00125|TIGR01510 Rmag_0355 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|SSF53335|TIGR00095 Rmag_0356 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008162|IPR036649 Inorganic pyrophosphatase|Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|SSF50324 Rmag_0361 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR017232|IPR035965|IPR036097|IPR036890 HAMP domain|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|PAS domain superfamily|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.1480.50|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PIRSF037532|PR00344|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874 Rmag_0362 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeobox-like domain superfamily|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|SM00448|SSF46689|SSF52172 Rmag_0363 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003148|IPR006036|IPR006037|IPR036291|IPR036721 NAD(P)-binding domain superfamily|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006813|GO:0008324|GO:0015079 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PR00335|SSF116726|SSF51735 Rmag_0364 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003445|IPR004772 Cation transporter|TrkH potassium transport family GO:0006812|GO:0008324|GO:0015379|GO:0016021|GO:0055085|GO:0071805 PF02386|PIRSF006247|TIGR00933 Rmag_0365 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006554|IPR006555|IPR006935|IPR014001|IPR027417|IPR039000 ATP-dependent DNA helicase DinG|ATP-dependent helicase, C-terminal|Helicase superfamily 1/2, ATP-binding domain|Helicase-like, DEXD box c2 type|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016787|GO:0016818 G3DSA:3.40.50.300|MF_02205|PF04851|PF13307|SM00487|SM00488|SM00491|SSF52540 Rmag_0366 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain superfamily|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 Rmag_0367 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|SSF53335 Rmag_0368 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain superfamily GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 Rmag_0369 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866 Rmag_0371 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000573|IPR004431|IPR015928 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003861|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|SSF52016|TIGR00171 Rmag_0372 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001030|IPR004430|IPR015931|IPR018136|IPR036008 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase, iron-sulfur domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0003861|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.30.499.20|MF_01026|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR00170 Rmag_0373 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001962|IPR006426|IPR017535|IPR029055 Asparagine synthase|Asparagine synthase family amidotransferase|Asparagine synthase, glutamine-hydrolyzing|Nucleophile aminohydrolases, N-terminal GO:0004066|GO:0006529 G3DSA:3.60.20.10|PF00733|PF13522|PIRSF001589|SSF52402|SSF56235|TIGR01536|TIGR03104 Rmag_0374 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002156|IPR012337|IPR022892|IPR036397 Ribonuclease H domain|Ribonuclease H superfamily|Ribonuclease H-like superfamily|Ribonuclease HI GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|SSF53098 Rmag_0376 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR022529|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3530 G3DSA:3.40.50.1820|PF12048|SSF53474 Rmag_0378 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain superfamily G3DSA:3.30.530.20|PF03364|SSF55961 Rmag_0379 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|SSF74982|TIGR00086 Rmag_0380 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 Rmag_0381 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001564|IPR023005|IPR034907|IPR036850 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site|Nucleoside diphosphate kinase-like domain|Nucleoside diphosphate kinase-like domain superfamily GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|SM00562|SSF54919 Rmag_0382 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:1.10.150.530|G3DSA:3.20.20.70|MF_01849|PF04055|PF13394|PIRSF006004|SSF102114|TIGR00048 Rmag_0384 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004588|IPR011005|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Dihydropteroate synthase-like GO:0005506|GO:0008299|GO:0016114|GO:0044237|GO:0046429|GO:0055114 G3DSA:3.20.20.20|G3DSA:3.30.413.10|MF_00159|PF04551|PIRSF004640|SSF51717|SSF56014|TIGR00612 Rmag_0385 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR018639 Domain of unknown function DUF2062 PF09835 Rmag_0386 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00204 Rmag_0387 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001539|IPR032525 Peptidase U32|Peptidase family U32, C-terminal GO:0006508|GO:0008233 G3DSA:2.40.30.10|PF01136|PF16325|PS01276 Rmag_0388 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007848|IPR029063 Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF05175|SSF53335 Rmag_0389 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002109|IPR004480|IPR014434|IPR036249 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0015036|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|SSF52833|TIGR00365 Rmag_0391 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002725 Protein of unknown function DUF45 G3DSA:3.30.2010.10|PF01863 Rmag_0392 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010073|IPR010918|IPR029062|IPR036604|IPR036676|IPR036921 Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily|PurM-like, C-terminal domain|PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain superfamily GO:0004642|GO:0006189 G3DSA:1.10.8.750|G3DSA:3.30.1330.10|G3DSA:3.40.50.880|G3DSA:3.90.650.10|MF_00419|PF02769|PF13507|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735 Rmag_0394 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002876|IPR017856|IPR026564|IPR029072 Integrase-like, N-terminal|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.70.980|MF_00693|PF01709|SSF75625|TIGR01033 Rmag_0395 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003473|IPR036094 Quinolinate synthetase A|Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 G3DSA:3.40.50.10800|PF02445|SSF142754|TIGR00550 Rmag_0396 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aspartate-tRNA ligase, type 1|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain superfamily|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|SSF50249|SSF55261|SSF55681|TIGR00459 Rmag_0397 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007462 Protein of unknown function DUF502 PF04367 Rmag_0398 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000994|IPR001714|IPR002467|IPR036005 Creatinase/aminopeptidase-like|Peptidase M24|Peptidase M24, methionine aminopeptidase|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|SSF55920|TIGR00500 Rmag_0399 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 Rmag_0400 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007156|IPR023353 LemA|LemA-like domain superfamily G3DSA:1.20.1440.20|PF04011|SSF140478 Rmag_0404 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006054|IPR006309|IPR012337|IPR013520|IPR036397 DNA polymerase 3, epsilon subunit|DNA polymerase III epsilon subunit, exonuclease domain|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098|TIGR00573|TIGR01406 Rmag_0405 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003716|IPR006110|IPR012293|IPR036161 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6|RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|SM01409|SSF63562|TIGR00690 Rmag_0409 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|SM01004|SSF51569 Rmag_0410 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002817|IPR025747|IPR037509|IPR038521 Phosphomethylpyrimidine synthase|Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B|ThiC-associated domain|ThiC/Bza superfamily GO:0009228|GO:0016830|GO:0051536 G3DSA:3.20.20.540|MF_00089|PF01964|PF13667|TIGR00190 Rmag_0411 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001296|IPR007507|IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal|3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily|Glycosyl transferase, family 1 G3DSA:3.40.50.11720|G3DSA:3.40.50.2000|PF00534|PF04413|SSF53756 Rmag_0412 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005225|IPR006073|IPR006074|IPR006169|IPR014100|IPR027417|IPR035101|IPR036726 GTP binding domain|GTP-binding protein Obg/CgtA|GTP-binding protein, Obg-type|GTP1/OBG domain|GTP1/OBG domain superfamily|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|SSF52540|SSF82051|TIGR00231|TIGR02729 Rmag_0413 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001048|IPR001057|IPR005715|IPR011529|IPR019797|IPR036393 Acetylglutamate kinase-like superfamily|Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase GO:0004349|GO:0005737|GO:0006561 G3DSA:3.40.1160.10|MF_00456|PF00696|PIRSF000729|PR00474|PS00902|SSF53633|TIGR01027 Rmag_0414 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000550|IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily|7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|SSF55083|TIGR01498 Rmag_0415 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 Rmag_0416 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003721|IPR004821|IPR014729 Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004592|GO:0009058|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018|TIGR00125 Rmag_0417 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001075|IPR017726|IPR034904|IPR035903 Fe-S cluster assembly domain superfamily|Fe/S biogenesis protein NfuA|HesB-like domain superfamily|NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536|GO:0051539|GO:0051604 G3DSA:2.60.300.12|G3DSA:3.30.300.130|MF_01637|PD002830|PF01106|SSF117916|SSF89360 Rmag_0419 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006283|IPR016188|IPR036676|IPR036921 PurM-like, C-terminal domain superfamily|PurM-like, N-terminal domain|PurM-like, N-terminal domain superfamily|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PIRSF005303|SSF55326|SSF56042|TIGR01379 Rmag_0420 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000962|IPR012784|IPR037187 DksA, N-terminal domain superfamily|RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type GO:0008270 G3DSA:1.20.120.910|MF_00926|PF01258|SSF109635|SSF57716|TIGR02420 Rmag_0421 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006439|IPR023198|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase-like, domain 2 GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509 Rmag_0423 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004439|IPR024084 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic|Isopropylmalate dehydrogenase-like domain GO:0004450|GO:0006099|GO:0016616|GO:0055114 G3DSA:3.40.718.10|PF00180|SM01329|SSF53659|TIGR00183 Rmag_0425 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 Rmag_0426 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417|IPR036876 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UVR domain superfamily|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006289|GO:0009380|GO:0016787|GO:0016887 G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 Rmag_0427 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007197|IPR013785|IPR024924|IPR027621 7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel|Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|MF_00917|PF04055|PF13394|PIRSF000370|SSF102114|TIGR04349 Rmag_0428 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 Rmag_0430 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000453|IPR020541|IPR035904 Chorismate synthase|Chorismate synthase AroC superfamily|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00789|SSF103263|TIGR00033 Rmag_0432 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001754|IPR011060|IPR013785|IPR014732|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0044205 G3DSA:3.20.20.70|PF00215|PS00156|SM00934|SSF51366|TIGR01740 Rmag_0433 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002938|IPR010971|IPR036188 FAD-binding domain|FAD/NAD(P)-binding domain superfamily|Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.50|G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|TIGR01988 Rmag_0434 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase, putative|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016638|GO:0048037|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|SSF50475|TIGR00558 Rmag_0435 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006151|IPR011342|IPR013708|IPR022893|IPR036291 NAD(P)-binding domain superfamily|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|SSF51735|SSF53223|TIGR00507 Rmag_0436 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|G3DSA:3.40.1260.20|PF00575|PF10150|SM00316|SSF50249|TIGR00757 Rmag_0437 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002347|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 Rmag_0438 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003788|IPR029063|IPR038375 Protein arginine methyltransferase NDUFAF7|Protein arginine methyltransferase NDUFAF7 superfamily|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.12710|PF02636|SSF53335 Rmag_0439 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673 Rmag_0440 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR012779|IPR014782|IPR024601|IPR027268|IPR035414|IPR037144|IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily|Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily|Peptidase M1, alanyl aminopeptidase, Ig-like fold|Peptidase M1, membrane alanine aminopeptidase, N-terminal|Peptidase M4/M1, CTD superfamily GO:0008237|GO:0008270 G3DSA:1.10.1740.60|G3DSA:1.10.390.10|G3DSA:1.25.50.10|G3DSA:2.60.40.1730|G3DSA:2.60.40.1840|PF01433|PF11940|PF17432|PR00756|SSF55486|SSF63737|TIGR02414 Rmag_0441 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008136|IPR036653 CinA, C-terminal|CinA-like, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 Rmag_0442 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001269|IPR004653|IPR013785 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.20.120.1460|G3DSA:3.20.20.70|MF_02041|PF01207|PIRSF006621|SSF51395|TIGR00742 Rmag_0443 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0051301 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|SM00842|SSF53067|TIGR01174 Rmag_0444 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|SSF54211|TIGR00325 Rmag_0445 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain superfamily|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518|TIGR00118 Rmag_0446 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004789|IPR019455|IPR027271 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal|Acetolactate synthase/Transcription factor NikR, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|SSF55021|TIGR00119 Rmag_0447 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR014359|IPR036291 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Ketol-acid reductoisomerase|Ketol-acid reductoisomerase, C-terminal|Ketol-acid reductoisomerase, N-terminal|Ketol-acid reductoisomerase, prokaryotic|NAD(P)-binding domain superfamily GO:0004455|GO:0009082|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.3730.40|G3DSA:3.40.50.720|MF_00435|PF01450|PF07991|PIRSF000116|SSF48179|SSF51735|TIGR00465 Rmag_0448 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 G3DSA:1.20.120.1760|PF01066|PS00379|TIGR00473 Rmag_0449 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785|IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|G3DSA:3.30.160.270|MF_01025|PF00682|PF08502|PS00815|PS00816|SM00917|SSF110921|SSF51569|TIGR00973 Rmag_0450 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR036895 Uracil-DNA glycosylase-like domain superfamily SSF52141 Rmag_0452 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904|IPR036901 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase superfamily|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|SSF53671|TIGR00658 Rmag_0453 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00707 Rmag_0454 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003489|IPR036567 Ribosome hibernation promoting factor/RaiA|Ribosome hibernation promotion factor-like GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741 Rmag_0455 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644|IPR006667|IPR006668|IPR006669|IPR036739|IPR038048|IPR038076 CBS domain|Magnesium transporter MgtE|Magnesium transporter MgtE, transmembrane domain|Magnesium transporter, MgtE intracellular domain|MgtE, N-terminal domain superfamily|SLC41 divalent cation transporters, integral membrane domain|SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 Rmag_0456 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR036900 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, C-terminal domain superfamily|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|SSF53738|SSF55957 Rmag_0457 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR026268 Protein RseC PF04246|PIRSF004923 Rmag_0458 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004660|IPR005474|IPR009014|IPR029061 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, N-terminal GO:0003824|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|SSF52518|SSF52922|TIGR00759 Rmag_0460 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007236 SlyX PF04102 Rmag_0461 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408|IPR036345|IPR036612 Exoribonuclease, PH domain 2 superfamily|Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|K Homology domain, type 1 superfamily|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain superfamily|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 Rmag_0462 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 Rmag_0463 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003646|IPR016476 SH3 domain protein|SH3-like domain, bacterial-type G3DSA:2.30.30.40|PF08239|TIGR04211 Rmag_0464 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499|IPR037118 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl-tRNA synthetase, tRNA-binding arm superfamily|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 Rmag_0466 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR021029|IPR022754|IPR027417|IPR038249 AAA+ ATPase domain|ClpA/B family|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, tau subunit, C-terminal domain superfamily|DNA polymerase III, tau subunit, domain V|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.30.300.150|G3DSA:3.40.50.300|PF12169|PF12170|PF13177|PR00300|SM00382|SSF48019|SSF52540|TIGR02397 Rmag_0467 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 Rmag_0468 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain superfamily G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|SSF56112 Rmag_0469 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001544|IPR018300|IPR036038 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Aminotransferase-like, PLP-dependent enzymes GO:0003824 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|SSF56752 Rmag_0470 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044|IPR037167 Beta-lactamase/transpeptidase-like|D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily|Penicillin-binding protein, C-terminal domain superfamily|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|SM00936|SSF56601|SSF69189 Rmag_0471 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site|Probable peptidoglycan glycosyltransferase FtsW/RodA|Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021|GO:0051301 MF_02079|PF01098|PS00428|TIGR02210 Rmag_0472 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007523|IPR036748 MTH938-like superfamily|NDUFAF3/Mth938 domain-containing protein G3DSA:3.40.1230.10|PF04430|SSF64076 Rmag_0473 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 Rmag_0474 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0043039 G3DSA:1.10.10.350|G3DSA:3.40.50.620|MF_00022|PF00749|PR00987|PS00178|SSF48163|SSF52374|TIGR00464 Rmag_0475 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3090.10|MF_00277|PF01909|PF01966|PF08335|PIRSF006288|SM00471|SSF55021|SSF81301|SSF81593|SSF81891|TIGR01693 Rmag_0476 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005746|IPR013766|IPR017937|IPR036249 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 Rmag_0477 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417|IPR036269 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock domain|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, N-terminal domain superfamily|Rho termination factor, RNA-binding domain|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 Rmag_0478 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04407 Rmag_0479 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|SSF55620|TIGR03139 Rmag_0480 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002646|IPR010206|IPR025866|IPR032828 Poly A polymerase, head domain|Poly(A) polymerase I|Polymerase A arginine-rich C-terminal domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0004652|GO:0006378|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_00957|PF01743|PF12626|PF12627|SSF81301|SSF81891|TIGR01942 Rmag_0481 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003761|IPR037004 Exonuclease VII, small subunit|Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PIRSF006488|SSF116842|TIGR01280 Rmag_0482 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain superfamily|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|SSF48576 Rmag_0483 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|SSF53901|TIGR00747 Rmag_0484 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003664|IPR012281 Fatty acid synthesis PlsX protein|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016747 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|SSF53659|TIGR00182 Rmag_0485 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 Rmag_0486 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003772 Large ribosomal RNA subunit accumulation protein YceD PF02620 Rmag_0487 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PF01553|SM00563|SSF69593 Rmag_0488 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006439|IPR023198|IPR023214|IPR036412 HAD hydrolase, subfamily IA|HAD superfamily|HAD-like superfamily|Phosphoglycolate phosphatase-like, domain 2 GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509|TIGR01549 Rmag_0489 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003798 DNA recombination RmuC PF02646 Rmag_0490 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002347|IPR020904|IPR036291 NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 Rmag_0491 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site|Inositol monophosphatase-like GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|SSF56655 Rmag_0492 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001537|IPR004384|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase TrmJ/LasT|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:1.10.8.590|G3DSA:3.40.1280.10|PF00588|PIRSF004808|SSF75217|TIGR00050 Rmag_0493 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575|IPR036890|IPR037196 HSP90, C-terminal domain|Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.120.790|G3DSA:3.30.230.80|G3DSA:3.30.565.10|G3DSA:3.40.50.11260|MF_00505|PF00183|PF13589|PIRSF002583|PR00775|PS00298|SM00387|SSF110942|SSF54211|SSF55874 Rmag_0495 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|SSF55821 Rmag_0496 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001260|IPR018375|IPR036406 Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site|Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PS01021|SSF102886 Rmag_0497 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001455|IPR036868 TusA-like domain|TusA-like domain superfamily G3DSA:3.30.110.40|PF01206|SSF64307 Rmag_0498 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303|IPR036651 Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, N-terminal domain superfamily|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|SM01230|SSF54368|SSF55931|TIGR00653 Rmag_0499 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elp3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|SM00729|SM00876|SSF102114|TIGR00433 Rmag_0500 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|SSF53756|TIGR01133 Rmag_0501 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 PF01098 Rmag_0502 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|SM00382|SSF52540 Rmag_0504 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha, N-terminal domain-like superfamily|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel G3DSA:2.40.30.20|PF00677|PIRSF000498|SSF63380|TIGR00187 Rmag_0505 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000422|IPR017945|IPR032677|IPR036144 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain superfamily|GTP cyclohydrolase II|RibA-like superfamily GO:0008686|GO:0009231 G3DSA:3.40.50.10990|G3DSA:3.90.870.10|MF_00180|PF00925|PF00926|PIRSF001259|SSF142695|SSF55821|TIGR00506 Rmag_0506 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002180|IPR034964|IPR036467 Lumazine synthase|Lumazine/riboflavin synthase|Lumazine/riboflavin synthase superfamily GO:0000906|GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121|TIGR00114 Rmag_0507 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006027|IPR011605|IPR035926 NusB antitermination factor|NusB-like superfamily|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|SSF48013|TIGR01951 Rmag_0509 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001310|IPR019808|IPR036265 HIT-like superfamily|Histidine triad (HIT) protein|Histidine triad, conserved site G3DSA:3.30.428.10|PF01230|PR00332|PS00892|SSF54197 Rmag_0510 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|SSF50249|TIGR00621 Rmag_0511 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 Rmag_0512 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011990|IPR017689|IPR039565 Outer membrane lipoprotein BamD-like|Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|SSF48452|TIGR03302 Rmag_0513 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain superfamily|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0015969 G3DSA:1.10.3210.10|G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 Rmag_0514 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007479|IPR036762 ISC system FeS cluster assembly, IscX|IscX-like superfamily GO:0016226 G3DSA:1.10.10.600|PF04384|PIRSF039003|SSF140319|TIGR03412 Rmag_0515 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007195|IPR011042|IPR011659|IPR014167|IPR036752 Six-bladed beta-propeller, TolB-like|Tol-Pal system protein TolB|TolB, N-terminal|TolB, N-terminal domain superfamily|WD40-like Beta Propeller GO:0015031|GO:0017038|GO:0042597 G3DSA:2.120.10.30|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|SSF52964|SSF69304|TIGR02800 Rmag_0516 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006664|IPR006665|IPR036737 OmpA-like domain|OmpA-like domain superfamily|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088 Rmag_0517 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011990|IPR039565 Outer membrane lipoprotein BamD-like|Tetratricopeptide-like helical domain superfamily GO:0005515 G3DSA:1.25.40.10|PF13525|SSF48452 Rmag_0518 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0009058 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|SSF56322 Rmag_0519 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 Rmag_0520 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000132|IPR003010|IPR003694|IPR010982|IPR014445|IPR014729|IPR022310|IPR036526 Carbon-nitrogen hydrolase|Carbon-nitrogen hydrolase superfamily|Glutamine-dependent NAD(+) synthetase|Lambda repressor-like, DNA-binding domain superfamily|NAD(+) synthetase|NAD/GMP synthase|Nitrilase/cyanide hydratase, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0003677|GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:1.10.260.40|G3DSA:3.40.50.620|G3DSA:3.60.110.10|MF_02090|PF00795|PF02540|PIRSF006630|PS00920|SSF47413|SSF52402|SSF56317|TIGR00552 Rmag_0522 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|SSF53800|TIGR00109 Rmag_0523 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000788|IPR005144|IPR008926|IPR013346|IPR013509 ATP-cone domain|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PF03477|PR01183|PS00089|SSF48168|SSF51998|TIGR02506 Rmag_0524 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000358|IPR009078|IPR012348|IPR030475 Ferritin-like superfamily|Ribonucleotide reductase small subunit family|Ribonucleotide reductase small subunit, acitve site|Ribonucleotide reductase-like GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PS00368|SSF47240 Rmag_0525 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001041|IPR006058|IPR012675|IPR036010 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain superfamily GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 Rmag_0526 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014871 dUTPase/dCTP pyrophosphatase G3DSA:1.10.4010.10|PF08761|SSF101386 Rmag_0527 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005987|IPR012337|IPR013520|IPR036397 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily|Ribonuclease T GO:0003676|GO:0004540|GO:0006396 G3DSA:3.30.420.10|MF_00157|PF00929|SM00479|SSF53098|TIGR01298 Rmag_0528 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain G3DSA:3.40.630.30|PF00583|SSF55729 Rmag_0529 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000581|IPR004404|IPR020558|IPR037237 Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site|IlvD/EDD, N-terminal domain GO:0003824|GO:0004160|GO:0009082 G3DSA:3.50.30.80|MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 Rmag_0530 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001900|IPR003029|IPR004476|IPR011129|IPR011805|IPR012340|IPR013223|IPR022966|IPR022967 Cold shock domain|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PS01175|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02063 Rmag_0531 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|SM00788|SSF52540|TIGR00184 Rmag_0532 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004516|IPR004517 ATP phosphoribosyltransferase regulatory subunit|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 G3DSA:3.30.930.10|MF_00125|PF13393|PIRSF001549|SSF55681 Rmag_0533 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001107|IPR010200|IPR036013 Band 7 domain|Band 7/SPFH domain superfamily|HflC GO:0016021|GO:0052547 G3DSA:3.30.479.30|PF01145|PIRSF005651|SM00244|SSF117892|TIGR01932 Rmag_0534 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001107|IPR010201|IPR020980|IPR036013 Band 7 domain|Band 7/SPFH domain superfamily|HflK|Menbrane protein HflK, N-terminal GO:0016021 G3DSA:3.30.479.30|PF01145|PF12221|SM00244|SSF117892|TIGR01933 Rmag_0535 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005653|IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal|Organic solvent tolerance-like, N-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 MF_01411|PF03968|PF04453 Rmag_0536 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR027304 Trigger factor/SurA domain superfamily G3DSA:1.10.4030.30|G3DSA:3.10.50.40|PF13616|SSF109998|SSF54534 Rmag_0537 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001537|IPR004441|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|SM00967|SSF55315|SSF75217|TIGR00186 Rmag_0538 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006254|IPR015813|IPR018523 Isocitrate lyase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824|GO:0004451|GO:0019752 G3DSA:3.20.20.60|PF00463|PIRSF001362|PS00161|SSF51621|TIGR01346 Rmag_0541 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007454|IPR027471 Uncharacterised protein family UPF0250|YbeD-like domain superfamily G3DSA:3.30.70.260|MF_00659|PF04359|SSF117991 Rmag_0542 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0006464|GO:0009249|GO:0033819 G3DSA:3.30.930.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|SSF55681|TIGR00214 Rmag_0543 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003698|IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elp3/MiaB/NifB|Lipoyl synthase|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PIRSF005963|SM00729|SSF102114|TIGR00510 Rmag_0544 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0016020|GO:0022857|GO:0055085 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866 Rmag_0545 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.30.170|G3DSA:2.40.420.20|G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 Rmag_0546 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005255|IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase|PdxA family GO:0042823|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|SSF53659|TIGR00557 Rmag_0547 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|SM00650|SSF53335|TIGR00755 Rmag_0548 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007474|IPR036767 ApaG domain|ApaG domain superfamily G3DSA:2.60.40.1470|PF04379|SSF110069 Rmag_0549 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004617|IPR004843|IPR029052 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0008803|GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF000903|SSF56300|TIGR00668 Rmag_0550 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|SSF54506|TIGR00652 Rmag_0551 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010376|IPR038492 GBBH-like, N-terminal domain superfamily|Gamma-butyrobetaine hydroxylase-like, N-terminal G3DSA:3.30.2020.30|PF06155 Rmag_0552 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001478|IPR004387|IPR008915|IPR036034 PDZ domain|PDZ superfamily|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|SM00228|SSF50156|TIGR00054 Rmag_0553 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|POTRA domain, BamA/TamA-like GO:0019867|GO:0071709 G3DSA:2.40.160.50|G3DSA:3.10.20.310|MF_01430|PF01103|PF07244|PIRSF006076|TIGR03303 Rmag_0554 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001451|IPR007691|IPR011004|IPR020573 Hexapeptide repeat|Trimeric LpxA-like superfamily|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016747 G3DSA:2.160.10.10|G3DSA:3.40.1390.10|MF_00523|PF00132|PF04613|PF14602|SSF51161|TIGR01853 Rmag_0555 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain superfamily GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|SSF54637|TIGR01750 Rmag_0556 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001451|IPR010137|IPR011004|IPR029098|IPR037157 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like superfamily|UDP N-acetylglucosamine O-acyltransferase, C-terminal|UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|SSF51161|TIGR01852 Rmag_0557 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ MF_02078|PF03023|PIRSF002869|PR01806|TIGR01695 Rmag_0558 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007457|IPR036766 Fe(II) trafficking protein YggX|Fe(II) trafficking protein YggX superfamily GO:0005506 G3DSA:1.10.3880.10|MF_00686|PD029191|PF04362|PIRSF029827|SSF111148 Rmag_0559 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|SM00072|SSF52540|TIGR03263 Rmag_0560 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000943|IPR007627|IPR007630|IPR012759|IPR013324|IPR013325|IPR014284|IPR036388 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4-like|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.20.120.1810|PF04542|PF04545|PIRSF000770|PR00046|PS00715|SSF88659|SSF88946|TIGR02392|TIGR02937 Rmag_0561 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011032|IPR018369|IPR020818|IPR037124 Chaperonin GroES, conserved site|GroES chaperonin family|GroES chaperonin superfamily|GroES-like superfamily GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 Rmag_0562 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027410|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain superfamily|GroEL-like equatorial domain superfamily|TCP-1-like chaperonin intermediate domain superfamily GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.30.260.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 Rmag_0563 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568|IPR036890 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, C-terminal|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01098|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01055 Rmag_0564 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|SSF52402|TIGR00364 Rmag_0565 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003231|IPR006162|IPR009081|IPR036736 ACP-like superfamily|Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|SSF47336|TIGR00517 Rmag_0566 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|SM00825|SSF53901|TIGR03150 Rmag_0568 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001567|IPR024077 Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 G3DSA:1.10.1370.10|G3DSA:1.10.1370.40|PF01432|SSF55486 Rmag_0570 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001412|IPR009080|IPR013155|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038|IPR033911 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionine-tRNA ligase, type 1|Methioninyl-tRNA synthetase core domain|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:3.40.50.620|MF_00098|PF08264|PF09334|PR01041|PS00178|SSF47323|SSF52374|SSF57770|TIGR00398 Rmag_0571 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000808|IPR002744|IPR019591|IPR027417|IPR033756|IPR034904 Fe-S cluster assembly domain superfamily|Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35|MIP18 family-like|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.30.300.130|G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|SSF117916|SSF52540 Rmag_0572 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001041|IPR001055|IPR011536|IPR012675|IPR018298|IPR036010 2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain superfamily|Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PS00814|SSF54292|TIGR02007 Rmag_0573 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010236|IPR013126|IPR018181|IPR029047|IPR029048 Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain superfamily|Heat shock protein 70kD, peptide-binding domain superfamily|ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00679|PF00012|PR00301|PS00297|PS00329|SSF100920|SSF100934|SSF53067|TIGR01991 Rmag_0574 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004640|IPR009073|IPR036386|IPR036869 Chaperone J-domain superfamily|Co-chaperone Hsc20|Co-chaperone HscB, C-terminal oligomerisation domain|HscB, C-terminal domain superfamily GO:0001671|GO:0051087|GO:0051259|GO:0097428 G3DSA:1.10.287.110|G3DSA:1.20.1280.20|MF_00682|PF07743|SSF46565|SSF47144|TIGR00714 Rmag_0575 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000361|IPR011302|IPR016092|IPR017870|IPR035903 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site|HesB-like domain superfamily|Iron-binding protein IscA, proteobacteria GO:0005198|GO:0005506|GO:0051536|GO:0097428 G3DSA:2.60.300.12|PF01521|PS01152|SSF89360|TIGR00049|TIGR02011 Rmag_0576 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002871|IPR011339 ISC system FeS cluster assembly, IscU scaffold|NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|SSF82649|TIGR01999 Rmag_0577 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000192|IPR010240|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase IscS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0030170|GO:0031071|GO:0044571 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00331|PF00266|PIRSF005572|PS00595|SSF53383|TIGR02006 Rmag_0578 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000944|IPR036388|IPR036390 Transcription regulator Rrf2-type|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily G3DSA:1.10.10.10|PF02082|SSF46785|TIGR00738 Rmag_0579 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001451|IPR005881|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Trimeric LpxA-like superfamily GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PIRSF000441|PS00101|SSF51161|TIGR01172 Rmag_0580 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649 Rmag_0581 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011063|IPR014729|IPR035107 Rossmann-like alpha/beta/alpha sandwich fold|tRNA thiolation protein, TtcA/Ctu1 type|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0008033 G3DSA:3.40.50.620|PF01171|PIRSF004976|SSF52402 Rmag_0582 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PF02321|SSF56954 Rmag_0583 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000623|IPR023000|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|SSF52540 Rmag_0584 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001544|IPR005785|IPR018300|IPR036038 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Aminotransferase-like, PLP-dependent enzymes|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|SSF56752|TIGR01122 Rmag_0585 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001048|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795|IPR036393 ACT domain|Acetylglutamate kinase-like superfamily|Aspartate kinase|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|CASTOR, ACT domain GO:0004072|GO:0008652|GO:0009089 G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PS00324|SSF53633|SSF55021|TIGR00656|TIGR00657 Rmag_0587 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001915|IPR032456 CAAX prenyl protease 1, N-terminal|Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PF16491 Rmag_0588 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 SSF46626 Rmag_0589 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004881|IPR010914|IPR012340|IPR027417 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA|RsgA GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|SSF50249|SSF52540|TIGR00157 Rmag_0590 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006696 Protein of unknown function DUF423 PF04241 Rmag_0591 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 Rmag_0592 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|SM00316|SSF50249|TIGR00717 Rmag_0593 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|SSF52540|TIGR00017 Rmag_0594 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149 Aminoacyl-tRNA synthetase, class II (D/K/N)|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|SSF50249|SSF55681|TIGR00499 Rmag_0595 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005616|IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily|CcmH/CycL/Ccl2/NrfF family G3DSA:1.10.8.640|PF03918 Rmag_0596 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781|IPR037118 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase|Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0003677|GO:0004832|GO:0005524|GO:0005737|GO:0006438|GO:0016887 G3DSA:1.10.287.380|G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|SM00382|SSF52540 Rmag_0597 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023214|IPR036412 HAD superfamily|HAD-like superfamily G3DSA:3.40.50.1000|SSF56784 Rmag_0598 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994|IPR035901|IPR036876|IPR038476 GIY-YIG endonuclease|GIY-YIG endonuclease superfamily|RuvA domain 2-like|UVR domain|UVR domain superfamily|UvrABC system, subunit C|UvrC family homology region|UvrC homology region 2 superfamily GO:0005515|GO:0006289|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.30.420.340|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 Rmag_0599 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494 Rmag_0600 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001986|IPR005750|IPR013792|IPR036968 Enolpyruvate transferase domain|Enolpyruvate transferase domain superfamily|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|SSF55205|TIGR01072 Rmag_0601 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013820|IPR018198|IPR024893 ATP phosphoribosyltransferase HisG, short form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_01018|PF01634|PS01316|SSF53850|TIGR00070 Rmag_0602 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|SSF53720|TIGR00069 Rmag_0604 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417|IPR036225|IPR036891 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|SRP/SRP receptor, N-terminal|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, M-domain superfamily|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|SM00382|SM00962|SM00963|SSF47364|SSF47446|SSF52540|TIGR00959 Rmag_0605 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578 Rmag_0606 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR013842|IPR027417|IPR031157|IPR035647|IPR038363 EF-G domain III/V-like|Elongation factor 4|Elongation factor EFG, domain V-like|GTP-binding protein LepA, C-terminal|LepA, C-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.2570|G3DSA:3.30.70.3380|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|SSF52540|SSF54980|TIGR00231|TIGR01393 Rmag_0607 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000866|IPR024706|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|SSF52833 Rmag_0608 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010233|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF13489|SSF53335|TIGR01983 Rmag_0610 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002582|IPR004568|IPR008278|IPR037143 4'-phosphopantetheinyl transferase domain|4'-phosphopantetheinyl transferase domain superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 Rmag_0611 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004569|IPR013785|IPR036130 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ|Pyridoxine 5'-phosphate synthase GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|SSF63892|TIGR00559 Rmag_0613 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain superfamily, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PR00326|SSF52540|SSF54814|TIGR00231|TIGR00436 Rmag_0614 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000999|IPR011907|IPR014720|IPR036389 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain|Ribonuclease III, endonuclease domain superfamily GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 Rmag_0615 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014174 CRISPR-associated protein, Cas6-related PF09559 Rmag_0616 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000398|IPR020940|IPR023451|IPR036926 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain|Thymidylate synthase/dCMP hydroxymethylase superfamily GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|SSF55831|TIGR03284 Rmag_0617 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|TIGR00544 Rmag_0618 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001845|IPR036388|IPR036390 HTH ArsR-type DNA-binding domain|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|SM00418|SSF46785 Rmag_0619 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC G3DSA:3.10.450.710|PF05494 Rmag_0620 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001478|IPR004447|IPR005151|IPR029045|IPR036034 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain superfamily|PDZ domain|PDZ superfamily|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 Rmag_0621 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000223|IPR015927|IPR019533|IPR019756|IPR019757|IPR019758|IPR036286 LexA/Signal peptidase-like superfamily|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|G3DSA:2.170.230.10|PF00717|PF10502|PR00727|PS00501|PS00760|PS00761|SSF51306|TIGR02227 Rmag_0622 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007453|IPR025526 DsrC-like domain superfamily|Sulphur transfer protein DsrC/TusE G3DSA:1.10.10.370|G3DSA:3.30.1420.10|PF04358|PIRSF006223|SSF69721|TIGR03342 Rmag_0623 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001986|IPR006264|IPR013792|IPR023193|IPR036968 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|Enolpyruvate transferase domain superfamily|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0009073|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|SSF55205|TIGR01356 Rmag_0624 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003099|IPR008927|IPR036291 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|NAD(P)-binding domain superfamily|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:1.10.3660.10|G3DSA:3.40.50.720|PF02153|SSF48179|SSF51735 Rmag_0625 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|SSF53383|TIGR01141 Rmag_0626 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001086|IPR002701|IPR008242|IPR010957|IPR018528|IPR036263|IPR036979 Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase II, prokaryotic-type|Chorismate mutase domain superfamily|Chorismate mutase type II superfamily|Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0009094|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PIRSF001500|PS00857|SM00830|SSF48600|SSF53850|SSF55021|TIGR01807 Rmag_0627 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006139|IPR006140|IPR029752|IPR029753|IPR036291 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain superfamily GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|SSF51735|SSF52283|SSF55021 Rmag_0628 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022278 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PS00595|SSF53383|TIGR01364 Rmag_0631 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|TIGR00244 Rmag_0632 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798|IPR039429 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site|Serine hydroxymethyltransferase-like domain GO:0003824|GO:0004372|GO:0019264|GO:0030170|GO:0035999 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 Rmag_0635 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000594|IPR035985 THIF-type NAD/FAD binding fold|Ubiquitin-activating enzyme GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 Rmag_0636 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002569|IPR036509 Peptide methionine sulphoxide reductase MsrA|Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|SSF55068|TIGR00401 Rmag_0637 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme G3DSA:1.25.10.90|PF08713|SSF48371 Rmag_0638 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR015867|IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal G3DSA:3.30.70.120|SSF102705 Rmag_0639 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 Rmag_0641 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 Rmag_0642 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825|IPR036690 B3/B4 tRNA-binding domain|Ferrodoxin-fold anticodon-binding domain|Ferrodoxin-fold anticodon-binding domain superfamily|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain superfamily|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 Rmag_0643 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm|Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|SSF46589|SSF55681|TIGR00468 Rmag_0645 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005813|IPR035566 Ribosomal protein L20|Ribosomal protein L20, C-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|G3DSA:1.10.720.90|MF_00382|PD002389|PF00453|PR00062|SSF74731|TIGR01032 Rmag_0646 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001706|IPR018265|IPR021137|IPR037229 Ribosomal protein L35|Ribosomal protein L35 superfamily|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.530|MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 Rmag_0647 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001288|IPR019813|IPR019814|IPR019815|IPR036787|IPR036788 Translation initiation factor 3|Translation initiation factor 3 (IF-3), C-terminal domain superfamily|Translation initiation factor 3 (IF-3), N-terminal domain superfamily|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|SSF54364|SSF55200|TIGR00168 Rmag_0648 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163|IPR036621 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Anticodon-binding domain superfamily|Beta-grasp domain superfamily|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 Rmag_0649 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001667|IPR003156|IPR004610|IPR038763 Bacterial RecJ exonuclease|DDH domain|DHH phosphoesterase superfamily|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 G3DSA:3.10.310.30|G3DSA:3.90.1640.30|PF01368|PF02272|SSF64182|TIGR00644 Rmag_0650 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011460 Protein of unknown function DUF1566 PF07603 Rmag_0651 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006076|IPR036188 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain superfamily GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905|SSF54373 Rmag_0652 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|TIGR00077 Rmag_0654 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002347|IPR014358|IPR036291 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:1.10.8.400|G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 Rmag_0656 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR027304 Trigger factor/SurA domain superfamily G3DSA:1.10.4030.10|G3DSA:3.10.50.40|PF13616|PF13624|SSF109998|SSF54534 Rmag_0659 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004329|IPR036127 CcmE-like superfamily|CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 G3DSA:2.40.50.140|MF_01959|PF03100|SSF82093 Rmag_0660 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PF04995|TIGR03141 Rmag_0661 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386|TIGR01191 Rmag_0662 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 G3DSA:3.30.420.40|PF00814|SSF53067|TIGR03725 Rmag_0663 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001264|IPR023346|IPR036950 Glycosyl transferase, family 51|Lysozyme-like domain superfamily|Penicillin binding protein transglycosylase domain G3DSA:1.10.3810.10|PF00912|SSF53955 Rmag_0664 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000529|IPR014717|IPR020814|IPR020815|IPR035980 Ribosomal protein S6|Ribosomal protein S6 superfamily|Ribosomal protein S6, conserved site|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PS01048|SSF54995|TIGR00166 Rmag_0665 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001648|IPR036870 Ribosomal protein S18|Ribosomal protein S18 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|SSF46911|TIGR00165 Rmag_0666 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009027|IPR020069|IPR020070|IPR020594|IPR036791|IPR036935 Ribosomal protein L9, C-terminal|Ribosomal protein L9, C-terminal domain superfamily|Ribosomal protein L9, N-terminal|Ribosomal protein L9, N-terminal domain superfamily|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|SSF55653|SSF55658|TIGR00158 Rmag_0667 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007692|IPR007693|IPR007694|IPR016136|IPR027417|IPR036185 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|DNA helicase, DnaB-like, N-terminal domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|SSF48024|SSF52540|TIGR00665 Rmag_0668 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|SM01005|SSF50621|SSF51419|TIGR00492 Rmag_0669 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004843|IPR026575|IPR029052 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PF00149|SSF56300 Rmag_0670 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 PF06189 Rmag_0671 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004154|IPR004516|IPR015807|IPR036621 Anticodon-binding|Anticodon-binding domain superfamily|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|SSF52954|SSF55681|TIGR00442 Rmag_0672 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011990|IPR018704|IPR026039 Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain superfamily|Uncharacterised protein family UPF0070 GO:0005515 G3DSA:1.25.40.10|PF09976|PIRSF006170|SSF48452 Rmag_0673 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|SSF52540|TIGR00231|TIGR03594 Rmag_0674 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|SSF52317|SSF52540|TIGR00337 Rmag_0676 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter, lipid A export, MsbA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0034040|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02203 Rmag_0677 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000312|IPR017459|IPR035902|IPR036320 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase family 3, N-terminal domain superfamily|Glycosyl transferase, family 3|Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|PF00591|PF02885|SSF47648|SSF52418 Rmag_0678 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR017941|IPR036922 Rieske [2Fe-2S] iron-sulphur domain|Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 Rmag_0679 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008258|IPR023346 Lysozyme-like domain superfamily|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 Rmag_0680 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002059|IPR011129|IPR012156|IPR012340 Cold shock domain|Cold shock, CspA|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|SM00357|SSF50249 Rmag_0682 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000866|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 Rmag_0683 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002043|IPR005122|IPR018085|IPR036895 Uracil-DNA glycosylase family 1|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like|Uracil-DNA glycosylase-like domain superfamily GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|SM00986|SM00987|SSF52141|TIGR00628 Rmag_0684 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006139|IPR006140|IPR020921|IPR036291 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|Erythronate-4-phosphate dehydrogenase|NAD(P)-binding domain superfamily GO:0005737|GO:0008615|GO:0016616|GO:0033711|GO:0051287|GO:0055114 G3DSA:3.40.50.720|MF_01825|PF00389|PF02826|SSF51735|SSF52283 Rmag_0685 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006655|IPR006656|IPR006963 Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 G3DSA:2.20.25.90|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF04879|PS00490|SM00926|SSF53706 Rmag_0686 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000719|IPR001932|IPR008271|IPR011009|IPR036457 PPM-type phosphatase domain|PPM-type phosphatase domain superfamily|Protein kinase domain|Protein kinase-like domain superfamily|Serine/threonine-protein kinase, active site GO:0003824|GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.60.40.10|PF00069|PF13672|PS00108|SM00220|SM00331|SM00332|SSF56112|SSF81606 Rmag_0687 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011701|IPR036259 MFS transporter superfamily|Major facilitator superfamily GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 Rmag_0688 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005117|IPR006066|IPR006067|IPR007419|IPR012744|IPR016156|IPR017121|IPR023753|IPR036136|IPR036188 BFD-like [2Fe-2S]-binding domain|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|FAD/NAD-linked reductase, dimerisation domain superfamily|Nitrite reductase [NAD(P)H] large subunit, NirB|Nitrite reductase [NAD(P)H], large subunit|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/Sulfite reductase ferredoxin-like domain superfamily|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0008942|GO:0016491|GO:0020037|GO:0042128|GO:0050660|GO:0050661|GO:0051536|GO:0055114 G3DSA:1.10.10.1100|G3DSA:3.30.390.30|G3DSA:3.30.413.10|G3DSA:3.50.50.60|G3DSA:3.90.480.10|PF01077|PF03460|PF04324|PF07992|PIRSF037149|PR00368|PR00411|PS00365|SSF51905|SSF55124|SSF56014|TIGR02374 Rmag_0689 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003448|IPR036563 Molybdopterin biosynthesis MoaE|Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 G3DSA:3.90.1170.40|PF02391|SSF54690 Rmag_0690 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|SSF53448|TIGR02665 Rmag_0691 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001453|IPR005110|IPR005111|IPR008284|IPR036135|IPR036425|IPR036688 MoaB/Mog domain|MoaB/Mog-like domain superfamily|MoeA, C-terminal, domain IV|MoeA, C-terminal, domain IV superfamily|MoeA, N-terminal and linker domain|MoeA, N-terminal and linker domain superfamily|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 Rmag_0692 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002820|IPR023045|IPR036522 Molybdenum cofactor biosynthesis C|Molybdopterin cofactor biosynthesis C (MoaC) domain|Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|SSF55040|TIGR00581 Rmag_0693 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elp3/MiaB/NifB|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|SM00729|SSF102114|TIGR02666 Rmag_0694 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain superfamily|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|Sulfur carrier ThiS/MoaD-like G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01682 Rmag_0698 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001453|IPR008284|IPR036425 MoaB/Mog domain|MoaB/Mog-like domain superfamily|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PS01078|SM00852|SSF53218|TIGR00177 Rmag_0699 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002035|IPR036465 von Willebrand factor A-like domain superfamily|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|SM00327|SSF53300 Rmag_0700 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003593|IPR011704|IPR013615|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|CbbQ/NirQ/NorQ, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PF08406|SM00382|SSF52540 Rmag_0701 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000685|IPR017443|IPR020878|IPR036376|IPR036422 Ribulose bisphosphate carboxylase, large chain, active site|Ribulose bisphosphate carboxylase, large subunit, C-terminal|Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily|Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal|RuBisCO large subunit, N-terminal domain superfamily GO:0000287|GO:0015977|GO:0016984 G3DSA:3.20.20.110|G3DSA:3.30.70.150|PF00016|PF02788|PS00157|SSF51649|SSF54966 Rmag_0704 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002813|IPR016117 ArgJ-like domain superfamily|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.10.20.340|G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|SSF56266|TIGR00120 Rmag_0705 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000515|IPR035906 ABC transporter type 1, transmembrane domain MetI-like|MetI-like superfamily GO:0016020|GO:0055085 G3DSA:1.10.3720.10|PF00528|SSF161098 Rmag_0706 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850 Rmag_0707 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 Rmag_0708 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PS00080|SSF49503 Rmag_0711 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010538|IPR036909 Cytochrome c-like domain superfamily|Di-haem oxidoreductase, putative peroxidase GO:0009055|GO:0020037 PF06537|PIRSF028099|SSF46626 Rmag_0712 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR018976|IPR038352 Imelysin-like domain|Imelysin-like domain superfamily G3DSA:1.20.1420.20|PF09375 Rmag_0714 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002524|IPR027469|IPR027470|IPR036837 Cation efflux protein|Cation efflux protein, cytoplasmic domain|Cation efflux protein, cytoplasmic domain superfamily|Cation efflux transmembrane domain superfamily GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|SSF160240|SSF161111|TIGR01297 Rmag_0716 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005746|IPR013766|IPR017937|IPR036249 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like superfamily GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 Rmag_0717 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006504|IPR006660|IPR036249 Arsenate reductase-like|Thioredoxin-like superfamily|Transcriptional regulator Spx/MgsR G3DSA:3.40.30.10|PF03960|SSF52833|TIGR01617 Rmag_0719 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR019099 Uncharacterised protein family PGPGW, transmembrane PF09656 Rmag_0721 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 MF_00255|PF02092|PR01045|SSF109604|TIGR00211 Rmag_0722 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR020358|IPR024467 Domain of unknown function DUF2384|Uncharacterised protein family Y4oB PD080812|PF09722 Rmag_0723 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic G3DSA:3.30.1150.10|PF13103|SSF74653 Rmag_0724 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Tol-Pal system protein TolR GO:0015031|GO:0016021|GO:0022857|GO:0055085 G3DSA:3.30.420.270|MF_02203|PF02472|TIGR02801 Rmag_0725 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0016021|GO:0043213 PF01618|TIGR02796 Rmag_0729 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004565|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein LolB GO:0009279|GO:0015031 G3DSA:2.50.20.10|PF03550|SSF89392 Rmag_0730 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR018214|IPR036291|IPR036343|IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily|Glutamyl-tRNA reductase, N-terminal domain superfamily|Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain superfamily|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:3.30.460.30|G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|SSF51735|SSF69075|SSF69742|TIGR01035 Rmag_0731 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000352|IPR004373|IPR005139 Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:3.30.160.20|G3DSA:3.30.70.1660|MF_00093|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00019 Rmag_0732 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001626|IPR037294 ABC transporter, BtuC-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 G3DSA:1.10.3470.10|PF00950|SSF81345 Rmag_0733 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002481|IPR036388|IPR036390 Ferric-uptake regulator|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.1490.190|PF01475|SSF46785 Rmag_0734 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007450|IPR026592|IPR037873 BamE-like|Lipoprotein SmpA/OmlA|Outer membrane protein assembly factor BamE GO:0019867 G3DSA:3.30.1450.10|MF_00925|PF04355 Rmag_0735 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002142|IPR029045 ClpP/crotonase-like domain superfamily|Peptidase S49 GO:0006508|GO:0008233 G3DSA:3.40.1750.20|G3DSA:3.90.226.10|PF01343|SSF52096 Rmag_0736 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR005895|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0016887|GO:0017004 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01189 Rmag_0737 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003544|IPR026031 Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PIRSF002764|PR01414|TIGR01190 Rmag_0738 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|SSF55973|TIGR01034 Rmag_0739 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000043|IPR015878|IPR020082|IPR036291 Adenosylhomocysteinase-like|NAD(P)-binding domain superfamily|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|PF00670|PF05221|PIRSF001109|PS00739|SM00996|SM00997|SSF51735|SSF52283 Rmag_0740 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|SSF55681|TIGR00388 Rmag_0741 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR032816 SNARE associated Golgi protein PF09335 Rmag_0742 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006685|IPR010920|IPR011014|IPR011066|IPR023408 LSM domain superfamily|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS domain superfamily|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|SSF50182|SSF82689|SSF82861 Rmag_0743 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR038135 Elp3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, N-terminal domain superfamily|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0016740|GO:0051536|GO:0051539 G3DSA:3.40.50.12160|G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01574 Rmag_0744 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003782|IPR036249 Copper chaperone SCO1/SenC|Thioredoxin-like superfamily G3DSA:3.40.30.10|PF02630|SSF52833 Rmag_0745 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007410|IPR036182 Copper chaperone PCuAC|Copper chaperone PCuAC superfamily G3DSA:2.60.40.1890|PF04314|SSF110087 Rmag_0747 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|SSF52402|TIGR00420 Rmag_0748 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007451|IPR035932 HflD-like superfamily|High frequency lysogenization protein HflD G3DSA:1.10.3890.10|MF_00695|PD037115|PF04356|SSF101322 Rmag_0749 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002583|IPR036510 Ribosomal protein S20|Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029 Rmag_0750 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|TIGR00237 Rmag_0751 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.60.40.1590|G3DSA:2.70.70.10|PF01551|SSF51261 Rmag_0752 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010432 RDD PF06271 Rmag_0754 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007060 Septum formation initiator FtsL/DivIC PF04977 Rmag_0755 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001228|IPR018294|IPR029044|IPR034683 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Cytidylyltransferase IspD/TarI|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518|GO:0070567 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|SSF53448|TIGR00453 Rmag_0756 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003526|IPR020555|IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|PF02542|PS01350|SSF69765|TIGR00151 Rmag_0757 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Mur-like, catalytic domain superfamily|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01082 Rmag_0758 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003170|IPR006094|IPR011601|IPR016167|IPR016169|IPR036318|IPR036635 FAD linked oxidase, N-terminal|FAD-binding, type PCMH, subdomain 1|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|SSF56176|SSF56194|TIGR00179 Rmag_0759 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain superfamily GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00844|SSF52440|SSF56059|TIGR01205 Rmag_0760 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005548|IPR013685 Cell division protein FtsQ/DivIB|POTRA domain, FtsQ-type G3DSA:3.10.20.310|G3DSA:3.40.50.11690|PF03799|PF08478 Rmag_0762 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000189|IPR008258|IPR018392|IPR023346|IPR036779 LysM domain|LysM domain superfamily|Lysozyme-like domain superfamily|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|SM00257|SSF53955|SSF54106 Rmag_0763 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002634|IPR036065 BolA protein|BolA-like superfamily G3DSA:3.10.20.90|PF01722|PIRSF003113|SSF82657 Rmag_0764 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001041|IPR001221|IPR001433|IPR008333|IPR012675|IPR017938|IPR036010|IPR039261 2Fe-2S ferredoxin-like superfamily|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain superfamily|Ferredoxin-NADP reductase (FNR), nucleotide-binding domain|Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain|Oxidoreductase FAD/NAD(P)-binding|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00410|SSF52343|SSF54292|SSF63380 Rmag_0765 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR018022|IPR027417 IPP transferase|P-loop containing nucleoside triphosphate hydrolase GO:0008033 G3DSA:1.10.20.140|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 Rmag_0766 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004101|IPR005762|IPR013221|IPR036565|IPR036615 Mur ligase, C-terminal|Mur ligase, C-terminal domain superfamily|Mur ligase, central|Mur-like, catalytic domain superfamily|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01087 Rmag_0767 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006214 Bax inhibitor 1-related PF01027 Rmag_0768 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000086|IPR015797|IPR020084|IPR022927 NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|PS00893|SSF55811 Rmag_0769 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001342|IPR002912|IPR005106|IPR016204|IPR019811|IPR036291 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain superfamily GO:0004412|GO:0006520|GO:0016491|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|SSF51735|SSF55021|SSF55347 Rmag_0770 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000634|IPR001926|IPR004450|IPR026260|IPR036052 Pyridoxal-phosphate dependent enzyme|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase, bacterial/archaeal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004795|GO:0006520|GO:0009088|GO:0030170 G3DSA:3.40.50.1100|PF00291|PIRSF038945|PS00165|SSF53686|TIGR00260 Rmag_0771 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 PF13304|SSF52540 Rmag_0772 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001216|IPR001926|IPR005856|IPR005858|IPR036052 Cysteine synthase|Cysteine synthase CysM|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686|TIGR01136|TIGR01138 Rmag_0773 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|SSF81340 Rmag_0774 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005265 Uncharacterised protein family UPF0093 PF03653|PIRSF004638 Rmag_0776 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009288|IPR036568 Gamma-glutamyl cyclotransferase-like superfamily|Gamma-glutamylcyclotransferase, AIG2-like G3DSA:3.10.490.10|PF06094|SSF110857 Rmag_0777 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|SSF63411 Rmag_0778 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001431|IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 Rmag_0781 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417|IPR036225 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|SRP/SRP receptor, N-terminal|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 Rmag_0783 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000860|IPR022417|IPR022418|IPR022419|IPR036803 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, C-terminal domain superfamily|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|SSF53850|SSF54782|TIGR00212 Rmag_0784 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|SSF48557|TIGR00838 Rmag_0785 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002376|IPR005793|IPR005794|IPR011034|IPR036477|IPR037022 Formyl transferase, C-terminal|Formyl transferase, C-terminal domain superfamily|Formyl transferase, N-terminal|Formyl transferase, N-terminal domain superfamily|Formyl transferase-like, C-terminal domain superfamily|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|SSF50486|SSF53328|TIGR00460 Rmag_0786 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|SSF75217 Rmag_0787 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299|IPR036628 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|Clp, N-terminal domain superfamily|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0019538|GO:0042026 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 Rmag_0788 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003667|IPR010968 Ion-translocating oxidoreductase complex subunit E|NqrDE/RnfAE GO:0016020|GO:0022900 MF_00478|PF02508|PIRSF006102|TIGR01948 Rmag_0790 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002052|IPR004556|IPR007848|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|PF05175|PS00092|SSF53335|TIGR00536|TIGR03534 Rmag_0793 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004646|IPR004647|IPR011167|IPR036660 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily|Iron-dependent fumarate hydratase GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|SSF117457|TIGR00722|TIGR00723 Rmag_0794 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004753 Cell shape determining protein MreB GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|SSF53067|TIGR00904 Rmag_0795 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 G3DSA:2.40.10.340|G3DSA:2.40.10.350|PF04085|PIRSF038471|TIGR00219 Rmag_0796 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PF04093|TIGR03426 Rmag_0797 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001460|IPR005311|IPR012338|IPR017790|IPR036138 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, dimerisation domain superfamily|Penicillin-binding protein, transpeptidase GO:0008658|GO:0009002|GO:0009252|GO:0016020 G3DSA:3.30.1390.30|G3DSA:3.40.710.10|G3DSA:3.90.1310.10|MF_02081|PF00905|PF03717|SSF56519|SSF56601|TIGR03423 Rmag_0799 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417|IPR036640 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter type 1, transmembrane domain superfamily|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 Rmag_0800 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016192|IPR016193|IPR024072 APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Dihydrofolate reductase-like domain superfamily|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|SSF53597|SSF53927|TIGR00227|TIGR00326 Rmag_0801 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003382|IPR005252|IPR007085|IPR035929|IPR036551 CoaB-like superfamily|Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavin prenyltransferase-like|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|SSF102645|SSF52507|TIGR00521 Rmag_0803 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003824|GO:0006260|GO:0008408 G3DSA:1.10.10.1600|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 Rmag_0805 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR025710|IPR036909 Cytochrome c-like domain superfamily|SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 G3DSA:1.10.760.10|PIRSF038455|SSF46626|TIGR04484 Rmag_0806 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013783|IPR014756|IPR014880|IPR030995 Immunoglobulin E-set|Immunoglobulin-like fold|Sulphur oxidation protein SoxZ|Thiosulfate oxidation carrier complex protein SoxZ G3DSA:2.60.40.10|PF08770|SSF81296|TIGR04490 Rmag_0807 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR016568|IPR032711|IPR038162 Ig-like SoxY domain|Ig-like SoxY domain superfamily|Sulphur oxidation, SoxY G3DSA:2.60.40.2470|PF13501|PIRSF010312|TIGR04488 Rmag_0808 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009056|IPR030999|IPR036909 Cytochrome c-like domain|Cytochrome c-like domain superfamily|Sulfur oxidation c-type cytochrome SoxX GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626|TIGR04485 Rmag_0809 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|SSF56322|TIGR00564 Rmag_0810 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754|IPR038120 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase Rpb1, funnel domain superfamily|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:1.10.132.30|G3DSA:1.10.150.390|G3DSA:1.10.1790.20|G3DSA:1.10.274.100|G3DSA:1.10.40.90|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|SM00663|SSF64484|TIGR02386 Rmag_0811 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR019462|IPR037033|IPR037034 DNA-directed RNA polymerase beta subunit, bacterial-type|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2, hybrid-binding domain|DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 2 superfamily|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|G3DSA:3.90.1800.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|SSF64484|TIGR02013 Rmag_0812 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000206|IPR008932|IPR013823|IPR014719|IPR036235 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation|Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 Rmag_0813 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001790|IPR022973 Ribosomal protein L10|Ribosomal protein L10P GO:0005622|GO:0042254 G3DSA:3.30.70.1730|MF_00362|PF00466|SSF160369 Rmag_0814 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002143|IPR005878|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|SSF56808|TIGR01169 Rmag_0815 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR036769|IPR036796 Ribosomal protein L11, C-terminal|Ribosomal protein L11, C-terminal domain superfamily|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11/L12|Ribosomal protein L11/L12, N-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|SM00649|SSF46906|SSF54747|TIGR01632 Rmag_0816 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001062|IPR006645|IPR008991|IPR014722|IPR036735 NusG, N-terminal|NusG, N-terminal domain superfamily|Ribosomal protein L2, domain 2|Transcription antitermination protein, NusG|Translation protein SH3-like domain superfamily GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF02357|PR00338|SM00738|SSF50104|SSF82679|TIGR00922 Rmag_0817 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001901|IPR005807|IPR038379 Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex, bacterial-like|SecE superfamily GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PR01650|TIGR00964 Rmag_0818 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain superfamily GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 Rmag_0819 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001891|IPR012301|IPR012302|IPR015884|IPR036291|IPR037062 Malic enzyme, N-terminal domain|Malic enzyme, N-terminal domain superfamily|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic oxidoreductase|NAD(P)-binding domain superfamily GO:0004470|GO:0004471|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|PF00390|PF03949|PIRSF000106|PS00331|SM00919|SM01274|SSF51735|SSF53223 Rmag_0821 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003437|IPR015421|IPR015422|IPR015424|IPR020581 Glycine cleavage system P protein|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00711|PF02347|SSF53383|TIGR00461 Rmag_0822 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001310|IPR036265 HIT-like superfamily|Histidine triad (HIT) protein G3DSA:3.30.428.10|PF01230|PR00332|SSF54197 Rmag_0824 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily GO:0016491|GO:0055114 G3DSA:3.50.50.100|PF07992|SSF51905 Rmag_0825 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 Rmag_0826 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001279|IPR036866 Metallo-beta-lactamase|Ribonuclease Z/Hydroxyacylglutathione hydrolase-like G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 Rmag_0828 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000846|IPR022663|IPR022664|IPR023940|IPR036291 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain superfamily GO:0008839|GO:0009089|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|SSF51735|SSF55347|TIGR00036 Rmag_0831 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|SSF51569|TIGR01362 Rmag_0832 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568 G3DSA:3.20.20.70|MF_00134_B|PF00218|PS00614|SSF51366 Rmag_0833 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003718|IPR015946|IPR036102 K homology domain-like, alpha/beta|OsmC/Ohr family|OsmC/Ohr superfamily G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784 Rmag_0834 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR008867|IPR013785|IPR033983 Aldolase-type TIM barrel|Thiazole synthase|Thiazole synthase ThiG GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|SSF110399 Rmag_0835 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 Rmag_0836 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 Rmag_0837 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000031|IPR024694|IPR033747|IPR035893 Class I PurE|PurE domain|PurE domain superfamily|PurE, prokaryotic type GO:0006189 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|SM01001|SSF52255|TIGR01162 Rmag_0838 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|SSF51246|SSF52440|SSF56059|TIGR01161 Rmag_0839 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002109|IPR011767|IPR036249 Glutaredoxin|Glutaredoxin active site|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PS00195|SSF52833 Rmag_0840 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000672|IPR020630|IPR020631|IPR020867|IPR036291 NAD(P)-binding domain superfamily|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|SSF51735|SSF53223 Rmag_0841 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|SSF53448|TIGR00466 Rmag_0842 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005651|IPR038053 Trm112-like|Uncharacterised protein family UPF0434 G3DSA:2.20.25.10|MF_01187|PF03966|SSF158997 Rmag_0843 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 MF_00409|PF02606|SSF52540|TIGR00682 Rmag_0844 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|TIGR02212 Rmag_0845 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 Rmag_0846 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain superfamily GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|SSF50692|TIGR00223 Rmag_0847 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 PF03977|PIRSF015658|TIGR01109 Rmag_0848 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000089|IPR000891|IPR001882|IPR003379|IPR005776|IPR011053|IPR013785 Aldolase-type TIM barrel|Biotin-binding site|Biotin/lipoyl attachment|Carboxylase, conserved domain|Oxaloacetate decarboxylase, alpha subunit|Pyruvate carboxyltransferase|Single hybrid motif GO:0003824|GO:0006814|GO:0008948 G3DSA:2.40.50.100|G3DSA:3.20.20.70|PF00364|PF00682|PF02436|PS00188|SSF51230|SSF51569|SSF89000|TIGR01108 Rmag_0849 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 PF04277|TIGR01195 Rmag_0850 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SM00316|SSF50249|TIGR00008 Rmag_0851 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|SSF51730|TIGR00676 Rmag_0853 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003754|IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase|Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 Rmag_0855 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 G3DSA:1.20.1420.30|G3DSA:1.20.58.1130|PF01699|TIGR00367 Rmag_0856 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|SSF52540|TIGR00150 Rmag_0858 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004484|IPR011698|IPR027417|IPR029062|IPR035903 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|Cobyrinic acid a,c-diamide synthase CbiA|HesB-like domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:2.60.300.12|G3DSA:3.40.50.300|G3DSA:3.40.50.880|PF07685|PF13500|SSF52317|SSF52540|SSF89360|TIGR00379 Rmag_0859 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005614 NrfD family PF03916 Rmag_0860 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|SSF54862 Rmag_0861 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR036280 Multiheme cytochrome superfamily G3DSA:3.90.10.10|SSF48695 Rmag_0862 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR009051|IPR017896|IPR017900|IPR023753|IPR028261|IPR036188 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.30.70.20|G3DSA:3.50.50.60|PF07992|PF12838|PF14691|PR00419|PS00198|SSF46548|SSF51971|SSF54862 Rmag_0863 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004017|IPR009051|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain GO:0051536 PF02754|PF13183|PS00198|SSF46548 Rmag_0864 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023234|IPR036197 NarG-like domain|NarG-like superfamily G3DSA:1.20.950.20|PF02665|SSF103501 Rmag_0865 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007453|IPR025526 DsrC-like domain superfamily|Sulphur transfer protein DsrC/TusE G3DSA:1.10.10.370|G3DSA:3.30.1420.10|PF04358|PIRSF006223|SSF69721|TIGR03342 Rmag_0866 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007215|IPR027396 DsrEFH-like|Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 G3DSA:3.40.1260.10|PF04077|SSF75169|TIGR03011 Rmag_0867 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003787|IPR017462|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusC/DsrF G3DSA:3.40.1260.10|PF02635|SSF75169|TIGR03010 Rmag_0868 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003787|IPR017463|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 G3DSA:3.40.1260.10|PF02635|SSF75169|TIGR03012 Rmag_0869 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005117|IPR006067|IPR011808|IPR017900|IPR036136 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/Sulfite reductase ferredoxin-like domain superfamily|Nitrite/sulphite reductase 4Fe-4S domain|Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0016491|GO:0018551|GO:0020037|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.30.70.20|G3DSA:3.30.70.3340|PF01077|PF03460|PS00198|SSF54862|SSF55124|SSF56014|TIGR02066 Rmag_0870 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006067|IPR011806|IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily|Nitrite/sulphite reductase 4Fe-4S domain|Sulphite reductase, dissimilatory-type alpha subunit GO:0016491|GO:0018551|GO:0020037|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.30.70.20|G3DSA:3.30.70.2500|PF01077|SSF54862|SSF55124|SSF56014|TIGR02064 Rmag_0871 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006005|IPR009051|IPR023753|IPR028261|IPR036188 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|SSF46548|SSF51971|TIGR01317 Rmag_0872 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001857|IPR008991|IPR018257|IPR038657 Ribosomal protein L19|Ribosomal protein L19 superfamily|Ribosomal protein L19, conserved site|Translation protein SH3-like domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.790|MF_00402|PF01245|PIRSF002191|PR00061|PS01015|SSF50104|TIGR01024 Rmag_0874 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624|IPR036805|IPR036953 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor GreA/GreB, C-terminal domain superfamily|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, N-terminal domain superfamily|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|SSF46557|SSF54534|TIGR01462 Rmag_0875 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR016185|IPR036897|IPR036914 Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily|Methylglyoxal synthase-like domain|Methylglyoxal synthase-like domain superfamily|Pre-ATP-grasp domain superfamily GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 Rmag_0876 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805 Rmag_0877 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002474|IPR006274|IPR017926|IPR029062|IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain|Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily|Carbamoyl-phosphate synthase, small subunit|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|SM01097|SSF52021|SSF52317|TIGR01368 Rmag_0878 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006121|IPR017969|IPR036163 Heavy metal-associated domain superfamily|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PS01047|SSF55008 Rmag_0879 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain superfamily|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|Sulfur carrier ThiS/MoaD-like|ThiS, thiamine-biosynthesis G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01683 Rmag_0880 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014729|IPR020536 Rossmann-like alpha/beta/alpha sandwich fold|Thil, AANH domain GO:0004810 G3DSA:3.40.50.620|PF02568|SSF52402 Rmag_0881 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007453|IPR025526 DsrC-like domain superfamily|Sulphur transfer protein DsrC/TusE G3DSA:1.10.10.370|PF04358|PIRSF006223|SSF69721|TIGR03342 Rmag_0882 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily|Translation protein, beta-barrel domain superfamily GO:0000166|GO:0003676|GO:0004812|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0043039 G3DSA:2.40.30.130|G3DSA:3.10.310.40|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 Rmag_0883 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0097367|GO:1901135|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 Rmag_0884 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001672|IPR018189 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|SSF53697 Rmag_0885 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01099 Rmag_0886 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003869|IPR029063|IPR036291 NAD(P)-binding domain superfamily|Polysaccharide biosynthesis protein, CapD-like domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.720|PF02719|PF13727|SSF51735|SSF53335 Rmag_0887 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003362 Bacterial sugar transferase PF02397 Rmag_0889 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 Rmag_0890 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 Rmag_0891 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 Rmag_0892 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007074 LicD family PF04991 Rmag_0893 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004821|IPR014729 Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058 G3DSA:3.40.50.620|PF01467|SSF52374|TIGR00125 Rmag_0894 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 Rmag_0896 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013691|IPR029063 C-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|G3DSA:3.40.50.720|PF08484|PF13489|SSF53335 Rmag_0897 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011009|IPR029044 Nucleotide-diphospho-sugar transferases|Protein kinase-like domain superfamily G3DSA:3.90.550.10|SSF53448|SSF56112 Rmag_0898 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001538|IPR011051|IPR014710 Mannose-6-phosphate isomerase, type II, C-terminal|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold GO:0005976|GO:0016779 G3DSA:2.60.120.10|PF01050|SSF51182 Rmag_0899 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013785 Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|SSF51569 Rmag_0900 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023214|IPR036412 HAD superfamily|HAD-like superfamily G3DSA:3.40.50.1000|PF08282|SSF56784 Rmag_0901 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 Rmag_0902 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001509|IPR028614|IPR036291 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain superfamily|NAD-dependent epimerase/dehydratase GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|SSF51735 Rmag_0903 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006368|IPR016040|IPR036291 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain|NAD(P)-binding domain superfamily GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|SSF51735|TIGR01472 Rmag_0904 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain superfamily|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|SSF51182|SSF53448|TIGR01479 Rmag_0905 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 Rmag_0907 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002654 Glycosyl transferase, family 25 PF01755 Rmag_0908 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007016 O-antigen ligase-related PF04932 Rmag_0909 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, alpha-bundle domain superfamily|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, N-terminal|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|PF00749|PF03950|PR00987|PS00178|SSF50715|SSF52374|TIGR00440 Rmag_0910 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002828|IPR030048|IPR036523 SurE-like phosphatase/nucleotidase superfamily|Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|SSF64167|TIGR00087 Rmag_0911 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299|IPR036628 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|Clp, N-terminal domain superfamily|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0019538|GO:0043335 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 Rmag_0912 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736 Rmag_0913 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04408 Rmag_0914 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, glutamine amidotransferase|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 Rmag_0915 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|SSF53927 Rmag_0916 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002347|IPR011284|IPR020904|IPR036291 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain superfamily|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01830 Rmag_0917 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain superfamily|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0004314|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|SM00827|SSF52151|SSF55048|TIGR00128 Rmag_0918 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.1030|MF_00539|PD003114|PF01016|PR00063|PS00831|SSF110324|TIGR00062 Rmag_0919 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001787|IPR018258|IPR028909|IPR036164 L21-like superfamily|Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|SSF141091|TIGR00061 Rmag_0920 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain superfamily|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|SSF50891 Rmag_0921 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 MF_00575|SSF56300|TIGR01854 Rmag_0922 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001900|IPR012340|IPR036388 Nucleic acid-binding, OB-fold|Ribonuclease II/R|Winged helix-like DNA-binding domain superfamily GO:0003723|GO:0004540 G3DSA:1.10.10.10|PF00773|SM00955|SSF50249 Rmag_0923 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002930|IPR011053|IPR017453|IPR033753 Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Glycine cleavage system H-protein/Simiate|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|SSF51230|TIGR00527 Rmag_0924 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006222|IPR006223|IPR013977|IPR022903|IPR027266|IPR028896|IPR029043 Aminomethyltransferase, folate-binding domain|Aminomethyltransferase-like|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein/YgfZ, C-terminal|Glycine cleavage system T protein|Glycine cleavage system T protein, bacteria GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|G3DSA:4.10.1250.10|MF_00259|PF01571|PF08669|PIRSF006487|SSF101790|SSF103025|TIGR00528 Rmag_0925 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279 Rmag_0927 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006056|IPR006175|IPR035959 RidA family|RutC-like superfamily|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298|TIGR00004 Rmag_0928 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001650|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0005524 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|SM00487|SM00490|SSF50249|SSF52540 Rmag_0929 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007440|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily|Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 G3DSA:3.40.1410.10|MF_01632|PF04345|SSF64288 Rmag_0930 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005271|IPR025714|IPR029063 Carboxy-S-adenosyl-L-methionine synthase|Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0002098 G3DSA:3.40.50.150|MF_01589|PF13847|PIRSF006325|SSF53335|TIGR00740 Rmag_0931 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PR00096|PR00097|SSF52317|TIGR00566 Rmag_0932 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001763|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 Rmag_0933 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002109|IPR014025|IPR036249 Glutaredoxin|Glutaredoxin subgroup|Thioredoxin-like superfamily GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|SSF52833 Rmag_0934 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR036291 6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain superfamily GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|SSF48179|SSF51735 Rmag_0935 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|SSF54211 Rmag_0936 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005822|IPR005823|IPR023563|IPR036899 Ribosomal protein L13|Ribosomal protein L13 superfamily|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PS00783|SSF52161|TIGR01066 Rmag_0937 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000917|IPR012549|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|Phosphoethanolamine transferase, N-terminal|Sulfatase, N-terminal GO:0003824|GO:0008484|GO:0016021 G3DSA:3.40.720.10|PF00884|PF08019|SSF53649 Rmag_0939 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000866|IPR036249 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like superfamily GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 Rmag_0942 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR012677|IPR014001|IPR027417|IPR028618 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase DeaD|DEAD box helicase DbpA/CsdA, RNA-binding domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleotide-binding alpha-beta plait domain superfamily|P-loop containing nucleoside triphosphate hydrolase GO:0000027|GO:0003676|GO:0004004|GO:0005524|GO:0070417 G3DSA:3.30.70.330|G3DSA:3.40.50.300|MF_00964|PF00270|PF00271|PF03880|PS00039|SM00487|SM00490|SSF52540 Rmag_0944 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock domain|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 Rmag_0946 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR012337|IPR013520|IPR013620|IPR023607|IPR036397|IPR038649 Exodeoxyribonuclease I|Exodeoxyribonuclease I, C-terminal|Exonuclease I, SH3-like domain superfamily|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H superfamily|Ribonuclease H-like superfamily GO:0003676|GO:0004529|GO:0006281|GO:0008852 G3DSA:1.20.1280.70|G3DSA:2.30.30.450|G3DSA:3.30.420.10|PF00929|PF08411|PIRSF000977|SM00479|SSF53098 Rmag_0947 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PIRSF001435|PS00764|PS01155|SM00478|SM00525|SSF48150|TIGR01083 Rmag_0948 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR011009|IPR016477 Fructosamine/Ketosamine-3-kinase|Protein kinase-like domain superfamily G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF03881|PIRSF006221|SSF56112 Rmag_0949 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|SSF52317|TIGR01855 Rmag_0950 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000807|IPR020565|IPR020568|IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily|Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|SSF54211 Rmag_0951 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR036291 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain superfamily|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|SM00859|SSF51735|SSF55347|TIGR01296 Rmag_0952 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002678|IPR036069 GTP cyclohydrolase 1 type 2/Nif3|GTP cyclohydrolase 1 type 2/Nif3 superfamily G3DSA:3.40.1390.30|PF01784|SSF102705|TIGR00486 Rmag_0953 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|SSF53383|TIGR01141 Rmag_0954 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like G3DSA:3.40.1190.20|PF08543|SSF53613 Rmag_0955 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001853|IPR023205|IPR036249 DSBA-like thioredoxin domain|Thiol:disulphide interchange protein DsbA/DsbL|Thioredoxin-like superfamily GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF001488|SSF52833 Rmag_0956 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000550|IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily|7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|SSF55083|TIGR01498 Rmag_0957 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|SM00905|SSF55620|TIGR00525|TIGR00526 Rmag_0958 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|SM01207|TIGR00023 Rmag_0960 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0016020|GO:0016021|GO:0043190|GO:0055085 PF01061|PIRSF006648|PR00164 Rmag_0961 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 Rmag_0962 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR011053|IPR023213|IPR036625 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain superfamily|E3-binding domain superfamily|Peripheral subunit-binding domain|Single hybrid motif GO:0016746 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777 Rmag_0963 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001100|IPR004099|IPR006258|IPR012999|IPR016156|IPR023753|IPR036188 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily|FAD/NAD-linked reductase, dimerisation domain superfamily|Pyridine nucleotide-disulphide oxidoreductase, class I|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0009055|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01350 Rmag_0964 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01135|SSF53335 Rmag_0965 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004869 Membrane transport protein MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|SSF82866 Rmag_0966 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003953|IPR005288|IPR015939|IPR027477|IPR036188|IPR037099 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain superfamily|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PIRSF000171|PR00368|SSF46977|SSF51905|SSF56425|TIGR00551 Rmag_0967 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023635|IPR036821 Peptide deformylase|Peptide deformylase superfamily G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 Rmag_0968 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002197|IPR005412|IPR009057 DNA binding HTH domain, Fis-type|DNA-binding protein Fis|Homeobox-like domain superfamily GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF02954|PIRSF002097|SSF46689 Rmag_0969 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002695|IPR011607|IPR016193|IPR024051|IPR036914 AICAR transformylase, duplicated domain superfamily|Bifunctional purine biosynthesis protein PurH-like|Cytidine deaminase-like|Methylglyoxal synthase-like domain|Methylglyoxal synthase-like domain superfamily GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 Rmag_0971 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002698|IPR024185|IPR037171 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain superfamily|NagB/RpiA transferase-like G3DSA:3.40.50.10420|PF01812|PIRSF006806|SSF100950|TIGR02727 Rmag_0972 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002938|IPR010971|IPR018168|IPR036188 FAD-binding domain|FAD/NAD(P)-binding domain superfamily|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.50|G3DSA:3.50.50.60|PF01494|PR00420|PS01304|SSF51905|TIGR01988 Rmag_0973 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002510|IPR035068|IPR036059 Metalloprotease TldD/PmbA|Metalloprotease TldD/PmbA superfamily|Metalloprotease TldD/PmbA, N-terminal GO:0006508|GO:0008237 G3DSA:3.30.2290.10|PF01523|SSF111283 Rmag_0974 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR039447 Urease accessory protein UreH-like, transmembrane domain PF13386 Rmag_0975 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000644|IPR005170|IPR016169|IPR036318 CBS domain|FAD-binding, type PCMH, subdomain 2|FAD-binding, type PCMH-like superfamily|Transporter-associated domain GO:0050660 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|SM00116|SM01091|SSF54631|SSF56176 Rmag_0976 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005346|IPR016155|IPR037021 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|RnfH protein|RnfH superfamily G3DSA:3.10.20.280|MF_00460|PF03658|SSF54285 Rmag_0977 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949 G3DSA:3.20.20.70|MF_01014|PF00977|SSF51366|TIGR00007 Rmag_0978 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 Rmag_0980 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|SSF53067|TIGR00329|TIGR03723 Rmag_0981 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR04406 Rmag_0982 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004143|IPR004408 Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF03099|SSF55681|TIGR00121 Rmag_0983 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000829|IPR036945 DAGK family|Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0008654|GO:0016020|GO:0016301 G3DSA:1.10.3830.10|PF01219|PS01069 Rmag_0984 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001406|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|SSF55120|TIGR00071 Rmag_0985 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002629|IPR006276|IPR013215|IPR038071 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal|UROD/MetE-like superfamily GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|SSF51726|TIGR01371 Rmag_0986 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000847|IPR005119|IPR036388|IPR036390 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix DNA-binding domain superfamily|Winged helix-like DNA-binding domain superfamily GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 Rmag_0987 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004680|IPR006037|IPR036721 Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, C-terminal domain superfamily GO:0006813|GO:0008324|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF02080|PF03600|SSF116726 Rmag_0988 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001765|IPR036874 Carbonic anhydrase|Carbonic anhydrase superfamily GO:0004089|GO:0008270 G3DSA:3.40.1050.10|PF00484|SM00947|SSF53056 Rmag_0989 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002676|IPR009000|IPR011033|IPR011961|IPR027275|IPR036976 16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like superfamily|RimM, N-terminal|RimM, N-terminal domain superfamily|Translation protein, beta-barrel domain superfamily GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|SSF50346|SSF50447|TIGR02273 Rmag_0990 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain superfamily|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|SSF54565|TIGR00002 Rmag_0991 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|SSF48557|TIGR00928 Rmag_0992 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001030|IPR004406|IPR015928|IPR015929|IPR015931|IPR015932|IPR015933|IPR018136|IPR036008|IPR036288 Aconitase B|Aconitase B, HEAT-like domain|Aconitase B, HEAT-like domain superfamily|Aconitase B, swivel|Aconitase family, 4Fe-4S cluster binding site|Aconitase, domain 2|Aconitase, iron-sulfur domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003994|GO:0005829|GO:0006099|GO:0051539 G3DSA:1.25.40.310|G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF06434|PF11791|PIRSF036687|PS00450|SSF52016|SSF53732|SSF74778|TIGR00117 Rmag_0993 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001705|IPR011332|IPR018264|IPR038584 Ribosomal protein L33|Ribosomal protein L33 superfamily|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.20.28.120|MF_00294|PF00471|PS00582|SSF57829|TIGR01023 Rmag_0994 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001383|IPR026569|IPR034704|IPR037147 L28p-like|Ribosomal protein L28|Ribosomal protein L28/L24|Ribosomal protein L28/L24 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009 Rmag_0995 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|SSF53271|TIGR00336 Rmag_0996 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004808|IPR005135|IPR020847|IPR036691 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase|Endonuclease/exonuclease/phosphatase superfamily GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|SSF56219|TIGR00195|TIGR00633 Rmag_0997 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF02390|SSF53335 Rmag_0998 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PF04186 Rmag_0999 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001645|IPR013221|IPR036565|IPR036615 Folylpolyglutamate synthetase|Mur ligase, C-terminal domain superfamily|Mur ligase, central|Mur-like, catalytic domain superfamily GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|SSF53244|SSF53623|TIGR01499 Rmag_1000 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 Rmag_1001 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000836|IPR005854|IPR029055|IPR029057 Amidophosphoribosyltransferase|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13522|PIRSF000485|SSF53271|SSF56235|TIGR01134 Rmag_1002 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000277|IPR006234|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-succinylhomoserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase domain 1|Pyridoxal phosphate-dependent transferase, major domain GO:0003824|GO:0030170|GO:0071268 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_02056|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01325 Rmag_1003 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010083|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain superfamily GO:0005737|GO:0006633|GO:0008693 G3DSA:3.10.129.10|PF07977|SSF54637|TIGR01749 Rmag_1004 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|SM00825|SSF53901 Rmag_1005 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|SSF82866|TIGR00916|TIGR00966 Rmag_1006 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005791|IPR022645|IPR022646|IPR022813|IPR027398 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|SecD export protein N-terminal TM domain GO:0006886|GO:0015450 G3DSA:1.20.1640.10|G3DSA:3.30.1360.200|G3DSA:3.30.70.260|G3DSA:3.30.70.3400|MF_01463_B|PF02355|PF07549|PF13721|SSF82866|TIGR00916|TIGR01129 Rmag_1007 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|SM01323|TIGR00739 Rmag_1008 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|SSF46589|SSF55681|TIGR00414 Rmag_1009 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001763|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 Rmag_1011 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001763|IPR036873 Rhodanese-like domain|Rhodanese-like domain superfamily G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 Rmag_1012 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000792|IPR001789|IPR011006|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal GO:0000160|GO:0003677|GO:0006355 G3DSA:3.40.50.12740|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 Rmag_1013 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003018|IPR003594|IPR011712|IPR016380|IPR029016|IPR036890 GAF domain|GAF-like domain superfamily|Histidine kinase/HSP90-like ATPase|Histidine kinase/HSP90-like ATPase superfamily|Signal transduction histidine kinase, nitrate/nitrite-sensing|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0016021|GO:0046983 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF07730|PF13185|PIRSF003167|SM00387|SSF55781|SSF55874 Rmag_1014 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|SSF116878|SSF52540|TIGR00231|TIGR00450 Rmag_1015 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR006334|IPR007370|IPR014746 Glutamate--cysteine ligase|Glutamate--cysteine ligase, monofunctional|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004357|GO:0006750 G3DSA:3.30.590.20|MF_00578|PF04262|SSF55931|TIGR01434 Rmag_1016 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000086|IPR003561|IPR013785|IPR015797|IPR020084|IPR020476|IPR022998|IPR036206 Aldolase-type TIM barrel|Mutator MutT|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase, conserved site|NUDIX hydrolase-like domain superfamily|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase/TenI GO:0003824|GO:0006281|GO:0008413|GO:0016787 G3DSA:3.20.20.70|G3DSA:3.90.79.10|PF00293|PF02581|PR00502|PS00893|SSF51391|SSF55811|TIGR00586 Rmag_1018 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055|IPR036485 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, alpha subunit, C-terminal domain superfamily|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|SSF51395|SSF56235|SSF69336 Rmag_1019 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain superfamily GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|SSF53597 Rmag_1020 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0047429 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 Rmag_1021 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417|IPR036101|IPR037235 CarD-like/TRCF domain|CarD-like/TRCF domain superfamily|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|TRCF-like, C-terminal domain|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:2.30.30.840|G3DSA:3.30.2060.10|G3DSA:3.40.50.11140|G3DSA:3.40.50.11180|G3DSA:3.40.50.300|G3DSA:3.90.1150.50|MF_00969|PF00270|PF00271|PF02559|PF03461|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 Rmag_1022 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00583|SSF53613 Rmag_1023 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 G3DSA:3.40.1010.20|G3DSA:3.40.50.11270|MF_00191|PF02401|TIGR00216 Rmag_1024 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000438|IPR029045|IPR034733 Acetyl-CoA carboxylase|Acetyl-CoA carboxylase carboxyl transferase, beta subunit|ClpP/crotonase-like domain superfamily GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|SSF52096|TIGR00515 Rmag_1025 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|SSF51366|TIGR00262 Rmag_1026 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000257|IPR006361|IPR038071 UROD/MetE-like superfamily|Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|SSF51726|TIGR01464 Rmag_1027 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002150|IPR027491|IPR034704 L28p-like|Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.50|MF_00501|PF01197|PR01249|PS01143|SSF143800|TIGR00105 Rmag_1028 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001757|IPR008250|IPR018303|IPR021993|IPR023214|IPR023298|IPR023299|IPR027256|IPR036163|IPR036412 HAD superfamily|HAD-like superfamily|Heavy metal-associated domain superfamily|P-type ATPase|P-type ATPase, A domain superfamily|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|P-type ATPase, transmembrane domain superfamily|Putative metal-binding domain of cation transport ATPase GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.20|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PF12156|PR00119|PR00120|PS00154|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 Rmag_1030 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001451|IPR005882|IPR011004|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like superfamily GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|SSF51161|SSF53448|TIGR01173 Rmag_1031 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001926|IPR006653|IPR006654|IPR023026|IPR036052 Pyridoxal-phosphate dependent enzyme|Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|SSF53686|TIGR00263 Rmag_1032 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568 G3DSA:3.20.20.70|MF_00135|PF00697|SSF51366 Rmag_1034 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR023405|IPR025589|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|TOPRIM domain|Topoisomerase C-terminal repeat GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:3.40.50.140|MF_00952|PF01131|PF01751|PF13368|PR00417|SM00436|SM00437|SM00493|SSF56712|TIGR01051 Rmag_1035 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR007456 Smg MF_00598|PF04361 Rmag_1037 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|TIGR01030 Rmag_1038 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000100|IPR014721|IPR020568 Ribonuclease P|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|PD003629|PF00825|SSF54211|TIGR00188 Rmag_1039 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 Rmag_1040 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001708|IPR019998|IPR028053|IPR028055|IPR038210|IPR038221 Membrane insertase YidC/ALB3/OXA1/COX18|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC, periplasmic domain|Membrane insertase YidC/Oxa1, C-terminal|YidC, periplasmic domain superfamily GO:0016021|GO:0032977 G3DSA:2.70.98.90|MF_01810|PF02096|PF14849|PR00701|PR01900|TIGR03592|TIGR03593 Rmag_1041 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 Rmag_1042 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002502|IPR036505 N-acetylmuramoyl-L-alanine amidase domain|N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SM00644|SSF55846 Rmag_1043 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR010023|IPR023214|IPR036412 HAD superfamily|HAD-like superfamily|KdsC family GO:0016788 G3DSA:3.40.50.1000|PF08282|PIRSF006118|SSF56784|TIGR01670 Rmag_1044 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001469|IPR020546|IPR020547|IPR036771|IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain|ATP synthase delta/epsilon subunit, C-terminal domain superfamily|ATP synthase, F1 complex, delta/epsilon subunit|ATP synthase, F1 complex, delta/epsilon subunit, N-terminal|F0F1 ATP synthase delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933 G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF00401|PF02823|SSF46604|SSF51344|TIGR01216 Rmag_1045 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000194|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417|IPR036121 AAA+ ATPase domain|ATP synthase, F1 complex, beta subunit|ATPase, F1/V1 complex, beta/alpha subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0045261|GO:0046034|GO:0046933|GO:1902600 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 Rmag_1046 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000131|IPR023632|IPR035968 ATP synthase, F1 complex, gamma subunit|ATP synthase, F1 complex, gamma subunit conserved site|ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|SSF52943|TIGR01146 Rmag_1047 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417|IPR036121|IPR038376 ATP synthase subunit alpha, N-terminal domain-like superfamily|ATP synthase, F1 complex, alpha subunit|ATP synthase, alpha subunit, C-terminal|ATP synthase, alpha subunit, C-terminal domain superfamily|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0045261|GO:0046034|GO:0046933|GO:1902600 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PS00152|SSF47917|SSF50615|SSF52540|TIGR00962 Rmag_1048 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000711|IPR020781|IPR026015 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily GO:0015986|GO:0016020|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|SSF47928|TIGR01145 Rmag_1049 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002146|IPR005864|IPR028987 ATP synthase, F0 complex, subunit b, bacterial|ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain superfamily GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|SSF81573|TIGR01144 Rmag_1050 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000454|IPR002379|IPR005953|IPR020537|IPR035921|IPR038662 ATP synthase, F0 complex, subunit C|ATP synthase, F0 complex, subunit C, DCCD-binding site|ATP synthase, F0 complex, subunit C, bacterial/chloroplast|F/V-ATP synthase subunit C superfamily|F1F0 ATP synthase subunit C superfamily|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|SSF81333|TIGR01260 Rmag_1051 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000568|IPR023011|IPR035908 ATP synthase, F0 complex, subunit A|ATP synthase, F0 complex, subunit A superfamily|ATP synthase, F0 complex, subunit A, active site GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.120.220|MF_01393|PF00119|PS00449|SSF81336|TIGR01131 Rmag_1053 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR023753|IPR036188 FAD/NAD(P)-binding domain|FAD/NAD(P)-binding domain superfamily GO:0016491|GO:0055114 G3DSA:3.50.50.100|PF07992|SSF51905 Rmag_1054 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, C-terminal|Inorganic polyphosphate/ATP-NAD kinase, N-terminal|NAD kinase|NAD kinase/diacylglycerol kinase-like domain superfamily GO:0003951|GO:0006741|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|SSF111331 Rmag_1055 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 Rmag_1057 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003834|IPR013766|IPR022910|IPR028250|IPR036249|IPR036929 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily|Thiol:disulphide interchange protein DsbD|Thioredoxin domain|Thioredoxin-like superfamily GO:0016020|GO:0017004|GO:0045454|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|MF_00399|PF00085|PF02683|PF11412|SSF52833|SSF74863 Rmag_1058 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001874|IPR036441 Dehydroquinase, class II|Dehydroquinase, class II superfamily GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|SSF52304|TIGR01088 Rmag_1059 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000089|IPR001249|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|SSF51230|TIGR00531 Rmag_1060 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain superfamily|Rudiment single hybrid motif GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 Rmag_1061 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000534|IPR000706|IPR012280|IPR023013|IPR036291 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain superfamily|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|SM00859|SSF51735|SSF55347|TIGR01850 Rmag_1062 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000361|IPR016092|IPR017870|IPR023063|IPR035903 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion protein ErpA|FeS cluster insertion, C-terminal, conserved site|HesB-like domain superfamily GO:0005198|GO:0051536|GO:0097428 G3DSA:2.60.300.12|MF_01380|PF01521|PS01152|SSF89360|TIGR00049 Rmag_1063 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR002020|IPR016142|IPR016143|IPR024176|IPR036969 Citrate synthase|Citrate synthase superfamily|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|SSF48256 Rmag_1064 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|SSF53335|TIGR01934 Rmag_1065 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR003033|IPR036527 SCP2 sterol-binding domain|SCP2 sterol-binding domain superfamily PF02036|SSF55718 Rmag_1066 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain superfamily|UbiB domain GO:0006744 G3DSA:1.10.510.10|PF03109|SSF56112|TIGR01982 Rmag_1067 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001021|IPR011035|IPR020055|IPR020056|IPR020057|IPR029751|IPR037121 Ribosomal protein L25|Ribosomal protein L25, C-terminal|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25, short-form|Ribosomal protein L25/Gln-tRNA synthetase, N-terminal|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|MF_01336|PD012503|PF01386|PF14693|SSF50715|TIGR00731 Rmag_1068 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001328|IPR018171|IPR036416 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase superfamily|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01196|SSF53178|TIGR00447 Rmag_1069 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain superfamily|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain superfamily|YchF, C-terminal domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|SSF52540|SSF81271|TIGR00092 Rmag_1070 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR005995|IPR006124|IPR011258|IPR017849|IPR017850|IPR036646 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain superfamily|BPG-independent PGAM, N-terminal|BPG-independent phosphoglycerate mutase, domain B superfamily|Metalloenzyme|Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0003824|GO:0004619|GO:0005737|GO:0006007|GO:0030145|GO:0046872 G3DSA:3.40.1450.10|G3DSA:3.40.720.10|MF_01038|PF01676|PF06415|PIRSF001492|SSF53649|SSF64158|TIGR01307 Rmag_1071 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|SSF51366|TIGR01163 Rmag_1072 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|SSF52313|TIGR01011 Rmag_1073 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR001816|IPR009060|IPR014039|IPR018101|IPR036402 Elongation factor Ts, dimerisation domain superfamily|Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like superfamily GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01126|PS01127|SSF46934|SSF54713|TIGR00116 Rmag_1075 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 Rmag_1076 /data/g2d_mirror_genbank/Candidatus_Ruthia_magnifica_str_Cm_Calyptogena_magnifica/ASM1510v1_genomic IPR000652|IPR013785|IPR020861|IPR022896|IPR035990 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase superfamily|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|SSF51351|TIGR00419