Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PIRSF PIRSF004557 5 432 5.7E-120 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 108 131 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 395 413 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 265 284 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 PRINTS PR00303 Preprotein translocase SecY subunit signature 15 33 3.0E-91 T 11-10-2018 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 Gene3D G3DSA:1.10.3370.10 3 422 3.1E-158 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 13 422 1.8E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 Pfam PF00344 SecY translocase 68 409 1.4E-114 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 Hamap MF_01465 Protein translocase subunit SecY [secY]. 2 426 28.741 T 11-10-2018 IPR026593 Protein translocase subunit SecY Rmag_0185 5de26b1b56d1245e32367123f79ddb46 432 SUPERFAMILY SSF103491 10 417 1.57E-124 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 Pfam PF00970 Oxidoreductase FAD-binding domain 36 100 5.3E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 PIRSF PIRSF006816 5 282 3.6E-57 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 Gene3D G3DSA:3.40.50.80 102 236 2.7E-14 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 Gene3D G3DSA:2.40.30.10 6 100 2.4E-25 T 11-10-2018 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 SUPERFAMILY SSF52343 97 281 1.57E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 241 281 2.9E-16 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 3.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 PRINTS PR00410 Phenol hydroxylase reductase family signature 37 49 3.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 3.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 Gene3D G3DSA:2.10.240.10 241 282 1.7E-12 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Rmag_0233 01c9109df2cdb8386f9354e3f4a53136 282 SUPERFAMILY SSF63380 7 102 2.51E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Rmag_0287 0a7437ef01dec6e1381a22602575a0e3 67 Pfam PF02416 mttA/Hcf106 family 4 50 4.5E-13 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Rmag_0287 0a7437ef01dec6e1381a22602575a0e3 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 45 1.3E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Rmag_0287 0a7437ef01dec6e1381a22602575a0e3 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 65 19.687 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Rmag_0010 c5efdd775db17178f9313c6861c715ca 407 SUPERFAMILY SSF81342 7 279 2.67E-96 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Rmag_0010 c5efdd775db17178f9313c6861c715ca 407 PIRSF PIRSF038885 1 407 1.1E-157 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Rmag_0010 c5efdd775db17178f9313c6861c715ca 407 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 277 383 6.7E-38 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Rmag_0010 c5efdd775db17178f9313c6861c715ca 407 Pfam PF00033 Cytochrome b/b6/petB 24 210 9.8E-66 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Rmag_0010 c5efdd775db17178f9313c6861c715ca 407 SUPERFAMILY SSF81648 280 401 3.49E-25 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Rmag_0010 c5efdd775db17178f9313c6861c715ca 407 Gene3D G3DSA:1.20.810.10 1 407 7.4E-152 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 231 258 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 259 285 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 159 188 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 45 66 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 122 144 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 27 43 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PRINTS PR00073 Coprogen oxidase signature 87 111 5.9E-83 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 Pfam PF01218 Coproporphyrinogen III oxidase 5 299 3.8E-131 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 163 187 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 PIRSF PIRSF000166 1 300 4.5E-131 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 SUPERFAMILY SSF102886 3 299 7.98E-136 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 54.123 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0496 dfbd7d0364bc0904b4901394a9c0ceaf 302 Gene3D G3DSA:3.40.1500.10 1 299 8.4E-137 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 SUPERFAMILY SSF56425 242 385 3.66E-55 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 PIRSF PIRSF000171 1 626 2.3E-237 T 11-10-2018 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 Gene3D G3DSA:3.90.700.10 267 396 5.9E-262 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 SUPERFAMILY SSF51905 7 455 1.35E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 Pfam PF00890 FAD binding domain 12 244 4.3E-18 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 12 621 0.0 T 11-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 Gene3D G3DSA:3.50.50.90 10 620 5.9E-262 T 11-10-2018 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 SUPERFAMILY SSF46977 489 621 1.44E-37 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0088 fcff3c033906fdb9c8a6d7d86d59d00e 627 Pfam PF02910 Fumarate reductase flavoprotein C-term 501 616 3.8E-7 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Gene3D G3DSA:1.10.220.120 5 67 1.4E-20 T 11-10-2018 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Pfam PF04539 Sigma-70 region 3 446 521 6.1E-26 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 363 588 2.7E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 363 599 9.9E-118 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 391 404 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Pfam PF03979 Sigma-70 factor, region 1.1 8 79 5.7E-20 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 SUPERFAMILY SSF88946 118 434 3.45E-83 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 SUPERFAMILY SSF88659 440 513 2.91E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Gene3D G3DSA:1.10.10.10 517 600 2.4E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 600 39.164 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Pfam PF04542 Sigma-70 region 2 367 436 4.0E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Gene3D G3DSA:1.10.601.10 98 439 4.8E-98 T 11-10-2018 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 560 586 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 PRINTS PR00046 Major sigma-70 factor signature 560 575 1.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 PRINTS PR00046 Major sigma-70 factor signature 391 404 1.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 PRINTS PR00046 Major sigma-70 factor signature 415 423 1.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 PRINTS PR00046 Major sigma-70 factor signature 575 586 1.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 PRINTS PR00046 Major sigma-70 factor signature 539 551 1.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Gene3D G3DSA:1.10.10.10 440 516 8.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Pfam PF04545 Sigma-70, region 4 535 588 1.1E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 SUPERFAMILY SSF88659 497 598 3.18E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Pfam PF04546 Sigma-70, non-essential region 141 336 1.1E-34 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Rmag_0108 23b162972e6cc0859e6c7864e9d51e0e 600 Pfam PF00140 Sigma-70 factor, region 1.2 100 132 8.5E-11 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Rmag_0955 876117c9eddf33edd01787950793d456 205 SUPERFAMILY SSF52833 21 199 6.31E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0955 876117c9eddf33edd01787950793d456 205 Gene3D G3DSA:3.40.30.10 17 202 2.2E-45 T 11-10-2018 Rmag_0955 876117c9eddf33edd01787950793d456 205 PIRSF PIRSF001488 1 205 4.0E-46 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Rmag_0955 876117c9eddf33edd01787950793d456 205 Pfam PF01323 DSBA-like thioredoxin domain 85 179 7.5E-12 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Hamap MF_01382 Protein translocase subunit SecA [secA]. 7 825 19.149 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 SMART SM00957 8 407 3.9E-287 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Gene3D G3DSA:3.40.50.300 25 420 1.9E-172 T 11-10-2018 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 172 192 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 65 89 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 381 398 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 119 129 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 103 117 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 418 431 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 PRINTS PR00906 SecA protein signature 344 366 6.4E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 30 811 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 SUPERFAMILY SSF52540 422 613 7.58E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Pfam PF07516 SecA Wing and Scaffold domain 612 822 2.3E-60 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 SUPERFAMILY SSF52540 7 420 1.24E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Gene3D G3DSA:3.40.50.300 422 615 2.0E-77 T 11-10-2018 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 SUPERFAMILY SSF81767 229 373 6.67E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Gene3D G3DSA:3.90.1440.10 231 373 1.9E-172 T 11-10-2018 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Pfam PF01043 SecA preprotein cross-linking domain 236 363 4.8E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Gene3D G3DSA:1.10.3060.10 616 826 2.5E-65 T 11-10-2018 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 ProSitePatterns PS01312 SecA family signature. 505 520 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 SMART SM00958 230 363 4.4E-70 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Pfam PF02810 SEC-C motif 875 892 4.8E-8 T 11-10-2018 IPR004027 SEC-C motif Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 Pfam PF07517 SecA DEAD-like domain 9 407 3.5E-130 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Rmag_0013 b4b1834a2436726908f2f1aa6ecc4178 892 SUPERFAMILY SSF81886 615 883 2.62E-74 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Rmag_0893 1497e5156251411ac8cb9e18847c3ac1 151 Pfam PF01467 Cytidylyltransferase-like 6 101 2.7E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0893 1497e5156251411ac8cb9e18847c3ac1 151 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 68 3.3E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0893 1497e5156251411ac8cb9e18847c3ac1 151 Gene3D G3DSA:3.40.50.620 2 128 1.6E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0893 1497e5156251411ac8cb9e18847c3ac1 151 SUPERFAMILY SSF52374 3 125 3.94E-32 T 11-10-2018 Rmag_0760 daa43b7dd95d0dfab59d0202b49adc81 249 Pfam PF03799 Cell division protein FtsQ 133 240 1.9E-6 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB Rmag_0760 daa43b7dd95d0dfab59d0202b49adc81 249 Gene3D G3DSA:3.10.20.310 39 110 9.9E-6 T 11-10-2018 Rmag_0760 daa43b7dd95d0dfab59d0202b49adc81 249 Gene3D G3DSA:3.40.50.11690 130 249 1.5E-11 T 11-10-2018 Rmag_0760 daa43b7dd95d0dfab59d0202b49adc81 249 Pfam PF08478 POTRA domain, FtsQ-type 57 108 3.7E-5 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type Rmag_0565 aa7c529053252298399d990f0da71688 75 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 6.9E-32 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Rmag_0565 aa7c529053252298399d990f0da71688 75 Pfam PF00550 Phosphopantetheine attachment site 5 71 4.1E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Rmag_0565 aa7c529053252298399d990f0da71688 75 Hamap MF_01217 Acyl carrier protein [acpP]. 2 75 20.425 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Rmag_0565 aa7c529053252298399d990f0da71688 75 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 39 75 6.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Rmag_0565 aa7c529053252298399d990f0da71688 75 ProSitePatterns PS00012 Phosphopantetheine attachment site. 30 45 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site Rmag_0565 aa7c529053252298399d990f0da71688 75 Gene3D G3DSA:1.10.1200.10 1 75 4.9E-27 T 11-10-2018 IPR036736 ACP-like superfamily Rmag_0565 aa7c529053252298399d990f0da71688 75 SUPERFAMILY SSF47336 2 74 3.93E-21 T 11-10-2018 IPR036736 ACP-like superfamily Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 86 2.0E-9 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 Gene3D G3DSA:3.90.470.20 1 125 8.0E-37 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 95 2.4E-21 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 SUPERFAMILY SSF56214 1 124 1.83E-28 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 3.3E-35 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 24.073 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Rmag_0610 0ea34c64f0560f84c4db71179c095007 127 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 2.1E-26 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Rmag_0277 d19f21eb054bdc15ac60da4d95869cd1 412 SUPERFAMILY SSF111352 8 391 5.89E-131 T 11-10-2018 Rmag_0277 d19f21eb054bdc15ac60da4d95869cd1 412 Pfam PF00909 Ammonium Transporter Family 14 410 1.3E-117 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Rmag_0277 d19f21eb054bdc15ac60da4d95869cd1 412 Gene3D G3DSA:1.10.3430.10 2 412 1.2E-143 T 11-10-2018 IPR029020 Ammonium/urea transporter Rmag_0277 d19f21eb054bdc15ac60da4d95869cd1 412 TIGRFAM TIGR00836 amt: ammonium transporter 12 410 5.4E-138 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Rmag_0277 d19f21eb054bdc15ac60da4d95869cd1 412 ProSitePatterns PS01219 Ammonium transporters signature. 161 186 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Rmag_0288 ab6ff9e884d0f1dd43328c9315d7bf95 105 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 91 2.8E-13 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Rmag_0288 ab6ff9e884d0f1dd43328c9315d7bf95 105 Gene3D G3DSA:1.10.287.1080 1 94 1.4E-29 T 11-10-2018 Rmag_0288 ab6ff9e884d0f1dd43328c9315d7bf95 105 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 19.423 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Rmag_0288 ab6ff9e884d0f1dd43328c9315d7bf95 105 SUPERFAMILY SSF101386 5 94 3.92E-24 T 11-10-2018 Rmag_0288 ab6ff9e884d0f1dd43328c9315d7bf95 105 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 88 2.0E-29 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 SMART SM00471 47 159 1.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Pfam PF02824 TGS domain 392 451 3.9E-15 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 32 692 2.0E-207 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Gene3D G3DSA:1.10.3210.10 5 196 1.2E-71 T 11-10-2018 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 SUPERFAMILY SSF55021 627 699 1.7E-6 T 11-10-2018 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 SUPERFAMILY SSF109604 10 196 4.71E-66 T 11-10-2018 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 SUPERFAMILY SSF81271 379 451 3.71E-16 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 SUPERFAMILY SSF81301 186 396 7.52E-55 T 11-10-2018 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Gene3D G3DSA:3.30.460.10 200 332 3.4E-44 T 11-10-2018 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 SMART SM00954 242 352 6.1E-58 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Gene3D G3DSA:3.10.20.30 385 459 7.5E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Pfam PF13291 ACT domain 622 699 2.1E-13 T 11-10-2018 IPR002912 ACT domain Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Pfam PF13328 HD domain 32 181 1.8E-42 T 11-10-2018 IPR003607 HD/PDEase domain Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Pfam PF04607 Region found in RelA / SpoT proteins 242 352 3.0E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Rmag_0513 aa5c41276e780b0879e35ef60418b30d 700 Gene3D G3DSA:3.30.70.260 623 700 2.2E-11 T 11-10-2018 Rmag_0030 2635d34df04ad3a804cb798c2f26ccd2 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site Rmag_0030 2635d34df04ad3a804cb798c2f26ccd2 299 Pfam PF01040 UbiA prenyltransferase family 22 271 1.8E-56 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Rmag_0030 2635d34df04ad3a804cb798c2f26ccd2 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 5 290 19.648 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Rmag_0030 2635d34df04ad3a804cb798c2f26ccd2 299 Gene3D G3DSA:1.10.357.140 12 187 3.1E-21 T 11-10-2018 Rmag_0030 2635d34df04ad3a804cb798c2f26ccd2 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 8 288 7.4E-93 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.5E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 Pfam PF06071 Protein of unknown function (DUF933) 279 361 5.4E-36 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 Gene3D G3DSA:3.40.50.300 4 278 5.7E-146 T 11-10-2018 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 SUPERFAMILY SSF81271 279 359 1.0E-32 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 SUPERFAMILY SSF52540 3 298 1.08E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.4E-150 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 Gene3D G3DSA:1.10.150.300 113 200 5.7E-146 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 PIRSF PIRSF006641 1 363 1.3E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 Gene3D G3DSA:3.10.20.30 48 361 5.7E-146 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.022 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.2E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.2E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.2E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_1069 2f4db9a84d72e7abd13fa75b715f97ed 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.2E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 Gene3D G3DSA:1.10.240.10 260 365 2.6E-38 T 11-10-2018 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 191 1.6E-57 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 Gene3D G3DSA:3.40.50.620 3 238 7.8E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 Pfam PF00579 tRNA synthetases class I (W and Y) 221 352 4.0E-12 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 Pfam PF00579 tRNA synthetases class I (W and Y) 4 170 6.6E-49 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 SUPERFAMILY SSF52374 5 397 5.64E-87 T 11-10-2018 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.0E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.0E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Rmag_0338 33efca3e4ebefba6b55299a919d38737 399 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.0E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Rmag_0323 76920ef300a27d0e5fce8fbe56119a87 184 SUPERFAMILY SSF52833 25 183 1.24E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0323 76920ef300a27d0e5fce8fbe56119a87 184 ProSitePatterns PS00194 Thioredoxin family active site. 76 94 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Rmag_0323 76920ef300a27d0e5fce8fbe56119a87 184 Gene3D G3DSA:3.40.30.10 35 184 1.0E-35 T 11-10-2018 Rmag_0323 76920ef300a27d0e5fce8fbe56119a87 184 Pfam PF00578 AhpC/TSA family 51 166 3.6E-17 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 SUPERFAMILY SSF50249 69 128 1.93E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 SUPERFAMILY SSF50249 130 187 3.94E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Pfam PF09285 Elongation factor P, C-terminal 131 186 5.4E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 1.2E-21 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 SMART SM01185 69 123 9.9E-23 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 SUPERFAMILY SSF50104 3 63 2.41E-17 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 1.3E-73 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Gene3D G3DSA:2.40.50.140 130 187 1.7E-25 T 11-10-2018 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 PIRSF PIRSF005901 2 187 2.8E-64 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Gene3D G3DSA:2.40.50.140 66 127 2.1E-24 T 11-10-2018 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Hamap MF_00141 Elongation factor P [efp]. 3 187 46.607 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Gene3D G3DSA:2.30.30.30 1 65 8.2E-23 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 SMART SM00841 131 186 1.3E-29 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Rmag_0147 229c22a8ccdb6fb904c481225005fd2b 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.0E-19 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Rmag_0756 3fb1132d5204ccf0c73a22835a8d37bb 156 SUPERFAMILY SSF69765 2 155 4.58E-36 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Rmag_0756 3fb1132d5204ccf0c73a22835a8d37bb 156 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 155 7.4E-40 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Rmag_0756 3fb1132d5204ccf0c73a22835a8d37bb 156 Pfam PF02542 YgbB family 4 154 2.3E-37 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Rmag_0756 3fb1132d5204ccf0c73a22835a8d37bb 156 Gene3D G3DSA:3.30.1330.50 1 156 8.0E-41 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Rmag_0756 3fb1132d5204ccf0c73a22835a8d37bb 156 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Rmag_0022 b2ce67a3f491f5719ef56cef56da7d25 257 Pfam PF10977 Protein of unknown function (DUF2797) 29 253 1.7E-93 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 Rmag_0497 ac58a3352c5db4e3ef49be92eec4c51c 74 Pfam PF01206 Sulfurtransferase TusA 3 72 3.8E-20 T 11-10-2018 IPR001455 TusA-like domain Rmag_0497 ac58a3352c5db4e3ef49be92eec4c51c 74 SUPERFAMILY SSF64307 3 72 7.33E-21 T 11-10-2018 IPR036868 TusA-like domain superfamily Rmag_0497 ac58a3352c5db4e3ef49be92eec4c51c 74 Gene3D G3DSA:3.30.110.40 1 73 1.6E-23 T 11-10-2018 IPR036868 TusA-like domain superfamily Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Gene3D G3DSA:3.30.230.10 224 395 1.0E-67 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Gene3D G3DSA:3.40.50.670 673 800 1.2E-25 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 177 8.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 9 800 9.1E-299 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 SUPERFAMILY SSF56719 397 793 1.75E-86 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 SUPERFAMILY SSF55874 8 222 3.01E-71 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 SUPERFAMILY SSF54211 224 394 4.55E-56 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Pfam PF00204 DNA gyrase B 224 393 5.4E-57 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 423 437 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 271 284 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 74 87 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 508 525 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 528 540 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 39 54 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 734 750 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 117 131 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR00418 DNA topoisomerase II family signature 490 506 5.1E-70 T 11-10-2018 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Pfam PF01751 Toprim domain 422 533 1.2E-17 T 11-10-2018 IPR006171 TOPRIM domain Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Gene3D G3DSA:3.40.50.670 401 580 4.5E-74 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 SMART SM00387 35 179 2.7E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 377 397 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 315 331 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 363 377 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 771 787 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 9 19 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 184 199 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 755 767 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 199 212 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 473 482 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 PRINTS PR01159 DNA gyrase subunit B signature 223 245 3.7E-69 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 730 791 7.2E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Gene3D G3DSA:3.30.565.10 5 223 1.3E-90 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 6 802 97.588 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0003 e518153bf0efdc7eb9b8a753cc2e02f7 802 SMART SM00433 39 795 7.6E-259 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0834 bfe64dfef0e719cfd2337d228bb7cde8 260 Gene3D G3DSA:3.20.20.70 1 260 1.7E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0834 bfe64dfef0e719cfd2337d228bb7cde8 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 9 255 7.5E-105 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Rmag_0834 bfe64dfef0e719cfd2337d228bb7cde8 260 Hamap MF_00443 Thiazole synthase [thiG]. 6 260 39.301 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Rmag_0834 bfe64dfef0e719cfd2337d228bb7cde8 260 SUPERFAMILY SSF110399 6 246 1.27E-83 T 11-10-2018 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 Gene3D G3DSA:3.40.50.620 3 216 5.1E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 SUPERFAMILY SSF55174 320 393 1.44E-15 T 11-10-2018 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 4.9E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 4.9E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 4.9E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 4.9E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 SMART SM00363 333 394 4.0E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 Pfam PF01479 S4 domain 335 378 1.2E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 393 45.619 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 393 1.1E-120 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 Gene3D G3DSA:3.10.290.10 326 393 1.9E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 SUPERFAMILY SSF52374 6 311 4.83E-95 T 11-10-2018 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 Gene3D G3DSA:1.10.240.10 217 325 2.0E-33 T 11-10-2018 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0132 0a7bd280e0a66d4e275e75d9a64bc4c0 394 Pfam PF00579 tRNA synthetases class I (W and Y) 29 315 6.1E-80 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 SUPERFAMILY SSF53223 2 116 2.88E-37 T 11-10-2018 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 SUPERFAMILY SSF51735 117 273 7.21E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 277 36.773 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 115 4.3E-39 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 Gene3D G3DSA:3.40.50.10860 6 270 2.1E-107 T 11-10-2018 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 Gene3D G3DSA:3.40.50.720 4 253 2.1E-107 T 11-10-2018 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 69 96 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 104 125 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 268 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 28 50 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 149 169 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 198 227 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 233 249 2.5E-82 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 70 95 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 254 262 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0840 8d3f8d4f89286265a32cac90ad0d7ca6 277 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 118 274 2.5E-67 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Rmag_0170 9c460aaf25ee2cd3a949d40cda2bcd80 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0170 9c460aaf25ee2cd3a949d40cda2bcd80 110 Gene3D G3DSA:3.90.470.10 1 110 1.0E-42 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0170 9c460aaf25ee2cd3a949d40cda2bcd80 110 SUPERFAMILY SSF54843 2 109 6.67E-41 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0170 9c460aaf25ee2cd3a949d40cda2bcd80 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 4.4E-41 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0170 9c460aaf25ee2cd3a949d40cda2bcd80 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 110 25.174 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0170 9c460aaf25ee2cd3a949d40cda2bcd80 110 Pfam PF00237 Ribosomal protein L22p/L17e 7 108 5.0E-35 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 Pfam PF05193 Peptidase M16 inactive domain 195 371 1.2E-22 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 Pfam PF00675 Insulinase (Peptidase family M16) 38 170 3.9E-25 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 Gene3D G3DSA:3.30.830.10 24 243 4.6E-69 T 11-10-2018 Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 Gene3D G3DSA:3.30.830.10 251 437 1.7E-29 T 11-10-2018 Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 57 80 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 SUPERFAMILY SSF63411 255 437 1.12E-19 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Rmag_0778 58d643d9489c7e868ef8384479b3d123 441 SUPERFAMILY SSF63411 26 231 3.48E-54 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 SUPERFAMILY SSF53383 12 354 8.72E-71 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 354 54.49 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 Gene3D G3DSA:3.40.640.10 43 266 9.1E-104 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 Gene3D G3DSA:3.90.1150.10 10 347 9.1E-104 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 Pfam PF00155 Aminotransferase class I and II 30 349 2.7E-47 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 218 227 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Rmag_0625 8bab564a8710058a2044a99adbdc841f 354 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 353 5.9E-103 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 PIRSF PIRSF001435 1 210 2.5E-54 T 11-10-2018 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 SMART SM00525 186 206 2.5E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.226 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 Pfam PF00633 Helix-hairpin-helix motif 101 127 2.5E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 Gene3D G3DSA:1.10.1670.10 12 203 2.5E-74 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 SUPERFAMILY SSF48150 3 209 3.93E-69 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 SMART SM00478 38 185 2.6E-54 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.4E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 TIGRFAM TIGR01083 nth: endonuclease III 6 194 6.9E-82 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 Gene3D G3DSA:1.10.340.30 21 132 2.5E-74 T 11-10-2018 Rmag_0947 21dcf354bf122db09f90ff44ed9a705c 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.2E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.4E-13 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.4E-13 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.4E-13 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.4E-13 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 Pfam PF01165 Ribosomal protein S21 4 55 6.0E-20 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 58 8.7E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 55 3.0E-12 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.328 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0192 ed72f465a1cb5846fc5a6e4e173a1829 71 Gene3D G3DSA:1.20.5.1150 16 54 1.5E-17 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0420 4c6404ee8c840e2d83b48f7ffb2b1817 136 SUPERFAMILY SSF57716 100 134 4.42E-8 T 11-10-2018 Rmag_0420 4c6404ee8c840e2d83b48f7ffb2b1817 136 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 136 25.478 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Rmag_0420 4c6404ee8c840e2d83b48f7ffb2b1817 136 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 98 133 8.6E-9 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Rmag_0420 4c6404ee8c840e2d83b48f7ffb2b1817 136 Gene3D G3DSA:1.20.120.910 8 136 1.3E-32 T 11-10-2018 Rmag_0420 4c6404ee8c840e2d83b48f7ffb2b1817 136 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 4.6E-46 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Rmag_0420 4c6404ee8c840e2d83b48f7ffb2b1817 136 SUPERFAMILY SSF109635 8 99 1.18E-30 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Pfam PF08245 Mur ligase middle domain 102 289 8.7E-41 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Gene3D G3DSA:3.90.190.20 316 464 3.1E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Gene3D G3DSA:3.40.1190.10 94 314 4.5E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 SUPERFAMILY SSF63418 1 92 6.15E-20 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 459 3.1E-133 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Pfam PF01225 Mur ligase family, catalytic domain 18 91 1.3E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 461 29.821 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Gene3D G3DSA:3.40.1390.10 1 93 6.3E-20 T 11-10-2018 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 394 5.2E-20 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 SUPERFAMILY SSF53623 97 307 4.58E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 SUPERFAMILY SSF53244 312 459 5.13E-39 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0155 a22347ad0cf9dfd4e176b8026c10edf3 464 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 100 123 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 ProSitePatterns PS00517 Ribonuclease III family signature. 33 41 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 SMART SM00535 16 144 2.5E-45 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 Pfam PF00035 Double-stranded RNA binding motif 151 218 3.0E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 SUPERFAMILY SSF69065 3 153 4.19E-43 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 SMART SM00358 151 219 2.6E-16 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 Gene3D G3DSA:3.30.160.20 149 221 6.2E-17 T 11-10-2018 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 SUPERFAMILY SSF54768 104 218 1.48E-23 T 11-10-2018 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 4 218 4.7E-64 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 Pfam PF14622 Ribonuclease-III-like 16 133 7.9E-27 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 Hamap MF_00104 Ribonuclease 3 [rnc]. 4 215 26.286 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Rmag_0614 95492670ac4dc9cd0f50a9bd0a5d4a28 221 Gene3D G3DSA:1.10.1520.10 1 143 4.7E-41 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Rmag_0200 b459ae5d9c9b474228547c6f6a441171 199 Pfam PF01926 50S ribosome-binding GTPase 27 145 3.1E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0200 b459ae5d9c9b474228547c6f6a441171 199 SUPERFAMILY SSF52540 20 193 1.2E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0200 b459ae5d9c9b474228547c6f6a441171 199 Gene3D G3DSA:3.40.50.300 2 196 8.3E-47 T 11-10-2018 Rmag_0200 b459ae5d9c9b474228547c6f6a441171 199 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 25.316 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Rmag_0200 b459ae5d9c9b474228547c6f6a441171 199 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 191 3.0E-68 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 PIRSF PIRSF001438 1 304 2.1E-111 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 294 5.8E-106 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 296 35.75 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 Gene3D G3DSA:3.40.190.10 102 201 5.1E-79 T 11-10-2018 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 211 1.6E-73 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 4.6E-45 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 4.6E-45 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 4.6E-45 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 4.6E-45 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 4.6E-45 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 Gene3D G3DSA:3.30.160.40 221 304 3.4E-23 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 SUPERFAMILY SSF53850 3 218 1.03E-78 T 11-10-2018 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 294 1.2E-16 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 SUPERFAMILY SSF54782 220 303 3.27E-23 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0783 ba3269e1a5240a5e4ae898dac6bfc52f 304 Gene3D G3DSA:3.40.190.10 5 209 5.1E-79 T 11-10-2018 Rmag_0388 ebfc27f78665938fd4fab1e13e53ee7b 199 Gene3D G3DSA:3.40.50.150 15 199 1.8E-38 T 11-10-2018 Rmag_0388 ebfc27f78665938fd4fab1e13e53ee7b 199 Pfam PF05175 Methyltransferase small domain 29 195 2.1E-34 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Rmag_0388 ebfc27f78665938fd4fab1e13e53ee7b 199 SUPERFAMILY SSF53335 20 187 8.2E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0080 d6f10577572631698a158e8903768317 1053 Pfam PF13361 UvrD-like helicase C-terminal domain 463 819 1.4E-23 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Rmag_0080 d6f10577572631698a158e8903768317 1053 Gene3D G3DSA:3.40.50.300 524 612 3.2E-10 T 11-10-2018 Rmag_0080 d6f10577572631698a158e8903768317 1053 SUPERFAMILY SSF52540 4 827 5.96E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0080 d6f10577572631698a158e8903768317 1053 Gene3D G3DSA:3.40.50.300 703 873 1.7E-19 T 11-10-2018 Rmag_0080 d6f10577572631698a158e8903768317 1053 SUPERFAMILY SSF52980 900 1042 1.18E-8 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Rmag_0080 d6f10577572631698a158e8903768317 1053 Gene3D G3DSA:3.40.50.300 2 197 1.4E-21 T 11-10-2018 Rmag_0080 d6f10577572631698a158e8903768317 1053 Gene3D G3DSA:3.90.320.10 950 1052 7.4E-7 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Rmag_0080 d6f10577572631698a158e8903768317 1053 Gene3D G3DSA:3.40.50.300 345 484 1.3E-26 T 11-10-2018 Rmag_0080 d6f10577572631698a158e8903768317 1053 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 449 8.7E-39 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Rmag_0366 518ee3b48234bbe811147c7051822276 323 Pfam PF00348 Polyprenyl synthetase 32 272 1.3E-74 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Rmag_0366 518ee3b48234bbe811147c7051822276 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 204 216 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Rmag_0366 518ee3b48234bbe811147c7051822276 323 Gene3D G3DSA:1.10.600.10 1 323 6.0E-105 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Rmag_0366 518ee3b48234bbe811147c7051822276 323 SUPERFAMILY SSF48576 2 322 5.92E-95 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Rmag_0366 518ee3b48234bbe811147c7051822276 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 96 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 6.3E-49 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 7.5E-91 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Gene3D G3DSA:1.10.8.210 149 207 6.2E-11 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 SUPERFAMILY SSF53790 212 458 3.93E-81 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 9.2E-20 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Pfam PF14824 Sirohaem biosynthesis protein central 121 145 3.0E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Gene3D G3DSA:3.30.160.110 113 148 6.5E-18 T 11-10-2018 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 7.9E-72 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Pfam PF13241 Putative NAD(P)-binding 6 115 7.7E-27 T 11-10-2018 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Gene3D G3DSA:3.30.950.10 332 469 5.5E-46 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 PIRSF PIRSF036426 1 468 4.3E-200 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Gene3D G3DSA:3.40.50.720 1 112 7.3E-31 T 11-10-2018 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 SUPERFAMILY SSF51735 1 112 2.56E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Gene3D G3DSA:3.40.1010.10 215 331 9.4E-45 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 SUPERFAMILY SSF75615 114 209 7.85E-27 T 11-10-2018 Rmag_0270 9656231bffab72534ee850b4d97fbdc2 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 52.526 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Rmag_0717 a45c0a781c8b1a899e871a037cee401b 106 Pfam PF03960 ArsC family 2 104 1.0E-13 T 11-10-2018 IPR006660 Arsenate reductase-like Rmag_0717 a45c0a781c8b1a899e871a037cee401b 106 Gene3D G3DSA:3.40.30.10 1 106 6.3E-37 T 11-10-2018 Rmag_0717 a45c0a781c8b1a899e871a037cee401b 106 SUPERFAMILY SSF52833 1 104 3.84E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0717 a45c0a781c8b1a899e871a037cee401b 106 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 104 1.2E-29 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Rmag_0179 1f57fb796e9c4a33ca4272dbc0888e55 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.771 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0179 1f57fb796e9c4a33ca4272dbc0888e55 131 Pfam PF00410 Ribosomal protein S8 5 131 3.5E-51 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0179 1f57fb796e9c4a33ca4272dbc0888e55 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0179 1f57fb796e9c4a33ca4272dbc0888e55 131 SUPERFAMILY SSF56047 2 131 3.92E-47 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0179 1f57fb796e9c4a33ca4272dbc0888e55 131 Gene3D G3DSA:3.30.1490.10 74 130 1.9E-25 T 11-10-2018 Rmag_0179 1f57fb796e9c4a33ca4272dbc0888e55 131 Gene3D G3DSA:3.30.1370.30 2 73 5.3E-28 T 11-10-2018 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.6E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 SUPERFAMILY SSF47729 1 90 8.39E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 SMART SM00411 1 90 1.9E-42 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 Gene3D G3DSA:4.10.520.10 1 91 4.5E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.7E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.7E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0380 df15643d31969fe9fe10c7c68253078b 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.7E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 Gene3D G3DSA:3.40.50.2000 160 322 3.4E-99 T 11-10-2018 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 SUPERFAMILY SSF53756 3 335 1.02E-105 T 11-10-2018 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 176 329 1.0E-34 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 Gene3D G3DSA:3.40.50.2000 6 328 3.4E-99 T 11-10-2018 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 142 3.5E-35 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 338 32.305 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0500 95b23072d2dd853536390f943dcfba71 338 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 333 2.0E-88 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 Gene3D G3DSA:3.30.70.890 159 281 8.3E-24 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 SUPERFAMILY SSF55060 159 279 7.67E-22 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 274 29.8 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 Gene3D G3DSA:3.30.230.10 1 158 1.7E-54 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 PIRSF PIRSF010376 1 282 4.2E-83 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 Pfam PF00288 GHMP kinases N terminal domain 86 142 6.8E-11 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 SUPERFAMILY SSF54211 2 157 1.67E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0110 038208a7c6b6b913c7d006fb18ab9311 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 279 1.1E-73 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Rmag_0670 b90930114f0318a354e2a8e50eeb1474 301 Pfam PF06189 5'-nucleotidase 43 300 1.8E-109 T 11-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 Gene3D G3DSA:2.40.100.10 1 160 8.4E-58 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.1E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 109 7.1E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.1E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 PIRSF PIRSF001467 1 161 8.9E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 155 2.7E-45 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 SUPERFAMILY SSF50891 1 158 3.94E-52 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Rmag_0920 b3017e0f364e17e2f1ee58daba0f83fa 162 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 36.871 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 753 3.9E-148 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 PIRSF PIRSF000382 1 758 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 757 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 SUPERFAMILY SSF51726 5 394 1.29E-103 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 SUPERFAMILY SSF51726 396 756 2.22E-118 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 315 6.6E-114 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Rmag_0985 af204dc22c01bf50a3bb170015431c76 758 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Rmag_0208 4b5176920165865e78d97efcab456b47 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 727 1.9E-53 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 731 749 1.9E-53 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 1.9E-53 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 361 380 1.9E-53 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 600 616 1.9E-53 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 Hamap MF_01973 Lon protease [lon]. 17 777 68.494 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Rmag_0208 4b5176920165865e78d97efcab456b47 778 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 207 1.6E-37 T 11-10-2018 IPR003111 Lon, substrate-binding domain Rmag_0208 4b5176920165865e78d97efcab456b47 778 Gene3D G3DSA:3.40.50.300 318 495 3.9E-61 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 681 689 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Rmag_0208 4b5176920165865e78d97efcab456b47 778 SUPERFAMILY SSF52540 319 591 7.24E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0208 4b5176920165865e78d97efcab456b47 778 TIGRFAM TIGR00763 lon: endopeptidase La 18 776 1.0E-287 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Rmag_0208 4b5176920165865e78d97efcab456b47 778 Gene3D G3DSA:3.30.230.10 590 777 8.7E-80 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0208 4b5176920165865e78d97efcab456b47 778 Gene3D G3DSA:1.10.8.60 496 589 1.0E-30 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 575 777 1.0E-94 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Rmag_0208 4b5176920165865e78d97efcab456b47 778 PIRSF PIRSF001174 4 778 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Rmag_0208 4b5176920165865e78d97efcab456b47 778 Gene3D G3DSA:2.30.130.40 11 121 1.8E-33 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 SMART SM00382 353 499 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0208 4b5176920165865e78d97efcab456b47 778 Gene3D G3DSA:1.20.58.1480 127 251 2.0E-37 T 11-10-2018 Rmag_0208 4b5176920165865e78d97efcab456b47 778 SUPERFAMILY SSF54211 600 775 2.84E-57 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0208 4b5176920165865e78d97efcab456b47 778 SUPERFAMILY SSF88697 16 207 2.24E-41 T 11-10-2018 IPR015947 PUA-like superfamily Rmag_0208 4b5176920165865e78d97efcab456b47 778 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 357 493 1.4E-18 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0208 4b5176920165865e78d97efcab456b47 778 SMART SM00464 16 208 4.4E-60 T 11-10-2018 IPR003111 Lon, substrate-binding domain Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 Pfam PF00085 Thioredoxin 5 106 6.3E-30 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 PIRSF PIRSF000077 2 108 9.8E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 PRINTS PR00421 Thioredoxin family signature 24 32 8.6E-7 T 11-10-2018 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 PRINTS PR00421 Thioredoxin family signature 72 83 8.6E-7 T 11-10-2018 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 PRINTS PR00421 Thioredoxin family signature 32 41 8.6E-7 T 11-10-2018 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 Gene3D G3DSA:3.40.30.10 1 108 5.1E-33 T 11-10-2018 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.0E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Rmag_0476 a9aac341cd8d499d3b0c01769b1247f0 108 SUPERFAMILY SSF52833 3 106 2.57E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0509 73717061e628f6a030a677040035fc48 130 ProSitePatterns PS00892 HIT domain signature. 83 101 - T 11-10-2018 IPR019808 Histidine triad, conserved site Rmag_0509 73717061e628f6a030a677040035fc48 130 SUPERFAMILY SSF54197 4 114 1.48E-37 T 11-10-2018 IPR036265 HIT-like superfamily Rmag_0509 73717061e628f6a030a677040035fc48 130 Pfam PF01230 HIT domain 12 104 5.8E-23 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0509 73717061e628f6a030a677040035fc48 130 PRINTS PR00332 Histidine triad family signature 90 100 1.8E-7 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0509 73717061e628f6a030a677040035fc48 130 PRINTS PR00332 Histidine triad family signature 23 41 1.8E-7 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0509 73717061e628f6a030a677040035fc48 130 Gene3D G3DSA:3.30.428.10 2 123 9.0E-40 T 11-10-2018 IPR036265 HIT-like superfamily Rmag_0652 53e542bccdc462617195973394dbc349 152 Pfam PF01252 Signal peptidase (SPase) II 10 147 4.1E-33 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_0652 53e542bccdc462617195973394dbc349 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 47 55 3.4E-16 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_0652 53e542bccdc462617195973394dbc349 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 95 110 3.4E-16 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_0652 53e542bccdc462617195973394dbc349 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 131 147 3.4E-16 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_0652 53e542bccdc462617195973394dbc349 152 TIGRFAM TIGR00077 lspA: signal peptidase II 5 148 1.4E-37 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_0652 53e542bccdc462617195973394dbc349 152 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 152 14.991 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_0652 53e542bccdc462617195973394dbc349 152 ProSitePatterns PS00855 Signal peptidases II signature. 98 110 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 Gene3D G3DSA:2.170.120.20 98 199 2.5E-21 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 SUPERFAMILY SSF50715 1 198 7.5E-48 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 192 5.4E-24 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 171 4.4E-41 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 95 1.0E-21 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 189 27.302 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 Gene3D G3DSA:2.40.240.10 1 95 2.0E-30 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 22.093 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Rmag_1067 3f6c1f2498abb7e8f88511ea88c190ee 222 Pfam PF01386 Ribosomal L25p family 5 92 1.0E-23 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Rmag_0948 7ebbfabd2234f8b59e4a2904c557327d 284 SUPERFAMILY SSF56112 22 271 2.77E-38 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Rmag_0948 7ebbfabd2234f8b59e4a2904c557327d 284 Pfam PF03881 Fructosamine kinase 6 272 1.8E-65 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Rmag_0948 7ebbfabd2234f8b59e4a2904c557327d 284 Gene3D G3DSA:3.30.200.20 1 82 1.0E-8 T 11-10-2018 Rmag_0948 7ebbfabd2234f8b59e4a2904c557327d 284 PIRSF PIRSF006221 1 281 4.8E-69 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Rmag_0948 7ebbfabd2234f8b59e4a2904c557327d 284 Gene3D G3DSA:3.90.1200.10 84 281 7.5E-57 T 11-10-2018 Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 Pfam PF01168 Alanine racemase, N-terminal domain 3 211 7.6E-23 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 211 3.0E-67 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 4 210 29.942 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 69 83 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 Gene3D G3DSA:3.20.20.10 1 212 1.5E-68 T 11-10-2018 IPR029066 PLP-binding barrel Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 PIRSF PIRSF004848 1 212 5.3E-68 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Rmag_0234 98d7e7bf1dc1f23f4c569370b848ec95 212 SUPERFAMILY SSF51419 2 209 1.44E-67 T 11-10-2018 IPR029066 PLP-binding barrel Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 138 165 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 Gene3D G3DSA:3.30.70.260 306 385 2.1E-16 T 11-10-2018 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 Gene3D G3DSA:3.40.50.720 84 276 3.1E-71 T 11-10-2018 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 SUPERFAMILY SSF55021 307 383 1.62E-11 T 11-10-2018 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 Gene3D G3DSA:3.40.50.720 13 300 3.1E-71 T 11-10-2018 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 94 272 1.2E-36 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 SUPERFAMILY SSF52283 7 106 1.21E-20 T 11-10-2018 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 304 1.6E-19 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Rmag_0627 7a5100915fd46f96e26173a5e9285502 385 SUPERFAMILY SSF51735 86 273 2.19E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0949 ab465f4cde3010fc84c548e3d7bbace5 206 Pfam PF00117 Glutamine amidotransferase class-I 6 200 3.1E-20 T 11-10-2018 IPR017926 Glutamine amidotransferase Rmag_0949 ab465f4cde3010fc84c548e3d7bbace5 206 PIRSF PIRSF000495 2 206 8.4E-66 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Rmag_0949 ab465f4cde3010fc84c548e3d7bbace5 206 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 33.792 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Rmag_0949 ab465f4cde3010fc84c548e3d7bbace5 206 Gene3D G3DSA:3.40.50.880 1 205 1.7E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0949 ab465f4cde3010fc84c548e3d7bbace5 206 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 202 5.5E-64 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Rmag_0949 ab465f4cde3010fc84c548e3d7bbace5 206 SUPERFAMILY SSF52317 4 203 7.7E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 303 4.8E-72 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 Gene3D G3DSA:3.30.2350.10 86 303 4.6E-66 T 11-10-2018 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 SUPERFAMILY SSF55120 89 301 6.24E-56 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 Pfam PF00849 RNA pseudouridylate synthase 95 238 8.6E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 SUPERFAMILY SSF55174 14 65 7.51E-8 T 11-10-2018 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 Pfam PF01479 S4 domain 15 61 7.1E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 Gene3D G3DSA:3.10.290.10 4 67 7.0E-12 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Rmag_0072 91caa5ec50ff7962098ca8dec4f7f89f 303 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 131 145 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 SMART SM00322 60 125 3.5E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 SUPERFAMILY SSF54814 2 106 1.57E-39 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.3E-36 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 1.6E-92 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 Pfam PF07650 KH domain 38 111 1.6E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 Gene3D G3DSA:3.30.300.20 17 107 2.7E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.194 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 SUPERFAMILY SSF54821 107 206 2.75E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0171 3d3b8f733e7792bda0ba933e537f0e45 232 Gene3D G3DSA:3.30.1140.32 108 208 1.2E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 310 1.8E-24 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 SUPERFAMILY SSF55347 149 308 4.78E-52 T 11-10-2018 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 1.2E-34 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 SUPERFAMILY SSF51735 2 173 6.78E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 SMART SM00859 3 141 2.5E-54 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 Gene3D G3DSA:3.40.50.720 3 326 2.2E-127 T 11-10-2018 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 340 2.2E-130 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 Gene3D G3DSA:3.30.360.10 147 308 2.2E-127 T 11-10-2018 Rmag_1061 553f1784b41b0cfc26e63781a18d059f 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 42.226 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_0617 b441e4c6783201b2c5875ebeed06782a 259 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 8 249 4.8E-72 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Rmag_0617 b441e4c6783201b2c5875ebeed06782a 259 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 5 256 18.912 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Rmag_0617 b441e4c6783201b2c5875ebeed06782a 259 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Rmag_0617 b441e4c6783201b2c5875ebeed06782a 259 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 256 6.1E-74 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Rmag_0777 cee890ed7ccb59e488dbacfd486244e1 429 Gene3D G3DSA:3.30.830.10 241 429 6.0E-44 T 11-10-2018 Rmag_0777 cee890ed7ccb59e488dbacfd486244e1 429 Pfam PF00675 Insulinase (Peptidase family M16) 44 178 1.9E-11 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Rmag_0777 cee890ed7ccb59e488dbacfd486244e1 429 Pfam PF05193 Peptidase M16 inactive domain 186 360 1.5E-25 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Rmag_0777 cee890ed7ccb59e488dbacfd486244e1 429 SUPERFAMILY SSF63411 241 426 6.38E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Rmag_0777 cee890ed7ccb59e488dbacfd486244e1 429 Gene3D G3DSA:3.30.830.10 21 232 7.7E-43 T 11-10-2018 Rmag_0777 cee890ed7ccb59e488dbacfd486244e1 429 SUPERFAMILY SSF63411 17 223 9.33E-37 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 3.2E-10 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 377 3.2E-10 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.2E-10 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 3.2E-10 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 3.2E-10 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 627 764 4.1E-22 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Gene3D G3DSA:1.10.10.1100 419 470 1.9E-11 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 SUPERFAMILY SSF55124 495 620 2.78E-20 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 769 1.3E-224 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Gene3D G3DSA:3.30.390.30 317 395 6.5E-7 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Pfam PF04324 BFD-like [2Fe-2S] binding domain 420 465 1.7E-7 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Pfam PF04324 BFD-like [2Fe-2S] binding domain 480 529 1.1E-6 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PIRSF PIRSF037149 1 787 1.8E-254 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 SUPERFAMILY SSF51905 145 308 1.63E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Gene3D G3DSA:3.90.480.10 527 623 6.4E-8 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Gene3D G3DSA:3.30.413.10 625 787 2.0E-29 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Gene3D G3DSA:3.50.50.60 111 245 6.2E-76 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 674 690 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 5.2E-47 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 SUPERFAMILY SSF51905 2 189 9.72E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.7E-16 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.7E-16 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.7E-16 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.7E-16 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.7E-16 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 SUPERFAMILY SSF56014 628 771 1.83E-39 T 11-10-2018 Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Gene3D G3DSA:3.50.50.60 5 280 6.2E-76 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0688 6117efb57e822236ea1279ca28bcced0 791 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 553 618 4.9E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 513 1.4E-150 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 SMART SM00434 18 506 2.1E-269 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 SUPERFAMILY SSF56719 37 528 1.1E-173 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 18 847 0.0 T 11-10-2018 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 746 1.7E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 547 591 1.3E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 696 4.6E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 800 844 2.1E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 641 1.1E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 751 795 3.1E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Gene3D G3DSA:3.30.1360.40 243 339 2.6E-219 T 11-10-2018 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 848 23.791 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Gene3D G3DSA:1.10.268.10 376 500 2.6E-219 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Gene3D G3DSA:2.120.10.90 542 848 1.9E-119 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 Gene3D G3DSA:3.90.199.10 40 528 2.6E-219 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Rmag_0306 14095d3b2894206f0bea429a63eeb9c8 861 SUPERFAMILY SSF101904 540 857 1.31E-106 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Rmag_0546 73c61b59040c50bbc4538078e66896e9 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 319 32.356 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Rmag_0546 73c61b59040c50bbc4538078e66896e9 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 313 2.1E-118 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Rmag_0546 73c61b59040c50bbc4538078e66896e9 332 Gene3D G3DSA:3.40.718.10 1 321 1.6E-113 T 11-10-2018 Rmag_0546 73c61b59040c50bbc4538078e66896e9 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 312 9.2E-102 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Rmag_0546 73c61b59040c50bbc4538078e66896e9 332 SUPERFAMILY SSF53659 3 319 8.48E-99 T 11-10-2018 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 Hamap MF_00900 GTPase HflX [hflX]. 34 397 46.252 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 PIRSF PIRSF006809 6 425 1.4E-133 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 Pfam PF16360 GTP-binding GTPase Middle Region 121 199 6.2E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 SUPERFAMILY SSF52540 205 375 5.99E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 Pfam PF01926 50S ribosome-binding GTPase 207 325 5.3E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 227 1.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 274 292 1.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 Gene3D G3DSA:3.40.50.11060 23 145 3.1E-32 T 11-10-2018 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 Gene3D G3DSA:3.40.50.300 204 378 7.0E-36 T 11-10-2018 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 16 368 2.5E-141 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Rmag_0207 6d3fbae42f826572f5186a4c4848581f 441 Pfam PF13167 GTP-binding GTPase N-terminal 35 119 9.3E-28 T 11-10-2018 IPR025121 GTPase HflX, N-terminal Rmag_0374 a0bd7daebaae50cc405ae7af1d5bf276 146 Pfam PF00075 RNase H 2 140 4.2E-45 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Rmag_0374 a0bd7daebaae50cc405ae7af1d5bf276 146 Gene3D G3DSA:3.30.420.10 1 146 4.5E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Rmag_0374 a0bd7daebaae50cc405ae7af1d5bf276 146 SUPERFAMILY SSF53098 1 143 3.16E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0374 a0bd7daebaae50cc405ae7af1d5bf276 146 Hamap MF_00042 Ribonuclease H [rnhA]. 1 146 28.944 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 Gene3D G3DSA:3.20.190.10 2 128 1.1E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.0E-23 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 Gene3D G3DSA:1.10.8.50 139 269 1.4E-42 T 11-10-2018 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 SUPERFAMILY SSF81624 2 134 5.89E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 Pfam PF06827 Zinc finger found in FPG and IleRS 244 268 1.3E-5 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 SUPERFAMILY SSF46946 130 221 3.79E-27 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.3E-89 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 SMART SM00898 2 116 7.4E-46 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.8E-29 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 SUPERFAMILY SSF57716 217 268 2.6E-13 T 11-10-2018 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 SMART SM01232 129 221 6.3E-41 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Rmag_0332 8825c7e4626e0b183d8c4894795a3ee4 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 39.481 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 SUPERFAMILY SSF52016 159 358 2.16E-59 T 11-10-2018 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Pfam PF06434 Aconitate hydratase 2 N-terminus 166 368 2.9E-95 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 SUPERFAMILY SSF74778 1 156 2.35E-52 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 3 838 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Gene3D G3DSA:3.30.499.10 669 849 1.5E-58 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Gene3D G3DSA:3.30.499.10 388 515 1.2E-140 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Gene3D G3DSA:3.40.1060.10 371 667 1.2E-140 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Pfam PF11791 Aconitate B N-terminal domain 4 153 5.5E-53 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Pfam PF00330 Aconitase family (aconitate hydratase) 458 800 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Gene3D G3DSA:3.20.19.10 159 347 6.3E-65 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 ProSitePatterns PS00450 Aconitase family signature 1. 688 705 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 Gene3D G3DSA:1.25.40.310 1 158 8.5E-50 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 PIRSF PIRSF036687 1 844 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Rmag_0992 b9aa862c12644c5e96fc94d1ea1d97ed 852 SUPERFAMILY SSF53732 365 842 3.92E-138 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Gene3D G3DSA:3.60.20.10 2 244 6.6E-74 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Pfam PF01380 SIS domain 293 420 4.7E-29 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Pfam PF01380 SIS domain 472 597 1.7E-23 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 615 2.6E-243 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Pfam PF13522 Glutamine amidotransferase domain 64 195 3.3E-17 T 11-10-2018 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Gene3D G3DSA:3.40.50.10490 252 614 7.2E-139 T 11-10-2018 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 SUPERFAMILY SSF53697 248 615 9.28E-102 T 11-10-2018 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 615 38.486 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 Gene3D G3DSA:3.40.50.10490 452 600 7.2E-139 T 11-10-2018 Rmag_0883 14d5d948a3aa9f626acbf4c6b1383c4a 615 SUPERFAMILY SSF56235 2 237 1.89E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_0700 6ac512473536cba443a17c144439bc9a 269 SMART SM00382 33 154 0.0022 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0700 6ac512473536cba443a17c144439bc9a 269 Pfam PF07728 AAA domain (dynein-related subfamily) 36 170 1.3E-30 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Rmag_0700 6ac512473536cba443a17c144439bc9a 269 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 183 266 4.1E-29 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Rmag_0700 6ac512473536cba443a17c144439bc9a 269 SUPERFAMILY SSF52540 19 223 4.53E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0700 6ac512473536cba443a17c144439bc9a 269 Gene3D G3DSA:3.40.50.300 19 188 2.2E-29 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 SUPERFAMILY SSF53706 215 652 7.76E-63 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 123 5.4E-18 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Gene3D G3DSA:3.30.70.20 126 206 6.3E-7 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 147 157 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 6 628 2.4E-178 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Gene3D G3DSA:3.10.20.740 4 125 2.2E-38 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Gene3D G3DSA:3.40.228.10 347 403 4.7E-10 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 SUPERFAMILY SSF54292 4 76 1.27E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Gene3D G3DSA:3.40.50.740 281 346 4.7E-10 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 100 112 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 SUPERFAMILY SSF54862 78 211 3.77E-34 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.8E-18 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Pfam PF00384 Molybdopterin oxidoreductase 274 630 2.7E-24 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 Gene3D G3DSA:3.40.50.740 448 665 2.7E-10 T 11-10-2018 Rmag_0243 d62508b985b69d23b27628dcf8395437 753 SMART SM00929 85 125 1.5E-21 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 PIRSF PIRSF001604 202 614 1.5E-91 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 PIRSF PIRSF001604 2 207 1.7E-13 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Gene3D G3DSA:1.10.150.20 380 449 1.8E-6 T 11-10-2018 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Pfam PF14520 Helix-hairpin-helix domain 392 445 9.4E-6 T 11-10-2018 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 SUPERFAMILY SSF56091 7 270 2.07E-33 T 11-10-2018 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Gene3D G3DSA:3.40.50.10190 531 614 5.3E-18 T 11-10-2018 IPR036420 BRCT domain superfamily Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 19 138 5.8E-9 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 SUPERFAMILY SSF47781 354 509 2.89E-19 T 11-10-2018 IPR010994 RuvA domain 2-like Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 SUPERFAMILY SSF52113 543 608 1.0E-10 T 11-10-2018 IPR036420 BRCT domain superfamily Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Hamap MF_01588 DNA ligase [ligA]. 2 614 29.107 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 544 605 7.6E-5 T 11-10-2018 IPR001357 BRCT domain Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 SUPERFAMILY SSF50249 275 349 7.2E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Gene3D G3DSA:3.30.470.90 67 206 3.5E-10 T 11-10-2018 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 279 348 1.1E-17 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 Gene3D G3DSA:2.40.50.140 274 346 4.3E-18 T 11-10-2018 Rmag_0280 7b579b2ab783c6bb1c9b70513dc588be 614 SMART SM00532 4 396 1.2E-16 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Rmag_0596 587222d71c567ec0a215571f892eed40 615 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0596 587222d71c567ec0a215571f892eed40 615 Pfam PF00005 ABC transporter 19 178 5.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0596 587222d71c567ec0a215571f892eed40 615 Pfam PF12848 ABC transporter 217 287 1.1E-6 T 11-10-2018 IPR032781 ABC-transporter extension domain Rmag_0596 587222d71c567ec0a215571f892eed40 615 Pfam PF00005 ABC transporter 330 463 5.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0596 587222d71c567ec0a215571f892eed40 615 Gene3D G3DSA:3.40.50.300 3 272 3.4E-59 T 11-10-2018 Rmag_0596 587222d71c567ec0a215571f892eed40 615 Gene3D G3DSA:3.40.50.300 276 541 2.2E-58 T 11-10-2018 Rmag_0596 587222d71c567ec0a215571f892eed40 615 SMART SM00382 28 223 6.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0596 587222d71c567ec0a215571f892eed40 615 SMART SM00382 338 508 4.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0596 587222d71c567ec0a215571f892eed40 615 Pfam PF16326 ABC transporter C-terminal domain 549 615 9.0E-13 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Rmag_0596 587222d71c567ec0a215571f892eed40 615 SUPERFAMILY SSF52540 2 225 1.66E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0596 587222d71c567ec0a215571f892eed40 615 SUPERFAMILY SSF52540 304 511 3.85E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0596 587222d71c567ec0a215571f892eed40 615 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0596 587222d71c567ec0a215571f892eed40 615 Gene3D G3DSA:1.10.287.380 542 615 6.3E-14 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Rmag_1025 a275c1709894633da8cccf553e6c1052 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 47 60 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1025 a275c1709894633da8cccf553e6c1052 265 Pfam PF00290 Tryptophan synthase alpha chain 14 263 1.0E-79 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1025 a275c1709894633da8cccf553e6c1052 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 14 259 1.9E-72 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1025 a275c1709894633da8cccf553e6c1052 265 SUPERFAMILY SSF51366 1 259 1.51E-80 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_1025 a275c1709894633da8cccf553e6c1052 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 13 263 32.592 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1025 a275c1709894633da8cccf553e6c1052 265 Gene3D G3DSA:3.20.20.70 1 265 4.5E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0139 e3f3794c62cc8721bfd73e671eb2e647 191 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.5E-85 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Rmag_0139 e3f3794c62cc8721bfd73e671eb2e647 191 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.278 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Rmag_0139 e3f3794c62cc8721bfd73e671eb2e647 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.8E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Rmag_0139 e3f3794c62cc8721bfd73e671eb2e647 191 PIRSF PIRSF006102 1 191 2.8E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Rmag_0268 eba670f602a201cec04ea517a693104d 224 SUPERFAMILY SSF52540 13 202 2.3E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0268 eba670f602a201cec04ea517a693104d 224 Gene3D G3DSA:3.40.50.300 1 154 5.1E-20 T 11-10-2018 Rmag_0268 eba670f602a201cec04ea517a693104d 224 Pfam PF00308 Bacterial dnaA protein 10 202 7.9E-13 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Rmag_0268 eba670f602a201cec04ea517a693104d 224 Gene3D G3DSA:1.10.8.60 158 224 7.8E-14 T 11-10-2018 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 SUPERFAMILY SSF53335 5 306 2.33E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 6 307 35.631 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 Pfam PF01795 MraW methylase family 5 306 4.3E-106 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 PIRSF PIRSF004486 2 307 1.8E-104 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 SUPERFAMILY SSF81799 114 212 1.11E-33 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 306 5.5E-113 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 Gene3D G3DSA:1.10.150.170 112 213 3.8E-102 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Rmag_0298 a7c88c219da85667bb9ee0f8b78fb889 307 Gene3D G3DSA:3.40.50.150 9 306 3.8E-102 T 11-10-2018 Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 Pfam PF01022 Bacterial regulatory protein, arsR family 25 71 1.5E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 SUPERFAMILY SSF46785 11 97 7.68E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 Gene3D G3DSA:1.10.10.10 3 98 2.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 SMART SM00418 18 96 1.3E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 1.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 1.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Rmag_0618 5936bf69cdf525ed3ba49269005ad7d7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 1.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 Pfam PF00005 ABC transporter 18 184 1.2E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 Pfam PF12848 ABC transporter 224 300 5.9E-19 T 11-10-2018 IPR032781 ABC-transporter extension domain Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 Gene3D G3DSA:3.40.50.300 2 280 1.2E-52 T 11-10-2018 Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 SUPERFAMILY SSF52540 298 532 1.78E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 SUPERFAMILY SSF52540 4 239 3.1E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 SMART SM00382 353 520 5.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 SMART SM00382 26 226 4.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 Gene3D G3DSA:3.40.50.300 285 537 6.8E-54 T 11-10-2018 Rmag_0502 5e4833ebf181a00dc6d510dc54d2c6d5 537 Pfam PF00005 ABC transporter 344 476 8.2E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0604 23676cdde7e370722e1266310211687e 464 SUPERFAMILY SSF47364 1 93 3.01E-22 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 2.6E-167 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Rmag_0604 23676cdde7e370722e1266310211687e 464 SMART SM00382 99 251 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0604 23676cdde7e370722e1266310211687e 464 Gene3D G3DSA:1.20.120.140 4 305 7.0E-120 T 11-10-2018 Rmag_0604 23676cdde7e370722e1266310211687e 464 Pfam PF02978 Signal peptide binding domain 327 427 8.7E-29 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 SMART SM00963 1 86 2.0E-26 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 4.2E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 457 32.66 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-16 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 Gene3D G3DSA:3.40.50.300 90 285 7.0E-120 T 11-10-2018 Rmag_0604 23676cdde7e370722e1266310211687e 464 SUPERFAMILY SSF47446 298 428 3.4E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 Gene3D G3DSA:1.10.260.30 327 451 6.9E-34 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 SMART SM00962 100 296 8.5E-116 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0604 23676cdde7e370722e1266310211687e 464 SUPERFAMILY SSF52540 91 298 1.78E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 SMART SM01086 647 736 1.5E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Gene3D G3DSA:3.40.50.300 149 344 1.4E-57 T 11-10-2018 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 SUPERFAMILY SSF52540 431 734 2.63E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 527 545 2.8E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 556 574 2.8E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 603 2.8E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 485 503 2.8E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Gene3D G3DSA:1.10.8.60 647 740 1.1E-24 T 11-10-2018 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 728 5.0E-301 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 59 2.0E-5 T 11-10-2018 IPR004176 Clp, N-terminal Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Pfam PF07724 AAA domain (Cdc48 subfamily) 480 640 8.5E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Gene3D G3DSA:1.10.8.60 345 432 3.6E-31 T 11-10-2018 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 SMART SM00382 200 344 2.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 SMART SM00382 481 648 2.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 512 530 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Gene3D G3DSA:3.40.50.300 433 646 8.2E-77 T 11-10-2018 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 SUPERFAMILY SSF52540 166 421 2.54E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 307 3.9E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 SUPERFAMILY SSF81923 1 138 1.14E-42 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 647 726 5.1E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Rmag_0911 e349d0e8ca4b359e713c987258b7a4f2 740 Gene3D G3DSA:1.10.1780.10 1 141 4.0E-24 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 Pfam PF09179 TilS substrate binding domain 242 305 1.5E-11 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 SMART SM00977 330 389 3.0E-11 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 SUPERFAMILY SSF82829 229 309 9.15E-19 T 11-10-2018 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 Gene3D G3DSA:1.20.59.20 226 309 2.7E-13 T 11-10-2018 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 Pfam PF01171 PP-loop family 15 187 3.0E-51 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 192 3.2E-52 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 SUPERFAMILY SSF52402 4 221 1.56E-52 T 11-10-2018 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 331 369 2.2E-15 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 297 21.713 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 Gene3D G3DSA:3.40.50.620 2 222 1.4E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 Pfam PF11734 TilS substrate C-terminal domain 331 385 3.6E-15 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Rmag_0122 2b3c6f7c93859da0a717a297eca8a040 390 SUPERFAMILY SSF56037 328 384 2.07E-15 T 11-10-2018 Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 SUPERFAMILY SSF49503 44 174 4.29E-24 T 11-10-2018 IPR008972 Cupredoxin Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 Pfam PF07732 Multicopper oxidase 67 175 2.2E-24 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 ProSitePatterns PS00080 Multicopper oxidases signature 2. 520 531 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 Pfam PF07731 Multicopper oxidase 421 539 1.2E-27 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 Gene3D G3DSA:2.60.40.420 369 552 9.6E-43 T 11-10-2018 IPR008972 Cupredoxin Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 Gene3D G3DSA:2.60.40.420 173 327 1.4E-46 T 11-10-2018 IPR008972 Cupredoxin Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 Gene3D G3DSA:2.60.40.420 36 172 6.3E-36 T 11-10-2018 IPR008972 Cupredoxin Rmag_0708 bf17408f0fc5eea95227477aa0b3cdfa 565 SUPERFAMILY SSF49503 181 540 3.93E-37 T 11-10-2018 IPR008972 Cupredoxin Rmag_0199 5c5b8d60293410c80b18c945e8db0d20 824 TIGRFAM TIGR03623 TIGR03623: probable DNA repair protein 15 822 1.1E-133 T 11-10-2018 IPR019925 DNA repair protein, predicted Rmag_0199 5c5b8d60293410c80b18c945e8db0d20 824 Gene3D G3DSA:3.90.320.10 565 815 4.3E-6 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Rmag_0199 5c5b8d60293410c80b18c945e8db0d20 824 SUPERFAMILY SSF52540 188 527 7.83E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0199 5c5b8d60293410c80b18c945e8db0d20 824 Pfam PF12705 PD-(D/E)XK nuclease superfamily 568 821 6.5E-18 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 1.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 1.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 1.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 1.2E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 Gene3D G3DSA:3.40.50.1370 25 313 5.1E-85 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 SUPERFAMILY SSF53671 20 318 2.49E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 Gene3D G3DSA:3.40.50.1370 149 296 5.1E-85 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 5.6E-26 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 274 279 5.6E-26 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 92 101 5.6E-26 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 54 76 5.6E-26 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 233 242 5.6E-26 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 298 312 5.6E-26 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 319 37.383 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 20 161 1.2E-32 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 20 317 6.4E-86 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0045 fa62dfc29d4933e5c42ef80f0e855d8d 320 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 169 314 6.0E-26 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Gene3D G3DSA:4.10.860.10 199 235 6.2E-6 T 11-10-2018 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 4 573 2.2E-177 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 SUPERFAMILY SSF47781 508 591 2.26E-17 T 11-10-2018 IPR010994 RuvA domain 2-like Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 591 26.561 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 SUPERFAMILY SSF82771 13 96 2.88E-22 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Gene3D G3DSA:3.30.420.340 362 535 1.4E-48 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Gene3D G3DSA:3.40.1440.10 1 98 2.2E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 SMART SM00465 13 94 7.5E-22 T 11-10-2018 IPR000305 GIY-YIG endonuclease Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 370 526 3.5E-49 T 11-10-2018 IPR001162 UvrC family homology region Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Pfam PF01541 GIY-YIG catalytic domain 14 89 1.1E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Gene3D G3DSA:1.10.150.20 539 594 9.2E-20 T 11-10-2018 Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 SUPERFAMILY SSF46600 190 237 3.4E-11 T 11-10-2018 IPR036876 UVR domain superfamily Rmag_0598 0f5a6a5b10bf0b5f4094cbd327237bb5 594 Pfam PF02151 UvrB/uvrC motif 201 232 7.9E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 415 3.2E-116 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Gene3D G3DSA:3.90.190.20 292 415 1.5E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 SUPERFAMILY SSF63418 8 95 2.75E-22 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Pfam PF08245 Mur ligase middle domain 104 271 2.6E-35 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Pfam PF02875 Mur ligase family, glutamate ligase domain 294 364 1.9E-16 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 SUPERFAMILY SSF53244 294 415 7.33E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Gene3D G3DSA:3.40.1390.10 2 79 7.3E-20 T 11-10-2018 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 SUPERFAMILY SSF53623 99 287 3.66E-45 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Gene3D G3DSA:3.40.1190.10 80 289 5.9E-60 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 416 29.305 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0153 723226d08bee77f79edba8332ef38b50 417 Pfam PF01225 Mur ligase family, catalytic domain 26 72 4.2E-7 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SUPERFAMILY SSF55681 460 672 1.94E-43 T 11-10-2018 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SUPERFAMILY SSF54991 682 780 6.8E-24 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Gene3D G3DSA:3.30.56.10 6 174 5.7E-68 T 11-10-2018 Rmag_0642 85feb03926580d11e60d5599182c4264 780 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 780 3.6E-250 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Gene3D G3DSA:2.40.50.140 39 147 5.7E-68 T 11-10-2018 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Pfam PF01588 Putative tRNA binding domain 45 138 3.0E-22 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Gene3D G3DSA:3.30.930.10 488 673 5.3E-54 T 11-10-2018 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Gene3D G3DSA:3.30.70.380 688 780 1.6E-21 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Pfam PF03483 B3/4 domain 204 377 1.3E-62 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Pfam PF03147 Ferredoxin-fold anticodon binding domain 687 780 9.6E-24 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SMART SM00874 395 464 6.9E-24 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 774 42.63 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SMART SM00873 204 377 4.9E-82 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SMART SM00896 687 780 9.4E-32 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SUPERFAMILY SSF56037 192 387 2.38E-64 T 11-10-2018 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Pfam PF03484 tRNA synthetase B5 domain 398 464 4.4E-19 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Gene3D G3DSA:3.30.56.10 393 468 5.0E-22 T 11-10-2018 Rmag_0642 85feb03926580d11e60d5599182c4264 780 Gene3D G3DSA:3.50.40.10 192 386 3.9E-68 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Rmag_0642 85feb03926580d11e60d5599182c4264 780 SUPERFAMILY SSF46955 395 468 2.93E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Rmag_0642 85feb03926580d11e60d5599182c4264 780 SUPERFAMILY SSF50249 38 185 3.18E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-71 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 5.6E-33 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.32 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SUPERFAMILY SSF56059 128 401 9.19E-108 T 11-10-2018 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 432 547 2.1E-36 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 7.1E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Gene3D G3DSA:3.40.50.20 554 662 2.9E-47 T 11-10-2018 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Gene3D G3DSA:3.40.50.20 1 116 1.1E-49 T 11-10-2018 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SUPERFAMILY SSF56059 673 933 4.24E-102 T 11-10-2018 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SUPERFAMILY SSF52440 556 675 7.19E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Gene3D G3DSA:3.30.470.20 119 403 2.4E-127 T 11-10-2018 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SMART SM00851 955 1041 1.2E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Pfam PF02142 MGS-like domain 955 1041 1.3E-14 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SMART SM01096 424 547 4.7E-66 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Gene3D G3DSA:1.10.1030.10 404 553 3.1E-45 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SUPERFAMILY SSF48108 396 554 2.62E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SUPERFAMILY SSF52335 935 1068 2.49E-33 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Gene3D G3DSA:3.30.470.20 665 935 4.6E-116 T 11-10-2018 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.023 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 Gene3D G3DSA:3.40.50.1380 936 1069 2.7E-30 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Rmag_0875 eb1dbba18e56732475b65bf52e07edab 1069 SUPERFAMILY SSF52440 1 127 1.12E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_0912 ef97573dc1267ffa54520b0935d06353 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 14 92 1.9E-30 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Rmag_0912 ef97573dc1267ffa54520b0935d06353 99 Gene3D G3DSA:3.30.1390.10 2 98 1.3E-36 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rmag_0912 ef97573dc1267ffa54520b0935d06353 99 SUPERFAMILY SSF54736 12 95 1.05E-27 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rmag_0912 ef97573dc1267ffa54520b0935d06353 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 92 24.986 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 Gene3D G3DSA:1.20.1280.70 355 414 1.0E-20 T 11-10-2018 Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 Gene3D G3DSA:3.30.420.10 1 194 2.4E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 Pfam PF08411 Exonuclease C-terminal 205 467 4.7E-70 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 SMART SM00479 3 196 1.4E-4 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 SUPERFAMILY SSF53098 1 468 5.06E-114 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 Gene3D G3DSA:2.30.30.450 207 344 7.0E-31 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 Pfam PF00929 Exonuclease 6 186 8.6E-25 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0946 10ade37e75de95d5eac43ca73b3dba92 471 PIRSF PIRSF000977 1 470 4.7E-168 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 Rmag_0996 b3b54a9018d7ce03abfde211604fd448 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 247 2.8E-17 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Rmag_0996 b3b54a9018d7ce03abfde211604fd448 256 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 254 2.1E-76 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Rmag_0996 b3b54a9018d7ce03abfde211604fd448 256 SUPERFAMILY SSF56219 3 255 9.42E-70 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Rmag_0996 b3b54a9018d7ce03abfde211604fd448 256 Gene3D G3DSA:3.60.10.10 2 255 3.2E-83 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Rmag_0996 b3b54a9018d7ce03abfde211604fd448 256 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 252 4.3E-75 T 11-10-2018 Rmag_0996 b3b54a9018d7ce03abfde211604fd448 256 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Rmag_0850 d961d9cfcfd8ba78838bfd78caa2bca8 72 Gene3D G3DSA:2.40.50.140 1 72 1.5E-36 T 11-10-2018 Rmag_0850 d961d9cfcfd8ba78838bfd78caa2bca8 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.4E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Rmag_0850 d961d9cfcfd8ba78838bfd78caa2bca8 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.316 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Rmag_0850 d961d9cfcfd8ba78838bfd78caa2bca8 72 SUPERFAMILY SSF50249 1 71 1.18E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0850 d961d9cfcfd8ba78838bfd78caa2bca8 72 SMART SM00316 4 72 4.6E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0850 d961d9cfcfd8ba78838bfd78caa2bca8 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 6.5E-36 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Rmag_0483 9f8e68a10744e62683d8c50531d6d922 314 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 225 313 1.1E-34 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Rmag_0483 9f8e68a10744e62683d8c50531d6d922 314 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.9E-32 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Rmag_0483 9f8e68a10744e62683d8c50531d6d922 314 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 314 2.1E-119 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Rmag_0483 9f8e68a10744e62683d8c50531d6d922 314 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 314 68.801 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Rmag_0483 9f8e68a10744e62683d8c50531d6d922 314 SUPERFAMILY SSF53901 4 313 5.14E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_0483 9f8e68a10744e62683d8c50531d6d922 314 Gene3D G3DSA:3.40.47.10 1 314 4.3E-123 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_0976 a00cd58f4f4636703affee4d2cff8b18 98 SUPERFAMILY SSF54285 1 75 7.98E-24 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Rmag_0976 a00cd58f4f4636703affee4d2cff8b18 98 Pfam PF03658 RnfH family Ubiquitin 1 83 6.4E-33 T 11-10-2018 IPR005346 RnfH protein Rmag_0976 a00cd58f4f4636703affee4d2cff8b18 98 Hamap MF_00460 Protein RnfH [rnfH]. 1 91 23.675 T 11-10-2018 IPR005346 RnfH protein Rmag_0976 a00cd58f4f4636703affee4d2cff8b18 98 Gene3D G3DSA:3.10.20.280 1 85 1.2E-29 T 11-10-2018 IPR037021 RnfH superfamily Rmag_0241 c83c45a91a824abbc6bc33adab3ca0eb 157 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 7.2E-55 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0241 c83c45a91a824abbc6bc33adab3ca0eb 157 SUPERFAMILY SSF52833 7 156 3.24E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0241 c83c45a91a824abbc6bc33adab3ca0eb 157 PIRSF PIRSF000216 3 157 5.7E-57 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0241 c83c45a91a824abbc6bc33adab3ca0eb 157 Gene3D G3DSA:3.40.30.10 75 157 1.1E-27 T 11-10-2018 Rmag_0241 c83c45a91a824abbc6bc33adab3ca0eb 157 Gene3D G3DSA:1.10.10.1590 4 73 6.4E-19 T 11-10-2018 Rmag_0241 c83c45a91a824abbc6bc33adab3ca0eb 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 157 4.6E-51 T 11-10-2018 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 SUPERFAMILY SSF51230 93 171 1.44E-18 T 11-10-2018 IPR011053 Single hybrid motif Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 SUPERFAMILY SSF51230 3 89 1.57E-19 T 11-10-2018 IPR011053 Single hybrid motif Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Gene3D G3DSA:4.10.320.10 215 257 1.2E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Pfam PF00364 Biotin-requiring enzyme 6 75 4.6E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Pfam PF00364 Biotin-requiring enzyme 99 169 7.7E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 278 499 3.0E-70 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 SUPERFAMILY SSF52777 267 498 7.56E-72 T 11-10-2018 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 SUPERFAMILY SSF47005 211 254 4.97E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Pfam PF02817 e3 binding domain 215 248 1.3E-12 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Gene3D G3DSA:3.30.559.10 262 502 2.6E-82 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Gene3D G3DSA:2.40.50.100 95 173 7.4E-18 T 11-10-2018 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 Gene3D G3DSA:2.40.50.100 3 81 9.7E-18 T 11-10-2018 Rmag_0962 9e0d83b1596bfa815f5ee12e9224b0a2 502 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 120 149 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 913 15.792 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Gene3D G3DSA:1.10.287.380 841 913 5.3E-15 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Gene3D G3DSA:3.40.50.620 303 524 2.1E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 599 1.4E-211 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 SUPERFAMILY SSF52374 1 610 3.18E-130 T 11-10-2018 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Gene3D G3DSA:3.90.740.10 237 281 4.5E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 SUPERFAMILY SSF47323 611 863 8.04E-58 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 851 912 9.2E-13 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 894 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 SUPERFAMILY SSF50677 191 341 7.19E-63 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 SUPERFAMILY SSF46589 848 912 3.98E-11 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Pfam PF08264 Anticodon-binding domain of tRNA 640 786 3.6E-36 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 PRINTS PR00986 Valyl-tRNA synthetase signature 346 359 4.0E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.0E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 PRINTS PR00986 Valyl-tRNA synthetase signature 444 465 4.0E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 PRINTS PR00986 Valyl-tRNA synthetase signature 230 247 4.0E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 PRINTS PR00986 Valyl-tRNA synthetase signature 475 493 4.0E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Gene3D G3DSA:3.40.50.620 2 216 7.0E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0464 e2637b767aa7b63d581bcbba2585c644 915 Gene3D G3DSA:1.10.730.10 545 781 8.7E-68 T 11-10-2018 Rmag_1009 8f60a00f8273d751fcb6b14f60cb6027 95 SUPERFAMILY SSF52821 6 86 5.24E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_1009 8f60a00f8273d751fcb6b14f60cb6027 95 SMART SM00450 4 95 3.1E-7 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_1009 8f60a00f8273d751fcb6b14f60cb6027 95 Pfam PF00581 Rhodanese-like domain 14 92 2.6E-11 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_1009 8f60a00f8273d751fcb6b14f60cb6027 95 Gene3D G3DSA:3.40.250.10 3 91 2.1E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 SUPERFAMILY SSF53671 2 299 6.94E-100 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 296 1.9E-50 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 298 1.3E-112 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 4.0E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 286 4.0E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 251 260 4.0E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 4.0E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 Gene3D G3DSA:3.40.50.1370 133 285 2.1E-112 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 143 1.6E-49 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 6.8E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 277 288 6.8E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 215 225 6.8E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 6.8E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 6.8E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 299 76.029 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 Gene3D G3DSA:3.40.50.1370 11 294 2.1E-112 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Rmag_0452 f24a1551fab4c0e48bdd82d0da738716 299 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Rmag_0690 357f9cdc7a03bddae7ed4177f88a4a44 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 7 193 27.443 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Rmag_0690 357f9cdc7a03bddae7ed4177f88a4a44 194 Pfam PF12804 MobA-like NTP transferase domain 11 159 1.4E-28 T 11-10-2018 IPR025877 MobA-like NTP transferase Rmag_0690 357f9cdc7a03bddae7ed4177f88a4a44 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 9 190 1.4E-63 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Rmag_0690 357f9cdc7a03bddae7ed4177f88a4a44 194 SUPERFAMILY SSF53448 8 192 2.25E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0690 357f9cdc7a03bddae7ed4177f88a4a44 194 Gene3D G3DSA:3.90.550.10 5 194 1.4E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 Gene3D G3DSA:3.90.700.10 234 344 7.5E-147 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 PIRSF PIRSF000171 306 525 4.8E-14 T 11-10-2018 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 PIRSF PIRSF000171 1 281 6.3E-24 T 11-10-2018 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 Gene3D G3DSA:1.20.58.100 410 524 2.4E-36 T 11-10-2018 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 SUPERFAMILY SSF51905 3 433 5.71E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 SUPERFAMILY SSF56425 224 339 2.99E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 Gene3D G3DSA:3.50.50.60 8 390 7.5E-147 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.5E-8 T 11-10-2018 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 341 363 6.5E-8 T 11-10-2018 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 SUPERFAMILY SSF46977 414 510 3.92E-29 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 Pfam PF00890 FAD binding domain 8 378 8.3E-92 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 Pfam PF02910 Fumarate reductase flavoprotein C-term 427 509 7.2E-14 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Rmag_0966 94614a7d80dd43076a1a4500d8975cb1 527 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 505 1.2E-180 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 Gene3D G3DSA:3.90.640.10 186 259 2.1E-121 T 11-10-2018 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 Gene3D G3DSA:3.30.420.40 11 324 2.1E-121 T 11-10-2018 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 48 66 1.8E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 300 326 1.8E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 187 207 1.8E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 68 91 1.8E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 132 151 1.8E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 Gene3D G3DSA:3.30.420.40 154 317 2.1E-121 T 11-10-2018 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 Pfam PF06723 MreB/Mbl protein 9 335 1.6E-136 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 8 335 1.7E-143 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 SUPERFAMILY SSF53067 9 148 4.21E-34 T 11-10-2018 Rmag_0794 6a88d383d0a83e1b5922ec8246e76293 343 SUPERFAMILY SSF53067 151 335 5.44E-46 T 11-10-2018 Rmag_0141 b2967c150f861675075a7b6464b99965 497 SUPERFAMILY SSF142019 87 293 1.06E-51 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0141 b2967c150f861675075a7b6464b99965 497 Gene3D G3DSA:1.10.1060.10 350 428 6.4E-10 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0141 b2967c150f861675075a7b6464b99965 497 Pfam PF13237 4Fe-4S dicluster domain 359 411 3.1E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0141 b2967c150f861675075a7b6464b99965 497 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 130 272 1.1E-43 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0141 b2967c150f861675075a7b6464b99965 497 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 400 411 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0141 b2967c150f861675075a7b6464b99965 497 SUPERFAMILY SSF46548 358 421 3.4E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0141 b2967c150f861675075a7b6464b99965 497 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 361 372 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0141 b2967c150f861675075a7b6464b99965 497 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 6 428 7.4E-134 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Rmag_0141 b2967c150f861675075a7b6464b99965 497 Gene3D G3DSA:3.40.50.11540 135 251 1.2E-14 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0141 b2967c150f861675075a7b6464b99965 497 SUPERFAMILY SSF142984 284 350 5.75E-7 T 11-10-2018 Rmag_0141 b2967c150f861675075a7b6464b99965 497 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 105 1.3E-28 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Rmag_0141 b2967c150f861675075a7b6464b99965 497 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 497 133.514 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 SUPERFAMILY SSF161111 13 213 9.94E-55 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 Gene3D G3DSA:1.20.1510.10 15 212 9.2E-62 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 SUPERFAMILY SSF160240 216 295 2.62E-15 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 Pfam PF16916 Dimerisation domain of Zinc Transporter 217 292 1.3E-17 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 294 3.3E-70 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 Gene3D G3DSA:3.30.70.1350 213 294 4.4E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Rmag_0714 2507c47234b01cc7775bbfd5f210e211 384 Pfam PF01545 Cation efflux family 22 212 4.2E-46 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Rmag_0181 597fefcb43195ec07a4f531c3d5f1f5e 115 SUPERFAMILY SSF53137 5 113 6.76E-43 T 11-10-2018 Rmag_0181 597fefcb43195ec07a4f531c3d5f1f5e 115 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 115 6.5E-37 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0181 597fefcb43195ec07a4f531c3d5f1f5e 115 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 115 6.9E-37 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0181 597fefcb43195ec07a4f531c3d5f1f5e 115 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 115 24.205 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0181 597fefcb43195ec07a4f531c3d5f1f5e 115 Gene3D G3DSA:3.30.420.100 3 115 1.1E-37 T 11-10-2018 Rmag_0517 04c72bdf3618b0401efe03098ded018e 222 SUPERFAMILY SSF48452 88 208 6.07E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0517 04c72bdf3618b0401efe03098ded018e 222 Gene3D G3DSA:1.25.40.10 92 214 6.3E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0517 04c72bdf3618b0401efe03098ded018e 222 Pfam PF13525 Outer membrane lipoprotein 90 180 1.0E-8 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Gene3D G3DSA:3.30.230.70 235 551 1.5E-110 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SUPERFAMILY SSF55666 144 234 5.33E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 PIRSF PIRSF005499 1 695 1.6E-284 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Gene3D G3DSA:3.30.230.70 3 234 5.0E-80 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Gene3D G3DSA:2.40.50.140 623 692 4.2E-26 T 11-10-2018 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF00575 S1 RNA binding domain 620 689 3.7E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF01138 3' exoribonuclease family, domain 1 324 458 1.7E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 1.7E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SUPERFAMILY SSF55666 452 548 1.01E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SUPERFAMILY SSF54211 291 490 9.62E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF03725 3' exoribonuclease family, domain 2 461 531 2.3E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF03725 3' exoribonuclease family, domain 2 147 209 3.6E-11 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SUPERFAMILY SSF54791 550 637 6.9E-14 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SUPERFAMILY SSF54211 4 143 1.16E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SMART SM00316 621 690 6.8E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Gene3D G3DSA:3.30.1370.10 552 622 2.4E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF00013 KH domain 557 614 1.7E-7 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 693 29.453 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 9.5E-18 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SUPERFAMILY SSF50249 610 693 7.5E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0461 60af6a6b6a8679e0ac1c6a76a736e896 695 SMART SM00322 553 618 4.4E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Rmag_0824 b630c8aec348a33fbfa67c866d69c3f2 376 Gene3D G3DSA:3.50.50.100 1 376 4.8E-77 T 11-10-2018 Rmag_0824 b630c8aec348a33fbfa67c866d69c3f2 376 SUPERFAMILY SSF51905 113 245 4.23E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0824 b630c8aec348a33fbfa67c866d69c3f2 376 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 302 4.1E-20 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0824 b630c8aec348a33fbfa67c866d69c3f2 376 SUPERFAMILY SSF51905 2 318 4.69E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0645 3bd344a54269f21785f36dfef357d744 119 SUPERFAMILY SSF74731 3 117 3.14E-46 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.4E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 Pfam PF00453 Ribosomal protein L20 3 109 7.1E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.86 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 Gene3D G3DSA:1.10.720.90 2 55 5.2E-22 T 11-10-2018 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.0E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.0E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.0E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 28 72 3.0E-8 T 11-10-2018 Rmag_0645 3bd344a54269f21785f36dfef357d744 119 Gene3D G3DSA:1.10.1900.20 56 119 4.8E-25 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0956 c41f07aa2b2cd541febcff8296d63611 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 128 4.3E-25 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0956 c41f07aa2b2cd541febcff8296d63611 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 128 1.2E-23 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0956 c41f07aa2b2cd541febcff8296d63611 160 SUPERFAMILY SSF55083 1 147 3.66E-35 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0956 c41f07aa2b2cd541febcff8296d63611 160 Gene3D G3DSA:3.30.70.560 1 153 1.5E-32 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0845 8ef599d2ca0acc5bfbbf20ddc69382c3 226 SMART SM00382 33 221 6.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0845 8ef599d2ca0acc5bfbbf20ddc69382c3 226 Pfam PF00005 ABC transporter 24 172 8.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0845 8ef599d2ca0acc5bfbbf20ddc69382c3 226 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0845 8ef599d2ca0acc5bfbbf20ddc69382c3 226 SUPERFAMILY SSF52540 4 223 1.49E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0845 8ef599d2ca0acc5bfbbf20ddc69382c3 226 Gene3D G3DSA:3.40.50.300 1 224 2.6E-66 T 11-10-2018 Rmag_0265 fa3c85d23e036d833489b1b8adff202a 201 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 189 3.3E-66 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Rmag_0265 fa3c85d23e036d833489b1b8adff202a 201 Gene3D G3DSA:3.40.50.170 1 201 1.2E-74 T 11-10-2018 Rmag_0265 fa3c85d23e036d833489b1b8adff202a 201 SUPERFAMILY SSF53328 2 199 5.89E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0265 fa3c85d23e036d833489b1b8adff202a 201 Pfam PF00551 Formyl transferase 2 179 1.3E-55 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0265 fa3c85d23e036d833489b1b8adff202a 201 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0265 fa3c85d23e036d833489b1b8adff202a 201 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 185 28.329 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 Gene3D G3DSA:3.30.413.10 162 413 3.8E-88 T 11-10-2018 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 Gene3D G3DSA:3.30.70.2500 57 161 1.8E-35 T 11-10-2018 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 SUPERFAMILY SSF54862 225 296 6.91E-13 T 11-10-2018 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 Gene3D G3DSA:3.30.70.20 236 327 3.8E-88 T 11-10-2018 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 SUPERFAMILY SSF55124 5 163 1.57E-50 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 164 395 8.6E-29 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 10 430 1.9E-144 T 11-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 Rmag_0870 a14bb8574e24b2cc9be4a540e6ce65de 433 SUPERFAMILY SSF56014 166 427 4.65E-46 T 11-10-2018 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 SUPERFAMILY SSF52540 37 586 3.0E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 SUPERFAMILY SSF52540 3 414 3.97E-131 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Gene3D G3DSA:3.40.50.300 1 241 4.5E-74 T 11-10-2018 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 SMART SM00487 9 425 3.5E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 SMART SM00490 459 545 3.4E-19 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 658 41.835 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Pfam PF12344 Ultra-violet resistance protein B 551 592 1.2E-18 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Gene3D G3DSA:3.40.50.300 273 413 2.2E-50 T 11-10-2018 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Gene3D G3DSA:3.40.50.300 414 595 4.4E-49 T 11-10-2018 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Pfam PF00271 Helicase conserved C-terminal domain 438 543 2.1E-16 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Pfam PF02151 UvrB/uvrC motif 624 657 2.0E-4 T 11-10-2018 IPR001943 UVR domain GO:0005515 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Gene3D G3DSA:4.10.860.10 601 661 8.5E-13 T 11-10-2018 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 Pfam PF04851 Type III restriction enzyme, res subunit 13 139 4.5E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 656 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Rmag_0426 2f625146d3af5f40aac8e213011f1fba 664 SUPERFAMILY SSF46600 613 661 1.01E-8 T 11-10-2018 IPR036876 UVR domain superfamily Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 Gene3D G3DSA:3.40.190.10 95 264 1.9E-56 T 11-10-2018 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 SUPERFAMILY SSF48600 4 90 2.01E-16 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 242 264 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 SMART SM00830 10 91 2.7E-21 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 Gene3D G3DSA:3.40.190.10 173 255 1.9E-56 T 11-10-2018 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 PIRSF PIRSF001500 1 359 1.2E-126 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 81 1.7E-23 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 Gene3D G3DSA:3.30.70.260 269 358 1.0E-22 T 11-10-2018 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 Pfam PF00800 Prephenate dehydratase 93 267 6.1E-61 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 SUPERFAMILY SSF55021 261 356 2.56E-20 T 11-10-2018 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 Pfam PF01817 Chorismate mutase type II 10 89 4.7E-18 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 SUPERFAMILY SSF53850 92 274 6.62E-58 T 11-10-2018 Rmag_0626 7f2a222df20197c98738f5de87c653a4 359 Gene3D G3DSA:1.20.59.10 8 92 6.6E-25 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 Hamap MF_01151 Protein GrpE [grpE]. 4 180 18.684 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 SUPERFAMILY SSF58014 28 124 1.96E-25 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 PRINTS PR00773 GrpE protein signature 159 178 3.0E-20 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 PRINTS PR00773 GrpE protein signature 132 147 3.0E-20 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 PRINTS PR00773 GrpE protein signature 77 92 3.0E-20 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 PRINTS PR00773 GrpE protein signature 49 65 3.0E-20 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 Pfam PF01025 GrpE 19 180 3.4E-48 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 SUPERFAMILY SSF51064 125 180 2.88E-16 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 ProSitePatterns PS01071 grpE protein signature. 135 178 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 Gene3D G3DSA:2.30.22.10 124 180 3.4E-20 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Rmag_1055 fa68cf561fd98c74824b84bfe90d1cee 180 Gene3D G3DSA:3.90.20.20 17 123 1.3E-27 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Rmag_0983 202c6c3a365bbaa93dd1aef157db13eb 118 Gene3D G3DSA:1.10.3830.10 2 118 8.9E-36 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Rmag_0983 202c6c3a365bbaa93dd1aef157db13eb 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Rmag_0983 202c6c3a365bbaa93dd1aef157db13eb 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 2.8E-31 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Rmag_0316 30371040e73449c991c2cefa0f43120a 137 SMART SM00450 8 120 5.9E-8 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_0316 30371040e73449c991c2cefa0f43120a 137 Gene3D G3DSA:3.40.250.10 6 137 1.3E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_0316 30371040e73449c991c2cefa0f43120a 137 Pfam PF00581 Rhodanese-like domain 14 113 5.0E-6 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_0316 30371040e73449c991c2cefa0f43120a 137 SUPERFAMILY SSF52821 11 117 1.0E-14 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:2.40.270.10 796 838 1.2E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:2.40.270.10 1052 1260 2.8E-83 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:3.90.1110.10 319 447 2.4E-31 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF04561 RNA polymerase Rpb2, domain 2 360 460 1.6E-12 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 241 7.8E-8 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:2.40.50.100 720 794 1.0E-30 T 11-10-2018 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:3.90.1110.10 163 246 4.9E-27 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 SUPERFAMILY SSF64484 13 1358 0.0 T 11-10-2018 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF10385 RNA polymerase beta subunit external 1 domain 597 661 5.3E-16 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1360 12.007 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:3.90.1100.10 18 162 3.9E-50 T 11-10-2018 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:3.90.1100.10 648 719 3.3E-20 T 11-10-2018 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF04565 RNA polymerase Rpb2, domain 3 519 586 7.7E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1282 1.4E-159 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1357 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF04560 RNA polymerase Rpb2, domain 7 1284 1358 4.4E-26 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:3.90.1800.10 1270 1320 4.7E-10 T 11-10-2018 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Pfam PF04563 RNA polymerase beta subunit 27 505 1.1E-36 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:3.90.1100.10 448 631 5.3E-67 T 11-10-2018 Rmag_0811 1751f58b0355d3c8e11c5975ab002a39 1360 Gene3D G3DSA:2.40.50.150 839 957 1.2E-39 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 Gene3D G3DSA:2.60.40.420 100 236 5.9E-79 T 11-10-2018 IPR008972 Cupredoxin Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 SUPERFAMILY SSF81464 9 98 3.92E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 Gene3D G3DSA:1.10.287.90 28 99 5.9E-79 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 SUPERFAMILY SSF46626 250 339 1.92E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 18 236 3.0E-56 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 SUPERFAMILY SSF49503 97 291 2.13E-52 T 11-10-2018 IPR008972 Cupredoxin Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 Gene3D G3DSA:1.10.760.10 240 355 2.0E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 260 333 1.1E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 104 227 5.7E-38 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 147 168 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 171 191 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 66 78 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 78 98 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 191 208 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 100 119 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 209 226 2.8E-39 T 11-10-2018 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 8 89 3.5E-11 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0034 6ab2a4bbc727999e236043581ed63917 355 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 172 220 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 SUPERFAMILY SSF50447 28 115 1.31E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 Gene3D G3DSA:2.30.30.240 116 189 4.0E-22 T 11-10-2018 Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 SUPERFAMILY SSF50346 121 189 6.28E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 Gene3D G3DSA:2.40.30.60 19 115 1.1E-28 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 Pfam PF05239 PRC-barrel domain 119 184 1.3E-6 T 11-10-2018 IPR027275 PRC-barrel domain Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 28 189 21.249 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 Pfam PF01782 RimM N-terminal domain 31 112 2.2E-17 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 Rmag_0989 126ef028de90b121bdc8952e3ff9399e 189 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 29 188 9.4E-45 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 Gene3D G3DSA:3.50.50.60 118 243 3.1E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 SUPERFAMILY SSF51905 1 311 7.5E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 312 3.3E-114 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.5E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 Gene3D G3DSA:3.50.50.60 9 310 3.1E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.5E-40 T 11-10-2018 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.5E-40 T 11-10-2018 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.5E-40 T 11-10-2018 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.5E-40 T 11-10-2018 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.5E-40 T 11-10-2018 Rmag_0044 e474382816f819857d4dc5b5a7ff9f92 314 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 7.9E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0865 4f344fc83f9aea17828a9690356a9f45 107 PIRSF PIRSF006223 2 107 1.7E-41 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0865 4f344fc83f9aea17828a9690356a9f45 107 Gene3D G3DSA:3.30.1420.10 7 35 1.1E-8 T 11-10-2018 Rmag_0865 4f344fc83f9aea17828a9690356a9f45 107 Pfam PF04358 DsrC like protein 8 107 3.4E-43 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0865 4f344fc83f9aea17828a9690356a9f45 107 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 8 107 3.1E-46 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0865 4f344fc83f9aea17828a9690356a9f45 107 SUPERFAMILY SSF69721 7 107 1.44E-38 T 11-10-2018 IPR025526 DsrC-like domain superfamily Rmag_0865 4f344fc83f9aea17828a9690356a9f45 107 Gene3D G3DSA:1.10.10.370 37 107 8.5E-34 T 11-10-2018 Rmag_0694 3bc1d607d47a6d7449fdfa2e0f2a9dcc 78 SUPERFAMILY SSF54285 1 78 1.01E-16 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Rmag_0694 3bc1d607d47a6d7449fdfa2e0f2a9dcc 78 Gene3D G3DSA:3.10.20.30 1 78 9.0E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0694 3bc1d607d47a6d7449fdfa2e0f2a9dcc 78 Pfam PF02597 ThiS family 3 78 2.3E-14 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Rmag_0694 3bc1d607d47a6d7449fdfa2e0f2a9dcc 78 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 78 3.2E-20 T 11-10-2018 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 245 32.581 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 105 244 2.3E-38 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 102 1.1E-26 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 127 144 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 Gene3D G3DSA:3.40.50.720 3 244 5.6E-80 T 11-10-2018 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 44 245 1.0E-73 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 SUPERFAMILY SSF55347 104 213 1.57E-35 T 11-10-2018 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 SUPERFAMILY SSF51735 1 246 3.31E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 Gene3D G3DSA:3.30.360.10 104 211 5.6E-80 T 11-10-2018 Rmag_0828 35e352d42ded8a2893b5d86e7df9c04b 247 PIRSF PIRSF000161 1 247 2.8E-79 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 Gene3D G3DSA:1.20.1090.10 171 358 5.3E-56 T 11-10-2018 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 Pfam PF01761 3-dehydroquinate synthase 65 323 3.4E-101 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 3.0E-113 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 Gene3D G3DSA:3.40.50.1970 1 170 5.0E-66 T 11-10-2018 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 SUPERFAMILY SSF56796 6 354 1.22E-104 T 11-10-2018 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 65.268 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Rmag_0341 f9c0ff6e70879d88356f75cd121e4cd3 359 PIRSF PIRSF001455 4 357 1.1E-106 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 Pfam PF01668 SmpB protein 15 158 2.5E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 5.5E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 7.0E-43 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 SUPERFAMILY SSF74982 9 139 1.44E-49 T 11-10-2018 IPR023620 Small protein B Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 Gene3D G3DSA:2.40.280.10 7 135 1.3E-46 T 11-10-2018 IPR023620 Small protein B Rmag_0379 bb0311461715240be0eebf8a15bc3b64 165 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 69.218 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 SUPERFAMILY SSF81340 5 415 1.44E-74 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 Gene3D G3DSA:1.10.3080.10 12 422 5.3E-73 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 Pfam PF00654 Voltage gated chloride channel 62 402 4.1E-63 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 PRINTS PR00762 Chloride channel signature 75 92 1.7E-15 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 PRINTS PR00762 Chloride channel signature 109 128 1.7E-15 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 PRINTS PR00762 Chloride channel signature 370 389 1.7E-15 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Rmag_0773 92d42bf79b204b24af3e90569a8449c7 424 PRINTS PR00762 Chloride channel signature 161 180 1.7E-15 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Rmag_0488 cebbe410a8bfa1b98be56ce3d26f843c 211 Gene3D G3DSA:1.10.150.240 18 85 9.5E-50 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Rmag_0488 cebbe410a8bfa1b98be56ce3d26f843c 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 102 184 2.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Rmag_0488 cebbe410a8bfa1b98be56ce3d26f843c 211 Gene3D G3DSA:3.40.50.1000 6 191 9.5E-50 T 11-10-2018 IPR023214 HAD superfamily Rmag_0488 cebbe410a8bfa1b98be56ce3d26f843c 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 2.0E-33 T 11-10-2018 Rmag_0488 cebbe410a8bfa1b98be56ce3d26f843c 211 SUPERFAMILY SSF56784 1 211 6.27E-50 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0488 cebbe410a8bfa1b98be56ce3d26f843c 211 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 178 7.1E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 ProSitePatterns PS00534 Ferrochelatase signature. 200 219 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 Pfam PF00762 Ferrochelatase 9 330 6.2E-103 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 TIGRFAM TIGR00109 hemH: ferrochelatase 9 330 7.1E-94 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 Gene3D G3DSA:3.40.50.1400 174 312 7.5E-92 T 11-10-2018 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 Hamap MF_00323 Ferrochelatase [hemH]. 8 331 34.709 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 SUPERFAMILY SSF53800 8 331 1.83E-94 T 11-10-2018 Rmag_0522 799f04f0bcd39b2328b7bebcba6c1df8 331 Gene3D G3DSA:3.40.50.1400 9 331 7.5E-92 T 11-10-2018 Rmag_0025 390260271e996e4689c33d7364b0587a 383 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 378 43.854 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 378 3.0E-149 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 225 1.5E-38 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 PIRSF PIRSF006205 1 383 4.3E-148 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 373 1.2E-38 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 SUPERFAMILY SSF55347 123 260 7.19E-58 T 11-10-2018 Rmag_0025 390260271e996e4689c33d7364b0587a 383 Gene3D G3DSA:1.10.1740.10 298 382 2.2E-27 T 11-10-2018 Rmag_0025 390260271e996e4689c33d7364b0587a 383 Gene3D G3DSA:3.40.50.720 1 147 3.0E-47 T 11-10-2018 Rmag_0025 390260271e996e4689c33d7364b0587a 383 SUPERFAMILY SSF69055 289 381 2.88E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 6.0E-40 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Rmag_0025 390260271e996e4689c33d7364b0587a 383 SUPERFAMILY SSF51735 2 147 1.9E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0993 8d959c39b81a8440a55a6abb32acdb32 51 Gene3D G3DSA:2.20.28.120 1 51 1.4E-26 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0993 8d959c39b81a8440a55a6abb32acdb32 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.079 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0993 8d959c39b81a8440a55a6abb32acdb32 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0993 8d959c39b81a8440a55a6abb32acdb32 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 7.2E-23 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0993 8d959c39b81a8440a55a6abb32acdb32 51 Pfam PF00471 Ribosomal protein L33 3 49 1.1E-17 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0993 8d959c39b81a8440a55a6abb32acdb32 51 SUPERFAMILY SSF57829 1 49 2.81E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Rmag_0479 f8b8f59e5a0f98e8a4ab3c414d09f6c4 128 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 6 117 4.6E-49 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Rmag_0479 f8b8f59e5a0f98e8a4ab3c414d09f6c4 128 PIRSF PIRSF027377 1 125 3.8E-51 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Rmag_0479 f8b8f59e5a0f98e8a4ab3c414d09f6c4 128 Pfam PF14489 QueF-like protein 40 119 4.4E-29 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Rmag_0479 f8b8f59e5a0f98e8a4ab3c414d09f6c4 128 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 128 46.035 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Rmag_0479 f8b8f59e5a0f98e8a4ab3c414d09f6c4 128 SUPERFAMILY SSF55620 2 113 2.74E-26 T 11-10-2018 Rmag_0479 f8b8f59e5a0f98e8a4ab3c414d09f6c4 128 Gene3D G3DSA:3.30.1130.10 1 127 3.5E-41 T 11-10-2018 Rmag_1015 24d7aacdcfbeec1c6c5547bef93f7445 496 Pfam PF04262 Glutamate-cysteine ligase 1 359 3.0E-143 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Rmag_1015 24d7aacdcfbeec1c6c5547bef93f7445 496 Gene3D G3DSA:3.30.590.20 1 496 8.6E-180 T 11-10-2018 Rmag_1015 24d7aacdcfbeec1c6c5547bef93f7445 496 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 496 172.863 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Rmag_1015 24d7aacdcfbeec1c6c5547bef93f7445 496 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 2 491 6.8E-149 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Rmag_1015 24d7aacdcfbeec1c6c5547bef93f7445 496 SUPERFAMILY SSF55931 1 489 1.57E-164 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 626 1.1E-112 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 6.0E-93 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 629 2.3E-230 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 Pfam PF01578 Cytochrome C assembly protein 89 296 1.2E-52 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0272 9d956cbea71cf661d4e415b0fcb94901 634 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 619 632 1.5E-49 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 1.1E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 8.7E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 5.9E-242 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 SUPERFAMILY SSF52540 96 381 3.03E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Gene3D G3DSA:2.40.30.20 1 92 6.0E-34 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.739 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 7.0E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Gene3D G3DSA:1.20.150.20 383 513 1.9E-45 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 SUPERFAMILY SSF50615 10 93 1.65E-29 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 Gene3D G3DSA:3.40.50.300 94 382 3.5E-130 T 11-10-2018 Rmag_1047 2f5abb7b06e485daac1581ce68bd13a6 513 SUPERFAMILY SSF47917 384 511 2.33E-45 T 11-10-2018 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 SUPERFAMILY SSF81301 17 153 3.6E-39 T 11-10-2018 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 10 377 3.8E-121 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 Gene3D G3DSA:3.30.460.10 3 152 4.9E-54 T 11-10-2018 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 Pfam PF01743 Poly A polymerase head domain 33 154 4.9E-35 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 184 243 7.4E-16 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 379 30.414 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 379 5.5E-24 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 SUPERFAMILY SSF81891 157 355 1.83E-32 T 11-10-2018 Rmag_0480 37cf79c8e8585459a1a2f9b390fa35f4 379 Gene3D G3DSA:1.10.3090.10 155 379 4.4E-64 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 Gene3D G3DSA:3.50.50.60 7 329 7.7E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 449 3.4E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 324 8.3E-62 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 6.0E-39 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.0E-39 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 6.0E-39 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 6.0E-39 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 276 6.0E-39 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 Gene3D G3DSA:3.30.390.30 342 463 3.3E-39 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 SUPERFAMILY SSF51905 5 318 1.16E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 Gene3D G3DSA:3.50.50.60 149 270 7.7E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PIRSF PIRSF000350 3 462 1.0E-82 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 SUPERFAMILY SSF55424 342 460 6.53E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 457 1.0E-147 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 304 311 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 360 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 446 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 275 2.7E-71 T 11-10-2018 Rmag_0963 f8e2241befe65d255dcce3f400fd74a2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.7E-71 T 11-10-2018 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 SMART SM00861 303 466 9.2E-56 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 Gene3D G3DSA:3.40.50.920 478 600 3.2E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 ProSitePatterns PS00801 Transketolase signature 1. 27 46 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 273 6.4E-117 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 Gene3D G3DSA:3.40.50.970 300 473 2.6E-62 T 11-10-2018 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 SUPERFAMILY SSF52922 472 599 1.31E-29 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 600 41.872 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 ProSitePatterns PS00802 Transketolase signature 2. 409 425 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 SUPERFAMILY SSF52518 301 487 1.51E-51 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 SUPERFAMILY SSF52518 3 365 1.31E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 Pfam PF02779 Transketolase, pyrimidine binding domain 304 462 1.0E-32 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 Pfam PF02780 Transketolase, C-terminal domain 478 591 6.5E-25 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Rmag_0386 d995ab687cdcff6eac30380f2673ae19 600 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 3 594 7.7E-242 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 SUPERFAMILY SSF52540 1 570 4.97E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 923 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 SUPERFAMILY SSF52540 613 919 1.49E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Gene3D G3DSA:3.40.50.300 612 934 3.8E-139 T 11-10-2018 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Gene3D G3DSA:3.30.190.20 130 239 3.9E-237 T 11-10-2018 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Gene3D G3DSA:3.40.50.300 6 596 3.9E-237 T 11-10-2018 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Gene3D G3DSA:1.20.1580.10 691 828 3.8E-139 T 11-10-2018 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Gene3D G3DSA:1.20.1580.10 90 493 3.9E-237 T 11-10-2018 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Pfam PF00005 ABC transporter 622 858 4.7E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 938 22.086 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0263 40338ad4b36637ebf41aefbe0d0c6284 938 Gene3D G3DSA:1.10.8.280 288 404 3.9E-237 T 11-10-2018 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 Pfam PF00551 Formyl transferase 11 189 7.0E-46 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 Pfam PF02911 Formyl transferase, C-terminal domain 210 312 4.6E-26 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 Gene3D G3DSA:3.40.50.170 5 212 7.6E-77 T 11-10-2018 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 SUPERFAMILY SSF50486 211 315 2.98E-27 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 10 315 35.015 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 Gene3D G3DSA:3.10.25.10 213 317 2.1E-28 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 11 313 1.6E-93 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Rmag_0785 54e086b5856cef7ad60351e19fe81238 320 SUPERFAMILY SSF53328 9 210 2.88E-63 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Rmag_0935 acd5c7a0e1aaffa6dce1dc5ae6216f41 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Rmag_0935 acd5c7a0e1aaffa6dce1dc5ae6216f41 131 SUPERFAMILY SSF54211 7 131 3.79E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0935 acd5c7a0e1aaffa6dce1dc5ae6216f41 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 31.181 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Rmag_0935 acd5c7a0e1aaffa6dce1dc5ae6216f41 131 Gene3D G3DSA:3.30.230.10 2 131 5.5E-49 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0935 acd5c7a0e1aaffa6dce1dc5ae6216f41 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 8.0E-44 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 Pfam PF00772 DnaB-like helicase N terminal domain 9 110 2.2E-33 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 452 7.9E-161 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 SUPERFAMILY SSF48024 7 118 7.72E-35 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 SUPERFAMILY SSF52540 184 443 2.94E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 Gene3D G3DSA:3.40.50.300 165 456 4.5E-98 T 11-10-2018 Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 Pfam PF03796 DnaB-like helicase C terminal domain 186 450 1.5E-104 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Rmag_0667 4683fa1462ae48aaf8a5c37e5c069d22 481 Gene3D G3DSA:1.10.860.10 2 164 5.3E-49 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Rmag_0492 f2af5c5ca8bbb2a056933b1201411530 243 PIRSF PIRSF004808 3 242 3.8E-68 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Rmag_0492 f2af5c5ca8bbb2a056933b1201411530 243 Gene3D G3DSA:1.10.8.590 175 238 2.1E-20 T 11-10-2018 Rmag_0492 f2af5c5ca8bbb2a056933b1201411530 243 Gene3D G3DSA:3.40.1280.10 4 169 2.0E-54 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Rmag_0492 f2af5c5ca8bbb2a056933b1201411530 243 SUPERFAMILY SSF75217 5 169 6.54E-32 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Rmag_0492 f2af5c5ca8bbb2a056933b1201411530 243 Pfam PF00588 SpoU rRNA Methylase family 8 159 1.5E-30 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Rmag_0492 f2af5c5ca8bbb2a056933b1201411530 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 6 238 2.7E-62 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 5 228 2.7E-100 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 SUPERFAMILY SSF56808 6 225 1.83E-78 T 11-10-2018 IPR023674 Ribosomal protein L1-like Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.144 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 Gene3D G3DSA:3.30.190.20 21 225 1.4E-75 T 11-10-2018 Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 Gene3D G3DSA:3.40.50.790 68 159 1.4E-75 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 PIRSF PIRSF002155 1 227 4.5E-76 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0814 1517ebf7d796174f6b846bc5af824c43 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 8.6E-49 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Rmag_0724 23985e7eb3a867a2764604468843a223 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 145 1.2E-23 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Rmag_0724 23985e7eb3a867a2764604468843a223 150 TIGRFAM TIGR02801 tolR: protein TolR 14 145 4.1E-39 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Rmag_0724 23985e7eb3a867a2764604468843a223 150 Gene3D G3DSA:3.30.420.270 59 138 2.8E-14 T 11-10-2018 Rmag_0724 23985e7eb3a867a2764604468843a223 150 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 145 26.367 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Rmag_1041 0ec0582b757120ec9190fbb47f0976e9 286 SUPERFAMILY SSF51197 2 281 4.58E-36 T 11-10-2018 Rmag_1041 0ec0582b757120ec9190fbb47f0976e9 286 Gene3D G3DSA:3.60.130.10 13 285 3.8E-25 T 11-10-2018 Rmag_1041 0ec0582b757120ec9190fbb47f0976e9 286 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 278 5.0E-17 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Rmag_0312 571e407bcb8b74ac16408fd6d4a4d646 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 207 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Rmag_0312 571e407bcb8b74ac16408fd6d4a4d646 372 Gene3D G3DSA:3.40.640.10 20 268 2.8E-142 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0312 571e407bcb8b74ac16408fd6d4a4d646 372 Gene3D G3DSA:3.90.1150.10 7 367 2.8E-142 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0312 571e407bcb8b74ac16408fd6d4a4d646 372 SUPERFAMILY SSF53383 7 369 3.5E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0312 571e407bcb8b74ac16408fd6d4a4d646 372 Pfam PF00266 Aminotransferase class-V 15 355 4.7E-36 T 11-10-2018 IPR000192 Aminotransferase class V domain Rmag_0312 571e407bcb8b74ac16408fd6d4a4d646 372 PIRSF PIRSF000524 3 372 7.4E-114 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Rmag_0052 485c5836743b1269b230941a52a11aa9 154 Gene3D G3DSA:3.30.300.70 1 81 6.0E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Rmag_0052 485c5836743b1269b230941a52a11aa9 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 154 23.911 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Rmag_0052 485c5836743b1269b230941a52a11aa9 154 Pfam PF17384 RimP C-terminal SH3 domain 87 154 2.9E-12 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Rmag_0052 485c5836743b1269b230941a52a11aa9 154 SUPERFAMILY SSF74942 85 154 8.37E-15 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Rmag_0052 485c5836743b1269b230941a52a11aa9 154 Pfam PF02576 RimP N-terminal domain 11 84 7.0E-27 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Rmag_0052 485c5836743b1269b230941a52a11aa9 154 SUPERFAMILY SSF75420 3 84 6.54E-23 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Rmag_0572 a900de4f9f644f544a74562581e7b734 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Rmag_0572 a900de4f9f644f544a74562581e7b734 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 3.5E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Rmag_0572 a900de4f9f644f544a74562581e7b734 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 7.4E-51 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Rmag_0572 a900de4f9f644f544a74562581e7b734 112 Gene3D G3DSA:3.10.20.30 1 112 2.1E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0572 a900de4f9f644f544a74562581e7b734 112 PRINTS PR00355 Adrenodoxin signature 83 91 4.5E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Rmag_0572 a900de4f9f644f544a74562581e7b734 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.5E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Rmag_0572 a900de4f9f644f544a74562581e7b734 112 PRINTS PR00355 Adrenodoxin signature 60 74 4.5E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Rmag_0572 a900de4f9f644f544a74562581e7b734 112 SUPERFAMILY SSF54292 4 106 1.64E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Rmag_0008 8d45bc150eb7743c0d1a3448a00ab01d 209 Gene3D G3DSA:3.40.30.10 11 202 1.0E-56 T 11-10-2018 Rmag_0008 8d45bc150eb7743c0d1a3448a00ab01d 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 126 195 5.3E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Rmag_0008 8d45bc150eb7743c0d1a3448a00ab01d 209 SUPERFAMILY SSF52833 10 105 7.75E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0008 8d45bc150eb7743c0d1a3448a00ab01d 209 Gene3D G3DSA:1.20.1050.10 88 194 1.0E-56 T 11-10-2018 Rmag_0008 8d45bc150eb7743c0d1a3448a00ab01d 209 SUPERFAMILY SSF47616 81 205 3.41E-13 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Rmag_0008 8d45bc150eb7743c0d1a3448a00ab01d 209 Pfam PF13409 Glutathione S-transferase, N-terminal domain 21 80 7.6E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 47.991 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 Gene3D G3DSA:3.40.640.10 17 250 6.5E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 Pfam PF00266 Aminotransferase class-V 4 347 8.7E-52 T 11-10-2018 IPR000192 Aminotransferase class V domain Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 SUPERFAMILY SSF53383 1 357 4.26E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 Gene3D G3DSA:3.90.1150.10 251 359 5.3E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 5.0E-148 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Rmag_0628 73e1b55b4878619fa65f2b955a5fd80a 359 PIRSF PIRSF000525 1 359 1.7E-145 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 619 3.5E-23 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 SUPERFAMILY SSF54211 217 380 2.66E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Gene3D G3DSA:3.40.50.670 389 622 3.7E-89 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Gene3D G3DSA:3.30.565.10 1 214 1.1E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 SMART SM00387 26 172 5.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 627 45.736 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 SMART SM00433 33 623 4.4E-217 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 SUPERFAMILY SSF56719 387 620 3.4E-77 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Pfam PF01751 Toprim domain 412 520 1.7E-12 T 11-10-2018 IPR006171 TOPRIM domain Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Gene3D G3DSA:3.30.230.10 215 388 7.9E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 623 3.1E-289 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Pfam PF00204 DNA gyrase B 242 383 9.6E-38 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 SUPERFAMILY SSF55874 3 214 5.5E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 148 163 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 191 212 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 173 190 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 3.5E-90 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 413 427 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 30 45 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 496 513 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 561 577 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 516 528 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 108 122 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 478 494 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 65 78 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 PRINTS PR00418 DNA topoisomerase II family signature 265 278 8.4E-59 T 11-10-2018 Rmag_0563 39c0a9d96f3698db2a1e3c07f4e03f0f 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 169 3.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 SUPERFAMILY SSF52374 114 463 1.08E-86 T 11-10-2018 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 SUPERFAMILY SSF47323 447 567 1.05E-36 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 129 138 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 SMART SM01016 3 90 8.0E-28 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Gene3D G3DSA:3.30.1360.70 1 110 4.9E-20 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Pfam PF05746 DALR anticodon binding domain 452 567 2.3E-33 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 SMART SM00836 452 567 1.2E-49 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Gene3D G3DSA:3.40.50.620 119 446 5.1E-156 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 1.8E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 321 342 1.8E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 1.8E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 1.8E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 567 4.0E-133 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 567 25.97 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 1.7E-20 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 SUPERFAMILY SSF55190 26 110 4.84E-19 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Pfam PF00750 tRNA synthetases class I (R) 99 419 2.0E-24 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Rmag_0079 9324600adbe1780d1fdd940a49946f7b 567 Gene3D G3DSA:1.10.730.10 447 567 5.1E-156 T 11-10-2018 Rmag_0763 5418e92f419ee1ba47d37560f3845abf 102 Pfam PF01722 BolA-like protein 12 83 1.1E-26 T 11-10-2018 IPR002634 BolA protein Rmag_0763 5418e92f419ee1ba47d37560f3845abf 102 SUPERFAMILY SSF82657 2 87 5.23E-29 T 11-10-2018 IPR036065 BolA-like superfamily Rmag_0763 5418e92f419ee1ba47d37560f3845abf 102 PIRSF PIRSF003113 1 98 1.5E-34 T 11-10-2018 IPR002634 BolA protein Rmag_0763 5418e92f419ee1ba47d37560f3845abf 102 Gene3D G3DSA:3.10.20.90 1 89 6.7E-28 T 11-10-2018 Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 Gene3D G3DSA:3.40.50.1100 37 155 1.1E-103 T 11-10-2018 Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 Gene3D G3DSA:3.40.50.1100 9 290 1.1E-103 T 11-10-2018 Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 294 5.6E-138 T 11-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 283 1.1E-59 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 SUPERFAMILY SSF53686 5 294 1.44E-84 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Rmag_0772 923c7e0c4519b5e8b4a4e30afdcd332e 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 294 2.3E-117 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Rmag_0259 90450e91b513d0ac38e954f141b89553 318 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 10 318 44.423 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Rmag_0259 90450e91b513d0ac38e954f141b89553 318 Pfam PF08003 Protein of unknown function (DUF1698) 6 318 5.1E-98 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like Rmag_0259 90450e91b513d0ac38e954f141b89553 318 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 23 316 7.1E-107 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Rmag_0259 90450e91b513d0ac38e954f141b89553 318 Gene3D G3DSA:3.40.50.150 89 301 6.9E-21 T 11-10-2018 Rmag_0259 90450e91b513d0ac38e954f141b89553 318 SUPERFAMILY SSF53335 89 273 5.48E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0361 d770add63beb899c0772bdf52850c41b 720 Gene3D G3DSA:3.30.565.10 570 720 4.9E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SUPERFAMILY SSF47384 494 567 2.35E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SMART SM00387 610 720 3.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SUPERFAMILY SSF55874 566 716 6.55E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0361 d770add63beb899c0772bdf52850c41b 720 Gene3D G3DSA:1.20.1480.50 274 375 2.0E-10 T 11-10-2018 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 Gene3D G3DSA:1.10.287.130 494 568 1.9E-10 T 11-10-2018 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 679 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 698 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SUPERFAMILY SSF158472 318 367 6.02E-7 T 11-10-2018 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SMART SM00304 317 370 5.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 716 3.1E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0361 d770add63beb899c0772bdf52850c41b 720 PIRSF PIRSF037532 4 720 2.7E-158 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SUPERFAMILY SSF55785 388 496 5.23E-5 T 11-10-2018 IPR035965 PAS domain superfamily Rmag_0361 d770add63beb899c0772bdf52850c41b 720 Gene3D G3DSA:3.30.450.20 388 493 2.4E-11 T 11-10-2018 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 SMART SM00388 499 571 7.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Rmag_0361 d770add63beb899c0772bdf52850c41b 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 501 560 1.1E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Rmag_0371 0231028979f64e44503ae8676cdf3a8b 204 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 204 41.141 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Rmag_0371 0231028979f64e44503ae8676cdf3a8b 204 Gene3D G3DSA:3.20.19.10 1 178 5.7E-72 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Rmag_0371 0231028979f64e44503ae8676cdf3a8b 204 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 190 8.3E-76 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Rmag_0371 0231028979f64e44503ae8676cdf3a8b 204 SUPERFAMILY SSF52016 1 194 3.34E-61 T 11-10-2018 Rmag_0371 0231028979f64e44503ae8676cdf3a8b 204 Pfam PF00694 Aconitase C-terminal domain 1 132 4.0E-38 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Rmag_0863 2c3b2a7e37de515d0aa263276cc72a1d 518 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0863 2c3b2a7e37de515d0aa263276cc72a1d 518 Pfam PF13183 4Fe-4S dicluster domain 73 158 8.1E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0863 2c3b2a7e37de515d0aa263276cc72a1d 518 Pfam PF02754 Cysteine-rich domain 379 479 5.1E-4 T 11-10-2018 IPR004017 Cysteine-rich domain Rmag_0863 2c3b2a7e37de515d0aa263276cc72a1d 518 SUPERFAMILY SSF46548 65 170 9.94E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 Gene3D G3DSA:3.90.79.10 1 127 4.6E-32 T 11-10-2018 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 SUPERFAMILY SSF55811 3 124 2.17E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 Pfam PF00293 NUDIX domain 6 119 9.1E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 Gene3D G3DSA:3.20.20.70 128 307 1.3E-36 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 SUPERFAMILY SSF51391 115 307 1.31E-35 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 123 4.5E-32 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.2E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.2E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Rmag_1016 ead95059d925e3191f56a9393b23c0ca 307 Pfam PF02581 Thiamine monophosphate synthase 132 306 3.3E-32 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 SMART SM00332 3 227 2.7E-11 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 381 393 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 Gene3D G3DSA:3.30.200.20 252 341 6.6E-8 T 11-10-2018 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 SMART SM00220 262 530 1.9E-24 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 SMART SM00331 21 229 4.2E-9 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 Pfam PF00069 Protein kinase domain 276 479 3.6E-40 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 SUPERFAMILY SSF56112 246 523 1.62E-55 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 Gene3D G3DSA:1.10.510.10 343 527 3.3E-39 T 11-10-2018 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 Pfam PF13672 Protein phosphatase 2C 17 193 2.5E-14 T 11-10-2018 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 Gene3D G3DSA:3.60.40.10 2 232 1.8E-37 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Rmag_0686 f114c8347f706a2171103a5d9fe11860 566 SUPERFAMILY SSF81606 11 229 4.97E-44 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Rmag_0957 c7c01c134048f91fd5358bc5ae13866c 119 SUPERFAMILY SSF55620 1 116 1.72E-34 T 11-10-2018 Rmag_0957 c7c01c134048f91fd5358bc5ae13866c 119 SMART SM00905 4 114 2.8E-41 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Rmag_0957 c7c01c134048f91fd5358bc5ae13866c 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 101 3.9E-24 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Rmag_0957 c7c01c134048f91fd5358bc5ae13866c 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.0E-29 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Rmag_0957 c7c01c134048f91fd5358bc5ae13866c 119 Gene3D G3DSA:3.30.1130.10 1 117 1.4E-38 T 11-10-2018 Rmag_0957 c7c01c134048f91fd5358bc5ae13866c 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 1.3E-33 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Rmag_0101 a02a772eb6b975f243c11b4a0f583d8e 181 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Rmag_0101 a02a772eb6b975f243c11b4a0f583d8e 181 Gene3D G3DSA:3.90.79.10 5 181 1.3E-40 T 11-10-2018 Rmag_0101 a02a772eb6b975f243c11b4a0f583d8e 181 SUPERFAMILY SSF55811 7 176 9.48E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Rmag_0101 a02a772eb6b975f243c11b4a0f583d8e 181 Pfam PF00293 NUDIX domain 46 156 1.6E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 1.8E-65 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 SUPERFAMILY SSF47917 343 456 5.23E-53 T 11-10-2018 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 SUPERFAMILY SSF50615 1 73 3.92E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 Gene3D G3DSA:1.10.1140.10 343 458 4.7E-57 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 2.6E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 Gene3D G3DSA:2.40.10.170 1 73 4.8E-29 T 11-10-2018 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.169 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 456 3.1E-252 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 Gene3D G3DSA:3.40.50.300 74 342 8.8E-113 T 11-10-2018 Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 SUPERFAMILY SSF52540 75 346 4.14E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1045 2ab82fef253d144de5e5a4896346ab99 459 SMART SM00382 140 324 1.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 SUPERFAMILY SSF55920 156 403 1.7E-75 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 SUPERFAMILY SSF53092 2 152 1.49E-37 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 Pfam PF05195 Aminopeptidase P, N-terminal domain 3 114 5.8E-32 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 Pfam PF00557 Metallopeptidase family M24 159 381 6.6E-61 T 11-10-2018 IPR000994 Peptidase M24 Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 Gene3D G3DSA:3.90.230.10 150 404 1.1E-89 T 11-10-2018 Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 SMART SM01011 1 128 1.6E-36 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 318 330 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Rmag_0113 d86af1a1838a40b6eddbae1064c44319 404 Gene3D G3DSA:3.40.350.10 1 149 3.7E-41 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Rmag_0860 315a3362e9ceb2cc76284edf3d5c6c97 243 SUPERFAMILY SSF54862 45 224 2.26E-42 T 11-10-2018 Rmag_0860 315a3362e9ceb2cc76284edf3d5c6c97 243 Gene3D G3DSA:3.30.70.20 25 242 3.4E-49 T 11-10-2018 Rmag_0860 315a3362e9ceb2cc76284edf3d5c6c97 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0860 315a3362e9ceb2cc76284edf3d5c6c97 243 Pfam PF13247 4Fe-4S dicluster domain 106 208 4.4E-19 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0937 556abbbdac0ac97907869bcca1564785 531 SUPERFAMILY SSF53649 224 517 7.63E-18 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Rmag_0937 556abbbdac0ac97907869bcca1564785 531 Pfam PF08019 Domain of unknown function (DUF1705) 53 202 4.3E-44 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 Rmag_0937 556abbbdac0ac97907869bcca1564785 531 Gene3D G3DSA:3.40.720.10 210 530 1.1E-78 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Rmag_0937 556abbbdac0ac97907869bcca1564785 531 Pfam PF00884 Sulfatase 228 515 2.0E-41 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.5E-15 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 PRINTS PR00149 Fumarate lyase superfamily signature 293 309 1.5E-15 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 PRINTS PR00149 Fumarate lyase superfamily signature 162 180 1.5E-15 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 PRINTS PR00149 Fumarate lyase superfamily signature 250 277 1.5E-15 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 450 3.3E-125 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 Pfam PF08328 Adenylosuccinate lyase C-terminal 330 444 4.1E-48 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 Pfam PF00206 Lyase 14 311 7.1E-62 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 ProSitePatterns PS00163 Fumarate lyases signature. 293 302 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 Gene3D G3DSA:1.20.200.10 118 445 1.0E-148 T 11-10-2018 Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 Gene3D G3DSA:1.10.275.10 1 117 4.1E-45 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 Gene3D G3DSA:1.10.40.30 381 444 1.0E-148 T 11-10-2018 Rmag_0991 fccb0e58c5376aa5a338c77204c59a52 458 SUPERFAMILY SSF48557 10 454 2.2E-98 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Rmag_0890 e307f3f9d3b013344f9ade5682fedbe3 382 SUPERFAMILY SSF53756 46 380 4.71E-52 T 11-10-2018 Rmag_0890 e307f3f9d3b013344f9ade5682fedbe3 382 Pfam PF00534 Glycosyl transferases group 1 210 334 2.3E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Rmag_0890 e307f3f9d3b013344f9ade5682fedbe3 382 Gene3D G3DSA:3.40.50.2000 210 366 4.3E-29 T 11-10-2018 Rmag_0890 e307f3f9d3b013344f9ade5682fedbe3 382 Pfam PF13439 Glycosyltransferase Family 4 55 203 3.5E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 Gene3D G3DSA:3.10.310.10 5 267 2.1E-90 T 11-10-2018 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 269 7.2E-85 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 Pfam PF01678 Diaminopimelate epimerase 5 125 2.1E-31 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 Pfam PF01678 Diaminopimelate epimerase 150 263 1.1E-21 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 271 35.186 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 Gene3D G3DSA:3.10.310.10 117 258 2.1E-90 T 11-10-2018 Rmag_0550 9dc78b7e40ba6b8543a6ce0a9d4b2d9e 271 SUPERFAMILY SSF54506 3 270 2.44E-46 T 11-10-2018 Rmag_0448 950a5f25fa3bb104f4b96888263b6e48 248 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 75 2.1E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Rmag_0448 950a5f25fa3bb104f4b96888263b6e48 248 Gene3D G3DSA:1.20.120.1760 5 188 1.1E-16 T 11-10-2018 Rmag_0448 950a5f25fa3bb104f4b96888263b6e48 248 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 21 181 2.6E-37 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Rmag_0448 950a5f25fa3bb104f4b96888263b6e48 248 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 Gene3D G3DSA:3.40.50.10380 1 160 2.4E-68 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 SMART SM00919 163 399 7.7E-125 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 Pfam PF03949 Malic enzyme, NAD binding domain 165 356 1.2E-23 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 Gene3D G3DSA:3.40.50.720 161 406 2.5E-76 T 11-10-2018 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 Pfam PF00390 Malic enzyme, N-terminal domain 22 150 2.3E-29 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 PIRSF PIRSF000106 38 405 3.2E-67 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 SUPERFAMILY SSF51735 163 405 1.87E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 SMART SM01274 18 151 4.6E-82 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Rmag_0819 9162d239f31649dec85d68e4c55a1b50 406 SUPERFAMILY SSF53223 12 161 1.65E-53 T 11-10-2018 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SMART SM00487 596 785 2.7E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 36 1105 26.368 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:2.30.30.840 479 537 1.2E-225 T 11-10-2018 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:3.40.50.11140 353 449 9.2E-11 T 11-10-2018 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:3.40.50.300 475 985 1.2E-225 T 11-10-2018 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:3.90.1150.50 1000 1142 2.7E-39 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SUPERFAMILY SSF52540 778 986 3.59E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Pfam PF00270 DEAD/DEAH box helicase 601 761 5.4E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SMART SM01058 475 572 8.2E-44 T 11-10-2018 IPR003711 CarD-like/TRCF domain Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SUPERFAMILY SSF52540 520 779 5.87E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Pfam PF03461 TRCF domain 1008 1096 2.6E-25 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SMART SM00490 822 906 9.0E-20 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SUPERFAMILY SSF143517 995 1141 1.31E-39 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Pfam PF00271 Helicase conserved C-terminal domain 800 905 7.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SMART SM00982 1004 1104 1.2E-43 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Pfam PF02559 CarD-like/TRCF domain 477 571 4.1E-23 T 11-10-2018 IPR003711 CarD-like/TRCF domain Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 147 1077 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:3.30.2060.10 130 215 1.3E-98 T 11-10-2018 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:3.40.50.11180 25 331 1.3E-98 T 11-10-2018 Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SUPERFAMILY SSF52540 348 460 1.53E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SUPERFAMILY SSF141259 467 544 2.35E-21 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 SUPERFAMILY SSF52540 13 339 1.47E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1021 6fa02ec7171f4a3da89e0b4290c88d86 1142 Gene3D G3DSA:3.40.50.300 538 777 1.2E-225 T 11-10-2018 Rmag_0995 0282c3c1ae869b5ba9087ce1febe6bfb 212 Gene3D G3DSA:3.40.50.2020 1 212 5.7E-68 T 11-10-2018 Rmag_0995 0282c3c1ae869b5ba9087ce1febe6bfb 212 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 212 30.091 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0995 0282c3c1ae869b5ba9087ce1febe6bfb 212 Pfam PF00156 Phosphoribosyl transferase domain 59 162 3.8E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Rmag_0995 0282c3c1ae869b5ba9087ce1febe6bfb 212 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 187 2.1E-56 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0995 0282c3c1ae869b5ba9087ce1febe6bfb 212 SUPERFAMILY SSF53271 1 193 8.29E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 SMART SM00490 257 338 4.2E-32 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 SUPERFAMILY SSF52540 73 359 1.78E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 Pfam PF00271 Helicase conserved C-terminal domain 231 338 8.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 Pfam PF00270 DEAD/DEAH box helicase 27 192 9.8E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 SMART SM00487 20 221 3.4E-61 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 Gene3D G3DSA:3.40.50.300 213 433 2.8E-48 T 11-10-2018 Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 Gene3D G3DSA:3.40.50.300 1 209 1.2E-73 T 11-10-2018 Rmag_0127 10a03dea50c432848bae1e7ec2a0a222 434 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR01900 YidC translocation/secretion protein signature 473 488 8.4E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR01900 YidC translocation/secretion protein signature 345 361 8.4E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR01900 YidC translocation/secretion protein signature 492 516 8.4E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 359 537 1.1E-68 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 Gene3D G3DSA:2.70.98.90 78 339 8.0E-79 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 357 6.7E-86 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 Pfam PF14849 YidC periplasmic domain 83 347 9.8E-69 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 257 272 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 467 489 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 503 526 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 87 108 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 173 193 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 225 243 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 330 350 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 PRINTS PR00701 60kDa inner membrane protein signature 421 444 8.0E-74 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 Pfam PF02096 60Kd inner membrane protein 360 537 2.4E-58 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Rmag_1040 db3bd4f203c98351bf7d1f36485ba52a 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 539 23.293 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Pfam PF01493 GXGXG motif 1264 1449 2.8E-81 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 SUPERFAMILY SSF56235 24 451 3.47E-144 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Gene3D G3DSA:3.20.20.70 453 812 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Pfam PF00310 Glutamine amidotransferases class-II 24 448 3.8E-179 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Pfam PF01645 Conserved region in glutamate synthase 813 1181 6.3E-153 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Gene3D G3DSA:2.160.20.60 1235 1499 2.4E-109 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Gene3D G3DSA:3.60.20.10 24 564 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Gene3D G3DSA:3.20.20.70 502 1198 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 Pfam PF04898 Glutamate synthase central domain 476 757 2.1E-110 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 SUPERFAMILY SSF69336 1232 1495 2.49E-93 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Rmag_1018 180958b93d574c0c5c1492c340683cf6 1499 SUPERFAMILY SSF51395 461 1216 2.85E-252 T 11-10-2018 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 Gene3D G3DSA:3.40.470.10 1 219 2.5E-90 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 SUPERFAMILY SSF52141 5 218 6.54E-84 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 4 213 5.1E-78 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 Pfam PF03167 Uracil DNA glycosylase superfamily 54 207 6.0E-23 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 SMART SM00987 48 208 1.5E-35 T 11-10-2018 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 SMART SM00986 48 208 1.5E-35 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 219 37.491 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0683 f0dafc9a335d6b6c5b6a325526d1a060 219 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 56 65 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 SUPERFAMILY SSF54631 161 295 5.66E-23 T 11-10-2018 Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 Gene3D G3DSA:3.30.465.10 309 384 1.9E-23 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 SMART SM01091 308 386 6.6E-18 T 11-10-2018 IPR005170 Transporter-associated domain Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 Pfam PF01595 Domain of unknown function DUF21 1 149 1.8E-34 T 11-10-2018 IPR002550 CNNM, transmembrane domain Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 Pfam PF00571 CBS domain 244 293 2.8E-4 T 11-10-2018 IPR000644 CBS domain Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 Pfam PF03471 Transporter associated domain 309 384 7.0E-16 T 11-10-2018 IPR005170 Transporter-associated domain Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 Gene3D G3DSA:3.10.580.10 155 308 4.9E-38 T 11-10-2018 Rmag_0350 2bb73b331ac2374864489b7b6d4ae795 389 SUPERFAMILY SSF56176 306 385 1.09E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1309 1.7E-75 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:1.10.274.100 491 641 1.4E-37 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:1.10.40.90 375 417 3.2E-21 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:2.40.50.100 1146 1209 4.9E-58 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 5.3E-85 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 397 3.2E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Pfam PF00623 RNA polymerase Rpb1, domain 2 406 486 1.2E-26 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 SMART SM00663 236 515 8.5E-177 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:2.40.50.100 1024 1121 1.7E-20 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:1.10.132.30 642 791 2.1E-63 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 SUPERFAMILY SSF64484 16 1358 0.0 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:2.40.50.100 949 1023 1.2E-22 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 764 2.1E-18 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 645 4.6E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1371 18.562 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1030 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:1.10.1790.20 1130 1308 4.9E-58 T 11-10-2018 Rmag_0810 9a76129e88166d26d75a898d6f8b4ac1 1395 Gene3D G3DSA:1.10.150.390 1310 1370 2.1E-27 T 11-10-2018 Rmag_0942 73986141dc50dbc017160d36eb384417 606 Pfam PF00270 DEAD/DEAH box helicase 37 203 1.3E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Rmag_0942 73986141dc50dbc017160d36eb384417 606 SUPERFAMILY SSF52540 81 368 3.25E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0942 73986141dc50dbc017160d36eb384417 606 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Rmag_0942 73986141dc50dbc017160d36eb384417 606 Gene3D G3DSA:3.40.50.300 220 462 2.4E-54 T 11-10-2018 Rmag_0942 73986141dc50dbc017160d36eb384417 606 SMART SM00487 31 229 4.4E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_0942 73986141dc50dbc017160d36eb384417 606 Gene3D G3DSA:3.30.70.330 481 554 5.9E-14 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Rmag_0942 73986141dc50dbc017160d36eb384417 606 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 7 553 42.774 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Rmag_0942 73986141dc50dbc017160d36eb384417 606 Gene3D G3DSA:3.40.50.300 12 218 6.2E-70 T 11-10-2018 Rmag_0942 73986141dc50dbc017160d36eb384417 606 SMART SM00490 266 347 1.9E-33 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0942 73986141dc50dbc017160d36eb384417 606 Pfam PF03880 DbpA RNA binding domain 481 550 1.3E-20 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Rmag_0942 73986141dc50dbc017160d36eb384417 606 Pfam PF00271 Helicase conserved C-terminal domain 239 347 1.5E-29 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0514 afd39b8f12ee4cefa2070d90d1a9dc88 64 SUPERFAMILY SSF140319 1 62 1.12E-23 T 11-10-2018 IPR036762 IscX-like superfamily Rmag_0514 afd39b8f12ee4cefa2070d90d1a9dc88 64 PIRSF PIRSF039003 1 64 3.8E-31 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Rmag_0514 afd39b8f12ee4cefa2070d90d1a9dc88 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 1.4E-27 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Rmag_0514 afd39b8f12ee4cefa2070d90d1a9dc88 64 Gene3D G3DSA:1.10.10.600 1 64 7.7E-24 T 11-10-2018 IPR036762 IscX-like superfamily Rmag_0514 afd39b8f12ee4cefa2070d90d1a9dc88 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.2E-27 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Rmag_0308 a08af47848075eefa04ebf29c3f01103 148 SUPERFAMILY SSF53927 8 140 4.52E-28 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Rmag_0308 a08af47848075eefa04ebf29c3f01103 148 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 117 2.7E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Rmag_0308 a08af47848075eefa04ebf29c3f01103 148 PIRSF PIRSF006019 1 148 2.4E-40 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Rmag_0308 a08af47848075eefa04ebf29c3f01103 148 Gene3D G3DSA:3.40.140.10 2 147 2.7E-37 T 11-10-2018 Rmag_1007 93aba599e255cab3a92d0bd3202e0b9e 113 Pfam PF02699 Preprotein translocase subunit 31 103 2.5E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC Rmag_1007 93aba599e255cab3a92d0bd3202e0b9e 113 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 9.4E-13 T 11-10-2018 IPR003849 Preprotein translocase YajC Rmag_1007 93aba599e255cab3a92d0bd3202e0b9e 113 PRINTS PR01853 Bacterial YajC preprotein translocase signature 64 82 9.4E-13 T 11-10-2018 IPR003849 Preprotein translocase YajC Rmag_1007 93aba599e255cab3a92d0bd3202e0b9e 113 SMART SM01323 24 106 1.3E-38 T 11-10-2018 IPR003849 Preprotein translocase YajC Rmag_1007 93aba599e255cab3a92d0bd3202e0b9e 113 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 31 106 9.7E-25 T 11-10-2018 IPR003849 Preprotein translocase YajC Rmag_0902 b2ade063ff0597879e2ea0c2a50f9157 318 Gene3D G3DSA:3.40.50.720 7 304 3.6E-107 T 11-10-2018 Rmag_0902 b2ade063ff0597879e2ea0c2a50f9157 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 247 1.3E-71 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Rmag_0902 b2ade063ff0597879e2ea0c2a50f9157 318 Gene3D G3DSA:3.90.25.10 169 313 3.6E-107 T 11-10-2018 Rmag_0902 b2ade063ff0597879e2ea0c2a50f9157 318 SUPERFAMILY SSF51735 5 316 1.32E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0902 b2ade063ff0597879e2ea0c2a50f9157 318 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 315 47.38 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 Gene3D G3DSA:3.30.720.40 63 143 1.5E-21 T 11-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 SUPERFAMILY SSF54862 4 103 4.72E-21 T 11-10-2018 Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 Gene3D G3DSA:3.30.70.20 2 62 4.5E-23 T 11-10-2018 Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 Pfam PF12838 4Fe-4S dicluster domain 9 56 1.1E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 130 6.3E-61 T 11-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0087 699a03a2088142fff5a8d9dbd9f0b2c7 159 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 59 142 1.9E-37 T 11-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 326 2.6E-137 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 246 258 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 SUPERFAMILY SSF51569 3 328 3.22E-137 T 11-10-2018 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 7.6E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 7.6E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 7.6E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 123 137 7.6E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 7.6E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 154 173 7.6E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 PIRSF PIRSF001415 1 328 4.5E-144 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 Gene3D G3DSA:3.20.20.70 1 328 7.8E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0409 d488a80a6bcf81636372eeedad6efd32 328 SMART SM01004 3 327 1.3E-222 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 323 9.0E-26 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Gene3D G3DSA:1.10.150.20 242 326 1.1E-31 T 11-10-2018 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 SUPERFAMILY SSF55257 10 230 7.16E-25 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 SMART SM00662 23 231 2.8E-67 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 306 3.3E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 SUPERFAMILY SSF47789 248 320 4.05E-24 T 11-10-2018 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 155 2.3E-18 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 314 32.811 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-20 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 312 6.9E-97 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Gene3D G3DSA:3.30.1360.10 22 225 6.9E-71 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 Gene3D G3DSA:2.170.120.12 53 174 6.9E-71 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0190 c7d87756c5ab1847498baf9fc1ef32d7 326 SUPERFAMILY SSF56553 53 175 4.32E-33 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0928 0230077b3654193e8df170031c841cae 686 SMART SM00490 497 581 9.9E-15 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0928 0230077b3654193e8df170031c841cae 686 SUPERFAMILY SSF52540 200 446 8.5E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0928 0230077b3654193e8df170031c841cae 686 Pfam PF00271 Helicase conserved C-terminal domain 471 579 8.0E-14 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0928 0230077b3654193e8df170031c841cae 686 SUPERFAMILY SSF50249 4 170 1.52E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0928 0230077b3654193e8df170031c841cae 686 SUPERFAMILY SSF52540 288 645 6.86E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0928 0230077b3654193e8df170031c841cae 686 Gene3D G3DSA:3.40.50.300 204 443 8.5E-78 T 11-10-2018 Rmag_0928 0230077b3654193e8df170031c841cae 686 Gene3D G3DSA:3.40.50.300 451 622 9.0E-47 T 11-10-2018 Rmag_0928 0230077b3654193e8df170031c841cae 686 Pfam PF00270 DEAD/DEAH box helicase 266 424 5.4E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Rmag_0928 0230077b3654193e8df170031c841cae 686 SMART SM00487 261 452 1.8E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_0928 0230077b3654193e8df170031c841cae 686 Pfam PF17191 RecG wedge domain 10 164 1.5E-15 T 11-10-2018 IPR033454 RecG, wedge domain Rmag_0928 0230077b3654193e8df170031c841cae 686 Gene3D G3DSA:2.40.50.140 44 137 1.3E-6 T 11-10-2018 Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 Gene3D G3DSA:1.20.1180.10 193 258 3.8E-22 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 PIRSF PIRSF000456 1 263 1.0E-96 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 SUPERFAMILY SSF51161 2 258 1.54E-69 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 Gene3D G3DSA:2.160.10.10 1 191 2.5E-47 T 11-10-2018 Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 33 1.8E-4 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 134 3.0E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 3 256 1.2E-92 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Rmag_0556 f56c4815a934daf18143e6fd3e3d6187 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 257 6.1E-23 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 Pfam PF04851 Type III restriction enzyme, res subunit 24 270 1.3E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 Gene3D G3DSA:3.40.50.300 490 682 1.1E-26 T 11-10-2018 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 685 33.364 T 11-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 SMART SM00487 22 314 0.0061 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 SMART SM00491 533 666 7.9E-22 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 SMART SM00488 24 298 0.0016 T 11-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 Pfam PF13307 Helicase C-terminal domain 523 679 2.3E-29 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 SUPERFAMILY SSF52540 48 660 3.34E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0365 e92aca3bd086569b8a862826d010cf56 685 Gene3D G3DSA:3.40.50.300 24 306 1.1E-45 T 11-10-2018 Rmag_0095 c99d95c5e8e41d4c379a29d0caf357d5 79 SUPERFAMILY SSF49313 7 55 1.57E-5 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Rmag_0095 c99d95c5e8e41d4c379a29d0caf357d5 79 Gene3D G3DSA:2.60.40.10 2 70 6.0E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold Rmag_0289 c0e0a6ab889e625cf6d1fe951de8bd14 126 SUPERFAMILY SSF141734 4 119 3.27E-48 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Rmag_0289 c0e0a6ab889e625cf6d1fe951de8bd14 126 Gene3D G3DSA:3.10.20.400 1 94 1.4E-37 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Rmag_0289 c0e0a6ab889e625cf6d1fe951de8bd14 126 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 107 30.964 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Rmag_0289 c0e0a6ab889e625cf6d1fe951de8bd14 126 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 103 9.2E-34 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Rmag_0289 c0e0a6ab889e625cf6d1fe951de8bd14 126 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 106 4.0E-19 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 Gene3D G3DSA:3.20.20.70 66 331 1.7E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 Pfam PF04055 Radical SAM superfamily 107 271 1.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 Gene3D G3DSA:1.10.150.530 3 64 3.0E-21 T 11-10-2018 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 346 70.084 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 Pfam PF13394 4Fe-4S single cluster domain 111 204 3.1E-6 T 11-10-2018 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 PIRSF PIRSF006004 2 356 2.1E-136 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 SUPERFAMILY SSF102114 103 296 1.11E-16 T 11-10-2018 Rmag_0382 7103ef0216775e9670d3c6c6cbbda3f9 356 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 351 3.0E-127 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Rmag_0732 2d68ad81eb5feca9292777247f6903ee 262 Gene3D G3DSA:1.10.3470.10 34 262 5.5E-8 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Rmag_0732 2d68ad81eb5feca9292777247f6903ee 262 Pfam PF00950 ABC 3 transport family 2 256 9.2E-66 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Rmag_0732 2d68ad81eb5feca9292777247f6903ee 262 SUPERFAMILY SSF81345 3 253 8.5E-32 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Rmag_0329 71e958577e1eff3bbf725ad80cf8e280 314 Gene3D G3DSA:3.30.2350.10 80 311 1.3E-71 T 11-10-2018 Rmag_0329 71e958577e1eff3bbf725ad80cf8e280 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 308 5.1E-92 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0329 71e958577e1eff3bbf725ad80cf8e280 314 Pfam PF00849 RNA pseudouridylate synthase 89 237 4.2E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0329 71e958577e1eff3bbf725ad80cf8e280 314 SUPERFAMILY SSF55120 74 308 2.24E-74 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0329 71e958577e1eff3bbf725ad80cf8e280 314 Gene3D G3DSA:3.10.290.10 3 71 2.8E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Rmag_0329 71e958577e1eff3bbf725ad80cf8e280 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 131 145 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 Gene3D G3DSA:3.30.70.360 179 292 1.6E-117 T 11-10-2018 Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 SUPERFAMILY SSF55031 179 288 2.84E-26 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 Pfam PF07687 Peptidase dimerisation domain 175 282 2.8E-21 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 Gene3D G3DSA:3.40.630.10 7 363 1.6E-117 T 11-10-2018 Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 374 9.8E-160 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 Pfam PF01546 Peptidase family M20/M25/M40 63 373 2.4E-41 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 SUPERFAMILY SSF53187 2 374 2.88E-58 T 11-10-2018 Rmag_0274 00219a7feff79d7237a2b4f01d04e298 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 376 49.947 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 321 338 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Gene3D G3DSA:3.40.50.740 278 408 6.0E-29 T 11-10-2018 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Gene3D G3DSA:3.40.228.10 213 277 5.6E-13 T 11-10-2018 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 52 1.1E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Gene3D G3DSA:3.40.228.10 117 212 2.8E-21 T 11-10-2018 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 SUPERFAMILY SSF53706 4 417 2.22E-106 T 11-10-2018 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Pfam PF00384 Molybdopterin oxidoreductase 66 213 9.0E-18 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Pfam PF00384 Molybdopterin oxidoreductase 215 375 4.0E-21 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 Gene3D G3DSA:2.20.25.90 1 53 1.3E-15 T 11-10-2018 Rmag_0685 0b30480c78eda41485f5112d4ba5dc4e 485 SMART SM00926 1 54 5.6E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0512 a55c14899ffbd38703477f82e82f05b4 253 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 244 29.364 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD Rmag_0512 a55c14899ffbd38703477f82e82f05b4 253 Pfam PF13525 Outer membrane lipoprotein 35 236 3.3E-52 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Rmag_0512 a55c14899ffbd38703477f82e82f05b4 253 SUPERFAMILY SSF48452 37 122 2.28E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0512 a55c14899ffbd38703477f82e82f05b4 253 Gene3D G3DSA:1.25.40.10 35 248 4.8E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0512 a55c14899ffbd38703477f82e82f05b4 253 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 3 246 1.0E-64 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 645 690 9.3E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 SMART SM00863 645 690 6.2E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 198 209 1.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 225 238 1.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Pfam PF01411 tRNA synthetases class II (A) 5 547 7.7E-220 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 SUPERFAMILY SSF101353 245 450 1.96E-58 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Pfam PF02272 DHHA1 domain 728 865 1.5E-26 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Gene3D G3DSA:3.30.980.10 554 691 1.1E-46 T 11-10-2018 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Gene3D G3DSA:3.30.930.10 1 241 1.1E-111 T 11-10-2018 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 SUPERFAMILY SSF55681 2 244 2.11E-108 T 11-10-2018 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Gene3D G3DSA:2.40.30.130 452 544 2.2E-8 T 11-10-2018 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 848 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 SUPERFAMILY SSF55186 544 706 2.75E-46 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 184.061 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Gene3D G3DSA:3.10.310.40 758 865 3.4E-34 T 11-10-2018 Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 SUPERFAMILY SSF50447 445 544 5.65E-16 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0882 0c7b420edd19fcedc33540d97e3e3a45 865 Gene3D G3DSA:3.30.54.20 616 671 1.1E-46 T 11-10-2018 Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 52.839 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 SUPERFAMILY SSF53383 4 390 4.52E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 Pfam PF00266 Aminotransferase class-V 6 368 8.5E-84 T 11-10-2018 IPR000192 Aminotransferase class V domain Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 7.7E-223 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 Gene3D G3DSA:3.40.640.10 16 262 1.4E-158 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 PIRSF PIRSF005572 2 384 9.3E-130 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Rmag_0577 7bacfee862c6ebc35252afd6578ca514 404 Gene3D G3DSA:3.90.1150.10 6 375 1.4E-158 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 SMART SM01240 6 473 2.9E-302 T 11-10-2018 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 PIRSF PIRSF000130 1 486 5.1E-199 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 2.3E-184 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 SUPERFAMILY SSF54631 60 201 1.59E-23 T 11-10-2018 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 79.857 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 Pfam PF00571 CBS domain 93 138 4.3E-7 T 11-10-2018 IPR000644 CBS domain Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 Pfam PF00571 CBS domain 147 199 4.7E-4 T 11-10-2018 IPR000644 CBS domain Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 SMART SM00116 95 142 1.0E-6 T 11-10-2018 IPR000644 CBS domain Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 SMART SM00116 156 204 1.2E-5 T 11-10-2018 IPR000644 CBS domain Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 Gene3D G3DSA:3.20.20.70 1 486 5.8E-204 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 SUPERFAMILY SSF51412 4 477 1.44E-123 T 11-10-2018 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Rmag_0462 6a1f539860cb9c60802e019a405722e8 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 5.8E-161 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Rmag_0750 e7609022cfc68bdb5d39a238f251b85d 466 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 461 26.737 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0750 e7609022cfc68bdb5d39a238f251b85d 466 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 16 354 2.5E-120 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0750 e7609022cfc68bdb5d39a238f251b85d 466 Pfam PF02601 Exonuclease VII, large subunit 124 457 1.8E-90 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Rmag_0750 e7609022cfc68bdb5d39a238f251b85d 466 Pfam PF13742 OB-fold nucleic acid binding domain 9 100 4.1E-26 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 SUPERFAMILY SSF48256 3 375 1.44E-122 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PRINTS PR00143 Citrate synthase signature 127 140 6.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PRINTS PR00143 Citrate synthase signature 313 329 6.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PRINTS PR00143 Citrate synthase signature 251 271 6.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PRINTS PR00143 Citrate synthase signature 176 191 6.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PRINTS PR00143 Citrate synthase signature 198 226 6.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PRINTS PR00143 Citrate synthase signature 334 348 6.3E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 PIRSF PIRSF001369 1 378 3.6E-132 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 Gene3D G3DSA:1.10.580.10 19 353 2.1E-117 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 Gene3D G3DSA:1.10.230.10 224 328 2.1E-117 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Rmag_1063 412e61f925f8f78e6fcda0967f788f7d 378 Pfam PF00285 Citrate synthase, C-terminal domain 7 364 2.2E-119 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Rmag_0672 b751dc61d1ac86bc56c38a4ba20b4e20 202 PIRSF PIRSF006170 2 202 7.2E-60 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 Rmag_0672 b751dc61d1ac86bc56c38a4ba20b4e20 202 SUPERFAMILY SSF48452 53 185 3.92E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0672 b751dc61d1ac86bc56c38a4ba20b4e20 202 Pfam PF09976 Tetratricopeptide repeat-like domain 16 202 1.9E-46 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Rmag_0672 b751dc61d1ac86bc56c38a4ba20b4e20 202 Gene3D G3DSA:1.25.40.10 40 200 2.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 Pfam PF00549 CoA-ligase 151 267 6.3E-16 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-35 T 11-10-2018 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-35 T 11-10-2018 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-35 T 11-10-2018 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-35 T 11-10-2018 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 SMART SM00881 4 100 5.0E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 3.9E-137 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 Gene3D G3DSA:3.40.50.720 2 123 9.1E-51 T 11-10-2018 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 Pfam PF02629 CoA binding domain 6 99 2.9E-27 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 PIRSF PIRSF001553 1 289 3.0E-126 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 SUPERFAMILY SSF52210 123 285 6.02E-50 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 40.945 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 Gene3D G3DSA:3.40.50.261 124 288 2.7E-69 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0145 32102696122ed31bd3f7a3346f824d5c 289 SUPERFAMILY SSF51735 1 122 7.44E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0223 12d2264196882467d1ed0a1a91307141 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.3E-38 T 11-10-2018 Rmag_0223 12d2264196882467d1ed0a1a91307141 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 6.8E-42 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Rmag_0223 12d2264196882467d1ed0a1a91307141 217 Gene3D G3DSA:1.20.1440.100 15 88 8.3E-66 T 11-10-2018 Rmag_0223 12d2264196882467d1ed0a1a91307141 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 3.4E-26 T 11-10-2018 Rmag_0223 12d2264196882467d1ed0a1a91307141 217 Gene3D G3DSA:3.40.50.1000 3 213 8.3E-66 T 11-10-2018 IPR023214 HAD superfamily Rmag_0223 12d2264196882467d1ed0a1a91307141 217 SUPERFAMILY SSF56784 2 200 2.58E-33 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 SUPERFAMILY SSF52540 472 686 1.45E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 Pfam PF00664 ABC transporter transmembrane region 153 409 3.0E-18 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 Gene3D G3DSA:1.20.1560.10 133 446 6.0E-43 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 SUPERFAMILY SSF90123 130 444 8.37E-44 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 Pfam PF00005 ABC transporter 482 627 2.6E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 SMART SM00382 486 674 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0255 414f083e9586aca5b801a459d651bdf8 692 Gene3D G3DSA:3.40.50.300 449 691 2.6E-55 T 11-10-2018 Rmag_0166 e98ca58cc5e3ceeccb76e76abee2be01 204 Gene3D G3DSA:3.40.1370.10 2 204 1.3E-56 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0166 e98ca58cc5e3ceeccb76e76abee2be01 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 204 28.718 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0166 e98ca58cc5e3ceeccb76e76abee2be01 204 SUPERFAMILY SSF52166 1 204 1.22E-64 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0166 e98ca58cc5e3ceeccb76e76abee2be01 204 Pfam PF00573 Ribosomal protein L4/L1 family 16 202 6.3E-55 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Rmag_0166 e98ca58cc5e3ceeccb76e76abee2be01 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 201 9.0E-66 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 187 319 2.4E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Pfam PF06480 FtsH Extracellular 5 82 9.3E-9 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Gene3D G3DSA:1.20.58.760 396 602 6.9E-72 T 11-10-2018 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Pfam PF01434 Peptidase family M41 381 590 1.9E-81 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 SUPERFAMILY SSF140990 402 598 7.19E-73 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Gene3D G3DSA:1.10.8.60 322 395 1.0E-26 T 11-10-2018 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 607 36.696 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 98 592 1.1E-231 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Gene3D G3DSA:2.40.50.920 25 99 3.1E-12 T 11-10-2018 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 ProSitePatterns PS00674 AAA-protein family signature. 290 308 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 SUPERFAMILY SSF52540 142 390 1.26E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 SMART SM00382 183 322 4.3E-27 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0136 0434651df8b93f9f256dd16b2e0c6c7b 640 Gene3D G3DSA:3.40.50.300 135 321 6.0E-70 T 11-10-2018 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 SUPERFAMILY SSF52440 1 95 3.74E-15 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 Gene3D G3DSA:3.30.470.20 175 363 1.7E-70 T 11-10-2018 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 351 2.8E-112 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 SUPERFAMILY SSF51246 299 361 9.42E-16 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 SUPERFAMILY SSF56059 97 294 5.83E-60 T 11-10-2018 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 Gene3D G3DSA:3.30.1490.20 106 174 1.1E-22 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 Gene3D G3DSA:3.40.50.20 2 95 1.3E-21 T 11-10-2018 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 347 37.365 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Rmag_0838 9a0a328e835d68cd5460e6eeee27f1c3 363 Pfam PF02222 ATP-grasp domain 105 274 1.1E-53 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SMART SM00955 251 579 1.1E-163 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SUPERFAMILY SSF50249 623 701 1.87E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 Pfam PF00773 RNB domain 251 579 1.4E-104 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 Pfam PF00575 S1 RNA binding domain 620 700 2.4E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 77 701 1.2E-203 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SUPERFAMILY SSF50249 212 620 2.4E-133 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 Gene3D G3DSA:2.40.50.140 624 705 2.9E-17 T 11-10-2018 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 Pfam PF08206 Ribonuclease B OB domain 84 127 2.5E-12 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 ProSitePatterns PS01175 Ribonuclease II family signature. 546 570 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SMART SM00316 77 140 9.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SMART SM00316 621 704 1.0E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 Hamap MF_01895 Ribonuclease R [rnr]. 34 704 51.284 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SUPERFAMILY SSF50249 72 132 1.77E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 TIGRFAM TIGR02063 RNase_R: ribonuclease R 18 702 2.5E-237 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 Gene3D G3DSA:2.40.50.140 69 142 2.7E-14 T 11-10-2018 Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SUPERFAMILY SSF50249 135 228 9.43E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0530 3b8edbd31e22a949f62ad11235efe8e6 705 SMART SM00357 83 140 3.8E-4 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 Gene3D G3DSA:3.30.160.20 212 299 1.9E-92 T 11-10-2018 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 358 2.6E-157 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 Pfam PF03462 PCRF domain 14 205 1.2E-65 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 Gene3D G3DSA:3.30.70.1660 113 344 1.9E-92 T 11-10-2018 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 38.812 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 Pfam PF00472 RF-1 domain 214 323 8.3E-39 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 SUPERFAMILY SSF75620 13 355 5.49E-125 T 11-10-2018 Rmag_0731 6ee1eeea1622f242d23652dcac32f4ab 363 SMART SM00937 66 180 6.7E-55 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Rmag_0271 5847da86b0b0b5e3f269f9cd9a47a9ef 269 SUPERFAMILY SSF56784 59 267 5.38E-49 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0271 5847da86b0b0b5e3f269f9cd9a47a9ef 269 Gene3D G3DSA:3.40.50.1000 2 268 3.6E-68 T 11-10-2018 IPR023214 HAD superfamily Rmag_0271 5847da86b0b0b5e3f269f9cd9a47a9ef 269 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 59 266 9.9E-68 T 11-10-2018 Rmag_0271 5847da86b0b0b5e3f269f9cd9a47a9ef 269 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 63 234 3.3E-29 T 11-10-2018 Rmag_0271 5847da86b0b0b5e3f269f9cd9a47a9ef 269 Pfam PF12710 haloacid dehalogenase-like hydrolase 65 233 2.1E-13 T 11-10-2018 Rmag_0324 5ec104e6cc959b35be79fd35c9ca7d3c 115 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 115 2.2E-39 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 Rmag_0324 5ec104e6cc959b35be79fd35c9ca7d3c 115 SUPERFAMILY SSF52833 4 115 1.1E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0324 5ec104e6cc959b35be79fd35c9ca7d3c 115 Pfam PF03960 ArsC family 6 113 1.6E-17 T 11-10-2018 IPR006660 Arsenate reductase-like Rmag_0324 5ec104e6cc959b35be79fd35c9ca7d3c 115 Gene3D G3DSA:3.40.30.10 1 115 1.6E-45 T 11-10-2018 Rmag_0960 e15da14ca79912cdd2e1ed24555102b8 252 PRINTS PR00164 ABC-2 type transport system membrane protein signature 172 191 3.5E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Rmag_0960 e15da14ca79912cdd2e1ed24555102b8 252 PRINTS PR00164 ABC-2 type transport system membrane protein signature 135 159 3.5E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Rmag_0960 e15da14ca79912cdd2e1ed24555102b8 252 PRINTS PR00164 ABC-2 type transport system membrane protein signature 54 76 3.5E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Rmag_0960 e15da14ca79912cdd2e1ed24555102b8 252 PRINTS PR00164 ABC-2 type transport system membrane protein signature 192 211 3.5E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Rmag_0960 e15da14ca79912cdd2e1ed24555102b8 252 PIRSF PIRSF006648 7 249 5.4E-21 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Rmag_0960 e15da14ca79912cdd2e1ed24555102b8 252 Pfam PF01061 ABC-2 type transporter 5 214 1.6E-35 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 164 3.4E-74 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 SUPERFAMILY SSF51161 4 168 7.07E-53 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 Gene3D G3DSA:2.160.10.10 65 183 1.7E-36 T 11-10-2018 Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 Gene3D G3DSA:1.10.3130.10 2 64 1.0E-21 T 11-10-2018 Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 148 1.3E-7 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 106 1.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0579 7fc13a68b28a6c889f56108db2ce3d70 232 PIRSF PIRSF000441 1 226 1.7E-83 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Rmag_0237 86890ea7955f7a43132fc07772fc6d7e 118 Gene3D G3DSA:1.20.58.1610 1 118 3.5E-40 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0237 86890ea7955f7a43132fc07772fc6d7e 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 117 3.1E-36 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0237 86890ea7955f7a43132fc07772fc6d7e 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 19.35 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 421 40.068 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 SMART SM01210 330 421 3.2E-43 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Gene3D G3DSA:3.40.50.20 2 95 4.1E-34 T 11-10-2018 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 SUPERFAMILY SSF52440 1 103 1.01E-33 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Gene3D G3DSA:3.30.470.20 191 329 1.8E-56 T 11-10-2018 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 SUPERFAMILY SSF56059 104 323 2.3E-60 T 11-10-2018 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 SMART SM01209 103 296 7.8E-125 T 11-10-2018 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 418 1.9E-26 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 SUPERFAMILY SSF51246 329 421 5.96E-28 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Gene3D G3DSA:3.30.1490.20 121 190 7.7E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.5E-32 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Gene3D G3DSA:3.90.600.10 330 422 1.7E-30 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.8E-75 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0057 3aee9c443ce70e54ece0ba0cb2b61cd4 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 421 3.4E-166 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0405 3a77e8f07a19cf36ff0d5d707ede1fea 79 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 4.7E-22 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0405 3a77e8f07a19cf36ff0d5d707ede1fea 79 Gene3D G3DSA:3.90.940.10 1 79 1.2E-26 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Rmag_0405 3a77e8f07a19cf36ff0d5d707ede1fea 79 SMART SM01409 8 61 1.1E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Rmag_0405 3a77e8f07a19cf36ff0d5d707ede1fea 79 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.806 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Rmag_0405 3a77e8f07a19cf36ff0d5d707ede1fea 79 Pfam PF01192 RNA polymerase Rpb6 8 59 4.5E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Rmag_0405 3a77e8f07a19cf36ff0d5d707ede1fea 79 SUPERFAMILY SSF63562 1 69 1.57E-23 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 SMART SM00851 15 128 3.1E-54 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Rmag_0969 12aa530b839039c70b811eb635fa8472 513 SMART SM00798 133 445 1.4E-189 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 513 42.616 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 Gene3D G3DSA:3.40.50.1380 1 195 7.9E-83 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Rmag_0969 12aa530b839039c70b811eb635fa8472 513 SUPERFAMILY SSF53927 205 513 2.11E-123 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 Gene3D G3DSA:3.40.140.20 202 357 5.0E-57 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 SUPERFAMILY SSF52335 3 191 2.22E-64 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Rmag_0969 12aa530b839039c70b811eb635fa8472 513 PIRSF PIRSF000414 1 513 6.0E-216 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 Pfam PF02142 MGS-like domain 15 127 8.9E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Rmag_0969 12aa530b839039c70b811eb635fa8472 513 Gene3D G3DSA:3.40.140.20 376 513 6.3E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 444 1.9E-115 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0969 12aa530b839039c70b811eb635fa8472 513 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 513 6.7E-225 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0024 aa434b0af5618b3ee2ef61108bd66d06 372 Pfam PF01551 Peptidase family M23 246 342 3.1E-30 T 11-10-2018 IPR016047 Peptidase M23 Rmag_0024 aa434b0af5618b3ee2ef61108bd66d06 372 SUPERFAMILY SSF51261 113 345 3.61E-54 T 11-10-2018 IPR011055 Duplicated hybrid motif Rmag_0024 aa434b0af5618b3ee2ef61108bd66d06 372 Gene3D G3DSA:3.10.450.350 129 362 1.6E-68 T 11-10-2018 Rmag_0024 aa434b0af5618b3ee2ef61108bd66d06 372 Gene3D G3DSA:2.70.70.10 217 348 1.6E-68 T 11-10-2018 IPR011055 Duplicated hybrid motif Rmag_0024 aa434b0af5618b3ee2ef61108bd66d06 372 Gene3D G3DSA:3.10.450.350 21 107 6.1E-12 T 11-10-2018 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 608 1.1E-213 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 611 46.567 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 SUPERFAMILY SSF56601 246 608 5.82E-97 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 603 2.1E-75 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 Gene3D G3DSA:3.40.710.10 240 614 3.6E-101 T 11-10-2018 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 230 5.2E-41 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 Gene3D G3DSA:3.30.1390.30 82 156 7.1E-39 T 11-10-2018 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 Gene3D G3DSA:3.90.1310.10 61 239 7.1E-39 T 11-10-2018 Rmag_0797 16787ae4cf76f94a31073fc43061c524 616 SUPERFAMILY SSF56519 54 245 3.14E-41 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 12 296 3.6E-58 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 PIRSF PIRSF000006 1 297 1.8E-59 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 SUPERFAMILY SSF46626 205 295 2.44E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 Gene3D G3DSA:1.10.760.10 88 293 5.2E-47 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 115 189 4.5E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 206 290 3.6E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 10 59 3.1E-17 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 Gene3D G3DSA:1.20.58.1490 1 71 1.1E-10 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 SUPERFAMILY SSF46626 32 194 8.1E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0041 4237288d0153dd0207dd31363a004dd6 300 Gene3D G3DSA:1.10.760.10 170 268 5.2E-47 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 309 321 6.4E-10 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 172 187 6.4E-10 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 290 305 6.4E-10 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 254 264 6.4E-10 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 127 142 6.4E-10 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 SUPERFAMILY SSF63737 3 189 1.31E-38 T 11-10-2018 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 530 845 1.5E-83 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Gene3D G3DSA:2.60.40.1730 14 190 2.0E-59 T 11-10-2018 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 440 524 7.7E-17 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Gene3D G3DSA:1.25.50.10 528 845 1.6E-88 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Rmag_0440 3816378331558f7a33f757fdffe2da75 845 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 11 843 2.7E-304 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Gene3D G3DSA:1.10.390.10 276 439 4.1E-60 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Pfam PF01433 Peptidase family M1 domain 203 434 3.6E-55 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Gene3D G3DSA:2.60.40.1840 440 525 3.3E-17 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Rmag_0440 3816378331558f7a33f757fdffe2da75 845 SUPERFAMILY SSF55486 200 445 2.75E-70 T 11-10-2018 Rmag_0440 3816378331558f7a33f757fdffe2da75 845 Gene3D G3DSA:1.10.1740.60 191 275 1.9E-37 T 11-10-2018 Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 SUPERFAMILY SSF117916 98 186 9.37E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 Gene3D G3DSA:2.60.300.12 2 99 6.6E-8 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 32.4 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 181 5.0E-14 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 Gene3D G3DSA:3.30.300.130 107 191 1.6E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 Pfam PF01106 NifU-like domain 112 178 5.6E-20 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Rmag_0417 08087607eaf09dd9a39f0d114361685a 192 SUPERFAMILY SSF89360 1 98 5.69E-12 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 SUPERFAMILY SSF55120 10 229 1.12E-74 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 Gene3D G3DSA:3.30.2350.10 1 244 3.1E-83 T 11-10-2018 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 Gene3D G3DSA:2.30.130.10 245 302 1.4E-6 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 242 4.4E-15 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 181 1.5E-53 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 SUPERFAMILY SSF88697 247 301 6.46E-6 T 11-10-2018 IPR015947 PUA-like superfamily Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 248 301 1.4E-11 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 220 1.8E-76 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0056 dce2203024ad67dee57df17b2cb5624f 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 301 17.952 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0467 cf1533e67d60d30943920a8f8a90e498 224 Gene3D G3DSA:3.90.550.10 1 222 4.0E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0467 cf1533e67d60d30943920a8f8a90e498 224 SUPERFAMILY SSF53448 1 219 1.46E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0467 cf1533e67d60d30943920a8f8a90e498 224 Pfam PF00483 Nucleotidyl transferase 3 119 7.1E-21 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Rmag_0973 c13e501481b360278de43c21b106bcfb 439 Pfam PF01523 Putative modulator of DNA gyrase 24 314 6.0E-46 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Rmag_0973 c13e501481b360278de43c21b106bcfb 439 SUPERFAMILY SSF111283 4 438 1.44E-108 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Rmag_0973 c13e501481b360278de43c21b106bcfb 439 Gene3D G3DSA:3.30.2290.10 1 223 5.0E-69 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Rmag_0843 be5fb8c57ec204d9594ce4d5322aa024 315 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 312 36.199 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Rmag_0843 be5fb8c57ec204d9594ce4d5322aa024 315 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 307 5.9E-82 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Rmag_0843 be5fb8c57ec204d9594ce4d5322aa024 315 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 11 314 8.8E-98 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Rmag_0843 be5fb8c57ec204d9594ce4d5322aa024 315 SUPERFAMILY SSF52540 44 192 2.76E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0368 33385b514724ca346886a590419c2021 605 SUPERFAMILY SSF54980 398 513 1.15E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0368 33385b514724ca346886a590419c2021 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.4E-280 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 SUPERFAMILY SSF52540 3 207 5.31E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0368 33385b514724ca346886a590419c2021 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 8.6E-54 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 Gene3D G3DSA:3.30.70.870 306 590 1.5E-125 T 11-10-2018 Rmag_0368 33385b514724ca346886a590419c2021 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Rmag_0368 33385b514724ca346886a590419c2021 605 Gene3D G3DSA:2.40.30.10 199 299 1.4E-31 T 11-10-2018 Rmag_0368 33385b514724ca346886a590419c2021 605 Gene3D G3DSA:3.40.50.300 2 198 1.3E-63 T 11-10-2018 Rmag_0368 33385b514724ca346886a590419c2021 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 5.4E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 SUPERFAMILY SSF50447 151 299 6.65E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0368 33385b514724ca346886a590419c2021 605 Gene3D G3DSA:2.40.50.250 483 599 1.5E-125 T 11-10-2018 Rmag_0368 33385b514724ca346886a590419c2021 605 Pfam PF00679 Elongation factor G C-terminus 395 477 1.9E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Rmag_0368 33385b514724ca346886a590419c2021 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 5.0E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 SUPERFAMILY SSF54980 302 387 8.63E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0368 33385b514724ca346886a590419c2021 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 7.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 7.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 7.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 7.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 7.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0368 33385b514724ca346886a590419c2021 605 Gene3D G3DSA:3.30.70.240 389 482 1.5E-125 T 11-10-2018 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 SMART SM01228 545 616 8.2E-43 T 11-10-2018 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 SUPERFAMILY SSF51905 8 261 8.29E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Gene3D G3DSA:1.10.150.570 569 620 6.6E-23 T 11-10-2018 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Gene3D G3DSA:1.10.10.1800 461 549 5.1E-20 T 11-10-2018 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 621 1.4E-270 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Pfam PF01134 Glucose inhibited division protein A 11 400 1.2E-163 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 623 41.243 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Gene3D G3DSA:3.50.50.60 3 221 2.1E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Gene3D G3DSA:3.50.50.60 297 460 9.0E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 Pfam PF13932 GidA associated domain 404 615 1.0E-74 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Rmag_0068 a93fe9bfb0043b9b41e5048900d3eb90 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 275 289 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:1.20.1640.10 30 532 9.1E-221 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 411 435 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 26 50 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 383 404 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 54 72 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 573 590 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 PRINTS PR00702 Acriflavin resistance protein family signature 490 513 8.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82866 316 516 5.89E-32 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:3.30.70.1430 588 695 9.1E-221 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82693 586 700 6.8E-10 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82714 200 278 5.49E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:3.30.2090.10 747 837 9.1E-221 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82693 56 150 5.93E-19 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Pfam PF00873 AcrB/AcrD/AcrF family 21 1062 1.7E-138 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:3.30.2090.10 193 283 9.1E-221 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:1.20.1640.10 533 1062 9.1E-221 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:3.30.70.1430 56 845 9.1E-221 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82714 748 834 6.8E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82693 150 348 1.75E-8 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:3.30.70.1440 696 912 9.1E-221 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 Gene3D G3DSA:3.30.70.1320 150 353 9.1E-221 T 11-10-2018 Rmag_0544 4591d037b04c15f123c8c26d7bf702eb 1134 SUPERFAMILY SSF82866 899 1062 4.84E-39 T 11-10-2018 Rmag_0611 aaffe447b7fbda1238076933131c099f 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 236 7.9E-97 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Rmag_0611 aaffe447b7fbda1238076933131c099f 241 Gene3D G3DSA:3.20.20.70 1 241 5.5E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0611 aaffe447b7fbda1238076933131c099f 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 237 6.6E-94 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Rmag_0611 aaffe447b7fbda1238076933131c099f 241 SUPERFAMILY SSF63892 2 239 3.27E-92 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Rmag_0611 aaffe447b7fbda1238076933131c099f 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 116.746 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Rmag_0327 1d7216f6161ea4abbc5ce20a40057429 225 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 14 190 1.1E-40 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Rmag_0327 1d7216f6161ea4abbc5ce20a40057429 225 Gene3D G3DSA:3.40.50.620 9 225 5.4E-49 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0327 1d7216f6161ea4abbc5ce20a40057429 225 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 13 73 1.2E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0327 1d7216f6161ea4abbc5ce20a40057429 225 SUPERFAMILY SSF52374 10 223 1.56E-38 T 11-10-2018 Rmag_0327 1d7216f6161ea4abbc5ce20a40057429 225 Pfam PF01467 Cytidylyltransferase-like 14 184 3.9E-27 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0327 1d7216f6161ea4abbc5ce20a40057429 225 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 10 215 23.29 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Rmag_0678 675877e38600daf5183ef6a4a9cb71c5 105 Gene3D G3DSA:2.102.10.10 6 105 3.5E-23 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Rmag_0678 675877e38600daf5183ef6a4a9cb71c5 105 SUPERFAMILY SSF50022 8 104 4.32E-21 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Rmag_0678 675877e38600daf5183ef6a4a9cb71c5 105 Pfam PF00355 Rieske [2Fe-2S] domain 17 86 7.8E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 Pfam PF01026 TatD related DNase 4 254 6.6E-77 T 11-10-2018 IPR001130 TatD family GO:0016788 Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 PIRSF PIRSF005902 1 256 6.9E-81 T 11-10-2018 IPR001130 TatD family GO:0016788 Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 1.0E-87 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 SUPERFAMILY SSF51556 3 254 3.18E-83 T 11-10-2018 IPR032466 Metal-dependent hydrolase Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Rmag_0071 c37b4ea1ed6744f2a6dc8b892a56c5c9 256 Gene3D G3DSA:3.20.20.140 1 256 5.3E-90 T 11-10-2018 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Gene3D G3DSA:2.60.260.20 246 326 4.6E-28 T 11-10-2018 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 362 38.902 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Pfam PF01556 DnaJ C terminal domain 114 326 1.1E-43 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 SUPERFAMILY SSF46565 1 102 1.83E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 11-10-2018 IPR018253 DnaJ domain, conserved site Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 SUPERFAMILY SSF57938 127 204 6.02E-20 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Gene3D G3DSA:1.10.287.110 1 109 6.1E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Gene3D G3DSA:2.10.230.10 131 205 3.4E-20 T 11-10-2018 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 SUPERFAMILY SSF49493 111 249 3.14E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Pfam PF00684 DnaJ central domain 140 200 4.0E-10 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 SUPERFAMILY SSF49493 252 337 1.16E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 342 1.6E-127 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 Pfam PF00226 DnaJ domain 5 68 1.5E-25 T 11-10-2018 IPR001623 DnaJ domain Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 PRINTS PR00625 DnaJ domain signature 7 25 8.4E-27 T 11-10-2018 IPR001623 DnaJ domain Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 PRINTS PR00625 DnaJ domain signature 63 82 8.4E-27 T 11-10-2018 IPR001623 DnaJ domain Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 PRINTS PR00625 DnaJ domain signature 25 40 8.4E-27 T 11-10-2018 IPR001623 DnaJ domain Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 PRINTS PR00625 DnaJ domain signature 43 63 8.4E-27 T 11-10-2018 IPR001623 DnaJ domain Rmag_0352 16c01cc404067f885cad28a03fb2b146 364 SMART SM00271 4 63 7.4E-27 T 11-10-2018 IPR001623 DnaJ domain Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 PIRSF PIRSF002158 6 276 9.1E-102 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 SMART SM01383 43 119 2.1E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 Gene3D G3DSA:2.40.50.140 2 114 7.5E-45 T 11-10-2018 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 Gene3D G3DSA:2.30.30.30 119 196 3.7E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 7.9E-57 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 6 274 1.2E-126 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 2 274 45.751 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 SMART SM01382 125 253 5.1E-90 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 SUPERFAMILY SSF50249 4 125 6.51E-45 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 Gene3D G3DSA:4.10.950.10 198 275 4.0E-35 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 SUPERFAMILY SSF50104 128 272 1.14E-60 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Rmag_0168 d2289b2dc7524b6b7ba373fc5dbd31c8 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 43 119 5.4E-34 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0659 42a54bdd03d28cd2b349c80f9d5118d2 139 Gene3D G3DSA:2.40.50.140 29 133 6.9E-36 T 11-10-2018 Rmag_0659 42a54bdd03d28cd2b349c80f9d5118d2 139 SUPERFAMILY SSF82093 29 133 4.97E-36 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Rmag_0659 42a54bdd03d28cd2b349c80f9d5118d2 139 Pfam PF03100 CcmE 4 127 4.8E-41 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Rmag_0659 42a54bdd03d28cd2b349c80f9d5118d2 139 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 137 30.494 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.7E-61 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.819 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 SUPERFAMILY SSF46906 68 141 9.16E-24 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 Gene3D G3DSA:3.30.1550.10 2 72 5.2E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 SUPERFAMILY SSF54747 3 72 2.35E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 8.0E-13 T 11-10-2018 Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 SMART SM00649 9 141 5.4E-76 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.7E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal Rmag_0815 018bd7d5568e96a59b2d4671ca8b716a 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.0E-21 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Rmag_0376 ceb61c4ba8953cb91bfc95fa0bf1f83c 291 Pfam PF12048 Protein of unknown function (DUF3530) 66 143 2.6E-15 T 11-10-2018 IPR022529 Protein of unknown function DUF3530 Rmag_0376 ceb61c4ba8953cb91bfc95fa0bf1f83c 291 SUPERFAMILY SSF53474 76 273 2.36E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Rmag_0376 ceb61c4ba8953cb91bfc95fa0bf1f83c 291 Gene3D G3DSA:3.40.50.1820 75 291 1.9E-15 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 269 7.9E-74 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 Hamap MF_00082 Acetylglutamate kinase [argB]. 28 287 49.433 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 Gene3D G3DSA:3.40.1160.10 5 294 2.8E-97 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 PIRSF PIRSF000728 14 293 4.0E-105 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 SUPERFAMILY SSF53633 5 293 1.83E-93 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 PRINTS PR00474 Glutamate 5-kinase family signature 244 264 3.2E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 PRINTS PR00474 Glutamate 5-kinase family signature 60 74 3.2E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 PRINTS PR00474 Glutamate 5-kinase family signature 194 221 3.2E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0232 2953287d69eb11db581177b88ead0d9e 296 Pfam PF00696 Amino acid kinase family 29 271 1.6E-42 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Rmag_0162 81abda632b89617841010c01ae915a1b 700 Pfam PF14492 Elongation Factor G, domain II 411 484 1.2E-32 T 11-10-2018 Rmag_0162 81abda632b89617841010c01ae915a1b 700 SMART SM00889 487 605 7.9E-71 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 Pfam PF03764 Elongation factor G, domain IV 486 605 8.1E-46 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 Gene3D G3DSA:2.40.30.10 300 412 2.0E-45 T 11-10-2018 Rmag_0162 81abda632b89617841010c01ae915a1b 700 SUPERFAMILY SSF54980 610 697 4.12E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0162 81abda632b89617841010c01ae915a1b 700 SMART SM00838 607 694 5.5E-54 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Rmag_0162 81abda632b89617841010c01ae915a1b 700 Gene3D G3DSA:3.30.70.240 611 681 3.2E-89 T 11-10-2018 Rmag_0162 81abda632b89617841010c01ae915a1b 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 110.009 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_0162 81abda632b89617841010c01ae915a1b 700 SUPERFAMILY SSF52540 6 288 1.92E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0162 81abda632b89617841010c01ae915a1b 700 Gene3D G3DSA:3.30.70.870 413 490 1.5E-30 T 11-10-2018 Rmag_0162 81abda632b89617841010c01ae915a1b 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_0162 81abda632b89617841010c01ae915a1b 700 SUPERFAMILY SSF50447 271 411 1.72E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0162 81abda632b89617841010c01ae915a1b 700 Pfam PF00679 Elongation factor G C-terminus 607 693 9.8E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Rmag_0162 81abda632b89617841010c01ae915a1b 700 Gene3D G3DSA:3.30.230.10 491 694 3.2E-89 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0162 81abda632b89617841010c01ae915a1b 700 SUPERFAMILY SSF54211 486 606 1.87E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0162 81abda632b89617841010c01ae915a1b 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Rmag_0162 81abda632b89617841010c01ae915a1b 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.3E-65 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.1E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 SUPERFAMILY SSF54980 411 488 6.12E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0162 81abda632b89617841010c01ae915a1b 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 1.4E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0162 81abda632b89617841010c01ae915a1b 700 Gene3D G3DSA:3.40.50.300 2 299 7.1E-114 T 11-10-2018 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 Gene3D G3DSA:2.40.150.20 1 122 3.5E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 9.9E-55 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.791 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 SUPERFAMILY SSF50193 1 122 3.27E-49 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 SMART SM01374 1 122 1.9E-79 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Rmag_0175 1ab58a3e9f97ca546d5c141c901c3ba2 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.5E-52 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 SUPERFAMILY SSF52540 6 167 1.22E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0673 88cda144223ebdf46298139ea83ff338 465 PIRSF PIRSF006485 2 442 9.2E-164 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 335 2.8E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 161 2.6E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Hamap MF_00195 GTPase Der [der]. 3 437 35.393 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Gene3D G3DSA:3.30.300.20 355 436 5.8E-21 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Gene3D G3DSA:3.40.50.300 2 162 7.9E-36 T 11-10-2018 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 1.4E-25 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Rmag_0673 88cda144223ebdf46298139ea83ff338 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 3.3E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 94 3.3E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 SUPERFAMILY SSF52540 140 441 2.24E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Gene3D G3DSA:3.40.50.300 174 351 8.5E-48 T 11-10-2018 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 7.6E-157 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Pfam PF01926 50S ribosome-binding GTPase 6 123 9.9E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0673 88cda144223ebdf46298139ea83ff338 465 Pfam PF01926 50S ribosome-binding GTPase 181 298 3.5E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0707 76338280d3982dc0bae9d65d69f049cc 218 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0707 76338280d3982dc0bae9d65d69f049cc 218 Gene3D G3DSA:3.40.50.300 1 217 2.6E-60 T 11-10-2018 Rmag_0707 76338280d3982dc0bae9d65d69f049cc 218 SMART SM00382 26 215 2.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0707 76338280d3982dc0bae9d65d69f049cc 218 Pfam PF00005 ABC transporter 17 164 2.8E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0707 76338280d3982dc0bae9d65d69f049cc 218 SUPERFAMILY SSF52540 1 215 7.92E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0853 aa54d1b25cff4121aebae43428f8dbc0 248 Gene3D G3DSA:3.40.50.10090 4 235 2.2E-43 T 11-10-2018 Rmag_0853 aa54d1b25cff4121aebae43428f8dbc0 248 SUPERFAMILY SSF69618 2 237 1.01E-36 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0853 aa54d1b25cff4121aebae43428f8dbc0 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 232 1.2E-26 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Rmag_0853 aa54d1b25cff4121aebae43428f8dbc0 248 Gene3D G3DSA:3.40.50.10090 32 153 2.2E-43 T 11-10-2018 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 PRINTS PR00061 Ribosomal protein L19 signature 3 32 8.3E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 PRINTS PR00061 Ribosomal protein L19 signature 33 62 8.3E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 PRINTS PR00061 Ribosomal protein L19 signature 87 112 8.3E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 4.5E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 SUPERFAMILY SSF50104 1 114 1.81E-44 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 Pfam PF01245 Ribosomal protein L19 2 112 2.8E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.413 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 Gene3D G3DSA:2.30.30.790 4 117 1.1E-11 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0872 c67e3531fb160b135b4948bc23fdcaa0 117 PIRSF PIRSF002191 1 117 2.2E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0584 fa641b87e31440f0c11470aa2f8f2ef8 309 Gene3D G3DSA:3.30.470.10 1 131 1.0E-41 T 11-10-2018 Rmag_0584 fa641b87e31440f0c11470aa2f8f2ef8 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 12 304 3.6E-135 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Rmag_0584 fa641b87e31440f0c11470aa2f8f2ef8 309 SUPERFAMILY SSF56752 4 304 7.46E-103 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Rmag_0584 fa641b87e31440f0c11470aa2f8f2ef8 309 Gene3D G3DSA:3.20.10.10 132 306 7.0E-53 T 11-10-2018 Rmag_0584 fa641b87e31440f0c11470aa2f8f2ef8 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 195 223 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Rmag_0584 fa641b87e31440f0c11470aa2f8f2ef8 309 Pfam PF01063 Amino-transferase class IV 37 267 5.4E-52 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Rmag_0861 fe2808c9a25f19b9c4c52f124dccf59f 127 SUPERFAMILY SSF48695 40 118 6.37E-12 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Rmag_0861 fe2808c9a25f19b9c4c52f124dccf59f 127 Gene3D G3DSA:3.90.10.10 44 123 1.0E-7 T 11-10-2018 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 Gene3D G3DSA:4.10.520.10 10 101 1.8E-25 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 SMART SM00411 10 99 4.7E-24 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 SUPERFAMILY SSF47729 10 99 2.21E-25 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 PRINTS PR01727 Prokaryotic integration host factor signature 49 64 1.4E-11 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 PRINTS PR01727 Prokaryotic integration host factor signature 67 80 1.4E-11 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 PRINTS PR01727 Prokaryotic integration host factor signature 83 97 1.4E-11 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 55 74 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Rmag_0591 4f16ccf4a79402dd6451779fe0d6f785 101 Pfam PF00216 Bacterial DNA-binding protein 10 99 1.4E-23 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0238 9d883e0ec9142363faeb47134282d32d 159 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0238 9d883e0ec9142363faeb47134282d32d 159 Gene3D G3DSA:3.40.50.12280 1 159 4.6E-80 T 11-10-2018 Rmag_0238 9d883e0ec9142363faeb47134282d32d 159 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.713 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0238 9d883e0ec9142363faeb47134282d32d 159 SUPERFAMILY SSF56770 9 153 1.2E-67 T 11-10-2018 Rmag_0238 9d883e0ec9142363faeb47134282d32d 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 5.8E-23 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0238 9d883e0ec9142363faeb47134282d32d 159 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 9.1E-77 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0748 c45eaf717ce02ffeef3c597cff20ca17 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 183 3.0E-23 T 11-10-2018 Rmag_0748 c45eaf717ce02ffeef3c597cff20ca17 204 Pfam PF04356 Protein of unknown function (DUF489) 6 193 8.8E-57 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD Rmag_0748 c45eaf717ce02ffeef3c597cff20ca17 204 SUPERFAMILY SSF101322 1 197 3.66E-48 T 11-10-2018 IPR035932 HflD-like superfamily Rmag_0748 c45eaf717ce02ffeef3c597cff20ca17 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 201 26.972 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD Rmag_0748 c45eaf717ce02ffeef3c597cff20ca17 204 Gene3D G3DSA:1.10.3890.10 1 203 2.2E-57 T 11-10-2018 IPR035932 HflD-like superfamily Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 SUPERFAMILY SSF54686 3 132 1.44E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 Gene3D G3DSA:3.90.1170.10 1 136 2.5E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.1E-45 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-56 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.9E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.9E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.9E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.9E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.07 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0172 9d475076bdda337bae59c2d6d1c3bdd6 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 447 31.752 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 SUPERFAMILY SSF116878 121 447 3.01E-46 T 11-10-2018 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 SUPERFAMILY SSF52540 72 366 8.5E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Gene3D G3DSA:3.40.50.300 217 376 3.3E-96 T 11-10-2018 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Pfam PF01926 50S ribosome-binding GTPase 218 329 1.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Gene3D G3DSA:3.30.1360.120 1 121 6.2E-37 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 447 1.2E-104 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 363 1.8E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 5.3E-35 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Pfam PF12631 MnmE helical domain 123 444 1.1E-52 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Rmag_1014 1eacfeb948e44c1057586df594d654d5 447 Gene3D G3DSA:1.20.120.430 122 447 3.3E-96 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Rmag_0387 cb5166a5fb7e30c29c8a3ea91dc5754b 457 ProSitePatterns PS01276 Peptidase family U32 signature. 168 186 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Rmag_0387 cb5166a5fb7e30c29c8a3ea91dc5754b 457 Gene3D G3DSA:2.40.30.10 348 425 1.1E-8 T 11-10-2018 Rmag_0387 cb5166a5fb7e30c29c8a3ea91dc5754b 457 Pfam PF01136 Peptidase family U32 82 337 4.0E-95 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Rmag_0387 cb5166a5fb7e30c29c8a3ea91dc5754b 457 Pfam PF16325 Peptidase family U32 C-terminal domain 352 431 2.4E-17 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 111 129 9.3E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 132 148 9.3E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 97 9.3E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 195 204 9.3E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 167 180 9.3E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 151 164 9.3E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 314 48.046 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 146 5.5E-59 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 Gene3D G3DSA:3.90.226.10 2 316 3.3E-112 T 11-10-2018 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 1.1E-142 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_0123 519a4ec37b962363dc8223e2a2ed7c61 316 SUPERFAMILY SSF52096 5 314 2.99E-98 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Rmag_0468 78125ffb5664d6ed27bd2f06f98d5423 314 Gene3D G3DSA:3.30.200.20 4 92 3.1E-20 T 11-10-2018 Rmag_0468 78125ffb5664d6ed27bd2f06f98d5423 314 Pfam PF01636 Phosphotransferase enzyme family 27 240 8.2E-23 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Rmag_0468 78125ffb5664d6ed27bd2f06f98d5423 314 SUPERFAMILY SSF56112 9 300 3.83E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Rmag_0468 78125ffb5664d6ed27bd2f06f98d5423 314 Gene3D G3DSA:3.90.1200.10 93 313 4.5E-66 T 11-10-2018 Rmag_0923 e51818424a67a94a5b21258757d04d56 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 123 4.5E-41 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Rmag_0923 e51818424a67a94a5b21258757d04d56 124 SUPERFAMILY SSF51230 4 122 4.08E-34 T 11-10-2018 IPR011053 Single hybrid motif Rmag_0923 e51818424a67a94a5b21258757d04d56 124 Gene3D G3DSA:2.40.50.100 1 124 1.4E-40 T 11-10-2018 Rmag_0923 e51818424a67a94a5b21258757d04d56 124 Pfam PF01597 Glycine cleavage H-protein 9 115 2.4E-38 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Rmag_0923 e51818424a67a94a5b21258757d04d56 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 124 31.122 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 8 509 8.8E-210 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 Pfam PF01676 Metalloenzyme superfamily 9 498 4.6E-74 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 SUPERFAMILY SSF53649 9 509 6.76E-67 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 PIRSF PIRSF001492 1 512 3.9E-200 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 SUPERFAMILY SSF64158 79 305 6.02E-76 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 Gene3D G3DSA:3.40.1450.10 79 308 3.0E-208 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 296 6.6E-75 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 510 47.947 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_1070 b01fb66476e07d1f6054ceaa07f93a10 512 Gene3D G3DSA:3.40.720.10 9 507 3.0E-208 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 Gene3D G3DSA:3.20.20.70 121 268 7.5E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 109 2.3E-22 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 Gene3D G3DSA:3.90.1170.20 12 275 7.5E-92 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 277 3.9E-80 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 PIRSF PIRSF006250 4 278 2.1E-78 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 276 1.3E-49 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 SUPERFAMILY SSF54675 8 109 5.49E-24 T 11-10-2018 Rmag_0106 bf1018981ee6c328b9e05caa9fbcfa4c 278 SUPERFAMILY SSF51690 111 277 7.85E-53 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 Gene3D G3DSA:2.30.30.30 118 176 3.3E-20 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 SMART SM00738 2 111 3.4E-42 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 Pfam PF02357 Transcription termination factor nusG 3 108 2.2E-25 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 6.2E-62 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 SUPERFAMILY SSF50104 121 176 8.42E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 22.903 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.0E-14 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.0E-14 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.0E-14 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 Gene3D G3DSA:3.30.70.940 1 117 6.5E-43 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Rmag_0816 051de7e3c8315cfce7779deb6dc00472 177 SUPERFAMILY SSF82679 3 114 8.76E-37 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 Pfam PF01039 Carboxyl transferase domain 97 237 9.7E-22 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 6.2E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 6.2E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 6.2E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 6.2E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 6.2E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 278 6.1E-125 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 36.992 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 Gene3D G3DSA:3.90.226.10 23 280 3.0E-86 T 11-10-2018 Rmag_1024 85f7ceb89b294e6d02b746b14cda03cb 282 SUPERFAMILY SSF52096 23 276 2.43E-85 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 Gene3D G3DSA:3.30.470.20 82 290 1.7E-66 T 11-10-2018 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 SUPERFAMILY SSF56059 93 290 4.21E-51 T 11-10-2018 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 236 264 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 Pfam PF07478 D-ala D-ala ligase C-terminus 125 290 9.5E-56 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 Gene3D G3DSA:3.30.1490.20 108 171 1.7E-66 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 Pfam PF01820 D-ala D-ala ligase N-terminus 2 83 4.7E-15 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 SUPERFAMILY SSF52440 2 93 7.19E-22 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 PIRSF PIRSF039102 1 46 4.1E-8 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 PIRSF PIRSF039102 39 293 4.1E-73 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 293 27.733 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 Gene3D G3DSA:3.40.50.20 1 81 9.4E-25 T 11-10-2018 Rmag_0759 9532bc702452e40d92abccf3448c26ad 293 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 292 4.3E-88 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0704 639671eec163693af50e2b9941f46e21 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 27 409 1.7E-117 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Rmag_0704 639671eec163693af50e2b9941f46e21 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 129.367 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Rmag_0704 639671eec163693af50e2b9941f46e21 409 SUPERFAMILY SSF56266 27 406 2.01E-124 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Rmag_0704 639671eec163693af50e2b9941f46e21 409 Gene3D G3DSA:3.60.70.12 12 279 5.7E-82 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Rmag_0704 639671eec163693af50e2b9941f46e21 409 Pfam PF01960 ArgJ family 28 409 1.4E-134 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Rmag_0704 639671eec163693af50e2b9941f46e21 409 Gene3D G3DSA:3.10.20.340 280 409 2.3E-40 T 11-10-2018 Rmag_0704 639671eec163693af50e2b9941f46e21 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 32 407 7.0E-139 T 11-10-2018 Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 Gene3D G3DSA:2.60.40.10 348 462 8.3E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 Pfam PF12801 4Fe-4S binding domain 90 129 7.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 261 272 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 36 449 4.1E-127 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 Pfam PF13746 4Fe-4S dicluster domain 210 313 1.3E-37 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 SUPERFAMILY SSF54862 100 323 6.03E-23 T 11-10-2018 Rmag_0075 4c6976890a63e4802bcebed298ed286e 464 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 347 460 1.9E-23 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 3 408 28.104 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 SUPERFAMILY SSF51735 163 315 2.59E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 PIRSF PIRSF000445 2 413 3.9E-135 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 3.4E-43 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 SUPERFAMILY SSF69742 3 158 8.37E-45 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 SUPERFAMILY SSF69075 321 403 3.79E-14 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 399 2.4E-13 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 400 7.8E-125 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 8 156 3.4E-45 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 Gene3D G3DSA:3.30.460.30 2 158 3.2E-52 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Rmag_0730 1046739dc5249d55490cd51e7ba23a25 416 Gene3D G3DSA:3.40.50.720 162 312 5.7E-39 T 11-10-2018 Rmag_0903 5d53ed0e8a9d7fa3ea5916f21aa4360f 363 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 347 55.658 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Rmag_0903 5d53ed0e8a9d7fa3ea5916f21aa4360f 363 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 344 1.6E-183 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Rmag_0903 5d53ed0e8a9d7fa3ea5916f21aa4360f 363 Gene3D G3DSA:3.40.50.720 6 328 7.1E-165 T 11-10-2018 Rmag_0903 5d53ed0e8a9d7fa3ea5916f21aa4360f 363 Gene3D G3DSA:3.90.25.10 194 342 7.1E-165 T 11-10-2018 Rmag_0903 5d53ed0e8a9d7fa3ea5916f21aa4360f 363 SUPERFAMILY SSF51735 4 343 1.3E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0903 5d53ed0e8a9d7fa3ea5916f21aa4360f 363 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 337 9.3E-157 T 11-10-2018 IPR016040 NAD(P)-binding domain Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 Gene3D G3DSA:3.40.50.720 1 272 8.9E-93 T 11-10-2018 Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 341 39.101 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 Gene3D G3DSA:3.40.50.720 92 252 8.9E-93 T 11-10-2018 Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 SUPERFAMILY SSF52283 10 129 3.83E-16 T 11-10-2018 Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 SUPERFAMILY SSF51735 90 274 6.8E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 277 1.6E-15 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Rmag_0684 2f8b61e63ec2bf9586f58f0d21adae35 345 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 251 3.9E-22 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Rmag_0201 00843242ab7282f7575a4e023c9caefc 96 SUPERFAMILY SSF46626 21 85 2.51E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0201 00843242ab7282f7575a4e023c9caefc 96 Pfam PF00034 Cytochrome c 20 74 5.7E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0201 00843242ab7282f7575a4e023c9caefc 96 Gene3D G3DSA:1.10.760.10 22 95 4.1E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 PIRSF PIRSF000149 1 331 6.7E-128 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 Gene3D G3DSA:3.30.360.10 150 315 1.1E-145 T 11-10-2018 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 3.9E-65 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 Gene3D G3DSA:3.40.50.720 4 327 1.1E-145 T 11-10-2018 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.9E-131 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 SUPERFAMILY SSF55347 150 313 8.93E-74 T 11-10-2018 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 SUPERFAMILY SSF51735 3 167 7.51E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.0E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.0E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.0E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 SMART SM00846 3 151 4.5E-91 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0063 37b6f0c72528b67e4d93b8e2257a4e18 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 1.6E-37 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0177 377f77cc172a0af95538683b69571681 179 PIRSF PIRSF002161 1 179 3.6E-67 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0177 377f77cc172a0af95538683b69571681 179 SUPERFAMILY SSF55282 3 178 7.53E-73 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0177 377f77cc172a0af95538683b69571681 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 41.167 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0177 377f77cc172a0af95538683b69571681 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.8E-38 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0177 377f77cc172a0af95538683b69571681 179 Pfam PF00281 Ribosomal protein L5 24 80 3.4E-25 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0177 377f77cc172a0af95538683b69571681 179 Gene3D G3DSA:3.30.1440.10 1 178 4.8E-76 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0177 377f77cc172a0af95538683b69571681 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 SUPERFAMILY SSF100934 536 607 1.33E-5 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Gene3D G3DSA:3.30.420.40 181 367 3.1E-167 T 11-10-2018 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 SUPERFAMILY SSF53067 4 184 1.26E-64 T 11-10-2018 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 SUPERFAMILY SSF100920 385 541 2.35E-59 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Pfam PF00012 Hsp70 protein 4 603 3.1E-261 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Gene3D G3DSA:3.90.640.10 230 317 3.1E-167 T 11-10-2018 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Gene3D G3DSA:2.60.34.10 385 524 2.0E-63 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 389 408 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 470 486 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 139 159 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 55 63 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 199 209 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 366 386 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 PRINTS PR00301 70kDa heat shock protein signature 335 351 9.5E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Gene3D G3DSA:3.30.420.40 5 380 3.1E-167 T 11-10-2018 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 6.0E-286 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.247 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 SUPERFAMILY SSF53067 188 383 2.1E-68 T 11-10-2018 Rmag_0353 8f14e960ffd87ccae99f24171272c506 635 Gene3D G3DSA:1.20.1270.10 525 608 2.7E-20 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Rmag_0533 84f1287b43964dd11b562e2617b0ab6b 285 Pfam PF01145 SPFH domain / Band 7 family 22 196 1.0E-28 T 11-10-2018 IPR001107 Band 7 domain Rmag_0533 84f1287b43964dd11b562e2617b0ab6b 285 TIGRFAM TIGR01932 hflC: HflC protein 137 280 1.4E-48 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Rmag_0533 84f1287b43964dd11b562e2617b0ab6b 285 PIRSF PIRSF005651 1 285 3.8E-92 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Rmag_0533 84f1287b43964dd11b562e2617b0ab6b 285 SMART SM00244 18 181 5.8E-36 T 11-10-2018 IPR001107 Band 7 domain Rmag_0533 84f1287b43964dd11b562e2617b0ab6b 285 SUPERFAMILY SSF117892 50 187 4.32E-32 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Rmag_0533 84f1287b43964dd11b562e2617b0ab6b 285 Gene3D G3DSA:3.30.479.30 47 183 1.3E-25 T 11-10-2018 Rmag_1011 5944ea6fe61734a3f3dab9ab6c11a9eb 161 SMART SM00450 19 124 3.5E-17 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_1011 5944ea6fe61734a3f3dab9ab6c11a9eb 161 Pfam PF00581 Rhodanese-like domain 26 120 8.0E-14 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_1011 5944ea6fe61734a3f3dab9ab6c11a9eb 161 SUPERFAMILY SSF52821 4 130 1.83E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_1011 5944ea6fe61734a3f3dab9ab6c11a9eb 161 Gene3D G3DSA:3.40.250.10 1 133 1.4E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_0930 4284d23dc8ba741eb6c1f6b7f44b10e4 237 SUPERFAMILY SSF53335 17 237 1.23E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0930 4284d23dc8ba741eb6c1f6b7f44b10e4 237 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 3 237 1.3E-77 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Rmag_0930 4284d23dc8ba741eb6c1f6b7f44b10e4 237 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 1 237 37.838 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Rmag_0930 4284d23dc8ba741eb6c1f6b7f44b10e4 237 PIRSF PIRSF006325 1 237 1.6E-84 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Rmag_0930 4284d23dc8ba741eb6c1f6b7f44b10e4 237 Gene3D G3DSA:3.40.50.150 15 237 4.7E-52 T 11-10-2018 Rmag_0930 4284d23dc8ba741eb6c1f6b7f44b10e4 237 Pfam PF13847 Methyltransferase domain 53 164 2.8E-12 T 11-10-2018 IPR025714 Methyltransferase domain Rmag_0432 73d17e8a05bc80760696115ce13f9f0f 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 62 75 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0432 73d17e8a05bc80760696115ce13f9f0f 231 SMART SM00934 9 223 4.1E-58 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0432 73d17e8a05bc80760696115ce13f9f0f 231 SUPERFAMILY SSF51366 8 224 1.41E-49 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_0432 73d17e8a05bc80760696115ce13f9f0f 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 9 222 9.5E-27 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0432 73d17e8a05bc80760696115ce13f9f0f 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 10 224 4.8E-47 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Rmag_0432 73d17e8a05bc80760696115ce13f9f0f 231 Gene3D G3DSA:3.20.20.70 5 230 2.8E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 SUPERFAMILY SSF48163 292 452 1.96E-36 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 298 4.5E-95 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 450 7.8E-167 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 2.8E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 PRINTS PR00987 Glutamyl-tRNA synthetase signature 172 182 2.8E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 2.8E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 196 2.8E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 2.8E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 Gene3D G3DSA:1.10.10.350 356 452 5.1E-16 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 452 30.166 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 SUPERFAMILY SSF52374 3 290 1.15E-104 T 11-10-2018 Rmag_0474 6c875e5450acca90ad5e446f9b0b05a0 454 Gene3D G3DSA:3.40.50.620 1 307 2.0E-125 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 SUPERFAMILY SSF54631 138 277 2.36E-24 T 11-10-2018 Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 Pfam PF01769 Divalent cation transporter 322 443 1.6E-22 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 Gene3D G3DSA:1.10.357.20 276 450 1.4E-42 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 Pfam PF03448 MgtE intracellular N domain 36 136 1.0E-22 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 SMART SM00924 35 138 3.9E-29 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 Pfam PF00571 CBS domain 220 256 1.3E-4 T 11-10-2018 IPR000644 CBS domain Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 450 5.6E-81 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 Gene3D G3DSA:3.10.580.10 134 261 6.6E-38 T 11-10-2018 Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 SUPERFAMILY SSF161093 279 449 1.96E-42 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 SUPERFAMILY SSF158791 10 135 8.76E-25 T 11-10-2018 Rmag_0455 40ff4c67ab058e462a6974814a6d5300 450 Gene3D G3DSA:1.25.60.10 9 133 3.7E-14 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily Rmag_1064 a21c0c7409f19dadc24ebd8447b65eca 246 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 245 7.8E-92 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Rmag_1064 a21c0c7409f19dadc24ebd8447b65eca 246 SUPERFAMILY SSF53335 14 242 7.64E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_1064 a21c0c7409f19dadc24ebd8447b65eca 246 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 245 37.681 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Rmag_1064 a21c0c7409f19dadc24ebd8447b65eca 246 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Rmag_1064 a21c0c7409f19dadc24ebd8447b65eca 246 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 245 3.8E-83 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Rmag_1064 a21c0c7409f19dadc24ebd8447b65eca 246 Gene3D G3DSA:3.40.50.150 27 246 9.0E-70 T 11-10-2018 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 252 1.0E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 SUPERFAMILY SSF53738 154 255 5.49E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Gene3D G3DSA:3.40.120.10 172 361 2.5E-66 T 11-10-2018 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Gene3D G3DSA:3.30.310.50 369 441 2.5E-20 T 11-10-2018 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 368 1.4E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 SUPERFAMILY SSF53738 4 179 1.73E-43 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Gene3D G3DSA:3.40.120.10 2 149 7.7E-45 T 11-10-2018 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 435 5.1E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Gene3D G3DSA:3.40.120.10 255 338 2.5E-66 T 11-10-2018 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 439 43.708 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 1.3E-41 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 SUPERFAMILY SSF55957 357 439 8.5E-18 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 1.8E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 1.8E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 1.8E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 SUPERFAMILY SSF53738 256 363 5.1E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0138 a4ead6f869b87c6daaf63ef9f5f125a2 441 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 439 1.7E-176 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 10 477 18.472 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 477 1.0E-145 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 4.1E-7 T 11-10-2018 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 4.1E-7 T 11-10-2018 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 4.1E-7 T 11-10-2018 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 4.1E-7 T 11-10-2018 Rmag_0250 6da59db11943b4b7d3fba80fb9381c51 484 Pfam PF00361 Proton-conducting membrane transporter 131 426 1.7E-77 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0929 dac4b8bbfe82ebca5568a41b1d88fdd6 157 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 7 157 20.497 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Rmag_0929 dac4b8bbfe82ebca5568a41b1d88fdd6 157 Gene3D G3DSA:3.40.1410.10 2 155 2.0E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Rmag_0929 dac4b8bbfe82ebca5568a41b1d88fdd6 157 Pfam PF04345 Chorismate lyase 5 155 7.6E-31 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Rmag_0929 dac4b8bbfe82ebca5568a41b1d88fdd6 157 SUPERFAMILY SSF64288 11 151 1.96E-33 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Rmag_0624 e97b5b2e42a9b209a8afeb85d0285755 284 Pfam PF02153 Prephenate dehydrogenase 17 273 3.0E-68 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Rmag_0624 e97b5b2e42a9b209a8afeb85d0285755 284 SUPERFAMILY SSF51735 4 172 2.5E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0624 e97b5b2e42a9b209a8afeb85d0285755 284 Gene3D G3DSA:1.10.3660.10 179 283 5.0E-32 T 11-10-2018 Rmag_0624 e97b5b2e42a9b209a8afeb85d0285755 284 Gene3D G3DSA:3.40.50.720 2 178 3.6E-51 T 11-10-2018 Rmag_0624 e97b5b2e42a9b209a8afeb85d0285755 284 SUPERFAMILY SSF48179 177 282 3.51E-31 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 SUPERFAMILY SSF56322 6 428 1.31E-122 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 129 6.6E-11 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 Pfam PF00425 chorismate binding enzyme 168 420 1.3E-93 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 Gene3D G3DSA:3.60.120.10 2 429 6.4E-138 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 PRINTS PR00095 Anthranilate synthase component I signature 377 391 8.0E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 PRINTS PR00095 Anthranilate synthase component I signature 362 376 8.0E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 PRINTS PR00095 Anthranilate synthase component I signature 268 281 8.0E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0518 f2f7040e4bcf7e767308e964d1618b97 429 PRINTS PR00095 Anthranilate synthase component I signature 282 295 8.0E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 Pfam PF01220 Dehydroquinase class II 3 139 3.1E-53 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 62.117 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 SUPERFAMILY SSF52304 1 145 4.97E-57 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 Gene3D G3DSA:3.40.50.9100 1 148 5.9E-57 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 PIRSF PIRSF001399 1 146 2.1E-54 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 6.1E-55 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Rmag_1058 585804ef6caf287056fd12fe981c01c7 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 16 134 1.0E-34 T 11-10-2018 Rmag_1032 e1cca3ee0917e264bd8bd3bbceda418a 202 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 199 2.3E-44 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Rmag_1032 e1cca3ee0917e264bd8bd3bbceda418a 202 Gene3D G3DSA:3.20.20.70 1 201 4.6E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_1032 e1cca3ee0917e264bd8bd3bbceda418a 202 SUPERFAMILY SSF51366 1 200 2.83E-59 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_1032 e1cca3ee0917e264bd8bd3bbceda418a 202 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 202 36.422 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Rmag_0463 7900a8bca7a0a49aab73dcc966770bf7 216 Pfam PF08239 Bacterial SH3 domain 35 82 1.3E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Rmag_0463 7900a8bca7a0a49aab73dcc966770bf7 216 Gene3D G3DSA:2.30.30.40 23 86 1.4E-9 T 11-10-2018 Rmag_0463 7900a8bca7a0a49aab73dcc966770bf7 216 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 25 215 2.2E-55 T 11-10-2018 IPR016476 SH3 domain protein Rmag_0527 44c3c0303ff0d46e9872481c260f13b1 195 Gene3D G3DSA:3.30.420.10 2 194 1.1E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Rmag_0527 44c3c0303ff0d46e9872481c260f13b1 195 TIGRFAM TIGR01298 RNaseT: ribonuclease T 4 192 2.9E-78 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Rmag_0527 44c3c0303ff0d46e9872481c260f13b1 195 SUPERFAMILY SSF53098 3 191 8.07E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0527 44c3c0303ff0d46e9872481c260f13b1 195 Hamap MF_00157 Ribonuclease T [rnt]. 1 195 81.293 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Rmag_0527 44c3c0303ff0d46e9872481c260f13b1 195 SMART SM00479 11 195 1.7E-10 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0527 44c3c0303ff0d46e9872481c260f13b1 195 Pfam PF00929 Exonuclease 13 186 5.2E-27 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PIRSF PIRSF002869 1 495 2.4E-150 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 456 18.585 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 Pfam PF03023 MviN-like protein 16 452 4.7E-128 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 490 5.1E-130 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 147 168 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 21 40 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 398 415 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 248 274 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 123 147 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 346 365 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0557 64aa8a65fe050716b4635e192ab04ee8 495 PRINTS PR01806 Virulence factor MviN signature 40 56 7.4E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 428 1.5E-123 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 PIRSF PIRSF000505 1 432 3.0E-115 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 Gene3D G3DSA:3.65.10.10 16 420 3.6E-145 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 429 31.96 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 SUPERFAMILY SSF55205 4 428 4.45E-124 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 5.0E-115 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Rmag_0623 aec4e168edfd7b12405f1beac171bf4d 435 Gene3D G3DSA:3.65.10.10 22 229 3.6E-145 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 255 2.8E-86 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 PIRSF PIRSF000729 1 256 5.1E-84 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 Gene3D G3DSA:3.40.1160.10 1 256 3.2E-85 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 Pfam PF00696 Amino acid kinase family 5 231 3.5E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 1.2E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 1.2E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.2E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 1.2E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 1.2E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 SUPERFAMILY SSF53633 4 255 3.01E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0413 b9f9bb633871e4660147f7384b89de41 256 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 255 32.407 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Rmag_0660 c0cc704a01619e18e0f832b5dd42a8c4 58 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 2.9E-12 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Rmag_0660 c0cc704a01619e18e0f832b5dd42a8c4 58 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 13 51 1.9E-8 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 PIRSF PIRSF002599 1 67 6.6E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 1.3E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 11-10-2018 IPR019844 Cold-shock conserved site Rmag_0944 24215c6d186efa32fc234f7121836eef 67 PRINTS PR00050 Cold shock protein signature 40 58 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 PRINTS PR00050 Cold shock protein signature 25 34 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 PRINTS PR00050 Cold shock protein signature 5 20 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 SUPERFAMILY SSF50249 3 65 7.1E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0944 24215c6d186efa32fc234f7121836eef 67 SMART SM00357 4 67 1.7E-27 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Rmag_0944 24215c6d186efa32fc234f7121836eef 67 Gene3D G3DSA:2.40.50.140 3 65 5.8E-28 T 11-10-2018 Rmag_0576 5d0882929bcba1602b47f949a66c241a 125 Pfam PF01592 NifU-like N terminal domain 2 124 8.7E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Rmag_0576 5d0882929bcba1602b47f949a66c241a 125 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 124 2.9E-68 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Rmag_0576 5d0882929bcba1602b47f949a66c241a 125 Gene3D G3DSA:3.90.1010.10 1 125 1.7E-58 T 11-10-2018 Rmag_0576 5d0882929bcba1602b47f949a66c241a 125 SUPERFAMILY SSF82649 1 124 7.06E-50 T 11-10-2018 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Gene3D G3DSA:2.40.30.10 208 336 1.2E-52 T 11-10-2018 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.0E-15 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.0E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Gene3D G3DSA:3.40.50.300 1 205 2.2E-70 T 11-10-2018 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 SUPERFAMILY SSF50465 304 396 1.37E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rmag_0163 7805a63995a3efee20a807124a94d70a 396 SUPERFAMILY SSF50447 207 303 1.25E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0163 7805a63995a3efee20a807124a94d70a 396 SUPERFAMILY SSF52540 6 221 4.5E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Gene3D G3DSA:2.40.30.10 340 394 6.3E-29 T 11-10-2018 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.1E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.274 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 3.1E-222 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_0163 7805a63995a3efee20a807124a94d70a 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 7.2E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Rmag_0328 f0f945e13e9290e8c95376116b48d037 240 SMART SM00849 23 184 7.2E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase Rmag_0328 f0f945e13e9290e8c95376116b48d037 240 Gene3D G3DSA:3.60.15.10 21 239 1.8E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Rmag_0328 f0f945e13e9290e8c95376116b48d037 240 Pfam PF00753 Metallo-beta-lactamase superfamily 33 179 2.9E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase Rmag_0328 f0f945e13e9290e8c95376116b48d037 240 SUPERFAMILY SSF56281 23 209 2.38E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 442 1.1E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 264 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 300 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 351 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 437 2.2E-68 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 SUPERFAMILY SSF55424 331 443 8.59E-36 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 Gene3D G3DSA:3.50.50.60 143 256 7.9E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 443 2.2E-175 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.6E-28 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.6E-28 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 1.6E-28 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.6E-28 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 1.6E-28 T 11-10-2018 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 313 4.4E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 PIRSF PIRSF000350 1 442 3.4E-84 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 SUPERFAMILY SSF51905 1 358 3.5E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 Gene3D G3DSA:3.50.50.60 5 316 7.9E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0290 003e8e574060ff850b23d65e265e50ed 443 Gene3D G3DSA:3.30.390.30 333 443 1.9E-46 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 SMART SM00387 398 494 7.9E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 Pfam PF13185 GAF domain 141 278 2.9E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 Gene3D G3DSA:3.30.450.40 115 290 1.6E-16 T 11-10-2018 IPR029016 GAF-like domain superfamily Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 Gene3D G3DSA:3.30.565.10 360 493 2.0E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 Pfam PF07730 Histidine kinase 294 360 3.1E-10 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 SUPERFAMILY SSF55874 365 491 1.06E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 PIRSF PIRSF003167 23 494 5.1E-83 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 SUPERFAMILY SSF55781 125 283 2.62E-14 T 11-10-2018 Rmag_1013 747c92d6268ef3fadcc0ee58f5153664 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 492 1.2E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 SMART SM00936 275 362 3.6E-14 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 SUPERFAMILY SSF56601 9 275 5.9E-81 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 2.8E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 2.8E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 2.8E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 Gene3D G3DSA:3.40.710.10 18 273 5.2E-90 T 11-10-2018 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 SUPERFAMILY SSF69189 267 360 2.35E-16 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 361 9.9E-12 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 255 4.9E-78 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Rmag_0470 bc432e6af436e498379ac81e96d5768c 375 Gene3D G3DSA:2.60.410.10 275 362 2.1E-15 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 3.0E-21 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 19.632 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 6.9E-25 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 2.3E-38 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 Gene3D G3DSA:1.20.5.440 89 131 3.0E-12 T 11-10-2018 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 Gene3D G3DSA:2.60.15.10 2 88 4.6E-26 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 130 5.2E-10 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 SUPERFAMILY SSF46604 86 134 3.4E-11 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1044 525a0062eb90f8a2eafae75f34dbbb67 138 SUPERFAMILY SSF51344 3 84 2.49E-22 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1049 3fd6e1534520caf4d1d688500d53ebbf 157 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.2E-28 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Rmag_1049 3fd6e1534520caf4d1d688500d53ebbf 157 SUPERFAMILY SSF81573 63 121 3.66E-9 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Rmag_1049 3fd6e1534520caf4d1d688500d53ebbf 157 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 6.6E-37 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Rmag_1049 3fd6e1534520caf4d1d688500d53ebbf 157 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.52 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Rmag_1049 3fd6e1534520caf4d1d688500d53ebbf 157 Gene3D G3DSA:1.20.5.620 55 122 1.7E-8 T 11-10-2018 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 338 1.3E-132 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 337 35.888 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 Gene3D G3DSA:3.30.360.10 130 320 3.0E-136 T 11-10-2018 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 SMART SM00859 6 121 4.1E-36 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 SUPERFAMILY SSF55347 131 324 1.85E-72 T 11-10-2018 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 5.2E-28 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 SUPERFAMILY SSF51735 5 159 1.21E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 PIRSF PIRSF000148 4 341 3.4E-125 T 11-10-2018 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 Gene3D G3DSA:3.40.50.720 7 335 3.0E-136 T 11-10-2018 Rmag_0951 054a6f81f6e3bbc7331ffe18c2381fb0 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 323 2.0E-53 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Rmag_0069 8995c0abd29c604b1443cb76bb557963 190 Pfam PF02527 rRNA small subunit methyltransferase G 9 161 1.4E-48 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Rmag_0069 8995c0abd29c604b1443cb76bb557963 190 PIRSF PIRSF003078 1 190 2.9E-47 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Rmag_0069 8995c0abd29c604b1443cb76bb557963 190 Gene3D G3DSA:3.40.50.150 1 190 4.9E-53 T 11-10-2018 Rmag_0069 8995c0abd29c604b1443cb76bb557963 190 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 14 162 1.1E-46 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Rmag_0069 8995c0abd29c604b1443cb76bb557963 190 SUPERFAMILY SSF53335 2 188 1.06E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0069 8995c0abd29c604b1443cb76bb557963 190 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 2 185 25.825 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 Gene3D G3DSA:2.102.10.10 43 193 2.8E-45 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 131 1.5E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 152 164 1.5E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 SUPERFAMILY SSF50022 31 192 1.09E-40 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 193 9.6E-67 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 Pfam PF00355 Rieske [2Fe-2S] domain 109 180 1.4E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Rmag_0011 7a330f278d5e72fbb9c144e64006f1e2 198 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 40 3.8E-10 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 SUPERFAMILY SSF53067 7 99 1.97E-17 T 11-10-2018 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 Gene3D G3DSA:3.30.420.490 103 212 5.8E-46 T 11-10-2018 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 Pfam PF03309 Type III pantothenate kinase 60 179 1.4E-27 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 SUPERFAMILY SSF53067 102 223 8.29E-23 T 11-10-2018 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 Hamap MF_01274 Type III pantothenate kinase [coaX]. 6 227 16.161 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 Gene3D G3DSA:3.30.420.40 8 219 5.8E-46 T 11-10-2018 Rmag_0337 c45b9b572556fdf7bc5706794e236dc5 234 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 8 221 9.4E-24 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Rmag_0977 0ed8f4b8d02ea78c29e41bd3b8f9cf93 243 SUPERFAMILY SSF51366 1 240 3.92E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_0977 0ed8f4b8d02ea78c29e41bd3b8f9cf93 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.745 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Rmag_0977 0ed8f4b8d02ea78c29e41bd3b8f9cf93 243 Gene3D G3DSA:3.20.20.70 1 241 1.2E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0977 0ed8f4b8d02ea78c29e41bd3b8f9cf93 243 Pfam PF00977 Histidine biosynthesis protein 3 231 2.0E-78 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Rmag_0977 0ed8f4b8d02ea78c29e41bd3b8f9cf93 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 6.3E-79 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.3E-90 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 4.8E-38 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 Gene3D G3DSA:3.30.572.10 1 264 2.1E-124 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 6.0E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 6.0E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 6.0E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 6.0E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 6.0E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 Pfam PF00303 Thymidylate synthase 2 264 3.3E-120 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 SUPERFAMILY SSF55831 2 264 5.63E-122 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0616 96feb01af2b95cddf9660a837ecf5ff8 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 37.362 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Rmag_0806 b2b7ea7bb180e5f672a83ce8066d483e 100 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 98 8.9E-34 T 11-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ Rmag_0806 b2b7ea7bb180e5f672a83ce8066d483e 100 Gene3D G3DSA:2.60.40.10 1 100 9.7E-31 T 11-10-2018 IPR013783 Immunoglobulin-like fold Rmag_0806 b2b7ea7bb180e5f672a83ce8066d483e 100 Pfam PF08770 Sulphur oxidation protein SoxZ 9 97 5.2E-30 T 11-10-2018 IPR014880 Sulphur oxidation protein SoxZ Rmag_0806 b2b7ea7bb180e5f672a83ce8066d483e 100 SUPERFAMILY SSF81296 3 97 1.34E-25 T 11-10-2018 IPR014756 Immunoglobulin E-set Rmag_0568 2cf2648e8f860915d2f3aa5bc88724e5 636 Gene3D G3DSA:1.10.1370.10 121 567 1.0E-199 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Rmag_0568 2cf2648e8f860915d2f3aa5bc88724e5 636 Gene3D G3DSA:1.10.1370.40 7 631 1.0E-199 T 11-10-2018 Rmag_0568 2cf2648e8f860915d2f3aa5bc88724e5 636 Pfam PF01432 Peptidase family M3 196 634 2.8E-120 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Rmag_0568 2cf2648e8f860915d2f3aa5bc88724e5 636 SUPERFAMILY SSF55486 9 630 2.49E-152 T 11-10-2018 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 SUPERFAMILY SSF102114 6 313 8.24E-87 T 11-10-2018 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 311 6.9E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 Gene3D G3DSA:3.20.20.70 5 316 4.6E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 SMART SM00729 44 256 6.0E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 TIGRFAM TIGR00433 bioB: biotin synthase 17 311 1.2E-118 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 SMART SM00876 221 313 3.6E-43 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 Pfam PF04055 Radical SAM superfamily 51 200 1.2E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 PIRSF PIRSF001619 1 320 2.1E-129 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Rmag_0499 b8802befbc1ba7a88b3572c11e397a48 322 Hamap MF_01694 Biotin synthase [bioB]. 6 314 41.095 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Rmag_0258 bb77c4642813ef886755f15ff200fe6e 283 SUPERFAMILY SSF53807 20 282 2.5E-50 T 11-10-2018 Rmag_0258 bb77c4642813ef886755f15ff200fe6e 283 Gene3D G3DSA:3.40.50.1980 20 171 4.9E-30 T 11-10-2018 Rmag_0258 bb77c4642813ef886755f15ff200fe6e 283 Gene3D G3DSA:3.40.50.1980 173 283 7.8E-14 T 11-10-2018 Rmag_0258 bb77c4642813ef886755f15ff200fe6e 283 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 281 2.9E-35 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Rmag_1003 e59bbd02be630179aec9ce68f832ade0 169 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2 167 8.3E-85 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_1003 e59bbd02be630179aec9ce68f832ade0 169 Pfam PF07977 FabA-like domain 26 155 1.0E-47 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_1003 e59bbd02be630179aec9ce68f832ade0 169 Gene3D G3DSA:3.10.129.10 1 169 4.9E-62 T 11-10-2018 Rmag_1003 e59bbd02be630179aec9ce68f832ade0 169 SUPERFAMILY SSF54637 2 165 5.67E-53 T 11-10-2018 IPR029069 HotDog domain superfamily Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 14 288 5.6E-79 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 11 291 24.605 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 SUPERFAMILY SSF56104 8 290 8.83E-97 T 11-10-2018 Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 Pfam PF01259 SAICAR synthetase 14 265 5.8E-96 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 Gene3D G3DSA:3.30.200.20 3 102 5.8E-29 T 11-10-2018 Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 Gene3D G3DSA:3.30.470.20 103 247 4.0E-58 T 11-10-2018 Rmag_0023 c27ae0e6302535c97f5e20eeeb52d70d 292 ProSitePatterns PS01058 SAICAR synthetase signature 2. 203 211 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Rmag_0220 d486a3bc84257deccf901f4983ad5001 205 Hamap MF_00165 Thymidylate kinase [tmk]. 5 205 29.382 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Rmag_0220 d486a3bc84257deccf901f4983ad5001 205 Pfam PF02223 Thymidylate kinase 9 198 1.1E-49 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Rmag_0220 d486a3bc84257deccf901f4983ad5001 205 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 7.9E-55 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Rmag_0220 d486a3bc84257deccf901f4983ad5001 205 Gene3D G3DSA:3.40.50.300 1 205 2.4E-66 T 11-10-2018 Rmag_0220 d486a3bc84257deccf901f4983ad5001 205 SUPERFAMILY SSF52540 1 202 1.78E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Gene3D G3DSA:3.40.50.1000 483 747 1.6E-73 T 11-10-2018 IPR023214 HAD superfamily Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Gene3D G3DSA:2.70.150.20 291 407 1.3E-30 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 SUPERFAMILY SSF55008 85 158 4.06E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 726 751 6.6E-7 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 695 711 6.6E-7 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 SUPERFAMILY SSF81653 306 403 5.23E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Pfam PF00122 E1-E2 ATPase 304 480 1.8E-44 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 709 1.1E-33 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 240 797 9.2E-158 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Gene3D G3DSA:3.30.70.100 84 154 2.1E-8 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 SUPERFAMILY SSF56784 500 794 4.95E-47 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 781 6.3E-81 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 2.3E-23 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 653 2.3E-23 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 632 2.3E-23 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 2.3E-23 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 2.3E-23 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 2.3E-23 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 798 3.5E-153 T 11-10-2018 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 SUPERFAMILY SSF81665 276 778 7.06E-12 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 81 4.5E-19 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase Rmag_1028 01a1051cd61a70e0a6ba87859d2915a1 800 Gene3D G3DSA:3.40.1110.10 512 628 1.6E-73 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 SUPERFAMILY SSF52833 1 99 8.66E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 SUPERFAMILY SSF47616 77 196 5.18E-19 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 Gene3D G3DSA:1.20.1050.10 82 205 8.3E-22 T 11-10-2018 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 73 7.2E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 PRINTS PR01625 Omega-class glutathione S-transferase signature 138 157 5.9E-5 T 11-10-2018 IPR005442 Glutathione S-transferase, omega-class GO:0004364|GO:0005737 KEGG: 00053+1.8.5.1|KEGG: 00480+2.5.1.18+1.8.5.1|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-2261|MetaCyc: PWY-4061|MetaCyc: PWY-4202|MetaCyc: PWY-6370|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533|Reactome: R-HSA-156590|Reactome: R-HSA-196836 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 PRINTS PR01625 Omega-class glutathione S-transferase signature 74 88 5.9E-5 T 11-10-2018 IPR005442 Glutathione S-transferase, omega-class GO:0004364|GO:0005737 KEGG: 00053+1.8.5.1|KEGG: 00480+2.5.1.18+1.8.5.1|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-2261|MetaCyc: PWY-4061|MetaCyc: PWY-4202|MetaCyc: PWY-6370|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533|Reactome: R-HSA-156590|Reactome: R-HSA-196836 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 PRINTS PR01625 Omega-class glutathione S-transferase signature 1 15 5.9E-5 T 11-10-2018 IPR005442 Glutathione S-transferase, omega-class GO:0004364|GO:0005737 KEGG: 00053+1.8.5.1|KEGG: 00480+2.5.1.18+1.8.5.1|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-2261|MetaCyc: PWY-4061|MetaCyc: PWY-4202|MetaCyc: PWY-6370|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533|Reactome: R-HSA-156590|Reactome: R-HSA-196836 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 Gene3D G3DSA:3.40.30.10 3 81 2.0E-19 T 11-10-2018 Rmag_0325 054ee0a8bf7d7a15f4ec41b0288a0bab 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 185 1.9E-4 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Rmag_1075 ca1779dc42dafffaf112d574388a4093 121 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 7.1E-24 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Rmag_1075 ca1779dc42dafffaf112d574388a4093 121 Pfam PF03840 Preprotein translocase SecG subunit 6 74 6.4E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Rmag_1075 ca1779dc42dafffaf112d574388a4093 121 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 7.0E-33 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Rmag_1075 ca1779dc42dafffaf112d574388a4093 121 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 7.0E-33 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Rmag_1075 ca1779dc42dafffaf112d574388a4093 121 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 7.0E-33 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Rmag_1075 ca1779dc42dafffaf112d574388a4093 121 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 7.0E-33 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Rmag_0458 d071a298183164e8081429641d68ff62 883 Gene3D G3DSA:3.40.50.970 53 466 2.3E-128 T 11-10-2018 Rmag_0458 d071a298183164e8081429641d68ff62 883 Gene3D G3DSA:3.40.50.920 702 883 9.0E-71 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Rmag_0458 d071a298183164e8081429641d68ff62 883 Gene3D G3DSA:3.40.50.970 467 701 1.3E-101 T 11-10-2018 Rmag_0458 d071a298183164e8081429641d68ff62 883 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 882 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Rmag_0458 d071a298183164e8081429641d68ff62 883 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 133 291 1.1E-7 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0458 d071a298183164e8081429641d68ff62 883 SUPERFAMILY SSF52518 54 462 3.16E-137 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0458 d071a298183164e8081429641d68ff62 883 SUPERFAMILY SSF52922 697 882 1.26E-55 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Rmag_0458 d071a298183164e8081429641d68ff62 883 SUPERFAMILY SSF52518 469 695 9.07E-90 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0458 d071a298183164e8081429641d68ff62 883 PIRSF PIRSF000156 1 883 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 Pfam PF13522 Glutamine amidotransferase domain 67 209 3.2E-15 T 11-10-2018 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 Gene3D G3DSA:3.40.50.2020 279 443 1.8E-149 T 11-10-2018 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 PIRSF PIRSF000485 1 483 9.7E-164 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 Pfam PF00156 Phosphoribosyl transferase domain 280 395 2.5E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 Gene3D G3DSA:3.60.20.10 2 414 1.8E-149 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.1E-152 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 SUPERFAMILY SSF53271 252 483 3.8E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.518 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Rmag_1001 b2898d69d41bf3a063f74aa3fb8930d0 505 SUPERFAMILY SSF56235 2 259 7.46E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_0752 7c7ea12660491a5ba8a539978ae78c2b 138 Pfam PF06271 RDD family 9 132 1.9E-23 T 11-10-2018 IPR010432 RDD Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0022 T 11-10-2018 Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 SUPERFAMILY SSF51735 5 246 5.46E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.3E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.3E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.3E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.3E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 Gene3D G3DSA:3.40.50.720 1 247 7.2E-79 T 11-10-2018 Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 246 5.1E-98 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 3.9E-64 T 11-10-2018 Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0916 3cab6348f64b0841a861832ce14e6370 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0846 a67e483b63583beeb14441e63039ed88 119 Pfam PF02261 Aspartate decarboxylase 1 113 8.4E-43 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Rmag_0846 a67e483b63583beeb14441e63039ed88 119 PIRSF PIRSF006246 1 119 8.1E-44 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Rmag_0846 a67e483b63583beeb14441e63039ed88 119 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 119 58.242 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Rmag_0846 a67e483b63583beeb14441e63039ed88 119 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 115 2.0E-34 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Rmag_0846 a67e483b63583beeb14441e63039ed88 119 SUPERFAMILY SSF50692 1 116 9.82E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Rmag_0846 a67e483b63583beeb14441e63039ed88 119 Gene3D G3DSA:2.40.40.20 1 119 1.4E-44 T 11-10-2018 Rmag_0846 a67e483b63583beeb14441e63039ed88 119 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 116 3.0E-39 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Rmag_0020 91a565d7d08f90a4b25245b80a6ee1d6 395 SUPERFAMILY SSF53383 3 390 1.77E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0020 91a565d7d08f90a4b25245b80a6ee1d6 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Rmag_0020 91a565d7d08f90a4b25245b80a6ee1d6 395 Gene3D G3DSA:3.90.1150.10 44 385 7.7E-125 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0020 91a565d7d08f90a4b25245b80a6ee1d6 395 Gene3D G3DSA:3.40.640.10 46 285 7.7E-125 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0020 91a565d7d08f90a4b25245b80a6ee1d6 395 Pfam PF00155 Aminotransferase class I and II 32 369 4.6E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Rmag_0650 b7cd3e2e6f997c98e0f25fc6b0ac2e00 183 Pfam PF07603 Protein of unknown function (DUF1566) 40 179 1.1E-22 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 Gene3D G3DSA:3.10.50.30 76 158 1.7E-28 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 SUPERFAMILY SSF54534 82 157 2.62E-22 T 11-10-2018 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 SUPERFAMILY SSF46557 3 78 5.89E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 2.2E-53 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 PIRSF PIRSF006092 1 158 1.1E-49 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.9E-28 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.6E-27 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 30.272 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Rmag_0874 4b2e662fa9345fbcf76c659e91f06410 158 Gene3D G3DSA:1.10.287.180 1 75 9.8E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Rmag_0855 3739a6a24cd426d1c43e908e80ea5d3e 317 Gene3D G3DSA:1.20.1420.30 38 309 1.2E-83 T 11-10-2018 Rmag_0855 3739a6a24cd426d1c43e908e80ea5d3e 317 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 5 310 8.0E-72 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Rmag_0855 3739a6a24cd426d1c43e908e80ea5d3e 317 Pfam PF01699 Sodium/calcium exchanger protein 174 314 8.4E-24 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Rmag_0855 3739a6a24cd426d1c43e908e80ea5d3e 317 Pfam PF01699 Sodium/calcium exchanger protein 8 147 3.6E-27 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Rmag_0855 3739a6a24cd426d1c43e908e80ea5d3e 317 Gene3D G3DSA:1.20.58.1130 12 205 1.2E-83 T 11-10-2018 Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 Gene3D G3DSA:3.30.1330.30 1 77 7.0E-20 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 SUPERFAMILY SSF55315 2 76 8.71E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 SMART SM00967 6 82 5.4E-14 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 Pfam PF00588 SpoU rRNA Methylase family 99 238 8.3E-38 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 SUPERFAMILY SSF75217 91 246 2.09E-42 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 10 76 7.0E-14 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 245 1.5E-69 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Rmag_0537 2e9a2b0cc3ef083ac7a127ce1297532d 247 Gene3D G3DSA:3.40.1280.10 83 246 1.8E-54 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 Gene3D G3DSA:3.80.30.20 149 384 1.0E-75 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 444 71.311 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 SMART SM00729 151 371 8.8E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 7.1E-27 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 440 2.7E-139 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 Pfam PF01938 TRAM domain 382 442 1.2E-12 T 11-10-2018 IPR002792 TRAM domain Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 Gene3D G3DSA:3.40.50.12160 2 133 3.3E-30 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 443 8.9E-170 T 11-10-2018 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 SUPERFAMILY SSF102114 129 375 2.09E-54 T 11-10-2018 Rmag_0743 db5cb45184c37ccb45907ff8e76a2225 444 Pfam PF04055 Radical SAM superfamily 155 328 2.5E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 PIRSF PIRSF000726 52 407 2.7E-135 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 PIRSF PIRSF000726 1 63 1.2E-18 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 Pfam PF13840 ACT domain 337 399 1.0E-13 T 11-10-2018 IPR027795 CASTOR, ACT domain Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 SUPERFAMILY SSF55021 335 405 1.04E-21 T 11-10-2018 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 403 4.2E-113 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 Gene3D G3DSA:3.30.70.260 256 404 7.6E-52 T 11-10-2018 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 SUPERFAMILY SSF55021 249 328 8.4E-17 T 11-10-2018 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 Pfam PF01842 ACT domain 268 328 6.1E-9 T 11-10-2018 IPR002912 ACT domain Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 Gene3D G3DSA:3.30.70.260 261 339 7.6E-52 T 11-10-2018 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 SUPERFAMILY SSF53633 4 244 4.71E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 1.5E-124 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 Gene3D G3DSA:3.40.1160.10 1 255 1.7E-85 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0585 1c0bf465ba3520519c87be72aa1f5ad0 407 Pfam PF00696 Amino acid kinase family 3 229 2.3E-49 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Rmag_0439 bb6d6556963cb9ee4389fd73e81a4491 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 265 16.0 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Rmag_0439 bb6d6556963cb9ee4389fd73e81a4491 266 Pfam PF02673 Bacitracin resistance protein BacA 7 260 3.7E-70 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Rmag_0896 5fd9f2c65337a8a69374002aae3477cd 377 Pfam PF08484 C-methyltransferase C-terminal domain 283 372 5.2E-7 T 11-10-2018 IPR013691 C-methyltransferase Rmag_0896 5fd9f2c65337a8a69374002aae3477cd 377 Pfam PF13489 Methyltransferase domain 95 229 7.2E-10 T 11-10-2018 Rmag_0896 5fd9f2c65337a8a69374002aae3477cd 377 Gene3D G3DSA:3.40.50.150 68 237 2.4E-22 T 11-10-2018 Rmag_0896 5fd9f2c65337a8a69374002aae3477cd 377 Gene3D G3DSA:3.40.50.720 289 376 1.4E-6 T 11-10-2018 Rmag_0896 5fd9f2c65337a8a69374002aae3477cd 377 SUPERFAMILY SSF53335 84 241 1.31E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0889 fe53a9763f7d76d0dc44316166d9c051 247 Pfam PF00535 Glycosyl transferase family 2 4 129 1.1E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Rmag_0889 fe53a9763f7d76d0dc44316166d9c051 247 SUPERFAMILY SSF53448 2 214 8.68E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0889 fe53a9763f7d76d0dc44316166d9c051 247 Gene3D G3DSA:3.90.550.10 1 242 6.0E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Pfam PF00873 AcrB/AcrD/AcrF family 4 1000 1.4E-163 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:3.30.2090.10 692 779 1.4E-246 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 SUPERFAMILY SSF82714 695 774 2.49E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 SUPERFAMILY SSF82693 41 127 4.88E-20 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:3.30.2090.10 179 270 1.4E-246 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:3.30.70.1430 41 787 1.4E-246 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 SUPERFAMILY SSF82866 779 1003 2.35E-40 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:3.30.70.1440 641 838 1.4E-246 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 5.3E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.3E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.3E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.3E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.3E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 SUPERFAMILY SSF82714 183 266 1.44E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:1.20.1640.10 12 497 1.4E-246 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:3.30.70.1320 136 327 1.4E-246 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 SUPERFAMILY SSF82693 140 325 1.28E-10 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:3.30.70.1430 549 640 1.4E-246 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 SUPERFAMILY SSF82866 292 487 1.26E-35 T 11-10-2018 Rmag_0369 15e69a33ea276be57dadadccdbbcd45f 1017 Gene3D G3DSA:1.20.1640.10 498 998 1.4E-246 T 11-10-2018 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 Gene3D G3DSA:3.30.470.20 117 297 4.1E-111 T 11-10-2018 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 314 1.9E-124 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 142.066 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 Gene3D G3DSA:3.40.50.20 9 116 4.1E-111 T 11-10-2018 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 299 1.8E-70 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 SUPERFAMILY SSF56059 125 314 7.07E-50 T 11-10-2018 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 122 4.1E-42 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 Gene3D G3DSA:3.30.1490.20 139 203 4.1E-111 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Rmag_0051 89a775b3b1a5f8ff29b7e9ae5674b7b0 320 SUPERFAMILY SSF52440 4 124 7.19E-43 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_0745 109cb646a2f759a105bd7f00d09923af 155 Pfam PF04314 Copper chaperone PCu(A)C 33 135 1.4E-24 T 11-10-2018 IPR007410 Copper chaperone PCuAC Rmag_0745 109cb646a2f759a105bd7f00d09923af 155 Gene3D G3DSA:2.60.40.1890 36 150 3.7E-25 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily Rmag_0745 109cb646a2f759a105bd7f00d09923af 155 SUPERFAMILY SSF110087 5 146 1.57E-37 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily Rmag_1004 501873b41f58099e86d5eec760c2336f 405 SUPERFAMILY SSF53901 214 402 2.53E-57 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_1004 501873b41f58099e86d5eec760c2336f 405 SMART SM00825 Beta-ketoacyl synthase 4 405 9.7E-13 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Rmag_1004 501873b41f58099e86d5eec760c2336f 405 SUPERFAMILY SSF53901 1 250 2.03E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_1004 501873b41f58099e86d5eec760c2336f 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 4.3E-26 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Rmag_1004 501873b41f58099e86d5eec760c2336f 405 Gene3D G3DSA:3.40.47.10 259 405 4.3E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_1004 501873b41f58099e86d5eec760c2336f 405 Gene3D G3DSA:3.40.47.10 1 253 1.0E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_1004 501873b41f58099e86d5eec760c2336f 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.0E-42 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Rmag_1004 501873b41f58099e86d5eec760c2336f 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 5 306 35.982 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 PIRSF PIRSF000164 2 307 3.8E-77 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 Gene3D G3DSA:3.20.20.70 2 308 3.3E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 305 4.3E-101 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 SUPERFAMILY SSF51395 4 306 3.02E-75 T 11-10-2018 Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 Pfam PF01180 Dihydroorotate dehydrogenase 5 291 2.1E-69 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Rmag_0006 31559d48de8a9f3b5c5086c23211a073 312 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 SUPERFAMILY SSF50447 489 571 3.06E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Gene3D G3DSA:2.40.30.10 486 605 1.5E-38 T 11-10-2018 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Gene3D G3DSA:3.40.50.300 313 485 9.3E-69 T 11-10-2018 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 SUPERFAMILY SSF52156 593 722 1.44E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Gene3D G3DSA:3.40.50.10050 609 716 3.7E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Pfam PF11987 Translation-initiation factor 2 601 705 3.5E-33 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 813 16.151 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Gene3D G3DSA:2.40.30.10 717 813 1.4E-29 T 11-10-2018 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Pfam PF00009 Elongation factor Tu GTP binding domain 320 475 8.8E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 318 474 7.0E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 ProSitePatterns PS01176 Initiation factor 2 signature. 766 788 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Rmag_0054 df4c222fd1483794612b94830c2a4843 815 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 240 290 1.7E-12 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Rmag_0054 df4c222fd1483794612b94830c2a4843 815 SUPERFAMILY SSF50447 718 811 6.45E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0054 df4c222fd1483794612b94830c2a4843 815 SUPERFAMILY SSF52540 304 480 6.13E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0054 df4c222fd1483794612b94830c2a4843 815 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 234 814 4.3E-238 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 23.494 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 153 4.9E-56 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 SUPERFAMILY SSF55200 67 154 1.57E-29 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 Gene3D G3DSA:3.10.20.80 1 58 2.7E-24 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 SUPERFAMILY SSF54364 1 61 1.44E-21 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 Gene3D G3DSA:3.30.110.10 59 154 5.7E-33 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 59 2.6E-23 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Rmag_0647 c053e098c7a71480eb9dac8fe172e2ae 155 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 67 151 4.7E-34 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Rmag_0922 0ec8408292ae26383ec18142ca40971d 601 Pfam PF00773 RNB domain 220 496 1.1E-56 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Rmag_0922 0ec8408292ae26383ec18142ca40971d 601 Gene3D G3DSA:1.10.10.10 144 210 3.9E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0922 0ec8408292ae26383ec18142ca40971d 601 SUPERFAMILY SSF50249 169 538 5.43E-72 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0922 0ec8408292ae26383ec18142ca40971d 601 SMART SM00955 220 498 4.0E-67 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Rmag_0922 0ec8408292ae26383ec18142ca40971d 601 SUPERFAMILY SSF50249 542 601 1.71E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 5 225 6.1E-96 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 Pfam PF00318 Ribosomal protein S2 9 223 2.4E-85 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 157 181 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 Gene3D G3DSA:1.10.287.610 103 149 9.2E-84 T 11-10-2018 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 SUPERFAMILY SSF52313 6 235 2.62E-86 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 224 39.183 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 PRINTS PR00395 Ribosomal protein S2 signature 157 174 3.3E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.3E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 PRINTS PR00395 Ribosomal protein S2 signature 174 185 3.3E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.3E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.3E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 PRINTS PR00395 Ribosomal protein S2 signature 195 209 3.3E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Rmag_1072 8dedba21081c57fa847f2e0dffd9d16b 312 Gene3D G3DSA:3.40.50.10490 8 218 9.2E-84 T 11-10-2018 Rmag_0137 a354c0f97821e02e5bc6f0c2f09b2ed3 266 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0137 a354c0f97821e02e5bc6f0c2f09b2ed3 266 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0137 a354c0f97821e02e5bc6f0c2f09b2ed3 266 SUPERFAMILY SSF51717 4 264 2.49E-96 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0137 a354c0f97821e02e5bc6f0c2f09b2ed3 266 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 1.8E-96 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Rmag_0137 a354c0f97821e02e5bc6f0c2f09b2ed3 266 Gene3D G3DSA:3.20.20.20 1 266 1.0E-102 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0137 a354c0f97821e02e5bc6f0c2f09b2ed3 266 Pfam PF00809 Pterin binding enzyme 9 249 3.2E-83 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 SUPERFAMILY SSF52029 184 376 1.12E-80 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Rmag_0562 307fabe29d4b600553082f7030855ce6 544 PRINTS PR00298 60kDa chaperonin signature 27 53 6.4E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 PRINTS PR00298 60kDa chaperonin signature 350 375 6.4E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 PRINTS PR00298 60kDa chaperonin signature 398 419 6.4E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 PRINTS PR00298 60kDa chaperonin signature 268 291 6.4E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 PRINTS PR00298 60kDa chaperonin signature 83 110 6.4E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 Gene3D G3DSA:1.10.560.10 8 521 2.0E-229 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Rmag_0562 307fabe29d4b600553082f7030855ce6 544 Gene3D G3DSA:3.50.7.10 192 372 2.0E-229 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Rmag_0562 307fabe29d4b600553082f7030855ce6 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.7E-249 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 SUPERFAMILY SSF48592 6 521 4.2E-74 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Rmag_0562 307fabe29d4b600553082f7030855ce6 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 Gene3D G3DSA:3.30.260.10 136 410 2.0E-229 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Rmag_0562 307fabe29d4b600553082f7030855ce6 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.4E-93 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Rmag_0562 307fabe29d4b600553082f7030855ce6 544 SUPERFAMILY SSF54849 137 203 5.72E-23 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Rmag_0562 307fabe29d4b600553082f7030855ce6 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 40.232 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Rmag_0261 3340d632d69df56b595e14d083a4841a 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.1E-64 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Rmag_0261 3340d632d69df56b595e14d083a4841a 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.631 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Rmag_0261 3340d632d69df56b595e14d083a4841a 185 Gene3D G3DSA:3.30.1360.40 31 105 1.3E-62 T 11-10-2018 Rmag_0261 3340d632d69df56b595e14d083a4841a 185 SUPERFAMILY SSF55194 3 184 9.16E-66 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Rmag_0261 3340d632d69df56b595e14d083a4841a 185 Pfam PF01765 Ribosome recycling factor 20 183 1.5E-59 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Rmag_0261 3340d632d69df56b595e14d083a4841a 185 Gene3D G3DSA:1.10.132.20 12 182 1.3E-62 T 11-10-2018 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 ProSitePatterns PS00567 Phosphoribulokinase signature. 171 184 - T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 Gene3D G3DSA:3.40.50.300 1 295 4.4E-115 T 11-10-2018 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 SUPERFAMILY SSF52540 3 293 2.81E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 221 1.4E-68 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 PRINTS PR00478 Phosphoribulokinase family signature 171 188 1.4E-34 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.4E-34 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 PRINTS PR00478 Phosphoribulokinase family signature 189 212 1.4E-34 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Rmag_0004 4a27697da96a23958201c8560d0c9d40 295 PRINTS PR00478 Phosphoribulokinase family signature 133 151 1.4E-34 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Rmag_0990 581a203e2a64c4b5970776f717ca4acc 91 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.9E-25 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0990 581a203e2a64c4b5970776f717ca4acc 91 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 79 20.511 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0990 581a203e2a64c4b5970776f717ca4acc 91 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0990 581a203e2a64c4b5970776f717ca4acc 91 Gene3D G3DSA:3.30.1320.10 1 90 3.9E-27 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0990 581a203e2a64c4b5970776f717ca4acc 91 SUPERFAMILY SSF54565 1 81 6.28E-25 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0990 581a203e2a64c4b5970776f717ca4acc 91 Pfam PF00886 Ribosomal protein S16 8 69 2.0E-20 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 2.1E-9 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 193 2.1E-9 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 232 244 2.1E-9 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 135 152 2.1E-9 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 Pfam PF00365 Phosphofructokinase 8 319 3.3E-45 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 Gene3D G3DSA:3.40.50.460 140 382 1.0E-146 T 11-10-2018 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 PIRSF PIRSF036483 1 413 1.7E-192 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 SUPERFAMILY SSF53784 1 410 1.01E-104 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 Gene3D G3DSA:3.40.50.450 3 395 1.0E-146 T 11-10-2018 Rmag_0094 969699f538c401c449fa765a5a20f1e5 414 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 394 42.324 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Rmag_0304 a0f043f78b26de8b68661ef214b02b64 264 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 262 36.102 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Rmag_0304 a0f043f78b26de8b68661ef214b02b64 264 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 149 257 5.3E-31 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Rmag_0304 a0f043f78b26de8b68661ef214b02b64 264 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 257 1.2E-89 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Rmag_0304 a0f043f78b26de8b68661ef214b02b64 264 Gene3D G3DSA:3.10.270.10 4 261 6.8E-88 T 11-10-2018 Rmag_0036 a9f6e29bde099380a0dfab9201e30960 177 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 32 174 1.0E-46 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0036 a9f6e29bde099380a0dfab9201e30960 177 Gene3D G3DSA:2.60.370.10 54 177 3.2E-39 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0036 a9f6e29bde099380a0dfab9201e30960 177 PIRSF PIRSF005413 1 177 1.3E-55 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0036 a9f6e29bde099380a0dfab9201e30960 177 SUPERFAMILY SSF110111 56 176 3.92E-39 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0410 8dc9f252fb4e2f678541d6c265fbe7ef 622 Pfam PF13667 ThiC-associated domain 21 97 1.3E-31 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Rmag_0410 8dc9f252fb4e2f678541d6c265fbe7ef 622 Pfam PF01964 Radical SAM ThiC family 138 583 8.9E-198 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Rmag_0410 8dc9f252fb4e2f678541d6c265fbe7ef 622 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 136 585 4.4E-213 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Rmag_0410 8dc9f252fb4e2f678541d6c265fbe7ef 622 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 136 587 96.675 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Rmag_0410 8dc9f252fb4e2f678541d6c265fbe7ef 622 Gene3D G3DSA:3.20.20.540 205 518 4.2E-152 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 SUPERFAMILY SSF52954 328 420 4.58E-18 T 11-10-2018 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 Pfam PF03129 Anticodon binding domain 330 421 4.2E-9 T 11-10-2018 IPR004154 Anticodon-binding Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 3.8E-144 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 Pfam PF13393 Histidyl-tRNA synthetase 10 311 1.1E-44 T 11-10-2018 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 SUPERFAMILY SSF55681 4 317 2.49E-96 T 11-10-2018 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 PIRSF PIRSF001549 1 422 1.9E-114 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 Gene3D G3DSA:3.30.930.10 2 323 5.1E-112 T 11-10-2018 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 31.283 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Rmag_0671 85f91dddfd696f68fa2daccf2bd2eaf2 422 Gene3D G3DSA:3.40.50.800 327 422 1.7E-21 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Rmag_0240 1748c863b9c224c558058d92fd2861fa 417 Gene3D G3DSA:1.10.645.20 4 417 2.5E-172 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0240 1748c863b9c224c558058d92fd2861fa 417 SUPERFAMILY SSF56762 16 417 2.88E-135 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0240 1748c863b9c224c558058d92fd2861fa 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 1.7E-124 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0240 1748c863b9c224c558058d92fd2861fa 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0240 1748c863b9c224c558058d92fd2861fa 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 4.0E-180 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0240 1748c863b9c224c558058d92fd2861fa 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 48.74 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0400 be58ac3d0e14aed99d4216e5a81e9c7e 202 SUPERFAMILY SSF140478 28 178 2.75E-44 T 11-10-2018 IPR023353 LemA-like domain superfamily Rmag_0400 be58ac3d0e14aed99d4216e5a81e9c7e 202 Pfam PF04011 LemA family 11 186 3.1E-55 T 11-10-2018 IPR007156 LemA Rmag_0400 be58ac3d0e14aed99d4216e5a81e9c7e 202 Gene3D G3DSA:1.20.1440.20 19 198 1.6E-50 T 11-10-2018 IPR023353 LemA-like domain superfamily Rmag_0355 cdd0846df7a8edebaf14f8b73b8e6819 192 PIRSF PIRSF004553 8 191 6.3E-47 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Rmag_0355 cdd0846df7a8edebaf14f8b73b8e6819 192 SUPERFAMILY SSF53335 10 188 2.39E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0355 cdd0846df7a8edebaf14f8b73b8e6819 192 Gene3D G3DSA:3.40.50.150 4 191 1.1E-49 T 11-10-2018 Rmag_0355 cdd0846df7a8edebaf14f8b73b8e6819 192 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Rmag_0355 cdd0846df7a8edebaf14f8b73b8e6819 192 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 7 189 4.2E-49 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Rmag_0355 cdd0846df7a8edebaf14f8b73b8e6819 192 Pfam PF03602 Conserved hypothetical protein 95 10 189 1.2E-49 T 11-10-2018 Rmag_0235 0fc11bdf2a5ae7ea3d6fcd3afb846ba5 821 Pfam PF13116 Protein of unknown function 243 518 9.6E-48 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 Rmag_0235 0fc11bdf2a5ae7ea3d6fcd3afb846ba5 821 Pfam PF13502 AsmA-like C-terminal region 582 812 1.1E-29 T 11-10-2018 IPR032712 AsmA-like, C-terminal Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 Gene3D G3DSA:3.40.50.620 1 176 1.5E-67 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 8 274 3.8E-90 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 Hamap MF_00158 Pantothenate synthetase [panC]. 2 275 35.29 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 Gene3D G3DSA:3.30.1300.10 177 277 1.2E-25 T 11-10-2018 Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 SUPERFAMILY SSF52374 2 275 9.65E-96 T 11-10-2018 Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 67 2.6E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0416 30c59c576910358e101106e9bd6b6a75 278 Pfam PF02569 Pantoate-beta-alanine ligase 6 274 2.0E-93 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Gene3D G3DSA:1.20.120.790 489 616 4.2E-43 T 11-10-2018 IPR037196 HSP90, C-terminal domain Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 75 92 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 172 189 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 120 142 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 5 25 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 26 48 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 93 110 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PRINTS PR00775 90kDa heat shock protein signature 190 208 4.7E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 SMART SM00387 27 184 1.5E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Gene3D G3DSA:3.40.50.11260 395 484 5.8E-30 T 11-10-2018 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 616 31.26 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Pfam PF00183 Hsp90 protein 218 616 1.5E-124 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 SUPERFAMILY SSF55874 5 212 8.51E-64 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 SUPERFAMILY SSF54211 228 483 3.03E-89 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 167 1.7E-15 T 11-10-2018 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Gene3D G3DSA:3.30.230.80 228 394 3.0E-64 T 11-10-2018 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 PIRSF PIRSF002583 1 616 9.8E-211 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 Gene3D G3DSA:3.30.565.10 1 227 1.8E-73 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Rmag_0493 ad1e50fcde163dbef8fd266bec376903 616 SUPERFAMILY SSF110942 508 615 2.62E-36 T 11-10-2018 IPR037196 HSP90, C-terminal domain Rmag_0831 18aca85448c9740cdea0cafb7d6e3414 277 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 49.575 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Rmag_0831 18aca85448c9740cdea0cafb7d6e3414 277 SUPERFAMILY SSF51569 5 269 1.28E-102 T 11-10-2018 Rmag_0831 18aca85448c9740cdea0cafb7d6e3414 277 Gene3D G3DSA:3.20.20.70 3 275 1.0E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0831 18aca85448c9740cdea0cafb7d6e3414 277 Pfam PF00793 DAHP synthetase I family 11 267 2.0E-69 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Rmag_0831 18aca85448c9740cdea0cafb7d6e3414 277 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 9.9E-122 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Rmag_0749 ee21f907dcbab2ba93e5bc7acc866bc4 97 SUPERFAMILY SSF46992 14 97 4.97E-26 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0749 ee21f907dcbab2ba93e5bc7acc866bc4 97 Pfam PF01649 Ribosomal protein S20 13 95 8.6E-22 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0749 ee21f907dcbab2ba93e5bc7acc866bc4 97 TIGRFAM TIGR00029 S20: ribosomal protein bS20 12 96 1.6E-24 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0749 ee21f907dcbab2ba93e5bc7acc866bc4 97 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 23 97 5.0E-15 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0749 ee21f907dcbab2ba93e5bc7acc866bc4 97 Gene3D G3DSA:1.20.58.110 12 97 3.2E-25 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0749 ee21f907dcbab2ba93e5bc7acc866bc4 97 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 12 96 16.479 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 291 1.4E-105 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 PIRSF PIRSF001365 5 296 2.3E-86 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 292 62.871 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 2.7E-31 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 2.7E-31 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 2.7E-31 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 2.7E-31 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 Pfam PF00701 Dihydrodipicolinate synthetase family 7 291 5.7E-97 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 SUPERFAMILY SSF51569 7 294 5.65E-98 T 11-10-2018 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 Gene3D G3DSA:3.20.20.70 7 296 2.9E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0278 a02d1a2b906e330181a034d14125d3b1 296 SMART SM01130 6 294 4.2E-129 T 11-10-2018 IPR002220 DapA-like GO:0016829 Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 Gene3D G3DSA:3.40.50.2300 1 117 4.1E-7 T 11-10-2018 Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 Gene3D G3DSA:1.10.10.10 118 172 5.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 PIRSF PIRSF036382 1 174 2.9E-51 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 Pfam PF00072 Response regulator receiver domain 2 87 2.5E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 Pfam PF03861 ANTAR domain 115 167 3.7E-18 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 SUPERFAMILY SSF52172 1 167 7.26E-40 T 11-10-2018 IPR011006 CheY-like superfamily Rmag_0284 50fb6db63e1cd81588004e8f2ec7d93c 174 SMART SM01012 112 167 1.0E-22 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 Rmag_1042 fd3e90bed84f01552263c697eb9fbcf7 174 SMART SM00644 15 162 5.6E-40 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Rmag_1042 fd3e90bed84f01552263c697eb9fbcf7 174 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 163 1.9E-25 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Rmag_1042 fd3e90bed84f01552263c697eb9fbcf7 174 Gene3D G3DSA:3.40.80.10 1 174 6.4E-55 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Rmag_1042 fd3e90bed84f01552263c697eb9fbcf7 174 SUPERFAMILY SSF55846 3 172 7.59E-55 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Rmag_0698 6141facdb8955c050529edd7792def27 176 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 71 84 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Rmag_0698 6141facdb8955c050529edd7792def27 176 SMART SM00852 9 155 5.1E-21 T 11-10-2018 IPR001453 MoaB/Mog domain Rmag_0698 6141facdb8955c050529edd7792def27 176 Pfam PF00994 Probable molybdopterin binding domain 10 149 1.4E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Rmag_0698 6141facdb8955c050529edd7792def27 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 148 7.8E-39 T 11-10-2018 IPR001453 MoaB/Mog domain Rmag_0698 6141facdb8955c050529edd7792def27 176 Gene3D G3DSA:3.40.980.10 4 174 4.0E-54 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Rmag_0698 6141facdb8955c050529edd7792def27 176 SUPERFAMILY SSF53218 6 159 2.36E-40 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 SMART SM00739 3 30 0.005 T 11-10-2018 IPR005824 KOW Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 16.055 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 Pfam PF00467 KOW motif 8 34 2.0E-5 T 11-10-2018 IPR005824 KOW Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 Gene3D G3DSA:2.30.30.30 1 103 6.2E-29 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 SUPERFAMILY SSF50104 3 101 3.31E-25 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 102 2.4E-18 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0176 92eb788e3c2ec346a0072aca251282d7 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 7.1E-30 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0019 3de9c4474858e624519e77363467ef40 278 SUPERFAMILY SSF52540 14 178 5.82E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 432 30.355 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 SUPERFAMILY SSF53244 294 430 6.1E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 Pfam PF08245 Mur ligase middle domain 106 274 4.8E-28 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 Gene3D G3DSA:3.40.50.720 2 89 1.4E-17 T 11-10-2018 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 Gene3D G3DSA:3.90.190.20 295 429 3.9E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 3 429 1.5E-122 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 369 3.0E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 SUPERFAMILY SSF51984 3 90 2.88E-10 T 11-10-2018 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 SUPERFAMILY SSF53623 91 292 1.96E-49 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0766 2c4d31b9c758556d7e17b28f2806934c 433 Gene3D G3DSA:3.40.1190.10 90 294 1.9E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0159 13ac24d94ce82557c5fadab607188efd 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 134 4.9E-28 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Rmag_0159 13ac24d94ce82557c5fadab607188efd 147 SUPERFAMILY SSF52788 1 142 7.59E-39 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Rmag_0159 13ac24d94ce82557c5fadab607188efd 147 Gene3D G3DSA:3.40.50.2300 1 146 2.1E-42 T 11-10-2018 Rmag_0159 13ac24d94ce82557c5fadab607188efd 147 SMART SM00226 2 141 2.1E-23 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Rmag_0346 305760474d70712e4d709be7e1d5c1f0 457 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 443 37.685 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Rmag_0346 305760474d70712e4d709be7e1d5c1f0 457 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 424 1.5E-133 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.5E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.4E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.5E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.317 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 7.6E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.0E-221 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Gene3D G3DSA:2.40.30.10 208 336 1.1E-52 T 11-10-2018 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 SUPERFAMILY SSF50447 207 303 1.16E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Gene3D G3DSA:2.40.30.10 340 394 6.3E-29 T 11-10-2018 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 SUPERFAMILY SSF50465 304 395 1.8E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 Gene3D G3DSA:3.40.50.300 1 205 2.4E-70 T 11-10-2018 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.5E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 SUPERFAMILY SSF52540 6 221 6.13E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0818 4b97f86cb40805647a2a4714cdb63a72 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 26.721 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 Gene3D G3DSA:2.40.50.1030 6 84 8.0E-27 T 11-10-2018 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.9E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.9E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.9E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 SUPERFAMILY SSF110324 2 80 9.42E-33 T 11-10-2018 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 Pfam PF01016 Ribosomal L27 protein 2 81 1.5E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.6E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0918 c1674fe3c497707ee8948936a63d280c 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 3.0E-12 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 338 48.349 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 Pfam PF01409 tRNA synthetases class II core domain (F) 91 338 4.0E-102 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 Gene3D G3DSA:3.30.930.10 8 339 5.1E-118 T 11-10-2018 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 338 8.2E-102 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 3.0E-21 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 SUPERFAMILY SSF46589 15 99 3.45E-20 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Rmag_0643 c7a578c371d7ebcceed8052a401464af 339 SUPERFAMILY SSF55681 91 339 8.06E-79 T 11-10-2018 Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 214 32.986 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 210 2.7E-71 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 Gene3D G3DSA:2.40.50.620 33 102 2.8E-7 T 11-10-2018 Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 Gene3D G3DSA:2.40.30.10 135 217 6.0E-17 T 11-10-2018 Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 Pfam PF00297 Ribosomal protein L3 95 189 8.3E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0165 795cd739eb4e3f99602fe7416961c60a 238 SUPERFAMILY SSF50447 1 218 1.15E-65 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 8.5E-40 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 Gene3D G3DSA:3.40.50.920 540 661 5.4E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 Pfam PF02780 Transketolase, C-terminal domain 541 652 1.9E-11 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 3.8E-158 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 SUPERFAMILY SSF52922 534 660 8.85E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 659 2.5E-285 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 Gene3D G3DSA:3.40.50.970 327 538 2.7E-69 T 11-10-2018 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 SUPERFAMILY SSF52518 5 319 1.04E-109 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 Gene3D G3DSA:3.40.50.970 3 326 1.8E-123 T 11-10-2018 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 SMART SM00861 355 527 3.1E-54 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Rmag_0062 eb47eda90522e66cce3db705a2df2563 661 SUPERFAMILY SSF52518 347 526 6.87E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Pfam PF02824 TGS domain 4 61 1.9E-6 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Pfam PF03129 Anticodon binding domain 540 629 3.4E-20 T 11-10-2018 IPR004154 Anticodon-binding Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.7E-220 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Gene3D G3DSA:3.40.50.800 531 631 2.4E-30 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 8.8E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 SUPERFAMILY SSF55186 63 239 9.03E-65 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 8.8E-44 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 SUPERFAMILY SSF52954 529 631 6.04E-29 T 11-10-2018 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 SUPERFAMILY SSF55681 242 525 7.66E-96 T 11-10-2018 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 SUPERFAMILY SSF81271 3 61 3.17E-12 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 9.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 9.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 9.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 9.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 9.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Gene3D G3DSA:3.10.20.30 3 62 8.6E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 SMART SM00863 169 218 1.4E-22 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Gene3D G3DSA:3.30.54.20 130 186 5.7E-65 T 11-10-2018 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Gene3D G3DSA:3.30.980.10 69 221 5.7E-65 T 11-10-2018 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 632 33.0 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Rmag_0648 7fa5eb12333a1c9f0a6dd40b9a61747e 632 Gene3D G3DSA:3.30.930.10 222 530 2.1E-124 T 11-10-2018 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 113 123 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 230 369 1.0E-68 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Pfam PF02772 S-adenosylmethionine synthetase, central domain 111 228 3.8E-41 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Gene3D G3DSA:3.30.300.10 99 371 1.4E-173 T 11-10-2018 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 PIRSF PIRSF000497 1 377 9.0E-170 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 SUPERFAMILY SSF55973 107 229 2.2E-48 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 SUPERFAMILY SSF55973 2 106 6.67E-43 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 377 52.221 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Gene3D G3DSA:3.30.300.10 8 267 1.4E-173 T 11-10-2018 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 SUPERFAMILY SSF55973 230 376 1.29E-67 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 2 376 2.6E-178 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 256 264 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Gene3D G3DSA:3.30.300.10 2 230 1.4E-173 T 11-10-2018 Rmag_0738 2c8b0beb3f825631ea370b7e54c05e8e 377 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 97 3.7E-40 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 SMART SM00729 13 214 2.0E-5 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 331 35.801 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 Gene3D G3DSA:3.20.20.70 1 331 7.4E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 Pfam PF13353 4Fe-4S single cluster domain 20 123 2.1E-8 T 11-10-2018 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 331 2.2E-109 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 Pfam PF04055 Radical SAM superfamily 18 179 1.1E-23 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 SUPERFAMILY SSF102114 4 282 6.93E-66 T 11-10-2018 Rmag_0693 c42f7fdd096c857b3b8328b7651601cd 331 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 314 8.2E-34 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0663 8656e473e6de2cd1ad995c2ee8c13ce2 195 SUPERFAMILY SSF53955 9 192 5.62E-51 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Rmag_0663 8656e473e6de2cd1ad995c2ee8c13ce2 195 Pfam PF00912 Transglycosylase 14 185 8.3E-49 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0663 8656e473e6de2cd1ad995c2ee8c13ce2 195 Gene3D G3DSA:1.10.3810.10 13 195 1.7E-54 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0723 9eddfdc149e4eb486c1751d24f47e2ba 293 SUPERFAMILY SSF74653 193 292 3.63E-7 T 11-10-2018 Rmag_0723 9eddfdc149e4eb486c1751d24f47e2ba 293 Pfam PF13103 TonB C terminal 205 290 6.7E-7 T 11-10-2018 Rmag_0723 9eddfdc149e4eb486c1751d24f47e2ba 293 Gene3D G3DSA:3.30.1150.10 176 293 1.4E-16 T 11-10-2018 Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 SUPERFAMILY SSF100950 1 146 2.86E-43 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 218 31.429 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 Gene3D G3DSA:3.30.70.260 125 197 1.1E-72 T 11-10-2018 Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 216 5.0E-65 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 Gene3D G3DSA:3.40.50.1360 8 207 1.1E-72 T 11-10-2018 Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 SUPERFAMILY SSF75445 127 199 6.02E-20 T 11-10-2018 Rmag_0227 40bf18d0c2572a3499fe4261a6fa9210 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 214 2.7E-57 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 Gene3D G3DSA:3.30.1490.20 21 104 1.5E-85 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 SUPERFAMILY SSF56059 1 238 2.78E-66 T 11-10-2018 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 Pfam PF00549 CoA-ligase 262 378 6.3E-21 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 40.082 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 Gene3D G3DSA:3.40.50.261 240 386 1.6E-51 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.4E-147 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 PIRSF PIRSF001554 1 386 8.4E-144 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 Gene3D G3DSA:3.30.470.20 1 234 1.5E-85 T 11-10-2018 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 Pfam PF08442 ATP-grasp domain 3 202 1.3E-68 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Rmag_0146 e685d8d3cd8fab5239b72bc9042daa22 386 SUPERFAMILY SSF52210 239 385 6.02E-49 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Rmag_0349 80d1ed1aba25f8c45714020105e5be94 270 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 5 270 39.705 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Rmag_0349 80d1ed1aba25f8c45714020105e5be94 270 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 45 269 1.8E-70 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Rmag_0349 80d1ed1aba25f8c45714020105e5be94 270 Pfam PF02666 Phosphatidylserine decarboxylase 58 269 1.6E-61 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Rmag_0438 8153e3c83d545cf10c9074f4999c83b2 364 SUPERFAMILY SSF53335 9 355 3.87E-92 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0438 8153e3c83d545cf10c9074f4999c83b2 364 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 63 294 1.7E-41 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Rmag_0438 8153e3c83d545cf10c9074f4999c83b2 364 Gene3D G3DSA:3.40.50.12710 1 364 1.5E-111 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Rmag_0965 da502a9ab5e2ebe70bbce6d920683900 793 Gene3D G3DSA:1.20.1640.10 234 427 9.5E-7 T 11-10-2018 Rmag_0965 da502a9ab5e2ebe70bbce6d920683900 793 SUPERFAMILY SSF82866 638 790 2.88E-33 T 11-10-2018 Rmag_0965 da502a9ab5e2ebe70bbce6d920683900 793 Gene3D G3DSA:1.20.1640.10 609 792 2.8E-15 T 11-10-2018 Rmag_0965 da502a9ab5e2ebe70bbce6d920683900 793 SUPERFAMILY SSF82866 232 413 1.57E-29 T 11-10-2018 Rmag_0965 da502a9ab5e2ebe70bbce6d920683900 793 Pfam PF03176 MMPL family 212 416 3.5E-17 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Rmag_0965 da502a9ab5e2ebe70bbce6d920683900 793 Pfam PF03176 MMPL family 563 786 4.5E-16 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 35.327 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 Pfam PF01264 Chorismate synthase 10 345 2.4E-134 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 PIRSF PIRSF001456 3 360 1.5E-133 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 Gene3D G3DSA:3.60.150.10 1 362 1.8E-149 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 SUPERFAMILY SSF103263 4 352 2.09E-140 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0430 33d3f992fc446ab4856ebd8abe5f3351 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-133 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Pfam PF03454 MoeA C-terminal region (domain IV) 349 416 6.3E-14 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Pfam PF00994 Probable molybdopterin binding domain 208 332 4.6E-25 T 11-10-2018 IPR001453 MoaB/Mog domain Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 SUPERFAMILY SSF63882 17 190 6.41E-47 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 SMART SM00852 196 333 4.0E-37 T 11-10-2018 IPR001453 MoaB/Mog domain Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Gene3D G3DSA:3.40.980.10 191 342 1.5E-123 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 192 329 2.3E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Gene3D G3DSA:2.40.340.10 343 406 1.5E-123 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 269 302 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Gene3D G3DSA:3.90.105.10 38 190 1.5E-123 T 11-10-2018 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 SUPERFAMILY SSF63867 344 418 5.36E-15 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Gene3D G3DSA:2.170.190.11 61 157 1.5E-123 T 11-10-2018 Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 SUPERFAMILY SSF53218 193 337 3.93E-41 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Rmag_0691 50001b3c196325c29ab74752ddca7ccf 421 Pfam PF03453 MoeA N-terminal region (domain I and II) 19 183 8.4E-41 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 PIRSF PIRSF000114 1 322 8.3E-90 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 Gene3D G3DSA:3.40.50.720 1 179 4.5E-38 T 11-10-2018 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 Gene3D G3DSA:1.10.1040.10 180 322 1.2E-47 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 313 30.94 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 179 200 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 124 144 8.0E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 229 246 8.0E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 164 188 8.0E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 8.0E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 8.0E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 SUPERFAMILY SSF48179 171 322 3.57E-52 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 150 3.4E-27 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 SUPERFAMILY SSF51735 2 171 4.16E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0934 2dd0d2b3778bd29f1b46ed981f28d187 322 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 171 311 1.1E-49 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Gene3D G3DSA:3.30.1360.200 276 432 1.1E-39 T 11-10-2018 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 594 2.0E-73 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Gene3D G3DSA:3.30.70.3400 219 438 1.1E-39 T 11-10-2018 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 SUPERFAMILY SSF82866 330 605 3.66E-42 T 11-10-2018 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 601 2.6E-137 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Gene3D G3DSA:3.30.70.260 52 104 1.2E-6 T 11-10-2018 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Pfam PF07549 SecD/SecF GG Motif 114 138 7.7E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Pfam PF13721 SecD export protein N-terminal TM region 1 102 8.2E-32 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 615 43.21 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Gene3D G3DSA:1.20.1640.10 441 611 8.1E-6 T 11-10-2018 Rmag_1006 647d8daf3d31f201f59542d0e209baef 615 Pfam PF02355 Protein export membrane protein 433 603 1.5E-21 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Rmag_1068 4eca9ed1704300957301257d315e25d5 191 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Rmag_1068 4eca9ed1704300957301257d315e25d5 191 Pfam PF01195 Peptidyl-tRNA hydrolase 5 187 4.8E-54 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Rmag_1068 4eca9ed1704300957301257d315e25d5 191 SUPERFAMILY SSF53178 3 188 1.44E-64 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Rmag_1068 4eca9ed1704300957301257d315e25d5 191 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 8.6E-62 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Rmag_1068 4eca9ed1704300957301257d315e25d5 191 Gene3D G3DSA:3.40.50.1470 1 191 7.1E-67 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Rmag_1068 4eca9ed1704300957301257d315e25d5 191 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 181 33.67 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 1.2E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.2E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 1.2E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 1.2E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 239 15.474 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 220 3.2E-62 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 ProSitePatterns PS01218 TatC family signature. 153 172 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Rmag_0285 8a93ca4d4fe79566a3cb163854aded6e 288 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 225 2.1E-66 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 13 344 2.7E-112 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 347 9.7E-52 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 Gene3D G3DSA:3.40.140.10 2 141 3.6E-43 T 11-10-2018 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 105 6.1E-22 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 SUPERFAMILY SSF53597 150 345 2.13E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 SUPERFAMILY SSF53927 9 150 6.02E-44 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 Gene3D G3DSA:3.40.430.10 142 348 1.6E-57 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 Pfam PF01872 RibD C-terminal domain 153 343 5.2E-44 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Rmag_0800 e3a79a60043e1e3400bc3cb793751b12 349 PIRSF PIRSF006769 5 349 2.9E-113 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Rmag_0952 660b33a6ac202854bdc3fbd634bea5ae 246 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 244 8.4E-58 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Rmag_0952 660b33a6ac202854bdc3fbd634bea5ae 246 Gene3D G3DSA:3.40.1390.30 98 217 9.9E-77 T 11-10-2018 Rmag_0952 660b33a6ac202854bdc3fbd634bea5ae 246 SUPERFAMILY SSF102705 4 244 2.35E-73 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Rmag_0952 660b33a6ac202854bdc3fbd634bea5ae 246 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 3.0E-53 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Rmag_0952 660b33a6ac202854bdc3fbd634bea5ae 246 Gene3D G3DSA:3.40.1390.30 8 234 9.9E-77 T 11-10-2018 Rmag_0296 4b9970cdc0d8762516039b86d5777979 626 SUPERFAMILY SSF56601 232 616 5.01E-72 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Rmag_0296 4b9970cdc0d8762516039b86d5777979 626 Pfam PF00905 Penicillin binding protein transpeptidase domain 308 586 3.2E-54 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Rmag_0296 4b9970cdc0d8762516039b86d5777979 626 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 258 1.1E-14 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Rmag_0296 4b9970cdc0d8762516039b86d5777979 626 SUPERFAMILY SSF56519 62 281 6.02E-26 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Rmag_0296 4b9970cdc0d8762516039b86d5777979 626 Gene3D G3DSA:3.40.710.10 341 521 2.1E-74 T 11-10-2018 Rmag_0296 4b9970cdc0d8762516039b86d5777979 626 Gene3D G3DSA:3.30.450.330 282 614 2.1E-74 T 11-10-2018 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF52317 1021 1273 6.25E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF56042 418 644 1.79E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 574 6.7E-25 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Pfam PF02769 AIR synthase related protein, C-terminal domain 824 933 2.2E-7 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Gene3D G3DSA:3.40.50.880 967 1274 7.4E-124 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF55326 612 805 1.28E-56 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1273 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1024 1273 2.5E-98 T 11-10-2018 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Gene3D G3DSA:1.10.8.750 146 206 1.7E-22 T 11-10-2018 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF56042 812 1017 1.79E-44 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF82697 3 144 1.83E-32 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1274 19.974 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF55326 214 416 2.23E-55 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Gene3D G3DSA:3.30.1330.10 607 798 2.8E-18 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Gene3D G3DSA:3.30.1330.10 207 410 4.2E-39 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SMART SM01211 1024 1273 6.0E-136 T 11-10-2018 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 SUPERFAMILY SSF109736 149 213 8.37E-19 T 11-10-2018 Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Gene3D G3DSA:3.90.650.10 411 595 4.4E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0392 b97e55288196be35bcaea0dfe48ea5a0 1274 Gene3D G3DSA:3.90.650.10 800 966 5.6E-24 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 4.3E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 4.3E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 4.3E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 4.3E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 SUPERFAMILY SSF50621 253 412 2.51E-53 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 Gene3D G3DSA:2.40.37.10 13 407 4.0E-144 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 3.0E-24 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 Gene3D G3DSA:3.20.20.10 33 274 4.0E-144 T 11-10-2018 IPR029066 PLP-binding barrel Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 1.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 1.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 1.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 1.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.8E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 278 1.1E-67 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 SUPERFAMILY SSF51419 26 281 4.45E-77 T 11-10-2018 IPR029066 PLP-binding barrel Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.439 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Rmag_0103 7bd528c87a9f8ad14c0e2cd09f34ebe6 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 1.7E-158 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Rmag_1023 acb38fa60ada93bb20bc353440a84b16 306 Gene3D G3DSA:3.40.50.11270 12 96 4.7E-111 T 11-10-2018 Rmag_1023 acb38fa60ada93bb20bc353440a84b16 306 Pfam PF02401 LytB protein 3 279 7.3E-91 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Rmag_1023 acb38fa60ada93bb20bc353440a84b16 306 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 279 1.3E-96 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Rmag_1023 acb38fa60ada93bb20bc353440a84b16 306 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 36.461 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Rmag_1023 acb38fa60ada93bb20bc353440a84b16 306 Gene3D G3DSA:3.40.1010.20 97 193 4.7E-111 T 11-10-2018 Rmag_1023 acb38fa60ada93bb20bc353440a84b16 306 Gene3D G3DSA:3.40.1010.20 6 279 4.7E-111 T 11-10-2018 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 SUPERFAMILY SSF48179 173 280 1.7E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 234 256 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 174 277 2.9E-30 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 17 110 1.8E-18 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 15 278 24.942 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 Gene3D G3DSA:3.40.50.720 13 175 8.4E-52 T 11-10-2018 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 17 278 1.8E-76 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 SUPERFAMILY SSF51735 17 171 2.63E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 Gene3D G3DSA:1.10.3730.10 176 282 1.6E-35 T 11-10-2018 Rmag_0116 b9683fc84e1e7e2e99062bf9b9eab79a 286 PIRSF PIRSF000193 14 281 6.5E-76 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 SUPERFAMILY SSF52374 17 170 1.21E-29 T 11-10-2018 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 Gene3D G3DSA:3.40.50.620 1 180 6.3E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 Pfam PF01687 Riboflavin kinase 177 298 1.6E-31 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 PIRSF PIRSF004491 1 299 1.6E-95 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 Pfam PF06574 FAD synthetase 13 159 1.4E-43 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 298 3.5E-85 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 SUPERFAMILY SSF82114 167 299 5.89E-41 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 SMART SM00904 176 299 4.4E-50 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Rmag_0016 db7fdeb0ff8167d00647a5958df9b439 300 Gene3D G3DSA:2.40.30.30 181 299 1.2E-34 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Rmag_0450 eb3d20631534d68541b4f87630e02df2 139 SUPERFAMILY SSF52141 51 138 1.37E-5 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 SUPERFAMILY SSF52172 1 125 3.84E-32 T 11-10-2018 IPR011006 CheY-like superfamily Rmag_1012 ec206429323219ea4df70c999145dfeb 209 SUPERFAMILY SSF46894 140 206 1.53E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 SMART SM00421 145 202 6.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 Gene3D G3DSA:3.40.50.12740 1 207 9.6E-58 T 11-10-2018 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 SMART SM00448 1 112 6.7E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Rmag_1012 ec206429323219ea4df70c999145dfeb 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 202 3.8E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Rmag_1062 47b6e88c9744d4b1791f671de0888266 117 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 117 34.75 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Rmag_1062 47b6e88c9744d4b1791f671de0888266 117 SUPERFAMILY SSF89360 8 103 2.16E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_1062 47b6e88c9744d4b1791f671de0888266 117 Gene3D G3DSA:2.60.300.12 12 117 9.2E-35 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_1062 47b6e88c9744d4b1791f671de0888266 117 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 112 2.3E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Rmag_1062 47b6e88c9744d4b1791f671de0888266 117 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 117 1.1E-38 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Rmag_1062 47b6e88c9744d4b1791f671de0888266 117 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 98 115 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.7E-130 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 SUPERFAMILY SSF52374 1 312 4.83E-96 T 11-10-2018 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 SMART SM00840 345 406 2.0E-22 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 461 4.9E-177 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 4.1E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 4.1E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 4.1E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 4.1E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 SUPERFAMILY SSF47323 316 461 1.31E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 Gene3D G3DSA:3.40.50.620 1 305 2.4E-132 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 Pfam PF09190 DALR domain 345 406 1.2E-18 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 462 38.117 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Rmag_0097 6782ce432018ee9d5eb1f72284efd0f1 462 Gene3D G3DSA:1.20.120.640 306 462 4.7E-40 T 11-10-2018 Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 SUPERFAMILY SSF52540 144 524 7.96E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 Pfam PF04851 Type III restriction enzyme, res subunit 123 286 4.6E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 SMART SM00487 121 318 2.8E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 Pfam PF00271 Helicase conserved C-terminal domain 430 513 3.3E-6 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 Gene3D G3DSA:1.10.8.630 3 108 2.3E-31 T 11-10-2018 Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 654 22.497 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 Gene3D G3DSA:3.40.50.300 114 301 1.0E-67 T 11-10-2018 Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 SMART SM00490 417 514 3.0E-7 T 11-10-2018 IPR001650 Helicase, C-terminal Rmag_0120 48cc8bb4f4b5e1a80095922a1129a4f2 654 TIGRFAM TIGR00595 priA: primosomal protein N' 147 653 4.2E-173 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 PRINTS PR00124 ATP synthase C subunit signature 30 45 2.4E-10 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 PRINTS PR00124 ATP synthase C subunit signature 9 28 2.4E-10 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 PRINTS PR00124 ATP synthase C subunit signature 47 72 2.4E-10 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 Pfam PF00137 ATP synthase subunit C 9 71 9.2E-9 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 SUPERFAMILY SSF81333 3 74 4.45E-17 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 72 14.298 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 Gene3D G3DSA:1.20.20.10 1 76 7.3E-30 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1050 16ed0f47c56d70323c5e0c99cbef4731 77 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 74 5.6E-29 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Rmag_0805 cba2d47d08cd8b1aa6739657c3d23562 271 SUPERFAMILY SSF46626 163 267 2.35E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0805 cba2d47d08cd8b1aa6739657c3d23562 271 PIRSF PIRSF038455 1 271 6.8E-83 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Rmag_0805 cba2d47d08cd8b1aa6739657c3d23562 271 Gene3D G3DSA:1.10.760.10 46 266 1.2E-49 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0805 cba2d47d08cd8b1aa6739657c3d23562 271 Gene3D G3DSA:1.10.760.10 71 151 1.2E-49 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0805 cba2d47d08cd8b1aa6739657c3d23562 271 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 69 271 1.9E-62 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 Pfam PF04551 GcpE protein 13 352 1.9E-131 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 SUPERFAMILY SSF56014 266 351 1.54E-10 T 11-10-2018 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 4.3E-129 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 Gene3D G3DSA:3.20.20.20 2 261 2.5E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 SUPERFAMILY SSF51717 17 208 5.02E-11 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.045 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 Gene3D G3DSA:3.30.413.10 262 357 3.1E-25 T 11-10-2018 Rmag_0384 8d7bb2a398b562428fc7214721d58d06 358 PIRSF PIRSF004640 1 357 1.4E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 Gene3D G3DSA:3.90.226.10 194 369 5.5E-91 T 11-10-2018 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 Pfam PF13180 PDZ domain 107 180 2.4E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 SUPERFAMILY SSF50156 103 183 9.55E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 Gene3D G3DSA:3.30.750.44 42 347 5.5E-91 T 11-10-2018 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 62 382 3.8E-98 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 SMART SM00228 107 178 2.9E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 Gene3D G3DSA:2.30.42.10 107 193 5.5E-91 T 11-10-2018 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 SUPERFAMILY SSF52096 44 375 2.98E-78 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 SMART SM00245 179 372 3.1E-73 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Rmag_0620 6299dcdfca697d2713c022a1644a546f 450 Pfam PF03572 Peptidase family S41 204 370 5.4E-56 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 Pfam PF00574 Clp protease 18 197 5.1E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 198 42.991 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 SUPERFAMILY SSF52096 16 195 6.84E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 Gene3D G3DSA:3.90.226.10 1 198 3.9E-80 T 11-10-2018 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 95 106 - T 11-10-2018 IPR018215 ClpP, Ser active site Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 PRINTS PR00127 Clp protease catalytic subunit P signature 95 112 9.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 PRINTS PR00127 Clp protease catalytic subunit P signature 173 192 9.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 PRINTS PR00127 Clp protease catalytic subunit P signature 64 84 9.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 9.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 PRINTS PR00127 Clp protease catalytic subunit P signature 116 135 9.4E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0205 f8ca33f58d5d5363b9cd92e06b0cc1d8 198 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 7 197 2.7E-99 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Rmag_0891 38daeec40be791e24079d6a976c7f8f9 254 Gene3D G3DSA:3.90.550.10 1 239 5.4E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0891 38daeec40be791e24079d6a976c7f8f9 254 SUPERFAMILY SSF53448 6 204 5.69E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0891 38daeec40be791e24079d6a976c7f8f9 254 Pfam PF00535 Glycosyl transferase family 2 9 149 1.7E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Rmag_0415 c3c5608f8ad4d756a22382978659c79e 260 SUPERFAMILY SSF51621 2 260 4.32E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Rmag_0415 c3c5608f8ad4d756a22382978659c79e 260 Pfam PF02548 Ketopantoate hydroxymethyltransferase 2 255 1.1E-98 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Rmag_0415 c3c5608f8ad4d756a22382978659c79e 260 PIRSF PIRSF000388 1 260 1.2E-89 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Rmag_0415 c3c5608f8ad4d756a22382978659c79e 260 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 8 260 7.1E-98 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Rmag_0415 c3c5608f8ad4d756a22382978659c79e 260 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 1 260 39.27 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Rmag_0415 c3c5608f8ad4d756a22382978659c79e 260 Gene3D G3DSA:3.20.20.60 1 260 2.0E-98 T 11-10-2018 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 Gene3D G3DSA:1.20.58.410 1 115 6.5E-24 T 11-10-2018 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 SMART SM00937 84 194 3.8E-47 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 Gene3D G3DSA:3.30.160.20 225 320 3.3E-94 T 11-10-2018 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 Pfam PF00472 RF-1 domain 228 336 8.9E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 Pfam PF03462 PCRF domain 30 219 1.9E-53 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 362 1.4E-152 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 364 37.646 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 SUPERFAMILY SSF75620 31 362 1.15E-125 T 11-10-2018 Rmag_0292 bfe71ffcecf6bb399858aa898edc4c19 364 Gene3D G3DSA:3.30.70.1660 129 357 3.3E-94 T 11-10-2018 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 ProSitePatterns PS00760 Signal peptidases I lysine active site. 168 180 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 ProSitePatterns PS00761 Signal peptidases I signature 3. 246 259 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 Pfam PF10502 Signal peptidase, peptidase S26 239 278 2.4E-5 T 11-10-2018 IPR019533 Peptidase S26 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 Gene3D G3DSA:2.170.230.10 177 240 3.3E-63 T 11-10-2018 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 Pfam PF00717 Peptidase S24-like 102 193 1.3E-20 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 241 260 1.0E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 96 112 1.0E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 166 178 1.0E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 83 280 3.4E-50 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 ProSitePatterns PS00501 Signal peptidases I serine active site. 105 112 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 SUPERFAMILY SSF51306 94 285 5.49E-63 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Rmag_0621 ffbc4cfea93ef74366c7a34fbcbb12b2 294 Gene3D G3DSA:2.10.109.10 94 281 3.3E-63 T 11-10-2018 Rmag_0073 269dbb191660e4a563a4ed2f698497bb 273 Gene3D G3DSA:1.20.120.1780 155 273 1.4E-10 T 11-10-2018 Rmag_0073 269dbb191660e4a563a4ed2f698497bb 273 Pfam PF01040 UbiA prenyltransferase family 12 253 5.9E-58 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Rmag_0073 269dbb191660e4a563a4ed2f698497bb 273 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 272 26.31 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Rmag_0073 269dbb191660e4a563a4ed2f698497bb 273 Gene3D G3DSA:1.10.357.140 9 154 1.1E-39 T 11-10-2018 Rmag_0073 269dbb191660e4a563a4ed2f698497bb 273 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 1 271 2.0E-92 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Rmag_1038 044a5460e763fe3d94fb6c38780d6386 106 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 10 84 1.0E-11 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Rmag_1038 044a5460e763fe3d94fb6c38780d6386 106 Pfam PF00825 Ribonuclease P 10 103 9.7E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Rmag_1038 044a5460e763fe3d94fb6c38780d6386 106 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 104 5.8E-15 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Rmag_1038 044a5460e763fe3d94fb6c38780d6386 106 SUPERFAMILY SSF54211 10 104 7.33E-18 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_1038 044a5460e763fe3d94fb6c38780d6386 106 Gene3D G3DSA:3.30.230.10 8 106 2.1E-22 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0245 f3261785bfc70607412af5aa7a81785c 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 3.4E-45 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0245 f3261785bfc70607412af5aa7a81785c 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 149 27.533 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0245 f3261785bfc70607412af5aa7a81785c 163 SUPERFAMILY SSF54862 37 140 6.28E-26 T 11-10-2018 Rmag_0245 f3261785bfc70607412af5aa7a81785c 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0245 f3261785bfc70607412af5aa7a81785c 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 1.9E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0245 f3261785bfc70607412af5aa7a81785c 163 Gene3D G3DSA:3.30.70.3270 37 163 3.8E-39 T 11-10-2018 Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 SUPERFAMILY SSF53901 3 252 1.2E-72 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 SUPERFAMILY SSF53901 215 411 1.94E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 PIRSF PIRSF000447 1 412 3.4E-176 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 6.0E-191 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 Gene3D G3DSA:3.40.47.10 1 255 3.6E-85 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.8E-35 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 245 4.5E-57 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.9E-13 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Rmag_0566 e68e76b3902d2bb4b9873e8e630dd8f7 412 Gene3D G3DSA:3.40.47.10 257 401 2.4E-51 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 4.9E-29 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 481 5.9E-167 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 SUPERFAMILY SSF56322 14 481 6.41E-149 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 PRINTS PR00095 Anthranilate synthase component I signature 321 334 3.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 PRINTS PR00095 Anthranilate synthase component I signature 415 429 3.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 PRINTS PR00095 Anthranilate synthase component I signature 335 348 3.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 PRINTS PR00095 Anthranilate synthase component I signature 430 444 3.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 Gene3D G3DSA:3.60.120.10 1 484 2.3E-167 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Rmag_0809 c9460d7414c22850a571c8795c05c278 484 Pfam PF00425 chorismate binding enzyme 219 473 1.2E-96 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 SUPERFAMILY SSF55979 127 245 5.9E-27 T 11-10-2018 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 SMART SM00480 17 363 2.9E-86 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 Gene3D G3DSA:3.10.150.10 1 243 5.6E-96 T 11-10-2018 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 SUPERFAMILY SSF55979 247 367 4.4E-27 T 11-10-2018 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 244 1.3E-32 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 Gene3D G3DSA:3.70.10.10 137 365 5.6E-96 T 11-10-2018 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.6E-89 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 SUPERFAMILY SSF55979 1 116 5.84E-22 T 11-10-2018 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 6.9E-22 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 PIRSF PIRSF000804 1 367 5.7E-96 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Rmag_0002 d172646a2cdd47d28daedb0ce58cde8d 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.6E-20 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Rmag_0213 04cc0b25d9cc12a601fdff6e5db84eeb 206 Pfam PF03625 Domain of unknown function DUF302 109 168 1.3E-10 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Rmag_0213 04cc0b25d9cc12a601fdff6e5db84eeb 206 SUPERFAMILY SSF103247 76 199 6.15E-22 T 11-10-2018 IPR035923 TT1751-like domain superfamily Rmag_0213 04cc0b25d9cc12a601fdff6e5db84eeb 206 Gene3D G3DSA:3.30.310.70 71 197 3.8E-5 T 11-10-2018 IPR035923 TT1751-like domain superfamily Rmag_1037 47a3c8c9cdf39d133a2a818231d47aab 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1037 47a3c8c9cdf39d133a2a818231d47aab 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 15.853 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1037 47a3c8c9cdf39d133a2a818231d47aab 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 4 46 1.8E-22 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1037 47a3c8c9cdf39d133a2a818231d47aab 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 34 1.0E-8 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1037 47a3c8c9cdf39d133a2a818231d47aab 46 Pfam PF00468 Ribosomal protein L34 4 46 4.3E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 129 139 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 24 559 3.7E-222 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 Gene3D G3DSA:3.50.30.80 381 529 1.4E-48 T 11-10-2018 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 SUPERFAMILY SSF52016 382 559 2.04E-55 T 11-10-2018 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 SUPERFAMILY SSF143975 6 379 1.57E-134 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 Pfam PF00920 Dehydratase family 41 556 8.5E-209 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Rmag_0529 315b520f2c07e81a4289c4f3dc546a95 559 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 11 559 43.399 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 384 459 5.4E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 SUPERFAMILY SSF53738 166 267 3.22E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 SUPERFAMILY SSF53738 20 149 1.04E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Gene3D G3DSA:3.40.120.10 11 163 3.0E-51 T 11-10-2018 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Gene3D G3DSA:3.40.120.10 261 379 9.1E-41 T 11-10-2018 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 181 200 4.1E-23 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 244 259 4.1E-23 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 110 124 4.1E-23 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 215 228 4.1E-23 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 270 378 6.1E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 167 264 1.4E-26 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Gene3D G3DSA:3.40.120.10 183 260 5.9E-31 T 11-10-2018 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 22 148 1.2E-31 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 SUPERFAMILY SSF53738 269 376 6.67E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 SUPERFAMILY SSF55957 380 464 8.37E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Rmag_0456 666cd5fba9dc4a690edb2c34ab0fdb3a 471 Gene3D G3DSA:3.30.310.50 380 471 1.6E-27 T 11-10-2018 Rmag_0484 c54c3a677325c0fbcd7bc38c21bf2454 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 139.297 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Rmag_0484 c54c3a677325c0fbcd7bc38c21bf2454 339 Gene3D G3DSA:3.40.718.10 1 339 9.0E-119 T 11-10-2018 Rmag_0484 c54c3a677325c0fbcd7bc38c21bf2454 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 334 2.7E-100 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Rmag_0484 c54c3a677325c0fbcd7bc38c21bf2454 339 SUPERFAMILY SSF53659 3 333 1.03E-94 T 11-10-2018 Rmag_0484 c54c3a677325c0fbcd7bc38c21bf2454 339 PIRSF PIRSF002465 1 339 1.7E-119 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Rmag_0484 c54c3a677325c0fbcd7bc38c21bf2454 339 Pfam PF02504 Fatty acid synthesis protein 3 316 6.5E-99 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Rmag_0662 db7f80caa9c81fd969f985053dd153d1 219 Pfam PF00814 Glycoprotease family 34 130 6.5E-18 T 11-10-2018 IPR000905 Gcp-like domain Rmag_0662 db7f80caa9c81fd969f985053dd153d1 219 SUPERFAMILY SSF53067 2 99 1.62E-21 T 11-10-2018 Rmag_0662 db7f80caa9c81fd969f985053dd153d1 219 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 210 3.9E-42 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Rmag_0662 db7f80caa9c81fd969f985053dd153d1 219 Gene3D G3DSA:3.30.420.40 95 179 1.4E-49 T 11-10-2018 Rmag_0662 db7f80caa9c81fd969f985053dd153d1 219 SUPERFAMILY SSF53067 110 208 1.55E-14 T 11-10-2018 Rmag_0662 db7f80caa9c81fd969f985053dd153d1 219 Gene3D G3DSA:3.30.420.40 4 213 1.4E-49 T 11-10-2018 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 SUPERFAMILY SSF55681 116 423 7.46E-93 T 11-10-2018 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 37.942 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 6.8E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 6.8E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 6.8E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 6.8E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 6.8E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 SUPERFAMILY SSF46589 1 112 2.62E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 PIRSF PIRSF001529 1 429 1.6E-165 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 2.1E-156 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 Gene3D G3DSA:3.30.930.10 105 429 1.0E-108 T 11-10-2018 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 405 4.2E-32 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.6E-20 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Rmag_1008 2a79f4363a8c792f3562dbbf9a302e4f 429 Gene3D G3DSA:1.10.287.40 1 104 9.8E-14 T 11-10-2018 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 SUPERFAMILY SSF52540 57 395 5.04E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Gene3D G3DSA:3.40.50.300 54 310 9.6E-104 T 11-10-2018 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Gene3D G3DSA:1.10.8.60 311 419 4.8E-34 T 11-10-2018 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 1 410 49.741 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 305 5.4E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 407 8.1E-188 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 SMART SM01086 312 407 2.1E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 SUPERFAMILY SSF57716 8 43 4.42E-10 T 11-10-2018 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 384 1.4E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 SMART SM00994 7 46 8.0E-19 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 SMART SM00382 106 267 2.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Gene3D G3DSA:3.30.50.30 1 46 2.7E-16 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Rmag_0206 96896131762d8f0b66f67eb76b812c75 421 Pfam PF06689 ClpX C4-type zinc finger 9 45 7.6E-17 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Rmag_0590 3e408eae9b0df4c4b7f067e800ffa57f 102 Pfam PF04241 Protein of unknown function (DUF423) 19 102 3.6E-19 T 11-10-2018 IPR006696 Protein of unknown function DUF423 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Gene3D G3DSA:3.90.580.10 3 100 2.0E-32 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 PIRSF PIRSF002811 3 593 1.8E-141 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 SUPERFAMILY SSF57783 2 96 5.1E-32 T 11-10-2018 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Pfam PF10410 DnaB-helicase binding domain of primase 368 421 2.8E-6 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Gene3D G3DSA:1.20.50.20 367 420 6.1E-5 T 11-10-2018 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Pfam PF01807 CHC2 zinc finger 7 99 4.7E-34 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 SMART SM00400 35 89 6.5E-30 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 SMART SM00493 258 329 1.8E-19 T 11-10-2018 IPR006171 TOPRIM domain Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Gene3D G3DSA:3.90.980.10 106 239 3.8E-38 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 250 8.8E-39 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Hamap MF_00974 DNA primase [dnaG]. 3 574 26.707 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Gene3D G3DSA:3.40.1360.10 240 366 1.6E-43 T 11-10-2018 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 SUPERFAMILY SSF56731 114 420 7.32E-98 T 11-10-2018 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 TIGRFAM TIGR01391 dnaG: DNA primase 7 415 3.9E-135 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Rmag_0295 4dc45f810424bf39f52c751169087f00 593 Pfam PF13662 Toprim domain 259 335 6.1E-17 T 11-10-2018 IPR006171 TOPRIM domain Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 SUPERFAMILY SSF81301 44 152 6.04E-17 T 11-10-2018 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 Gene3D G3DSA:1.10.3090.10 353 629 7.0E-9 T 11-10-2018 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 Pfam PF01966 HD domain 433 527 2.2E-10 T 11-10-2018 IPR006674 HD domain Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 PIRSF PIRSF006288 3 839 4.9E-256 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 SUPERFAMILY SSF55021 768 821 1.42E-7 T 11-10-2018 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 839 244.828 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 Pfam PF08335 GlnD PII-uridylyltransferase 161 298 3.6E-37 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 31 838 3.2E-233 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 SUPERFAMILY SSF81593 182 296 1.33E-10 T 11-10-2018 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 SMART SM00471 426 573 2.0E-5 T 11-10-2018 IPR003607 HD/PDEase domain Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 SUPERFAMILY SSF81891 354 573 3.92E-14 T 11-10-2018 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 SUPERFAMILY SSF55021 666 742 1.21E-5 T 11-10-2018 Rmag_0475 3fa46d5a16211dd48b5ef365960b47e7 839 Pfam PF01909 Nucleotidyltransferase domain 53 92 3.3E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 Gene3D G3DSA:3.30.1390.10 55 125 8.1E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 125 2.0E-18 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 2.2E-42 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.2E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 43 1.6E-14 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 Gene3D G3DSA:1.20.5.710 3 54 1.2E-18 T 11-10-2018 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 125 23.252 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 SUPERFAMILY SSF48300 5 61 2.49E-12 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0812 0c142caa02407407c4ce1b64e2066e7b 125 SUPERFAMILY SSF54736 55 125 1.36E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rmag_0421 2edab4acf66123416aebc45a16bda55b 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 154 199 6.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Rmag_0421 2edab4acf66123416aebc45a16bda55b 253 SUPERFAMILY SSF56784 1 222 8.14E-35 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0421 2edab4acf66123416aebc45a16bda55b 253 Gene3D G3DSA:3.40.50.1000 5 218 4.2E-60 T 11-10-2018 IPR023214 HAD superfamily Rmag_0421 2edab4acf66123416aebc45a16bda55b 253 Gene3D G3DSA:1.10.150.240 17 97 4.2E-60 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Rmag_0421 2edab4acf66123416aebc45a16bda55b 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 198 1.2E-24 T 11-10-2018 Rmag_0378 17b4ccb6018cafade0ebcdf21f919bd5 143 Gene3D G3DSA:3.30.530.20 1 143 9.6E-36 T 11-10-2018 IPR023393 START-like domain superfamily Rmag_0378 17b4ccb6018cafade0ebcdf21f919bd5 143 SUPERFAMILY SSF55961 1 142 9.43E-29 T 11-10-2018 Rmag_0378 17b4ccb6018cafade0ebcdf21f919bd5 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.5E-25 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 SUPERFAMILY SSF81442 22 527 2.62E-188 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 Gene3D G3DSA:1.20.210.10 11 533 8.4E-213 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 475 1.4E-146 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 24 49 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 141 153 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 219 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 71 94 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 403 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 251 272 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 122 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 342 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 171 189 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 356 374 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 312 4.3E-120 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 253 307 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0035 12859537efa500e9348d9a95bead749e 538 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 25 526 6.8E-208 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 SUPERFAMILY SSF52402 348 608 1.3E-72 T 11-10-2018 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 SUPERFAMILY SSF56317 97 333 1.7E-55 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 98 626 27.415 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 Pfam PF02540 NAD synthase 352 600 1.3E-70 T 11-10-2018 IPR022310 NAD/GMP synthase Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 130 145 - T 11-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 Pfam PF00795 Carbon-nitrogen hydrolase 102 334 2.4E-28 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 TIGRFAM TIGR00552 nadE: NAD+ synthetase 359 607 4.7E-61 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 PIRSF PIRSF006630 342 626 4.0E-114 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 PIRSF PIRSF006630 95 349 1.9E-75 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 Gene3D G3DSA:3.60.110.10 89 344 4.6E-84 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 SUPERFAMILY SSF47413 6 64 2.65E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 Gene3D G3DSA:1.10.260.40 2 77 1.1E-5 T 11-10-2018 Rmag_0520 be9d9a8121fd56280af56c3d1ec443c4 626 Gene3D G3DSA:3.40.50.620 350 626 7.4E-108 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 SUPERFAMILY SSF52021 5 140 2.09E-55 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 Gene3D G3DSA:3.50.30.20 2 151 2.5E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 SUPERFAMILY SSF52317 153 371 1.83E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 373 44.403 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00097 Anthranilate synthase component II signature 261 272 2.4E-6 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00097 Anthranilate synthase component II signature 233 242 2.4E-6 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00097 Anthranilate synthase component II signature 346 359 2.4E-6 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 Pfam PF00117 Glutamine amidotransferase class-I 193 369 2.3E-45 T 11-10-2018 IPR017926 Glutamine amidotransferase Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 2.3E-11 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 2.3E-11 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 2.3E-11 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 Gene3D G3DSA:3.40.50.880 152 373 7.4E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.2E-51 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 8.0E-39 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 8.0E-39 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 8.0E-39 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 8.0E-39 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 8.0E-39 T 11-10-2018 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 SMART SM01097 3 133 1.3E-84 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0877 84e7bdb4cff090c1d55aeafe0f8d34e1 373 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 372 3.1E-142 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0454 7916285b047f10b3d59769742f2967a8 98 SUPERFAMILY SSF69754 2 97 4.45E-30 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Rmag_0454 7916285b047f10b3d59769742f2967a8 98 Gene3D G3DSA:3.30.160.100 1 98 3.6E-33 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Rmag_0454 7916285b047f10b3d59769742f2967a8 98 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 2.4E-22 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Rmag_0454 7916285b047f10b3d59769742f2967a8 98 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 6.9E-27 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 PIRSF PIRSF005303 2 309 3.3E-82 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 309 24.981 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 Gene3D G3DSA:3.90.650.10 141 309 9.8E-42 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 291 6.1E-90 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 Gene3D G3DSA:3.30.1330.10 1 140 1.6E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 SUPERFAMILY SSF55326 3 134 1.15E-30 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 133 9.6E-21 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Rmag_0419 c2b8f14d8f14db0f69e014120bc6152e 309 SUPERFAMILY SSF56042 139 289 9.57E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0905 7f2f656869bcfbfd79ba381d56a591d1 234 SUPERFAMILY SSF53448 2 233 1.21E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 SUPERFAMILY SSF52161 1 140 6.54E-58 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 Pfam PF00572 Ribosomal protein L13 15 138 1.1E-55 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 1.2E-60 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.65 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 Gene3D G3DSA:3.90.1180.10 1 142 2.0E-62 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 PIRSF PIRSF002181 1 142 8.5E-50 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Rmag_0936 7a2f06e4c69f92c08588a18b2d35e844 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 SUPERFAMILY SSF56053 1 86 3.4E-19 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 180 34.658 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 Pfam PF00347 Ribosomal protein L6 11 86 2.6E-11 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 Pfam PF00347 Ribosomal protein L6 94 167 1.1E-17 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 PRINTS PR00059 Ribosomal protein L6 signature 103 119 8.4E-29 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 PRINTS PR00059 Ribosomal protein L6 signature 145 166 8.4E-29 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 PRINTS PR00059 Ribosomal protein L6 signature 75 100 8.4E-29 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 158 166 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 SUPERFAMILY SSF56053 87 181 3.17E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 PIRSF PIRSF002162 1 181 8.6E-47 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 Gene3D G3DSA:3.90.930.12 1 86 2.9E-26 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 Gene3D G3DSA:3.90.930.12 87 181 6.7E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0180 4c384c8689993adbc6006337906fae1e 181 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 180 3.7E-68 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 SMART SM00382 174 359 9.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 SUPERFAMILY SSF52540 94 374 9.41E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 164 367 2.0E-24 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 SMART SM00357 56 122 1.2E-15 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Gene3D G3DSA:1.10.720.10 4 51 1.8E-12 T 11-10-2018 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Gene3D G3DSA:3.40.50.300 134 421 3.1E-126 T 11-10-2018 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 TIGRFAM TIGR00767 rho: transcription termination factor Rho 6 421 1.1E-200 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Gene3D G3DSA:2.40.50.140 52 127 1.2E-30 T 11-10-2018 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Pfam PF07497 Rho termination factor, RNA-binding domain 56 128 5.0E-29 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 SUPERFAMILY SSF68912 5 50 1.69E-9 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 424 227.091 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 Pfam PF07498 Rho termination factor, N-terminal domain 9 51 1.9E-12 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 SMART SM00959 9 51 8.8E-13 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Rmag_0477 1168d4186673f541b78a8f8c0510423f 424 SUPERFAMILY SSF50249 52 128 2.74E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SUPERFAMILY SSF54106 470 514 1.7E-9 T 11-10-2018 Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SMART SM00257 402 446 1.6E-10 T 11-10-2018 IPR018392 LysM domain Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SMART SM00257 328 371 1.8E-10 T 11-10-2018 IPR018392 LysM domain Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SMART SM00257 471 515 2.8E-6 T 11-10-2018 IPR018392 LysM domain Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Gene3D G3DSA:3.10.350.10 315 383 4.8E-13 T 11-10-2018 IPR036779 LysM domain superfamily Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Gene3D G3DSA:3.10.350.10 388 457 2.4E-14 T 11-10-2018 IPR036779 LysM domain superfamily Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SUPERFAMILY SSF53955 96 245 5.4E-43 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Gene3D G3DSA:1.10.530.10 77 249 1.7E-32 T 11-10-2018 Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Pfam PF01464 Transglycosylase SLT domain 111 209 2.7E-23 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SUPERFAMILY SSF54106 326 372 1.2E-9 T 11-10-2018 Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 117 145 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Pfam PF01476 LysM domain 403 445 6.2E-11 T 11-10-2018 IPR018392 LysM domain Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Pfam PF01476 LysM domain 329 371 5.0E-9 T 11-10-2018 IPR018392 LysM domain Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Pfam PF01476 LysM domain 472 514 4.9E-10 T 11-10-2018 IPR018392 LysM domain Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 SUPERFAMILY SSF54106 401 446 3.14E-10 T 11-10-2018 Rmag_0762 59e83ec8c8e8db774cbe3315fede50d6 524 Gene3D G3DSA:3.10.350.10 467 517 1.6E-13 T 11-10-2018 IPR036779 LysM domain superfamily Rmag_0050 2519f3d881c7acda7b5ed41ad8083e1a 130 TIGRFAM TIGR00494 crcB: protein CrcB 8 123 6.0E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Rmag_0050 2519f3d881c7acda7b5ed41ad8083e1a 130 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.4E-19 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Rmag_0050 2519f3d881c7acda7b5ed41ad8083e1a 130 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 16.806 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 PIRSF PIRSF000521 156 381 1.7E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 PIRSF PIRSF000521 2 145 9.1E-11 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 206 243 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 Gene3D G3DSA:3.40.640.10 43 290 1.2E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 Pfam PF00202 Aminotransferase class-III 6 377 3.2E-112 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 Gene3D G3DSA:3.90.1150.10 2 366 1.2E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 381 63.458 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 1 377 9.7E-138 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Rmag_0453 544e61d6f90ff8394cbff230ffb2ed2c 381 SUPERFAMILY SSF53383 2 378 2.19E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0608 b746ca75b02e84b95c7636b9f3e2ba8e 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 227 5.6E-89 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Rmag_0608 b746ca75b02e84b95c7636b9f3e2ba8e 234 SUPERFAMILY SSF53335 10 230 2.01E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0608 b746ca75b02e84b95c7636b9f3e2ba8e 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 233 37.971 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Rmag_0608 b746ca75b02e84b95c7636b9f3e2ba8e 234 Gene3D G3DSA:3.40.50.150 8 232 3.2E-71 T 11-10-2018 Rmag_0608 b746ca75b02e84b95c7636b9f3e2ba8e 234 Pfam PF13489 Methyltransferase domain 49 198 2.9E-21 T 11-10-2018 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 SUPERFAMILY SSF55021 1 76 1.08E-21 T 11-10-2018 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 Gene3D G3DSA:3.30.70.260 1 79 6.4E-32 T 11-10-2018 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 154 5.4E-55 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 8.0E-28 T 11-10-2018 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 Pfam PF10369 Small subunit of acetolactate synthase 84 154 2.2E-21 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 Gene3D G3DSA:3.30.70.1150 80 155 9.9E-23 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 Pfam PF13710 ACT domain 13 73 3.5E-15 T 11-10-2018 Rmag_0446 f168bbb647e1e3c3b200685e72547b73 158 SUPERFAMILY SSF55021 79 154 1.02E-19 T 11-10-2018 Rmag_0040 60ac885c18cd880c635304088afa1ba9 243 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 75 214 8.2E-66 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Rmag_0040 60ac885c18cd880c635304088afa1ba9 243 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 76 215 1.1E-68 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Rmag_0040 60ac885c18cd880c635304088afa1ba9 243 Gene3D G3DSA:1.10.760.10 75 237 5.7E-68 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0040 60ac885c18cd880c635304088afa1ba9 243 SUPERFAMILY SSF46626 21 230 5.51E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 SUPERFAMILY SSF50156 84 165 1.01E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 Pfam PF02163 Peptidase family M50 9 432 5.5E-76 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 445 6.1E-116 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 Gene3D G3DSA:2.30.42.10 219 299 7.9E-18 T 11-10-2018 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 Pfam PF13180 PDZ domain 209 281 2.1E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 Gene3D G3DSA:2.30.42.10 125 213 6.8E-8 T 11-10-2018 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 SUPERFAMILY SSF50156 207 287 1.08E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 SMART SM00228 116 184 0.53 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Rmag_0552 861f09eca2ca39bdf1d887e8d18850fd 445 SMART SM00228 208 277 4.7E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Rmag_0058 1eaf88e21355955aee88c79986eea8f1 252 Pfam PF04972 BON domain 48 116 1.9E-4 T 11-10-2018 IPR007055 BON domain Rmag_0058 1eaf88e21355955aee88c79986eea8f1 252 Pfam PF04972 BON domain 127 190 1.3E-5 T 11-10-2018 IPR007055 BON domain Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 SUPERFAMILY SSF53720 28 429 5.69E-82 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PIRSF PIRSF000099 2 432 3.1E-161 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 110 137 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 PRINTS PR00083 Histidinol dehydrogenase signature 202 227 3.3E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 429 40.461 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 Gene3D G3DSA:3.40.50.1980 235 351 2.1E-127 T 11-10-2018 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 428 4.3E-160 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 Gene3D G3DSA:3.40.50.1980 31 233 2.1E-127 T 11-10-2018 Rmag_0602 cfb73af992d74ff05c9c02b6abfb5189 435 Pfam PF00815 Histidinol dehydrogenase 27 428 3.5E-168 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Rmag_0755 a5a387f1d10bd71a1514f514f62a5e03 239 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 235 2.0E-62 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Rmag_0755 a5a387f1d10bd71a1514f514f62a5e03 239 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 111 118 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Rmag_0755 a5a387f1d10bd71a1514f514f62a5e03 239 Gene3D G3DSA:3.90.550.10 3 234 1.5E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0755 a5a387f1d10bd71a1514f514f62a5e03 239 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 234 40.198 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Rmag_0755 a5a387f1d10bd71a1514f514f62a5e03 239 SUPERFAMILY SSF53448 5 235 1.31E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0755 a5a387f1d10bd71a1514f514f62a5e03 239 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 233 4.3E-62 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 Gene3D G3DSA:3.40.50.300 159 335 1.0E-50 T 11-10-2018 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 Pfam PF01926 50S ribosome-binding GTPase 161 283 6.0E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 2.4E-131 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 Hamap MF_01454 GTPase Obg [obg]. 2 332 45.001 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 323 1.0E-11 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 Gene3D G3DSA:2.70.210.12 1 158 7.7E-54 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 Pfam PF01018 GTP1/OBG 4 157 2.4E-53 T 11-10-2018 IPR006169 GTP1/OBG domain Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 SUPERFAMILY SSF82051 2 157 1.7E-50 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 PIRSF PIRSF002401 1 335 4.7E-128 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 6.5E-32 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 6.5E-32 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 6.5E-32 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 6.5E-32 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0412 a1e1382348743937a6625a4eefd19c18 335 SUPERFAMILY SSF52540 151 333 1.75E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0286 61d9373b5775bd579ed9e80d922931e3 93 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 2.2E-18 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Rmag_0286 61d9373b5775bd579ed9e80d922931e3 93 Pfam PF02416 mttA/Hcf106 family 4 48 7.6E-9 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Rmag_0286 61d9373b5775bd579ed9e80d922931e3 93 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.7E-16 T 11-10-2018 Rmag_0286 61d9373b5775bd579ed9e80d922931e3 93 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.7E-16 T 11-10-2018 Rmag_0286 61d9373b5775bd579ed9e80d922931e3 93 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.7E-16 T 11-10-2018 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Gene3D G3DSA:3.90.199.10 30 481 2.1E-168 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 2 742 31.915 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 466 3.3E-125 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 7 741 0.0 T 11-10-2018 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 SUPERFAMILY SSF101904 497 740 7.59E-43 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 681 3.0E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 SMART SM00434 9 459 3.8E-207 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Gene3D G3DSA:2.120.10.90 499 728 2.0E-9 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Gene3D G3DSA:1.10.268.10 367 452 2.1E-168 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 SUPERFAMILY SSF56719 29 481 9.02E-146 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Rmag_0302 55b8635a63d17ec6349a9cfe0ba66439 745 Gene3D G3DSA:3.30.1360.40 236 329 2.1E-168 T 11-10-2018 Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 Gene3D G3DSA:1.20.1560.10 29 345 1.7E-101 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 SMART SM00382 380 566 7.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 SUPERFAMILY SSF90123 23 337 4.19E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 Gene3D G3DSA:3.40.50.300 346 598 5.8E-92 T 11-10-2018 Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 Pfam PF00664 ABC transporter transmembrane region 36 308 3.9E-30 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 Pfam PF00005 ABC transporter 371 520 4.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 SUPERFAMILY SSF52540 346 590 3.97E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0799 d2df6355602be98a23e80a4734ff74a5 598 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0677 b21e1e57e661b5460f07b5572e9cbc9a 354 Gene3D G3DSA:1.20.970.10 7 75 1.1E-13 T 11-10-2018 Rmag_0677 b21e1e57e661b5460f07b5572e9cbc9a 354 Gene3D G3DSA:3.40.1030.10 81 354 1.1E-46 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0677 b21e1e57e661b5460f07b5572e9cbc9a 354 SUPERFAMILY SSF47648 10 73 1.28E-11 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0677 b21e1e57e661b5460f07b5572e9cbc9a 354 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 73 1.4E-10 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0677 b21e1e57e661b5460f07b5572e9cbc9a 354 Pfam PF00591 Glycosyl transferase family, a/b domain 98 351 1.0E-11 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0677 b21e1e57e661b5460f07b5572e9cbc9a 354 SUPERFAMILY SSF52418 84 354 1.57E-37 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0600 a52ef11b18975b6e0863b54afc5b77d1 419 Gene3D G3DSA:3.65.10.10 6 414 1.4E-160 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Rmag_0600 a52ef11b18975b6e0863b54afc5b77d1 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.6E-170 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0600 a52ef11b18975b6e0863b54afc5b77d1 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 407 5.5E-103 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Rmag_0600 a52ef11b18975b6e0863b54afc5b77d1 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 42.42 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0600 a52ef11b18975b6e0863b54afc5b77d1 419 SUPERFAMILY SSF55205 1 418 8.76E-137 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Rmag_0600 a52ef11b18975b6e0863b54afc5b77d1 419 Gene3D G3DSA:3.65.10.10 21 229 1.4E-160 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Rmag_0534 6b0a78c816de812fb61b4ff20d37990e 383 Pfam PF01145 SPFH domain / Band 7 family 73 263 3.7E-24 T 11-10-2018 IPR001107 Band 7 domain Rmag_0534 6b0a78c816de812fb61b4ff20d37990e 383 Pfam PF12221 Bacterial membrane protein N terminal 1 39 7.8E-9 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal Rmag_0534 6b0a78c816de812fb61b4ff20d37990e 383 Gene3D G3DSA:3.30.479.30 135 250 7.1E-19 T 11-10-2018 Rmag_0534 6b0a78c816de812fb61b4ff20d37990e 383 SUPERFAMILY SSF117892 138 254 2.62E-21 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Rmag_0534 6b0a78c816de812fb61b4ff20d37990e 383 TIGRFAM TIGR01933 hflK: HflK protein 71 349 4.1E-96 T 11-10-2018 IPR010201 HflK GO:0016021 Rmag_0534 6b0a78c816de812fb61b4ff20d37990e 383 SMART SM00244 69 248 7.2E-28 T 11-10-2018 IPR001107 Band 7 domain Rmag_0121 3e505f6e3dd7caacb9d0db2e1e903d79 145 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 143 21.654 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Rmag_0121 3e505f6e3dd7caacb9d0db2e1e903d79 145 Gene3D G3DSA:3.40.390.30 2 145 1.2E-44 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Rmag_0121 3e505f6e3dd7caacb9d0db2e1e903d79 145 Pfam PF02130 Uncharacterized protein family UPF0054 20 138 1.6E-33 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Rmag_0121 3e505f6e3dd7caacb9d0db2e1e903d79 145 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 35 140 5.8E-34 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Rmag_0121 3e505f6e3dd7caacb9d0db2e1e903d79 145 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 109 119 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Rmag_0121 3e505f6e3dd7caacb9d0db2e1e903d79 145 SUPERFAMILY SSF55486 5 145 4.76E-43 T 11-10-2018 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 630 4.7E-210 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 826 1.6E-281 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Gene3D G3DSA:1.10.730.20 631 914 2.6E-88 T 11-10-2018 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 SUPERFAMILY SSF47323 643 913 8.6E-74 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Gene3D G3DSA:3.90.740.10 195 400 1.2E-238 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 3.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 3.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 231 254 3.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 393 408 3.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 913 20.848 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Gene3D G3DSA:3.40.50.620 28 620 1.2E-238 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Pfam PF08264 Anticodon-binding domain of tRNA 676 826 1.3E-30 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 Pfam PF06827 Zinc finger found in FPG and IleRS 883 910 1.9E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 SUPERFAMILY SSF52374 4 638 8.45E-135 T 11-10-2018 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0340 1664ce4eb39bca761ba45ea5be139166 922 SUPERFAMILY SSF50677 204 395 1.47E-57 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 Pfam PF00177 Ribosomal protein S7p/S5e 2 150 3.1E-64 T 11-10-2018 IPR023798 Ribosomal protein S7 domain Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 157 1.8E-66 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 157 35.341 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 SUPERFAMILY SSF47973 5 150 4.06E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 PIRSF PIRSF002122 2 157 2.2E-60 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Rmag_0161 318dea2c0588f9ebd0661fe57882f147 157 Gene3D G3DSA:1.10.455.10 1 156 4.5E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Gene3D G3DSA:3.30.1360.120 5 229 2.8E-80 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 PIRSF PIRSF006487 1 356 5.2E-83 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 251 3.2E-80 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Gene3D G3DSA:3.30.70.1400 50 137 2.8E-80 T 11-10-2018 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 SUPERFAMILY SSF103025 1 276 2.51E-86 T 11-10-2018 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Gene3D G3DSA:2.40.30.110 276 358 1.7E-26 T 11-10-2018 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 261 348 5.6E-16 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 353 1.3E-123 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Gene3D G3DSA:4.10.1250.10 230 274 1.5E-16 T 11-10-2018 Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 SUPERFAMILY SSF101790 270 355 9.32E-22 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Rmag_0924 f7bea2beb6073cf5c7bc91f16d276d6e 358 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 353 41.703 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Rmag_0279 e1cea05e0432fad99ac4bd54d336a257 371 Pfam PF06804 NlpB/DapX lipoprotein 39 350 1.9E-25 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 Pfam PF09397 Ftsk gamma domain 688 748 1.2E-26 T 11-10-2018 IPR018541 FtsK gamma domain Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 19 186 4.7E-31 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 SMART SM00843 686 751 1.1E-35 T 11-10-2018 IPR018541 FtsK gamma domain Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 SUPERFAMILY SSF46785 687 749 1.06E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 SUPERFAMILY SSF52540 332 653 5.58E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 Gene3D G3DSA:1.10.10.10 683 747 1.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 Pfam PF01580 FtsK/SpoIIIE family 360 581 2.4E-59 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 Gene3D G3DSA:3.30.980.40 252 356 6.2E-33 T 11-10-2018 Rmag_0043 8d0a3b67f9195b2acc1506e93ec76118 755 Gene3D G3DSA:3.40.50.300 357 667 2.0E-106 T 11-10-2018 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 8.6E-168 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 SMART SM00788 4 432 7.3E-260 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 Gene3D G3DSA:3.90.170.10 267 438 2.6E-63 T 11-10-2018 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 SUPERFAMILY SSF52540 3 437 9.03E-166 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 1.6E-168 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 Gene3D G3DSA:3.40.440.10 6 249 1.8E-94 T 11-10-2018 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 193.446 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Rmag_0531 64b8a71ad67df52317411eee1a1a102f 438 Gene3D G3DSA:1.10.300.10 102 201 1.8E-94 T 11-10-2018 Rmag_0397 abfaa4c635e96a419b4485ce75409753 200 Pfam PF04367 Protein of unknown function (DUF502) 59 163 1.6E-34 T 11-10-2018 IPR007462 Protein of unknown function DUF502 Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 Gene3D G3DSA:3.30.465.10 190 276 6.6E-22 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 Pfam PF00571 CBS domain 135 184 5.4E-6 T 11-10-2018 IPR000644 CBS domain Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 Pfam PF00571 CBS domain 63 121 3.5E-8 T 11-10-2018 IPR000644 CBS domain Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 Pfam PF03471 Transporter associated domain 203 275 7.5E-17 T 11-10-2018 IPR005170 Transporter-associated domain Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 SMART SM01091 199 277 7.1E-19 T 11-10-2018 IPR005170 Transporter-associated domain Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 SUPERFAMILY SSF56176 198 276 1.09E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 SUPERFAMILY SSF54631 59 202 5.56E-33 T 11-10-2018 Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 Gene3D G3DSA:3.10.580.10 45 189 1.4E-48 T 11-10-2018 Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 SMART SM00116 136 184 0.013 T 11-10-2018 IPR000644 CBS domain Rmag_0975 4c6857357462a116f267c2ef5db6aa07 282 SMART SM00116 72 121 0.0052 T 11-10-2018 IPR000644 CBS domain Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 SMART SM00363 3 65 3.0E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 Pfam PF00849 RNA pseudouridylate synthase 67 195 7.8E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 229 2.8E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 Gene3D G3DSA:3.10.290.10 1 57 2.5E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 Gene3D G3DSA:3.30.2350.10 61 242 3.8E-49 T 11-10-2018 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 SUPERFAMILY SSF55174 4 95 4.71E-10 T 11-10-2018 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 Pfam PF01479 S4 domain 4 37 9.6E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 SUPERFAMILY SSF55120 67 235 3.04E-42 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0339 7ba93aaa4b9270a7ad44749ddeb79a74 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 SUPERFAMILY SSF52402 4 245 1.41E-56 T 11-10-2018 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 Pfam PF03054 tRNA methyl transferase 9 359 1.2E-131 T 11-10-2018 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 359 7.9E-134 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 360 37.227 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 Gene3D G3DSA:2.30.30.280 214 280 1.1E-22 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 Gene3D G3DSA:2.40.30.10 282 363 1.8E-27 T 11-10-2018 Rmag_0747 d7372870dfa39875bae63d3406d5556e 363 Gene3D G3DSA:3.40.50.620 1 212 4.1E-88 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 SUPERFAMILY SSF100934 502 613 3.61E-30 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 SUPERFAMILY SSF53067 199 375 1.04E-45 T 11-10-2018 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Gene3D G3DSA:3.30.420.40 193 359 3.7E-108 T 11-10-2018 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Pfam PF00012 Hsp70 protein 21 598 1.6E-171 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 210 220 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 383 402 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 358 378 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 464 480 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 327 343 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 PRINTS PR00301 70kDa heat shock protein signature 151 171 2.2E-56 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Gene3D G3DSA:3.30.420.40 22 372 3.7E-108 T 11-10-2018 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Gene3D G3DSA:3.90.640.10 237 309 3.7E-108 T 11-10-2018 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 SUPERFAMILY SSF100920 381 533 8.11E-47 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Gene3D G3DSA:1.20.1270.10 518 613 4.3E-21 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Gene3D G3DSA:2.60.34.10 377 515 2.1E-46 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 614 39.1 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 SUPERFAMILY SSF53067 19 195 3.76E-50 T 11-10-2018 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Rmag_0573 caf0887a7fb89a232d8f9a822bf695ba 614 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 613 8.9E-244 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Rmag_0692 b9a6b7165a3b0c9f63216765ed070cc2 160 Pfam PF01967 MoaC family 15 150 1.6E-51 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0692 b9a6b7165a3b0c9f63216765ed070cc2 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 34.456 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0692 b9a6b7165a3b0c9f63216765ed070cc2 160 Gene3D G3DSA:3.30.70.640 1 160 9.1E-67 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0692 b9a6b7165a3b0c9f63216765ed070cc2 160 SUPERFAMILY SSF55040 11 155 1.44E-57 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0692 b9a6b7165a3b0c9f63216765ed070cc2 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.5E-62 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Rmag_0320 983b0c986ade5718db852b953232d659 718 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 1.4E-76 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Rmag_0320 983b0c986ade5718db852b953232d659 718 Pfam PF13361 UvrD-like helicase C-terminal domain 278 610 4.7E-69 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Rmag_0320 983b0c986ade5718db852b953232d659 718 Gene3D G3DSA:1.10.486.10 383 541 7.3E-113 T 11-10-2018 Rmag_0320 983b0c986ade5718db852b953232d659 718 Gene3D G3DSA:3.40.50.300 282 628 7.3E-113 T 11-10-2018 Rmag_0320 983b0c986ade5718db852b953232d659 718 Gene3D G3DSA:1.10.10.160 115 188 7.4E-93 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Rmag_0320 983b0c986ade5718db852b953232d659 718 SUPERFAMILY SSF52540 5 637 9.78E-166 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0320 983b0c986ade5718db852b953232d659 718 Gene3D G3DSA:3.40.50.300 10 273 7.4E-93 T 11-10-2018 Rmag_0105 e8b508b0952ca1f4d7b7a704f0ab0c04 375 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 14 374 33.338 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Rmag_0105 e8b508b0952ca1f4d7b7a704f0ab0c04 375 Gene3D G3DSA:3.40.50.2000 180 306 1.6E-5 T 11-10-2018 Rmag_0105 e8b508b0952ca1f4d7b7a704f0ab0c04 375 Pfam PF02684 Lipid-A-disaccharide synthetase 17 351 5.1E-98 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Rmag_0105 e8b508b0952ca1f4d7b7a704f0ab0c04 375 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 14 362 7.7E-95 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Rmag_0105 e8b508b0952ca1f4d7b7a704f0ab0c04 375 SUPERFAMILY SSF53756 16 302 4.65E-20 T 11-10-2018 Rmag_0881 5adab9ed8a83592caca3fb0464f29490 96 SUPERFAMILY SSF69721 2 96 5.36E-28 T 11-10-2018 IPR025526 DsrC-like domain superfamily Rmag_0881 5adab9ed8a83592caca3fb0464f29490 96 Gene3D G3DSA:1.10.10.370 33 96 1.4E-12 T 11-10-2018 Rmag_0881 5adab9ed8a83592caca3fb0464f29490 96 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 96 1.1E-16 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0881 5adab9ed8a83592caca3fb0464f29490 96 Pfam PF04358 DsrC like protein 3 96 3.1E-19 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0881 5adab9ed8a83592caca3fb0464f29490 96 PIRSF PIRSF006223 1 96 5.8E-15 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0228 59fe9ffcd59ce3f4ed5d4b3663fe4910 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.0E-56 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Rmag_0228 59fe9ffcd59ce3f4ed5d4b3663fe4910 201 SUPERFAMILY SSF52972 1 194 8.37E-66 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Rmag_0228 59fe9ffcd59ce3f4ed5d4b3663fe4910 201 Pfam PF01725 Ham1 family 4 191 2.3E-53 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Rmag_0228 59fe9ffcd59ce3f4ed5d4b3663fe4910 201 Gene3D G3DSA:3.90.950.10 1 197 7.4E-73 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Rmag_0228 59fe9ffcd59ce3f4ed5d4b3663fe4910 201 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 46.541 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Rmag_0411 fdbeaf98c4670602c4c5410056e25696 418 SUPERFAMILY SSF53756 56 416 7.53E-16 T 11-10-2018 Rmag_0411 fdbeaf98c4670602c4c5410056e25696 418 Gene3D G3DSA:3.40.50.11720 32 209 7.3E-46 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Rmag_0411 fdbeaf98c4670602c4c5410056e25696 418 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 2.7E-60 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Rmag_0411 fdbeaf98c4670602c4c5410056e25696 418 Pfam PF00534 Glycosyl transferases group 1 290 396 2.0E-6 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Rmag_0411 fdbeaf98c4670602c4c5410056e25696 418 Gene3D G3DSA:3.40.50.2000 218 399 2.5E-58 T 11-10-2018 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 14.053 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 SUPERFAMILY SSF116842 3 64 2.75E-18 T 11-10-2018 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 Pfam PF02609 Exonuclease VII small subunit 7 56 1.9E-17 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 PIRSF PIRSF006488 1 73 7.5E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 46 3.0E-7 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 61 1.7E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Rmag_0481 348eb23a7319e3cc0f23c16877e9e5a7 74 Gene3D G3DSA:1.10.287.1040 2 73 7.9E-21 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 4.4E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 4.4E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 4.4E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 SMART SM00411 3 92 9.8E-27 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 Gene3D G3DSA:4.10.520.10 1 95 4.3E-28 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 Pfam PF00216 Bacterial DNA-binding protein 4 90 5.4E-26 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Rmag_0641 626fdf7a0d7c83e0c26a9ee09216877e 95 SUPERFAMILY SSF47729 3 92 4.12E-24 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 411 22.185 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 Gene3D G3DSA:3.40.50.10490 33 191 1.3E-99 T 11-10-2018 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 384 401 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 SUPERFAMILY SSF53697 28 410 1.67E-94 T 11-10-2018 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 Gene3D G3DSA:3.40.50.10490 28 408 1.3E-99 T 11-10-2018 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 PRINTS PR00662 Glucose-6-phosphate isomerase signature 58 77 7.0E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 PRINTS PR00662 Glucose-6-phosphate isomerase signature 167 185 7.0E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 PRINTS PR00662 Glucose-6-phosphate isomerase signature 241 262 7.0E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 PRINTS PR00662 Glucose-6-phosphate isomerase signature 384 397 7.0E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 PRINTS PR00662 Glucose-6-phosphate isomerase signature 352 370 7.0E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 PRINTS PR00662 Glucose-6-phosphate isomerase signature 370 384 7.0E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0884 7fd624f7fabc756cbc0aa69c35293f50 411 Pfam PF00342 Phosphoglucose isomerase 52 404 4.8E-36 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0808 4d4b8d287aeee4ab038d4cdc273ba965 115 SUPERFAMILY SSF46626 3 114 5.44E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0808 4d4b8d287aeee4ab038d4cdc273ba965 115 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 40 114 1.1E-26 T 11-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX Rmag_0808 4d4b8d287aeee4ab038d4cdc273ba965 115 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 42 112 3.5E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0808 4d4b8d287aeee4ab038d4cdc273ba965 115 Gene3D G3DSA:1.10.760.10 22 115 5.7E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0908 0a3104c72db85a24e1fea9fbe383e1eb 411 Pfam PF04932 O-Antigen ligase 185 341 3.3E-18 T 11-10-2018 IPR007016 O-antigen ligase-related Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 PIRSF PIRSF000450 271 338 0.0042 T 11-10-2018 IPR033752 MetA family Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 PIRSF PIRSF000450 1 288 4.6E-61 T 11-10-2018 IPR033752 MetA family Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 Gene3D G3DSA:3.40.50.880 1 334 1.0E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 35 254 8.0E-83 T 11-10-2018 Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 333 34.203 T 11-10-2018 IPR033752 MetA family Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 Pfam PF04204 Homoserine O-succinyltransferase 2 331 2.4E-90 T 11-10-2018 IPR033752 MetA family Rmag_0018 01bc56443a4abdae3831d984b92d946c 351 SUPERFAMILY SSF52317 18 329 1.05E-68 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 SUPERFAMILY SSF75217 1 223 2.03E-89 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 Gene3D G3DSA:3.40.1280.10 1 170 5.2E-69 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 219 2.1E-60 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 223 6.7E-91 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 Gene3D G3DSA:1.10.1270.20 171 224 4.9E-24 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 224 94.432 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Rmag_0275 5c721d1a85f47f973d9ff36c1768b2ad 224 PIRSF PIRSF000386 1 224 3.0E-95 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 Pfam PF00231 ATP synthase 5 286 3.3E-91 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 Gene3D G3DSA:3.40.1380.10 61 206 2.3E-101 T 11-10-2018 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 Gene3D G3DSA:1.10.287.80 6 283 2.3E-101 T 11-10-2018 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 34.744 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 SUPERFAMILY SSF52943 4 287 6.54E-92 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 1.0E-33 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.0E-33 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 1.0E-33 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.0E-33 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1046 d86c4e99fed2407561ad43f83eff1c8b 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.7E-100 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_0262 4ba5188667fadda4b3a0ce18235c3d4a 239 SUPERFAMILY SSF53633 3 238 1.96E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0262 4ba5188667fadda4b3a0ce18235c3d4a 239 PIRSF PIRSF005650 1 239 3.2E-80 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Rmag_0262 4ba5188667fadda4b3a0ce18235c3d4a 239 Gene3D G3DSA:3.40.1160.10 2 239 4.4E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Rmag_0262 4ba5188667fadda4b3a0ce18235c3d4a 239 Pfam PF00696 Amino acid kinase family 7 216 1.9E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Rmag_0262 4ba5188667fadda4b3a0ce18235c3d4a 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 4.2E-87 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Rmag_0262 4ba5188667fadda4b3a0ce18235c3d4a 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 38.424 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Rmag_0851 a2b132fb113287e75787cecafda32abd 273 SUPERFAMILY SSF51730 3 270 9.81E-84 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like Rmag_0851 a2b132fb113287e75787cecafda32abd 273 Pfam PF02219 Methylenetetrahydrofolate reductase 2 269 2.7E-81 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Rmag_0851 a2b132fb113287e75787cecafda32abd 273 Gene3D G3DSA:3.20.20.220 1 273 3.0E-87 T 11-10-2018 Rmag_0851 a2b132fb113287e75787cecafda32abd 273 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 3 271 1.5E-96 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Rmag_0564 63af63ff2909383b32c0cc5b8b55398e 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 213 3.8E-58 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Rmag_0564 63af63ff2909383b32c0cc5b8b55398e 230 PIRSF PIRSF006293 6 230 2.0E-74 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Rmag_0564 63af63ff2909383b32c0cc5b8b55398e 230 Gene3D G3DSA:3.40.50.620 7 228 8.2E-70 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0564 63af63ff2909383b32c0cc5b8b55398e 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 226 49.917 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Rmag_0564 63af63ff2909383b32c0cc5b8b55398e 230 Pfam PF06508 Queuosine biosynthesis protein QueC 9 220 7.0E-74 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Rmag_0564 63af63ff2909383b32c0cc5b8b55398e 230 SUPERFAMILY SSF52402 9 228 1.68E-56 T 11-10-2018 Rmag_0009 d6ba3374a9ba9c415db7c5cd7f61efb9 287 Pfam PF02167 Cytochrome C1 family 36 277 1.8E-18 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Rmag_0009 d6ba3374a9ba9c415db7c5cd7f61efb9 287 SUPERFAMILY SSF46626 19 243 7.34E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0009 d6ba3374a9ba9c415db7c5cd7f61efb9 287 Gene3D G3DSA:1.10.760.10 94 244 6.3E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0009 d6ba3374a9ba9c415db7c5cd7f61efb9 287 Gene3D G3DSA:1.10.760.10 32 93 7.1E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0837 44dc1c2a798311357735755dc07518d4 163 Pfam PF00731 AIR carboxylase 5 152 1.1E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Rmag_0837 44dc1c2a798311357735755dc07518d4 163 Gene3D G3DSA:3.40.50.7700 1 162 3.4E-70 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Rmag_0837 44dc1c2a798311357735755dc07518d4 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 158 5.6E-64 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Rmag_0837 44dc1c2a798311357735755dc07518d4 163 SUPERFAMILY SSF52255 4 159 1.19E-64 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Rmag_0837 44dc1c2a798311357735755dc07518d4 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.771 T 11-10-2018 IPR033747 Class I PurE Rmag_0837 44dc1c2a798311357735755dc07518d4 163 SMART SM01001 3 154 2.1E-99 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Rmag_0837 44dc1c2a798311357735755dc07518d4 163 PIRSF PIRSF001338 1 162 1.4E-66 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Rmag_0356 557e85502c9f263998edae61e19dcf38 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 15 175 35.322 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Rmag_0356 557e85502c9f263998edae61e19dcf38 176 SUPERFAMILY SSF50324 12 175 6.8E-63 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Rmag_0356 557e85502c9f263998edae61e19dcf38 176 Pfam PF00719 Inorganic pyrophosphatase 19 174 6.4E-52 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Rmag_0356 557e85502c9f263998edae61e19dcf38 176 Gene3D G3DSA:3.90.80.10 2 176 4.5E-66 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 SUPERFAMILY SSF52540 22 231 1.98E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 TIGRFAM TIGR00436 era: GTP-binding protein Era 20 290 1.3E-88 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 Gene3D G3DSA:3.30.300.20 197 308 2.0E-40 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 SUPERFAMILY SSF54814 194 308 7.85E-39 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 Hamap MF_00367 GTPase Era [era]. 17 307 34.006 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 Pfam PF07650 KH domain 220 295 2.5E-16 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 Gene3D G3DSA:3.40.50.300 16 195 2.2E-45 T 11-10-2018 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 180 2.0E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 Pfam PF01926 50S ribosome-binding GTPase 22 136 9.7E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 22 42 5.1E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0613 a93cab6b8c389ec5a4e847ae17b9f069 308 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 5.1E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Rmag_0953 11260a214c6885a275fe732bbd934928 353 Gene3D G3DSA:3.40.640.10 47 256 6.6E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0953 11260a214c6885a275fe732bbd934928 353 Pfam PF00155 Aminotransferase class I and II 51 342 8.9E-46 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Rmag_0953 11260a214c6885a275fe732bbd934928 353 Gene3D G3DSA:3.90.1150.10 18 343 6.6E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0953 11260a214c6885a275fe732bbd934928 353 SUPERFAMILY SSF53383 24 349 3.72E-61 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0953 11260a214c6885a275fe732bbd934928 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 347 5.7E-92 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Rmag_0953 11260a214c6885a275fe732bbd934928 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 350 50.362 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Rmag_0267 43038dfbde5c77b92a66323226a643a4 188 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 69 1.4E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Rmag_0267 43038dfbde5c77b92a66323226a643a4 188 Gene3D G3DSA:1.20.120.1760 4 173 3.6E-11 T 11-10-2018 Rmag_0267 43038dfbde5c77b92a66323226a643a4 188 PIRSF PIRSF000847 1 187 3.5E-44 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Rmag_0575 e55a2d307200a65894d01aafa1c6d237 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.9E-36 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Rmag_0575 e55a2d307200a65894d01aafa1c6d237 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.4E-22 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Rmag_0575 e55a2d307200a65894d01aafa1c6d237 107 Gene3D G3DSA:2.60.300.12 2 107 3.9E-36 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_0575 e55a2d307200a65894d01aafa1c6d237 107 SUPERFAMILY SSF89360 1 96 7.59E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_0575 e55a2d307200a65894d01aafa1c6d237 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Rmag_0575 e55a2d307200a65894d01aafa1c6d237 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.1E-51 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Rmag_0423 a09a873e6c20bd6c1946f0ddd8fc43e6 426 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 13 424 5.6E-211 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Rmag_0423 a09a873e6c20bd6c1946f0ddd8fc43e6 426 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 40 421 5.9E-114 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Rmag_0423 a09a873e6c20bd6c1946f0ddd8fc43e6 426 Gene3D G3DSA:3.40.718.10 5 425 3.2E-170 T 11-10-2018 Rmag_0423 a09a873e6c20bd6c1946f0ddd8fc43e6 426 SMART SM01329 39 421 1.3E-174 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Rmag_0423 a09a873e6c20bd6c1946f0ddd8fc43e6 426 SUPERFAMILY SSF53659 13 424 2.3E-140 T 11-10-2018 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 1.6E-113 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 SUPERFAMILY SSF52935 327 476 6.28E-35 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 Gene3D G3DSA:3.20.20.60 3 338 3.2E-152 T 11-10-2018 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 475 1.4E-148 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 Gene3D G3DSA:3.40.1380.20 339 471 3.2E-152 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.3E-42 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 PRINTS PR01050 Pyruvate kinase family signature 272 296 1.3E-42 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.3E-42 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 PRINTS PR01050 Pyruvate kinase family signature 247 271 1.3E-42 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 PRINTS PR01050 Pyruvate kinase family signature 316 332 1.3E-42 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 PRINTS PR01050 Pyruvate kinase family signature 297 315 1.3E-42 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 Gene3D G3DSA:2.40.33.10 71 170 3.2E-152 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 SUPERFAMILY SSF51621 2 341 5.1E-83 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 1.3E-26 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Rmag_0066 cbb000e64c665a28204d9a58ce8941b7 480 SUPERFAMILY SSF50800 71 167 1.36E-22 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 449 38.838 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Pfam PF12804 MobA-like NTP transferase domain 6 123 1.1E-20 T 11-10-2018 IPR025877 MobA-like NTP transferase Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 SUPERFAMILY SSF53448 3 248 4.83E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 3.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 2.4E-7 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 297 7.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 452 1.5E-175 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 SUPERFAMILY SSF51161 254 433 4.54E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Gene3D G3DSA:2.160.10.10 225 452 2.1E-66 T 11-10-2018 Rmag_1030 a9bd270c8d0923ac08a46e2ea0c8df60 452 Gene3D G3DSA:3.90.550.10 1 224 1.4E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 SUPERFAMILY SSF54826 3 134 2.55E-50 T 11-10-2018 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 SMART SM01192 137 423 5.3E-219 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 SMART SM01193 3 132 7.4E-80 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PRINTS PR00148 Enolase signature 309 320 1.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PRINTS PR00148 Enolase signature 105 121 1.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PRINTS PR00148 Enolase signature 332 346 1.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PRINTS PR00148 Enolase signature 361 378 1.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PRINTS PR00148 Enolase signature 36 50 1.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PRINTS PR00148 Enolase signature 159 172 1.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 PIRSF PIRSF001400 1 423 3.3E-188 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 Hamap MF_00318 Enolase [eno]. 1 409 43.203 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 Gene3D G3DSA:3.30.390.10 1 124 1.9E-50 T 11-10-2018 IPR029017 Enolase-like, N-terminal Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 3 423 2.6E-200 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 Pfam PF03952 Enolase, N-terminal domain 3 131 1.4E-53 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 SUPERFAMILY SSF51604 137 423 6.53E-129 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 138 421 1.1E-133 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 ProSitePatterns PS00164 Enolase signature. 332 345 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0351 b5b676bf47d8a6e8f0168911498e195e 425 Gene3D G3DSA:3.20.20.120 127 425 8.7E-136 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Rmag_0466 5709fb650274951d841201d0219e0817 529 Gene3D G3DSA:3.40.50.300 15 179 1.2E-98 T 11-10-2018 Rmag_0466 5709fb650274951d841201d0219e0817 529 Gene3D G3DSA:1.10.8.60 10 242 1.2E-98 T 11-10-2018 Rmag_0466 5709fb650274951d841201d0219e0817 529 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 351 8.3E-130 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Rmag_0466 5709fb650274951d841201d0219e0817 529 SUPERFAMILY SSF48019 245 360 8.67E-23 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Rmag_0466 5709fb650274951d841201d0219e0817 529 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 388 523 8.5E-12 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0466 5709fb650274951d841201d0219e0817 529 SMART SM00382 39 180 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0466 5709fb650274951d841201d0219e0817 529 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 43 61 1.7E-6 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0466 5709fb650274951d841201d0219e0817 529 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 126 144 1.7E-6 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0466 5709fb650274951d841201d0219e0817 529 Gene3D G3DSA:1.20.272.10 244 357 6.7E-32 T 11-10-2018 Rmag_0466 5709fb650274951d841201d0219e0817 529 SUPERFAMILY SSF52540 30 224 4.97E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0466 5709fb650274951d841201d0219e0817 529 Gene3D G3DSA:3.30.300.150 385 508 2.6E-7 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0466 5709fb650274951d841201d0219e0817 529 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 362 5.4E-23 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Rmag_0466 5709fb650274951d841201d0219e0817 529 Pfam PF13177 DNA polymerase III, delta subunit 22 180 1.3E-42 T 11-10-2018 Rmag_0706 9ac61624bf3a59ce077ac83dddc3b79d 339 Gene3D G3DSA:3.40.190.10 131 334 2.7E-110 T 11-10-2018 Rmag_0706 9ac61624bf3a59ce077ac83dddc3b79d 339 Pfam PF13343 Bacterial extracellular solute-binding protein 78 306 2.5E-20 T 11-10-2018 Rmag_0706 9ac61624bf3a59ce077ac83dddc3b79d 339 PIRSF PIRSF002825 4 339 4.9E-81 T 11-10-2018 IPR026045 Ferric binding protein Rmag_0706 9ac61624bf3a59ce077ac83dddc3b79d 339 Gene3D G3DSA:3.40.190.10 33 302 2.7E-110 T 11-10-2018 Rmag_0706 9ac61624bf3a59ce077ac83dddc3b79d 339 SUPERFAMILY SSF53850 32 333 6.92E-72 T 11-10-2018 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 PIRSF PIRSF005784 5 177 2.5E-70 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 Pfam PF04060 Putative Fe-S cluster 46 78 5.6E-15 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 7 169 3.3E-69 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 SUPERFAMILY SSF54862 39 169 3.98E-27 T 11-10-2018 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 Pfam PF14697 4Fe-4S dicluster domain 112 164 3.7E-13 T 11-10-2018 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 Gene3D G3DSA:3.30.70.20 90 177 5.3E-17 T 11-10-2018 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 6 170 23.058 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Rmag_0140 35485dca65f46200362a9b9e3da970c5 179 Gene3D G3DSA:1.10.15.40 40 89 5.8E-9 T 11-10-2018 Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 4.6E-141 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 Pfam PF00575 S1 RNA binding domain 36 118 3.4E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 Gene3D G3DSA:3.40.1260.20 401 509 7.9E-24 T 11-10-2018 Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 SUPERFAMILY SSF50249 39 123 1.03E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 Pfam PF10150 Ribonuclease E/G family 122 391 2.1E-84 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 SMART SM00316 37 119 4.4E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0436 c09b8e7b74556107c2f295a1ed768aec 584 Gene3D G3DSA:2.40.50.140 31 125 3.1E-31 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 9.2E-83 T 11-10-2018 IPR020823 Cell division protein FtsA Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Gene3D G3DSA:3.30.420.40 11 372 1.1E-83 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Pfam PF14450 Cell division protein FtsA 205 374 3.9E-18 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Gene3D G3DSA:3.30.420.40 195 350 1.1E-83 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 SUPERFAMILY SSF53067 7 194 3.66E-34 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 PIRSF PIRSF003101 1 404 3.0E-92 T 11-10-2018 IPR020823 Cell division protein FtsA Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 396 20.35 T 11-10-2018 IPR020823 Cell division protein FtsA Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Pfam PF02491 SHS2 domain inserted in FTSA 84 158 1.1E-12 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Gene3D G3DSA:3.30.1490.110 82 167 1.1E-83 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 SUPERFAMILY SSF53067 197 377 3.95E-31 T 11-10-2018 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 SMART SM00842 8 194 5.1E-42 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Rmag_0443 267ac55ddd8b8fb7b2b48dc87fb979b8 406 Gene3D G3DSA:3.90.640.10 233 298 1.1E-83 T 11-10-2018 Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 SUPERFAMILY SSF48013 7 138 1.83E-25 T 11-10-2018 IPR035926 NusB-like superfamily Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 Pfam PF01029 NusB family 6 121 2.2E-17 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 SUPERFAMILY SSF53335 124 419 1.99E-64 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 137 224 2.5E-6 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 Gene3D G3DSA:3.40.50.150 133 419 1.4E-74 T 11-10-2018 Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 304 315 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 249 5.4E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 210 224 5.4E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 305 317 5.4E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 355 371 5.4E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 402 419 5.4E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 9 419 3.7E-111 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 Gene3D G3DSA:1.10.940.10 2 132 2.2E-29 T 11-10-2018 IPR035926 NusB-like superfamily Rmag_0209 afe5ac520b72c7cf3911d74586f245d1 421 Pfam PF01189 16S rRNA methyltransferase RsmB/F 229 417 3.8E-62 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Rmag_0606 611665b6534bc9155577953292f9d635 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 3.8E-16 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 290.012 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 SUPERFAMILY SSF52540 2 225 3.55E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0606 611665b6534bc9155577953292f9d635 595 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Rmag_0606 611665b6534bc9155577953292f9d635 595 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.0E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 Gene3D G3DSA:3.30.70.3380 368 478 3.8E-36 T 11-10-2018 Rmag_0606 611665b6534bc9155577953292f9d635 595 Gene3D G3DSA:2.40.30.10 186 285 2.3E-32 T 11-10-2018 Rmag_0606 611665b6534bc9155577953292f9d635 595 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.0E-47 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Rmag_0606 611665b6534bc9155577953292f9d635 595 SUPERFAMILY SSF54980 292 370 1.12E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0606 611665b6534bc9155577953292f9d635 595 TIGRFAM TIGR01393 lepA: elongation factor 4 2 595 1.9E-290 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 Gene3D G3DSA:3.40.50.300 1 185 1.6E-71 T 11-10-2018 Rmag_0606 611665b6534bc9155577953292f9d635 595 Gene3D G3DSA:3.30.70.2570 479 553 1.5E-30 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily Rmag_0606 611665b6534bc9155577953292f9d635 595 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 SUPERFAMILY SSF54980 400 493 6.23E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0606 611665b6534bc9155577953292f9d635 595 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.4E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0606 611665b6534bc9155577953292f9d635 595 Pfam PF00679 Elongation factor G C-terminus 400 480 1.1E-18 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Rmag_0606 611665b6534bc9155577953292f9d635 595 Gene3D G3DSA:3.30.70.870 286 367 1.6E-33 T 11-10-2018 Rmag_0469 abdda175be5105bfb16482f4317a42f9 277 Gene3D G3DSA:3.30.470.10 1 115 2.3E-29 T 11-10-2018 Rmag_0469 abdda175be5105bfb16482f4317a42f9 277 Pfam PF01063 Amino-transferase class IV 28 250 5.1E-50 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Rmag_0469 abdda175be5105bfb16482f4317a42f9 277 Gene3D G3DSA:3.20.10.10 118 276 3.7E-52 T 11-10-2018 Rmag_0469 abdda175be5105bfb16482f4317a42f9 277 SUPERFAMILY SSF56752 2 273 5.23E-74 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Rmag_0469 abdda175be5105bfb16482f4317a42f9 277 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 205 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 Gene3D G3DSA:1.10.150.380 296 414 5.4E-35 T 11-10-2018 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 475 2.6E-177 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 SMART SM00845 327 475 1.1E-72 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 SUPERFAMILY SSF89095 296 402 2.22E-33 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 37.08 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 SUPERFAMILY SSF55931 4 295 2.09E-119 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 Pfam PF02934 GatB/GatE catalytic domain 5 288 6.6E-111 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 Gene3D G3DSA:1.10.10.410 417 476 8.2E-22 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Rmag_0345 81eab575a1e4e7fe9490351fba17ba9b 476 Pfam PF02637 GatB domain 327 475 3.4E-48 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 Pfam PF00005 ABC transporter 352 502 1.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 Pfam PF00664 ABC transporter transmembrane region 27 288 8.4E-42 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 SUPERFAMILY SSF52540 328 573 4.08E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 Gene3D G3DSA:1.20.1560.10 3 322 4.5E-70 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 574 5.5E-183 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 SUPERFAMILY SSF90123 12 321 3.14E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 SMART SM00382 361 548 1.5E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0676 df0450ad7d7265f803421affa2ceed98 575 Gene3D G3DSA:3.40.50.300 323 574 7.2E-91 T 11-10-2018 Rmag_1054 68abf978c84f8d43cef7ce45b306c36b 272 Hamap MF_00361 NAD kinase [nadK]. 3 268 32.904 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Rmag_1054 68abf978c84f8d43cef7ce45b306c36b 272 Pfam PF01513 ATP-NAD kinase 39 246 2.9E-60 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Rmag_1054 68abf978c84f8d43cef7ce45b306c36b 272 Gene3D G3DSA:2.60.200.30 109 245 1.6E-88 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Rmag_1054 68abf978c84f8d43cef7ce45b306c36b 272 Gene3D G3DSA:3.40.50.10330 37 268 1.6E-88 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Rmag_1054 68abf978c84f8d43cef7ce45b306c36b 272 SUPERFAMILY SSF111331 5 270 2.75E-87 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Rmag_0126 018229f4b04dfa24af841e9371f1d1cc 76 Pfam PF01722 BolA-like protein 28 74 2.6E-13 T 11-10-2018 IPR002634 BolA protein Rmag_0126 018229f4b04dfa24af841e9371f1d1cc 76 SUPERFAMILY SSF82657 1 74 1.96E-19 T 11-10-2018 IPR036065 BolA-like superfamily Rmag_0126 018229f4b04dfa24af841e9371f1d1cc 76 PIRSF PIRSF003113 1 76 1.7E-17 T 11-10-2018 IPR002634 BolA protein Rmag_0126 018229f4b04dfa24af841e9371f1d1cc 76 Gene3D G3DSA:3.30.300.90 1 76 4.9E-21 T 11-10-2018 Rmag_0318 4c241146053019697bc6f5980bc6006b 327 Gene3D G3DSA:3.20.20.300 2 325 1.8E-101 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Rmag_0318 4c241146053019697bc6f5980bc6006b 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 6 286 4.8E-71 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Rmag_0318 4c241146053019697bc6f5980bc6006b 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 325 44.42 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Rmag_0318 4c241146053019697bc6f5980bc6006b 327 SUPERFAMILY SSF51445 2 288 3.9E-77 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Rmag_0836 8c0dd318c4408485f100e350d89863af 245 SUPERFAMILY SSF53474 13 228 2.6E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Rmag_0836 8c0dd318c4408485f100e350d89863af 245 Gene3D G3DSA:3.40.50.1820 2 232 1.1E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Rmag_0836 8c0dd318c4408485f100e350d89863af 245 Pfam PF12697 Alpha/beta hydrolase family 13 230 5.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 2 348 2.5E-187 T 11-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 2.1E-97 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 Gene3D G3DSA:3.20.20.70 1 353 8.0E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 138 149 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 PIRSF PIRSF001359 1 328 9.6E-83 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 SUPERFAMILY SSF51569 1 327 1.05E-104 T 11-10-2018 Rmag_0067 26549de24fac5afabb63e8bfc2f521c3 353 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 326 1.2E-91 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 Pfam PF05191 Adenylate kinase, active site lid 123 158 7.6E-15 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 Gene3D G3DSA:3.40.50.300 1 216 2.8E-73 T 11-10-2018 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 SUPERFAMILY SSF52540 1 213 1.2E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 Pfam PF00406 Adenylate kinase 5 184 1.4E-56 T 11-10-2018 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 Hamap MF_00235 Adenylate kinase [adk]. 1 216 49.462 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 PRINTS PR00094 Adenylate kinase signature 81 97 3.8E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 PRINTS PR00094 Adenylate kinase signature 32 46 3.8E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 PRINTS PR00094 Adenylate kinase signature 156 171 3.8E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 PRINTS PR00094 Adenylate kinase signature 173 187 3.8E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 PRINTS PR00094 Adenylate kinase signature 4 17 3.8E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Rmag_0093 8890174f374617ce2f5b6b87e8a5c15f 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 190 3.1E-72 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 218 1.5E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 PRINTS PR00987 Glutamyl-tRNA synthetase signature 58 71 1.5E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 41 1.5E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 54 1.5E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Gene3D G3DSA:3.90.800.10 99 207 6.2E-100 T 11-10-2018 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 SUPERFAMILY SSF52374 10 338 3.1E-94 T 11-10-2018 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 26 337 2.7E-109 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 26 548 1.1E-237 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 341 531 2.0E-53 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Gene3D G3DSA:2.40.240.10 349 468 3.9E-65 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Gene3D G3DSA:3.40.50.620 28 245 6.2E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 32 43 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Gene3D G3DSA:2.40.240.10 341 546 3.9E-65 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 Gene3D G3DSA:1.10.1160.10 262 340 4.9E-32 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Rmag_0909 575413eb2d41101047c61a2c35e3e93c 549 SUPERFAMILY SSF50715 341 547 1.1E-63 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 9 409 1.3E-167 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 Pfam PF00202 Aminotransferase class-III 22 408 5.1E-123 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 Gene3D G3DSA:3.40.640.10 57 318 4.0E-152 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 PIRSF PIRSF000521 19 152 8.8E-12 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 PIRSF PIRSF000521 178 412 9.1E-23 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 Gene3D G3DSA:3.90.1150.10 5 398 4.0E-152 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0118 6b824e35a36c5f3cdb2c1a140967abf2 412 SUPERFAMILY SSF53383 4 409 1.04E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0014 a4929e80de933a29db07349f3285300c 352 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 352 36.05 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Rmag_0014 a4929e80de933a29db07349f3285300c 352 SUPERFAMILY SSF53067 4 295 3.5E-16 T 11-10-2018 Rmag_0014 a4929e80de933a29db07349f3285300c 352 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 350 2.5E-119 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Rmag_0014 a4929e80de933a29db07349f3285300c 352 Gene3D G3DSA:3.30.420.40 9 347 7.3E-106 T 11-10-2018 Rmag_0014 a4929e80de933a29db07349f3285300c 352 Gene3D G3DSA:3.30.420.40 138 312 7.3E-106 T 11-10-2018 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 3.0E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 SUPERFAMILY SSF54368 3 99 3.92E-33 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 Gene3D G3DSA:3.10.20.70 2 104 1.5E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 Gene3D G3DSA:3.30.590.10 105 459 1.2E-139 T 11-10-2018 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 SUPERFAMILY SSF55931 103 470 8.83E-128 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 470 9.6E-193 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 Pfam PF00120 Glutamine synthetase, catalytic domain 103 468 3.7E-132 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Rmag_0498 c292977e7b71210663cf09d422c56ec7 471 SMART SM01230 102 381 1.2E-137 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 Gene3D G3DSA:1.10.166.10 1 68 6.3E-25 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 173 207 8.3E-13 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 Gene3D G3DSA:2.160.10.10 85 255 3.3E-53 T 11-10-2018 Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 SUPERFAMILY SSF51161 2 254 1.18E-69 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 270 54.163 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 2 271 2.1E-142 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 1 67 2.4E-23 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Rmag_0074 e59aaf8f3de460c3a03bd5e28ca9ac90 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 164 0.001 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0314 e170eca605a7f540b2ec0f1d2176f486 177 Pfam PF01565 FAD binding domain 29 103 1.5E-7 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Rmag_0314 e170eca605a7f540b2ec0f1d2176f486 177 SUPERFAMILY SSF56176 29 140 4.11E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Rmag_0314 e170eca605a7f540b2ec0f1d2176f486 177 Gene3D G3DSA:3.30.465.10 31 139 1.8E-25 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Rmag_1051 353fc81dac856e81d323baf3f79460bb 284 SUPERFAMILY SSF81336 103 277 3.79E-39 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1051 353fc81dac856e81d323baf3f79460bb 284 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 283 14.53 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1051 353fc81dac856e81d323baf3f79460bb 284 Gene3D G3DSA:1.20.120.220 102 284 3.1E-55 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1051 353fc81dac856e81d323baf3f79460bb 284 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 277 6.9E-40 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1051 353fc81dac856e81d323baf3f79460bb 284 Pfam PF00119 ATP synthase A chain 55 276 3.4E-51 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1051 353fc81dac856e81d323baf3f79460bb 284 ProSitePatterns PS00449 ATP synthase a subunit signature. 219 228 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_0997 7ad2253c24973be9d805d17e8b5866f1 185 SUPERFAMILY SSF53335 26 182 8.4E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0997 7ad2253c24973be9d805d17e8b5866f1 185 Pfam PF02390 Putative methyltransferase 24 178 4.9E-32 T 11-10-2018 Rmag_0997 7ad2253c24973be9d805d17e8b5866f1 185 Gene3D G3DSA:3.40.50.150 1 185 8.1E-33 T 11-10-2018 Rmag_0042 3d9e9d1d779c21cd4c232f45b01795d0 193 SUPERFAMILY SSF89392 25 189 1.92E-22 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Rmag_0042 3d9e9d1d779c21cd4c232f45b01795d0 193 Gene3D G3DSA:2.50.20.10 22 193 5.2E-23 T 11-10-2018 Rmag_0042 3d9e9d1d779c21cd4c232f45b01795d0 193 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 30 182 7.0E-21 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Rmag_0143 7cc8e1733621797321924eb23990ce14 202 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 191 3.9E-51 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Rmag_0143 7cc8e1733621797321924eb23990ce14 202 PIRSF PIRSF006091 1 195 2.6E-59 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Rmag_0143 7cc8e1733621797321924eb23990ce14 202 SMART SM00900 98 190 2.3E-30 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Rmag_0143 7cc8e1733621797321924eb23990ce14 202 Pfam PF04205 FMN-binding domain 98 187 1.4E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Rmag_0143 7cc8e1733621797321924eb23990ce14 202 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 192 22.696 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Rmag_0994 1569ae3bf3e35dc0255d876aca0cdfa8 78 SUPERFAMILY SSF143800 2 77 1.71E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0994 1569ae3bf3e35dc0255d876aca0cdfa8 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.252 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0994 1569ae3bf3e35dc0255d876aca0cdfa8 78 Gene3D G3DSA:2.30.170.40 2 78 1.8E-32 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0994 1569ae3bf3e35dc0255d876aca0cdfa8 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 5.3E-28 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0994 1569ae3bf3e35dc0255d876aca0cdfa8 78 Pfam PF00830 Ribosomal L28 family 3 62 2.7E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 322 6.7E-62 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.8E-72 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 324 43.948 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 Gene3D G3DSA:3.40.50.720 1 181 1.2E-73 T 11-10-2018 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 322 9.9E-128 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 PIRSF PIRSF000116 201 329 1.8E-14 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 PIRSF PIRSF000116 2 208 4.2E-47 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 SUPERFAMILY SSF48179 183 328 1.05E-67 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 SUPERFAMILY SSF51735 1 182 4.03E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0447 2cd8794d488400e31ff1074b0330aa81 334 Gene3D G3DSA:1.10.3730.40 182 334 1.8E-70 T 11-10-2018 Rmag_0178 8f2f53c8b0309e2f68cc606401de49b2 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.9E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0178 8f2f53c8b0309e2f68cc606401de49b2 101 Gene3D G3DSA:4.10.830.10 41 101 1.0E-20 T 11-10-2018 Rmag_0178 8f2f53c8b0309e2f68cc606401de49b2 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.77 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Rmag_0178 8f2f53c8b0309e2f68cc606401de49b2 101 SUPERFAMILY SSF57716 2 101 1.09E-37 T 11-10-2018 Rmag_0184 bb881b7700602214cc7d9cd7b4312e3c 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 31 145 1.5E-24 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P Rmag_0184 bb881b7700602214cc7d9cd7b4312e3c 147 Gene3D G3DSA:3.100.10.10 74 147 9.0E-10 T 11-10-2018 Rmag_0184 bb881b7700602214cc7d9cd7b4312e3c 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 5 144 2.7E-46 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0184 bb881b7700602214cc7d9cd7b4312e3c 147 SUPERFAMILY SSF52080 7 145 8.24E-42 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Rmag_0184 bb881b7700602214cc7d9cd7b4312e3c 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 6 145 17.225 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 9.8E-34 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 SUPERFAMILY SSF54999 6 102 1.31E-35 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 SMART SM01403 7 101 2.6E-53 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 25.849 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.8E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.8E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.8E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-43 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0164 eb6dddc81b70c576f963a406c03d6424 103 Gene3D G3DSA:3.30.70.600 1 103 7.3E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Rmag_0549 30170cdb206caf216e22d6ad2b4504a7 265 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 263 4.1E-79 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Rmag_0549 30170cdb206caf216e22d6ad2b4504a7 265 Gene3D G3DSA:3.60.21.10 1 265 6.6E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Rmag_0549 30170cdb206caf216e22d6ad2b4504a7 265 Pfam PF00149 Calcineurin-like phosphoesterase 5 225 2.3E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Rmag_0549 30170cdb206caf216e22d6ad2b4504a7 265 PIRSF PIRSF000903 1 265 1.2E-97 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Rmag_0549 30170cdb206caf216e22d6ad2b4504a7 265 SUPERFAMILY SSF56300 1 255 1.02E-50 T 11-10-2018 Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 83 180 4.2E-34 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 SUPERFAMILY SSF56420 1 183 5.5E-58 T 11-10-2018 IPR036821 Peptide deformylase superfamily Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 PRINTS PR01576 Peptide deformylase signature 32 61 2.2E-36 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 PRINTS PR01576 Peptide deformylase signature 109 120 2.2E-36 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 PRINTS PR01576 Peptide deformylase signature 140 169 2.2E-36 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 PRINTS PR01576 Peptide deformylase signature 121 139 2.2E-36 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 Hamap MF_00163 Peptide deformylase [def]. 1 182 29.207 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 Gene3D G3DSA:3.90.45.10 1 185 8.0E-61 T 11-10-2018 IPR036821 Peptide deformylase superfamily Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 Pfam PF01327 Polypeptide deformylase 3 172 5.5E-49 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0967 8a3f39214cb775df7b17123ad78e71de 185 PIRSF PIRSF004749 1 185 1.4E-52 T 11-10-2018 IPR023635 Peptide deformylase Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 109 22.025 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 96 5.0E-13 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 112 3.0E-22 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 SUPERFAMILY SSF89919 4 111 4.45E-27 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 Pfam PF02033 Ribosome-binding factor A 8 109 1.1E-25 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Rmag_0055 3af3da3ac3fa07839fc506f8f15f7503 112 Gene3D G3DSA:3.30.300.20 4 112 1.6E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 PIRSF PIRSF001563 2 401 8.8E-98 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 SUPERFAMILY SSF53244 269 397 3.11E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 394 5.6E-85 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 Gene3D G3DSA:3.40.1190.10 2 266 1.9E-80 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 SUPERFAMILY SSF53623 6 262 2.29E-78 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 Pfam PF08245 Mur ligase middle domain 48 187 5.8E-10 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Rmag_0999 f0a43392bd0bc0e25edaf552a26dafad 404 Gene3D G3DSA:3.90.190.20 269 403 1.5E-21 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0098 ea41fad99ba7e96309c40da55eb78463 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 194 3.8E-10 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0098 ea41fad99ba7e96309c40da55eb78463 199 Gene3D G3DSA:3.40.30.10 1 196 7.6E-70 T 11-10-2018 Rmag_0098 ea41fad99ba7e96309c40da55eb78463 199 SUPERFAMILY SSF52833 4 196 4.73E-61 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0098 ea41fad99ba7e96309c40da55eb78463 199 PIRSF PIRSF000239 1 198 8.4E-54 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0098 ea41fad99ba7e96309c40da55eb78463 199 Pfam PF00578 AhpC/TSA family 5 138 8.5E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 816 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 SUPERFAMILY SSF50677 226 410 1.99E-50 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 482 500 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 9.0E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 2.2E-26 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 614 1.0E-28 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Gene3D G3DSA:2.30.210.10 571 583 2.4E-245 T 11-10-2018 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Pfam PF08264 Anticodon-binding domain of tRNA 655 775 8.1E-18 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 SUPERFAMILY SSF52374 4 622 9.97E-143 T 11-10-2018 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 SUPERFAMILY SSF47323 617 816 8.04E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Gene3D G3DSA:3.10.20.590 754 816 1.6E-18 T 11-10-2018 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Gene3D G3DSA:3.40.50.620 34 570 2.4E-245 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Gene3D G3DSA:3.90.740.10 228 410 2.4E-245 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 398 2.7E-71 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Gene3D G3DSA:1.10.730.10 595 752 3.0E-45 T 11-10-2018 Rmag_0005 cb94e6e94d80cb40f0a6755e819346ea 816 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 815 22.673 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 Gene3D G3DSA:3.40.50.2020 151 293 4.4E-122 T 11-10-2018 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 Gene3D G3DSA:3.40.50.2020 9 305 4.4E-122 T 11-10-2018 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 317 45.792 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 SMART SM01400 6 124 1.3E-64 T 11-10-2018 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 124 2.7E-43 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 207 316 2.3E-29 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 317 4.5E-115 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Rmag_0109 7a07eebe8650a0091a24f8ab1c45c793 317 SUPERFAMILY SSF53271 72 307 4.76E-61 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 Gene3D G3DSA:3.20.20.70 3 245 1.4E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 Pfam PF01207 Dihydrouridine synthase (Dus) 9 300 2.5E-81 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 PIRSF PIRSF006621 1 315 8.5E-75 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 Gene3D G3DSA:1.20.120.1460 249 317 5.3E-10 T 11-10-2018 Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 318 46.483 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 SUPERFAMILY SSF51395 6 300 6.6E-66 T 11-10-2018 Rmag_0442 4ba65e66928c91252ff6f874345bc7ff 322 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 308 8.3E-132 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 152 468 1.4E-28 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Gene3D G3DSA:3.30.70.20 587 651 1.5E-10 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Gene3D G3DSA:3.50.50.60 320 416 6.3E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Pfam PF12838 4Fe-4S dicluster domain 597 646 4.8E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 SUPERFAMILY SSF46548 52 160 5.75E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 SUPERFAMILY SSF51971 150 417 4.12E-56 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 PRINTS PR00419 Adrenodoxin reductase family signature 348 361 5.0E-19 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 PRINTS PR00419 Adrenodoxin reductase family signature 284 298 5.0E-19 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 PRINTS PR00419 Adrenodoxin reductase family signature 153 175 5.0E-19 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 PRINTS PR00419 Adrenodoxin reductase family signature 176 189 5.0E-19 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 PRINTS PR00419 Adrenodoxin reductase family signature 218 228 5.0E-19 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Gene3D G3DSA:1.10.1060.10 23 149 8.3E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 633 644 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 SUPERFAMILY SSF54862 46 650 2.97E-17 T 11-10-2018 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 51 139 1.5E-12 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Rmag_0862 eba989bebceb29ebadd2fccb65041182 654 Gene3D G3DSA:3.50.50.60 150 271 2.0E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0021 84b68329ce4b6bffc7d35868117e1b54 101 Gene3D G3DSA:3.10.50.40 2 91 2.2E-30 T 11-10-2018 Rmag_0021 84b68329ce4b6bffc7d35868117e1b54 101 SUPERFAMILY SSF54534 4 85 2.95E-27 T 11-10-2018 Rmag_0021 84b68329ce4b6bffc7d35868117e1b54 101 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 18 85 1.0E-23 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 SUPERFAMILY SSF55681 1 198 1.66E-63 T 11-10-2018 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 Hamap MF_00013 Octanoyltransferase [lipB]. 1 202 34.429 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 70 123 3.0E-13 T 11-10-2018 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 Pfam PF03099 Biotin/lipoate A/B protein ligase family 53 154 2.9E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 PIRSF PIRSF016262 1 204 2.0E-62 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 66 81 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 22 194 2.7E-60 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Rmag_0542 6f0b0f93ef17fc593b904a6f53350354 204 Gene3D G3DSA:3.30.930.10 1 200 1.6E-60 T 11-10-2018 Rmag_0487 c2968e451c62a9fbd24b304b622d8acf 233 SMART SM00563 71 185 1.7E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Rmag_0487 c2968e451c62a9fbd24b304b622d8acf 233 Pfam PF01553 Acyltransferase 58 182 7.5E-21 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Rmag_0487 c2968e451c62a9fbd24b304b622d8acf 233 SUPERFAMILY SSF69593 15 231 2.22E-41 T 11-10-2018 Rmag_0578 33504684fd55309698c919d038dc02d5 139 SUPERFAMILY SSF46785 2 133 2.72E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Rmag_0578 33504684fd55309698c919d038dc02d5 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 7.4E-41 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Rmag_0578 33504684fd55309698c919d038dc02d5 139 Pfam PF02082 Transcriptional regulator 1 83 5.8E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Rmag_0578 33504684fd55309698c919d038dc02d5 139 Gene3D G3DSA:1.10.10.10 1 138 8.1E-48 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0124 aef434484ba701d92733ed458ce1722b 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 5.4E-47 T 11-10-2018 IPR002727 Protein of unknown function DUF47 Rmag_0124 aef434484ba701d92733ed458ce1722b 225 Gene3D G3DSA:1.20.58.220 1 225 6.8E-55 T 11-10-2018 IPR038078 PhoU-like domain superfamily Rmag_0124 aef434484ba701d92733ed458ce1722b 225 Pfam PF01865 Protein of unknown function DUF47 8 224 2.8E-50 T 11-10-2018 IPR018445 Putative phosphate transport regulator Rmag_0124 aef434484ba701d92733ed458ce1722b 225 SUPERFAMILY SSF109755 48 216 6.28E-7 T 11-10-2018 Rmag_0725 e48df3d160b801922ac59c1e144f3ea7 223 Pfam PF01618 MotA/TolQ/ExbB proton channel family 76 206 1.1E-38 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Rmag_0725 e48df3d160b801922ac59c1e144f3ea7 223 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 5.9E-73 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 Pfam PF00814 Glycoprotease family 45 323 8.7E-97 T 11-10-2018 IPR000905 Gcp-like domain Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 ProSitePatterns PS01016 Glycoprotease family signature. 116 136 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 Gene3D G3DSA:3.30.420.40 149 310 3.4E-119 T 11-10-2018 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 SUPERFAMILY SSF53067 121 325 4.37E-40 T 11-10-2018 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 SUPERFAMILY SSF53067 23 142 1.78E-28 T 11-10-2018 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 21 349 59.547 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 24 323 4.8E-113 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 24 330 2.2E-125 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 Gene3D G3DSA:3.30.420.40 24 332 3.4E-119 T 11-10-2018 Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 117 136 2.4E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 151 163 2.4E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 24 37 2.4E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 280 289 2.4E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 116 2.4E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_0980 8313fd6b8ca12b6c533e3ef97833b8e0 356 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 174 195 2.4E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 Hamap MF_00050 Elongation factor Ts [tsf]. 1 290 71.286 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 Gene3D G3DSA:1.10.286.20 192 238 5.3E-40 T 11-10-2018 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 SUPERFAMILY SSF54713 151 291 1.31E-51 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 SUPERFAMILY SSF54713 55 146 2.62E-14 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 Gene3D G3DSA:3.30.479.20 156 272 5.3E-40 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 Gene3D G3DSA:1.10.8.10 1 55 2.0E-24 T 11-10-2018 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 Gene3D G3DSA:3.30.479.20 56 149 5.7E-19 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 291 1.9E-96 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 SUPERFAMILY SSF46934 1 55 8.35E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 Rmag_1073 21e0c011d3fb64e944345a662d50d270 296 Pfam PF00889 Elongation factor TS 73 273 9.2E-65 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Rmag_0449 be9ccdf66958654687904622d75f5530 511 Pfam PF00682 HMGL-like 5 273 9.5E-95 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Rmag_0449 be9ccdf66958654687904622d75f5530 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0449 be9ccdf66958654687904622d75f5530 511 Gene3D G3DSA:3.20.20.70 1 322 2.9E-130 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0449 be9ccdf66958654687904622d75f5530 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 3.0E-217 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0449 be9ccdf66958654687904622d75f5530 511 SMART SM00917 370 500 5.0E-42 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0449 be9ccdf66958654687904622d75f5530 511 SUPERFAMILY SSF51569 1 291 5.86E-97 T 11-10-2018 Rmag_0449 be9ccdf66958654687904622d75f5530 511 Gene3D G3DSA:3.30.160.270 353 499 1.7E-9 T 11-10-2018 Rmag_0449 be9ccdf66958654687904622d75f5530 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 1.1E-33 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0449 be9ccdf66958654687904622d75f5530 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0449 be9ccdf66958654687904622d75f5530 511 SUPERFAMILY SSF110921 392 499 1.44E-22 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0449 be9ccdf66958654687904622d75f5530 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.84 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Rmag_0303 888a46532d57f3879473dbc008328376 125 Gene3D G3DSA:3.30.479.10 1 123 1.0E-33 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Rmag_0303 888a46532d57f3879473dbc008328376 125 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 94 1.8E-28 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Rmag_0303 888a46532d57f3879473dbc008328376 125 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 8 121 2.7E-36 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Rmag_0303 888a46532d57f3879473dbc008328376 125 PIRSF PIRSF006113 1 123 3.8E-26 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Rmag_0303 888a46532d57f3879473dbc008328376 125 SUPERFAMILY SSF55620 1 121 2.0E-35 T 11-10-2018 Rmag_0856 f5ebc2fd72277d2f6339a11fb2d472ca 156 Gene3D G3DSA:3.40.50.300 3 156 1.2E-38 T 11-10-2018 Rmag_0856 f5ebc2fd72277d2f6339a11fb2d472ca 156 SUPERFAMILY SSF52540 30 115 2.31E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0856 f5ebc2fd72277d2f6339a11fb2d472ca 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 137 2.2E-34 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Rmag_0856 f5ebc2fd72277d2f6339a11fb2d472ca 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 142 1.1E-35 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 355 48.973 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 SUPERFAMILY SSF53659 3 355 1.57E-115 T 11-10-2018 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 SMART SM01329 3 351 6.2E-186 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 Gene3D G3DSA:3.40.718.10 1 355 4.5E-139 T 11-10-2018 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 351 4.1E-129 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Rmag_0099 d98d6633af3cfa64952c81cdbeb36583 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 349 1.7E-150 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 1.3E-85 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 115 1.5E-16 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 Gene3D G3DSA:2.30.110.10 15 212 1.8E-75 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 PIRSF PIRSF000190 1 212 2.3E-77 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 SUPERFAMILY SSF50475 17 212 2.75E-59 T 11-10-2018 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 1.7E-20 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Rmag_0434 b87545d99420676fb9c1a8e3f029aac8 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 212 38.536 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.8E-40 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 Gene3D G3DSA:3.30.70.120 1 112 5.7E-44 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 SUPERFAMILY SSF54913 1 112 3.05E-42 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 SMART SM00938 4 105 2.5E-61 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 PIRSF PIRSF039144 1 112 7.6E-53 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0276 aff449761e86ea1bd455578459bd2a14 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0841 49fd59f183bddcb3e5bac90080e0e746 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 237 2.5E-81 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Rmag_0841 49fd59f183bddcb3e5bac90080e0e746 244 SUPERFAMILY SSF53448 1 242 7.21E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0841 49fd59f183bddcb3e5bac90080e0e746 244 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 244 38.705 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Rmag_0841 49fd59f183bddcb3e5bac90080e0e746 244 Gene3D G3DSA:3.90.550.10 1 243 3.9E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0841 49fd59f183bddcb3e5bac90080e0e746 244 Pfam PF02348 Cytidylyltransferase 5 217 2.9E-55 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 SUPERFAMILY SSF52317 9 205 2.2E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Pfam PF02540 NAD synthase 213 286 1.8E-6 T 11-10-2018 IPR022310 NAD/GMP synthase Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 6.8E-6 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 6.8E-6 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 6.8E-6 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Pfam PF00958 GMP synthase C terminal domain 429 520 2.7E-41 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Gene3D G3DSA:3.40.50.880 7 205 8.8E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 201 3.6E-75 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 521 53.167 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.5E-7 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.5E-7 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.5E-7 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Pfam PF00117 Glutamine amidotransferase class-I 12 193 8.3E-41 T 11-10-2018 IPR017926 Glutamine amidotransferase Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 SUPERFAMILY SSF54810 401 521 3.53E-48 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 521 4.8E-138 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Gene3D G3DSA:3.30.300.10 402 521 3.1E-49 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 Gene3D G3DSA:3.40.50.620 206 401 6.4E-70 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.4E-6 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 1.4E-6 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.4E-6 T 11-10-2018 Rmag_0914 2f2fe72635fac6cf849cb9f925e546d9 521 SUPERFAMILY SSF52402 193 416 1.12E-47 T 11-10-2018 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 27 173 8.3E-45 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 241 327 1.9E-10 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 SUPERFAMILY SSF50891 28 178 3.21E-54 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 Gene3D G3DSA:3.10.50.40 179 333 3.8E-16 T 11-10-2018 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 SUPERFAMILY SSF54534 173 329 6.87E-14 T 11-10-2018 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 Gene3D G3DSA:2.40.100.10 24 178 3.2E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 4.5E-30 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 131 4.5E-30 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 4.5E-30 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 40 55 4.5E-30 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0310 d9a625ae843385d4c3e6054f16836948 333 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 143 4.5E-30 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Rmag_0637 2ac5a3ae187389f47021d1bc0c9ba482 234 Gene3D G3DSA:1.25.10.90 4 229 1.5E-47 T 11-10-2018 Rmag_0637 2ac5a3ae187389f47021d1bc0c9ba482 234 SUPERFAMILY SSF48371 10 222 1.17E-45 T 11-10-2018 IPR016024 Armadillo-type fold Rmag_0637 2ac5a3ae187389f47021d1bc0c9ba482 234 Pfam PF08713 DNA alkylation repair enzyme 8 221 3.4E-63 T 11-10-2018 IPR014825 DNA alkylation repair enzyme Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 SUPERFAMILY SSF55920 3 254 2.88E-82 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 253 40.46 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 252 8.2E-94 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 5.8E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 5.8E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 5.8E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 5.8E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 Pfam PF00557 Metallopeptidase family M24 12 243 1.9E-48 T 11-10-2018 IPR000994 Peptidase M24 Rmag_0398 6b0bacce0bce4c4d67d83a96459e1de8 258 Gene3D G3DSA:3.90.230.10 1 258 2.0E-103 T 11-10-2018 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 Gene3D G3DSA:3.40.640.10 1 252 2.0E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 SUPERFAMILY SSF53383 26 384 6.12E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 PIRSF PIRSF001434 1 386 4.6E-128 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 Gene3D G3DSA:3.90.1150.10 256 387 4.0E-48 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 6 385 1.6E-168 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 7 387 51.728 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 197 211 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Rmag_1002 4d20c946fd81e3ce8a7a955e8d4130a3 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 385 9.9E-139 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Gene3D G3DSA:3.30.70.1450 140 232 1.3E-22 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Pfam PF02080 TrkA-C domain 156 225 4.1E-14 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Pfam PF02080 TrkA-C domain 392 452 6.3E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 SUPERFAMILY SSF116726 368 450 2.49E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 SUPERFAMILY SSF51735 232 377 3.77E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Gene3D G3DSA:3.30.70.1450 368 456 2.9E-24 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 SUPERFAMILY SSF51735 1 152 7.6E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Gene3D G3DSA:3.40.50.720 233 367 4.4E-35 T 11-10-2018 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Gene3D G3DSA:3.40.50.720 2 139 4.3E-44 T 11-10-2018 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.8E-17 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 PRINTS PR00335 TrkA potassium uptake protein signature 74 88 9.8E-17 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 PRINTS PR00335 TrkA potassium uptake protein signature 61 71 9.8E-17 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 PRINTS PR00335 TrkA potassium uptake protein signature 50 60 9.8E-17 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 SUPERFAMILY SSF116726 139 224 1.31E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Pfam PF02254 TrkA-N domain 235 351 7.8E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Rmag_0363 40479e4c4c3470ae198a68348fb9da50 457 Pfam PF02254 TrkA-N domain 3 109 2.2E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 Pfam PF01084 Ribosomal protein S18 27 76 3.9E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 TIGRFAM TIGR00165 S18: ribosomal protein bS18 17 81 1.8E-30 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 Gene3D G3DSA:4.10.640.10 28 83 2.5E-25 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 81 19.896 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 PRINTS PR00974 Ribosomal protein S18 family signature 46 53 3.8E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 PRINTS PR00974 Ribosomal protein S18 family signature 54 68 3.8E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 PRINTS PR00974 Ribosomal protein S18 family signature 68 78 3.8E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 PRINTS PR00974 Ribosomal protein S18 family signature 36 46 3.8E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 29 78 2.0E-20 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0665 1bfcad09a75189b98a20232550fb427a 84 SUPERFAMILY SSF46911 6 82 1.96E-26 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 Gene3D G3DSA:3.90.1260.10 181 403 3.2E-102 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 SUPERFAMILY SSF69864 178 401 7.19E-95 T 11-10-2018 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 Gene3D G3DSA:3.40.50.620 7 176 3.6E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 403 51.447 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 399 3.2E-144 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 SUPERFAMILY SSF52402 7 212 2.43E-48 T 11-10-2018 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0151 57c36b8a2fe57c702ed7a3f3c1057955 403 Pfam PF00764 Arginosuccinate synthase 10 399 6.1E-156 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0822 08c7327aa714feaf39a8d29a3cdc0a15 112 Gene3D G3DSA:3.30.428.10 1 112 9.9E-37 T 11-10-2018 IPR036265 HIT-like superfamily Rmag_0822 08c7327aa714feaf39a8d29a3cdc0a15 112 SUPERFAMILY SSF54197 1 111 1.21E-33 T 11-10-2018 IPR036265 HIT-like superfamily Rmag_0822 08c7327aa714feaf39a8d29a3cdc0a15 112 Pfam PF01230 HIT domain 13 105 3.1E-24 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0822 08c7327aa714feaf39a8d29a3cdc0a15 112 PRINTS PR00332 Histidine triad family signature 5 21 4.2E-17 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0822 08c7327aa714feaf39a8d29a3cdc0a15 112 PRINTS PR00332 Histidine triad family signature 26 44 4.2E-17 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0822 08c7327aa714feaf39a8d29a3cdc0a15 112 PRINTS PR00332 Histidine triad family signature 92 102 4.2E-17 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 Gene3D G3DSA:2.40.30.170 39 342 3.7E-24 T 11-10-2018 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 Gene3D G3DSA:2.40.50.100 50 271 3.7E-24 T 11-10-2018 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 280 304 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 304 327 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 388 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 368 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 247 268 1.0E-38 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 Gene3D G3DSA:1.10.287.470 85 234 3.7E-24 T 11-10-2018 Rmag_0256 c51c68f6ac93adb7d5df1a4eeb9cbe76 389 Pfam PF13437 HlyD family secretion protein 235 343 1.2E-16 T 11-10-2018 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 PRINTS PR00481 Cytosol aminopeptidase signature 263 284 3.5E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 PRINTS PR00481 Cytosol aminopeptidase signature 322 342 3.5E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 PRINTS PR00481 Cytosol aminopeptidase signature 241 258 3.5E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 PRINTS PR00481 Cytosol aminopeptidase signature 300 321 3.5E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 PRINTS PR00481 Cytosol aminopeptidase signature 350 365 3.5E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 31 130 7.9E-9 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 473 33.796 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 Gene3D G3DSA:3.40.220.10 1 162 6.0E-11 T 11-10-2018 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 166 465 2.2E-122 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 Gene3D G3DSA:3.40.630.10 163 473 6.1E-133 T 11-10-2018 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 SUPERFAMILY SSF53187 159 471 6.59E-122 T 11-10-2018 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 326 333 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Rmag_0211 63232bd1cd8305abb8c68546c22c36be 473 SUPERFAMILY SSF52949 1 164 4.36E-12 T 11-10-2018 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 2.5E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 2.5E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 2.5E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 2.5E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 2.5E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 Pfam PF01467 Cytidylyltransferase-like 7 135 1.0E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 57 5.5E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 Gene3D G3DSA:3.40.50.620 1 159 1.2E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 SUPERFAMILY SSF52374 4 158 2.2E-44 T 11-10-2018 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 159 32.693 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0354 d07d1f7a11f096014e9ba73b31791e51 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 158 3.7E-59 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 Gene3D G3DSA:3.30.420.80 1 127 1.0E-52 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 Pfam PF00411 Ribosomal protein S11 17 126 4.4E-48 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 PIRSF PIRSF002131 1 127 1.3E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 1.2E-53 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 30.952 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Rmag_0188 6c7d5b4043082606ce0a33c78fc5a5d4 127 SUPERFAMILY SSF53137 13 127 2.92E-45 T 11-10-2018 Rmag_0744 fe756e745cc5d9a5e1ff7bc500742fbb 224 SUPERFAMILY SSF52833 42 223 5.82E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0744 fe756e745cc5d9a5e1ff7bc500742fbb 224 Pfam PF02630 SCO1/SenC 29 163 3.6E-28 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0744 fe756e745cc5d9a5e1ff7bc500742fbb 224 Gene3D G3DSA:3.40.30.10 39 224 4.5E-47 T 11-10-2018 Rmag_0939 9b1d97cdf350a530f764cd61e3d09b13 187 SUPERFAMILY SSF52833 6 183 2.35E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0939 9b1d97cdf350a530f764cd61e3d09b13 187 Pfam PF00578 AhpC/TSA family 13 135 1.1E-15 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0939 9b1d97cdf350a530f764cd61e3d09b13 187 Gene3D G3DSA:3.40.30.10 9 186 9.4E-39 T 11-10-2018 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 Pfam PF00925 GTP cyclohydrolase II 207 353 2.1E-26 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 36.499 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 Gene3D G3DSA:3.40.50.10990 206 356 3.4E-20 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 Gene3D G3DSA:3.90.870.10 1 205 2.3E-84 T 11-10-2018 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 197 2.0E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 PIRSF PIRSF001259 1 357 6.6E-114 T 11-10-2018 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 SUPERFAMILY SSF55821 3 202 1.26E-83 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 1.2E-71 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0505 3115772372ec3db36f92edc577a0bae1 357 SUPERFAMILY SSF142695 203 354 5.49E-37 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Rmag_0968 fd8d59c05119a19ec3434765d9b6d2bd 76 Gene3D G3DSA:1.10.10.60 1 76 9.1E-21 T 11-10-2018 Rmag_0968 fd8d59c05119a19ec3434765d9b6d2bd 76 SUPERFAMILY SSF46689 9 76 2.54E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Rmag_0968 fd8d59c05119a19ec3434765d9b6d2bd 76 PIRSF PIRSF002097 1 76 9.6E-24 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Rmag_0968 fd8d59c05119a19ec3434765d9b6d2bd 76 Pfam PF02954 Bacterial regulatory protein, Fis family 36 74 5.9E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 SUPERFAMILY SSF46565 3 75 9.03E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 Gene3D G3DSA:1.10.287.110 2 80 1.5E-19 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 Gene3D G3DSA:1.20.1280.20 82 171 1.3E-17 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 14 168 2.8E-33 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 2 171 19.706 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 SUPERFAMILY SSF47144 79 169 1.11E-14 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Rmag_0574 9f5cf9af3e8d674e3fe7a2eb6c16dad0 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 160 8.8E-14 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 SMART SM00382 121 254 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Pfam PF00308 Bacterial dnaA protein 90 308 1.1E-75 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 154 168 3.9E-40 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 122 142 3.9E-40 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 387 406 3.9E-40 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 220 247 3.9E-40 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 186 200 3.9E-40 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Gene3D G3DSA:1.10.1750.10 330 429 5.7E-30 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Gene3D G3DSA:3.30.300.180 2 90 1.6E-16 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 338 406 1.7E-27 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 SUPERFAMILY SSF52540 87 299 8.57E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 426 2.0E-130 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Pfam PF11638 DnaA N-terminal domain 3 63 6.2E-13 T 11-10-2018 IPR024633 DnaA N-terminal domain Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Gene3D G3DSA:1.10.8.60 255 329 2.1E-15 T 11-10-2018 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 SUPERFAMILY SSF48295 325 428 6.28E-32 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Gene3D G3DSA:3.40.50.300 91 254 6.0E-44 T 11-10-2018 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 ProSitePatterns PS01008 DnaA protein signature. 387 406 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 428 28.492 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Rmag_0001 603e6733ea32dbe80697094ac40b79eb 430 SMART SM00760 337 406 4.8E-33 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Rmag_0528 b2da2370baa99ce16a8baf451e93538f 140 SUPERFAMILY SSF55729 21 117 3.23E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Rmag_0528 b2da2370baa99ce16a8baf451e93538f 140 Pfam PF00583 Acetyltransferase (GNAT) family 30 96 1.8E-6 T 11-10-2018 IPR000182 GNAT domain Rmag_0528 b2da2370baa99ce16a8baf451e93538f 140 Gene3D G3DSA:3.40.630.30 3 139 1.1E-25 T 11-10-2018 Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 586 2.0E-257 T 11-10-2018 IPR017535 Asparagine synthase family amidotransferase Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 PIRSF PIRSF001589 1 591 1.2E-180 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 Pfam PF00733 Asparagine synthase 243 586 7.2E-77 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 Gene3D G3DSA:3.60.20.10 4 185 3.3E-62 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 SUPERFAMILY SSF52402 219 584 1.28E-65 T 11-10-2018 Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 Pfam PF13522 Glutamine amidotransferase domain 32 161 1.3E-45 T 11-10-2018 Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 519 1.7E-139 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Rmag_0373 88af4c544faf441ca061263a4ce374b4 591 SUPERFAMILY SSF56235 1 224 3.43E-60 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Rmag_0833 1126cf9d0c5c351fbe6ca6471b801f4c 136 Gene3D G3DSA:2.20.25.10 1 31 5.2E-12 T 11-10-2018 Rmag_0833 1126cf9d0c5c351fbe6ca6471b801f4c 136 SUPERFAMILY SSF82784 1 134 2.49E-37 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Rmag_0833 1126cf9d0c5c351fbe6ca6471b801f4c 136 Pfam PF02566 OsmC-like protein 33 127 3.1E-15 T 11-10-2018 IPR003718 OsmC/Ohr family Rmag_0833 1126cf9d0c5c351fbe6ca6471b801f4c 136 Gene3D G3DSA:3.30.300.20 39 136 1.6E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0561 41999ce125e39d2f255f44a78209a916 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.5E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.666 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 SUPERFAMILY SSF50129 1 95 1.53E-33 T 11-10-2018 IPR011032 GroES-like superfamily Rmag_0561 41999ce125e39d2f255f44a78209a916 95 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 PRINTS PR00297 10kDa chaperonin signature 81 94 1.3E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 Gene3D G3DSA:2.30.33.40 1 95 1.4E-35 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Rmag_0561 41999ce125e39d2f255f44a78209a916 95 SMART SM00883 2 94 6.1E-54 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Rmag_0196 cf7702e9ffeb6f01afe330fd697f152e 122 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 121 1.1E-50 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Rmag_0196 cf7702e9ffeb6f01afe330fd697f152e 122 Gene3D G3DSA:2.170.150.20 1 122 1.3E-55 T 11-10-2018 Rmag_0196 cf7702e9ffeb6f01afe330fd697f152e 122 SUPERFAMILY SSF51316 4 121 2.35E-52 T 11-10-2018 IPR011057 Mss4-like superfamily Rmag_0196 cf7702e9ffeb6f01afe330fd697f152e 122 Pfam PF01641 SelR domain 4 121 2.8E-51 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 847 3.6E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 3.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 3.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 3.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 3.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Gene3D G3DSA:1.10.1780.10 8 155 1.4E-21 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Gene3D G3DSA:1.10.8.60 769 859 8.0E-23 T 11-10-2018 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 SUPERFAMILY SSF52540 166 552 3.18E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 323 6.6E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 13 858 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Gene3D G3DSA:3.40.50.300 156 349 4.6E-71 T 11-10-2018 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 101 151 3.9E-5 T 11-10-2018 IPR004176 Clp, N-terminal Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 75 1.5E-8 T 11-10-2018 IPR004176 Clp, N-terminal Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 SUPERFAMILY SSF81923 11 163 2.35E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Gene3D G3DSA:3.40.50.300 351 551 7.3E-68 T 11-10-2018 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 SMART SM01086 769 858 3.8E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 SMART SM00382 604 762 5.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 SMART SM00382 205 350 1.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 763 9.9E-54 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 SUPERFAMILY SSF52540 553 855 9.96E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Rmag_0787 908ea05ca9d20a5ff74fa55c712f9b3f 859 Gene3D G3DSA:3.40.50.300 557 767 1.3E-84 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SUPERFAMILY SSF50249 1 113 2.16E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Gene3D G3DSA:2.40.50.140 187 268 1.7E-24 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SUPERFAMILY SSF50249 255 365 3.93E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SUPERFAMILY SSF50249 430 539 1.12E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SUPERFAMILY SSF50249 189 276 1.34E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Gene3D G3DSA:2.40.50.140 445 529 6.6E-18 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SUPERFAMILY SSF50249 346 440 3.43E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SMART SM00316 19 87 1.9E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SMART SM00316 362 435 1.8E-17 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SMART SM00316 450 521 1.3E-16 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SMART SM00316 275 347 1.9E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SMART SM00316 190 260 3.2E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SMART SM00316 103 171 8.1E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Gene3D G3DSA:2.40.50.140 100 184 3.7E-9 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Gene3D G3DSA:2.40.50.140 6 99 9.1E-17 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.2E-71 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 5.2E-184 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Gene3D G3DSA:2.40.50.140 358 444 2.3E-19 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Gene3D G3DSA:2.40.50.140 269 357 2.0E-30 T 11-10-2018 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Pfam PF00575 S1 RNA binding domain 450 521 9.1E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Pfam PF00575 S1 RNA binding domain 190 259 2.6E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Pfam PF00575 S1 RNA binding domain 275 347 4.3E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Pfam PF00575 S1 RNA binding domain 19 81 3.5E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Pfam PF00575 S1 RNA binding domain 104 171 2.9E-12 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 Pfam PF00575 S1 RNA binding domain 361 435 1.6E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PIRSF PIRSF002111 1 386 7.3E-159 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 PIRSF PIRSF002111 384 544 2.4E-35 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Rmag_0592 45ce7d391b5838236283003427c33cf2 558 SUPERFAMILY SSF50249 105 180 8.58E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_1065 274ac4708a18d8c964595e36098d3674 106 Pfam PF02036 SCP-2 sterol transfer family 2 73 2.8E-7 T 11-10-2018 IPR003033 SCP2 sterol-binding domain Rmag_1065 274ac4708a18d8c964595e36098d3674 106 SUPERFAMILY SSF55718 8 73 4.12E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Rmag_0460 97130fc54c9c3269e5f9e8ee3a48077d 107 Pfam PF04102 SlyX 33 83 8.0E-8 T 11-10-2018 IPR007236 SlyX Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 Hamap MF_01201 Alanine racemase. 1 349 29.366 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 SMART SM01005 225 349 9.6E-57 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 25 41 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 187 214 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 331 344 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 241 256 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 279 296 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 150 161 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 116 128 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 PRINTS PR00992 Alanine racemase signature 258 273 1.4E-54 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 SUPERFAMILY SSF51419 7 226 1.57E-53 T 11-10-2018 IPR029066 PLP-binding barrel Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 Gene3D G3DSA:3.20.20.10 9 212 1.0E-109 T 11-10-2018 IPR029066 PLP-binding barrel Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 Gene3D G3DSA:2.40.37.10 7 344 1.0E-109 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 SUPERFAMILY SSF50621 219 345 8.02E-45 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 Pfam PF00842 Alanine racemase, C-terminal domain 225 345 4.9E-39 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 Pfam PF01168 Alanine racemase, N-terminal domain 7 214 1.2E-55 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0668 78016a0e3c536eb2e3a9c158c9693a27 350 TIGRFAM TIGR00492 alr: alanine racemase 3 345 2.6E-102 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 Pfam PF08238 Sel1 repeat 117 144 9.9E-4 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 Pfam PF08238 Sel1 repeat 43 77 1.4E-5 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 Pfam PF08238 Sel1 repeat 79 110 1.7E-7 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 SUPERFAMILY SSF81901 16 144 3.66E-29 T 11-10-2018 Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 Gene3D G3DSA:1.25.40.10 11 146 2.1E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 SMART SM00671 42 77 9.4E-4 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 SMART SM00671 78 113 4.2E-6 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0473 4b8354656fc7099bda4df04854ddf17f 149 SMART SM00671 114 149 13.0 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0532 49c855f8e116bb60c601cb20726c5ab2 318 Gene3D G3DSA:3.30.930.10 2 316 1.0E-51 T 11-10-2018 Rmag_0532 49c855f8e116bb60c601cb20726c5ab2 318 SUPERFAMILY SSF55681 4 314 1.11E-40 T 11-10-2018 Rmag_0532 49c855f8e116bb60c601cb20726c5ab2 318 Pfam PF13393 Histidyl-tRNA synthetase 9 312 3.2E-80 T 11-10-2018 Rmag_0532 49c855f8e116bb60c601cb20726c5ab2 318 PIRSF PIRSF001549 1 316 7.5E-33 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Rmag_0532 49c855f8e116bb60c601cb20726c5ab2 318 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 318 21.544 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 676 3.9E-213 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 543 2.3E-191 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 SUPERFAMILY SSF109604 333 530 4.4E-16 T 11-10-2018 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 239 254 1.3E-32 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 387 406 1.3E-32 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.3E-32 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 311 327 1.3E-32 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.3E-32 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0721 34cdefe052755cabf6373557e8cfb51d 678 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 676 23.855 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0770 57130adf9258629be15812443c1fe24f 354 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 319 1.7E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Rmag_0770 57130adf9258629be15812443c1fe24f 354 PIRSF PIRSF038945 1 351 1.3E-161 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Rmag_0770 57130adf9258629be15812443c1fe24f 354 SUPERFAMILY SSF53686 5 341 6.81E-104 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Rmag_0770 57130adf9258629be15812443c1fe24f 354 TIGRFAM TIGR00260 thrC: threonine synthase 7 326 1.0E-95 T 11-10-2018 IPR004450 Threonine synthase-like Rmag_0770 57130adf9258629be15812443c1fe24f 354 Gene3D G3DSA:3.40.50.1100 13 326 3.8E-123 T 11-10-2018 Rmag_0770 57130adf9258629be15812443c1fe24f 354 Gene3D G3DSA:3.40.50.1100 61 157 3.8E-123 T 11-10-2018 Rmag_0770 57130adf9258629be15812443c1fe24f 354 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Rmag_0988 df0d2cdfb007201cb66b607912fa480b 201 SUPERFAMILY SSF53056 3 200 3.92E-49 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Rmag_0988 df0d2cdfb007201cb66b607912fa480b 201 Pfam PF00484 Carbonic anhydrase 46 197 2.5E-35 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Rmag_0988 df0d2cdfb007201cb66b607912fa480b 201 Gene3D G3DSA:3.40.1050.10 1 201 7.8E-56 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Rmag_0988 df0d2cdfb007201cb66b607912fa480b 201 SMART SM00947 39 201 4.3E-44 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Rmag_0847 3c58cf98b869c74d0b2722c935550e67 376 PIRSF PIRSF015658 1 376 1.2E-177 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Rmag_0847 3c58cf98b869c74d0b2722c935550e67 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.5E-178 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Rmag_0847 3c58cf98b869c74d0b2722c935550e67 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 374 2.9E-160 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Rmag_0849 2309672f9fd902bcb67f746d4a580343 84 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 78 5.4E-16 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Rmag_0849 2309672f9fd902bcb67f746d4a580343 84 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 80 1.1E-13 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SUPERFAMILY SSF53098 315 497 8.07E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Gene3D G3DSA:1.10.150.20 171 243 3.0E-82 T 11-10-2018 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Pfam PF00476 DNA polymerase family A 532 906 8.8E-144 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 TIGRFAM TIGR00593 pola: DNA polymerase I 5 906 5.0E-257 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Gene3D G3DSA:3.30.70.370 645 905 2.7E-105 T 11-10-2018 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SMART SM00475 3 258 1.9E-93 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SUPERFAMILY SSF47807 168 281 2.24E-27 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 254 9.3E-24 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Gene3D G3DSA:1.10.150.20 690 833 2.7E-105 T 11-10-2018 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 167 1.2E-47 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SUPERFAMILY SSF88723 4 153 1.35E-48 T 11-10-2018 IPR029060 PIN-like domain superfamily Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SUPERFAMILY SSF56672 503 905 1.89E-143 T 11-10-2018 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SMART SM00482 667 873 5.8E-103 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SMART SM00279 170 205 8.4E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Gene3D G3DSA:1.20.1060.10 524 639 8.9E-33 T 11-10-2018 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 SMART SM00474 312 498 3.9E-20 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Pfam PF01612 3'-5' exonuclease 315 497 2.9E-23 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Gene3D G3DSA:3.40.50.1010 5 273 3.0E-82 T 11-10-2018 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 ProSitePatterns PS00447 DNA polymerase family A signature. 735 754 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 Gene3D G3DSA:3.30.420.10 310 523 4.1E-58 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 760 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 856 869 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 711 724 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 674 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 772 783 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 636 658 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 704 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 842 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0078 5cb239f5476e5a505479849051ea66ac 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.1E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0111 32b29e24fb1dbf07dc6b967851c40737 180 Gene3D G3DSA:3.30.420.10 1 180 7.9E-68 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Rmag_0111 32b29e24fb1dbf07dc6b967851c40737 180 SUPERFAMILY SSF53098 3 178 2.28E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0111 32b29e24fb1dbf07dc6b967851c40737 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 39.864 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 Rmag_0111 32b29e24fb1dbf07dc6b967851c40737 180 SMART SM00479 6 179 3.3E-8 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0111 32b29e24fb1dbf07dc6b967851c40737 180 Pfam PF00929 Exonuclease 8 169 4.5E-27 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0654 b56458584a60adedaf772800a8445ca2 260 Gene3D G3DSA:3.40.50.720 7 202 1.4E-34 T 11-10-2018 Rmag_0654 b56458584a60adedaf772800a8445ca2 260 SUPERFAMILY SSF51735 6 254 2.12E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0654 b56458584a60adedaf772800a8445ca2 260 PIRSF PIRSF000094 1 257 3.5E-112 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_0654 b56458584a60adedaf772800a8445ca2 260 Gene3D G3DSA:1.10.8.400 204 257 3.6E-19 T 11-10-2018 Rmag_0654 b56458584a60adedaf772800a8445ca2 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 2.3E-82 T 11-10-2018 Rmag_0654 b56458584a60adedaf772800a8445ca2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 6 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0654 b56458584a60adedaf772800a8445ca2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0654 b56458584a60adedaf772800a8445ca2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0654 b56458584a60adedaf772800a8445ca2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0654 b56458584a60adedaf772800a8445ca2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0307 270dd7f628666498e728348b6a836f14 522 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Rmag_0307 270dd7f628666498e728348b6a836f14 522 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 520 49.78 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Rmag_0307 270dd7f628666498e728348b6a836f14 522 Pfam PF03144 Elongation factor Tu domain 2 308 374 1.4E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 Pfam PF00009 Elongation factor Tu GTP binding domain 7 271 2.3E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 Gene3D G3DSA:3.30.70.3280 384 522 3.8E-47 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Rmag_0307 270dd7f628666498e728348b6a836f14 522 PRINTS PR00315 GTP-binding elongation factor signature 79 89 7.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 PRINTS PR00315 GTP-binding elongation factor signature 95 106 7.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 PRINTS PR00315 GTP-binding elongation factor signature 59 67 7.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 PRINTS PR00315 GTP-binding elongation factor signature 9 22 7.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 SUPERFAMILY SSF52540 3 271 1.32E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0307 270dd7f628666498e728348b6a836f14 522 Pfam PF16658 Class II release factor RF3, C-terminal domain 381 506 4.2E-44 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Rmag_0307 270dd7f628666498e728348b6a836f14 522 Gene3D G3DSA:3.40.50.300 15 269 3.1E-114 T 11-10-2018 Rmag_0307 270dd7f628666498e728348b6a836f14 522 SUPERFAMILY SSF54980 387 462 4.32E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like Rmag_0307 270dd7f628666498e728348b6a836f14 522 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 150 1.1E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Rmag_0307 270dd7f628666498e728348b6a836f14 522 SUPERFAMILY SSF50447 256 387 2.59E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Rmag_0307 270dd7f628666498e728348b6a836f14 522 Gene3D G3DSA:3.40.50.300 8 372 3.1E-114 T 11-10-2018 Rmag_0307 270dd7f628666498e728348b6a836f14 522 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 2 522 2.7E-241 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 5.8E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 5.8E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 5.8E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.288 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 SUPERFAMILY SSF50249 8 83 8.14E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0174 457e187fcef7919c770c2c796787aacf 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 78 8.0E-22 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 77 1.1E-32 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 Pfam PF00366 Ribosomal protein S17 12 79 4.5E-28 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0174 457e187fcef7919c770c2c796787aacf 88 Gene3D G3DSA:2.40.50.140 3 86 1.9E-31 T 11-10-2018 Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 Pfam PF02954 Bacterial regulatory protein, Fis family 155 185 2.0E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 SUPERFAMILY SSF46689 121 189 2.44E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 Gene3D G3DSA:3.40.50.2300 9 128 5.4E-30 T 11-10-2018 Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 SMART SM00448 8 120 4.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 Gene3D G3DSA:1.10.10.60 137 191 7.3E-15 T 11-10-2018 Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 SUPERFAMILY SSF52172 9 132 1.42E-33 T 11-10-2018 IPR011006 CheY-like superfamily Rmag_0362 b06b8aa9258ded852c2c84cd170e60fe 191 Pfam PF00072 Response regulator receiver domain 10 111 1.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 576 1.9E-241 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 578 32.651 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 1.4E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Pfam PF02938 GAD domain 308 402 6.7E-27 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 SUPERFAMILY SSF55681 109 577 2.19E-101 T 11-10-2018 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 SUPERFAMILY SSF55261 291 415 1.11E-40 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Gene3D G3DSA:2.40.50.140 1 104 7.0E-34 T 11-10-2018 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 552 3.1E-108 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 SUPERFAMILY SSF50249 1 104 4.19E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Gene3D G3DSA:3.30.930.10 116 575 7.2E-192 T 11-10-2018 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.5E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.5E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 512 526 1.5E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 468 484 1.5E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0396 7bac2f11fd7071b1ea1c02d86406e77b 583 Gene3D G3DSA:3.30.1360.30 272 416 7.2E-192 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Pfam PF13184 NusA-like KH domain 235 302 1.9E-25 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SUPERFAMILY SSF54814 284 346 1.57E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Pfam PF08529 NusA N-terminal domain 5 129 1.1E-29 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 347 3.3E-115 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SUPERFAMILY SSF47794 428 486 1.88E-12 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Gene3D G3DSA:3.30.1480.10 3 134 2.8E-32 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SUPERFAMILY SSF50249 137 204 3.51E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Gene3D G3DSA:1.10.150.20 430 487 8.1E-16 T 11-10-2018 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Gene3D G3DSA:1.10.150.20 359 426 6.9E-16 T 11-10-2018 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Gene3D G3DSA:3.30.300.20 283 351 5.1E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SUPERFAMILY SSF47794 359 420 1.88E-10 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Gene3D G3DSA:2.40.50.140 140 203 7.0E-19 T 11-10-2018 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SUPERFAMILY SSF54814 206 283 2.22E-27 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 415 28.071 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SUPERFAMILY SSF69705 4 131 5.36E-29 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Pfam PF14520 Helix-hairpin-helix domain 431 486 1.1E-9 T 11-10-2018 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Pfam PF00575 S1 RNA binding domain 138 199 6.9E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 Gene3D G3DSA:3.30.300.20 204 282 2.4E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SMART SM00316 138 205 2.1E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SMART SM00322 235 298 34.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Rmag_0053 a5edcee04cbbd46980126e4c56e400d5 491 SMART SM00322 306 379 0.004 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Rmag_0669 51aadfc82517c4d6ef96acfc35636a81 234 Gene3D G3DSA:3.60.21.10 1 232 1.1E-46 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Rmag_0669 51aadfc82517c4d6ef96acfc35636a81 234 Pfam PF00149 Calcineurin-like phosphoesterase 5 187 9.8E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Rmag_0669 51aadfc82517c4d6ef96acfc35636a81 234 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 4 234 33.511 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 Rmag_0669 51aadfc82517c4d6ef96acfc35636a81 234 SUPERFAMILY SSF56300 4 228 1.03E-40 T 11-10-2018 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 Pfam PF01578 Cytochrome C assembly protein 23 184 4.9E-27 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 227 2.0E-75 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 5.0E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 5.0E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 5.0E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 5.0E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 5.0E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0661 14cacfb4b340f2f17415a5c3487cafdb 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 5.0E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0039 ed2dbe57e3851fad9da709d3bbea18bb 472 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 445 1.9E-109 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0039 ed2dbe57e3851fad9da709d3bbea18bb 472 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0039 ed2dbe57e3851fad9da709d3bbea18bb 472 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 6 464 2.7E-196 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Rmag_0039 ed2dbe57e3851fad9da709d3bbea18bb 472 Gene3D G3DSA:1.20.210.10 2 472 4.6E-183 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0039 ed2dbe57e3851fad9da709d3bbea18bb 472 SUPERFAMILY SSF81442 8 465 1.02E-111 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0425 7365a8502a1e57e304272b244d5d6503 392 Gene3D G3DSA:3.40.640.10 64 288 3.0E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0425 7365a8502a1e57e304272b244d5d6503 392 Pfam PF00155 Aminotransferase class I and II 33 389 1.2E-71 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Rmag_0425 7365a8502a1e57e304272b244d5d6503 392 SUPERFAMILY SSF53383 4 391 4.4E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0425 7365a8502a1e57e304272b244d5d6503 392 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Rmag_0425 7365a8502a1e57e304272b244d5d6503 392 Gene3D G3DSA:3.90.1150.10 27 389 3.0E-128 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 SUPERFAMILY SSF51726 6 346 5.41E-116 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 2 345 49.958 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 138 154 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 344 8.9E-136 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 5 343 2.0E-134 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 Gene3D G3DSA:3.20.20.210 4 347 7.3E-147 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Rmag_1026 45b4906d6510f2904808d16206a0ec4c 347 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 18 27 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 27 321 3.3E-104 T 11-10-2018 IPR011970 Lytic murein transglycosylase Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 Gene3D G3DSA:1.10.530.10 70 317 4.7E-87 T 11-10-2018 Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 SUPERFAMILY SSF47090 330 393 7.06E-16 T 11-10-2018 IPR036365 PGBD-like superfamily Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 Pfam PF01471 Putative peptidoglycan binding domain 338 393 3.2E-12 T 11-10-2018 IPR002477 Peptidoglycan binding-like Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 Gene3D G3DSA:1.10.8.350 39 202 4.7E-87 T 11-10-2018 Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 SUPERFAMILY SSF53955 24 320 7.31E-90 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 Gene3D G3DSA:1.10.101.10 328 394 3.2E-13 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Rmag_0047 97866e487ccbeaa02d3f7f319a8615c0 394 Pfam PF13406 Transglycosylase SLT domain 27 318 1.0E-103 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 Rmag_0680 a63e350f3a9f48964f5bc63101bed447 104 SUPERFAMILY SSF50249 3 66 8.81E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0680 a63e350f3a9f48964f5bc63101bed447 104 Pfam PF00313 'Cold-shock' DNA-binding domain 6 64 2.0E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Rmag_0680 a63e350f3a9f48964f5bc63101bed447 104 SMART SM00357 6 66 0.0014 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Rmag_0680 a63e350f3a9f48964f5bc63101bed447 104 PIRSF PIRSF002599 1 104 8.5E-10 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Rmag_0680 a63e350f3a9f48964f5bc63101bed447 104 Gene3D G3DSA:2.40.50.140 5 71 1.9E-13 T 11-10-2018 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 Gene3D G3DSA:3.40.309.10 228 376 8.8E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 7 418 39.639 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 408 1.7E-141 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 Pfam PF00171 Aldehyde dehydrogenase family 14 283 1.9E-12 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 Gene3D G3DSA:3.40.605.10 20 413 8.8E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 PIRSF PIRSF000151 1 419 2.0E-170 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Rmag_0133 37bd0e2c36674a3d8f824c93766f12de 419 SUPERFAMILY SSF53720 11 418 7.72E-110 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 SUPERFAMILY SSF51182 185 469 5.44E-76 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 Pfam PF01050 Mannose-6-phosphate isomerase 315 465 6.5E-60 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 Pfam PF00483 Nucleotidyl transferase 5 286 5.2E-60 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 468 1.2E-195 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 SUPERFAMILY SSF53448 1 280 4.93E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 Gene3D G3DSA:3.90.550.10 1 346 4.3E-107 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0904 77ca575d7241501984ce002fb16cc1dd 472 Gene3D G3DSA:2.60.120.10 347 457 4.4E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 3.6E-23 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 22.422 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 144 8.1E-40 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 SUPERFAMILY SSF55658 1 56 4.71E-16 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 Gene3D G3DSA:3.40.5.10 1 49 4.2E-20 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 Gene3D G3DSA:3.10.430.100 61 146 1.7E-24 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.3E-19 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0666 566c4fdfc1830d71076fb4471a713a8a 150 SUPERFAMILY SSF55653 58 145 3.92E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Rmag_0251 d781e5479bfc8e5d07032890517a8c65 2819 SUPERFAMILY SSF51120 2589 2781 2.04E-5 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Rmag_0251 d781e5479bfc8e5d07032890517a8c65 2819 Gene3D G3DSA:2.60.40.2030 2193 2312 4.5E-9 T 11-10-2018 IPR038081 CalX-like domain superfamily Rmag_0251 d781e5479bfc8e5d07032890517a8c65 2819 Pfam PF13205 Bacterial Ig-like domain 1761 1863 2.5E-8 T 11-10-2018 IPR032812 SbsA, Ig-like domain Rmag_0251 d781e5479bfc8e5d07032890517a8c65 2819 Pfam PF13205 Bacterial Ig-like domain 1080 1172 3.0E-11 T 11-10-2018 IPR032812 SbsA, Ig-like domain Rmag_0251 d781e5479bfc8e5d07032890517a8c65 2819 SUPERFAMILY SSF141072 2193 2338 2.35E-15 T 11-10-2018 IPR038081 CalX-like domain superfamily Rmag_0251 d781e5479bfc8e5d07032890517a8c65 2819 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2734 2813 5.1E-11 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 Pfam PF00202 Aminotransferase class-III 33 397 1.8E-70 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 Gene3D G3DSA:3.40.640.10 69 317 1.2E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 7.7E-186 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 427 102.154 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 SUPERFAMILY SSF53383 2 424 1.87E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0222 7b57c72bf729373f486d7cdb56a43a08 428 Gene3D G3DSA:3.90.1150.10 7 419 1.2E-168 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0519 60e8d363b446e570962568cf287eddf6 207 Pfam PF01914 MarC family integral membrane protein 6 200 8.7E-52 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Rmag_0519 60e8d363b446e570962568cf287eddf6 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 197 1.1E-45 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Rmag_0581 31e1db45c4df5c6f8605d318cbdce36c 263 Pfam PF01171 PP-loop family 45 214 3.6E-18 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Rmag_0581 31e1db45c4df5c6f8605d318cbdce36c 263 Gene3D G3DSA:3.40.50.620 11 262 2.0E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0581 31e1db45c4df5c6f8605d318cbdce36c 263 PIRSF PIRSF004976 10 260 3.3E-54 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Rmag_0581 31e1db45c4df5c6f8605d318cbdce36c 263 SUPERFAMILY SSF52402 23 238 6.75E-47 T 11-10-2018 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Gene3D G3DSA:2.40.160.50 427 762 1.3E-86 T 11-10-2018 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Pfam PF01103 Surface antigen 452 762 1.1E-63 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 5 762 21.283 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Pfam PF07244 Surface antigen variable number repeat 269 345 6.5E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Pfam PF07244 Surface antigen variable number repeat 92 173 2.0E-7 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Pfam PF07244 Surface antigen variable number repeat 351 424 2.8E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Pfam PF07244 Surface antigen variable number repeat 177 266 5.4E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Gene3D G3DSA:3.10.20.310 91 174 1.4E-14 T 11-10-2018 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Gene3D G3DSA:3.10.20.310 22 90 5.7E-14 T 11-10-2018 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Gene3D G3DSA:3.10.20.310 176 267 2.4E-15 T 11-10-2018 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 PIRSF PIRSF006076 1 762 1.1E-194 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 762 2.7E-201 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Gene3D G3DSA:3.10.20.310 351 424 3.7E-22 T 11-10-2018 Rmag_0553 b728d2a2459da31434baa599880ce41b 762 Gene3D G3DSA:3.10.20.310 270 347 2.7E-15 T 11-10-2018 Rmag_0538 7cf14ab787b976f64edbb38d93b4ecc0 434 Pfam PF00463 Isocitrate lyase family 12 259 8.4E-64 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Rmag_0538 7cf14ab787b976f64edbb38d93b4ecc0 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Rmag_0538 7cf14ab787b976f64edbb38d93b4ecc0 434 Gene3D G3DSA:3.20.20.60 1 417 1.8E-176 T 11-10-2018 Rmag_0538 7cf14ab787b976f64edbb38d93b4ecc0 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 4.1E-110 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Rmag_0538 7cf14ab787b976f64edbb38d93b4ecc0 434 PIRSF PIRSF001362 1 434 1.7E-213 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Rmag_0538 7cf14ab787b976f64edbb38d93b4ecc0 434 SUPERFAMILY SSF51621 10 417 3.5E-149 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.9E-13 T 11-10-2018 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.9E-13 T 11-10-2018 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.9E-13 T 11-10-2018 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 PRINTS PR00070 Dihydrofolate reductase signature 92 106 4.9E-13 T 11-10-2018 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 Gene3D G3DSA:3.40.430.10 1 163 3.7E-57 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 SUPERFAMILY SSF53597 1 160 1.57E-53 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 Pfam PF00186 Dihydrofolate reductase 2 160 7.1E-60 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Rmag_1019 62095bead1994fb64a757f01ec99c6ce 163 PIRSF PIRSF000194 1 163 5.6E-57 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Rmag_0848 a12316389172197e96e81f45243bf948 609 Gene3D G3DSA:3.20.20.70 5 476 2.2E-161 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0848 a12316389172197e96e81f45243bf948 609 SUPERFAMILY SSF51569 16 315 3.66E-85 T 11-10-2018 Rmag_0848 a12316389172197e96e81f45243bf948 609 Pfam PF00682 HMGL-like 19 284 1.7E-51 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Rmag_0848 a12316389172197e96e81f45243bf948 609 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 565 582 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Rmag_0848 a12316389172197e96e81f45243bf948 609 Gene3D G3DSA:2.40.50.100 537 608 2.9E-22 T 11-10-2018 Rmag_0848 a12316389172197e96e81f45243bf948 609 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 22 605 6.8E-250 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Rmag_0848 a12316389172197e96e81f45243bf948 609 Pfam PF00364 Biotin-requiring enzyme 549 608 2.5E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Rmag_0848 a12316389172197e96e81f45243bf948 609 SUPERFAMILY SSF51230 538 608 1.26E-19 T 11-10-2018 IPR011053 Single hybrid motif Rmag_0848 a12316389172197e96e81f45243bf948 609 Pfam PF02436 Conserved carboxylase domain 307 502 1.6E-54 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Rmag_0848 a12316389172197e96e81f45243bf948 609 SUPERFAMILY SSF89000 312 471 1.73E-46 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.5E-11 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.5E-11 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.5E-11 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 1.0E-83 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 Pfam PF00117 Glutamine amidotransferase class-I 4 190 6.4E-54 T 11-10-2018 IPR017926 Glutamine amidotransferase Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.5E-34 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-34 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.5E-34 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.5E-34 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.5E-34 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.5E-34 T 11-10-2018 Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 SUPERFAMILY SSF52317 2 190 2.39E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0931 d3494b70bd57c29677983c37f8388e9c 195 Gene3D G3DSA:3.40.50.880 1 192 1.3E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0167 bd69db3c9cf6a4f4924a447979f7ba28 96 Gene3D G3DSA:3.30.70.330 1 96 1.9E-29 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Rmag_0167 bd69db3c9cf6a4f4924a447979f7ba28 96 SUPERFAMILY SSF54189 6 93 1.55E-26 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0167 bd69db3c9cf6a4f4924a447979f7ba28 96 Pfam PF00276 Ribosomal protein L23 8 93 4.5E-27 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Rmag_0167 bd69db3c9cf6a4f4924a447979f7ba28 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 96 19.372 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 Gene3D G3DSA:3.50.50.60 144 276 3.7E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0871 62930374044ffc136db049e8f7cd3773 477 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 133 2.0E-22 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 465 2.2E-22 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 SUPERFAMILY SSF51971 145 410 1.08E-57 T 11-10-2018 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 Gene3D G3DSA:3.50.50.60 277 476 2.3E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0871 62930374044ffc136db049e8f7cd3773 477 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 476 3.6E-209 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 SUPERFAMILY SSF51971 357 469 6.12E-5 T 11-10-2018 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.9E-25 T 11-10-2018 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 2.9E-25 T 11-10-2018 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.9E-25 T 11-10-2018 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.9E-25 T 11-10-2018 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 Gene3D G3DSA:1.10.1060.10 7 141 1.8E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0871 62930374044ffc136db049e8f7cd3773 477 SUPERFAMILY SSF46548 2 157 1.62E-32 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 555 1.3E-219 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 SUPERFAMILY SSF55681 10 467 2.13E-103 T 11-10-2018 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Gene3D G3DSA:3.30.930.10 11 454 1.9E-224 T 11-10-2018 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Pfam PF03129 Anticodon binding domain 464 556 4.5E-16 T 11-10-2018 IPR004154 Anticodon-binding Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 559 38.62 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Gene3D G3DSA:3.40.50.800 4 542 1.9E-224 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Rmag_0348 ee3e06896682f89f5790f406267cf017 559 SUPERFAMILY SSF55826 252 388 6.67E-17 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.4E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.4E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.4E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.4E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Pfam PF04073 Aminoacyl-tRNA editing domain 258 371 1.1E-20 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 SUPERFAMILY SSF52954 452 556 5.74E-28 T 11-10-2018 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Gene3D G3DSA:3.90.960.10 240 378 1.9E-224 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Rmag_0348 ee3e06896682f89f5790f406267cf017 559 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 448 9.8E-45 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0699 c3c88ff289453696be36268abf1d055b 747 SMART SM00327 556 746 2.1E-9 T 11-10-2018 IPR002035 von Willebrand factor, type A Rmag_0699 c3c88ff289453696be36268abf1d055b 747 SUPERFAMILY SSF53300 556 741 2.43E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Rmag_0699 c3c88ff289453696be36268abf1d055b 747 Gene3D G3DSA:3.40.50.410 556 742 5.5E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Rmag_0699 c3c88ff289453696be36268abf1d055b 747 Pfam PF00092 von Willebrand factor type A domain 559 715 6.6E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 180 202 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 Pfam PF00742 Homoserine dehydrogenase 134 312 1.5E-61 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 Pfam PF01842 ACT domain 345 407 2.2E-10 T 11-10-2018 IPR002912 ACT domain Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 Gene3D G3DSA:3.30.360.10 133 338 1.5E-151 T 11-10-2018 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 PIRSF PIRSF000098 1 424 2.1E-155 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 SUPERFAMILY SSF51735 1 155 4.03E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 Gene3D G3DSA:3.30.70.260 339 412 1.5E-151 T 11-10-2018 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 126 6.9E-18 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 Gene3D G3DSA:3.40.50.720 1 330 1.5E-151 T 11-10-2018 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 SUPERFAMILY SSF55347 134 299 2.75E-52 T 11-10-2018 Rmag_0769 b89201bed84d3ab1af6b295a868fcf36 425 SUPERFAMILY SSF55021 344 413 2.06E-10 T 11-10-2018 Rmag_0607 078dd497450cd04233b0711ac44b0c32 149 Pfam PF00578 AhpC/TSA family 8 126 1.7E-27 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0607 078dd497450cd04233b0711ac44b0c32 149 SUPERFAMILY SSF52833 7 149 1.67E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0607 078dd497450cd04233b0711ac44b0c32 149 Gene3D G3DSA:3.40.30.10 2 148 4.5E-40 T 11-10-2018 Rmag_0607 078dd497450cd04233b0711ac44b0c32 149 PIRSF PIRSF000239 2 149 6.9E-24 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 SUPERFAMILY SSF52540 102 317 2.7E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 SUPERFAMILY SSF50249 38 94 3.94E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 71 316 1.3E-74 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 Pfam PF03193 RsgA GTPase 92 258 1.1E-52 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 Gene3D G3DSA:3.40.50.300 91 258 5.0E-43 T 11-10-2018 Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 Gene3D G3DSA:1.10.40.50 260 318 7.2E-20 T 11-10-2018 Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 Gene3D G3DSA:2.40.50.140 34 90 1.8E-16 T 11-10-2018 Rmag_0589 5c8dc32f32cc7dbb2f2ea2a1b7f33768 318 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 37 318 31.817 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Rmag_0471 8d25284a215ec94585c5b229fe1d2ca9 379 Pfam PF01098 Cell cycle protein 23 372 3.9E-107 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0471 8d25284a215ec94585c5b229fe1d2ca9 379 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 330 354 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0471 8d25284a215ec94585c5b229fe1d2ca9 379 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 19 372 1.4E-122 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0471 8d25284a215ec94585c5b229fe1d2ca9 379 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 13 375 26.004 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 Gene3D G3DSA:3.10.400.10 4 189 7.8E-55 T 11-10-2018 Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 7 379 3.5E-115 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 Pfam PF14306 PUA-like domain 6 161 1.8E-50 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 SUPERFAMILY SSF52374 171 383 9.19E-78 T 11-10-2018 Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 SUPERFAMILY SSF88697 5 166 3.18E-46 T 11-10-2018 IPR015947 PUA-like superfamily Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 29 385 42.74 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 Gene3D G3DSA:3.40.50.620 190 389 4.8E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0085 80a83d999da972eb1486ebf6e35020fe 402 Pfam PF01747 ATP-sulfurylase 171 381 1.7E-83 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Rmag_0507 5c9bfd27b2668a525c9e6df5f3e05870 140 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 5 135 18.76 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Rmag_0507 5c9bfd27b2668a525c9e6df5f3e05870 140 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 7 133 7.4E-31 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Rmag_0507 5c9bfd27b2668a525c9e6df5f3e05870 140 SUPERFAMILY SSF48013 5 134 1.57E-30 T 11-10-2018 IPR035926 NusB-like superfamily Rmag_0507 5c9bfd27b2668a525c9e6df5f3e05870 140 Pfam PF01029 NusB family 9 131 5.8E-25 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Rmag_0507 5c9bfd27b2668a525c9e6df5f3e05870 140 Gene3D G3DSA:1.10.940.10 2 138 2.2E-34 T 11-10-2018 IPR035926 NusB-like superfamily Rmag_0414 933786eb48df1f7ee3086b6ef9c533f3 157 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 3 132 3.1E-38 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0414 933786eb48df1f7ee3086b6ef9c533f3 157 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0414 933786eb48df1f7ee3086b6ef9c533f3 157 Gene3D G3DSA:3.30.70.560 1 157 5.8E-51 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0414 933786eb48df1f7ee3086b6ef9c533f3 157 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 4 132 4.8E-35 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0414 933786eb48df1f7ee3086b6ef9c533f3 157 SUPERFAMILY SSF55083 2 150 6.93E-48 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Rmag_0734 e88732b13d5945ef9d3da93ce2af650b 152 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 111 20.255 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE Rmag_0734 e88732b13d5945ef9d3da93ce2af650b 152 Gene3D G3DSA:3.30.1450.10 36 123 8.6E-19 T 11-10-2018 IPR037873 BamE-like Rmag_0734 e88732b13d5945ef9d3da93ce2af650b 152 Pfam PF04355 SmpA / OmlA family 37 104 9.5E-19 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Rmag_0046 15fdd5164abc8d023bd45d6bab295a56 142 Pfam PF03652 Holliday junction resolvase 6 137 1.2E-37 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Rmag_0046 15fdd5164abc8d023bd45d6bab295a56 142 SMART SM00732 4 105 2.4E-22 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Rmag_0046 15fdd5164abc8d023bd45d6bab295a56 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 140 19.78 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Rmag_0046 15fdd5164abc8d023bd45d6bab295a56 142 Gene3D G3DSA:3.30.420.140 4 142 6.6E-36 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Rmag_0046 15fdd5164abc8d023bd45d6bab295a56 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 137 1.2E-31 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Rmag_0046 15fdd5164abc8d023bd45d6bab295a56 142 SUPERFAMILY SSF53098 5 138 8.04E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 Gene3D G3DSA:2.40.30.10 118 216 2.7E-24 T 11-10-2018 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 Gene3D G3DSA:3.40.50.80 217 349 4.4E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 SUPERFAMILY SSF52343 218 347 1.44E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 Pfam PF00175 Oxidoreductase NAD-binding domain 226 328 8.6E-21 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 218 5.5E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 161 5.5E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 250 259 5.5E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 165 172 5.5E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 225 244 5.5E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 314 322 5.5E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 Gene3D G3DSA:3.10.20.30 4 117 4.2E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 30 99 2.4E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 SUPERFAMILY SSF54292 17 109 1.97E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 Pfam PF00970 Oxidoreductase FAD-binding domain 122 215 1.1E-12 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Rmag_0764 bb09500c3d7e6d0d3afc803d9c4a6265 355 SUPERFAMILY SSF63380 119 215 4.54E-23 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Rmag_0958 b3e79e6dc0cfd53080ed925505afdd02 197 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 9 197 19.737 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Rmag_0958 b3e79e6dc0cfd53080ed925505afdd02 197 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 196 2.9E-59 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Rmag_0958 b3e79e6dc0cfd53080ed925505afdd02 197 SMART SM01207 12 189 1.9E-75 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Rmag_0958 b3e79e6dc0cfd53080ed925505afdd02 197 Pfam PF02660 Glycerol-3-phosphate acyltransferase 13 188 7.2E-48 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 1.0E-42 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 Pfam PF00203 Ribosomal protein S19 3 83 3.2E-35 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 Gene3D G3DSA:3.30.860.10 1 89 6.9E-39 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 PIRSF PIRSF002144 1 88 4.5E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.0E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.0E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.0E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 SUPERFAMILY SSF54570 3 84 2.62E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0169 f8eb133a7d4ceac3d5b18e8b5ede79e8 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.166 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_1076 be7f108fd32f1dc5bcf60a7e98cdbc8c 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 2.7E-63 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_1076 be7f108fd32f1dc5bcf60a7e98cdbc8c 248 Pfam PF00121 Triosephosphate isomerase 5 245 9.6E-92 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_1076 be7f108fd32f1dc5bcf60a7e98cdbc8c 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_1076 be7f108fd32f1dc5bcf60a7e98cdbc8c 248 SUPERFAMILY SSF51351 1 247 7.2E-87 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_1076 be7f108fd32f1dc5bcf60a7e98cdbc8c 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 58.868 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_1076 be7f108fd32f1dc5bcf60a7e98cdbc8c 248 Gene3D G3DSA:3.20.20.70 1 248 1.2E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0511 ea1e4c1e776b75002055c0763af84dd7 391 SUPERFAMILY SSF103473 1 382 2.22E-58 T 11-10-2018 IPR036259 MFS transporter superfamily Rmag_0511 ea1e4c1e776b75002055c0763af84dd7 391 Pfam PF07690 Major Facilitator Superfamily 13 186 5.9E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Rmag_0511 ea1e4c1e776b75002055c0763af84dd7 391 Pfam PF07690 Major Facilitator Superfamily 209 378 7.9E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Rmag_0511 ea1e4c1e776b75002055c0763af84dd7 391 Gene3D G3DSA:1.20.1250.20 1 383 1.0E-71 T 11-10-2018 Rmag_0622 f9ac643205e68501f84e07a94ae69af1 108 Pfam PF04358 DsrC like protein 5 102 1.2E-30 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0622 f9ac643205e68501f84e07a94ae69af1 108 Gene3D G3DSA:1.10.10.370 36 104 3.6E-21 T 11-10-2018 Rmag_0622 f9ac643205e68501f84e07a94ae69af1 108 PIRSF PIRSF006223 1 106 3.7E-31 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0622 f9ac643205e68501f84e07a94ae69af1 108 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 101 5.3E-27 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Rmag_0622 f9ac643205e68501f84e07a94ae69af1 108 SUPERFAMILY SSF69721 5 101 6.93E-28 T 11-10-2018 IPR025526 DsrC-like domain superfamily Rmag_0622 f9ac643205e68501f84e07a94ae69af1 108 Gene3D G3DSA:3.30.1420.10 4 33 8.5E-8 T 11-10-2018 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 48 317 5.8E-107 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 Gene3D G3DSA:3.40.50.300 108 306 7.6E-109 T 11-10-2018 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 Gene3D G3DSA:1.20.120.140 22 316 7.6E-109 T 11-10-2018 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 SUPERFAMILY SSF47364 21 98 4.58E-17 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 SMART SM00963 23 104 6.6E-16 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 Pfam PF00448 SRP54-type protein, GTPase domain 118 317 9.0E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 SMART SM00382 116 296 5.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 47 318 58.842 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 SUPERFAMILY SSF52540 112 317 4.37E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 Pfam PF02881 SRP54-type protein, helical bundle domain 34 100 4.7E-12 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 SMART SM00962 117 318 3.0E-112 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_0781 c453c05b57252ba30bd2541eb966700b 318 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 291 304 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 217 3.6E-96 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 PIRSF PIRSF001461 1 223 5.1E-101 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 SUPERFAMILY SSF51366 6 217 5.76E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 1.2E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Rmag_1071 1ecbd4e8a2823a48a168852dbd5f736d 223 Gene3D G3DSA:3.20.20.70 6 223 2.4E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0224 8452a8dfcb6469e97b3e9020bb8ab20c 171 SUPERFAMILY SSF75169 5 158 1.38E-19 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0224 8452a8dfcb6469e97b3e9020bb8ab20c 171 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 169 1.4E-46 T 11-10-2018 IPR032836 DsrE2-like family Rmag_0656 eef3ff79085f450f4a5f8a04c43defe2 615 SUPERFAMILY SSF109998 41 292 2.12E-18 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Rmag_0656 eef3ff79085f450f4a5f8a04c43defe2 615 SUPERFAMILY SSF54534 220 352 2.52E-30 T 11-10-2018 Rmag_0656 eef3ff79085f450f4a5f8a04c43defe2 615 Pfam PF13616 PPIC-type PPIASE domain 265 353 1.6E-25 T 11-10-2018 Rmag_0656 eef3ff79085f450f4a5f8a04c43defe2 615 Gene3D G3DSA:3.10.50.40 262 352 5.2E-32 T 11-10-2018 Rmag_0656 eef3ff79085f450f4a5f8a04c43defe2 615 Gene3D G3DSA:1.10.4030.10 36 164 2.4E-6 T 11-10-2018 Rmag_0656 eef3ff79085f450f4a5f8a04c43defe2 615 Pfam PF13624 SurA N-terminal domain 1 160 6.1E-34 T 11-10-2018 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 165 180 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 SUPERFAMILY SSF142019 5 237 3.27E-83 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 SMART SM00928 327 372 8.9E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 217 6.5E-45 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 Gene3D G3DSA:1.20.1440.230 325 421 8.6E-31 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 6 413 1.0E-189 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 SUPERFAMILY SSF140490 323 419 6.8E-36 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 329 410 4.6E-29 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 Gene3D G3DSA:3.10.20.600 230 324 4.0E-33 T 11-10-2018 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 340 351 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 SUPERFAMILY SSF142984 239 322 1.2E-24 T 11-10-2018 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 Gene3D G3DSA:3.40.50.11540 51 229 3.6E-76 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0242 89d49c67f864ae1c43288a36c4c55223 422 Pfam PF10531 SLBB domain 241 289 3.7E-16 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 Gene3D G3DSA:1.10.10.10 1 90 2.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 Gene3D G3DSA:3.40.190.10 91 289 2.5E-59 T 11-10-2018 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 Pfam PF03466 LysR substrate binding domain 88 292 6.8E-29 T 11-10-2018 IPR005119 LysR, substrate-binding Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 SUPERFAMILY SSF53850 88 294 8.84E-29 T 11-10-2018 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 Gene3D G3DSA:3.40.190.10 163 268 2.5E-59 T 11-10-2018 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Rmag_0986 c66c7988b7baca4266a86e71ce081e10 297 SUPERFAMILY SSF46785 1 111 2.79E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Rmag_0705 9b8b8dc83dcc74fdcadf342bac9c9485 518 SUPERFAMILY SSF161098 2 232 1.83E-38 T 11-10-2018 IPR035906 MetI-like superfamily Rmag_0705 9b8b8dc83dcc74fdcadf342bac9c9485 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 228 4.1E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Rmag_0705 9b8b8dc83dcc74fdcadf342bac9c9485 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 318 512 9.1E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Rmag_0705 9b8b8dc83dcc74fdcadf342bac9c9485 518 Gene3D G3DSA:1.10.3720.10 256 514 6.9E-29 T 11-10-2018 IPR035906 MetI-like superfamily Rmag_0705 9b8b8dc83dcc74fdcadf342bac9c9485 518 Gene3D G3DSA:1.10.3720.10 1 243 9.5E-47 T 11-10-2018 IPR035906 MetI-like superfamily Rmag_0705 9b8b8dc83dcc74fdcadf342bac9c9485 518 SUPERFAMILY SSF161098 258 507 1.2E-32 T 11-10-2018 IPR035906 MetI-like superfamily Rmag_0061 93df308d275a8f143e18bc0fd8502e7d 201 SUPERFAMILY SSF52540 5 199 3.22E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0061 93df308d275a8f143e18bc0fd8502e7d 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 190 6.1E-44 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Rmag_0061 93df308d275a8f143e18bc0fd8502e7d 201 Pfam PF01121 Dephospho-CoA kinase 6 183 8.0E-50 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Rmag_0061 93df308d275a8f143e18bc0fd8502e7d 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 201 22.23 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Rmag_0061 93df308d275a8f143e18bc0fd8502e7d 201 Gene3D G3DSA:3.40.50.300 1 201 2.0E-57 T 11-10-2018 Rmag_0971 311ce9e9b7c43429d8793eb32a8c96a5 185 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 179 1.1E-32 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Rmag_0971 311ce9e9b7c43429d8793eb32a8c96a5 185 Gene3D G3DSA:3.40.50.10420 1 185 9.4E-46 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Rmag_0971 311ce9e9b7c43429d8793eb32a8c96a5 185 PIRSF PIRSF006806 1 182 1.7E-35 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Rmag_0971 311ce9e9b7c43429d8793eb32a8c96a5 185 SUPERFAMILY SSF100950 2 184 2.23E-46 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Rmag_0971 311ce9e9b7c43429d8793eb32a8c96a5 185 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 179 6.4E-42 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 SUPERFAMILY SSF56655 1 259 2.62E-86 T 11-10-2018 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 9.3E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 9.3E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 9.3E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 9.3E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 6.6E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 6.6E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 6.6E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 6.6E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.6E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.6E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 Gene3D G3DSA:3.30.540.10 1 139 9.7E-51 T 11-10-2018 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 Pfam PF00459 Inositol monophosphatase family 2 256 1.4E-67 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Rmag_0491 578aa1e47c8d42ebf1e3337aa87b6c2a 266 Gene3D G3DSA:3.40.190.80 141 266 6.6E-38 T 11-10-2018 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 323 486 1.3E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 PIRSF PIRSF001394 1 495 5.9E-195 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 10 280 2.4E-63 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 Pfam PF05683 Fumarase C-terminus 287 487 1.5E-79 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 Pfam PF05681 Fumarate hydratase (Fumerase) 10 283 1.3E-96 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 SUPERFAMILY SSF117457 316 486 2.09E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Rmag_0793 a98c40ec5de4de977d6db7669b5bb08f 496 Gene3D G3DSA:3.20.130.10 302 487 2.4E-59 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 SUPERFAMILY SSF51735 206 383 2.54E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 SUPERFAMILY SSF52283 18 465 9.64E-103 T 11-10-2018 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 Gene3D G3DSA:3.40.50.1480 157 212 1.1E-19 T 11-10-2018 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 Gene3D G3DSA:3.40.50.1480 380 465 5.4E-30 T 11-10-2018 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 SMART SM00996 19 464 4.3E-266 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 Gene3D G3DSA:3.40.50.720 213 379 3.6E-67 T 11-10-2018 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 19 156 3.5E-68 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 PIRSF PIRSF001109 6 465 1.4E-174 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 206 382 2.6E-56 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 228 244 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 Gene3D G3DSA:3.40.50.1480 2 156 2.8E-65 T 11-10-2018 Rmag_0739 4e6a6cd2d300f946b09cb95264d1dc36 465 SMART SM00997 206 382 3.3E-79 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Rmag_0869 75498127c99623edfa910f131f025a2a 357 Gene3D G3DSA:3.30.70.3340 4 122 8.2E-42 T 11-10-2018 Rmag_0869 75498127c99623edfa910f131f025a2a 357 SUPERFAMILY SSF54862 168 247 5.53E-8 T 11-10-2018 Rmag_0869 75498127c99623edfa910f131f025a2a 357 Gene3D G3DSA:3.30.413.10 124 343 1.8E-88 T 11-10-2018 Rmag_0869 75498127c99623edfa910f131f025a2a 357 Gene3D G3DSA:3.30.70.20 190 250 1.8E-88 T 11-10-2018 Rmag_0869 75498127c99623edfa910f131f025a2a 357 SUPERFAMILY SSF56014 117 342 5.23E-32 T 11-10-2018 Rmag_0869 75498127c99623edfa910f131f025a2a 357 SUPERFAMILY SSF55124 6 125 3.2E-42 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0869 75498127c99623edfa910f131f025a2a 357 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 44 111 1.3E-8 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0869 75498127c99623edfa910f131f025a2a 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 235 246 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0869 75498127c99623edfa910f131f025a2a 357 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 335 4.5E-23 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Rmag_0869 75498127c99623edfa910f131f025a2a 357 TIGRFAM TIGR02066 dsrB: sulfite reductase, dissimilatory-type beta subunit 24 357 1.6E-151 T 11-10-2018 IPR011808 Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0018551|GO:0051539 KEGG: 00633+1.8.99.5|KEGG: 00920+1.8.99.5|MetaCyc: PWY-5306|MetaCyc: PWY-5360 Rmag_0326 2f234a117337d67b1f5ff7a8f5664dfc 110 Gene3D G3DSA:3.30.460.10 1 110 1.0E-28 T 11-10-2018 Rmag_0326 2f234a117337d67b1f5ff7a8f5664dfc 110 SUPERFAMILY SSF81301 1 107 4.25E-30 T 11-10-2018 Rmag_0326 2f234a117337d67b1f5ff7a8f5664dfc 110 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 2.5E-30 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Rmag_0326 2f234a117337d67b1f5ff7a8f5664dfc 110 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 2.1E-20 T 11-10-2018 Rmag_0326 2f234a117337d67b1f5ff7a8f5664dfc 110 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 20.17 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Rmag_0082 6297a75745ad488d43b545fed4f1d413 193 Gene3D G3DSA:3.20.20.70 3 193 3.7E-47 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0082 6297a75745ad488d43b545fed4f1d413 193 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 193 18.992 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Rmag_0082 6297a75745ad488d43b545fed4f1d413 193 Pfam PF02581 Thiamine monophosphate synthase 10 187 1.3E-48 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Rmag_0082 6297a75745ad488d43b545fed4f1d413 193 SUPERFAMILY SSF51391 7 190 2.75E-48 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Rmag_0082 6297a75745ad488d43b545fed4f1d413 193 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 191 6.9E-47 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 Gene3D G3DSA:3.30.470.20 91 438 2.8E-148 T 11-10-2018 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 7 451 3.2E-224 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 Pfam PF02785 Biotin carboxylase C-terminal domain 341 446 6.5E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 114 3.5E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 SUPERFAMILY SSF52440 3 118 5.76E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 327 1.9E-76 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 Gene3D G3DSA:3.40.50.20 3 90 5.8E-36 T 11-10-2018 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 SMART SM00878 341 446 3.7E-57 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 SUPERFAMILY SSF51246 336 449 2.35E-40 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 Gene3D G3DSA:3.30.1490.20 136 208 2.8E-148 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Rmag_1060 a98fa1aebf811d99986e692ee01894c0 454 SUPERFAMILY SSF56059 88 350 3.01E-63 T 11-10-2018 Rmag_0878 6f3d8590b16c55c8e30ff0fa054983d1 89 Pfam PF00403 Heavy-metal-associated domain 3 60 6.8E-7 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Rmag_0878 6f3d8590b16c55c8e30ff0fa054983d1 89 SUPERFAMILY SSF55008 3 61 1.31E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Rmag_0878 6f3d8590b16c55c8e30ff0fa054983d1 89 Gene3D G3DSA:3.30.70.100 1 62 3.3E-9 T 11-10-2018 Rmag_0878 6f3d8590b16c55c8e30ff0fa054983d1 89 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Rmag_0048 f75460a2dbaebbae9b32f51a40955f9f 308 PIRSF PIRSF006268 1 306 6.7E-77 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Rmag_0048 f75460a2dbaebbae9b32f51a40955f9f 308 Pfam PF02424 ApbE family 30 290 4.4E-79 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Rmag_0048 f75460a2dbaebbae9b32f51a40955f9f 308 SUPERFAMILY SSF143631 23 302 6.15E-84 T 11-10-2018 IPR003374 ApbE-like superfamily Rmag_0048 f75460a2dbaebbae9b32f51a40955f9f 308 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 15 106 2.8E-7 T 11-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 Rmag_0048 f75460a2dbaebbae9b32f51a40955f9f 308 Gene3D G3DSA:3.10.520.20 15 306 1.8E-92 T 11-10-2018 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 192 8.7E-9 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Rmag_0435 0bad9491d6de16af124393a8224d9506 267 Gene3D G3DSA:3.40.50.10860 4 253 1.2E-76 T 11-10-2018 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 265 2.6E-85 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 Gene3D G3DSA:3.40.50.720 115 234 1.2E-76 T 11-10-2018 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 SUPERFAMILY SSF53223 2 100 1.04E-27 T 11-10-2018 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 266 29.306 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 3.4E-24 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Rmag_0435 0bad9491d6de16af124393a8224d9506 267 SUPERFAMILY SSF51735 101 265 1.03E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0587 f45fde021e28f919b53ad74d57a3f614 416 Gene3D G3DSA:3.30.2010.10 205 286 1.5E-32 T 11-10-2018 Rmag_0587 f45fde021e28f919b53ad74d57a3f614 416 Pfam PF01435 Peptidase family M48 210 414 4.2E-39 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Rmag_0587 f45fde021e28f919b53ad74d57a3f614 416 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 36 206 7.2E-53 T 11-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 Rmag_0982 a8ad047cf8f5c0e0cb721156eea8ad27 250 Gene3D G3DSA:2.30.30.100 204 247 1.1E-6 T 11-10-2018 Rmag_0982 a8ad047cf8f5c0e0cb721156eea8ad27 250 Pfam PF03099 Biotin/lipoate A/B protein ligase family 21 141 6.5E-16 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Rmag_0982 a8ad047cf8f5c0e0cb721156eea8ad27 250 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 19 248 4.2E-53 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Rmag_0982 a8ad047cf8f5c0e0cb721156eea8ad27 250 Gene3D G3DSA:3.30.930.10 5 202 3.5E-49 T 11-10-2018 Rmag_0982 a8ad047cf8f5c0e0cb721156eea8ad27 250 SUPERFAMILY SSF55681 12 201 5.8E-47 T 11-10-2018 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 85 9.0E-23 T 11-10-2018 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 SMART SM01387 5 85 2.9E-42 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 Gene3D G3DSA:1.10.287.10 2 86 4.1E-32 T 11-10-2018 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 86 1.4E-36 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 SUPERFAMILY SSF47060 4 86 1.71E-31 T 11-10-2018 IPR009068 S15/NS1, RNA-binding Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 Pfam PF00312 Ribosomal protein S15 6 85 1.1E-33 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0293 ddc2192d7fee888ce82304225dec7d6d 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 20.772 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0441 baf937f4b4afacf3ba6f84fc1dc44b1e 152 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 5 148 2.7E-48 T 11-10-2018 IPR008136 CinA, C-terminal Rmag_0441 baf937f4b4afacf3ba6f84fc1dc44b1e 152 SUPERFAMILY SSF142433 3 149 9.68E-51 T 11-10-2018 IPR036653 CinA-like, C-terminal Rmag_0441 baf937f4b4afacf3ba6f84fc1dc44b1e 152 Pfam PF02464 Competence-damaged protein 3 148 5.3E-52 T 11-10-2018 IPR008136 CinA, C-terminal Rmag_0441 baf937f4b4afacf3ba6f84fc1dc44b1e 152 Gene3D G3DSA:3.90.950.20 1 151 5.5E-53 T 11-10-2018 IPR036653 CinA-like, C-terminal Rmag_0555 f05c86845114957efdb69419f5bd0c8d 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 145 34.761 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_0555 f05c86845114957efdb69419f5bd0c8d 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3 142 6.8E-63 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_0555 f05c86845114957efdb69419f5bd0c8d 147 Gene3D G3DSA:3.10.129.10 1 146 3.2E-59 T 11-10-2018 Rmag_0555 f05c86845114957efdb69419f5bd0c8d 147 Pfam PF07977 FabA-like domain 12 137 1.7E-37 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Rmag_0555 f05c86845114957efdb69419f5bd0c8d 147 SUPERFAMILY SSF54637 2 142 8.22E-48 T 11-10-2018 IPR029069 HotDog domain superfamily Rmag_0913 04959c80254cf712badc543fadc3a86d 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 355 3.5E-60 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Rmag_0913 04959c80254cf712badc543fadc3a86d 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 356 1.0E-100 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Rmag_0825 f322a38b8d283dd0a6c9ab7639b1cf04 193 Gene3D G3DSA:3.40.109.10 2 192 1.0E-23 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Rmag_0825 f322a38b8d283dd0a6c9ab7639b1cf04 193 SUPERFAMILY SSF55469 8 192 3.14E-34 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Rmag_0825 f322a38b8d283dd0a6c9ab7639b1cf04 193 Pfam PF00881 Nitroreductase family 15 171 2.8E-9 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 Pfam PF01715 IPP transferase 43 286 5.4E-78 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 Gene3D G3DSA:3.40.50.300 13 288 3.8E-93 T 11-10-2018 Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 Gene3D G3DSA:1.10.20.140 116 187 3.8E-93 T 11-10-2018 Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 SUPERFAMILY SSF52540 7 222 1.58E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 SUPERFAMILY SSF52540 9 153 8.75E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 293 4.2E-94 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Rmag_0765 b37e9d23e3870fe7e77de4989d6bff37 305 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 304 27.234 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 291 29.213 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 280 2.0E-83 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 Gene3D G3DSA:1.20.1640.10 100 295 1.7E-12 T 11-10-2018 Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 SUPERFAMILY SSF82866 81 288 4.45E-40 T 11-10-2018 Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 111 277 2.9E-56 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 PRINTS PR01755 Bacterial translocase SecF protein signature 196 214 4.2E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 4.2E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 PRINTS PR01755 Bacterial translocase SecF protein signature 228 243 4.2E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 PRINTS PR01755 Bacterial translocase SecF protein signature 148 162 4.2E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 Pfam PF02355 Protein export membrane protein 110 287 2.1E-70 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Rmag_1005 61a36c48bbdd30f64284ab975f8e4902 308 Pfam PF07549 SecD/SecF GG Motif 33 60 2.6E-10 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 Gene3D G3DSA:3.30.1700.10 127 301 1.8E-60 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 Gene3D G3DSA:3.30.230.20 1 126 1.9E-44 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 SUPERFAMILY SSF54211 133 276 5.46E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 278 41.791 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 290 7.8E-102 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 SUPERFAMILY SSF54211 3 123 6.68E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0444 66f265d50e63b70b65205e98fbdb3d60 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 1.6E-99 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 Gene3D G3DSA:3.30.43.10 1 63 9.9E-16 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 SUPERFAMILY SSF56194 170 269 6.8E-33 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 270 70.967 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 Gene3D G3DSA:3.90.78.10 188 270 3.6E-31 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 174 269 4.1E-29 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 268 2.3E-61 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 SUPERFAMILY SSF56176 3 174 6.18E-37 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 Gene3D G3DSA:3.30.465.10 64 187 3.8E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Rmag_0758 45d40fa34d789d582c61290a7cd509d0 270 Pfam PF01565 FAD binding domain 20 136 1.0E-19 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Rmag_0311 6013bf5080dae1f4540977b906de10c1 77 Gene3D G3DSA:3.30.70.20 2 77 8.9E-31 T 11-10-2018 Rmag_0311 6013bf5080dae1f4540977b906de10c1 77 SUPERFAMILY SSF54862 5 71 2.43E-18 T 11-10-2018 Rmag_0311 6013bf5080dae1f4540977b906de10c1 77 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0311 6013bf5080dae1f4540977b906de10c1 77 Pfam PF12838 4Fe-4S dicluster domain 9 57 6.8E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 Gene3D G3DSA:3.40.50.150 1 186 3.4E-63 T 11-10-2018 Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 Gene3D G3DSA:1.10.8.100 187 246 6.6E-17 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 244 9.1E-81 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 Pfam PF00398 Ribosomal RNA adenine dimethylase 2 243 3.1E-62 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 SUPERFAMILY SSF53335 1 248 6.41E-73 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 SMART SM00650 18 185 1.1E-75 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Rmag_0547 f24e567fd78bb2a0752a15ad07f1bb6d 250 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 247 51.457 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Rmag_0733 cd274806c8a9ee0c02fc69c46351fa62 135 SUPERFAMILY SSF46785 4 133 1.53E-42 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Rmag_0733 cd274806c8a9ee0c02fc69c46351fa62 135 Pfam PF01475 Ferric uptake regulator family 9 128 4.0E-43 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Rmag_0733 cd274806c8a9ee0c02fc69c46351fa62 135 Gene3D G3DSA:1.10.10.10 1 82 1.2E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0733 cd274806c8a9ee0c02fc69c46351fa62 135 Gene3D G3DSA:3.30.1490.190 84 135 4.2E-22 T 11-10-2018 Rmag_0987 55473798420160f6b52e8ceb3e609f9a 647 SUPERFAMILY SSF116726 361 436 4.32E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0987 55473798420160f6b52e8ceb3e609f9a 647 SUPERFAMILY SSF116726 265 342 1.44E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0987 55473798420160f6b52e8ceb3e609f9a 647 Gene3D G3DSA:3.30.70.1450 251 343 5.9E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0987 55473798420160f6b52e8ceb3e609f9a 647 Pfam PF02080 TrkA-C domain 272 340 2.5E-6 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Rmag_0987 55473798420160f6b52e8ceb3e609f9a 647 Gene3D G3DSA:3.30.70.1450 365 439 6.0E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Rmag_0987 55473798420160f6b52e8ceb3e609f9a 647 Pfam PF03600 Citrate transporter 41 596 4.4E-50 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 PIRSF PIRSF001413 1 401 1.0E-165 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 Gene3D G3DSA:3.40.50.1100 15 210 6.0E-184 T 11-10-2018 Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 Gene3D G3DSA:3.40.50.1100 58 390 6.0E-184 T 11-10-2018 Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 384 5.2E-46 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 SUPERFAMILY SSF53686 7 394 4.32E-147 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 397 52.64 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_1031 3d3abd4a4f690530ea6d9b1bdab19d4a 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 395 6.8E-190 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Rmag_0524 aadbf3ad4819eada1f545810608d6f94 378 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0524 aadbf3ad4819eada1f545810608d6f94 378 SUPERFAMILY SSF47240 3 340 1.19E-102 T 11-10-2018 IPR009078 Ferritin-like superfamily Rmag_0524 aadbf3ad4819eada1f545810608d6f94 378 Gene3D G3DSA:1.10.620.20 2 340 5.4E-127 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Rmag_0524 aadbf3ad4819eada1f545810608d6f94 378 Pfam PF00268 Ribonucleotide reductase, small chain 34 332 7.8E-46 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 5.4E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 5.4E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 5.4E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 5.4E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 PRINTS PR01041 Methionyl-tRNA synthetase signature 381 392 5.4E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 5.4E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 531 7.8E-180 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 Pfam PF09334 tRNA synthetases class I (M) 6 393 7.0E-157 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 Gene3D G3DSA:2.20.28.20 140 174 2.6E-153 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 SUPERFAMILY SSF52374 4 384 4.46E-98 T 11-10-2018 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 Gene3D G3DSA:3.40.50.620 6 376 2.6E-153 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 SUPERFAMILY SSF47323 387 543 1.55E-40 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 Pfam PF08264 Anticodon-binding domain of tRNA 414 497 3.8E-6 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 Gene3D G3DSA:1.10.730.10 377 536 1.7E-34 T 11-10-2018 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 SUPERFAMILY SSF57770 140 173 2.09E-11 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0570 9dd22a959ae88fad917f829b7ac50dd1 550 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 541 39.398 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 386 5.6E-113 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 Gene3D G3DSA:3.50.50.60 4 335 3.7E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 Pfam PF01494 FAD binding domain 3 335 1.1E-17 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 Gene3D G3DSA:3.30.9.50 78 267 3.7E-80 T 11-10-2018 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.8E-9 T 11-10-2018 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.8E-9 T 11-10-2018 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.8E-9 T 11-10-2018 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.8E-9 T 11-10-2018 Rmag_0433 a08a9ff9099f97c34745dd795616aeda 397 SUPERFAMILY SSF51905 3 381 5.94E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0090 84a988c176a0e7e1e4392c967293df13 168 Gene3D G3DSA:2.40.10.330 73 123 1.3E-26 T 11-10-2018 Rmag_0090 84a988c176a0e7e1e4392c967293df13 168 Gene3D G3DSA:3.10.50.40 5 152 1.3E-26 T 11-10-2018 Rmag_0090 84a988c176a0e7e1e4392c967293df13 168 SUPERFAMILY SSF54534 6 141 3.53E-12 T 11-10-2018 Rmag_0186 758e14a8ef06a4be4c440c56b80894dc 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 8.0E-23 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0186 758e14a8ef06a4be4c440c56b80894dc 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0186 758e14a8ef06a4be4c440c56b80894dc 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 19 37 0.005 T 11-10-2018 Rmag_0186 758e14a8ef06a4be4c440c56b80894dc 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.663 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0186 758e14a8ef06a4be4c440c56b80894dc 37 SUPERFAMILY SSF57840 1 37 4.05E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0186 758e14a8ef06a4be4c440c56b80894dc 37 Pfam PF00444 Ribosomal protein L36 1 37 1.3E-18 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 11 297 3.7E-145 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 SUPERFAMILY SSF55681 11 290 2.49E-125 T 11-10-2018 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 Gene3D G3DSA:3.30.930.10 4 213 2.3E-108 T 11-10-2018 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 12 288 3.4E-145 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 10 290 57.074 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 Gene3D G3DSA:1.20.58.180 214 295 3.3E-29 T 11-10-2018 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 165 180 3.2E-63 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 85 105 3.2E-63 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 142 162 3.2E-63 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 250 266 3.2E-63 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 64 79 3.2E-63 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0740 5edf2b6be3a83245127fd33e6a5cff9a 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 116 140 3.2E-63 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Rmag_0885 2c1078d1163cc4b6b0e62ae9992d78bb 276 SUPERFAMILY SSF53448 2 271 5.86E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0885 2c1078d1163cc4b6b0e62ae9992d78bb 276 Gene3D G3DSA:3.90.550.10 1 275 2.0E-80 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0885 2c1078d1163cc4b6b0e62ae9992d78bb 276 Pfam PF00483 Nucleotidyl transferase 9 269 7.4E-28 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Rmag_0885 2c1078d1163cc4b6b0e62ae9992d78bb 276 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 265 9.1E-117 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Rmag_0317 61a51710ec224ec6ee4557fa56d6acf7 433 Gene3D G3DSA:1.20.1250.20 226 430 4.1E-9 T 11-10-2018 Rmag_0317 61a51710ec224ec6ee4557fa56d6acf7 433 SUPERFAMILY SSF103473 13 429 5.36E-29 T 11-10-2018 IPR036259 MFS transporter superfamily Rmag_0317 61a51710ec224ec6ee4557fa56d6acf7 433 Gene3D G3DSA:1.20.1250.20 6 211 1.7E-8 T 11-10-2018 Rmag_0317 61a51710ec224ec6ee4557fa56d6acf7 433 Pfam PF07690 Major Facilitator Superfamily 16 379 1.8E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Rmag_0736 3f011d98c99a4efdcdbd5901b1de2844 198 Gene3D G3DSA:3.40.50.300 1 198 4.5E-40 T 11-10-2018 Rmag_0736 3f011d98c99a4efdcdbd5901b1de2844 198 SMART SM00382 26 196 0.008 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0736 3f011d98c99a4efdcdbd5901b1de2844 198 Pfam PF00005 ABC transporter 18 155 3.0E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0736 3f011d98c99a4efdcdbd5901b1de2844 198 SUPERFAMILY SSF52540 2 190 9.08E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0736 3f011d98c99a4efdcdbd5901b1de2844 198 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0736 3f011d98c99a4efdcdbd5901b1de2844 198 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 197 2.9E-63 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 PIRSF PIRSF003095 1 429 5.4E-97 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Gene3D G3DSA:3.10.50.40 150 246 1.5E-68 T 11-10-2018 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 413 4.8E-27 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.6E-35 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 TIGRFAM TIGR00115 tig: trigger factor 12 413 1.5E-109 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 SUPERFAMILY SSF102735 1 131 1.96E-35 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 SUPERFAMILY SSF109998 248 428 2.09E-34 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Gene3D G3DSA:1.10.3120.10 116 418 1.5E-68 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Hamap MF_00303 Trigger factor [tig]. 1 419 18.507 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 2.3E-9 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 Gene3D G3DSA:3.30.70.1050 1 115 4.0E-33 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Rmag_0204 aa3ad16855833d5855ed3ed49fc20627 429 SUPERFAMILY SSF54534 90 240 1.12E-23 T 11-10-2018 Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 Hamap MF_00328 Guanylate kinase [gmk]. 2 185 33.471 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 Pfam PF00625 Guanylate kinase 7 183 1.3E-49 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 SMART SM00072 3 185 2.6E-53 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 Gene3D G3DSA:3.40.50.300 8 181 2.9E-60 T 11-10-2018 Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 182 1.8E-68 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 Gene3D G3DSA:3.30.63.10 35 94 2.9E-60 T 11-10-2018 Rmag_0559 c648aeaddb63cb7e1d83dde79c78e10c 203 SUPERFAMILY SSF52540 3 187 7.54E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 PIRSF PIRSF005917 1 276 7.5E-94 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 Gene3D G3DSA:3.40.1010.10 1 111 1.9E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 35.503 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 Gene3D G3DSA:3.30.950.10 112 231 5.6E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 272 8.1E-81 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 SUPERFAMILY SSF53790 3 223 2.49E-77 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Rmag_0059 43faf3291f00dccff52d5761ff0a5063 276 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 204 1.5E-24 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 SUPERFAMILY SSF51984 12 99 1.31E-28 T 11-10-2018 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 460 2.6E-160 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Pfam PF01225 Mur ligase family, catalytic domain 15 111 1.6E-24 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Gene3D G3DSA:3.40.1190.10 101 315 2.3E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 408 4.4E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Gene3D G3DSA:3.90.190.20 316 468 1.3E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 SUPERFAMILY SSF53623 98 316 1.7E-68 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 12 469 39.779 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 SUPERFAMILY SSF53244 317 460 2.01E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Gene3D G3DSA:3.40.50.720 13 99 6.5E-31 T 11-10-2018 Rmag_0757 a2afe82181dc713e84ebd87214efecb1 469 Pfam PF08245 Mur ligase middle domain 117 297 9.0E-27 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 SUPERFAMILY SSF54631 265 324 8.47E-11 T 11-10-2018 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 Gene3D G3DSA:3.40.50.10490 6 199 7.1E-60 T 11-10-2018 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 PIRSF PIRSF004692 2 327 1.7E-121 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 Pfam PF01380 SIS domain 47 174 1.0E-27 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 4.6E-103 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 Pfam PF00571 CBS domain 272 324 2.5E-6 T 11-10-2018 IPR000644 CBS domain Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 Pfam PF00571 CBS domain 213 260 8.4E-6 T 11-10-2018 IPR000644 CBS domain Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 Gene3D G3DSA:3.10.580.10 200 324 1.7E-39 T 11-10-2018 Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 SMART SM00116 213 261 2.5E-5 T 11-10-2018 IPR000644 CBS domain Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 SMART SM00116 278 326 5.0 T 11-10-2018 IPR000644 CBS domain Rmag_0158 359457b119dc7375f49ec5e2b21d7998 327 SUPERFAMILY SSF53697 7 260 1.82E-61 T 11-10-2018 Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 Gene3D G3DSA:3.40.50.300 4 189 4.5E-25 T 11-10-2018 Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 244 430 5.6E-34 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 Gene3D G3DSA:2.60.300.12 445 555 3.5E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 SUPERFAMILY SSF52540 1 197 1.52E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 Pfam PF13500 AAA domain 70 183 1.2E-12 T 11-10-2018 Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 SUPERFAMILY SSF52317 241 450 2.59E-28 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 12 446 2.9E-124 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 Gene3D G3DSA:3.40.50.880 225 444 4.0E-8 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0858 a19d5b95d002d6ff7a0dc99d8cf80c79 566 SUPERFAMILY SSF89360 454 547 2.94E-8 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 367 1.2E-61 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 Gene3D G3DSA:3.40.50.1950 1 187 5.1E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 SUPERFAMILY SSF102645 185 394 8.63E-67 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 Pfam PF02441 Flavoprotein 7 179 4.8E-44 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 Gene3D G3DSA:3.40.50.10300 188 396 1.7E-69 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 391 3.5E-132 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Rmag_0801 5f528acdf55c630fc712586864ddeb79 397 SUPERFAMILY SSF52507 1 177 4.19E-56 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Rmag_1039 31883c5a0ee3d2107e0e4ce49418dd0d 71 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 71 2.4E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Rmag_1039 31883c5a0ee3d2107e0e4ce49418dd0d 71 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 22.928 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Rmag_1039 31883c5a0ee3d2107e0e4ce49418dd0d 71 Pfam PF01809 Haemolytic domain 4 68 1.0E-27 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Rmag_1039 31883c5a0ee3d2107e0e4ce49418dd0d 71 SMART SM01234 1 68 1.8E-40 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Rmag_1039 31883c5a0ee3d2107e0e4ce49418dd0d 71 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 2.0E-14 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SUPERFAMILY SSF81901 51 234 4.27E-40 T 11-10-2018 Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 203 234 0.53 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 134 166 2.8E-6 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 169 199 0.011 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 332 363 0.18 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 98 132 2.5E-6 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 367 393 0.015 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Pfam PF08238 Sel1 repeat 61 96 2.4E-5 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Gene3D G3DSA:1.25.40.10 315 414 3.9E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Gene3D G3DSA:1.25.40.10 134 259 4.0E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SUPERFAMILY SSF81901 317 402 7.46E-15 T 11-10-2018 Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 Gene3D G3DSA:1.25.40.10 16 133 5.8E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 201 236 1.0 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 97 132 1.7E-8 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 329 364 0.11 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 61 96 4.4E-9 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 169 200 6.2E-6 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 365 400 5.7E-6 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0149 0a11b7250fdf4bbb6ce7a3111d85c9d5 414 SMART SM00671 133 168 4.4E-7 T 11-10-2018 IPR006597 Sel1-like repeat Rmag_0152 34d7a5af67719b674273ab3f469e7b7c 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 56 78 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Rmag_0152 34d7a5af67719b674273ab3f469e7b7c 194 Gene3D G3DSA:1.20.120.1760 1 193 1.4E-15 T 11-10-2018 Rmag_0152 34d7a5af67719b674273ab3f469e7b7c 194 PIRSF PIRSF000847 1 194 2.6E-40 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Rmag_0152 34d7a5af67719b674273ab3f469e7b7c 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 78 1.8E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Rmag_0152 34d7a5af67719b674273ab3f469e7b7c 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 190 1.3E-44 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Rmag_0954 1a953a14aec20ce97c30fd21bb3b8395 250 SUPERFAMILY SSF53613 4 240 2.13E-48 T 11-10-2018 IPR029056 Ribokinase-like Rmag_0954 1a953a14aec20ce97c30fd21bb3b8395 250 Pfam PF08543 Phosphomethylpyrimidine kinase 12 240 6.3E-50 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Rmag_0954 1a953a14aec20ce97c30fd21bb3b8395 250 Gene3D G3DSA:3.40.1190.20 2 248 4.5E-54 T 11-10-2018 IPR029056 Ribokinase-like Rmag_0173 408c501f7a19ed42d709283085ff7b06 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.535 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0173 408c501f7a19ed42d709283085ff7b06 62 Pfam PF00831 Ribosomal L29 protein 4 60 1.6E-16 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0173 408c501f7a19ed42d709283085ff7b06 62 SUPERFAMILY SSF46561 1 61 2.75E-16 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0173 408c501f7a19ed42d709283085ff7b06 62 Gene3D G3DSA:1.10.287.310 1 62 3.3E-19 T 11-10-2018 Rmag_0173 408c501f7a19ed42d709283085ff7b06 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.2E-13 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 SUPERFAMILY SSF56042 169 332 2.24E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 161 2.3E-14 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 SUPERFAMILY SSF55326 5 168 2.88E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 Gene3D G3DSA:3.30.1330.10 3 168 2.0E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 333 45.415 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 5 325 2.5E-136 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 Gene3D G3DSA:3.90.650.10 169 333 5.2E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Rmag_0266 48fc7ad716ef4065f5787b9c571b79e6 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 332 1.7E-31 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 Pfam PF00364 Biotin-requiring enzyme 61 134 6.0E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 SUPERFAMILY SSF51230 59 134 5.1E-22 T 11-10-2018 IPR011053 Single hybrid motif Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 40 135 4.8E-34 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 109 5.6E-13 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 95 5.6E-13 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 64 77 5.6E-13 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Rmag_1059 4eefcaca89a6a82dcc6614a88dc08b07 135 Gene3D G3DSA:2.40.50.100 57 134 6.0E-25 T 11-10-2018 Rmag_0257 d7ff6264ab04a1b42223697c6a0a9407 262 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 1 249 28.949 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Rmag_0257 d7ff6264ab04a1b42223697c6a0a9407 262 Gene3D G3DSA:3.40.50.150 3 235 8.1E-30 T 11-10-2018 Rmag_0257 d7ff6264ab04a1b42223697c6a0a9407 262 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 7 249 6.3E-69 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Rmag_0257 d7ff6264ab04a1b42223697c6a0a9407 262 Pfam PF08241 Methyltransferase domain 44 133 5.6E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Rmag_0257 d7ff6264ab04a1b42223697c6a0a9407 262 SUPERFAMILY SSF53335 7 249 7.67E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0183 400d56ececc394529664e889fb4d6409 106 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 53 106 9.0E-23 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0183 400d56ececc394529664e889fb4d6409 106 Gene3D G3DSA:3.30.1390.20 49 106 1.3E-21 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Rmag_0183 400d56ececc394529664e889fb4d6409 106 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 47 106 20.046 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0183 400d56ececc394529664e889fb4d6409 106 SUPERFAMILY SSF55129 52 106 4.32E-18 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Rmag_0183 400d56ececc394529664e889fb4d6409 106 Pfam PF00327 Ribosomal protein L30p/L7e 54 101 5.2E-16 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Pfam PF07676 WD40-like Beta Propeller Repeat 273 309 5.1E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Pfam PF07676 WD40-like Beta Propeller Repeat 364 389 6.0E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Pfam PF07676 WD40-like Beta Propeller Repeat 234 264 0.0018 T 11-10-2018 IPR011659 WD40-like Beta Propeller Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Pfam PF07676 WD40-like Beta Propeller Repeat 187 219 0.0047 T 11-10-2018 IPR011659 WD40-like Beta Propeller Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 420 1.1E-122 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Gene3D G3DSA:2.120.10.30 155 424 2.3E-70 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Pfam PF04052 TolB amino-terminal domain 20 118 3.9E-19 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Gene3D G3DSA:3.40.50.10070 18 154 2.9E-28 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 SUPERFAMILY SSF52964 30 151 4.45E-26 T 11-10-2018 Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 419 44.537 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Rmag_0515 349a482d91d8479f441a8f5f5a6a7483 424 SUPERFAMILY SSF69304 152 420 5.36E-42 T 11-10-2018 Rmag_1020 4d902b71f2a398cfa9bbdc10b6e9a78d 201 SUPERFAMILY SSF52972 2 190 2.68E-50 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Rmag_1020 4d902b71f2a398cfa9bbdc10b6e9a78d 201 Hamap MF_00528 Septum formation protein Maf [maf]. 3 196 26.052 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Rmag_1020 4d902b71f2a398cfa9bbdc10b6e9a78d 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 189 1.4E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Rmag_1020 4d902b71f2a398cfa9bbdc10b6e9a78d 201 PIRSF PIRSF006305 1 199 7.9E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Rmag_1020 4d902b71f2a398cfa9bbdc10b6e9a78d 201 Pfam PF02545 Maf-like protein 4 191 1.9E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Rmag_1020 4d902b71f2a398cfa9bbdc10b6e9a78d 201 Gene3D G3DSA:3.90.950.10 3 198 1.9E-51 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Rmag_0867 605ab92260afba357a248bbcb17d4852 132 SUPERFAMILY SSF75169 4 132 3.09E-33 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0867 605ab92260afba357a248bbcb17d4852 132 Gene3D G3DSA:3.40.1260.10 1 132 4.3E-38 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0867 605ab92260afba357a248bbcb17d4852 132 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 96 2.4E-30 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF Rmag_0867 605ab92260afba357a248bbcb17d4852 132 Pfam PF02635 DsrE/DsrF-like family 4 132 4.0E-24 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 SMART SM00437 236 486 2.3E-82 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 SUPERFAMILY SSF56712 3 593 2.88E-166 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 351 367 5.6E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 5.6E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 451 465 5.6E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 161 179 5.6E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 278 287 5.6E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 476 1.1E-172 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Gene3D G3DSA:3.40.50.140 1 133 2.1E-54 T 11-10-2018 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Pfam PF13368 Topoisomerase C-terminal repeat 652 695 5.8E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Pfam PF13368 Topoisomerase C-terminal repeat 587 646 2.3E-11 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Pfam PF13368 Topoisomerase C-terminal repeat 708 764 1.1E-6 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Pfam PF01751 Toprim domain 5 112 2.9E-28 T 11-10-2018 IPR006171 TOPRIM domain Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Pfam PF01131 DNA topoisomerase 128 488 2.1E-99 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Pfam PF01131 DNA topoisomerase 505 556 6.6E-7 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 SMART SM00493 3 103 2.3E-30 T 11-10-2018 IPR006171 TOPRIM domain Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 668 50.263 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Rmag_1034 73b3e58fc07aeabd2f6e14b4a123c50a 777 SMART SM00436 103 190 1.6E-34 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Rmag_0588 af456ebe659d0b2ee220ab6beb730c8f 92 SUPERFAMILY SSF46626 20 86 3.08E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 SUPERFAMILY SSF50249 4 146 1.35E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 Gene3D G3DSA:2.40.50.140 7 145 6.5E-39 T 11-10-2018 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 6.1E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 6.1E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 6.1E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 6.1E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 6.1E-36 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 493 2.6E-211 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 491 1.3E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 SUPERFAMILY SSF55681 153 492 9.76E-121 T 11-10-2018 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 Pfam PF01336 OB-fold nucleic acid binding domain 59 137 3.3E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 Gene3D G3DSA:3.30.930.10 146 491 5.8E-133 T 11-10-2018 Rmag_0594 89dddb5d932058a8135dafb7018a7f1e 497 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 494 43.785 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Rmag_0202 2fc9ff992c36ddfdad0daa230c5a0d7a 97 SUPERFAMILY SSF46626 19 83 8.48E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0202 2fc9ff992c36ddfdad0daa230c5a0d7a 97 Gene3D G3DSA:1.10.760.10 19 97 6.4E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0202 2fc9ff992c36ddfdad0daa230c5a0d7a 97 Pfam PF00034 Cytochrome c 22 64 2.9E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0900 d23371fc5ce64c6f80b9af27e0b599aa 163 Pfam PF08282 haloacid dehalogenase-like hydrolase 88 142 1.8E-6 T 11-10-2018 Rmag_0900 d23371fc5ce64c6f80b9af27e0b599aa 163 SUPERFAMILY SSF56784 3 144 8.53E-19 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0900 d23371fc5ce64c6f80b9af27e0b599aa 163 Gene3D G3DSA:3.40.50.1000 2 153 1.8E-24 T 11-10-2018 IPR023214 HAD superfamily Rmag_0112 fca4e50ab84234a12a51da278429650f 339 SUPERFAMILY SSF52418 75 336 1.83E-87 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 5.5E-19 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 Pfam PF00591 Glycosyl transferase family, a/b domain 75 322 8.0E-91 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 335 36.435 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 Gene3D G3DSA:1.20.970.10 1 70 1.4E-26 T 11-10-2018 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 SUPERFAMILY SSF47648 1 67 1.44E-18 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 Gene3D G3DSA:3.40.1030.10 71 338 4.3E-94 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Rmag_0112 fca4e50ab84234a12a51da278429650f 339 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 334 1.1E-120 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 Pfam PF00543 Nitrogen regulatory protein P-II 4 108 8.6E-37 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 SUPERFAMILY SSF54913 1 115 3.81E-40 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 PRINTS PR00340 P-II protein signature 2 17 1.6E-26 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 PRINTS PR00340 P-II protein signature 23 41 1.6E-26 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 PRINTS PR00340 P-II protein signature 86 106 1.6E-26 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 SMART SM00938 4 108 2.5E-57 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 Gene3D G3DSA:3.30.70.120 1 115 8.6E-41 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Rmag_0281 4d766ae79e1750a00dfcd26ece928f3a 115 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Rmag_0225 fb3d252296eec9ad93f7968499995bda 74 Pfam PF01206 Sulfurtransferase TusA 4 73 1.3E-22 T 11-10-2018 IPR001455 TusA-like domain Rmag_0225 fb3d252296eec9ad93f7968499995bda 74 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 11-10-2018 IPR001455 TusA-like domain Rmag_0225 fb3d252296eec9ad93f7968499995bda 74 SUPERFAMILY SSF64307 3 73 5.36E-23 T 11-10-2018 IPR036868 TusA-like domain superfamily Rmag_0225 fb3d252296eec9ad93f7968499995bda 74 Gene3D G3DSA:3.30.110.40 1 74 3.3E-28 T 11-10-2018 IPR036868 TusA-like domain superfamily Rmag_0142 97757b59e2918a8cbc504bd13c490c21 304 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 1 304 3.9E-111 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Rmag_0142 97757b59e2918a8cbc504bd13c490c21 304 Pfam PF03116 NQR2, RnfD, RnfE family 1 303 5.8E-92 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Rmag_0142 97757b59e2918a8cbc504bd13c490c21 304 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 304 22.663 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Rmag_0886 4bf3e1f0af2054ae03e7339be62e923b 632 SUPERFAMILY SSF51735 284 575 6.18E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0886 4bf3e1f0af2054ae03e7339be62e923b 632 SUPERFAMILY SSF53335 110 331 1.05E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0886 4bf3e1f0af2054ae03e7339be62e923b 632 Gene3D G3DSA:3.40.50.720 281 604 2.2E-114 T 11-10-2018 Rmag_0886 4bf3e1f0af2054ae03e7339be62e923b 632 Gene3D G3DSA:3.40.50.720 143 267 3.3E-34 T 11-10-2018 Rmag_0886 4bf3e1f0af2054ae03e7339be62e923b 632 Pfam PF02719 Polysaccharide biosynthesis protein 286 572 8.8E-123 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Rmag_0886 4bf3e1f0af2054ae03e7339be62e923b 632 Pfam PF13727 CoA-binding domain 79 241 4.2E-11 T 11-10-2018 Rmag_0635 e0a4f3481d8de76ef72cd47490a4b969 248 Pfam PF00899 ThiF family 9 241 3.0E-57 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Rmag_0635 e0a4f3481d8de76ef72cd47490a4b969 248 Gene3D G3DSA:3.40.50.720 1 248 1.4E-86 T 11-10-2018 Rmag_0635 e0a4f3481d8de76ef72cd47490a4b969 248 SUPERFAMILY SSF69572 2 244 6.02E-83 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Rmag_0879 cdd6699d1d5d795bd07ae9f11c50c0e0 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 8.4E-21 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis Rmag_0879 cdd6699d1d5d795bd07ae9f11c50c0e0 66 SUPERFAMILY SSF54285 1 66 3.6E-16 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Rmag_0879 cdd6699d1d5d795bd07ae9f11c50c0e0 66 Pfam PF02597 ThiS family 8 66 4.7E-12 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Rmag_0879 cdd6699d1d5d795bd07ae9f11c50c0e0 66 Gene3D G3DSA:3.10.20.30 1 66 5.6E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0751 11d7355c429f34b6935aa4d282f71c8e 283 Gene3D G3DSA:2.70.70.10 128 282 2.0E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif Rmag_0751 11d7355c429f34b6935aa4d282f71c8e 283 Gene3D G3DSA:2.60.40.1590 28 127 5.7E-24 T 11-10-2018 Rmag_0751 11d7355c429f34b6935aa4d282f71c8e 283 SUPERFAMILY SSF51261 62 280 5.23E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif Rmag_0751 11d7355c429f34b6935aa4d282f71c8e 283 Pfam PF01551 Peptidase family M23 182 276 1.2E-28 T 11-10-2018 IPR016047 Peptidase M23 Rmag_0148 e460b148df1f73053cf84564696a3c44 293 Pfam PF00152 tRNA synthetases class II (D, K and N) 7 291 9.1E-29 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Rmag_0148 e460b148df1f73053cf84564696a3c44 293 Gene3D G3DSA:3.30.930.10 2 293 1.5E-71 T 11-10-2018 Rmag_0148 e460b148df1f73053cf84564696a3c44 293 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 8 290 1.2E-91 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Rmag_0148 e460b148df1f73053cf84564696a3c44 293 SUPERFAMILY SSF55681 7 290 7.79E-49 T 11-10-2018 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 SUPERFAMILY SSF81891 121 308 4.97E-34 T 11-10-2018 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 PIRSF PIRSF000813 1 235 4.5E-109 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 PIRSF PIRSF000813 226 318 6.7E-9 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 Gene3D G3DSA:3.30.460.10 1 123 3.1E-24 T 11-10-2018 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 Gene3D G3DSA:1.10.3090.10 124 358 8.5E-32 T 11-10-2018 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 1.3E-9 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 SUPERFAMILY SSF81301 1 119 1.63E-25 T 11-10-2018 Rmag_0197 bd19a69c41e33f7f6025c79c6e8ecb71 362 Pfam PF01743 Poly A polymerase head domain 3 123 4.8E-16 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Rmag_0619 06960e2da8ec9d531bf564793fd4e7f1 193 Pfam PF05494 MlaC protein 48 192 1.2E-14 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Rmag_0619 06960e2da8ec9d531bf564793fd4e7f1 193 Gene3D G3DSA:3.10.450.710 24 189 7.8E-15 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 122 4.4E-25 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 424 443 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 111 131 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 2.0E-62 T 11-10-2018 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 269 291 5.4E-9 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 85 105 5.4E-9 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 423 445 5.4E-9 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 38 57 5.4E-9 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 Pfam PF00361 Proton-conducting membrane transporter 134 417 2.1E-85 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0248 8389e167f1312e53cc44b7a41e7b471c 653 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 643 1.7E-238 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0687 abd4faa1ed82cdf925562ac0a5e5720e 488 Gene3D G3DSA:1.20.1250.20 8 195 5.6E-39 T 11-10-2018 Rmag_0687 abd4faa1ed82cdf925562ac0a5e5720e 488 SUPERFAMILY SSF103473 8 472 1.26E-53 T 11-10-2018 IPR036259 MFS transporter superfamily Rmag_0687 abd4faa1ed82cdf925562ac0a5e5720e 488 Pfam PF07690 Major Facilitator Superfamily 21 435 2.2E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Rmag_0687 abd4faa1ed82cdf925562ac0a5e5720e 488 Gene3D G3DSA:1.20.1250.20 287 475 2.2E-36 T 11-10-2018 Rmag_0919 bc2fafa3eafd1b578e529cff45405aa5 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.8E-36 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0919 bc2fafa3eafd1b578e529cff45405aa5 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.2E-37 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0919 bc2fafa3eafd1b578e529cff45405aa5 103 SUPERFAMILY SSF141091 1 101 7.46E-36 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0919 bc2fafa3eafd1b578e529cff45405aa5 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 25.458 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0919 bc2fafa3eafd1b578e529cff45405aa5 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 Gene3D G3DSA:3.20.70.20 78 740 2.8E-155 T 11-10-2018 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 SUPERFAMILY SSF51998 222 737 6.41E-163 T 11-10-2018 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 218 9.0E-12 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 Pfam PF03477 ATP cone domain 5 92 3.0E-14 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 733 1.6E-174 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 7.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 7.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 7.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 7.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 7.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 7.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.4E-123 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0523 5a28b6ae897ad86c57d3bfb11ae785b7 757 SUPERFAMILY SSF48168 10 221 6.02E-70 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0651 9fef56095bd5a282e2b7ff5a42261a6e 328 SUPERFAMILY SSF51905 2 326 4.53E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0651 9fef56095bd5a282e2b7ff5a42261a6e 328 SUPERFAMILY SSF54373 198 283 7.46E-19 T 11-10-2018 Rmag_0651 9fef56095bd5a282e2b7ff5a42261a6e 328 Pfam PF01266 FAD dependent oxidoreductase 3 321 1.5E-52 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Rmag_0651 9fef56095bd5a282e2b7ff5a42261a6e 328 Gene3D G3DSA:3.50.50.60 5 325 1.8E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0651 9fef56095bd5a282e2b7ff5a42261a6e 328 Gene3D G3DSA:3.30.9.10 89 284 1.8E-65 T 11-10-2018 Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 191 5.8E-58 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 Gene3D G3DSA:2.40.30.20 1 85 5.2E-24 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 Gene3D G3DSA:2.40.30.20 98 192 6.4E-32 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 SUPERFAMILY SSF63380 1 85 4.0E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 PIRSF PIRSF000498 1 192 3.9E-66 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 SUPERFAMILY SSF63380 90 191 6.8E-31 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 Pfam PF00677 Lumazine binding domain 96 180 4.8E-23 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0504 085f3020b3d352fc10ac07dbc54580d6 192 Pfam PF00677 Lumazine binding domain 3 83 1.6E-16 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 214 249 2.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 170 7.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 134 4.5E-7 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Gene3D G3DSA:2.160.10.10 97 300 7.9E-55 T 11-10-2018 Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Gene3D G3DSA:3.40.1390.10 1 95 5.7E-27 T 11-10-2018 Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 SUPERFAMILY SSF51161 32 306 4.26E-68 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 20 87 8.5E-18 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 318 1.1E-94 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 252 277 0.024 T 11-10-2018 IPR001451 Hexapeptide repeat Rmag_0554 75e713e4dafc6bad0197d6c2d622977c 332 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 318 29.619 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Rmag_0191 2a923ed8392d6c0b5a8f35aeccd5afc3 132 Gene3D G3DSA:3.90.1030.10 1 117 1.7E-45 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0191 2a923ed8392d6c0b5a8f35aeccd5afc3 132 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.8E-45 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0191 2a923ed8392d6c0b5a8f35aeccd5afc3 132 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.337 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0191 2a923ed8392d6c0b5a8f35aeccd5afc3 132 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0191 2a923ed8392d6c0b5a8f35aeccd5afc3 132 Pfam PF01196 Ribosomal protein L17 20 116 2.1E-32 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0191 2a923ed8392d6c0b5a8f35aeccd5afc3 132 SUPERFAMILY SSF64263 1 118 1.27E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 TIGRFAM TIGR00510 lipA: lipoyl synthase 27 312 6.1E-129 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 PIRSF PIRSF005963 3 315 3.1E-132 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 Pfam PF04055 Radical SAM superfamily 84 245 4.9E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 Gene3D G3DSA:3.20.20.70 70 287 2.9E-19 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 135.981 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 SUPERFAMILY SSF102114 46 314 9.42E-62 T 11-10-2018 Rmag_0543 6892cbecbed7e0732be3527260c676f6 315 SMART SM00729 78 287 4.7E-12 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 Hamap MF_00219 Dihydroorotase [pyrC]. 1 342 44.146 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 PIRSF PIRSF001237 1 343 1.2E-138 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 341 4.7E-133 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 Gene3D G3DSA:3.20.20.140 2 342 2.1E-105 T 11-10-2018 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 SUPERFAMILY SSF51556 3 341 1.32E-137 T 11-10-2018 IPR032466 Metal-dependent hydrolase Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 Pfam PF01979 Amidohydrolase family 10 312 3.4E-14 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 10 18 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0015 cd2463cc72d0ebdf0ab5af70b668d4a5 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Rmag_0711 426489336650fcda8752446f2a3aadeb 455 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 41 453 6.2E-100 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Rmag_0711 426489336650fcda8752446f2a3aadeb 455 PIRSF PIRSF028099 14 455 1.2E-130 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Rmag_0711 426489336650fcda8752446f2a3aadeb 455 SUPERFAMILY SSF46626 333 454 4.24E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0866 1bdade16bb885a8e93c8c286b75ad9e8 98 Gene3D G3DSA:3.40.1260.10 1 98 4.2E-31 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0866 1bdade16bb885a8e93c8c286b75ad9e8 98 Pfam PF04077 DsrH like protein 7 93 1.1E-25 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Rmag_0866 1bdade16bb885a8e93c8c286b75ad9e8 98 SUPERFAMILY SSF75169 1 97 4.71E-26 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0866 1bdade16bb885a8e93c8c286b75ad9e8 98 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 97 6.6E-28 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 4.5E-67 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 37.772 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PIRSF PIRSF002133 1 124 2.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 SUPERFAMILY SSF50249 3 123 3.77E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 Gene3D G3DSA:2.40.50.140 1 124 3.8E-60 T 11-10-2018 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.9E-40 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.0E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.0E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.0E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.0E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.0E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0160 239846b7321f582e6299200d39b5ed1f 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.0E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 167 32.652 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 Gene3D G3DSA:3.30.160.20 5 76 2.3E-28 T 11-10-2018 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 32 64 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 SUPERFAMILY SSF54211 83 163 3.29E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 SUPERFAMILY SSF54768 13 80 4.19E-22 T 11-10-2018 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 161 9.3E-28 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 78 8.2E-27 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 166 2.2E-60 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Rmag_0182 9eb8c8f65fc63843afd6011b06635a40 172 Gene3D G3DSA:3.30.230.10 78 171 1.2E-32 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Rmag_0536 0213a10d533d49443affdb4414975f91 298 SUPERFAMILY SSF54534 178 258 4.78E-16 T 11-10-2018 Rmag_0536 0213a10d533d49443affdb4414975f91 298 SUPERFAMILY SSF109998 20 170 7.65E-12 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Rmag_0536 0213a10d533d49443affdb4414975f91 298 Gene3D G3DSA:3.10.50.40 151 256 6.9E-27 T 11-10-2018 Rmag_0536 0213a10d533d49443affdb4414975f91 298 Pfam PF13616 PPIC-type PPIASE domain 147 256 1.1E-12 T 11-10-2018 Rmag_0536 0213a10d533d49443affdb4414975f91 298 Gene3D G3DSA:1.10.4030.30 21 270 6.9E-27 T 11-10-2018 Rmag_0210 ea3c3cb7e96cbeee23129db86c713eeb 241 Gene3D G3DSA:3.40.30.10 85 239 1.3E-41 T 11-10-2018 Rmag_0210 ea3c3cb7e96cbeee23129db86c713eeb 241 SUPERFAMILY SSF52833 98 236 1.66E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0210 ea3c3cb7e96cbeee23129db86c713eeb 241 Pfam PF13098 Thioredoxin-like domain 111 234 6.3E-27 T 11-10-2018 IPR012336 Thioredoxin-like fold Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 PRINTS PR01100 Shikimate kinase family signature 60 68 1.6E-22 T 11-10-2018 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 PRINTS PR01100 Shikimate kinase family signature 99 116 1.6E-22 T 11-10-2018 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 PRINTS PR01100 Shikimate kinase family signature 78 87 1.6E-22 T 11-10-2018 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 PRINTS PR01100 Shikimate kinase family signature 32 45 1.6E-22 T 11-10-2018 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 PRINTS PR01100 Shikimate kinase family signature 8 23 1.6E-22 T 11-10-2018 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 Pfam PF01202 Shikimate kinase 14 169 7.0E-47 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 ProSitePatterns PS01128 Shikimate kinase signature. 61 86 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 SUPERFAMILY SSF52540 7 171 2.68E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 Gene3D G3DSA:3.40.50.300 2 173 1.2E-50 T 11-10-2018 Rmag_0583 914e63ed2f987af0385342f2caa8d75e 173 Hamap MF_00109 Shikimate kinase [aroK]. 5 172 27.454 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Rmag_0636 4fce9e47ce3a662843eb606bba4f2aa7 163 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 154 34.449 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Rmag_0636 4fce9e47ce3a662843eb606bba4f2aa7 163 SUPERFAMILY SSF55068 1 160 2.49E-67 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Rmag_0636 4fce9e47ce3a662843eb606bba4f2aa7 163 Pfam PF01625 Peptide methionine sulfoxide reductase 5 150 3.6E-59 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Rmag_0636 4fce9e47ce3a662843eb606bba4f2aa7 163 Gene3D G3DSA:3.30.1060.10 1 157 4.1E-66 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Rmag_0636 4fce9e47ce3a662843eb606bba4f2aa7 163 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 146 1.7E-54 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Rmag_0813 a2fcc777cea1ca2e47fe2aea2d5da9c0 170 Gene3D G3DSA:3.30.70.1730 6 134 9.2E-28 T 11-10-2018 Rmag_0813 a2fcc777cea1ca2e47fe2aea2d5da9c0 170 Pfam PF00466 Ribosomal protein L10 7 99 2.9E-20 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Rmag_0813 a2fcc777cea1ca2e47fe2aea2d5da9c0 170 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 22.056 T 11-10-2018 IPR022973 Ribosomal protein L10 Rmag_0813 a2fcc777cea1ca2e47fe2aea2d5da9c0 170 SUPERFAMILY SSF160369 7 169 7.59E-41 T 11-10-2018 Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 Gene3D G3DSA:3.30.70.980 86 235 1.1E-49 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 Gene3D G3DSA:3.30.70.980 130 204 1.1E-49 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 SUPERFAMILY SSF75625 3 244 1.57E-85 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 32.506 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 7.8E-88 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 Gene3D G3DSA:1.10.10.200 1 81 8.8E-28 T 11-10-2018 IPR017856 Integrase-like, N-terminal Rmag_0394 7c42ff965c1b778fef083a7c4075770a 246 Pfam PF01709 Transcriptional regulator 5 236 1.1E-81 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0910 bedcc732a4ebc69fbc10a6b450746dc5 247 Pfam PF01975 Survival protein SurE 3 183 1.3E-56 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Rmag_0910 bedcc732a4ebc69fbc10a6b450746dc5 247 SUPERFAMILY SSF64167 1 245 1.01E-75 T 11-10-2018 Rmag_0910 bedcc732a4ebc69fbc10a6b450746dc5 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 231 9.7E-62 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Rmag_0910 bedcc732a4ebc69fbc10a6b450746dc5 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 246 34.076 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Rmag_0910 bedcc732a4ebc69fbc10a6b450746dc5 247 Gene3D G3DSA:3.40.1210.10 1 247 1.6E-85 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Rmag_0037 4038fbba79b83d0646ac3ac62b5f1426 294 Gene3D G3DSA:1.20.120.80 70 294 1.2E-64 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0037 4038fbba79b83d0646ac3ac62b5f1426 294 SUPERFAMILY SSF81452 3 294 3.92E-78 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0037 4038fbba79b83d0646ac3ac62b5f1426 294 Pfam PF00510 Cytochrome c oxidase subunit III 154 293 3.7E-44 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0037 4038fbba79b83d0646ac3ac62b5f1426 294 Pfam PF00510 Cytochrome c oxidase subunit III 6 108 2.2E-12 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0037 4038fbba79b83d0646ac3ac62b5f1426 294 Gene3D G3DSA:1.10.287.70 1 69 6.7E-17 T 11-10-2018 Rmag_0898 c12eefa0f9a4f66c291d7bce2af643dc 115 Pfam PF01050 Mannose-6-phosphate isomerase 6 68 1.3E-6 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Rmag_0898 c12eefa0f9a4f66c291d7bce2af643dc 115 SUPERFAMILY SSF51182 8 114 8.91E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Rmag_0898 c12eefa0f9a4f66c291d7bce2af643dc 115 Gene3D G3DSA:2.60.120.10 3 107 1.4E-9 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Rmag_0076 21c1de65abfc700db2242f5b11af2a72 159 Pfam PF05751 FixH 8 153 7.2E-22 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 Gene3D G3DSA:3.40.50.970 360 575 2.2E-65 T 11-10-2018 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.7E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 329 2.2E-41 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 Gene3D G3DSA:3.40.50.970 1 177 1.8E-69 T 11-10-2018 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 SUPERFAMILY SSF52467 189 356 2.05E-63 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 SUPERFAMILY SSF52518 368 563 1.46E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 Gene3D G3DSA:3.40.50.1220 189 356 4.9E-58 T 11-10-2018 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 539 7.5E-50 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 561 2.1E-252 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Rmag_0445 d06bab1b1c57aaf43304ad5967d572a3 579 SUPERFAMILY SSF52518 2 177 8.39E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 Gene3D G3DSA:3.20.20.110 138 440 5.1E-126 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 187 195 - T 11-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 144 441 1.2E-111 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 SUPERFAMILY SSF51649 139 456 1.44E-109 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 14 132 4.9E-33 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 SUPERFAMILY SSF54966 2 138 1.57E-40 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0701 397bf4f39f3ea9499286566b94ab56de 460 Gene3D G3DSA:3.30.70.150 5 137 6.9E-46 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Rmag_0835 629b1f73f9f99770e0d14f58973a5155 379 Gene3D G3DSA:3.40.640.10 53 281 8.5E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0835 629b1f73f9f99770e0d14f58973a5155 379 Gene3D G3DSA:3.90.1150.10 37 371 8.5E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0835 629b1f73f9f99770e0d14f58973a5155 379 Pfam PF00155 Aminotransferase class I and II 36 373 1.3E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Rmag_0835 629b1f73f9f99770e0d14f58973a5155 379 SUPERFAMILY SSF53383 3 378 4.35E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0344 aeb4da32a034d7f3bb3089670a1c79ab 480 ProSitePatterns PS00571 Amidases signature. 147 178 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Rmag_0344 aeb4da32a034d7f3bb3089670a1c79ab 480 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 470 3.6E-182 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Rmag_0344 aeb4da32a034d7f3bb3089670a1c79ab 480 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 471 90.666 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Rmag_0344 aeb4da32a034d7f3bb3089670a1c79ab 480 SUPERFAMILY SSF75304 2 477 3.01E-158 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Rmag_0344 aeb4da32a034d7f3bb3089670a1c79ab 480 Gene3D G3DSA:3.90.1300.10 1 480 4.4E-194 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Rmag_0344 aeb4da32a034d7f3bb3089670a1c79ab 480 Pfam PF01425 Amidase 22 460 7.0E-150 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Rmag_0754 c51222ace3dc1c8269e680d5e9310ee9 117 Pfam PF04977 Septum formation initiator 52 115 7.0E-7 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Rmag_0868 f96d2d66443a023ecb83d023bc24e929 133 SUPERFAMILY SSF75169 1 131 1.1E-34 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0868 f96d2d66443a023ecb83d023bc24e929 133 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 131 1.3E-45 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Rmag_0868 f96d2d66443a023ecb83d023bc24e929 133 Gene3D G3DSA:3.40.1260.10 1 133 9.2E-49 T 11-10-2018 IPR027396 DsrEFH-like Rmag_0868 f96d2d66443a023ecb83d023bc24e929 133 Pfam PF02635 DsrE/DsrF-like family 1 131 3.2E-23 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Rmag_1043 e358314f2a2d27de86a2290c39c9ae22 177 Pfam PF08282 haloacid dehalogenase-like hydrolase 86 150 5.7E-10 T 11-10-2018 Rmag_1043 e358314f2a2d27de86a2290c39c9ae22 177 Gene3D G3DSA:3.40.50.1000 1 175 1.2E-57 T 11-10-2018 IPR023214 HAD superfamily Rmag_1043 e358314f2a2d27de86a2290c39c9ae22 177 PIRSF PIRSF006118 1 176 2.6E-69 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Rmag_1043 e358314f2a2d27de86a2290c39c9ae22 177 SUPERFAMILY SSF56784 11 173 3.44E-43 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_1043 e358314f2a2d27de86a2290c39c9ae22 177 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 166 5.4E-56 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Rmag_0244 e80da4562ec50eac7dd045388f70615a 357 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 228 241 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0244 e80da4562ec50eac7dd045388f70615a 357 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 352 24.733 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0244 e80da4562ec50eac7dd045388f70615a 357 Pfam PF00146 NADH dehydrogenase 31 345 1.4E-125 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.0E-70 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 SUPERFAMILY SSF55120 1 246 9.35E-82 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 Gene3D G3DSA:3.30.70.660 106 242 1.1E-44 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 244 33.584 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 Gene3D G3DSA:3.30.70.580 1 105 7.2E-37 T 11-10-2018 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 Pfam PF01416 tRNA pseudouridine synthase 143 244 1.0E-27 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 Pfam PF01416 tRNA pseudouridine synthase 8 103 4.4E-8 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0984 a39612a298085bae3fa1aefbb897b4a8 247 PIRSF PIRSF001430 1 247 6.2E-76 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Rmag_0786 443bd007d41a90af32b72fc046fdac4a 153 SUPERFAMILY SSF75217 2 149 5.1E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Rmag_0786 443bd007d41a90af32b72fc046fdac4a 153 Gene3D G3DSA:3.40.1280.10 1 153 2.8E-59 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Rmag_0786 443bd007d41a90af32b72fc046fdac4a 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 148 31.963 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Rmag_0786 443bd007d41a90af32b72fc046fdac4a 153 Pfam PF00588 SpoU rRNA Methylase family 2 139 3.7E-32 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Rmag_0786 443bd007d41a90af32b72fc046fdac4a 153 PIRSF PIRSF029256 1 151 4.4E-60 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Rmag_0932 b4917ac980f99f141ed7a7d56f2d7003 139 SMART SM00450 41 136 4.8E-20 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_0932 b4917ac980f99f141ed7a7d56f2d7003 139 Pfam PF00581 Rhodanese-like domain 47 133 2.6E-15 T 11-10-2018 IPR001763 Rhodanese-like domain Rmag_0932 b4917ac980f99f141ed7a7d56f2d7003 139 Gene3D G3DSA:3.40.250.10 24 138 2.8E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_0932 b4917ac980f99f141ed7a7d56f2d7003 139 SUPERFAMILY SSF52821 20 137 3.67E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 SMART SM01390 3 97 1.1E-45 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.8E-30 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 8.5E-78 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 Pfam PF01479 S4 domain 99 145 2.4E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 Gene3D G3DSA:1.10.1050.10 6 208 3.3E-78 T 11-10-2018 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 SUPERFAMILY SSF55174 3 208 5.36E-65 T 11-10-2018 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 SMART SM00363 98 162 7.3E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 Gene3D G3DSA:3.10.290.10 97 193 3.3E-78 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Rmag_0189 2b0a6bb8836520138a0bff827dfff326 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.738 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Rmag_0776 e3d8f45c55c42ac4b4b7bd26fbc33157 111 SUPERFAMILY SSF110857 6 109 7.32E-10 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Rmag_0776 e3d8f45c55c42ac4b4b7bd26fbc33157 111 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 7 109 2.1E-7 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Rmag_0776 e3d8f45c55c42ac4b4b7bd26fbc33157 111 Gene3D G3DSA:3.10.490.10 2 111 1.5E-13 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 1.8E-43 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 1.8E-43 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 1.8E-43 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 1.8E-43 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 1.8E-43 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 1.8E-43 T 11-10-2018 Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 217 1.3E-65 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 PIRSF PIRSF002764 1 221 3.5E-81 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Rmag_0737 4a3a99d27ac367cc3ea436224e5438fe 221 Pfam PF03379 CcmB protein 6 218 1.6E-64 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 332 1.5E-65 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 SUPERFAMILY SSF52540 1 199 2.07E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 Gene3D G3DSA:3.40.50.300 1 138 6.8E-44 T 11-10-2018 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 Gene3D G3DSA:1.10.8.60 143 212 6.2E-16 T 11-10-2018 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 Gene3D G3DSA:1.20.272.10 214 338 3.2E-23 T 11-10-2018 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 335 2.0E-9 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 Pfam PF06144 DNA polymerase III, delta subunit 20 188 7.0E-32 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Rmag_0134 ae3fb397125d6811aca9e5facf43b992 339 SUPERFAMILY SSF48019 211 334 5.27E-16 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Rmag_0788 c7dba8336c04eafc2358579908b3e1f5 217 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 3.9E-63 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Rmag_0788 c7dba8336c04eafc2358579908b3e1f5 217 PIRSF PIRSF006102 1 217 8.9E-77 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Rmag_0788 c7dba8336c04eafc2358579908b3e1f5 217 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 2.0E-80 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Rmag_0788 c7dba8336c04eafc2358579908b3e1f5 217 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 211 26.804 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Rmag_0516 24370b8551a76d59df9fd12805884c51 190 SUPERFAMILY SSF103088 71 188 3.79E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily Rmag_0516 24370b8551a76d59df9fd12805884c51 190 Pfam PF00691 OmpA family 89 182 2.3E-14 T 11-10-2018 IPR006665 OmpA-like domain Rmag_0516 24370b8551a76d59df9fd12805884c51 190 Gene3D G3DSA:3.30.1330.60 75 190 4.0E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily Rmag_0516 24370b8551a76d59df9fd12805884c51 190 PRINTS PR01021 OMPA domain signature 135 151 3.5E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Rmag_0516 24370b8551a76d59df9fd12805884c51 190 PRINTS PR01021 OMPA domain signature 120 135 3.5E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Rmag_0516 24370b8551a76d59df9fd12805884c51 190 PRINTS PR01021 OMPA domain signature 90 112 3.5E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Rmag_0028 35a4d1e08ddf5a35d0da4475f339e31d 255 SUPERFAMILY SSF51366 3 254 3.14E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_0028 35a4d1e08ddf5a35d0da4475f339e31d 255 Pfam PF00977 Histidine biosynthesis protein 6 238 1.5E-84 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Rmag_0028 35a4d1e08ddf5a35d0da4475f339e31d 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 254 45.382 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Rmag_0028 35a4d1e08ddf5a35d0da4475f339e31d 255 Gene3D G3DSA:3.20.20.70 1 255 4.6E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0028 35a4d1e08ddf5a35d0da4475f339e31d 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 254 2.9E-107 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Rmag_0774 39f0eab3cb3917439e695142076cb8f9 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 8.2E-48 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 Rmag_0774 39f0eab3cb3917439e695142076cb8f9 140 PIRSF PIRSF004638 1 140 1.2E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 Rmag_1066 5cca5e46ea4229746411f916e9042194 534 Gene3D G3DSA:1.10.510.10 257 394 3.3E-6 T 11-10-2018 Rmag_1066 5cca5e46ea4229746411f916e9042194 534 SUPERFAMILY SSF56112 92 428 2.13E-39 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Rmag_1066 5cca5e46ea4229746411f916e9042194 534 Pfam PF03109 ABC1 family 110 227 2.7E-34 T 11-10-2018 IPR004147 UbiB domain Rmag_1066 5cca5e46ea4229746411f916e9042194 534 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 436 6.6E-166 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Rmag_1022 864316a1fd21e66874d9619d6dddc940 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 49 73 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Rmag_1022 864316a1fd21e66874d9619d6dddc940 313 Gene3D G3DSA:3.40.1190.20 4 312 1.5E-93 T 11-10-2018 IPR029056 Ribokinase-like Rmag_1022 864316a1fd21e66874d9619d6dddc940 313 SUPERFAMILY SSF53613 16 306 2.81E-55 T 11-10-2018 IPR029056 Ribokinase-like Rmag_1022 864316a1fd21e66874d9619d6dddc940 313 Pfam PF00294 pfkB family carbohydrate kinase 36 292 1.2E-31 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Rmag_1053 a3a9813ecc99864b3bf290c774454932 431 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 303 7.6E-17 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Rmag_1053 a3a9813ecc99864b3bf290c774454932 431 Gene3D G3DSA:3.50.50.100 1 419 6.4E-137 T 11-10-2018 Rmag_1053 a3a9813ecc99864b3bf290c774454932 431 SUPERFAMILY SSF51905 3 344 3.34E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_1053 a3a9813ecc99864b3bf290c774454932 431 SUPERFAMILY SSF51905 143 242 9.5E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0215 40dd15579db91cfe154a25fff05ff6af 116 SUPERFAMILY SSF54913 1 101 6.67E-18 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Rmag_0215 40dd15579db91cfe154a25fff05ff6af 116 Gene3D G3DSA:3.30.70.120 1 101 5.9E-11 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Rmag_0215 40dd15579db91cfe154a25fff05ff6af 116 SMART SM00938 6 104 7.1E-4 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Rmag_0092 7363b28fff343913cb44ce34963fab4e 666 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 6 666 4.7E-262 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Rmag_0092 7363b28fff343913cb44ce34963fab4e 666 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 666 24.937 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Rmag_0092 7363b28fff343913cb44ce34963fab4e 666 Pfam PF03030 Inorganic H+ pyrophosphatase 13 662 1.3E-264 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Rmag_0092 7363b28fff343913cb44ce34963fab4e 666 PIRSF PIRSF001265 1 666 5.3E-258 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 Pfam PF02872 5'-nucleotidase, C-terminal domain 452 577 1.0E-13 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 SUPERFAMILY SSF55816 429 614 2.75E-28 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 Gene3D G3DSA:3.60.21.10 102 407 2.7E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 SUPERFAMILY SSF56300 40 399 3.42E-69 T 11-10-2018 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 7.8E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 Gene3D G3DSA:3.90.780.10 432 626 1.2E-62 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 PRINTS PR01607 Apyrase family signature 313 336 4.3E-14 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 PRINTS PR01607 Apyrase family signature 44 62 4.3E-14 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 PRINTS PR01607 Apyrase family signature 345 365 4.3E-14 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 PRINTS PR01607 Apyrase family signature 564 583 4.3E-14 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0156 a5df8ad4cefbc1623a5b68975e05e9e6 629 PRINTS PR01607 Apyrase family signature 294 311 4.3E-14 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 Gene3D G3DSA:1.10.40.30 384 456 1.7E-194 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 Pfam PF14698 Argininosuccinate lyase C-terminal 387 454 4.1E-24 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 Gene3D G3DSA:1.10.275.10 49 253 1.7E-194 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00145 Argininosuccinate lyase family signature 217 233 4.3E-66 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00145 Argininosuccinate lyase family signature 166 186 4.3E-66 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00145 Argininosuccinate lyase family signature 125 147 4.3E-66 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00145 Argininosuccinate lyase family signature 334 353 4.3E-66 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00145 Argininosuccinate lyase family signature 299 315 4.3E-66 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00145 Argininosuccinate lyase family signature 255 279 4.3E-66 T 11-10-2018 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 ProSitePatterns PS00163 Fumarate lyases signature. 299 308 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 Hamap MF_00006 Argininosuccinate lyase [argH]. 26 477 44.079 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00149 Fumarate lyase superfamily signature 299 315 1.8E-30 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00149 Fumarate lyase superfamily signature 126 144 1.8E-30 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00149 Fumarate lyase superfamily signature 255 282 1.8E-30 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 PRINTS PR00149 Fumarate lyase superfamily signature 171 189 1.8E-30 T 11-10-2018 IPR000362 Fumarate lyase family Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 TIGRFAM TIGR00838 argH: argininosuccinate lyase 28 479 8.5E-199 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 Pfam PF00206 Lyase 30 324 1.0E-78 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 SUPERFAMILY SSF48557 28 479 1.98E-153 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Rmag_0784 16ac9dd72c02a16fae3114a876c2150b 480 Gene3D G3DSA:1.20.200.10 143 472 1.7E-194 T 11-10-2018 Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 Gene3D G3DSA:3.30.300.130 2 86 3.4E-9 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 SUPERFAMILY SSF52540 90 325 1.41E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 SUPERFAMILY SSF117916 3 81 5.89E-12 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 Pfam PF01883 Iron-sulfur cluster assembly protein 7 67 1.2E-9 T 11-10-2018 IPR002744 MIP18 family-like Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 340 3.7E-101 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 341 36.651 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 Rmag_0571 856eceedcd50a8ba0583e529180f4df1 360 Gene3D G3DSA:3.40.50.300 88 340 1.9E-80 T 11-10-2018 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 SUPERFAMILY SSF46626 37 113 2.24E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 Pfam PF00034 Cytochrome c 130 225 3.5E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 Pfam PF00034 Cytochrome c 40 113 2.2E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 PIRSF PIRSF000005 10 227 2.1E-55 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 Gene3D G3DSA:1.10.760.10 121 227 2.0E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 SUPERFAMILY SSF46626 125 225 9.01E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0203 8bd35b7b858b362626cbe2ef9f811c20 227 Gene3D G3DSA:1.10.760.10 40 116 8.3E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Rmag_0921 a163ab6c4b9a39ea0ccc4aeab5fcc238 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 237 83.099 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Rmag_0921 a163ab6c4b9a39ea0ccc4aeab5fcc238 239 SUPERFAMILY SSF56300 3 220 4.75E-22 T 11-10-2018 Rmag_0921 a163ab6c4b9a39ea0ccc4aeab5fcc238 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 228 1.6E-63 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 Gene3D G3DSA:3.30.9.50 82 269 1.8E-91 T 11-10-2018 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 Gene3D G3DSA:3.50.50.60 10 335 1.8E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 SUPERFAMILY SSF51905 8 381 4.6E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 Pfam PF01494 FAD binding domain 9 336 1.7E-24 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.0E-17 T 11-10-2018 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 5.0E-17 T 11-10-2018 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 5.0E-17 T 11-10-2018 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 5.0E-17 T 11-10-2018 Rmag_0972 ed44803a1295cf7b1288c6922089d98d 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 387 9.0E-114 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Rmag_0961 5409fcce3c3e706a43e1c034e30cd6c7 305 SMART SM00382 30 212 9.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0961 5409fcce3c3e706a43e1c034e30cd6c7 305 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_0961 5409fcce3c3e706a43e1c034e30cd6c7 305 SUPERFAMILY SSF52540 4 229 1.68E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0961 5409fcce3c3e706a43e1c034e30cd6c7 305 Gene3D G3DSA:3.40.50.300 2 242 5.9E-62 T 11-10-2018 Rmag_0961 5409fcce3c3e706a43e1c034e30cd6c7 305 Pfam PF00005 ABC transporter 21 165 2.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 Pfam PF02347 Glycine cleavage system P-protein 464 721 3.8E-12 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 Pfam PF02347 Glycine cleavage system P-protein 8 430 1.7E-167 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 Gene3D G3DSA:3.40.640.10 510 738 6.0E-60 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 Gene3D G3DSA:3.40.640.10 86 345 4.6E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 SUPERFAMILY SSF53383 8 430 3.54E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 Gene3D G3DSA:3.90.1150.10 746 883 1.8E-38 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 1 936 23.614 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 SUPERFAMILY SSF53383 467 931 6.2E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0821 9ad31e9dcbe710ff69230867b9d9bc1d 937 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 8 930 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Rmag_0428 d47aa5ef83618878c68588021cb3c099 162 Pfam PF00011 Hsp20/alpha crystallin family 67 162 2.2E-19 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Rmag_0428 d47aa5ef83618878c68588021cb3c099 162 SUPERFAMILY SSF49764 44 161 2.3E-20 T 11-10-2018 IPR008978 HSP20-like chaperone Rmag_0428 d47aa5ef83618878c68588021cb3c099 162 Gene3D G3DSA:2.60.40.790 18 162 1.4E-23 T 11-10-2018 IPR008978 HSP20-like chaperone Rmag_0981 7ff04f4d157699c6374d743c6af024a5 241 SMART SM00382 30 233 1.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0981 7ff04f4d157699c6374d743c6af024a5 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 6 239 2.4E-108 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Rmag_0981 7ff04f4d157699c6374d743c6af024a5 241 SUPERFAMILY SSF52540 5 237 7.25E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0981 7ff04f4d157699c6374d743c6af024a5 241 Pfam PF00005 ABC transporter 22 168 7.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0981 7ff04f4d157699c6374d743c6af024a5 241 Gene3D G3DSA:3.40.50.300 4 241 4.9E-67 T 11-10-2018 Rmag_0981 7ff04f4d157699c6374d743c6af024a5 241 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 PRINTS PR01249 Ribosomal protein L31 signature 23 40 5.0E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 PRINTS PR01249 Ribosomal protein L31 signature 68 86 5.0E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 PRINTS PR01249 Ribosomal protein L31 signature 53 68 5.0E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 SUPERFAMILY SSF143800 22 88 6.28E-27 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 TIGRFAM TIGR00105 L31: ribosomal protein bL31 22 88 4.5E-35 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 22 90 29.953 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 Gene3D G3DSA:2.30.170.50 22 91 6.5E-33 T 11-10-2018 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 ProSitePatterns PS01143 Ribosomal protein L31 signature. 57 78 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_1027 7f12d3e0a4928f210bbc4cb294c1b7a3 91 Pfam PF01197 Ribosomal protein L31 22 87 4.8E-33 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 12 476 5.8E-217 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 ProSitePatterns PS00450 Aconitase family signature 1. 352 368 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 299 313 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 356 367 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 132 145 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 121 129 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 208 221 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 413 426 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 95 108 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 146 161 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 PRINTS PR00415 Aconitase family signature 222 235 1.2E-49 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 Pfam PF00330 Aconitase family (aconitate hydratase) 18 471 4.0E-150 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 Gene3D G3DSA:3.30.499.10 343 477 2.3E-47 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 Gene3D G3DSA:3.30.499.20 14 299 1.3E-95 T 11-10-2018 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 ProSitePatterns PS01244 Aconitase family signature 2. 413 426 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 SUPERFAMILY SSF53732 9 474 1.44E-157 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Rmag_0372 0d1bc00f06caa6bcf002d81004f8d762 477 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 12 477 54.826 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Rmag_0404 2b9e841a64c90aecdc8c829e9c494ecc 222 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 3 221 5.3E-80 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0404 2b9e841a64c90aecdc8c829e9c494ecc 222 SMART SM00479 3 175 2.9E-39 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0404 2b9e841a64c90aecdc8c829e9c494ecc 222 Pfam PF00929 Exonuclease 5 166 1.7E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Rmag_0404 2b9e841a64c90aecdc8c829e9c494ecc 222 Gene3D G3DSA:3.30.420.10 1 182 4.3E-49 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Rmag_0404 2b9e841a64c90aecdc8c829e9c494ecc 222 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 215 2.0E-57 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0404 2b9e841a64c90aecdc8c829e9c494ecc 222 SUPERFAMILY SSF53098 3 174 6.61E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 Gene3D G3DSA:1.25.40.10 182 264 5.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 Gene3D G3DSA:1.25.40.10 111 181 1.0E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 SUPERFAMILY SSF48452 141 247 5.52E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 SMART SM00028 215 248 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 SMART SM00028 144 177 1.1E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 Pfam PF00515 Tetratricopeptide repeat 144 177 1.2E-6 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Rmag_0273 b2f32cc969bc91695ae9aa764a2628f1 383 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 5 111 2.2E-13 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 SMART SM00562 1 138 5.6E-81 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 Gene3D G3DSA:3.30.70.141 1 137 2.0E-55 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 4.5E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 4.5E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 4.5E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 4.5E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 4.5E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 33.978 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 SUPERFAMILY SSF54919 1 136 1.19E-56 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Rmag_0381 2a1532ac6c2abac208051cd74af26a06 141 Pfam PF00334 Nucleoside diphosphate kinase 2 134 9.0E-55 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 Pfam PF02913 FAD linked oxidases, C-terminal domain 213 447 4.1E-66 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 SUPERFAMILY SSF55103 214 458 6.87E-66 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 Gene3D G3DSA:3.30.465.40 14 228 1.2E-52 T 11-10-2018 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 SUPERFAMILY SSF56176 2 210 4.35E-58 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 Gene3D G3DSA:1.10.45.10 409 449 1.4E-9 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 Gene3D G3DSA:3.30.70.2740 327 408 2.8E-8 T 11-10-2018 Rmag_0313 0ac20e74d695eb27c3dd7a5236f205e1 476 Pfam PF01565 FAD binding domain 38 174 3.3E-34 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 TIGRFAM TIGR00337 PyrG: CTP synthase 18 550 2.7E-246 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 Pfam PF06418 CTP synthase N-terminus 19 281 7.0E-124 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 SUPERFAMILY SSF52317 304 553 3.32E-82 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 Pfam PF00117 Glutamine amidotransferase class-I 316 550 6.7E-56 T 11-10-2018 IPR017926 Glutamine amidotransferase Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 Gene3D G3DSA:3.40.50.300 16 300 1.5E-129 T 11-10-2018 Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 SUPERFAMILY SSF52540 18 283 1.38E-120 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 Gene3D G3DSA:3.40.50.880 301 557 2.7E-99 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Rmag_0674 eaef95297e1e53012d175e0ebe62df09 560 Hamap MF_01227 CTP synthase [pyrG]. 18 555 50.417 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Rmag_0541 52e48830ddd496630f3518100c2136ff 92 Pfam PF04359 Protein of unknown function (DUF493) 9 92 3.0E-23 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 Rmag_0541 52e48830ddd496630f3518100c2136ff 92 Gene3D G3DSA:3.30.70.260 4 92 1.2E-22 T 11-10-2018 Rmag_0541 52e48830ddd496630f3518100c2136ff 92 SUPERFAMILY SSF117991 7 92 4.58E-22 T 11-10-2018 IPR027471 YbeD-like domain superfamily Rmag_0541 52e48830ddd496630f3518100c2136ff 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 17.559 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 Rmag_0427 497368d0f44de042efddc3314f057baa 213 Pfam PF04055 Radical SAM superfamily 30 124 6.4E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Rmag_0427 497368d0f44de042efddc3314f057baa 213 SUPERFAMILY SSF102114 28 106 9.29E-16 T 11-10-2018 Rmag_0427 497368d0f44de042efddc3314f057baa 213 PIRSF PIRSF000370 4 213 1.5E-65 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Rmag_0427 497368d0f44de042efddc3314f057baa 213 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 6 213 4.8E-94 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE Rmag_0427 497368d0f44de042efddc3314f057baa 213 Gene3D G3DSA:3.20.20.70 5 207 2.1E-39 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0427 497368d0f44de042efddc3314f057baa 213 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 210 36.54 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Rmag_0427 497368d0f44de042efddc3314f057baa 213 Pfam PF13394 4Fe-4S single cluster domain 27 108 1.7E-12 T 11-10-2018 Rmag_0027 bc1cb2df3482a4953458ff9fba81d1bb 248 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Rmag_0027 bc1cb2df3482a4953458ff9fba81d1bb 248 Gene3D G3DSA:3.40.1180.10 8 241 4.2E-83 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Rmag_0027 bc1cb2df3482a4953458ff9fba81d1bb 248 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 240 4.8E-80 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Rmag_0027 bc1cb2df3482a4953458ff9fba81d1bb 248 SUPERFAMILY SSF64005 15 235 2.49E-78 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Rmag_0027 bc1cb2df3482a4953458ff9fba81d1bb 248 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 35.712 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Rmag_0027 bc1cb2df3482a4953458ff9fba81d1bb 248 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 6.0E-73 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Rmag_0395 5b42b5dff759932e55323819a74a6044 316 Gene3D G3DSA:3.40.50.10800 90 312 1.1E-92 T 11-10-2018 Rmag_0395 5b42b5dff759932e55323819a74a6044 316 Pfam PF02445 Quinolinate synthetase A protein 7 312 2.9E-99 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Rmag_0395 5b42b5dff759932e55323819a74a6044 316 SUPERFAMILY SSF142754 4 314 3.92E-103 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Rmag_0395 5b42b5dff759932e55323819a74a6044 316 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 5 315 1.0E-101 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Rmag_0395 5b42b5dff759932e55323819a74a6044 316 Gene3D G3DSA:3.40.50.10800 6 295 1.1E-92 T 11-10-2018 Rmag_0395 5b42b5dff759932e55323819a74a6044 316 Gene3D G3DSA:3.40.50.10800 175 270 1.1E-92 T 11-10-2018 Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 Pfam PF00698 Acyl transferase domain 6 214 7.1E-21 T 11-10-2018 IPR014043 Acyl transferase Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 PIRSF PIRSF000446 1 309 2.6E-102 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 Gene3D G3DSA:3.40.366.10 6 283 2.0E-83 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 SUPERFAMILY SSF52151 3 303 1.86E-63 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 Gene3D G3DSA:3.30.70.250 123 195 2.0E-83 T 11-10-2018 Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 301 4.7E-19 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 6.6E-104 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Rmag_0917 d2318577f1c76f31211ddcf7bb57589c 310 SUPERFAMILY SSF55048 128 195 1.1E-14 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Rmag_0253 0acd1448cba3b3277f3e4a549bb07d78 422 SUPERFAMILY SSF56954 2 412 1.83E-49 T 11-10-2018 Rmag_0253 0acd1448cba3b3277f3e4a549bb07d78 422 Gene3D G3DSA:1.20.1600.10 21 412 1.6E-43 T 11-10-2018 Rmag_0253 0acd1448cba3b3277f3e4a549bb07d78 422 Pfam PF02321 Outer membrane efflux protein 30 213 2.9E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Rmag_0253 0acd1448cba3b3277f3e4a549bb07d78 422 Pfam PF02321 Outer membrane efflux protein 239 407 5.1E-10 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Rmag_0915 d1a2d49eafc603220444770fc0b80fe3 156 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 41.614 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Rmag_0915 d1a2d49eafc603220444770fc0b80fe3 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Rmag_0915 d1a2d49eafc603220444770fc0b80fe3 156 Pfam PF14437 MafB19-like deaminase 8 153 1.4E-32 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Rmag_0915 d1a2d49eafc603220444770fc0b80fe3 156 Gene3D G3DSA:3.40.140.10 4 156 4.0E-57 T 11-10-2018 Rmag_0915 d1a2d49eafc603220444770fc0b80fe3 156 SUPERFAMILY SSF53927 6 153 3.35E-51 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Rmag_0305 0beba3b1fb6796ff1b679b9627e4adfe 364 Gene3D G3DSA:3.20.20.70 6 355 1.7E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0305 0beba3b1fb6796ff1b679b9627e4adfe 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 353 9.2E-153 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Rmag_0305 0beba3b1fb6796ff1b679b9627e4adfe 364 SUPERFAMILY SSF51569 11 352 6.07E-128 T 11-10-2018 Rmag_0305 0beba3b1fb6796ff1b679b9627e4adfe 364 PIRSF PIRSF001361 2 356 1.7E-155 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Rmag_0305 0beba3b1fb6796ff1b679b9627e4adfe 364 Pfam PF00793 DAHP synthetase I family 45 343 2.2E-99 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Rmag_0664 d14909993c3d38ec66a2ce45ba6ba5e2 113 Pfam PF01250 Ribosomal protein S6 3 90 4.5E-25 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0664 d14909993c3d38ec66a2ce45ba6ba5e2 113 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 3.9E-29 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0664 d14909993c3d38ec66a2ce45ba6ba5e2 113 SUPERFAMILY SSF54995 1 103 8.5E-34 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0664 d14909993c3d38ec66a2ce45ba6ba5e2 113 Gene3D G3DSA:3.30.70.60 1 91 6.7E-29 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Rmag_0664 d14909993c3d38ec66a2ce45ba6ba5e2 113 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0664 d14909993c3d38ec66a2ce45ba6ba5e2 113 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 19.832 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Rmag_0599 b3629ce2278368ea3b47b1cb56818c1c 194 Pfam PF05494 MlaC protein 26 187 3.1E-32 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Rmag_0599 b3629ce2278368ea3b47b1cb56818c1c 194 Gene3D G3DSA:3.10.450.50 26 160 6.7E-29 T 11-10-2018 Rmag_0599 b3629ce2278368ea3b47b1cb56818c1c 194 Gene3D G3DSA:1.10.10.640 59 185 6.7E-29 T 11-10-2018 Rmag_0638 ec18956d6a0ce220dde1250885c5ff56 79 Gene3D G3DSA:3.30.70.120 27 79 2.4E-11 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Rmag_0638 ec18956d6a0ce220dde1250885c5ff56 79 SUPERFAMILY SSF102705 27 78 1.53E-6 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 295 726 7.8E-173 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 SMART SM00481 7 74 7.2E-16 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 Gene3D G3DSA:3.20.20.140 1 268 5.2E-76 T 11-10-2018 Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 Pfam PF02811 PHP domain 8 170 1.6E-30 T 11-10-2018 IPR004013 PHP domain GO:0003824 Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1019 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 Pfam PF14579 Helix-hairpin-helix motif 799 888 2.0E-22 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 SUPERFAMILY SSF89550 6 261 1.55E-13 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Rmag_0803 e203e1d1ef6cd46b904d63af78795f56 1144 Gene3D G3DSA:1.10.10.1600 426 508 6.4E-28 T 11-10-2018 Rmag_0978 60f116ae84c3030a928d1b74c21fb169 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 121 2.1E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Rmag_0978 60f116ae84c3030a928d1b74c21fb169 143 Gene3D G3DSA:3.10.180.10 1 132 7.1E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rmag_0978 60f116ae84c3030a928d1b74c21fb169 143 SUPERFAMILY SSF54593 1 126 7.52E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 Gene3D G3DSA:3.40.50.720 4 249 7.4E-62 T 11-10-2018 Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 SUPERFAMILY SSF51735 12 245 1.04E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 4.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 4.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 4.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 4.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 4.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Rmag_0490 a23cf8e4ef4e135e136a351b110c0abc 250 Pfam PF00106 short chain dehydrogenase 17 209 4.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.7E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.7E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.7E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.7E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.7E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.7E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 SUPERFAMILY SSF51735 2 237 2.62E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 235 1.2E-37 T 11-10-2018 Rmag_0437 3568621e2806760a4b49566e92f4ed12 239 Gene3D G3DSA:3.40.50.720 1 238 3.8E-57 T 11-10-2018 Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 172 1.3E-60 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 154 166 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 Gene3D G3DSA:3.30.230.40 88 192 3.2E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 SUPERFAMILY SSF54211 2 84 3.16E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 Gene3D G3DSA:3.30.230.40 1 87 3.2E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 SUPERFAMILY SSF54211 86 176 5.56E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Rmag_0950 ce7cf78b05534271a4bb4d9e2b434e36 192 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 192 38.63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Rmag_0768 0420af05c3535b8181bd6be45907ad92 179 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Rmag_0768 0420af05c3535b8181bd6be45907ad92 179 Pfam PF00293 NUDIX domain 7 145 1.4E-21 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Rmag_0768 0420af05c3535b8181bd6be45907ad92 179 SUPERFAMILY SSF55811 6 158 4.74E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Rmag_0768 0420af05c3535b8181bd6be45907ad92 179 Gene3D G3DSA:3.90.79.10 1 158 1.0E-45 T 11-10-2018 Rmag_0768 0420af05c3535b8181bd6be45907ad92 179 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 34.603 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Rmag_0007 e573f1b8b7ca494ece5cfdf4c4544a2c 213 Gene3D G3DSA:3.40.50.300 1 211 2.0E-43 T 11-10-2018 Rmag_0007 e573f1b8b7ca494ece5cfdf4c4544a2c 213 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 170 2.6E-31 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Rmag_0007 e573f1b8b7ca494ece5cfdf4c4544a2c 213 PIRSF PIRSF006755 1 208 4.1E-41 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Rmag_0007 e573f1b8b7ca494ece5cfdf4c4544a2c 213 SUPERFAMILY SSF52540 1 188 2.33E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0007 e573f1b8b7ca494ece5cfdf4c4544a2c 213 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 203 22.447 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Rmag_0007 e573f1b8b7ca494ece5cfdf4c4544a2c 213 Pfam PF13500 AAA domain 3 190 2.4E-31 T 11-10-2018 Rmag_0880 841810d52d6b478dc786a6a38da2af8c 360 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 19 172 6.8E-11 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Rmag_0880 841810d52d6b478dc786a6a38da2af8c 360 Gene3D G3DSA:3.40.50.620 17 201 4.0E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Rmag_0880 841810d52d6b478dc786a6a38da2af8c 360 SUPERFAMILY SSF52402 19 259 1.92E-29 T 11-10-2018 Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 PIRSF PIRSF000139 2 136 4.6E-43 T 11-10-2018 Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 PIRSF PIRSF000139 127 374 4.8E-65 T 11-10-2018 Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 Pfam PF02754 Cysteine-rich domain 275 358 2.7E-12 T 11-10-2018 IPR004017 Cysteine-rich domain Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 Pfam PF02754 Cysteine-rich domain 149 228 3.6E-11 T 11-10-2018 IPR004017 Cysteine-rich domain Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 SUPERFAMILY SSF54862 13 111 1.67E-18 T 11-10-2018 Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 Pfam PF13183 4Fe-4S dicluster domain 16 82 3.5E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Rmag_0315 ff1d871f0c9b6d44781f55655150984c 374 Gene3D G3DSA:1.10.1060.10 2 100 9.0E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Rmag_0031 22c38f3365d5bd6d31d1fc9c0b7700fe 63 Pfam PF11174 Protein of unknown function (DUF2970) 4 62 8.9E-22 T 11-10-2018 IPR021344 Protein of unknown function DUF2970 Rmag_0839 4a19f327041a684b22ea5f7805cd91ab 124 ProSitePatterns PS00195 Glutaredoxin active site. 47 63 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Rmag_0839 4a19f327041a684b22ea5f7805cd91ab 124 Pfam PF00462 Glutaredoxin 45 100 1.5E-10 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Rmag_0839 4a19f327041a684b22ea5f7805cd91ab 124 Gene3D G3DSA:3.40.30.10 23 123 6.0E-10 T 11-10-2018 Rmag_0839 4a19f327041a684b22ea5f7805cd91ab 124 SUPERFAMILY SSF52833 44 124 1.33E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0593 1f89874b5c8202529f651d84e862b833 225 SUPERFAMILY SSF52540 8 224 2.11E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0593 1f89874b5c8202529f651d84e862b833 225 Hamap MF_00238 Cytidylate kinase [cmk]. 7 225 29.713 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Rmag_0593 1f89874b5c8202529f651d84e862b833 225 Gene3D G3DSA:3.40.50.300 3 225 1.7E-75 T 11-10-2018 Rmag_0593 1f89874b5c8202529f651d84e862b833 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 7 221 3.4E-77 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Rmag_0593 1f89874b5c8202529f651d84e862b833 225 Pfam PF02224 Cytidylate kinase 10 224 6.0E-73 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 PRINTS PR01650 Bacterial translocase SecE signature 88 108 6.7E-12 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 PRINTS PR01650 Bacterial translocase SecE signature 64 84 6.7E-12 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 PRINTS PR01650 Bacterial translocase SecE signature 43 64 6.7E-12 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 PRINTS PR01650 Bacterial translocase SecE signature 108 123 6.7E-12 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 121 4.8E-19 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 120 12.241 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 Gene3D G3DSA:1.20.5.1030 65 122 7.8E-18 T 11-10-2018 IPR038379 SecE superfamily Rmag_0817 cbad77d07d08675b70971b390eefe0e3 123 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 121 4.5E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Rmag_0236 574e08ab9a031f394961d32fd744930d 474 PIRSF PIRSF004919 10 471 8.0E-136 T 11-10-2018 IPR025502 TldD Rmag_0236 574e08ab9a031f394961d32fd744930d 474 SUPERFAMILY SSF111283 13 470 1.44E-123 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Rmag_0236 574e08ab9a031f394961d32fd744930d 474 Pfam PF01523 Putative modulator of DNA gyrase 30 322 8.3E-67 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Rmag_0236 574e08ab9a031f394961d32fd744930d 474 Gene3D G3DSA:3.30.2290.10 7 225 2.1E-12 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Rmag_0842 793e630fa888291d0dedfb3c06d1d5ea 59 SUPERFAMILY SSF158997 1 53 4.58E-16 T 11-10-2018 Rmag_0842 793e630fa888291d0dedfb3c06d1d5ea 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 53 22.857 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 Rmag_0842 793e630fa888291d0dedfb3c06d1d5ea 59 Gene3D G3DSA:2.20.25.10 9 59 4.4E-17 T 11-10-2018 Rmag_0842 793e630fa888291d0dedfb3c06d1d5ea 59 Pfam PF03966 Trm112p-like protein 3 40 3.8E-7 T 11-10-2018 IPR005651 Trm112-like Rmag_0084 afaadaa1e0697d6c1394210dcb39bd6c 161 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 21 159 4.8E-29 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Rmag_0084 afaadaa1e0697d6c1394210dcb39bd6c 161 Pfam PF03968 OstA-like protein 29 141 9.3E-18 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Rmag_0084 afaadaa1e0697d6c1394210dcb39bd6c 161 Gene3D G3DSA:2.60.450.10 21 160 7.7E-29 T 11-10-2018 Rmag_0472 85aaaf54ff7ba9507d50a67f4da39bdc 120 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 120 1.2E-19 T 11-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein Rmag_0472 85aaaf54ff7ba9507d50a67f4da39bdc 120 SUPERFAMILY SSF64076 8 120 6.67E-24 T 11-10-2018 IPR036748 MTH938-like superfamily Rmag_0472 85aaaf54ff7ba9507d50a67f4da39bdc 120 Gene3D G3DSA:3.40.1230.10 8 120 3.6E-21 T 11-10-2018 IPR036748 MTH938-like superfamily Rmag_0548 032af1d18691e843b2916efe681bb8f3 123 Gene3D G3DSA:2.60.40.1470 1 123 2.0E-42 T 11-10-2018 IPR036767 ApaG domain superfamily Rmag_0548 032af1d18691e843b2916efe681bb8f3 123 Pfam PF04379 ApaG domain 16 100 2.6E-30 T 11-10-2018 IPR007474 ApaG domain Rmag_0548 032af1d18691e843b2916efe681bb8f3 123 SUPERFAMILY SSF110069 2 123 1.96E-43 T 11-10-2018 IPR036767 ApaG domain superfamily Rmag_0214 f44c7bb81c9141fb34b85cc3101db02a 134 Pfam PF00571 CBS domain 77 127 3.8E-9 T 11-10-2018 IPR000644 CBS domain Rmag_0214 f44c7bb81c9141fb34b85cc3101db02a 134 SUPERFAMILY SSF54631 7 127 2.53E-23 T 11-10-2018 Rmag_0214 f44c7bb81c9141fb34b85cc3101db02a 134 SMART SM00116 84 131 0.0031 T 11-10-2018 IPR000644 CBS domain Rmag_0214 f44c7bb81c9141fb34b85cc3101db02a 134 Gene3D G3DSA:3.10.580.10 3 132 2.9E-25 T 11-10-2018 Rmag_0631 56746e9e6dc2bfec41e5ef5d29067b72 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 77.746 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Rmag_0631 56746e9e6dc2bfec41e5ef5d29067b72 149 Pfam PF03477 ATP cone domain 51 136 4.8E-13 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Rmag_0631 56746e9e6dc2bfec41e5ef5d29067b72 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.8E-58 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Rmag_0347 6759bcf75596fe6fec6e8af2808914aa 210 Pfam PF02163 Peptidase family M50 122 162 2.5E-7 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 5 251 37.933 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 249 3.8E-76 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 6.0E-14 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 6.0E-14 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 6.0E-14 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 6.0E-14 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 Pfam PF00459 Inositol monophosphatase family 10 239 2.0E-47 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 SUPERFAMILY SSF56655 9 250 4.84E-64 T 11-10-2018 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 Gene3D G3DSA:3.30.540.10 6 152 2.1E-40 T 11-10-2018 Rmag_0107 510f1e518533b8a5b2127ceb9dcba2ad 252 Gene3D G3DSA:3.40.190.80 153 252 4.8E-27 T 11-10-2018 Rmag_0117 b2afef1be618095f9e55ad1b382445d2 222 Gene3D G3DSA:3.40.50.1000 9 215 1.8E-55 T 11-10-2018 IPR023214 HAD superfamily Rmag_0117 b2afef1be618095f9e55ad1b382445d2 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 222 6.3E-62 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Rmag_0117 b2afef1be618095f9e55ad1b382445d2 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 8.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Rmag_0117 b2afef1be618095f9e55ad1b382445d2 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 191 3.1E-31 T 11-10-2018 Rmag_0117 b2afef1be618095f9e55ad1b382445d2 222 SUPERFAMILY SSF56784 5 222 3.25E-56 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0117 b2afef1be618095f9e55ad1b382445d2 222 Gene3D G3DSA:1.10.150.240 21 92 1.8E-55 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Rmag_0864 52905cc91d97935267bbe3268cf22a37 257 Gene3D G3DSA:1.20.950.20 61 219 4.0E-18 T 11-10-2018 Rmag_0864 52905cc91d97935267bbe3268cf22a37 257 Pfam PF02665 Nitrate reductase gamma subunit 68 213 5.2E-13 T 11-10-2018 IPR023234 NarG-like domain Rmag_0864 52905cc91d97935267bbe3268cf22a37 257 SUPERFAMILY SSF103501 6 234 2.09E-40 T 11-10-2018 IPR036197 NarG-like superfamily Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 177 390 6.0E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 SUPERFAMILY SSF111369 61 128 2.48E-6 T 11-10-2018 Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 Gene3D G3DSA:2.40.30.170 61 316 4.4E-41 T 11-10-2018 Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 Gene3D G3DSA:2.40.420.20 317 390 4.4E-41 T 11-10-2018 Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 298 2.2E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 Gene3D G3DSA:1.10.287.470 103 203 4.4E-41 T 11-10-2018 Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 SUPERFAMILY SSF111369 180 261 1.7E-6 T 11-10-2018 Rmag_0545 974cca1e3babbf9469a3d3d75c07b541 391 Gene3D G3DSA:2.40.50.100 69 242 4.4E-41 T 11-10-2018 Rmag_0767 502a028220937feb7f534529682604be 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 16 212 2.8E-38 T 11-10-2018 IPR006214 Bax inhibitor 1-related Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 178 2.9E-37 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 SUPERFAMILY SSF47928 1 108 1.1E-17 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 181 17.323 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 141 160 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 PRINTS PR00125 ATP synthase delta subunit signature 6 25 4.3E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 PRINTS PR00125 ATP synthase delta subunit signature 89 103 4.3E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 PRINTS PR00125 ATP synthase delta subunit signature 139 154 4.3E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 PRINTS PR00125 ATP synthase delta subunit signature 154 172 4.3E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 PRINTS PR00125 ATP synthase delta subunit signature 78 89 4.3E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 179 5.4E-35 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_1048 475d2715de5b37e8d84a17658a894fa3 183 Gene3D G3DSA:1.10.520.20 1 110 1.3E-21 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Rmag_0892 e40432455e8acd9a7c5c858499107ce8 212 Pfam PF04991 LicD family 44 90 1.5E-6 T 11-10-2018 IPR007074 LicD family Rmag_0389 a683e86e0745e3ca9090186689b2a70c 109 SUPERFAMILY SSF52833 1 101 6.63E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0389 a683e86e0745e3ca9090186689b2a70c 109 Pfam PF00462 Glutaredoxin 16 80 4.1E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Rmag_0389 a683e86e0745e3ca9090186689b2a70c 109 Gene3D G3DSA:3.40.30.10 6 102 3.6E-26 T 11-10-2018 Rmag_0389 a683e86e0745e3ca9090186689b2a70c 109 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.6E-39 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related Rmag_0389 a683e86e0745e3ca9090186689b2a70c 109 PIRSF PIRSF005894 1 107 5.0E-40 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Rmag_1035 6cead941e209a62cab14a7901a25fe9f 163 Pfam PF04361 Protein of unknown function (DUF494) 5 162 1.7E-46 T 11-10-2018 IPR007456 Smg Rmag_1035 6cead941e209a62cab14a7901a25fe9f 163 Hamap MF_00598 Protein Smg [smg]. 5 163 22.996 T 11-10-2018 IPR007456 Smg Rmag_0558 a9f7265bbf07bdb90ba25ad2c39f31aa 89 PIRSF PIRSF029827 1 89 1.4E-33 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Rmag_0558 a9f7265bbf07bdb90ba25ad2c39f31aa 89 Pfam PF04362 Bacterial Fe(2+) trafficking 2 87 8.1E-36 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Rmag_0558 a9f7265bbf07bdb90ba25ad2c39f31aa 89 SUPERFAMILY SSF111148 2 88 7.85E-33 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Rmag_0558 a9f7265bbf07bdb90ba25ad2c39f31aa 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 2 74 2.0E-21 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Rmag_0558 a9f7265bbf07bdb90ba25ad2c39f31aa 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 87 21.971 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Rmag_0558 a9f7265bbf07bdb90ba25ad2c39f31aa 89 Gene3D G3DSA:1.10.3880.10 1 89 2.9E-35 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Rmag_0535 a7184d070011de4b2a4084c3468cc720 755 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 28 732 15.787 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Rmag_0535 a7184d070011de4b2a4084c3468cc720 755 Pfam PF03968 OstA-like protein 98 199 1.7E-4 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Rmag_0535 a7184d070011de4b2a4084c3468cc720 755 Pfam PF04453 Organic solvent tolerance protein 328 649 6.2E-49 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Rmag_0247 11528ce3dc8ffb48ddaa473a396d954e 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 94 6.8E-21 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Rmag_0247 11528ce3dc8ffb48ddaa473a396d954e 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.378 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Rmag_0482 9a88ca0901a10adc77ef410b0c0a0b7a 284 SUPERFAMILY SSF48576 8 263 4.73E-71 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Rmag_0482 9a88ca0901a10adc77ef410b0c0a0b7a 284 Pfam PF00348 Polyprenyl synthetase 24 259 1.3E-50 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Rmag_0482 9a88ca0901a10adc77ef410b0c0a0b7a 284 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Rmag_0482 9a88ca0901a10adc77ef410b0c0a0b7a 284 Gene3D G3DSA:1.10.600.10 2 280 3.2E-79 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Rmag_0560 b627cc6a72228559b147b77783fb7298 280 SUPERFAMILY SSF88946 22 118 1.06E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 Gene3D G3DSA:1.20.120.1810 4 118 1.2E-25 T 11-10-2018 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 SUPERFAMILY SSF88659 183 278 3.92E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Rmag_0560 b627cc6a72228559b147b77783fb7298 280 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 73 86 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 PIRSF PIRSF000770 11 279 1.1E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 Gene3D G3DSA:1.10.10.10 209 280 1.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Rmag_0560 b627cc6a72228559b147b77783fb7298 280 Pfam PF04545 Sigma-70, region 4 222 272 2.6E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 18 276 9.2E-106 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 Pfam PF04542 Sigma-70 region 2 49 118 1.1E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 PRINTS PR00046 Major sigma-70 factor signature 226 238 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 PRINTS PR00046 Major sigma-70 factor signature 260 271 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 PRINTS PR00046 Major sigma-70 factor signature 97 105 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 PRINTS PR00046 Major sigma-70 factor signature 73 86 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 PRINTS PR00046 Major sigma-70 factor signature 245 260 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Rmag_0560 b627cc6a72228559b147b77783fb7298 280 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 275 1.0E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Rmag_0605 e98352405234eabcb183d135148fe262 261 Pfam PF01578 Cytochrome C assembly protein 63 259 3.6E-28 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 50.376 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 Gene3D G3DSA:3.90.1150.10 10 396 1.9E-177 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 8.4E-172 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 PIRSF PIRSF000412 1 417 4.6E-161 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 SUPERFAMILY SSF53383 5 416 3.84E-173 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 Gene3D G3DSA:3.40.640.10 37 289 1.9E-177 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Rmag_0632 a3526303879000f058e34a6cc5e2f828 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Rmag_0510 48ad6bb75af8b2611373c9f32d988e5b 163 Hamap MF_00984 Single-stranded DNA-binding protein. 4 115 36.942 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Rmag_0510 48ad6bb75af8b2611373c9f32d988e5b 163 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 163 1.7E-53 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Rmag_0510 48ad6bb75af8b2611373c9f32d988e5b 163 Pfam PF00436 Single-strand binding protein family 4 103 2.8E-40 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Rmag_0510 48ad6bb75af8b2611373c9f32d988e5b 163 PIRSF PIRSF002070 1 156 1.7E-36 T 11-10-2018 Rmag_0510 48ad6bb75af8b2611373c9f32d988e5b 163 Gene3D G3DSA:2.40.50.140 2 144 4.3E-48 T 11-10-2018 Rmag_0510 48ad6bb75af8b2611373c9f32d988e5b 163 SUPERFAMILY SSF50249 3 163 6.51E-55 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Rmag_0689 85e6793a6ff5a09f7d4e797ee39681b3 120 SUPERFAMILY SSF54690 1 119 2.22E-42 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Rmag_0689 85e6793a6ff5a09f7d4e797ee39681b3 120 Pfam PF02391 MoaE protein 1 90 1.7E-30 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Rmag_0689 85e6793a6ff5a09f7d4e797ee39681b3 120 Gene3D G3DSA:3.90.1170.40 1 119 6.2E-43 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 334 539 6.8E-18 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Pfam PF11412 Disulphide bond corrector protein DsbC 22 133 5.4E-28 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Pfam PF11412 Disulphide bond corrector protein DsbC 171 283 1.5E-26 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Gene3D G3DSA:3.40.30.10 616 741 3.3E-28 T 11-10-2018 Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 741 32.671 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Gene3D G3DSA:2.60.40.1250 13 150 4.8E-36 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Gene3D G3DSA:2.60.40.1250 166 298 2.1E-33 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 SUPERFAMILY SSF74863 21 135 1.44E-31 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 Pfam PF00085 Thioredoxin 641 738 3.3E-10 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 SUPERFAMILY SSF74863 170 283 1.57E-30 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Rmag_1057 bc8f7cc7454d9084b2ee08ae717b582f 741 SUPERFAMILY SSF52833 629 739 9.12E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0649 e8eed2798da32c6c3b01a71747e589d5 573 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 567 4.2E-144 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Rmag_0649 e8eed2798da32c6c3b01a71747e589d5 573 Gene3D G3DSA:3.90.1640.30 44 321 1.2E-84 T 11-10-2018 Rmag_0649 e8eed2798da32c6c3b01a71747e589d5 573 Pfam PF01368 DHH family 67 173 1.7E-8 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Rmag_0649 e8eed2798da32c6c3b01a71747e589d5 573 SUPERFAMILY SSF64182 49 458 3.92E-107 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Rmag_0649 e8eed2798da32c6c3b01a71747e589d5 573 Gene3D G3DSA:3.10.310.30 329 457 1.2E-30 T 11-10-2018 Rmag_0649 e8eed2798da32c6c3b01a71747e589d5 573 Pfam PF02272 DHHA1 domain 317 452 1.0E-22 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Rmag_0722 5fb320d8264cfcee3637d7a5bf94dfff 130 Pfam PF09722 Protein of unknown function (DUF2384) 84 123 2.8E-5 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 Rmag_0722 5fb320d8264cfcee3637d7a5bf94dfff 130 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 20 124 2.0E-7 T 11-10-2018 IPR020358 Uncharacterised protein family Y4oB Rmag_0264 660e5fac483bf191bcc9897ff5750c28 247 Pfam PF11306 Protein of unknown function (DUF3108) 16 220 1.8E-14 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 Rmag_0679 d3408022426cf913e1aa1901a760b694 202 SUPERFAMILY SSF53955 8 160 5.25E-23 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Rmag_0679 d3408022426cf913e1aa1901a760b694 202 Gene3D G3DSA:1.10.530.10 33 189 1.3E-15 T 11-10-2018 Rmag_0679 d3408022426cf913e1aa1901a760b694 202 Pfam PF01464 Transglycosylase SLT domain 43 160 3.7E-8 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Rmag_0343 d307ccfec0d4d69dab75e7d1f2b8d488 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 19.036 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Rmag_0343 d307ccfec0d4d69dab75e7d1f2b8d488 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 90 4.2E-14 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Rmag_0343 d307ccfec0d4d69dab75e7d1f2b8d488 95 SUPERFAMILY SSF141000 2 93 1.31E-24 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Rmag_0343 d307ccfec0d4d69dab75e7d1f2b8d488 95 Gene3D G3DSA:1.10.20.60 1 93 9.4E-20 T 11-10-2018 Rmag_0343 d307ccfec0d4d69dab75e7d1f2b8d488 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 1.1E-25 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Rmag_0083 69f4bcf2609b663e3d40a7028345d4e0 320 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 27 193 3.3E-17 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Rmag_0083 69f4bcf2609b663e3d40a7028345d4e0 320 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 241 320 9.7E-5 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Rmag_0083 69f4bcf2609b663e3d40a7028345d4e0 320 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 26 194 3.6E-19 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Rmag_0083 69f4bcf2609b663e3d40a7028345d4e0 320 Gene3D G3DSA:2.60.450.10 76 200 6.4E-10 T 11-10-2018 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PIRSF PIRSF000724 1 389 1.1E-134 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.0E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 SUPERFAMILY SSF53748 4 383 1.02E-144 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 Gene3D G3DSA:3.40.50.1260 10 379 2.5E-149 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 Pfam PF00162 Phosphoglycerate kinase 8 373 8.5E-141 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 Gene3D G3DSA:3.40.50.1260 165 373 2.5E-149 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0065 4c56d6ed3854a07d0f167ff02ccdb6cc 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.91 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Rmag_0925 b688c49f08564a9d2c49d7ca952bc23b 216 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 214 16.122 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Rmag_0925 b688c49f08564a9d2c49d7ca952bc23b 216 Pfam PF04279 Intracellular septation protein A 1 213 1.5E-69 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Rmag_0309 e745b111ebfcdf25e2efd0776c28f03b 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 23.672 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0309 e745b111ebfcdf25e2efd0776c28f03b 361 Pfam PF00953 Glycosyl transferase family 4 99 285 7.1E-37 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Rmag_0309 e745b111ebfcdf25e2efd0776c28f03b 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0309 e745b111ebfcdf25e2efd0776c28f03b 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 5.7E-123 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0309 e745b111ebfcdf25e2efd0776c28f03b 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0309 e745b111ebfcdf25e2efd0776c28f03b 361 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.9E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0294 856a14da2b99c3d0cddf753dc8514a47 298 PIRSF PIRSF026649 1 298 2.1E-101 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Rmag_0294 856a14da2b99c3d0cddf753dc8514a47 298 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 289 3.1E-56 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 Pfam PF01632 Ribosomal protein L35 3 63 5.2E-24 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 Gene3D G3DSA:2.40.50.530 2 66 1.3E-21 T 11-10-2018 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 6 32 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 SUPERFAMILY SSF143034 3 65 3.53E-23 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 2 65 17.732 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 65 2.7E-25 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 PRINTS PR00064 Ribosomal protein L35 signature 22 36 1.5E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 PRINTS PR00064 Ribosomal protein L35 signature 4 21 1.5E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Rmag_0646 23399cf0115b68bbb0bce73c5c4bf669 66 PRINTS PR00064 Ribosomal protein L35 signature 37 55 1.5E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Rmag_0876 43058ff8e7a150bfe951a4da576090c1 228 PRINTS PR01805 VacJ lipoprotein signature 127 144 7.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Rmag_0876 43058ff8e7a150bfe951a4da576090c1 228 PRINTS PR01805 VacJ lipoprotein signature 40 56 7.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Rmag_0876 43058ff8e7a150bfe951a4da576090c1 228 PRINTS PR01805 VacJ lipoprotein signature 23 36 7.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Rmag_0876 43058ff8e7a150bfe951a4da576090c1 228 PRINTS PR01805 VacJ lipoprotein signature 91 108 7.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Rmag_0876 43058ff8e7a150bfe951a4da576090c1 228 Pfam PF04333 MlaA lipoprotein 23 214 8.6E-66 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Rmag_0964 894f4585ba0726fe215c4ca16d6da5fe 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 26 201 1.8E-29 T 11-10-2018 Rmag_0964 894f4585ba0726fe215c4ca16d6da5fe 217 Gene3D G3DSA:3.40.50.150 24 215 6.1E-39 T 11-10-2018 Rmag_0964 894f4585ba0726fe215c4ca16d6da5fe 217 SUPERFAMILY SSF53335 1 178 2.11E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0595 aca09accd73a1072a75aebf1db60a61b 145 Gene3D G3DSA:1.10.8.640 17 99 4.8E-28 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Rmag_0595 aca09accd73a1072a75aebf1db60a61b 145 Pfam PF03918 Cytochrome C biogenesis protein 9 134 9.8E-41 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.5E-28 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.9E-49 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 SUPERFAMILY SSF46946 2 114 2.21E-41 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 117 25.098 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 PIRSF PIRSF002134 1 117 1.6E-39 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 Gene3D G3DSA:1.10.8.50 1 71 2.0E-24 T 11-10-2018 Rmag_0187 f8e3161c5affc9a8c73e4be872091a84 117 Gene3D G3DSA:4.10.910.10 72 117 4.5E-24 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 PIRSF PIRSF000077 1 104 3.7E-28 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 Gene3D G3DSA:3.40.30.10 1 115 1.4E-32 T 11-10-2018 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 SUPERFAMILY SSF52833 2 103 1.05E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 PRINTS PR00421 Thioredoxin family signature 68 79 5.6E-8 T 11-10-2018 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 PRINTS PR00421 Thioredoxin family signature 29 38 5.6E-8 T 11-10-2018 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 PRINTS PR00421 Thioredoxin family signature 21 29 5.6E-8 T 11-10-2018 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 7.0E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Rmag_0716 8eb85cc8fb6e29b88b9a5ccd35f85ef5 117 Pfam PF00085 Thioredoxin 3 102 4.2E-29 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Rmag_0506 125db2bc24fc17a425b3bc13315ae41a 167 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 162 27.901 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0506 125db2bc24fc17a425b3bc13315ae41a 167 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 18 158 1.3E-45 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0506 125db2bc24fc17a425b3bc13315ae41a 167 Gene3D G3DSA:3.40.50.960 8 164 6.4E-53 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0506 125db2bc24fc17a425b3bc13315ae41a 167 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 159 5.4E-49 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0506 125db2bc24fc17a425b3bc13315ae41a 167 SUPERFAMILY SSF52121 12 162 1.96E-51 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Rmag_0729 f4e284533c4ba762177a05b8fe0b0e4f 170 SUPERFAMILY SSF89392 16 165 4.32E-12 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Rmag_0729 f4e284533c4ba762177a05b8fe0b0e4f 170 Gene3D G3DSA:2.50.20.10 21 119 1.6E-5 T 11-10-2018 Rmag_0729 f4e284533c4ba762177a05b8fe0b0e4f 170 Pfam PF03550 Outer membrane lipoprotein LolB 36 165 5.6E-7 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Rmag_0322 f4563d7a103d5657814903afda31b39a 315 SUPERFAMILY SSF102114 84 304 3.14E-16 T 11-10-2018 Rmag_0322 f4563d7a103d5657814903afda31b39a 315 TIGRFAM TIGR00238 TIGR00238: KamA family protein 21 306 1.3E-89 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Rmag_0322 f4563d7a103d5657814903afda31b39a 315 Gene3D G3DSA:3.20.20.70 34 312 2.7E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0322 f4563d7a103d5657814903afda31b39a 315 PIRSF PIRSF004911 2 315 1.7E-96 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Rmag_0129 ea0688beebf1df4793c74ed29855e4a2 488 PIRSF PIRSF016636 1 488 1.1E-152 T 11-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Rmag_0129 ea0688beebf1df4793c74ed29855e4a2 488 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 110 378 4.6E-37 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Rmag_0129 ea0688beebf1df4793c74ed29855e4a2 488 PIRSF PIRSF500217 1 488 3.8E-150 T 11-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Rmag_0077 68781fc1645683ee7ada89249bd7c4a7 233 SMART SM00382 30 223 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Rmag_0077 68781fc1645683ee7ada89249bd7c4a7 233 SUPERFAMILY SSF52540 3 213 2.31E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0077 68781fc1645683ee7ada89249bd7c4a7 233 Pfam PF00005 ABC transporter 21 149 2.4E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Rmag_0077 68781fc1645683ee7ada89249bd7c4a7 233 Gene3D G3DSA:3.40.50.300 1 233 3.3E-50 T 11-10-2018 Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 18 256 3.1E-75 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 Pfam PF05175 Methyltransferase small domain 96 179 5.4E-15 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 SUPERFAMILY SSF53335 7 250 1.7E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 168 174 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 Gene3D G3DSA:3.40.50.150 75 261 1.2E-53 T 11-10-2018 Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 Gene3D G3DSA:1.10.8.10 8 74 2.5E-11 T 11-10-2018 Rmag_0790 fa75d9edcd4deee66a4108e297d652d6 261 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 259 1.4E-65 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 28 170 1.5E-36 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 Gene3D G3DSA:3.30.460.80 1 152 9.0E-37 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 4 180 32.802 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 27 173 6.2E-42 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 100 159 5.0E-17 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 133 154 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0239 11907640f3c865750742fcf354c8d42e 204 SUPERFAMILY SSF143243 4 196 4.58E-54 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0897 b7820a9c90cff6bffa86138d5a4de83d 523 SUPERFAMILY SSF56112 262 432 1.6E-8 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Rmag_0897 b7820a9c90cff6bffa86138d5a4de83d 523 Gene3D G3DSA:3.90.550.10 1 234 3.6E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0897 b7820a9c90cff6bffa86138d5a4de83d 523 SUPERFAMILY SSF53448 1 223 9.69E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0526 bfe67826bef5bda69f8189e9a4895966 224 Gene3D G3DSA:1.10.4010.10 1 215 1.9E-63 T 11-10-2018 Rmag_0526 bfe67826bef5bda69f8189e9a4895966 224 Pfam PF08761 dUTPase 3 172 1.1E-33 T 11-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 Rmag_0526 bfe67826bef5bda69f8189e9a4895966 224 SUPERFAMILY SSF101386 1 214 1.7E-57 T 11-10-2018 Rmag_0104 362e8c26ab2bca23ed3b3ca55ee0599a 100 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 4 99 3.7E-27 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 Rmag_0104 362e8c26ab2bca23ed3b3ca55ee0599a 100 SMART SM01103 4 87 3.9E-34 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Rmag_0104 362e8c26ab2bca23ed3b3ca55ee0599a 100 SUPERFAMILY SSF75471 3 97 4.32E-27 T 11-10-2018 IPR035920 YhbY-like superfamily Rmag_0104 362e8c26ab2bca23ed3b3ca55ee0599a 100 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 100 2.0E-11 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Rmag_0104 362e8c26ab2bca23ed3b3ca55ee0599a 100 Gene3D G3DSA:3.30.110.60 2 100 3.5E-29 T 11-10-2018 IPR035920 YhbY-like superfamily Rmag_0104 362e8c26ab2bca23ed3b3ca55ee0599a 100 Pfam PF01985 CRS1 / YhbY (CRM) domain 4 87 1.5E-15 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Rmag_0367 ac353dc7ca7dd9593af44c2567e691ec 207 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 28.124 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Rmag_0367 ac353dc7ca7dd9593af44c2567e691ec 207 SUPERFAMILY SSF53335 27 202 9.1E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Rmag_0367 ac353dc7ca7dd9593af44c2567e691ec 207 Pfam PF01728 FtsJ-like methyltransferase 28 201 7.3E-51 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Rmag_0367 ac353dc7ca7dd9593af44c2567e691ec 207 Gene3D G3DSA:3.40.50.150 27 205 3.8E-55 T 11-10-2018 Rmag_0367 ac353dc7ca7dd9593af44c2567e691ec 207 PIRSF PIRSF005461 1 207 1.6E-73 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Rmag_0899 80dbabf3f0eadbaa421920d2b3130df2 381 SUPERFAMILY SSF51569 5 364 1.78E-41 T 11-10-2018 Rmag_0899 80dbabf3f0eadbaa421920d2b3130df2 381 Gene3D G3DSA:3.20.20.70 12 264 3.1E-18 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0385 54e5dfeee59fcfaf74dd38236bba7e0b 164 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 160 3.5E-42 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 Rmag_0033 a143387c5c17ee9c8c45b12d55bf031f 274 Pfam PF09955 Predicted integral membrane protein (DUF2189) 73 205 4.9E-25 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 Rmag_0894 1c887ead87b2015e6daa44e4105d958c 314 SUPERFAMILY SSF53448 13 294 1.15E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Rmag_0525 61410dc33e73372e69c54da4f06110ab 87 Gene3D G3DSA:3.10.20.30 1 87 1.2E-13 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Rmag_0525 61410dc33e73372e69c54da4f06110ab 87 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 77 7.8E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Rmag_0525 61410dc33e73372e69c54da4f06110ab 87 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Rmag_0525 61410dc33e73372e69c54da4f06110ab 87 SUPERFAMILY SSF54292 3 83 1.97E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Rmag_0026 af63835aa445ecae98d0a74d14332e7c 266 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Rmag_0026 af63835aa445ecae98d0a74d14332e7c 266 Pfam PF01148 Cytidylyltransferase family 3 263 3.5E-59 T 11-10-2018 Rmag_0331 9254badfe5e3479c53af1e8049de2916 131 SUPERFAMILY SSF51306 19 102 3.31E-16 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Rmag_0331 9254badfe5e3479c53af1e8049de2916 131 Gene3D G3DSA:2.10.109.10 2 109 6.9E-18 T 11-10-2018 Rmag_0331 9254badfe5e3479c53af1e8049de2916 131 Pfam PF00717 Peptidase S24-like 31 91 2.0E-6 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Rmag_0457 4f797f81dc83b5c42ee53078359f5df2 125 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 123 6.0E-22 T 11-10-2018 Rmag_0457 4f797f81dc83b5c42ee53078359f5df2 125 PIRSF PIRSF004923 1 125 1.9E-24 T 11-10-2018 IPR026268 Protein RseC Rmag_0826 b4fcf796da256214e881e1031759a47f 236 SMART SM00849 14 173 1.7E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase Rmag_0826 b4fcf796da256214e881e1031759a47f 236 Pfam PF00753 Metallo-beta-lactamase superfamily 106 173 6.6E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase Rmag_0826 b4fcf796da256214e881e1031759a47f 236 Gene3D G3DSA:3.60.15.10 3 235 3.9E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Rmag_0826 b4fcf796da256214e881e1031759a47f 236 SUPERFAMILY SSF56281 14 193 4.34E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Rmag_0217 dbbcd4d7d92f10e75938295c74314d6d 243 Pfam PF07556 Protein of unknown function (DUF1538) 22 241 4.6E-67 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 Rmag_1000 e97c064c34ccacfd450c84b703dc886f 282 Pfam PF02674 Colicin V production protein 19 101 7.3E-13 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Rmag_0597 7f0035c1c6e6a9255764df8183a92f69 209 SUPERFAMILY SSF56784 4 186 8.42E-12 T 11-10-2018 IPR036412 HAD-like superfamily Rmag_0597 7f0035c1c6e6a9255764df8183a92f69 209 Gene3D G3DSA:3.40.50.1000 49 204 1.6E-10 T 11-10-2018 IPR023214 HAD superfamily Rmag_0478 74f307dbf8949d424989982ffe64f0aa 371 Pfam PF03739 Predicted permease YjgP/YjgQ family 20 368 6.0E-63 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Rmag_0478 74f307dbf8949d424989982ffe64f0aa 371 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 17 370 1.3E-83 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Rmag_0221 6382ce3bc1adbde00dc8c00e76ca61ff 335 Pfam PF13177 DNA polymerase III, delta subunit 7 172 2.0E-26 T 11-10-2018 Rmag_0221 6382ce3bc1adbde00dc8c00e76ca61ff 335 Gene3D G3DSA:3.40.50.300 1 173 6.5E-32 T 11-10-2018 Rmag_0221 6382ce3bc1adbde00dc8c00e76ca61ff 335 SUPERFAMILY SSF52540 3 211 2.09E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 Gene3D G3DSA:3.40.190.10 93 174 2.2E-70 T 11-10-2018 Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 Gene3D G3DSA:3.40.190.10 3 195 2.2E-70 T 11-10-2018 Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 SUPERFAMILY SSF53850 1 202 3.26E-61 T 11-10-2018 Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 2.8E-58 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 205 50.566 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Rmag_0601 5976b060c7f45228c07a7d5d3c386fda 205 Pfam PF01634 ATP phosphoribosyltransferase 51 202 2.0E-49 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Rmag_0933 208648dd7853ebeca94b2760972ef8a3 82 PRINTS PR00160 Glutaredoxin signature 45 58 5.9E-5 T 11-10-2018 IPR014025 Glutaredoxin subgroup Rmag_0933 208648dd7853ebeca94b2760972ef8a3 82 PRINTS PR00160 Glutaredoxin signature 4 22 5.9E-5 T 11-10-2018 IPR014025 Glutaredoxin subgroup Rmag_0933 208648dd7853ebeca94b2760972ef8a3 82 Gene3D G3DSA:3.40.30.10 1 82 9.7E-17 T 11-10-2018 Rmag_0933 208648dd7853ebeca94b2760972ef8a3 82 Pfam PF00462 Glutaredoxin 5 62 4.5E-11 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Rmag_0933 208648dd7853ebeca94b2760972ef8a3 82 SUPERFAMILY SSF52833 3 82 6.22E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0742 0117b45540375213666637d33cbaa5e9 341 Pfam PF00924 Mechanosensitive ion channel 129 330 1.3E-51 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Rmag_0742 0117b45540375213666637d33cbaa5e9 341 Gene3D G3DSA:2.30.30.60 186 231 3.4E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Rmag_0742 0117b45540375213666637d33cbaa5e9 341 Gene3D G3DSA:3.30.70.100 236 334 5.3E-15 T 11-10-2018 Rmag_0742 0117b45540375213666637d33cbaa5e9 341 SUPERFAMILY SSF50182 170 232 4.58E-17 T 11-10-2018 IPR010920 LSM domain superfamily Rmag_0742 0117b45540375213666637d33cbaa5e9 341 SUPERFAMILY SSF82861 87 169 2.75E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Rmag_0742 0117b45540375213666637d33cbaa5e9 341 SUPERFAMILY SSF82689 237 340 6.02E-17 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Rmag_0974 8140a360e4ad6874f357e3754de44dcc 253 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 7 217 6.4E-54 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Rmag_0807 8b03d1ff1a4ba3f0a219658c7ecb64a7 147 PIRSF PIRSF010312 1 147 3.7E-34 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY Rmag_0807 8b03d1ff1a4ba3f0a219658c7ecb64a7 147 Gene3D G3DSA:2.60.40.2470 30 146 1.6E-31 T 11-10-2018 IPR038162 Ig-like SoxY domain superfamily Rmag_0807 8b03d1ff1a4ba3f0a219658c7ecb64a7 147 Pfam PF13501 Sulfur oxidation protein SoxY 52 145 1.1E-28 T 11-10-2018 IPR032711 Ig-like SoxY domain Rmag_0807 8b03d1ff1a4ba3f0a219658c7ecb64a7 147 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 147 1.9E-39 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY Rmag_0712 7df9ad72cb214d9988cf74ecefb51cfa 435 Pfam PF09375 Imelysin 42 411 2.8E-74 T 11-10-2018 IPR018976 Imelysin-like domain Rmag_0712 7df9ad72cb214d9988cf74ecefb51cfa 435 Gene3D G3DSA:1.20.1420.20 21 413 2.9E-66 T 11-10-2018 IPR038352 Imelysin-like domain superfamily Rmag_0682 f9ffdc7bbf3f1338bc654179c605f9e9 160 Gene3D G3DSA:3.40.30.10 22 151 2.2E-20 T 11-10-2018 Rmag_0682 f9ffdc7bbf3f1338bc654179c605f9e9 160 SUPERFAMILY SSF52833 5 147 1.3E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Rmag_0682 f9ffdc7bbf3f1338bc654179c605f9e9 160 Pfam PF00578 AhpC/TSA family 33 140 2.2E-8 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Rmag_0927 f139ae5e128370b9d87c5bce5582e7d4 135 Gene3D G3DSA:3.30.1330.40 1 130 1.2E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Rmag_0927 f139ae5e128370b9d87c5bce5582e7d4 135 SUPERFAMILY SSF55298 1 129 2.83E-39 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Rmag_0927 f139ae5e128370b9d87c5bce5582e7d4 135 Pfam PF01042 Endoribonuclease L-PSP 9 127 1.7E-35 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Rmag_0927 f139ae5e128370b9d87c5bce5582e7d4 135 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 2.2E-45 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Rmag_0998 9b5f18e79c89ea70a9e541f572af34f9 150 Pfam PF04186 FxsA cytoplasmic membrane protein 5 109 5.2E-32 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Rmag_0832 0da816d0f8f4b39004c8503f8c5f3cc0 265 SUPERFAMILY SSF51366 15 264 3.77E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Rmag_0832 0da816d0f8f4b39004c8503f8c5f3cc0 265 Gene3D G3DSA:3.20.20.70 2 265 1.2E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Rmag_0832 0da816d0f8f4b39004c8503f8c5f3cc0 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 262 2.3E-89 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Rmag_0832 0da816d0f8f4b39004c8503f8c5f3cc0 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 265 33.918 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Rmag_0832 0da816d0f8f4b39004c8503f8c5f3cc0 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 59 77 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Rmag_0901 e514236b2e96230fd55844eeaf4bd4bd 442 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 338 420 2.3E-9 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Rmag_0901 e514236b2e96230fd55844eeaf4bd4bd 442 Pfam PF01943 Polysaccharide biosynthesis protein 19 283 7.8E-26 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Rmag_0249 5cc1f03c822f7e1d51404cef5e2905e7 501 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 495 1.0E-183 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0249 5cc1f03c822f7e1d51404cef5e2905e7 501 Pfam PF00361 Proton-conducting membrane transporter 131 425 1.2E-75 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0249 5cc1f03c822f7e1d51404cef5e2905e7 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 8.4E-39 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0249 5cc1f03c822f7e1d51404cef5e2905e7 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 8.4E-39 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0249 5cc1f03c822f7e1d51404cef5e2905e7 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 8.4E-39 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0249 5cc1f03c822f7e1d51404cef5e2905e7 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 8.4E-39 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0283 f79156fcc25d2e2a0544c644e8bfa04f 146 SMART SM00116 10 58 7.4E-8 T 11-10-2018 IPR000644 CBS domain Rmag_0283 f79156fcc25d2e2a0544c644e8bfa04f 146 SMART SM00116 94 141 5.2E-4 T 11-10-2018 IPR000644 CBS domain Rmag_0283 f79156fcc25d2e2a0544c644e8bfa04f 146 Pfam PF00571 CBS domain 3 57 8.8E-14 T 11-10-2018 IPR000644 CBS domain Rmag_0283 f79156fcc25d2e2a0544c644e8bfa04f 146 Pfam PF00571 CBS domain 87 140 3.5E-10 T 11-10-2018 IPR000644 CBS domain Rmag_0283 f79156fcc25d2e2a0544c644e8bfa04f 146 Gene3D G3DSA:3.10.580.10 1 144 4.0E-36 T 11-10-2018 Rmag_0283 f79156fcc25d2e2a0544c644e8bfa04f 146 SUPERFAMILY SSF54631 1 141 1.64E-35 T 11-10-2018 Rmag_0038 7f6f5e92e6f28116779986b280667f89 248 Pfam PF02104 SURF1 family 31 229 4.6E-30 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Rmag_0364 66ff55186cca08bec276639926ff7f23 482 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 465 2.3E-108 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Rmag_0364 66ff55186cca08bec276639926ff7f23 482 PIRSF PIRSF006247 1 482 1.5E-171 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Rmag_0364 66ff55186cca08bec276639926ff7f23 482 Pfam PF02386 Cation transport protein 39 473 1.8E-73 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Rmag_0795 e6820816c4a645afc90702e896255bd6 264 Gene3D G3DSA:2.40.10.340 113 261 4.8E-31 T 11-10-2018 Rmag_0795 e6820816c4a645afc90702e896255bd6 264 Pfam PF04085 rod shape-determining protein MreC 119 262 8.9E-32 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Rmag_0795 e6820816c4a645afc90702e896255bd6 264 PIRSF PIRSF038471 1 264 2.1E-56 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Rmag_0795 e6820816c4a645afc90702e896255bd6 264 Gene3D G3DSA:2.40.10.350 172 250 4.8E-31 T 11-10-2018 Rmag_0795 e6820816c4a645afc90702e896255bd6 264 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 263 3.0E-46 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Rmag_0218 190ff8ff591589e465c6d33e16fdd45a 286 Gene3D G3DSA:3.20.10.10 119 266 7.1E-39 T 11-10-2018 Rmag_0218 190ff8ff591589e465c6d33e16fdd45a 286 Pfam PF01063 Amino-transferase class IV 27 244 2.4E-41 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Rmag_0218 190ff8ff591589e465c6d33e16fdd45a 286 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 258 8.9E-69 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Rmag_0218 190ff8ff591589e465c6d33e16fdd45a 286 Gene3D G3DSA:3.30.470.10 5 116 2.4E-25 T 11-10-2018 Rmag_0218 190ff8ff591589e465c6d33e16fdd45a 286 SUPERFAMILY SSF56752 6 254 7.98E-53 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Rmag_0246 dbd079933f9aae353948af6f34a10074 202 Gene3D G3DSA:1.20.120.1200 4 166 3.9E-40 T 11-10-2018 Rmag_0246 dbd079933f9aae353948af6f34a10074 202 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 165 8.3E-32 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Rmag_0485 2cc00e87b0264f8c2463f7d2e1471cef 65 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.087 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0485 2cc00e87b0264f8c2463f7d2e1471cef 65 Pfam PF01783 Ribosomal L32p protein family 2 56 2.9E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0485 2cc00e87b0264f8c2463f7d2e1471cef 65 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.6E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Rmag_0485 2cc00e87b0264f8c2463f7d2e1471cef 65 SUPERFAMILY SSF57829 2 55 3.48E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Rmag_0495 a87b44d9c9dbb86d9ca0adba2b082dfc 178 Pfam PF01300 Telomere recombination 11 173 3.1E-25 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Rmag_0495 a87b44d9c9dbb86d9ca0adba2b082dfc 178 SUPERFAMILY SSF55821 6 175 4.27E-34 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Rmag_0495 a87b44d9c9dbb86d9ca0adba2b082dfc 178 Gene3D G3DSA:3.90.870.10 2 178 3.5E-32 T 11-10-2018 Rmag_0501 d22afb710f1b905539b61eecf784281d 377 Pfam PF01098 Cell cycle protein 13 367 2.6E-87 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Rmag_0580 56beaa6ce53ede4ab5e62c5fbe9a6f24 268 PIRSF PIRSF026649 1 268 1.3E-88 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Rmag_0580 56beaa6ce53ede4ab5e62c5fbe9a6f24 268 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 1 263 1.0E-39 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Rmag_0735 e15033b70d6ff90d664bacd2229c3a2e 315 Gene3D G3DSA:3.40.1750.20 165 232 2.0E-60 T 11-10-2018 Rmag_0735 e15033b70d6ff90d664bacd2229c3a2e 315 SUPERFAMILY SSF52096 56 262 6.75E-39 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Rmag_0735 e15033b70d6ff90d664bacd2229c3a2e 315 Gene3D G3DSA:3.90.226.10 68 263 2.0E-60 T 11-10-2018 Rmag_0735 e15033b70d6ff90d664bacd2229c3a2e 315 Pfam PF01343 Peptidase family S49 125 266 1.3E-29 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Rmag_0489 9223125fd70966e9947fd626970593ea 378 Pfam PF02646 RmuC family 84 375 5.6E-94 T 11-10-2018 IPR003798 DNA recombination RmuC Rmag_0582 f9f5342dbb5083c3196ecf196f7c812a 463 SUPERFAMILY SSF56954 5 458 3.4E-32 T 11-10-2018 Rmag_0582 f9f5342dbb5083c3196ecf196f7c812a 463 Pfam PF02321 Outer membrane efflux protein 274 456 9.5E-10 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Rmag_0719 8ea40429ad65d79420c37e39a4de0037 136 Pfam PF09656 Putative transmembrane protein (PGPGW) 69 99 5.9E-7 T 11-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane Rmag_0741 9ac857f24ab65b5dadfe5d64b1badf6f 190 Pfam PF09335 SNARE associated Golgi protein 59 155 1.3E-10 T 11-10-2018 IPR032816 SNARE associated Golgi protein Rmag_0844 5df8d2549443596be1a4fa27ca42cc20 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 411 3.0E-119 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Rmag_0844 5df8d2549443596be1a4fa27ca42cc20 411 Pfam PF02687 FtsX-like permease family 297 403 5.5E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Rmag_0844 5df8d2549443596be1a4fa27ca42cc20 411 Pfam PF12704 MacB-like periplasmic core domain 25 237 3.8E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Rmag_0639 05eda05d8c310f4db4f498a5ece32235 360 Pfam PF01594 AI-2E family transporter 14 349 2.2E-31 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Rmag_0399 e12b3fc7a550ce0ae4f0938df769c6ac 341 Gene3D G3DSA:3.30.2010.10 112 204 5.8E-26 T 11-10-2018 Rmag_0399 e12b3fc7a550ce0ae4f0938df769c6ac 341 Pfam PF01435 Peptidase family M48 124 340 1.3E-28 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Rmag_0796 f37021d484100b907b9ea310b348a8b9 155 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 151 3.7E-21 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Rmag_0796 f37021d484100b907b9ea310b348a8b9 155 Pfam PF04093 rod shape-determining protein MreD 8 152 8.7E-12 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Rmag_0551 f0baa569ee73fe0694ef27fc1194dac3 117 Gene3D G3DSA:3.30.2020.30 1 94 2.0E-21 T 11-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Rmag_0551 f0baa569ee73fe0694ef27fc1194dac3 117 Pfam PF06155 Protein of unknown function (DUF971) 7 90 2.4E-22 T 11-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Rmag_0157 ae52c5e45385a1f26184add1f89fe2bc 375 Pfam PF13795 HupE / UreJ protein 197 344 6.9E-42 T 11-10-2018 IPR032809 Putative HupE/UreJ protein Rmag_0135 1d7c3a15b17ba7c111834f7736697cc9 150 Gene3D G3DSA:3.30.160.150 18 150 1.5E-5 T 11-10-2018 Rmag_0135 1d7c3a15b17ba7c111834f7736697cc9 150 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 149 17.548 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Rmag_0907 cc985c58c20fddaa685eef2829cf2849 262 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 164 1.1E-29 T 11-10-2018 IPR002654 Glycosyl transferase, family 25 Rmag_0128 95f03df77a9d570d19cf9061db0d12be 347 SUPERFAMILY SSF52266 61 342 8.83E-6 T 11-10-2018 Rmag_0297 5079d60f6a27b923dc2db13550211de0 90 Pfam PF04999 Cell division protein FtsL 7 88 1.5E-10 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Rmag_0125 5eff23650d9ee8e48cb45fe63d6ce0bf 426 Pfam PF01384 Phosphate transporter family 26 413 7.1E-111 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Rmag_0771 d562655512da2b3e16afebafa453374e 74 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 9 71 1.4E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Rmag_0771 d562655512da2b3e16afebafa453374e 74 SUPERFAMILY SSF52540 7 34 4.12E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Rmag_0615 ba2ce89f17f1722bfc68a29848bc71c4 220 Pfam PF09559 Cas6 Crispr 20 215 6.6E-53 T 11-10-2018 IPR014174 CRISPR-associated protein, Cas6-related Rmag_0333 de1242a7756bdb517fde194b5e5acc0c 195 Pfam PF06181 Urate oxidase N-terminal 129 195 3.1E-10 T 11-10-2018 IPR010389 Urate oxidase N-terminal Rmag_0486 6ddd8edfaf619a0f919b983b30885b18 166 Pfam PF02620 Uncharacterized ACR, COG1399 60 162 4.4E-14 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Rmag_0887 0395fa2aa8af2c2fa47fc956abe6232d 186 Pfam PF02397 Bacterial sugar transferase 2 179 1.9E-53 T 11-10-2018 IPR003362 Bacterial sugar transferase Rmag_0336 8cba3df47432f1be1ed3feee154fb54b 457 Pfam PF03600 Citrate transporter 44 398 4.5E-45 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Rmag_0032 0bf7f4257702f6d0c819bcf9ad4a4a8a 323 Pfam PF02628 Cytochrome oxidase assembly protein 4 312 1.6E-70 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Rmag_0216 7ec14b80e82dfb41c8959d4ea28ca4ac 246 Pfam PF07556 Protein of unknown function (DUF1538) 17 235 9.2E-69 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 Rmag_0391 4f6f2be6f65210ff142ce3c4c3c36eb2 219 Pfam PF01863 Protein of unknown function DUF45 15 211 1.3E-51 T 11-10-2018 IPR002725 Protein of unknown function DUF45 Rmag_0391 4f6f2be6f65210ff142ce3c4c3c36eb2 219 Gene3D G3DSA:3.30.2010.10 126 212 1.6E-18 T 11-10-2018 Rmag_0859 d6e7c73ab17e0c576051309c6c250024 400 Pfam PF03916 Polysulphide reductase, NrfD 44 332 1.2E-52 T 11-10-2018 IPR005614 NrfD family