locus-tag class description BN424_1 PF08299 Bacterial dnaA protein helix-turn-helix BN424_1 PF00308 Bacterial dnaA protein BN424_10 PF02272 DHHA1 domain BN424_10 PF01368 DHH family BN424_1000 PF09261 Alpha mannosidase middle domain BN424_1000 PF01074 Glycosyl hydrolases family 38 N-terminal domain BN424_1000 PF07748 Glycosyl hydrolases family 38 C-terminal domain BN424_1001 PF02378 Phosphotransferase system, EIIC BN424_1005 PF17932 Tetracyclin repressor-like, C-terminal domain BN424_1005 PF00440 Bacterial regulatory proteins, tetR family BN424_1007 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1008 PF00571 CBS domain BN424_1008 PF00005 ABC transporter BN424_1009 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1010 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1011 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_1012 PF00005 ABC transporter BN424_1013 PF12848 ABC transporter BN424_1013 PF16326 ABC transporter C-terminal domain BN424_1013 PF00005 ABC transporter BN424_1014 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN424_1014 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN424_1015 PF02872 5'-nucleotidase, C-terminal domain BN424_1016 PF06265 Protein of unknown function (DUF1027) BN424_1017 PF13344 Haloacid dehalogenase-like hydrolase BN424_1019 PF04608 Phosphatidylglycerophosphatase A BN424_102 PF13166 AAA domain BN424_1020 PF07293 Protein of unknown function (DUF1450) BN424_1021 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_1022 PF02681 Divergent PAP2 family BN424_1023 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BN424_1024 PF00480 ROK family BN424_1025 PF00155 Aminotransferase class I and II BN424_1026 PF00575 S1 RNA binding domain BN424_1028 PF00342 Phosphoglucose isomerase BN424_104 PF12102 Domain of unknown function (DUF3578) BN424_104 PF07728 AAA domain (dynein-related subfamily) BN424_1057 PF00438 S-adenosylmethionine synthetase, N-terminal domain BN424_1057 PF02773 S-adenosylmethionine synthetase, C-terminal domain BN424_1057 PF02772 S-adenosylmethionine synthetase, central domain BN424_1058 PF07690 Major Facilitator Superfamily BN424_1059 PF06962 Putative rRNA methylase BN424_1060 PF16199 Radical_SAM C-terminal domain BN424_1060 PF04055 Radical SAM superfamily BN424_1061 PF07690 Major Facilitator Superfamily BN424_1062 PF01569 PAP2 superfamily BN424_1065 PF03551 Transcriptional regulator PadR-like family BN424_1067 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BN424_1067 PF01476 LysM domain BN424_1068 PF02378 Phosphotransferase system, EIIC BN424_1068 PF00367 phosphotransferase system, EIIB BN424_1069 PF00230 Major intrinsic protein BN424_1070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN424_1070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN424_1071 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BN424_1071 PF01266 FAD dependent oxidoreductase BN424_1072 PF13286 Phosphohydrolase-associated domain BN424_1072 PF01966 HD domain BN424_1073 PF04138 GtrA-like protein BN424_1074 PF00375 Sodium:dicarboxylate symporter family BN424_1075 PF00206 Lyase BN424_1075 PF10415 Fumarase C C-terminus BN424_1076 PF09334 tRNA synthetases class I (M) BN424_1076 PF13603 Leucyl-tRNA synthetase, Domain 2 BN424_1076 PF00133 tRNA synthetases class I (I, L, M and V) BN424_1076 PF08264 Anticodon-binding domain of tRNA BN424_1079 PF00872 Transposase, Mutator family BN424_1082 PF02567 Phenazine biosynthesis-like protein BN424_1085 PF01943 Polysaccharide biosynthesis protein BN424_1085 PF14667 Polysaccharide biosynthesis C-terminal domain BN424_1086 PF01053 Cys/Met metabolism PLP-dependent enzyme BN424_1087 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_1088 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1089 PF00005 ABC transporter BN424_1090 PF01717 Cobalamin-independent synthase, Catalytic domain BN424_1090 PF08267 Cobalamin-independent synthase, N-terminal domain BN424_1091 PF01717 Cobalamin-independent synthase, Catalytic domain BN424_1091 PF08267 Cobalamin-independent synthase, N-terminal domain BN424_1092 PF02219 Methylenetetrahydrofolate reductase BN424_1092 PF02574 Homocysteine S-methyltransferase BN424_1094 PF01479 S4 domain BN424_1094 PF00849 RNA pseudouridylate synthase BN424_1095 PF01256 Carbohydrate kinase BN424_1096 PF01546 Peptidase family M20/M25/M40 BN424_1097 PF00465 Iron-containing alcohol dehydrogenase BN424_1098 PF00465 Iron-containing alcohol dehydrogenase BN424_1099 PF02308 MgtC family BN424_11 PF01281 Ribosomal protein L9, N-terminal domain BN424_11 PF03948 Ribosomal protein L9, C-terminal domain BN424_1101 PF08241 Methyltransferase domain BN424_1102 PF08331 Domain of unknown function (DUF1730) BN424_1103 PF00588 SpoU rRNA Methylase family BN424_1105 PF00860 Permease family BN424_111 PF01381 Helix-turn-helix BN424_1110 PF00750 tRNA synthetases class I (R) BN424_1110 PF05746 DALR anticodon binding domain BN424_1110 PF03485 Arginyl tRNA synthetase N terminal domain BN424_1111 PF02863 Arginine repressor, C-terminal domain BN424_1111 PF01316 Arginine repressor, DNA binding domain BN424_1112 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN424_1112 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN424_1112 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN424_1112 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN424_1113 PF00248 Aldo/keto reductase family BN424_1115 PF03471 Transporter associated domain BN424_1115 PF00571 CBS domain BN424_1115 PF01595 Cyclin M transmembrane N-terminal domain BN424_1116 PF00905 Penicillin binding protein transpeptidase domain BN424_1116 PF00912 Transglycosylase BN424_1117 PF06133 Control of competence regulator ComK, YlbF/YmcA BN424_1118 PF00149 Calcineurin-like phosphoesterase BN424_1119 PF13514 AAA domain BN424_1120 PF01966 HD domain BN424_1121 PF00639 PPIC-type PPIASE domain BN424_1124 PF01230 HIT domain BN424_1125 PF00005 ABC transporter BN424_1126 PF05975 Bacterial ABC transporter protein EcsB BN424_1127 PF01063 Amino-transferase class IV BN424_1128 PF07690 Major Facilitator Superfamily BN424_1129 PF01636 Phosphotransferase enzyme family BN424_1130 PF02390 Putative methyltransferase BN424_1132 PF05343 M42 glutamyl aminopeptidase BN424_1133 PF00085 Thioredoxin BN424_1134 PF00582 Universal stress protein family BN424_1135 PF14794 Domain of unknown function (DUF4479) BN424_1135 PF01588 Putative tRNA binding domain BN424_1136 PF17854 FtsK alpha domain BN424_1136 PF09397 Ftsk gamma domain BN424_1136 PF01580 FtsK/SpoIIIE family BN424_1138 PF01225 Mur ligase family, catalytic domain BN424_1138 PF02875 Mur ligase family, glutamate ligase domain BN424_1138 PF08245 Mur ligase middle domain BN424_1142 PF01367 5'-3' exonuclease, C-terminal SAM fold BN424_1142 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BN424_1142 PF00476 DNA polymerase family A BN424_1143 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BN424_1143 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BN424_1143 PF06827 Zinc finger found in FPG and IleRS BN424_1144 PF01121 Dephospho-CoA kinase BN424_1145 PF03477 ATP cone domain BN424_1147 PF07319 Primosomal protein DnaI N-terminus BN424_1147 PF01695 IstB-like ATP binding protein BN424_1148 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN424_1148 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN424_1148 PF03129 Anticodon binding domain BN424_1148 PF02824 TGS domain BN424_1149 PF01522 Polysaccharide deacetylase BN424_1149 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BN424_1150 PF05198 Translation initiation factor IF-3, N-terminal domain BN424_1150 PF00707 Translation initiation factor IF-3, C-terminal domain BN424_1151 PF01632 Ribosomal protein L35 BN424_1152 PF00453 Ribosomal protein L20 BN424_1156 PF00872 Transposase, Mutator family BN424_1157 PF00872 Transposase, Mutator family BN424_1162 PF03477 ATP cone domain BN424_1162 PF13597 Anaerobic ribonucleoside-triphosphate reductase BN424_1164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_1165 PF00486 Transcriptional regulatory protein, C terminal BN424_1165 PF00072 Response regulator receiver domain BN424_1166 PF00005 ABC transporter BN424_1167 PF02687 FtsX-like permease family BN424_1168 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_1169 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_1171 PF08279 HTH domain BN424_1171 PF02829 3H domain BN424_1173 PF10502 Signal peptidase, peptidase S26 BN424_1175 PF01926 50S ribosome-binding GTPase BN424_1176 PF01985 CRS1 / YhbY (CRM) domain BN424_1177 PF01467 Cytidylyltransferase-like BN424_1178 PF01966 HD domain BN424_1180 PF13649 Methyltransferase domain BN424_1181 PF16124 RecQ zinc-binding BN424_1181 PF00271 Helicase conserved C-terminal domain BN424_1181 PF09382 RQC domain BN424_1181 PF00570 HRDC domain BN424_1181 PF00270 DEAD/DEAH box helicase BN424_1182 PF05636 HIGH Nucleotidyl Transferase BN424_1184 PF01783 Ribosomal L32p protein family BN424_1186 PF02381 MraZ protein, putative antitoxin-like BN424_1187 PF01795 MraW methylase family BN424_1188 PF04977 Septum formation initiator BN424_1190 PF08245 Mur ligase middle domain BN424_1190 PF02875 Mur ligase family, glutamate ligase domain BN424_1190 PF01225 Mur ligase family, catalytic domain BN424_1191 PF00953 Glycosyl transferase family 4 BN424_1191 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BN424_1192 PF02875 Mur ligase family, glutamate ligase domain BN424_1192 PF08245 Mur ligase middle domain BN424_1193 PF04101 Glycosyltransferase family 28 C-terminal domain BN424_1193 PF03033 Glycosyltransferase family 28 N-terminal domain BN424_1194 PF03799 Cell division protein FtsQ BN424_1194 PF08478 POTRA domain, FtsQ-type BN424_1195 PF02491 SHS2 domain inserted in FTSA BN424_1195 PF11983 Membrane-attachment and polymerisation-promoting switch BN424_1196 PF12327 FtsZ family, C-terminal domain BN424_1196 PF00091 Tubulin/FtsZ family, GTPase domain BN424_1197 PF01168 Alanine racemase, N-terminal domain BN424_1198 PF04472 Cell division protein SepF BN424_1199 PF02325 YGGT family BN424_1200 PF01479 S4 domain BN424_1200 PF17774 Putative RNA-binding domain in YlmH BN424_1201 PF05103 DivIVA protein BN424_1202 PF00133 tRNA synthetases class I (I, L, M and V) BN424_1202 PF06827 Zinc finger found in FPG and IleRS BN424_1202 PF08264 Anticodon-binding domain of tRNA BN424_1203 PF08264 Anticodon-binding domain of tRNA BN424_1203 PF00133 tRNA synthetases class I (I, L, M and V) BN424_1203 PF06827 Zinc finger found in FPG and IleRS BN424_1206 PF00005 ABC transporter BN424_1208 PF01678 Diaminopimelate epimerase BN424_1209 PF00313 'Cold-shock' DNA-binding domain BN424_1210 PF00205 Thiamine pyrophosphate enzyme, central domain BN424_1210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN424_1210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN424_1211 PF03306 Alpha-acetolactate decarboxylase BN424_1213 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BN424_1215 PF04226 Transglycosylase associated protein BN424_1216 PF05816 Toxic anion resistance protein (TelA) BN424_1218 PF00293 NUDIX domain BN424_1220 PF01048 Phosphorylase superfamily BN424_1221 PF00857 Isochorismatase family BN424_1222 PF06013 Proteins of 100 residues with WXG BN424_1225 PF08817 WXG100 protein secretion system (Wss), protein YukD BN424_1226 PF10140 WXG100 protein secretion system (Wss), protein YukC BN424_1227 PF01580 FtsK/SpoIIIE family BN424_1227 PF12538 DNA transporter BN424_125 PF01625 Peptide methionine sulfoxide reductase BN424_1253 PF00012 Hsp70 protein BN424_126 PF01544 CorA-like Mg2+ transporter protein BN424_1260 PF02361 Cobalt transport protein BN424_1260 PF00005 ABC transporter BN424_1261 PF00005 ABC transporter BN424_1262 PF07722 Peptidase C26 BN424_1263 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_1267 PF01032 FecCD transport family BN424_1268 PF01032 FecCD transport family BN424_1269 PF00005 ABC transporter BN424_127 PF00158 Sigma-54 interaction domain BN424_127 PF00874 PRD domain BN424_127 PF03610 PTS system fructose IIA component BN424_1270 PF01497 Periplasmic binding protein BN424_1271 PF06335 Protein of unknown function (DUF1054) BN424_1274 PF00163 Ribosomal protein S4/S9 N-terminal domain BN424_1274 PF01479 S4 domain BN424_1277 PF13185 GAF domain BN424_1279 PF06160 Septation ring formation regulator, EzrA BN424_128 PF00158 Sigma-54 interaction domain BN424_128 PF03610 PTS system fructose IIA component BN424_128 PF00874 PRD domain BN424_1280 PF00266 Aminotransferase class-V BN424_1281 PF02926 THUMP domain BN424_1281 PF02568 Thiamine biosynthesis protein (ThiI) BN424_1282 PF07969 Amidohydrolase family BN424_1283 PF07969 Amidohydrolase family BN424_1284 PF02629 CoA binding domain BN424_1284 PF06971 Putative DNA-binding protein N-terminus BN424_1285 PF08534 Redoxin BN424_1287 PF08264 Anticodon-binding domain of tRNA BN424_1287 PF10458 Valyl tRNA synthetase tRNA binding arm BN424_1287 PF00133 tRNA synthetases class I (I, L, M and V) BN424_1288 PF02875 Mur ligase family, glutamate ligase domain BN424_1288 PF08245 Mur ligase middle domain BN424_1289 PF13419 Haloacid dehalogenase-like hydrolase BN424_129 PF03610 PTS system fructose IIA component BN424_129 PF03830 PTS system sorbose subfamily IIB component BN424_1290 PF04002 RadC-like JAB domain BN424_1291 PF00313 'Cold-shock' DNA-binding domain BN424_1293 PF04085 rod shape-determining protein MreC BN424_1295 PF03775 Septum formation inhibitor MinC, C-terminal domain BN424_1296 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BN424_1297 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_1299 PF00528 Binding-protein-dependent transport system inner membrane component BN424_130 PF03830 PTS system sorbose subfamily IIB component BN424_130 PF03610 PTS system fructose IIA component BN424_1301 PF00829 Ribosomal prokaryotic L21 protein BN424_1303 PF01016 Ribosomal L27 protein BN424_1304 PF00356 Bacterial regulatory proteins, lacI family BN424_1305 PF01156 Inosine-uridine preferring nucleoside hydrolase BN424_1306 PF03606 C4-dicarboxylate anaerobic carrier BN424_1307 PF02384 N-6 DNA Methylase BN424_1308 PF00871 Acetokinase family BN424_1309 PF00582 Universal stress protein family BN424_131 PF03609 PTS system sorbose-specific iic component BN424_1312 PF12002 MgsA AAA+ ATPase C terminal BN424_1312 PF05496 Holliday junction DNA helicase RuvB P-loop domain BN424_1312 PF16193 AAA C-terminal domain BN424_1313 PF03788 LrgA family BN424_1314 PF04172 LrgB-like family BN424_1319 PF04262 Glutamate-cysteine ligase BN424_1319 PF02655 ATP-grasp domain BN424_1319 PF18419 ATP-grasp-like domain BN424_132 PF03613 PTS system mannose/fructose/sorbose family IID component BN424_1322 PF00266 Aminotransferase class-V BN424_1326 PF00300 Histidine phosphatase superfamily (branch 1) BN424_1328 PF13538 UvrD-like helicase C-terminal domain BN424_1328 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BN424_1328 PF14490 Helix-hairpin-helix containing domain BN424_1329 PF02378 Phosphotransferase system, EIIC BN424_1332 PF00781 Diacylglycerol kinase catalytic domain BN424_1333 PF00005 ABC transporter BN424_1335 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BN424_1335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN424_1336 PF02272 DHHA1 domain BN424_1336 PF01411 tRNA synthetases class II (A) BN424_1336 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN424_1337 PF06135 IreB regulatory phosphoprotein BN424_1338 PF03652 Holliday junction resolvase BN424_1339 PF06949 Protein of unknown function (DUF1292) BN424_134 PF00232 Glycosyl hydrolase family 1 BN424_1340 PF02618 YceG-like family BN424_1341 PF00485 Phosphoribulokinase / Uridine kinase family BN424_1342 PF03449 Transcription elongation factor, N-terminal BN424_1342 PF01272 Transcription elongation factor, GreA/GreB, C-term BN424_1344 PF00672 HAMP domain BN424_1344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_1344 PF07730 Histidine kinase BN424_1345 PF00196 Bacterial regulatory proteins, luxR family BN424_1345 PF00072 Response regulator receiver domain BN424_1346 PF02080 TrkA-C domain BN424_1346 PF02254 TrkA-N domain BN424_1347 PF01521 Iron-sulphur cluster biosynthesis BN424_1348 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BN424_1348 PF00753 Metallo-beta-lactamase superfamily BN424_1348 PF17770 Ribonuclease J C-terminal domain BN424_135 PF00367 phosphotransferase system, EIIB BN424_135 PF02378 Phosphotransferase system, EIIC BN424_135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_1350 PF00664 ABC transporter transmembrane region BN424_1350 PF00005 ABC transporter BN424_1351 PF00005 ABC transporter BN424_1351 PF00664 ABC transporter transmembrane region BN424_1355 PF14693 Ribosomal protein TL5, C-terminal domain BN424_1355 PF01386 Ribosomal L25p family BN424_136 PF03123 CAT RNA binding domain BN424_136 PF00874 PRD domain BN424_1360 PF05257 CHAP domain BN424_1360 PF01476 LysM domain BN424_1362 PF01327 Polypeptide deformylase BN424_1363 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BN424_1363 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN424_1364 PF00690 Cation transporter/ATPase, N-terminus BN424_1364 PF00689 Cation transporting ATPase, C-terminus BN424_1367 PF00676 Dehydrogenase E1 component BN424_1368 PF02780 Transketolase, C-terminal domain BN424_1368 PF02779 Transketolase, pyrimidine binding domain BN424_1369 PF02817 e3 binding domain BN424_1369 PF00364 Biotin-requiring enzyme BN424_1369 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BN424_137 PF00689 Cation transporting ATPase, C-terminus BN424_137 PF00690 Cation transporter/ATPase, N-terminus BN424_1370 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_1370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_1371 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BN424_1371 PF00056 lactate/malate dehydrogenase, NAD binding domain BN424_1372 PF05256 Uncharacterised protein family (UPF0223) BN424_1373 PF00459 Inositol monophosphatase family BN424_1374 PF00459 Inositol monophosphatase family BN424_1375 PF00694 Aconitase C-terminal domain BN424_1375 PF00330 Aconitase family (aconitate hydratase) BN424_1376 PF00285 Citrate synthase, C-terminal domain BN424_1377 PF00180 Isocitrate/isopropylmalate dehydrogenase BN424_1380 PF07408 Protein of unknown function (DUF1507) BN424_1381 PF01098 Cell cycle protein BN424_1382 PF01098 Cell cycle protein BN424_1383 PF00682 HMGL-like BN424_1383 PF02436 Conserved carboxylase domain BN424_1383 PF00364 Biotin-requiring enzyme BN424_1383 PF02785 Biotin carboxylase C-terminal domain BN424_1383 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN424_1383 PF00289 Biotin carboxylase, N-terminal domain BN424_1384 PF14504 CAP-associated N-terminal BN424_1384 PF00188 Cysteine-rich secretory protein family BN424_1385 PF06133 Control of competence regulator ComK, YlbF/YmcA BN424_1386 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BN424_1389 PF01467 Cytidylyltransferase-like BN424_1390 PF05362 Lon protease (S16) C-terminal proteolytic domain BN424_1390 PF13180 PDZ domain BN424_1391 PF10531 SLBB domain BN424_1392 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN424_1394 PF00753 Metallo-beta-lactamase superfamily BN424_1394 PF13567 Domain of unknown function (DUF4131) BN424_1394 PF03772 Competence protein BN424_1395 PF00753 Metallo-beta-lactamase superfamily BN424_1395 PF03772 Competence protein BN424_1396 PF06144 DNA polymerase III, delta subunit BN424_1397 PF06144 DNA polymerase III, delta subunit BN424_1398 PF01649 Ribosomal protein S20 BN424_1399 PF03807 NADP oxidoreductase coenzyme F420-dependent BN424_1399 PF14748 Pyrroline-5-carboxylate reductase dimerisation BN424_1400 PF12344 Ultra-violet resistance protein B BN424_1400 PF17757 UvrB interaction domain BN424_1400 PF00271 Helicase conserved C-terminal domain BN424_1400 PF04851 Type III restriction enzyme, res subunit BN424_1400 PF02151 UvrB/uvrC motif BN424_1402 PF03611 PTS system sugar-specific permease component BN424_1403 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_1404 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_1405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BN424_1406 PF01261 Xylose isomerase-like TIM barrel BN424_1407 PF00596 Class II Aldolase and Adducin N-terminal domain BN424_141 PF00392 Bacterial regulatory proteins, gntR family BN424_141 PF07702 UTRA domain BN424_1410 PF00312 Ribosomal protein S15 BN424_1411 PF03725 3' exoribonuclease family, domain 2 BN424_1411 PF00575 S1 RNA binding domain BN424_1411 PF00013 KH domain BN424_1411 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BN424_1411 PF01138 3' exoribonuclease family, domain 1 BN424_1412 PF02237 Biotin protein ligase C terminal domain BN424_1412 PF03099 Biotin/lipoate A/B protein ligase family BN424_1412 PF08279 HTH domain BN424_1414 PF01118 Semialdehyde dehydrogenase, NAD binding domain BN424_1414 PF02774 Semialdehyde dehydrogenase, dimerisation domain BN424_1415 PF00701 Dihydrodipicolinate synthetase family BN424_1416 PF17770 Ribonuclease J C-terminal domain BN424_1416 PF00753 Metallo-beta-lactamase superfamily BN424_1416 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BN424_1417 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BN424_1418 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1419 PF00571 CBS domain BN424_1419 PF00005 ABC transporter BN424_142 PF00232 Glycosyl hydrolase family 1 BN424_1420 PF01966 HD domain BN424_1422 PF00072 Response regulator receiver domain BN424_1422 PF00486 Transcriptional regulatory protein, C terminal BN424_1423 PF00512 His Kinase A (phospho-acceptor) domain BN424_1423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_143 PF02378 Phosphotransferase system, EIIC BN424_1430 PF13556 PucR C-terminal helix-turn-helix domain BN424_1430 PF07905 Purine catabolism regulatory protein-like family BN424_1432 PF01979 Amidohydrolase family BN424_1435 PF00069 Protein kinase domain BN424_1435 PF03793 PASTA domain BN424_1437 PF00480 ROK family BN424_1438 PF07859 alpha/beta hydrolase fold BN424_1440 PF12833 Helix-turn-helix domain BN424_1440 PF02311 AraC-like ligand binding domain BN424_1442 PF09515 Thiamine transporter protein (Thia_YuaJ) BN424_1443 PF13396 Phospholipase_D-nuclease N-terminal BN424_1443 PF13091 PLD-like domain BN424_1444 PF00571 CBS domain BN424_1444 PF00005 ABC transporter BN424_1445 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1446 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BN424_1447 PF00528 Binding-protein-dependent transport system inner membrane component BN424_1449 PF02645 Uncharacterised protein, DegV family COG1307 BN424_1452 PF08340 Domain of unknown function (DUF1732) BN424_1452 PF03755 YicC-like family, N-terminal region BN424_1453 PF00625 Guanylate kinase BN424_1454 PF01192 RNA polymerase Rpb6 BN424_1455 PF02441 Flavoprotein BN424_1455 PF04127 DNA / pantothenate metabolism flavoprotein BN424_1456 PF04851 Type III restriction enzyme, res subunit BN424_1456 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BN424_1456 PF18074 Primosomal protein N C-terminal domain BN424_1456 PF17764 3′ DNA-binding domain (3′BD) BN424_1456 PF00271 Helicase conserved C-terminal domain BN424_1457 PF01327 Polypeptide deformylase BN424_1458 PF00551 Formyl transferase BN424_1458 PF02911 Formyl transferase, C-terminal domain BN424_1459 PF01189 16S rRNA methyltransferase RsmB/F BN424_1459 PF01029 NusB family BN424_146 PF02645 Uncharacterised protein, DegV family COG1307 BN424_1461 PF00069 Protein kinase domain BN424_1461 PF03793 PASTA domain BN424_1462 PF16745 RsgA N-terminal domain BN424_1462 PF03193 RsgA GTPase BN424_1463 PF00834 Ribulose-phosphate 3 epimerase family BN424_1464 PF04263 Thiamin pyrophosphokinase, catalytic domain BN424_1464 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BN424_1465 PF00830 Ribosomal L28 family BN424_1466 PF03780 Asp23 family, cell envelope-related function BN424_1467 PF13684 Dihydroxyacetone kinase family BN424_1467 PF02734 DAK2 domain BN424_1468 PF03315 Serine dehydratase beta chain BN424_1468 PF01842 ACT domain BN424_1469 PF03313 Serine dehydratase alpha chain BN424_1470 PF17191 RecG wedge domain BN424_1470 PF00271 Helicase conserved C-terminal domain BN424_1470 PF00270 DEAD/DEAH box helicase BN424_1471 PF02504 Fatty acid synthesis protein BN424_1472 PF00550 Phosphopantetheine attachment site BN424_1473 PF00035 Double-stranded RNA binding motif BN424_1473 PF14622 Ribonuclease-III-like BN424_1474 PF02463 RecF/RecN/SMC N terminal domain BN424_1474 PF06470 SMC proteins Flexible Hinge Domain BN424_1476 PF02881 SRP54-type protein, helical bundle domain BN424_1476 PF00448 SRP54-type protein, GTPase domain BN424_1477 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BN424_1478 PF00448 SRP54-type protein, GTPase domain BN424_1478 PF02881 SRP54-type protein, helical bundle domain BN424_1478 PF02978 Signal peptide binding domain BN424_1479 PF00886 Ribosomal protein S16 BN424_148 PF05738 Cna protein B-type domain BN424_148 PF17802 Prealbumin-like fold domain BN424_148 PF05737 Collagen binding domain BN424_1481 PF05239 PRC-barrel domain BN424_1481 PF01782 RimM N-terminal domain BN424_1482 PF01746 tRNA (Guanine-1)-methyltransferase BN424_1483 PF01245 Ribosomal protein L19 BN424_1484 PF14659 Phage integrase, N-terminal SAM-like domain BN424_1484 PF00589 Phage integrase family BN424_149 PF00293 NUDIX domain BN424_149 PF13344 Haloacid dehalogenase-like hydrolase BN424_1493 PF13411 MerR HTH family regulatory protein BN424_1495 PF00248 Aldo/keto reductase family BN424_1496 PF13411 MerR HTH family regulatory protein BN424_1497 PF00107 Zinc-binding dehydrogenase BN424_1497 PF08240 Alcohol dehydrogenase GroES-like domain BN424_1498 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_1498 PF03466 LysR substrate binding domain BN424_1504 PF04461 Protein of unknown function (DUF520) BN424_1505 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN424_1505 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BN424_1507 PF00326 Prolyl oligopeptidase family BN424_1508 PF01883 Iron-sulfur cluster assembly protein BN424_1509 PF01594 AI-2E family transporter BN424_151 PF00899 ThiF family BN424_1510 PF00582 Universal stress protein family BN424_1512 PF02861 Clp amino terminal domain, pathogenicity island component BN424_1512 PF10431 C-terminal, D2-small domain, of ClpB protein BN424_1512 PF17871 AAA lid domain BN424_1512 PF07724 AAA domain (Cdc48 subfamily) BN424_1512 PF00004 ATPase family associated with various cellular activities (AAA) BN424_1514 PF01336 OB-fold nucleic acid binding domain BN424_1514 PF02811 PHP domain BN424_1514 PF14579 Helix-hairpin-helix motif BN424_1514 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN424_1514 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN424_1515 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN424_1515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN424_1515 PF14579 Helix-hairpin-helix motif BN424_1515 PF01336 OB-fold nucleic acid binding domain BN424_1515 PF02811 PHP domain BN424_1516 PF00365 Phosphofructokinase BN424_1517 PF00391 PEP-utilising enzyme, mobile domain BN424_1517 PF00224 Pyruvate kinase, barrel domain BN424_1517 PF02887 Pyruvate kinase, alpha/beta domain BN424_1519 PF00072 Response regulator receiver domain BN424_1519 PF00486 Transcriptional regulatory protein, C terminal BN424_1520 PF04284 Protein of unknown function (DUF441) BN424_1521 PF13509 S1 domain BN424_1521 PF17783 CvfB-like winged helix domain BN424_1522 PF01475 Ferric uptake regulator family BN424_1523 PF02899 Phage integrase, N-terminal SAM-like domain BN424_1523 PF00589 Phage integrase family BN424_1524 PF01676 Metalloenzyme superfamily BN424_1525 PF01048 Phosphorylase superfamily BN424_1526 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BN424_1526 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BN424_1527 PF00583 Acetyltransferase (GNAT) family BN424_1528 PF02616 Segregation and condensation protein ScpA BN424_1529 PF04079 Segregation and condensation complex subunit ScpB BN424_153 PF00005 ABC transporter BN424_1530 PF00849 RNA pseudouridylate synthase BN424_1530 PF01479 S4 domain BN424_1531 PF00072 Response regulator receiver domain BN424_1531 PF00486 Transcriptional regulatory protein, C terminal BN424_1532 PF00672 HAMP domain BN424_1532 PF18698 Histidine kinase sensor domain BN424_1532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_1532 PF00512 His Kinase A (phospho-acceptor) domain BN424_1532 PF00989 PAS fold BN424_1533 PF12822 ECF transporter, substrate-specific component BN424_1536 PF00270 DEAD/DEAH box helicase BN424_1536 PF00271 Helicase conserved C-terminal domain BN424_1537 PF01476 LysM domain BN424_1537 PF08239 Bacterial SH3 domain BN424_1537 PF00877 NlpC/P60 family BN424_1538 PF02224 Cytidylate kinase BN424_1539 PF00575 S1 RNA binding domain BN424_1540 PF01926 50S ribosome-binding GTPase BN424_1540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BN424_1541 PF00216 Bacterial DNA-binding protein BN424_1542 PF01761 3-dehydroquinate synthase BN424_1544 PF08864 UPF0302 domain BN424_1544 PF08858 IDEAL domain BN424_1545 PF03819 MazG nucleotide pyrophosphohydrolase domain BN424_1546 PF01113 Dihydrodipicolinate reductase, N-terminus BN424_1546 PF05173 Dihydrodipicolinate reductase, C-terminus BN424_1547 PF01743 Poly A polymerase head domain BN424_1547 PF12627 Probable RNA and SrmB- binding site of polymerase A BN424_1547 PF13735 tRNA nucleotidyltransferase domain 2 putative BN424_1549 PF01022 Bacterial regulatory protein, arsR family BN424_155 PF00005 ABC transporter BN424_1551 PF01061 ABC-2 type transporter BN424_1552 PF00005 ABC transporter BN424_1554 PF01118 Semialdehyde dehydrogenase, NAD binding domain BN424_1554 PF02774 Semialdehyde dehydrogenase, dimerisation domain BN424_1555 PF01960 ArgJ family BN424_1556 PF00696 Amino acid kinase family BN424_1557 PF00202 Aminotransferase class-III BN424_1558 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN424_1558 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN424_1560 PF00929 Exonuclease BN424_1560 PF04851 Type III restriction enzyme, res subunit BN424_1560 PF13307 Helicase C-terminal domain BN424_1562 PF00155 Aminotransferase class I and II BN424_1563 PF01336 OB-fold nucleic acid binding domain BN424_1563 PF00152 tRNA synthetases class II (D, K and N) BN424_1564 PF07261 Replication initiation and membrane attachment BN424_1565 PF00730 HhH-GPD superfamily base excision DNA repair protein BN424_1565 PF00633 Helix-hairpin-helix motif BN424_1565 PF10576 Iron-sulfur binding domain of endonuclease III BN424_1566 PF00912 Transglycosylase BN424_1566 PF00905 Penicillin binding protein transpeptidase domain BN424_1567 PF03838 Recombination protein U BN424_1568 PF06908 YspA SLOG family BN424_1569 PF05103 DivIVA protein BN424_157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_157 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BN424_157 PF17203 Single cache domain 3 BN424_157 PF00989 PAS fold BN424_1570 PF01170 Putative RNA methylase family UPF0020 BN424_1570 PF02926 THUMP domain BN424_1571 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BN424_1573 PF00075 RNase H BN424_1576 PF00313 'Cold-shock' DNA-binding domain BN424_1577 PF01268 Formate--tetrahydrofolate ligase BN424_1578 PF13411 MerR HTH family regulatory protein BN424_158 PF04397 LytTr DNA-binding domain BN424_158 PF00072 Response regulator receiver domain BN424_1583 PF12848 ABC transporter BN424_1583 PF16326 ABC transporter C-terminal domain BN424_1583 PF00005 ABC transporter BN424_1584 PF00303 Thymidylate synthase BN424_1585 PF00186 Dihydrofolate reductase BN424_1586 PF03006 Haemolysin-III related BN424_1587 PF02645 Uncharacterised protein, DegV family COG1307 BN424_1588 PF13472 GDSL-like Lipase/Acylhydrolase family BN424_1590 PF01625 Peptide methionine sulfoxide reductase BN424_1591 PF06855 YozE SAM-like fold BN424_1592 PF01048 Phosphorylase superfamily BN424_1593 PF17820 PDZ domain BN424_1593 PF03572 Peptidase family S41 BN424_1593 PF01471 Putative peptidoglycan binding domain BN424_1594 PF10502 Signal peptidase, peptidase S26 BN424_1595 PF10502 Signal peptidase, peptidase S26 BN424_1596 PF01926 50S ribosome-binding GTPase BN424_1597 PF01351 Ribonuclease HII BN424_1598 PF18255 DNA processing protein A sterile alpha motif domain BN424_1598 PF02481 DNA recombination-mediator protein A BN424_1599 PF01751 Toprim domain BN424_1599 PF01131 DNA topoisomerase BN424_1599 PF01396 Topoisomerase DNA binding C4 zinc finger BN424_16 PF00665 Integrase core domain BN424_16 PF13276 HTH-like domain BN424_160 PF02567 Phenazine biosynthesis-like protein BN424_1600 PF01134 Glucose inhibited division protein A BN424_1601 PF00589 Phage integrase family BN424_1601 PF02899 Phage integrase, N-terminal SAM-like domain BN424_1602 PF00227 Proteasome subunit BN424_1603 PF10431 C-terminal, D2-small domain, of ClpB protein BN424_1603 PF00004 ATPase family associated with various cellular activities (AAA) BN424_1603 PF07724 AAA domain (Cdc48 subfamily) BN424_1606 PF02660 Glycerol-3-phosphate acyltransferase BN424_1607 PF00986 DNA gyrase B subunit, carboxyl terminus BN424_1607 PF00204 DNA gyrase B BN424_1607 PF01751 Toprim domain BN424_1607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_1608 PF00521 DNA gyrase/topoisomerase IV, subunit A BN424_1608 PF03989 DNA gyrase C-terminal domain, beta-propeller BN424_1609 PF02901 Pyruvate formate lyase-like BN424_1609 PF01228 Glycine radical BN424_1610 PF04055 Radical SAM superfamily BN424_1611 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_1611 PF03466 LysR substrate binding domain BN424_1613 PF02833 DHHA2 domain BN424_1613 PF01368 DHH family BN424_1614 PF13492 GAF domain BN424_1614 PF07694 5TMR of 5TMR-LYT BN424_1614 PF06580 Histidine kinase BN424_1614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_1615 PF04397 LytTr DNA-binding domain BN424_1615 PF00072 Response regulator receiver domain BN424_1616 PF03788 LrgA family BN424_1618 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BN424_1620 PF00872 Transposase, Mutator family BN424_1628 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_1628 PF05043 Mga helix-turn-helix domain BN424_1628 PF08270 M protein trans-acting positive regulator (MGA) PRD domain BN424_163 PF00512 His Kinase A (phospho-acceptor) domain BN424_163 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_163 PF00672 HAMP domain BN424_1630 PF01813 ATP synthase subunit D BN424_1631 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN424_1631 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN424_1632 PF16886 ATPsynthase alpha/beta subunit N-term extension BN424_1632 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN424_1632 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN424_1633 PF01990 ATP synthase (F/14-kDa) subunit BN424_1634 PF01992 ATP synthase (C/AC39) subunit BN424_1636 PF00137 ATP synthase subunit C BN424_1637 PF01496 V-type ATPase 116kDa subunit family BN424_164 PF00486 Transcriptional regulatory protein, C terminal BN424_164 PF00072 Response regulator receiver domain BN424_1641 PF01740 STAS domain BN424_1641 PF00916 Sulfate permease family BN424_1645 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_1645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_1646 PF01758 Sodium Bile acid symporter family BN424_1647 PF01022 Bacterial regulatory protein, arsR family BN424_1649 PF13673 Acetyltransferase (GNAT) domain BN424_165 PF00005 ABC transporter BN424_165 PF12704 MacB-like periplasmic core domain BN424_165 PF02687 FtsX-like permease family BN424_1650 PF01047 MarR family BN424_1651 PF11798 IMS family HHH motif BN424_1651 PF11799 impB/mucB/samB family C-terminal domain BN424_1651 PF00817 impB/mucB/samB family BN424_1652 PF11798 IMS family HHH motif BN424_1652 PF11799 impB/mucB/samB family C-terminal domain BN424_1652 PF00817 impB/mucB/samB family BN424_1658 PF01566 Natural resistance-associated macrophage protein BN424_1659 PF04439 Streptomycin adenylyltransferase BN424_1661 PF12822 ECF transporter, substrate-specific component BN424_1664 PF00857 Isochorismatase family BN424_1667 PF03816 Cell envelope-related transcriptional attenuator domain BN424_167 PF09962 Uncharacterized conserved protein (DUF2196) BN424_1671 PF00005 ABC transporter BN424_1672 PF02653 Branched-chain amino acid transport system / permease component BN424_1675 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BN424_1679 PF00290 Tryptophan synthase alpha chain BN424_168 PF07308 Protein of unknown function (DUF1456) BN424_1680 PF00291 Pyridoxal-phosphate dependent enzyme BN424_1681 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BN424_1682 PF00218 Indole-3-glycerol phosphate synthase BN424_1683 PF02885 Glycosyl transferase family, helical bundle domain BN424_1683 PF00591 Glycosyl transferase family, a/b domain BN424_1684 PF00117 Glutamine amidotransferase class-I BN424_1685 PF04715 Anthranilate synthase component I, N terminal region BN424_1685 PF00425 chorismate binding enzyme BN424_1687 PF00194 Eukaryotic-type carbonic anhydrase BN424_1688 PF01425 Amidase BN424_1692 PF08713 DNA alkylation repair enzyme BN424_1696 PF00183 Hsp90 protein BN424_1697 PF03009 Glycerophosphoryl diester phosphodiesterase family BN424_1699 PF02535 ZIP Zinc transporter BN424_1700 PF00005 ABC transporter BN424_1701 PF01032 FecCD transport family BN424_1702 PF01032 FecCD transport family BN424_1703 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_1704 PF01497 Periplasmic binding protein BN424_1705 PF01497 Periplasmic binding protein BN424_1706 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BN424_1709 PF00285 Citrate synthase, C-terminal domain BN424_1710 PF00156 Phosphoribosyl transferase domain BN424_1711 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BN424_1712 PF01180 Dihydroorotate dehydrogenase BN424_1713 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BN424_1713 PF00970 Oxidoreductase FAD-binding domain BN424_1714 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BN424_1714 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN424_1714 PF02142 MGS-like domain BN424_1715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BN424_1715 PF00117 Glutamine amidotransferase class-I BN424_1716 PF01979 Amidohydrolase family BN424_1717 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN424_1717 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN424_1718 PF00860 Permease family BN424_1719 PF00156 Phosphoribosyl transferase domain BN424_1720 PF01479 S4 domain BN424_1720 PF00849 RNA pseudouridylate synthase BN424_1721 PF01252 Signal peptidase (SPase) II BN424_1723 PF00266 Aminotransferase class-V BN424_1724 PF13556 PucR C-terminal helix-turn-helix domain BN424_1724 PF17853 GGDEF-like domain BN424_1724 PF07905 Purine catabolism regulatory protein-like family BN424_1725 PF00696 Amino acid kinase family BN424_1728 PF06545 Protein of unknown function (DUF1116) BN424_1729 PF02629 CoA binding domain BN424_1729 PF00549 CoA-ligase BN424_173 PF13673 Acetyltransferase (GNAT) domain BN424_173 PF13302 Acetyltransferase (GNAT) domain BN424_173 PF00958 GMP synthase C terminal domain BN424_173 PF03352 Methyladenine glycosylase BN424_173 PF00117 Glutamine amidotransferase class-I BN424_1730 PF02615 Malate/L-lactate dehydrogenase BN424_1731 PF02615 Malate/L-lactate dehydrogenase BN424_1732 PF07883 Cupin domain BN424_1732 PF05899 Protein of unknown function (DUF861) BN424_1734 PF01546 Peptidase family M20/M25/M40 BN424_1736 PF00854 POT family BN424_1739 PF13529 Peptidase_C39 like family BN424_1740 PF12705 PD-(D/E)XK nuclease superfamily BN424_1740 PF00580 UvrD/REP helicase N-terminal domain BN424_1740 PF13361 UvrD-like helicase C-terminal domain BN424_1741 PF12705 PD-(D/E)XK nuclease superfamily BN424_1742 PF03575 Peptidase family S51 BN424_1743 PF03575 Peptidase family S51 BN424_1746 PF07687 Peptidase dimerisation domain BN424_1746 PF01546 Peptidase family M20/M25/M40 BN424_1747 PF01784 NIF3 (NGG1p interacting factor 3) BN424_1748 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BN424_1749 PF01476 LysM domain BN424_1749 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BN424_175 PF08903 Domain of unknown function (DUF1846) BN424_1754 PF03979 Sigma-70 factor, region 1.1 BN424_1754 PF00140 Sigma-70 factor, region 1.2 BN424_1754 PF04545 Sigma-70, region 4 BN424_1754 PF04542 Sigma-70 region 2 BN424_1754 PF04539 Sigma-70 region 3 BN424_1755 PF08275 DNA primase catalytic core, N-terminal domain BN424_1755 PF01807 CHC2 zinc finger BN424_1755 PF10410 DnaB-helicase binding domain of primase BN424_1756 PF00005 ABC transporter BN424_1756 PF00664 ABC transporter transmembrane region BN424_1758 PF05746 DALR anticodon binding domain BN424_1758 PF02092 Glycyl-tRNA synthetase beta subunit BN424_1759 PF02091 Glycyl-tRNA synthetase alpha subunit BN424_176 PF00326 Prolyl oligopeptidase family BN424_1760 PF04203 Sortase domain BN424_1762 PF02565 Recombination protein O C terminal BN424_1762 PF11967 Recombination protein O N terminal BN424_1763 PF07650 KH domain BN424_1763 PF01926 50S ribosome-binding GTPase BN424_1764 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN424_1765 PF01219 Prokaryotic diacylglycerol kinase BN424_1766 PF02130 Uncharacterized protein family UPF0054 BN424_1767 PF01966 HD domain BN424_1767 PF07697 7TM-HD extracellular BN424_1767 PF07698 7TM receptor with intracellular HD hydrolase BN424_1768 PF02562 PhoH-like protein BN424_1771 PF09424 Yqey-like protein BN424_1772 PF01165 Ribosomal protein S21 BN424_1773 PF01475 Ferric uptake regulator family BN424_1774 PF08279 HTH domain BN424_1774 PF00571 CBS domain BN424_1775 PF03618 Kinase/pyrophosphorylase BN424_1776 PF03618 Kinase/pyrophosphorylase BN424_1777 PF03143 Elongation factor Tu C-terminal domain BN424_1777 PF03144 Elongation factor Tu domain 2 BN424_1777 PF00009 Elongation factor Tu GTP binding domain BN424_1778 PF00009 Elongation factor Tu GTP binding domain BN424_1778 PF03144 Elongation factor Tu domain 2 BN424_1778 PF03143 Elongation factor Tu C-terminal domain BN424_1779 PF14492 Elongation Factor G, domain II BN424_1779 PF00679 Elongation factor G C-terminus BN424_1779 PF03764 Elongation factor G, domain IV BN424_1779 PF00009 Elongation factor Tu GTP binding domain BN424_1779 PF03144 Elongation factor Tu domain 2 BN424_1780 PF00177 Ribosomal protein S7p/S5e BN424_1781 PF00164 Ribosomal protein S12/S23 BN424_1784 PF04011 LemA family BN424_1785 PF06146 Phosphate-starvation-inducible E BN424_1786 PF00486 Transcriptional regulatory protein, C terminal BN424_1786 PF00072 Response regulator receiver domain BN424_1787 PF00005 ABC transporter BN424_1789 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_1789 PF00512 His Kinase A (phospho-acceptor) domain BN424_1791 PF01261 Xylose isomerase-like TIM barrel BN424_1792 PF00881 Nitroreductase family BN424_1793 PF06271 RDD family BN424_1794 PF01343 Peptidase family S49 BN424_1795 PF01336 OB-fold nucleic acid binding domain BN424_1795 PF02938 GAD domain BN424_1795 PF00152 tRNA synthetases class II (D, K and N) BN424_1796 PF13393 Histidyl-tRNA synthetase BN424_1796 PF03129 Anticodon binding domain BN424_1797 PF01520 N-acetylmuramoyl-L-alanine amidase BN424_1797 PF08239 Bacterial SH3 domain BN424_1798 PF02580 D-Tyr-tRNA(Tyr) deacylase BN424_1799 PF13291 ACT domain BN424_1799 PF04607 Region found in RelA / SpoT proteins BN424_1799 PF02824 TGS domain BN424_18 PF01370 NAD dependent epimerase/dehydratase family BN424_180 PF06177 QueT transporter BN424_1802 PF01551 Peptidase family M23 BN424_1802 PF01476 LysM domain BN424_1803 PF01791 DeoC/LacD family aldolase BN424_1804 PF04452 RNA methyltransferase BN424_1807 PF02245 Methylpurine-DNA glycosylase (MPG) BN424_1809 PF08125 Mannitol dehydrogenase C-terminal domain BN424_1809 PF01232 Mannitol dehydrogenase Rossmann domain BN424_181 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BN424_181 PF14572 Phosphoribosyl synthetase-associated domain BN424_1810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_1811 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_1811 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_1811 PF08279 HTH domain BN424_1811 PF00874 PRD domain BN424_1811 PF05043 Mga helix-turn-helix domain BN424_1812 PF02378 Phosphotransferase system, EIIC BN424_1812 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_182 PF03180 NLPA lipoprotein BN424_1820 PF05857 TraX protein BN424_1826 PF02899 Phage integrase, N-terminal SAM-like domain BN424_1826 PF00589 Phage integrase family BN424_1829 PF01510 N-acetylmuramoyl-L-alanine amidase BN424_1829 PF01473 Putative cell wall binding repeat BN424_184 PF01116 Fructose-bisphosphate aldolase class-II BN424_185 PF01479 S4 domain BN424_185 PF00849 RNA pseudouridylate synthase BN424_1855 PF04233 Phage Mu protein F like protein BN424_186 PF01546 Peptidase family M20/M25/M40 BN424_186 PF07687 Peptidase dimerisation domain BN424_1871 PF12961 Domain of unknown function (DUF3850) BN424_188 PF08274 PhnA Zinc-Ribbon BN424_188 PF03831 PhnA domain BN424_1894 PF00589 Phage integrase family BN424_1894 PF02899 Phage integrase, N-terminal SAM-like domain BN424_1895 PF03144 Elongation factor Tu domain 2 BN424_1895 PF00009 Elongation factor Tu GTP binding domain BN424_1895 PF00679 Elongation factor G C-terminus BN424_1895 PF06421 GTP-binding protein LepA C-terminus BN424_1896 PF00226 DnaJ domain BN424_1896 PF00684 DnaJ central domain BN424_1896 PF01556 DnaJ C terminal domain BN424_1897 PF00012 Hsp70 protein BN424_1898 PF01025 GrpE BN424_1899 PF01628 HrcA protein C terminal domain BN424_1899 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BN424_19 PF00534 Glycosyl transferases group 1 BN424_19 PF13439 Glycosyltransferase Family 4 BN424_190 PF00149 Calcineurin-like phosphoesterase BN424_190 PF02872 5'-nucleotidase, C-terminal domain BN424_1900 PF00293 NUDIX domain BN424_1902 PF14698 Argininosuccinate lyase C-terminal BN424_1902 PF00206 Lyase BN424_1903 PF00764 Arginosuccinate synthase BN424_1905 PF06969 HemN C-terminal domain BN424_1905 PF04055 Radical SAM superfamily BN424_1906 PF01687 Riboflavin kinase BN424_1906 PF06574 FAD synthetase BN424_1907 PF16198 tRNA pseudouridylate synthase B C-terminal domain BN424_1907 PF01509 TruB family pseudouridylate synthase (N terminal domain) BN424_1908 PF02645 Uncharacterised protein, DegV family COG1307 BN424_1909 PF00781 Diacylglycerol kinase catalytic domain BN424_191 PF07694 5TMR of 5TMR-LYT BN424_191 PF00990 Diguanylate cyclase, GGDEF domain BN424_1915 PF02033 Ribosome-binding factor A BN424_1916 PF04760 Translation initiation factor IF-2, N-terminal region BN424_1916 PF00009 Elongation factor Tu GTP binding domain BN424_1916 PF11987 Translation-initiation factor 2 BN424_1917 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BN424_1918 PF04296 Protein of unknown function (DUF448) BN424_1919 PF13184 NusA-like KH domain BN424_1919 PF00575 S1 RNA binding domain BN424_1919 PF08529 NusA N-terminal domain BN424_192 PF01380 SIS domain BN424_192 PF01418 Helix-turn-helix domain, rpiR family BN424_1920 PF17384 RimP C-terminal SH3 domain BN424_1920 PF02576 RimP N-terminal domain BN424_1922 PF11490 DNA polymerase III polC-type N-terminus II BN424_1922 PF02811 PHP domain BN424_1922 PF14579 Helix-hairpin-helix motif BN424_1922 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN424_1922 PF14480 DNA polymerase III polC-type N-terminus I BN424_1922 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN424_1922 PF00929 Exonuclease BN424_1923 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN424_1923 PF04073 Aminoacyl-tRNA editing domain BN424_1923 PF03129 Anticodon binding domain BN424_1924 PF02163 Peptidase family M50 BN424_1924 PF17820 PDZ domain BN424_1925 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BN424_1925 PF13288 DXP reductoisomerase C-terminal domain BN424_1925 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BN424_1928 PF01255 Putative undecaprenyl diphosphate synthase BN424_193 PF02378 Phosphotransferase system, EIIC BN424_1930 PF01765 Ribosome recycling factor BN424_1931 PF00696 Amino acid kinase family BN424_1932 PF00889 Elongation factor TS BN424_1933 PF00318 Ribosomal protein S2 BN424_1935 PF01546 Peptidase family M20/M25/M40 BN424_1935 PF07687 Peptidase dimerisation domain BN424_1936 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_1939 PF00271 Helicase conserved C-terminal domain BN424_1939 PF00176 SNF2 family N-terminal domain BN424_1939 PF04434 SWIM zinc finger BN424_194 PF00232 Glycosyl hydrolase family 1 BN424_1941 PF13476 AAA domain BN424_1942 PF13476 AAA domain BN424_1943 PF00149 Calcineurin-like phosphoesterase BN424_1944 PF01553 Acyltransferase BN424_1945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN424_1946 PF00005 ABC transporter BN424_1946 PF00664 ABC transporter transmembrane region BN424_1947 PF00005 ABC transporter BN424_1947 PF00664 ABC transporter transmembrane region BN424_1948 PF03672 Uncharacterised protein family (UPF0154) BN424_1949 PF00456 Transketolase, thiamine diphosphate binding domain BN424_1949 PF02780 Transketolase, C-terminal domain BN424_1949 PF02779 Transketolase, pyrimidine binding domain BN424_195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_1950 PF05979 Bacterial protein of unknown function (DUF896) BN424_1951 PF01726 LexA DNA binding domain BN424_1951 PF00717 Peptidase S24-like BN424_1954 PF04791 LMBR1-like membrane protein BN424_1956 PF00156 Phosphoribosyl transferase domain BN424_1957 PF17768 RecJ OB domain BN424_1957 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BN424_1957 PF01368 DHH family BN424_1957 PF02272 DHHA1 domain BN424_1958 PF13673 Acetyltransferase (GNAT) domain BN424_196 PF01979 Amidohydrolase family BN424_1960 PF06305 Lipopolysaccharide assembly protein A domain BN424_1961 PF00106 short chain dehydrogenase BN424_1962 PF12706 Beta-lactamase superfamily domain BN424_1962 PF00753 Metallo-beta-lactamase superfamily BN424_1963 PF01757 Acyltransferase family BN424_1964 PF01926 50S ribosome-binding GTPase BN424_1964 PF01018 GTP1/OBG BN424_1964 PF09269 Domain of unknown function (DUF1967) BN424_1965 PF04794 YdjC-like protein BN424_1968 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BN424_197 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BN424_1970 PF02583 Metal-sensitive transcriptional repressor BN424_1971 PF01206 Sulfurtransferase TusA BN424_1971 PF00581 Rhodanese-like domain BN424_1972 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_1972 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_1973 PF00581 Rhodanese-like domain BN424_1974 PF13732 Domain of unknown function (DUF4162) BN424_1974 PF00005 ABC transporter BN424_1976 PF00154 recA bacterial DNA recombination protein BN424_1977 PF02082 Transcriptional regulator BN424_1979 PF08220 DeoR-like helix-turn-helix domain BN424_1979 PF00455 DeoR C terminal sensor domain BN424_1980 PF00294 pfkB family carbohydrate kinase BN424_1981 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_1981 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_1984 PF00005 ABC transporter BN424_1984 PF13732 Domain of unknown function (DUF4162) BN424_1985 PF00155 Aminotransferase class I and II BN424_1987 PF00005 ABC transporter BN424_1988 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_1989 PF00403 Heavy-metal-associated domain BN424_199 PF00571 CBS domain BN424_199 PF00478 IMP dehydrogenase / GMP reductase domain BN424_1990 PF03965 Penicillinase repressor BN424_1994 PF00202 Aminotransferase class-III BN424_1995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BN424_1995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BN424_1995 PF01488 Shikimate / quinate 5-dehydrogenase BN424_1996 PF01926 50S ribosome-binding GTPase BN424_2 PF02768 DNA polymerase III beta subunit, C-terminal domain BN424_2 PF02767 DNA polymerase III beta subunit, central domain BN424_2 PF00712 DNA polymerase III beta subunit, N-terminal domain BN424_20 PF03808 Glycosyl transferase WecB/TagA/CpsF family BN424_2006 PF10431 C-terminal, D2-small domain, of ClpB protein BN424_2006 PF07724 AAA domain (Cdc48 subfamily) BN424_2006 PF06689 ClpX C4-type zinc finger BN424_2007 PF04545 Sigma-70, region 4 BN424_2007 PF04539 Sigma-70 region 3 BN424_2007 PF04542 Sigma-70 region 2 BN424_2007 PF00140 Sigma-70 factor, region 1.2 BN424_2007 PF03979 Sigma-70 factor, region 1.1 BN424_2009 PF05698 Bacterial trigger factor protein (TF) C-terminus BN424_2009 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BN424_2009 PF05697 Bacterial trigger factor protein (TF) BN424_2012 PF07664 Ferrous iron transport protein B C terminus BN424_2012 PF07670 Nucleoside recognition BN424_2012 PF02421 Ferrous iron transport protein B BN424_2012 PF17910 FeoB cytosolic helical domain BN424_2015 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BN424_2016 PF01039 Carboxyl transferase domain BN424_2017 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN424_2017 PF00289 Biotin carboxylase, N-terminal domain BN424_2017 PF02785 Biotin carboxylase C-terminal domain BN424_2018 PF07977 FabA-like domain BN424_2019 PF00364 Biotin-requiring enzyme BN424_2020 PF02801 Beta-ketoacyl synthase, C-terminal domain BN424_2020 PF00109 Beta-ketoacyl synthase, N-terminal domain BN424_2022 PF00698 Acyl transferase domain BN424_2023 PF03060 Nitronate monooxygenase BN424_2024 PF00550 Phosphopantetheine attachment site BN424_2025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BN424_2025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BN424_2026 PF01047 MarR family BN424_2028 PF00072 Response regulator receiver domain BN424_2028 PF00486 Transcriptional regulatory protein, C terminal BN424_2029 PF00672 HAMP domain BN424_2029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2029 PF00512 His Kinase A (phospho-acceptor) domain BN424_2030 PF02687 FtsX-like permease family BN424_2031 PF00005 ABC transporter BN424_2032 PF00488 MutS domain V BN424_2032 PF01713 Smr domain BN424_2037 PF03951 Glutamine synthetase, beta-Grasp domain BN424_2037 PF00120 Glutamine synthetase, catalytic domain BN424_2038 PF13411 MerR HTH family regulatory protein BN424_2039 PF06838 Methionine gamma-lyase BN424_2042 PF03009 Glycerophosphoryl diester phosphodiesterase family BN424_2043 PF12728 Helix-turn-helix domain BN424_2044 PF00581 Rhodanese-like domain BN424_2046 PF00480 ROK family BN424_2047 PF00480 ROK family BN424_2049 PF01694 Rhomboid family BN424_2050 PF01812 5-formyltetrahydrofolate cyclo-ligase family BN424_2051 PF00471 Ribosomal protein L33 BN424_2056 PF09586 Bacterial membrane protein YfhO BN424_2058 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BN424_2058 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BN424_2063 PF00271 Helicase conserved C-terminal domain BN424_2063 PF00270 DEAD/DEAH box helicase BN424_2064 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BN424_2064 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BN424_2067 PF02272 DHHA1 domain BN424_2067 PF01368 DHH family BN424_2068 PF00392 Bacterial regulatory proteins, gntR family BN424_2068 PF07085 DRTGG domain BN424_2068 PF00571 CBS domain BN424_2068 PF03061 Thioesterase superfamily BN424_207 PF08270 M protein trans-acting positive regulator (MGA) PRD domain BN424_207 PF05043 Mga helix-turn-helix domain BN424_207 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_2070 PF00817 impB/mucB/samB family BN424_2070 PF11799 impB/mucB/samB family C-terminal domain BN424_2070 PF11798 IMS family HHH motif BN424_2071 PF01325 Iron dependent repressor, N-terminal DNA binding domain BN424_2071 PF02742 Iron dependent repressor, metal binding and dimerisation domain BN424_2072 PF00171 Aldehyde dehydrogenase family BN424_2072 PF00465 Iron-containing alcohol dehydrogenase BN424_2074 PF03706 Lysylphosphatidylglycerol synthase TM region BN424_2074 PF09924 Uncharacterised conserved protein (DUF2156) BN424_2075 PF02699 Preprotein translocase subunit BN424_2076 PF01702 Queuine tRNA-ribosyltransferase BN424_2077 PF00440 Bacterial regulatory proteins, tetR family BN424_2078 PF02547 Queuosine biosynthesis protein BN424_2079 PF05496 Holliday junction DNA helicase RuvB P-loop domain BN424_2079 PF05491 RuvB C-terminal winged helix domain BN424_2079 PF17864 RuvB AAA lid domain BN424_2080 PF01330 RuvA N terminal domain BN424_2080 PF07499 RuvA, C-terminal domain BN424_2084 PF00933 Glycosyl hydrolase family 3 N terminal domain BN424_2085 PF01641 SelR domain BN424_2089 PF08676 MutL C terminal dimerisation domain BN424_2089 PF01119 DNA mismatch repair protein, C-terminal domain BN424_209 PF02875 Mur ligase family, glutamate ligase domain BN424_209 PF08245 Mur ligase middle domain BN424_2090 PF01624 MutS domain I BN424_2090 PF00488 MutS domain V BN424_2090 PF05192 MutS domain III BN424_2090 PF05190 MutS family domain IV BN424_2090 PF05188 MutS domain II BN424_2092 PF13277 YmdB-like protein BN424_2093 PF01966 HD domain BN424_2093 PF12072 Domain of unknown function (DUF3552) BN424_2093 PF00013 KH domain BN424_2094 PF00154 recA bacterial DNA recombination protein BN424_2097 PF02464 Competence-damaged protein BN424_2097 PF00994 Probable molybdopterin binding domain BN424_2097 PF18146 Damage-inducible protein CinA KH domain BN424_2099 PF01066 CDP-alcohol phosphatidyltransferase BN424_21 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_21 PF05043 Mga helix-turn-helix domain BN424_21 PF08270 M protein trans-acting positive regulator (MGA) PRD domain BN424_210 PF00486 Transcriptional regulatory protein, C terminal BN424_210 PF00072 Response regulator receiver domain BN424_2100 PF00999 Sodium/hydrogen exchanger family BN424_2101 PF13464 Domain of unknown function (DUF4115) BN424_2103 PF00675 Insulinase (Peptidase family M16) BN424_2103 PF05193 Peptidase M16 inactive domain BN424_2104 PF05193 Peptidase M16 inactive domain BN424_2108 PF04343 Protein of unknown function, DUF488 BN424_2109 PF02608 ABC transporter substrate-binding protein PnrA-like BN424_211 PF00512 His Kinase A (phospho-acceptor) domain BN424_211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2110 PF01580 FtsK/SpoIIIE family BN424_2110 PF09397 Ftsk gamma domain BN424_2110 PF17854 FtsK alpha domain BN424_2112 PF01751 Toprim domain BN424_2112 PF01131 DNA topoisomerase BN424_2113 PF01131 DNA topoisomerase BN424_2113 PF01751 Toprim domain BN424_2115 PF00708 Acylphosphatase BN424_2116 PF02096 60Kd inner membrane protein BN424_2117 PF00512 His Kinase A (phospho-acceptor) domain BN424_2117 PF18719 ArlS sensor domain BN424_2117 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2118 PF00486 Transcriptional regulatory protein, C terminal BN424_2118 PF00072 Response regulator receiver domain BN424_212 PF07943 Penicillin-binding protein 5, C-terminal domain BN424_212 PF00768 D-alanyl-D-alanine carboxypeptidase BN424_2120 PF01473 Putative cell wall binding repeat BN424_2120 PF01510 N-acetylmuramoyl-L-alanine amidase BN424_2129 PF01183 Glycosyl hydrolases family 25 BN424_214 PF00690 Cation transporter/ATPase, N-terminus BN424_214 PF00689 Cation transporting ATPase, C-terminus BN424_2141 PF14550 Putative phage serine protease XkdF BN424_2144 PF04860 Phage portal protein BN424_215 PF02403 Seryl-tRNA synthetase N-terminal domain BN424_215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN424_2153 PF12961 Domain of unknown function (DUF3850) BN424_216 PF01625 Peptide methionine sulfoxide reductase BN424_2178 PF02899 Phage integrase, N-terminal SAM-like domain BN424_2178 PF00589 Phage integrase family BN424_2179 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN424_2179 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BN424_2180 PF07687 Peptidase dimerisation domain BN424_2180 PF01546 Peptidase family M20/M25/M40 BN424_2183 PF02687 FtsX-like permease family BN424_2183 PF12704 MacB-like periplasmic core domain BN424_2183 PF00005 ABC transporter BN424_2184 PF12704 MacB-like periplasmic core domain BN424_2184 PF02687 FtsX-like permease family BN424_2184 PF00005 ABC transporter BN424_2186 PF13476 AAA domain BN424_2187 PF02863 Arginine repressor, C-terminal domain BN424_2187 PF01316 Arginine repressor, DNA binding domain BN424_2189 PF01728 FtsJ-like methyltransferase BN424_2189 PF01479 S4 domain BN424_2190 PF00348 Polyprenyl synthetase BN424_2191 PF02609 Exonuclease VII small subunit BN424_2192 PF02601 Exonuclease VII, large subunit BN424_2192 PF13742 OB-fold nucleic acid binding domain BN424_2193 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BN424_2193 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BN424_2194 PF01029 NusB family BN424_2195 PF03780 Asp23 family, cell envelope-related function BN424_2196 PF01132 Elongation factor P (EF-P) OB domain BN424_2196 PF09285 Elongation factor P, C-terminal BN424_2196 PF08207 Elongation factor P (EF-P) KOW-like domain BN424_2197 PF00557 Metallopeptidase family M24 BN424_2197 PF01321 Creatinase/Prolidase N-terminal domain BN424_2202 PF07963 Prokaryotic N-terminal methylation motif BN424_2204 PF00437 Type II/IV secretion system protein BN424_2205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_2205 PF03466 LysR substrate binding domain BN424_2206 PF03601 Conserved hypothetical protein 698 BN424_2207 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN424_2207 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BN424_2211 PF01709 Transcriptional regulator BN424_2212 PF01872 RibD C-terminal domain BN424_2216 PF01476 LysM domain BN424_2216 PF00877 NlpC/P60 family BN424_2216 PF08239 Bacterial SH3 domain BN424_2217 PF03352 Methyladenine glycosylase BN424_2217 PF13673 Acetyltransferase (GNAT) domain BN424_2217 PF00958 GMP synthase C terminal domain BN424_2217 PF00117 Glutamine amidotransferase class-I BN424_2217 PF13302 Acetyltransferase (GNAT) domain BN424_2219 PF00005 ABC transporter BN424_2220 PF02653 Branched-chain amino acid transport system / permease component BN424_2223 PF00905 Penicillin binding protein transpeptidase domain BN424_2223 PF00912 Transglycosylase BN424_2224 PF00356 Bacterial regulatory proteins, lacI family BN424_2226 PF01321 Creatinase/Prolidase N-terminal domain BN424_2226 PF00557 Metallopeptidase family M24 BN424_2228 PF00924 Mechanosensitive ion channel BN424_2230 PF01546 Peptidase family M20/M25/M40 BN424_2230 PF07687 Peptidase dimerisation domain BN424_2231 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BN424_2231 PF00132 Bacterial transferase hexapeptide (six repeats) BN424_2231 PF14602 Hexapeptide repeat of succinyl-transferase BN424_2237 PF01138 3' exoribonuclease family, domain 1 BN424_2237 PF03725 3' exoribonuclease family, domain 2 BN424_2238 PF01177 Asp/Glu/Hydantoin racemase BN424_2239 PF10702 Protein of unknown function (DUF2507) BN424_2241 PF13732 Domain of unknown function (DUF4162) BN424_2241 PF00005 ABC transporter BN424_2242 PF04914 DltD protein BN424_2243 PF00550 Phosphopantetheine attachment site BN424_2244 PF03062 MBOAT, membrane-bound O-acyltransferase family BN424_2245 PF13193 AMP-binding enzyme C-terminal domain BN424_2245 PF00501 AMP-binding enzyme BN424_2247 PF08459 UvrC Helix-hairpin-helix N-terminal BN424_2247 PF01541 GIY-YIG catalytic domain BN424_2247 PF02151 UvrB/uvrC motif BN424_2252 PF00561 alpha/beta hydrolase fold BN424_2253 PF00085 Thioredoxin BN424_2254 PF00488 MutS domain V BN424_2254 PF01713 Smr domain BN424_2256 PF02674 Colicin V production protein BN424_2258 PF11858 Domain of unknown function (DUF3378) BN424_2258 PF01351 Ribonuclease HII BN424_2259 PF13520 Amino acid permease BN424_2260 PF00561 alpha/beta hydrolase fold BN424_2261 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BN424_2261 PF01588 Putative tRNA binding domain BN424_2261 PF03147 Ferredoxin-fold anticodon binding domain BN424_2261 PF03483 B3/4 domain BN424_2261 PF03484 tRNA synthetase B5 domain BN424_2262 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BN424_2262 PF01409 tRNA synthetases class II core domain (F) BN424_2267 PF01638 HxlR-like helix-turn-helix BN424_2268 PF03358 NADPH-dependent FMN reductase BN424_227 PF00300 Histidine phosphatase superfamily (branch 1) BN424_2270 PF04542 Sigma-70 region 2 BN424_2270 PF08281 Sigma-70, region 4 BN424_2272 PF00588 SpoU rRNA Methylase family BN424_2272 PF08032 RNA 2'-O ribose methyltransferase substrate binding BN424_2273 PF01551 Peptidase family M23 BN424_2273 PF10145 Phage-related minor tail protein BN424_2273 PF01464 Transglycosylase SLT domain BN424_2274 PF00356 Bacterial regulatory proteins, lacI family BN424_2274 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BN424_2275 PF05043 Mga helix-turn-helix domain BN424_2275 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_2276 PF13091 PLD-like domain BN424_2276 PF13396 Phospholipase_D-nuclease N-terminal BN424_2277 PF01174 SNO glutamine amidotransferase family BN424_2278 PF01680 SOR/SNZ family BN424_2279 PF00155 Aminotransferase class I and II BN424_2279 PF00392 Bacterial regulatory proteins, gntR family BN424_2280 PF13401 AAA domain BN424_2282 PF00872 Transposase, Mutator family BN424_2283 PF06463 Molybdenum Cofactor Synthesis C BN424_2283 PF04055 Radical SAM superfamily BN424_2285 PF11975 Family 4 glycosyl hydrolase C-terminal domain BN424_2285 PF02056 Family 4 glycosyl hydrolase BN424_2288 PF00582 Universal stress protein family BN424_2289 PF00582 Universal stress protein family BN424_2291 PF00690 Cation transporter/ATPase, N-terminus BN424_2291 PF00689 Cation transporting ATPase, C-terminus BN424_2293 PF00881 Nitroreductase family BN424_2294 PF01047 MarR family BN424_2297 PF02872 5'-nucleotidase, C-terminal domain BN424_2297 PF00149 Calcineurin-like phosphoesterase BN424_2298 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2299 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2300 PF00005 ABC transporter BN424_2301 PF08220 DeoR-like helix-turn-helix domain BN424_2301 PF00455 DeoR C terminal sensor domain BN424_2305 PF00455 DeoR C terminal sensor domain BN424_2305 PF08220 DeoR-like helix-turn-helix domain BN424_2307 PF01116 Fructose-bisphosphate aldolase class-II BN424_2308 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_2308 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_2309 PF01261 Xylose isomerase-like TIM barrel BN424_2310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_2310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_2311 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN424_2311 PF00205 Thiamine pyrophosphate enzyme, central domain BN424_2311 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN424_2312 PF00294 pfkB family carbohydrate kinase BN424_2313 PF04962 KduI/IolB family BN424_2314 PF13700 Domain of unknown function (DUF4158) BN424_2314 PF01526 Tn3 transposase DDE domain BN424_2315 PF02796 Helix-turn-helix domain of resolvase BN424_2315 PF00239 Resolvase, N terminal domain BN424_2317 PF04203 Sortase domain BN424_2318 PF18698 Histidine kinase sensor domain BN424_2318 PF00512 His Kinase A (phospho-acceptor) domain BN424_2318 PF00989 PAS fold BN424_2318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2318 PF00672 HAMP domain BN424_2319 PF00486 Transcriptional regulatory protein, C terminal BN424_2319 PF00072 Response regulator receiver domain BN424_2321 PF07731 Multicopper oxidase BN424_2321 PF07732 Multicopper oxidase BN424_2323 PF00403 Heavy-metal-associated domain BN424_2324 PF03965 Penicillinase repressor BN424_2325 PF02655 ATP-grasp domain BN424_2325 PF18419 ATP-grasp-like domain BN424_2325 PF04262 Glutamate-cysteine ligase BN424_2327 PF01790 Prolipoprotein diacylglyceryl transferase BN424_2330 PF00877 NlpC/P60 family BN424_2331 PF01476 LysM domain BN424_2331 PF01551 Peptidase family M23 BN424_2335 PF02796 Helix-turn-helix domain of resolvase BN424_2335 PF00239 Resolvase, N terminal domain BN424_2336 PF13700 Domain of unknown function (DUF4158) BN424_2336 PF01526 Tn3 transposase DDE domain BN424_2338 PF02687 FtsX-like permease family BN424_2338 PF12704 MacB-like periplasmic core domain BN424_2339 PF00005 ABC transporter BN424_2344 PF00872 Transposase, Mutator family BN424_2347 PF00005 ABC transporter BN424_236 PF00232 Glycosyl hydrolase family 1 BN424_2360 PF01476 LysM domain BN424_2360 PF01551 Peptidase family M23 BN424_2365 PF13700 Domain of unknown function (DUF4158) BN424_2365 PF01526 Tn3 transposase DDE domain BN424_2366 PF02796 Helix-turn-helix domain of resolvase BN424_2366 PF00239 Resolvase, N terminal domain BN424_2367 PF01022 Bacterial regulatory protein, arsR family BN424_2368 PF00403 Heavy-metal-associated domain BN424_237 PF00041 Fibronectin type III domain BN424_237 PF03423 Carbohydrate binding domain (family 25) BN424_237 PF03065 Glycosyl hydrolase family 57 BN424_2370 PF00171 Aldehyde dehydrogenase family BN424_2371 PF08220 DeoR-like helix-turn-helix domain BN424_2371 PF00455 DeoR C terminal sensor domain BN424_2372 PF14552 Tautomerase enzyme BN424_2373 PF02653 Branched-chain amino acid transport system / permease component BN424_2374 PF00005 ABC transporter BN424_2375 PF13407 Periplasmic binding protein domain BN424_2378 PF00909 Ammonium Transporter Family BN424_2379 PF00543 Nitrogen regulatory protein P-II BN424_238 PF00704 Glycosyl hydrolases family 18 BN424_2381 PF00072 Response regulator receiver domain BN424_2381 PF12833 Helix-turn-helix domain BN424_2382 PF06580 Histidine kinase BN424_2382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2382 PF02743 Cache domain BN424_2382 PF00672 HAMP domain BN424_2385 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2387 PF00672 HAMP domain BN424_2387 PF00512 His Kinase A (phospho-acceptor) domain BN424_2388 PF00486 Transcriptional regulatory protein, C terminal BN424_2388 PF00072 Response regulator receiver domain BN424_239 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_2390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN424_2390 PF00005 ABC transporter BN424_2391 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN424_2391 PF00005 ABC transporter BN424_2392 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2392 PF12911 N-terminal TM domain of oligopeptide transport permease C BN424_2393 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2395 PF00579 tRNA synthetases class I (W and Y) BN424_2396 PF10437 Bacterial lipoate protein ligase C-terminus BN424_2396 PF03099 Biotin/lipoate A/B protein ligase family BN424_2397 PF12706 Beta-lactamase superfamily domain BN424_240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2401 PF05343 M42 glutamyl aminopeptidase BN424_2403 PF13840 ACT domain BN424_2403 PF00696 Amino acid kinase family BN424_2404 PF00733 Asparagine synthase BN424_2404 PF13537 Glutamine amidotransferase domain BN424_2406 PF03932 CutC family BN424_2407 PF01522 Polysaccharide deacetylase BN424_2407 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BN424_2409 PF00884 Sulfatase BN424_241 PF03611 PTS system sugar-specific permease component BN424_2412 PF00288 GHMP kinases N terminal domain BN424_2412 PF08544 GHMP kinases C terminal BN424_2413 PF03447 Homoserine dehydrogenase, NAD binding domain BN424_2413 PF01842 ACT domain BN424_2413 PF00742 Homoserine dehydrogenase BN424_2414 PF08796 Protein of unknown function (DUF1797) BN424_2415 PF00155 Aminotransferase class I and II BN424_2416 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN424_2416 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN424_2418 PF13439 Glycosyltransferase Family 4 BN424_2418 PF00534 Glycosyl transferases group 1 BN424_2419 PF13439 Glycosyltransferase Family 4 BN424_2419 PF00534 Glycosyl transferases group 1 BN424_2420 PF05524 PEP-utilising enzyme, N-terminal BN424_2420 PF00391 PEP-utilising enzyme, mobile domain BN424_2420 PF02896 PEP-utilising enzyme, TIM barrel domain BN424_2421 PF00381 PTS HPr component phosphorylation site BN424_2424 PF00004 ATPase family associated with various cellular activities (AAA) BN424_2424 PF07724 AAA domain (Cdc48 subfamily) BN424_2424 PF17871 AAA lid domain BN424_2424 PF10431 C-terminal, D2-small domain, of ClpB protein BN424_2425 PF02386 Cation transport protein BN424_2428 PF03144 Elongation factor Tu domain 2 BN424_2428 PF16658 Class II release factor RF3, C-terminal domain BN424_2428 PF00009 Elongation factor Tu GTP binding domain BN424_2429 PF03471 Transporter associated domain BN424_2429 PF01595 Cyclin M transmembrane N-terminal domain BN424_2429 PF00571 CBS domain BN424_2430 PF00565 Staphylococcal nuclease homologue BN424_2432 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_2432 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_2433 PF01594 AI-2E family transporter BN424_2435 PF05343 M42 glutamyl aminopeptidase BN424_2437 PF13673 Acetyltransferase (GNAT) domain BN424_2439 PF01769 Divalent cation transporter BN424_2439 PF03448 MgtE intracellular N domain BN424_2439 PF00571 CBS domain BN424_244 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BN424_244 PF08501 Shikimate dehydrogenase substrate binding domain BN424_2440 PF00849 RNA pseudouridylate synthase BN424_2441 PF01513 ATP-NAD kinase BN424_2442 PF04607 Region found in RelA / SpoT proteins BN424_2443 PF01928 CYTH domain BN424_2445 PF01432 Peptidase family M3 BN424_2445 PF08439 Oligopeptidase F BN424_2448 PF05389 Negative regulator of genetic competence (MecA) BN424_2449 PF03960 ArsC family BN424_245 PF00793 DAHP synthetase I family BN424_245 PF18152 DAHP synthase ferredoxin-like domain BN424_2450 PF00872 Transposase, Mutator family BN424_2451 PF05167 Uncharacterised ACR (DUF711) BN424_2453 PF00085 Thioredoxin BN424_2454 PF00999 Sodium/hydrogen exchanger family BN424_2456 PF00753 Metallo-beta-lactamase superfamily BN424_2458 PF02645 Uncharacterised protein, DegV family COG1307 BN424_2459 PF02810 SEC-C motif BN424_246 PF01761 3-dehydroquinate synthase BN424_2460 PF00534 Glycosyl transferases group 1 BN424_2460 PF13439 Glycosyltransferase Family 4 BN424_2462 PF13538 UvrD-like helicase C-terminal domain BN424_2463 PF13538 UvrD-like helicase C-terminal domain BN424_247 PF01264 Chorismate synthase BN424_248 PF02153 Prephenate dehydrogenase BN424_248 PF01842 ACT domain BN424_2481 PF01022 Bacterial regulatory protein, arsR family BN424_2484 PF00232 Glycosyl hydrolase family 1 BN424_2485 PF02522 Aminoglycoside 3-N-acetyltransferase BN424_2488 PF13536 Putative multidrug resistance efflux transporter BN424_249 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN424_2490 PF01791 DeoC/LacD family aldolase BN424_2491 PF00294 pfkB family carbohydrate kinase BN424_2492 PF01979 Amidohydrolase family BN424_2493 PF03613 PTS system mannose/fructose/sorbose family IID component BN424_2494 PF03609 PTS system sorbose-specific iic component BN424_2496 PF03830 PTS system sorbose subfamily IIB component BN424_2497 PF01380 SIS domain BN424_25 PF06458 MucBP domain BN424_250 PF01202 Shikimate kinase BN424_2500 PF02595 Glycerate kinase family BN424_2501 PF00890 FAD binding domain BN424_2501 PF14537 Cytochrome c3 BN424_2508 PF00005 ABC transporter BN424_251 PF01842 ACT domain BN424_251 PF00800 Prephenate dehydratase BN424_2512 PF08951 Enterocin A Immunity BN424_252 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_2537 PF00128 Alpha amylase, catalytic domain BN424_2537 PF16657 Maltogenic Amylase, C-terminal domain BN424_2538 PF13419 Haloacid dehalogenase-like hydrolase BN424_2539 PF13419 Haloacid dehalogenase-like hydrolase BN424_2540 PF03633 Glycosyl hydrolase family 65, C-terminal domain BN424_2540 PF03632 Glycosyl hydrolase family 65 central catalytic domain BN424_2540 PF03636 Glycosyl hydrolase family 65, N-terminal domain BN424_2542 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2543 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2544 PF13416 Bacterial extracellular solute-binding protein BN424_2545 PF02903 Alpha amylase, N-terminal ig-like domain BN424_2545 PF00128 Alpha amylase, catalytic domain BN424_2547 PF00356 Bacterial regulatory proteins, lacI family BN424_2548 PF01475 Ferric uptake regulator family BN424_2549 PF00202 Aminotransferase class-III BN424_255 PF02378 Phosphotransferase system, EIIC BN424_255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2550 PF06081 Aromatic acid exporter family member 1 BN424_2552 PF04167 Protein of unknown function (DUF402) BN424_2553 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_2553 PF05043 Mga helix-turn-helix domain BN424_2553 PF08270 M protein trans-acting positive regulator (MGA) PRD domain BN424_2555 PF14815 NUDIX domain BN424_2555 PF00730 HhH-GPD superfamily base excision DNA repair protein BN424_2556 PF02631 RecX family BN424_2557 PF01938 TRAM domain BN424_2557 PF05958 tRNA (Uracil-5-)-methyltransferase BN424_2558 PF05958 tRNA (Uracil-5-)-methyltransferase BN424_2558 PF01938 TRAM domain BN424_2559 PF01594 AI-2E family transporter BN424_256 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_256 PF08279 HTH domain BN424_256 PF05043 Mga helix-turn-helix domain BN424_256 PF00874 PRD domain BN424_256 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2562 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN424_2562 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BN424_2563 PF07687 Peptidase dimerisation domain BN424_2563 PF01546 Peptidase family M20/M25/M40 BN424_2566 PF01712 Deoxynucleoside kinase BN424_2567 PF02350 UDP-N-acetylglucosamine 2-epimerase BN424_2568 PF00483 Nucleotidyl transferase BN424_2569 PF03816 Cell envelope-related transcriptional attenuator domain BN424_257 PF05043 Mga helix-turn-helix domain BN424_257 PF00874 PRD domain BN424_257 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_257 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_257 PF08279 HTH domain BN424_2572 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BN424_2572 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BN424_2572 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BN424_2576 PF00132 Bacterial transferase hexapeptide (six repeats) BN424_2577 PF00872 Transposase, Mutator family BN424_2578 PF00872 Transposase, Mutator family BN424_2579 PF00872 Transposase, Mutator family BN424_2580 PF03631 Virulence factor BrkB BN424_2581 PF00557 Metallopeptidase family M24 BN424_2582 PF00258 Flavodoxin BN424_2586 PF02073 Thermophilic metalloprotease (M29) BN424_2592 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BN424_2593 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2594 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2596 PF02378 Phosphotransferase system, EIIC BN424_2597 PF00874 PRD domain BN424_2597 PF03610 PTS system fructose IIA component BN424_2597 PF00158 Sigma-54 interaction domain BN424_2598 PF00874 PRD domain BN424_2598 PF00158 Sigma-54 interaction domain BN424_2598 PF03610 PTS system fructose IIA component BN424_2599 PF00271 Helicase conserved C-terminal domain BN424_2599 PF00270 DEAD/DEAH box helicase BN424_2600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_2600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_2601 PF03749 Sugar fermentation stimulation protein RE domain BN424_2601 PF17746 SfsA N-terminal OB domain BN424_2605 PF01473 Putative cell wall binding repeat BN424_2605 PF01510 N-acetylmuramoyl-L-alanine amidase BN424_2612 PF01183 Glycosyl hydrolases family 25 BN424_2634 PF00436 Single-strand binding protein family BN424_2638 PF01555 DNA methylase BN424_266 PF14602 Hexapeptide repeat of succinyl-transferase BN424_266 PF12464 Maltose acetyltransferase BN424_2665 PF13408 Recombinase zinc beta ribbon domain BN424_2665 PF00239 Resolvase, N terminal domain BN424_2665 PF07508 Recombinase BN424_2666 PF05958 tRNA (Uracil-5-)-methyltransferase BN424_2666 PF01938 TRAM domain BN424_2667 PF00781 Diacylglycerol kinase catalytic domain BN424_2668 PF02637 GatB domain BN424_2668 PF02934 GatB/GatE catalytic domain BN424_2669 PF01425 Amidase BN424_2670 PF02686 Glu-tRNAGln amidotransferase C subunit BN424_2671 PF07537 CamS sex pheromone cAM373 precursor BN424_2672 PF03120 NAD-dependent DNA ligase OB-fold domain BN424_2672 PF01653 NAD-dependent DNA ligase adenylation domain BN424_2672 PF12826 Helix-hairpin-helix motif BN424_2672 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BN424_2672 PF00533 BRCA1 C Terminus (BRCT) domain BN424_2673 PF13361 UvrD-like helicase C-terminal domain BN424_2673 PF00580 UvrD/REP helicase N-terminal domain BN424_2676 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BN424_2676 PF02843 Phosphoribosylglycinamide synthetase, C domain BN424_2676 PF02844 Phosphoribosylglycinamide synthetase, N domain BN424_2677 PF01808 AICARFT/IMPCHase bienzyme BN424_2677 PF02142 MGS-like domain BN424_2678 PF00551 Formyl transferase BN424_2679 PF02769 AIR synthase related protein, C-terminal domain BN424_2679 PF00586 AIR synthase related protein, N-terminal domain BN424_268 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_2680 PF00156 Phosphoribosyl transferase domain BN424_2680 PF13537 Glutamine amidotransferase domain BN424_2681 PF00586 AIR synthase related protein, N-terminal domain BN424_2681 PF02769 AIR synthase related protein, C-terminal domain BN424_2681 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BN424_2683 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BN424_2684 PF01259 SAICAR synthetase BN424_2685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_2686 PF00009 Elongation factor Tu GTP binding domain BN424_2686 PF03144 Elongation factor Tu domain 2 BN424_2686 PF03143 Elongation factor Tu C-terminal domain BN424_2688 PF00376 MerR family regulatory protein BN424_2688 PF09278 MerR, DNA binding BN424_2689 PF03952 Enolase, N-terminal domain BN424_2689 PF00113 Enolase, C-terminal TIM barrel domain BN424_2690 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BN424_2690 PF01676 Metalloenzyme superfamily BN424_2691 PF00121 Triosephosphate isomerase BN424_2692 PF00162 Phosphoglycerate kinase BN424_2693 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BN424_2693 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BN424_2694 PF04198 Putative sugar-binding domain BN424_2695 PF00309 Sigma-54 factor, Activator interacting domain (AID) BN424_2695 PF04963 Sigma-54 factor, core binding domain BN424_2695 PF04552 Sigma-54, DNA binding domain BN424_2699 PF00574 Clp protease BN424_27 PF00772 DnaB-like helicase N terminal domain BN424_27 PF03796 DnaB-like helicase C terminal domain BN424_2701 PF02650 WhiA C-terminal HTH domain BN424_2701 PF14527 WhiA LAGLIDADG-like domain BN424_2701 PF10298 WhiA N-terminal LAGLIDADG-like domain BN424_2702 PF01933 Uncharacterised protein family UPF0052 BN424_2703 PF03668 P-loop ATPase protein family BN424_2704 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN424_2704 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN424_2704 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN424_2704 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN424_2705 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_2707 PF00483 Nucleotidyl transferase BN424_2708 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BN424_2708 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BN424_2709 PF13419 Haloacid dehalogenase-like hydrolase BN424_2710 PF01790 Prolipoprotein diacylglyceryl transferase BN424_2711 PF02603 HPr Serine kinase N terminus BN424_2711 PF07475 HPr Serine kinase C-terminal domain BN424_2712 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BN424_2715 PF13349 Putative adhesin BN424_2716 PF17755 UvrA DNA-binding domain BN424_2716 PF17760 UvrA interaction domain BN424_2716 PF00005 ABC transporter BN424_2719 PF01895 PhoU domain BN424_2720 PF00005 ABC transporter BN424_2721 PF00005 ABC transporter BN424_2722 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2723 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2724 PF12849 PBP superfamily domain BN424_2725 PF12849 PBP superfamily domain BN424_2727 PF16736 Single Cache-like BN424_2727 PF00989 PAS fold BN424_2727 PF00512 His Kinase A (phospho-acceptor) domain BN424_2727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2728 PF00072 Response regulator receiver domain BN424_2728 PF00486 Transcriptional regulatory protein, C terminal BN424_273 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN424_273 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN424_2730 PF01476 LysM domain BN424_2730 PF00877 NlpC/P60 family BN424_2730 PF08239 Bacterial SH3 domain BN424_2731 PF02687 FtsX-like permease family BN424_2731 PF18075 FtsX extracellular domain BN424_2732 PF00005 ABC transporter BN424_2733 PF00472 RF-1 domain BN424_2733 PF03462 PCRF domain BN424_2734 PF07517 SecA DEAD-like domain BN424_2734 PF01043 SecA preprotein cross-linking domain BN424_2734 PF07516 SecA Wing and Scaffold domain BN424_2734 PF02810 SEC-C motif BN424_2735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BN424_2735 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BN424_2737 PF04851 Type III restriction enzyme, res subunit BN424_2737 PF00271 Helicase conserved C-terminal domain BN424_2738 PF02645 Uncharacterised protein, DegV family COG1307 BN424_2739 PF01205 Uncharacterized protein family UPF0029 BN424_2739 PF09186 Domain of unknown function (DUF1949) BN424_274 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN424_274 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN424_2740 PF03816 Cell envelope-related transcriptional attenuator domain BN424_2741 PF00953 Glycosyl transferase family 4 BN424_2742 PF03816 Cell envelope-related transcriptional attenuator domain BN424_2744 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BN424_2745 PF01979 Amidohydrolase family BN424_2747 PF00440 Bacterial regulatory proteins, tetR family BN424_2747 PF17932 Tetracyclin repressor-like, C-terminal domain BN424_2748 PF00884 Sulfatase BN424_2749 PF00535 Glycosyl transferase family 2 BN424_275 PF13520 Amino acid permease BN424_2750 PF04138 GtrA-like protein BN424_2751 PF02540 NAD synthase BN424_2752 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BN424_2752 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BN424_2752 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BN424_2753 PF00535 Glycosyl transferase family 2 BN424_2755 PF04321 RmlD substrate binding domain BN424_2756 PF16363 GDP-mannose 4,6 dehydratase BN424_2757 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BN424_2758 PF00483 Nucleotidyl transferase BN424_276 PF00696 Amino acid kinase family BN424_2761 PF00535 Glycosyl transferase family 2 BN424_2764 PF02706 Chain length determinant protein BN424_2766 PF00884 Sulfatase BN424_2767 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BN424_2767 PF01476 LysM domain BN424_2768 PF16363 GDP-mannose 4,6 dehydratase BN424_2770 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BN424_2771 PF00118 TCP-1/cpn60 chaperonin family BN424_2772 PF00166 Chaperonin 10 Kd subunit BN424_2773 PF02517 CPBP intramembrane metalloprotease BN424_2775 PF06971 Putative DNA-binding protein N-terminus BN424_2775 PF02629 CoA binding domain BN424_2776 PF00005 ABC transporter BN424_2776 PF12848 ABC transporter BN424_2776 PF16326 ABC transporter C-terminal domain BN424_2777 PF03816 Cell envelope-related transcriptional attenuator domain BN424_2778 PF00814 Glycoprotease family BN424_2781 PF00814 Glycoprotease family BN424_2789 PF04203 Sortase domain BN424_2798 PF04851 Type III restriction enzyme, res subunit BN424_2798 PF00271 Helicase conserved C-terminal domain BN424_2798 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BN424_2798 PF08463 EcoEI R protein C-terminal BN424_2799 PF00293 NUDIX domain BN424_28 PF00709 Adenylosuccinate synthetase BN424_280 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BN424_2800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_2800 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_2801 PF00872 Transposase, Mutator family BN424_2805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BN424_2809 PF09234 Domain of unknown function (DUF1963) BN424_281 PF00300 Histidine phosphatase superfamily (branch 1) BN424_2811 PF00753 Metallo-beta-lactamase superfamily BN424_2813 PF00872 Transposase, Mutator family BN424_2814 PF01048 Phosphorylase superfamily BN424_2815 PF01676 Metalloenzyme superfamily BN424_2819 PF02608 ABC transporter substrate-binding protein PnrA-like BN424_282 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_282 PF03466 LysR substrate binding domain BN424_2820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN424_2821 PF00860 Permease family BN424_2822 PF01791 DeoC/LacD family aldolase BN424_2823 PF02885 Glycosyl transferase family, helical bundle domain BN424_2823 PF00591 Glycosyl transferase family, a/b domain BN424_2823 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BN424_2824 PF00356 Bacterial regulatory proteins, lacI family BN424_2825 PF00356 Bacterial regulatory proteins, lacI family BN424_2827 PF16197 Ketoacyl-synthetase C-terminal extension BN424_2827 PF00109 Beta-ketoacyl synthase, N-terminal domain BN424_2827 PF00107 Zinc-binding dehydrogenase BN424_2827 PF00550 Phosphopantetheine attachment site BN424_2827 PF00698 Acyl transferase domain BN424_2827 PF08240 Alcohol dehydrogenase GroES-like domain BN424_2827 PF08659 KR domain BN424_2827 PF14765 Polyketide synthase dehydratase BN424_2827 PF02801 Beta-ketoacyl synthase, C-terminal domain BN424_2828 PF01047 MarR family BN424_2832 PF03641 Possible lysine decarboxylase BN424_2833 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_2833 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_2835 PF04237 YjbR BN424_2837 PF13280 WYL domain BN424_2837 PF08279 HTH domain BN424_2840 PF07478 D-ala D-ala ligase C-terminus BN424_2840 PF01820 D-ala D-ala ligase N-terminus BN424_2841 PF13739 Deacetylase PdaC BN424_2841 PF01522 Polysaccharide deacetylase BN424_2841 PF11738 Protein of unknown function (DUF3298) BN424_2845 PF01197 Ribosomal protein L31 BN424_2846 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN424_2846 PF07498 Rho termination factor, N-terminal domain BN424_2846 PF07497 Rho termination factor, RNA-binding domain BN424_2847 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN424_2848 PF00117 Glutamine amidotransferase class-I BN424_2848 PF06418 CTP synthase N-terminus BN424_2849 PF05066 HB1, ASXL, restriction endonuclease HTH domain BN424_285 PF00291 Pyridoxal-phosphate dependent enzyme BN424_285 PF14821 Threonine synthase N terminus BN424_2851 PF04198 Putative sugar-binding domain BN424_2853 PF02780 Transketolase, C-terminal domain BN424_2853 PF02779 Transketolase, pyrimidine binding domain BN424_2854 PF00676 Dehydrogenase E1 component BN424_2855 PF03099 Biotin/lipoate A/B protein ligase family BN424_2856 PF01966 HD domain BN424_2858 PF01361 Tautomerase enzyme BN424_2859 PF02566 OsmC-like protein BN424_2862 PF01546 Peptidase family M20/M25/M40 BN424_2864 PF02378 Phosphotransferase system, EIIC BN424_2865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_2866 PF07702 UTRA domain BN424_2866 PF00392 Bacterial regulatory proteins, gntR family BN424_2867 PF01112 Asparaginase BN424_2873 PF00282 Pyridoxal-dependent decarboxylase conserved domain BN424_2874 PF13520 Amino acid permease BN424_2876 PF12822 ECF transporter, substrate-specific component BN424_2877 PF09383 NIL domain BN424_2877 PF00005 ABC transporter BN424_2878 PF00528 Binding-protein-dependent transport system inner membrane component BN424_2879 PF03180 NLPA lipoprotein BN424_2880 PF02142 MGS-like domain BN424_2881 PF07690 Major Facilitator Superfamily BN424_2882 PF07690 Major Facilitator Superfamily BN424_2883 PF01487 Type I 3-dehydroquinase BN424_2884 PF07690 Major Facilitator Superfamily BN424_2885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BN424_2885 PF08501 Shikimate dehydrogenase substrate binding domain BN424_2886 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN424_2886 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_2887 PF03466 LysR substrate binding domain BN424_2887 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_2891 PF13407 Periplasmic binding protein domain BN424_2892 PF02653 Branched-chain amino acid transport system / permease component BN424_2893 PF00005 ABC transporter BN424_2894 PF05025 RbsD / FucU transport protein family BN424_2895 PF00294 pfkB family carbohydrate kinase BN424_2896 PF00356 Bacterial regulatory proteins, lacI family BN424_29 PF00072 Response regulator receiver domain BN424_29 PF08279 HTH domain BN424_2902 PF07690 Major Facilitator Superfamily BN424_2907 PF01381 Helix-turn-helix BN424_2909 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BN424_2913 PF02525 Flavodoxin-like fold BN424_2918 PF01872 RibD C-terminal domain BN424_292 PF00877 NlpC/P60 family BN424_292 PF01476 LysM domain BN424_2923 PF02540 NAD synthase BN424_2923 PF00117 Glutamine amidotransferase class-I BN424_2923 PF00958 GMP synthase C terminal domain BN424_2924 PF00485 Phosphoribulokinase / Uridine kinase family BN424_2925 PF00288 GHMP kinases N terminal domain BN424_2925 PF08544 GHMP kinases C terminal BN424_2925 PF10509 Galactokinase galactose-binding signature BN424_2927 PF00288 GHMP kinases N terminal domain BN424_2927 PF08544 GHMP kinases C terminal BN424_2928 PF01070 FMN-dependent dehydrogenase BN424_2929 PF00107 Zinc-binding dehydrogenase BN424_2929 PF08240 Alcohol dehydrogenase GroES-like domain BN424_293 PF07690 Major Facilitator Superfamily BN424_2932 PF03061 Thioesterase superfamily BN424_2945 PF00300 Histidine phosphatase superfamily (branch 1) BN424_2947 PF01226 Formate/nitrite transporter BN424_295 PF17912 MalK OB fold domain BN424_295 PF00005 ABC transporter BN424_295 PF03459 TOBE domain BN424_2956 PF01717 Cobalamin-independent synthase, Catalytic domain BN424_2957 PF01594 AI-2E family transporter BN424_2966 PF00689 Cation transporting ATPase, C-terminus BN424_2966 PF00690 Cation transporter/ATPase, N-terminus BN424_2968 PF01381 Helix-turn-helix BN424_2972 PF00367 phosphotransferase system, EIIB BN424_2972 PF02378 Phosphotransferase system, EIIC BN424_2972 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_2973 PF03123 CAT RNA binding domain BN424_2973 PF00874 PRD domain BN424_2975 PF01965 DJ-1/PfpI family BN424_2976 PF00005 ABC transporter BN424_2977 PF07859 alpha/beta hydrolase fold BN424_2978 PF04055 Radical SAM superfamily BN424_2979 PF00690 Cation transporter/ATPase, N-terminus BN424_2979 PF00689 Cation transporting ATPase, C-terminus BN424_2981 PF02687 FtsX-like permease family BN424_2982 PF00005 ABC transporter BN424_2989 PF00696 Amino acid kinase family BN424_299 PF00465 Iron-containing alcohol dehydrogenase BN424_2990 PF00171 Aldehyde dehydrogenase family BN424_2993 PF12706 Beta-lactamase superfamily domain BN424_2994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_2994 PF00512 His Kinase A (phospho-acceptor) domain BN424_2995 PF00072 Response regulator receiver domain BN424_2995 PF00486 Transcriptional regulatory protein, C terminal BN424_2997 PF07071 KDGP aldolase BN424_2998 PF03841 L-seryl-tRNA selenium transferase BN424_2999 PF01979 Amidohydrolase family BN424_30 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BN424_30 PF17203 Single cache domain 3 BN424_30 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_30 PF00989 PAS fold BN424_300 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_3002 PF02378 Phosphotransferase system, EIIC BN424_301 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3010 PF00392 Bacterial regulatory proteins, gntR family BN424_3010 PF07702 UTRA domain BN424_3012 PF00232 Glycosyl hydrolase family 1 BN424_3013 PF02378 Phosphotransferase system, EIIC BN424_3015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_3015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_302 PF00155 Aminotransferase class I and II BN424_3020 PF02705 K+ potassium transporter BN424_3022 PF00480 ROK family BN424_3024 PF01074 Glycosyl hydrolases family 38 N-terminal domain BN424_3024 PF09261 Alpha mannosidase middle domain BN424_3024 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain BN424_3024 PF07748 Glycosyl hydrolases family 38 C-terminal domain BN424_3024 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 BN424_3026 PF00392 Bacterial regulatory proteins, gntR family BN424_3028 PF00005 ABC transporter BN424_3030 PF00041 Fibronectin type III domain BN424_3030 PF00963 Cohesin domain BN424_3030 PF07555 beta-N-acetylglucosaminidase BN424_3030 PF00754 F5/8 type C domain BN424_3030 PF02838 Glycosyl hydrolase family 20, domain 2 BN424_3031 PF07702 UTRA domain BN424_3031 PF00392 Bacterial regulatory proteins, gntR family BN424_3032 PF00232 Glycosyl hydrolase family 1 BN424_3033 PF02378 Phosphotransferase system, EIIC BN424_3034 PF01266 FAD dependent oxidoreductase BN424_3035 PF01925 Sulfite exporter TauE/SafE BN424_3037 PF00005 ABC transporter BN424_3039 PF02368 Bacterial Ig-like domain (group 2) BN424_3043 PF02368 Bacterial Ig-like domain (group 2) BN424_3047 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_3047 PF05043 Mga helix-turn-helix domain BN424_3047 PF08270 M protein trans-acting positive regulator (MGA) PRD domain BN424_3051 PF04203 Sortase domain BN424_3052 PF01032 FecCD transport family BN424_3053 PF01497 Periplasmic binding protein BN424_3054 PF05031 Iron Transport-associated domain BN424_3055 PF05031 Iron Transport-associated domain BN424_3058 PF01370 NAD dependent epimerase/dehydratase family BN424_3059 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BN424_3059 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BN424_3059 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BN424_3061 PF00534 Glycosyl transferases group 1 BN424_3061 PF13439 Glycosyltransferase Family 4 BN424_3062 PF02397 Bacterial sugar transferase BN424_3063 PF00535 Glycosyl transferase family 2 BN424_3066 PF13807 G-rich domain on putative tyrosine kinase BN424_3066 PF13614 AAA domain BN424_3066 PF02706 Chain length determinant protein BN424_3073 PF01741 Large-conductance mechanosensitive channel, MscL BN424_3074 PF01061 ABC-2 type transporter BN424_3076 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN424_3076 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN424_3077 PF02225 PA domain BN424_3077 PF00082 Subtilase family BN424_3077 PF00746 LPXTG cell wall anchor motif BN424_3077 PF06280 Fn3-like domain BN424_3078 PF07690 Major Facilitator Superfamily BN424_3081 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN424_3081 PF10371 Domain of unknown function BN424_3081 PF12838 4Fe-4S dicluster domain BN424_3081 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BN424_3081 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BN424_3081 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BN424_3087 PF06458 MucBP domain BN424_3090 PF01497 Periplasmic binding protein BN424_3091 PF01032 FecCD transport family BN424_3092 PF01032 FecCD transport family BN424_3093 PF00005 ABC transporter BN424_3094 PF08000 Bacterial PH domain BN424_3096 PF01638 HxlR-like helix-turn-helix BN424_3097 PF08713 DNA alkylation repair enzyme BN424_3098 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_3098 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_3099 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BN424_3099 PF13378 Enolase C-terminal domain-like BN424_31 PF03390 2-hydroxycarboxylate transporter family BN424_3100 PF00561 alpha/beta hydrolase fold BN424_3101 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN424_3101 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN424_3101 PF16582 Middle domain of thiamine pyrophosphate BN424_3102 PF00425 chorismate binding enzyme BN424_3104 PF01074 Glycosyl hydrolases family 38 N-terminal domain BN424_3104 PF07748 Glycosyl hydrolases family 38 C-terminal domain BN424_3104 PF09261 Alpha mannosidase middle domain BN424_3105 PF02378 Phosphotransferase system, EIIC BN424_3105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_3105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3106 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3107 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3107 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_3108 PF05043 Mga helix-turn-helix domain BN424_3108 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BN424_3108 PF00874 PRD domain BN424_3109 PF02378 Phosphotransferase system, EIIC BN424_3110 PF13807 G-rich domain on putative tyrosine kinase BN424_3110 PF02706 Chain length determinant protein BN424_3111 PF13614 AAA domain BN424_3112 PF02378 Phosphotransferase system, EIIC BN424_3113 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3114 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BN424_3116 PF00158 Sigma-54 interaction domain BN424_3116 PF00874 PRD domain BN424_3116 PF03610 PTS system fructose IIA component BN424_3117 PF03009 Glycerophosphoryl diester phosphodiesterase family BN424_3118 PF03009 Glycerophosphoryl diester phosphodiesterase family BN424_3119 PF13416 Bacterial extracellular solute-binding protein BN424_3120 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3121 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3122 PF00005 ABC transporter BN424_3122 PF03459 TOBE domain BN424_3122 PF17912 MalK OB fold domain BN424_3123 PF07690 Major Facilitator Superfamily BN424_3124 PF09261 Alpha mannosidase middle domain BN424_3124 PF01074 Glycosyl hydrolases family 38 N-terminal domain BN424_3124 PF07748 Glycosyl hydrolases family 38 C-terminal domain BN424_3126 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3127 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3127 PF02378 Phosphotransferase system, EIIC BN424_3127 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_3128 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_3128 PF05043 Mga helix-turn-helix domain BN424_3128 PF08279 HTH domain BN424_3128 PF00874 PRD domain BN424_3128 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_3129 PF02056 Family 4 glycosyl hydrolase BN424_3129 PF11975 Family 4 glycosyl hydrolase C-terminal domain BN424_3130 PF00881 Nitroreductase family BN424_3131 PF01638 HxlR-like helix-turn-helix BN424_3132 PF14579 Helix-hairpin-helix motif BN424_3132 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN424_3132 PF11490 DNA polymerase III polC-type N-terminus II BN424_3132 PF02811 PHP domain BN424_3132 PF00929 Exonuclease BN424_3132 PF01336 OB-fold nucleic acid binding domain BN424_3132 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN424_3133 PF00929 Exonuclease BN424_3133 PF02811 PHP domain BN424_3133 PF01336 OB-fold nucleic acid binding domain BN424_3133 PF14480 DNA polymerase III polC-type N-terminus I BN424_3133 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN424_3133 PF14579 Helix-hairpin-helix motif BN424_3133 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN424_3133 PF11490 DNA polymerase III polC-type N-terminus II BN424_3134 PF02386 Cation transport protein BN424_3135 PF13302 Acetyltransferase (GNAT) domain BN424_3136 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BN424_3139 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BN424_314 PF07690 Major Facilitator Superfamily BN424_3140 PF01541 GIY-YIG catalytic domain BN424_3141 PF05175 Methyltransferase small domain BN424_3143 PF00005 ABC transporter BN424_315 PF00962 Adenosine/AMP deaminase BN424_3150 PF04237 YjbR BN424_3152 PF00403 Heavy-metal-associated domain BN424_3153 PF00403 Heavy-metal-associated domain BN424_3156 PF13350 Tyrosine phosphatase family BN424_3160 PF00999 Sodium/hydrogen exchanger family BN424_3161 PF07687 Peptidase dimerisation domain BN424_3161 PF01546 Peptidase family M20/M25/M40 BN424_3162 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BN424_3166 PF00872 Transposase, Mutator family BN424_3168 PF13457 GW (Gly-Tryp) dipeptide domain BN424_3168 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BN424_3169 PF00072 Response regulator receiver domain BN424_3169 PF00486 Transcriptional regulatory protein, C terminal BN424_3170 PF00512 His Kinase A (phospho-acceptor) domain BN424_3170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_3170 PF16736 Single Cache-like BN424_3170 PF00989 PAS fold BN424_3175 PF06628 Catalase-related immune-responsive BN424_3175 PF00199 Catalase BN424_3178 PF00368 Hydroxymethylglutaryl-coenzyme A reductase BN424_3179 PF02803 Thiolase, C-terminal domain BN424_3179 PF00108 Thiolase, N-terminal domain BN424_318 PF00692 dUTPase BN424_3180 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BN424_3180 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BN424_3181 PF00563 EAL domain BN424_3181 PF00990 Diguanylate cyclase, GGDEF domain BN424_3181 PF03707 Bacterial signalling protein N terminal repeat BN424_3182 PF03707 Bacterial signalling protein N terminal repeat BN424_3182 PF00563 EAL domain BN424_3182 PF00990 Diguanylate cyclase, GGDEF domain BN424_319 PF00872 Transposase, Mutator family BN424_3191 PF02378 Phosphotransferase system, EIIC BN424_3192 PF01297 Zinc-uptake complex component A periplasmic BN424_3193 PF00005 ABC transporter BN424_3197 PF01904 Protein of unknown function DUF72 BN424_3198 PF02378 Phosphotransferase system, EIIC BN424_3199 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BN424_32 PF03949 Malic enzyme, NAD binding domain BN424_32 PF00390 Malic enzyme, N-terminal domain BN424_3201 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BN424_3201 PF01565 FAD binding domain BN424_3203 PF00486 Transcriptional regulatory protein, C terminal BN424_3203 PF00072 Response regulator receiver domain BN424_3204 PF13426 PAS domain BN424_3204 PF00672 HAMP domain BN424_3204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_3204 PF00512 His Kinase A (phospho-acceptor) domain BN424_3205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_3206 PF03372 Endonuclease/Exonuclease/phosphatase family BN424_3207 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN424_3208 PF06257 Biofilm formation stimulator VEG BN424_3209 PF00398 Ribosomal RNA adenine dimethylase BN424_3210 PF01751 Toprim domain BN424_3210 PF13331 Domain of unknown function (DUF4093) BN424_3211 PF01026 TatD related DNase BN424_3212 PF01588 Putative tRNA binding domain BN424_3212 PF09334 tRNA synthetases class I (M) BN424_3212 PF08264 Anticodon-binding domain of tRNA BN424_3215 PF13193 AMP-binding enzyme C-terminal domain BN424_3215 PF00501 AMP-binding enzyme BN424_3216 PF00378 Enoyl-CoA hydratase/isomerase BN424_3217 PF03061 Thioesterase superfamily BN424_3218 PF00582 Universal stress protein family BN424_3228 PF02632 BioY family BN424_3232 PF00690 Cation transporter/ATPase, N-terminus BN424_3232 PF00689 Cation transporting ATPase, C-terminus BN424_3233 PF02811 PHP domain BN424_3234 PF00877 NlpC/P60 family BN424_3237 PF06100 MCRA family BN424_3239 PF01709 Transcriptional regulator BN424_3242 PF13460 NAD(P)H-binding BN424_3243 PF02082 Transcriptional regulator BN424_3244 PF02163 Peptidase family M50 BN424_3245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_3246 PF00232 Glycosyl hydrolase family 1 BN424_3247 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BN424_3248 PF02378 Phosphotransferase system, EIIC BN424_3251 PF06156 Initiation control protein YabA BN424_3252 PF04468 PSP1 C-terminal conserved region BN424_3253 PF09115 DNA polymerase III, delta subunit, C terminal BN424_3254 PF06153 Cyclic-di-AMP receptor BN424_3255 PF02223 Thymidylate kinase BN424_3256 PF07690 Major Facilitator Superfamily BN424_3257 PF01047 MarR family BN424_3261 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BN424_3261 PF01276 Orn/Lys/Arg decarboxylase, major domain BN424_3263 PF02132 RecR protein BN424_3263 PF13662 Toprim domain BN424_3264 PF02575 YbaB/EbfC DNA-binding family BN424_3265 PF12169 DNA polymerase III subunits gamma and tau domain III BN424_3272 PF02705 K+ potassium transporter BN424_3276 PF03009 Glycerophosphoryl diester phosphodiesterase family BN424_333 PF06725 3D domain BN424_3334 PF00589 Phage integrase family BN424_3334 PF14659 Phage integrase, N-terminal SAM-like domain BN424_3335 PF14748 Pyrroline-5-carboxylate reductase dimerisation BN424_3335 PF03807 NADP oxidoreductase coenzyme F420-dependent BN424_3336 PF14437 MafB19-like deaminase BN424_3337 PF13556 PucR C-terminal helix-turn-helix domain BN424_3339 PF00004 ATPase family associated with various cellular activities (AAA) BN424_3339 PF10431 C-terminal, D2-small domain, of ClpB protein BN424_3339 PF17871 AAA lid domain BN424_3339 PF07724 AAA domain (Cdc48 subfamily) BN424_3339 PF02861 Clp amino terminal domain, pathogenicity island component BN424_334 PF17158 Membrane-associated sensor, integral membrane domain BN424_334 PF00990 Diguanylate cyclase, GGDEF domain BN424_3340 PF05848 CtsR N-terminal HTH domain BN424_3340 PF17727 CtsR C-terminal dimerization domain BN424_335 PF00872 Transposase, Mutator family BN424_3360 PF02378 Phosphotransferase system, EIIC BN424_3361 PF00268 Ribonucleotide reductase, small chain BN424_3362 PF08343 Ribonucleotide reductase N-terminal BN424_3362 PF00317 Ribonucleotide reductase, all-alpha domain BN424_3362 PF02867 Ribonucleotide reductase, barrel domain BN424_3363 PF07972 NrdI Flavodoxin like BN424_3369 PF00072 Response regulator receiver domain BN424_3369 PF01339 CheB methylesterase BN424_337 PF01595 Cyclin M transmembrane N-terminal domain BN424_337 PF03471 Transporter associated domain BN424_337 PF00571 CBS domain BN424_3372 PF00535 Glycosyl transferase family 2 BN424_3373 PF03275 UDP-galactopyranose mutase BN424_3376 PF01207 Dihydrouridine synthase (Dus) BN424_3377 PF01042 Endoribonuclease L-PSP BN424_3378 PF01915 Glycosyl hydrolase family 3 C-terminal domain BN424_3378 PF00933 Glycosyl hydrolase family 3 N terminal domain BN424_3378 PF14310 Fibronectin type III-like domain BN424_338 PF00730 HhH-GPD superfamily base excision DNA repair protein BN424_338 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BN424_3391 PF01381 Helix-turn-helix BN424_3392 PF06458 MucBP domain BN424_3399 PF00910 RNA helicase BN424_3399 PF01719 Plasmid replication protein BN424_340 PF12833 Helix-turn-helix domain BN424_340 PF02805 Metal binding domain of Ada BN424_3401 PF00380 Ribosomal protein S9/S16 BN424_3402 PF00572 Ribosomal protein L13 BN424_3404 PF01416 tRNA pseudouridine synthase BN424_3405 PF02361 Cobalt transport protein BN424_3406 PF00005 ABC transporter BN424_3407 PF00005 ABC transporter BN424_341 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN424_341 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN424_3411 PF01196 Ribosomal protein L17 BN424_3412 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BN424_3412 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BN424_3412 PF01000 RNA polymerase Rpb3/RpoA insert domain BN424_3413 PF00411 Ribosomal protein S11 BN424_3414 PF00416 Ribosomal protein S13/S18 BN424_3415 PF00444 Ribosomal protein L36 BN424_3416 PF01176 Translation initiation factor 1A / IF-1 BN424_3417 PF05191 Adenylate kinase, active site lid BN424_3418 PF00344 SecY translocase BN424_3419 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BN424_3420 PF00327 Ribosomal protein L30p/L7e BN424_3421 PF03719 Ribosomal protein S5, C-terminal domain BN424_3421 PF00333 Ribosomal protein S5, N-terminal domain BN424_3422 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BN424_3423 PF00347 Ribosomal protein L6 BN424_3424 PF00410 Ribosomal protein S8 BN424_3425 PF00253 Ribosomal protein S14p/S29e BN424_3426 PF00673 ribosomal L5P family C-terminus BN424_3426 PF00281 Ribosomal protein L5 BN424_3427 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BN424_3427 PF00467 KOW motif BN424_3428 PF00238 Ribosomal protein L14p/L23e BN424_3429 PF00366 Ribosomal protein S17 BN424_3430 PF00831 Ribosomal L29 protein BN424_3431 PF00252 Ribosomal protein L16p/L10e BN424_3432 PF07650 KH domain BN424_3432 PF00189 Ribosomal protein S3, C-terminal domain BN424_3433 PF00237 Ribosomal protein L22p/L17e BN424_3434 PF00203 Ribosomal protein S19 BN424_3435 PF03947 Ribosomal Proteins L2, C-terminal domain BN424_3435 PF00181 Ribosomal Proteins L2, RNA binding domain BN424_3436 PF00276 Ribosomal protein L23 BN424_3437 PF00573 Ribosomal protein L4/L1 family BN424_3438 PF00297 Ribosomal protein L3 BN424_3439 PF00338 Ribosomal protein S10p/S20e BN424_344 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BN424_3440 PF01063 Amino-transferase class IV BN424_3442 PF00009 Elongation factor Tu GTP binding domain BN424_3442 PF03144 Elongation factor Tu domain 2 BN424_3442 PF03143 Elongation factor Tu C-terminal domain BN424_3443 PF03144 Elongation factor Tu domain 2 BN424_3443 PF00679 Elongation factor G C-terminus BN424_3443 PF14492 Elongation Factor G, domain II BN424_3443 PF00009 Elongation factor Tu GTP binding domain BN424_3443 PF03764 Elongation factor G, domain IV BN424_3444 PF00177 Ribosomal protein S7p/S5e BN424_3445 PF00164 Ribosomal protein S12/S23 BN424_3446 PF01478 Type IV leader peptidase family BN424_3446 PF06750 Bacterial Peptidase A24 N-terminal domain BN424_3447 PF04998 RNA polymerase Rpb1, domain 5 BN424_3447 PF00623 RNA polymerase Rpb1, domain 2 BN424_3447 PF05000 RNA polymerase Rpb1, domain 4 BN424_3447 PF04997 RNA polymerase Rpb1, domain 1 BN424_3447 PF04983 RNA polymerase Rpb1, domain 3 BN424_3448 PF04560 RNA polymerase Rpb2, domain 7 BN424_3448 PF04565 RNA polymerase Rpb2, domain 3 BN424_3448 PF04561 RNA polymerase Rpb2, domain 2 BN424_3448 PF04563 RNA polymerase beta subunit BN424_3448 PF10385 RNA polymerase beta subunit external 1 domain BN424_3448 PF00562 RNA polymerase Rpb2, domain 6 BN424_345 PF00282 Pyridoxal-dependent decarboxylase conserved domain BN424_3450 PF01470 Pyroglutamyl peptidase BN424_3455 PF05175 Methyltransferase small domain BN424_3457 PF00106 short chain dehydrogenase BN424_3458 PF00248 Aldo/keto reductase family BN424_3459 PF01638 HxlR-like helix-turn-helix BN424_3460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BN424_3460 PF00356 Bacterial regulatory proteins, lacI family BN424_3462 PF00542 Ribosomal protein L7/L12 C-terminal domain BN424_3462 PF16320 Ribosomal protein L7/L12 dimerisation domain BN424_3463 PF00466 Ribosomal protein L10 BN424_3464 PF00687 Ribosomal protein L1p/L10e family BN424_3465 PF03946 Ribosomal protein L11, N-terminal domain BN424_3465 PF00298 Ribosomal protein L11, RNA binding domain BN424_3467 PF02357 Transcription termination factor nusG BN424_3467 PF00467 KOW motif BN424_3468 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BN424_3469 PF00471 Ribosomal protein L33 BN424_347 PF13520 Amino acid permease BN424_3471 PF02424 ApbE family BN424_3472 PF04205 FMN-binding domain BN424_3473 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_3473 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_3476 PF00348 Polyprenyl synthetase BN424_3477 PF01721 Class II bacteriocin BN424_3479 PF00872 Transposase, Mutator family BN424_3481 PF05991 YacP-like NYN domain BN424_3482 PF08032 RNA 2'-O ribose methyltransferase substrate binding BN424_3482 PF00588 SpoU rRNA Methylase family BN424_3483 PF00636 Ribonuclease III domain BN424_3484 PF01406 tRNA synthetases class I (C) catalytic domain BN424_3484 PF09190 DALR domain BN424_3485 PF00132 Bacterial transferase hexapeptide (six repeats) BN424_3486 PF00749 tRNA synthetases class I (E and Q), catalytic domain BN424_3487 PF02542 YgbB family BN424_3488 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BN424_349 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BN424_3490 PF18073 Rubredoxin metal binding domain BN424_3492 PF00255 Glutathione peroxidase BN424_3493 PF00005 ABC transporter BN424_3494 PF02687 FtsX-like permease family BN424_3495 PF17932 Tetracyclin repressor-like, C-terminal domain BN424_3495 PF00440 Bacterial regulatory proteins, tetR family BN424_3496 PF01979 Amidohydrolase family BN424_3497 PF13382 Adenine deaminase C-terminal domain BN424_3497 PF01979 Amidohydrolase family BN424_3499 PF00005 ABC transporter BN424_3499 PF08402 TOBE domain BN424_35 PF13460 NAD(P)H-binding BN424_3500 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3501 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3502 PF00512 His Kinase A (phospho-acceptor) domain BN424_3502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_3502 PF00672 HAMP domain BN424_3503 PF00072 Response regulator receiver domain BN424_3503 PF00486 Transcriptional regulatory protein, C terminal BN424_3504 PF02687 FtsX-like permease family BN424_3504 PF12704 MacB-like periplasmic core domain BN424_3505 PF00005 ABC transporter BN424_3509 PF00881 Nitroreductase family BN424_3510 PF02378 Phosphotransferase system, EIIC BN424_3510 PF00367 phosphotransferase system, EIIB BN424_3510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_3511 PF00232 Glycosyl hydrolase family 1 BN424_3512 PF12464 Maltose acetyltransferase BN424_3512 PF14602 Hexapeptide repeat of succinyl-transferase BN424_3514 PF03992 Antibiotic biosynthesis monooxygenase BN424_3517 PF01926 50S ribosome-binding GTPase BN424_3517 PF06071 Protein of unknown function (DUF933) BN424_3518 PF06107 Bacterial protein of unknown function (DUF951) BN424_3519 PF17762 HTH domain found in ParB protein BN424_3519 PF02195 ParB-like nuclease domain BN424_352 PF01594 AI-2E family transporter BN424_3520 PF13614 AAA domain BN424_3521 PF02195 ParB-like nuclease domain BN424_3521 PF17762 HTH domain found in ParB protein BN424_3522 PF02527 rRNA small subunit methyltransferase G BN424_3523 PF10127 RNA repair pathway DNA polymerase beta family BN424_3524 PF07690 Major Facilitator Superfamily BN424_3529 PF17936 Bacterial Ig domain BN424_3529 PF00149 Calcineurin-like phosphoesterase BN424_3529 PF02872 5'-nucleotidase, C-terminal domain BN424_353 PF01425 Amidase BN424_3532 PF13610 DDE domain BN424_3534 PF00689 Cation transporting ATPase, C-terminus BN424_3534 PF00690 Cation transporter/ATPase, N-terminus BN424_3535 PF02342 TerD domain BN424_3536 PF02342 TerD domain BN424_3537 PF02342 TerD domain BN424_3538 PF14266 Putative component of 'biosynthetic module' BN424_3539 PF05816 Toxic anion resistance protein (TelA) BN424_3548 PF00583 Acetyltransferase (GNAT) family BN424_3549 PF08818 Domain of unknown function (DU1801) BN424_3559 PF00872 Transposase, Mutator family BN424_3561 PF02796 Helix-turn-helix domain of resolvase BN424_3561 PF00239 Resolvase, N terminal domain BN424_3562 PF02796 Helix-turn-helix domain of resolvase BN424_3562 PF00239 Resolvase, N terminal domain BN424_3563 PF00561 alpha/beta hydrolase fold BN424_3564 PF00107 Zinc-binding dehydrogenase BN424_3564 PF08240 Alcohol dehydrogenase GroES-like domain BN424_3565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN424_3566 PF00106 short chain dehydrogenase BN424_3566 PF00561 alpha/beta hydrolase fold BN424_3567 PF00440 Bacterial regulatory proteins, tetR family BN424_3568 PF00251 Glycosyl hydrolases family 32 N-terminal domain BN424_3568 PF08244 Glycosyl hydrolases family 32 C terminal BN424_3569 PF01547 Bacterial extracellular solute-binding protein BN424_357 PF03591 AzlC protein BN424_3570 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3571 PF00528 Binding-protein-dependent transport system inner membrane component BN424_3572 PF00480 ROK family BN424_3573 PF00356 Bacterial regulatory proteins, lacI family BN424_3576 PF13932 GidA associated domain BN424_3576 PF01134 Glucose inhibited division protein A BN424_3577 PF10396 GTP-binding protein TrmE N-terminus BN424_3577 PF12631 MnmE helical domain BN424_3577 PF01926 50S ribosome-binding GTPase BN424_3588 PF00296 Luciferase-like monooxygenase BN424_3590 PF06081 Aromatic acid exporter family member 1 BN424_3593 PF00392 Bacterial regulatory proteins, gntR family BN424_3593 PF07702 UTRA domain BN424_3595 PF06100 MCRA family BN424_3596 PF00282 Pyridoxal-dependent decarboxylase conserved domain BN424_3598 PF13520 Amino acid permease BN424_3599 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BN424_36 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN424_360 PF01479 S4 domain BN424_360 PF00579 tRNA synthetases class I (W and Y) BN424_3600 PF00585 C-terminal regulatory domain of Threonine dehydratase BN424_3600 PF00291 Pyridoxal-phosphate dependent enzyme BN424_3601 PF00694 Aconitase C-terminal domain BN424_3602 PF00330 Aconitase family (aconitate hydratase) BN424_3603 PF00180 Isocitrate/isopropylmalate dehydrogenase BN424_3604 PF00682 HMGL-like BN424_3604 PF08502 LeuA allosteric (dimerisation) domain BN424_3605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BN424_3605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BN424_3606 PF01842 ACT domain BN424_3606 PF10369 Small subunit of acetolactate synthase BN424_3607 PF00205 Thiamine pyrophosphate enzyme, central domain BN424_3607 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN424_3607 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN424_3608 PF00920 Dehydratase family BN424_361 PF01479 S4 domain BN424_361 PF00579 tRNA synthetases class I (W and Y) BN424_3611 PF16657 Maltogenic Amylase, C-terminal domain BN424_3611 PF00128 Alpha amylase, catalytic domain BN424_3612 PF00367 phosphotransferase system, EIIB BN424_3612 PF02378 Phosphotransferase system, EIIC BN424_3617 PF00501 AMP-binding enzyme BN424_3617 PF13193 AMP-binding enzyme C-terminal domain BN424_362 PF01042 Endoribonuclease L-PSP BN424_3621 PF00005 ABC transporter BN424_3622 PF13732 Domain of unknown function (DUF4162) BN424_3622 PF00005 ABC transporter BN424_3625 PF00550 Phosphopantetheine attachment site BN424_3626 PF02733 Dak1 domain BN424_3628 PF00465 Iron-containing alcohol dehydrogenase BN424_3629 PF03610 PTS system fructose IIA component BN424_363 PF00155 Aminotransferase class I and II BN424_3630 PF02734 DAK2 domain BN424_3631 PF02733 Dak1 domain BN424_3635 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BN424_3636 PF13419 Haloacid dehalogenase-like hydrolase BN424_3637 PF13419 Haloacid dehalogenase-like hydrolase BN424_364 PF00367 phosphotransferase system, EIIB BN424_364 PF02378 Phosphotransferase system, EIIC BN424_3643 PF00550 Phosphopantetheine attachment site BN424_3643 PF00668 Condensation domain BN424_3643 PF13193 AMP-binding enzyme C-terminal domain BN424_3643 PF00501 AMP-binding enzyme BN424_365 PF01380 SIS domain BN424_365 PF01418 Helix-turn-helix domain, rpiR family BN424_3654 PF00561 alpha/beta hydrolase fold BN424_3657 PF02096 60Kd inner membrane protein BN424_3658 PF00825 Ribonuclease P BN424_3659 PF00468 Ribosomal protein L34 BN424_366 PF08240 Alcohol dehydrogenase GroES-like domain BN424_366 PF00107 Zinc-binding dehydrogenase BN424_367 PF00756 Putative esterase BN424_368 PF06486 Protein of unknown function (DUF1093) BN424_369 PF01323 DSBA-like thioredoxin domain BN424_371 PF13684 Dihydroxyacetone kinase family BN424_371 PF02734 DAK2 domain BN424_374 PF00230 Major intrinsic protein BN424_375 PF00877 NlpC/P60 family BN424_381 PF07155 ECF-type riboflavin transporter, S component BN424_382 PF12558 ATP-binding cassette cobalt transporter BN424_382 PF00005 ABC transporter BN424_386 PF00999 Sodium/hydrogen exchanger family BN424_388 PF00005 ABC transporter BN424_388 PF08402 TOBE domain BN424_389 PF00528 Binding-protein-dependent transport system inner membrane component BN424_390 PF00528 Binding-protein-dependent transport system inner membrane component BN424_391 PF13416 Bacterial extracellular solute-binding protein BN424_393 PF00892 EamA-like transporter family BN424_394 PF08544 GHMP kinases C terminal BN424_394 PF00288 GHMP kinases N terminal domain BN424_395 PF01979 Amidohydrolase family BN424_398 PF07859 alpha/beta hydrolase fold BN424_4 PF02463 RecF/RecN/SMC N terminal domain BN424_403 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_404 PF00528 Binding-protein-dependent transport system inner membrane component BN424_405 PF00005 ABC transporter BN424_406 PF01297 Zinc-uptake complex component A periplasmic BN424_406 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BN424_407 PF00005 ABC transporter BN424_408 PF00950 ABC 3 transport family BN424_409 PF00156 Phosphoribosyl transferase domain BN424_409 PF09182 Bacterial purine repressor, N-terminal BN424_41 PF00989 PAS fold BN424_41 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BN424_41 PF17203 Single cache domain 3 BN424_41 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_413 PF00528 Binding-protein-dependent transport system inner membrane component BN424_414 PF00528 Binding-protein-dependent transport system inner membrane component BN424_415 PF14310 Fibronectin type III-like domain BN424_415 PF00933 Glycosyl hydrolase family 3 N terminal domain BN424_415 PF01915 Glycosyl hydrolase family 3 C-terminal domain BN424_416 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BN424_417 PF00356 Bacterial regulatory proteins, lacI family BN424_418 PF00756 Putative esterase BN424_419 PF18416 N-acetylglucosamine binding protein domain 2 BN424_419 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BN424_42 PF00072 Response regulator receiver domain BN424_425 PF00005 ABC transporter BN424_426 PF00005 ABC transporter BN424_429 PF10662 Ethanolamine utilisation - propanediol utilisation BN424_430 PF01923 Cobalamin adenosyltransferase BN424_431 PF00465 Iron-containing alcohol dehydrogenase BN424_433 PF00936 BMC domain BN424_434 PF03861 ANTAR domain BN424_434 PF00072 Response regulator receiver domain BN424_435 PF07568 Histidine kinase BN424_435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_435 PF12282 Signal transduction histidine kinase BN424_436 PF06277 Ethanolamine utilisation protein EutA BN424_437 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BN424_438 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BN424_439 PF00936 BMC domain BN424_44 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN424_44 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN424_441 PF00465 Iron-containing alcohol dehydrogenase BN424_441 PF00171 Aldehyde dehydrogenase family BN424_442 PF00936 BMC domain BN424_444 PF06130 Phosphate propanoyltransferase BN424_446 PF03319 Ethanolamine utilisation protein EutN/carboxysome BN424_447 PF04346 Ethanolamine utilisation protein, EutH BN424_448 PF06249 Ethanolamine utilisation protein EutQ BN424_450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_451 PF10114 Sensory domain found in PocR BN424_451 PF12833 Helix-turn-helix domain BN424_452 PF00132 Bacterial transferase hexapeptide (six repeats) BN424_452 PF00483 Nucleotidyl transferase BN424_453 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BN424_453 PF14572 Phosphoribosyl synthetase-associated domain BN424_454 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_456 PF01546 Peptidase family M20/M25/M40 BN424_458 PF03466 LysR substrate binding domain BN424_458 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_460 PF07969 Amidohydrolase family BN424_462 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BN424_462 PF00056 lactate/malate dehydrogenase, NAD binding domain BN424_463 PF01195 Peptidyl-tRNA hydrolase BN424_464 PF00271 Helicase conserved C-terminal domain BN424_464 PF17757 UvrB interaction domain BN424_464 PF00270 DEAD/DEAH box helicase BN424_464 PF02559 CarD-like/TRCF domain BN424_464 PF03461 TRCF domain BN424_465 PF01943 Polysaccharide biosynthesis protein BN424_465 PF14667 Polysaccharide biosynthesis C-terminal domain BN424_466 PF03819 MazG nucleotide pyrophosphohydrolase domain BN424_466 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BN424_467 PF01479 S4 domain BN424_469 PF00575 S1 RNA binding domain BN424_470 PF01171 PP-loop family BN424_470 PF11734 TilS substrate C-terminal domain BN424_471 PF11734 TilS substrate C-terminal domain BN424_471 PF01171 PP-loop family BN424_471 PF00156 Phosphoribosyl transferase domain BN424_472 PF01434 Peptidase family M41 BN424_472 PF17862 AAA+ lid domain BN424_472 PF00004 ATPase family associated with various cellular activities (AAA) BN424_472 PF06480 FtsH Extracellular BN424_473 PF01430 Hsp33 protein BN424_474 PF00291 Pyridoxal-phosphate dependent enzyme BN424_475 PF01207 Dihydrouridine synthase (Dus) BN424_476 PF01336 OB-fold nucleic acid binding domain BN424_476 PF00152 tRNA synthetases class II (D, K and N) BN424_48 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_48 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN424_488 PF00654 Voltage gated chloride channel BN424_489 PF01497 Periplasmic binding protein BN424_489 PF12833 Helix-turn-helix domain BN424_490 PF00005 ABC transporter BN424_490 PF00664 ABC transporter transmembrane region BN424_491 PF00664 ABC transporter transmembrane region BN424_491 PF00005 ABC transporter BN424_493 PF00313 'Cold-shock' DNA-binding domain BN424_496 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN424_496 PF00205 Thiamine pyrophosphate enzyme, central domain BN424_496 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN424_497 PF00990 Diguanylate cyclase, GGDEF domain BN424_5 PF00986 DNA gyrase B subunit, carboxyl terminus BN424_5 PF01751 Toprim domain BN424_5 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_5 PF00204 DNA gyrase B BN424_50 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN424_50 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN424_500 PF00356 Bacterial regulatory proteins, lacI family BN424_500 PF13407 Periplasmic binding protein domain BN424_501 PF00367 phosphotransferase system, EIIB BN424_501 PF02378 Phosphotransferase system, EIIC BN424_502 PF08244 Glycosyl hydrolases family 32 C terminal BN424_502 PF00251 Glycosyl hydrolases family 32 N-terminal domain BN424_503 PF00251 Glycosyl hydrolases family 32 N-terminal domain BN424_503 PF08244 Glycosyl hydrolases family 32 C terminal BN424_504 PF00710 Asparaginase, N-terminal BN424_504 PF17763 Glutaminase/Asparaginase C-terminal domain BN424_505 PF04204 Homoserine O-succinyltransferase BN424_506 PF01053 Cys/Met metabolism PLP-dependent enzyme BN424_508 PF03880 DbpA RNA binding domain BN424_508 PF00270 DEAD/DEAH box helicase BN424_508 PF00271 Helicase conserved C-terminal domain BN424_509 PF12848 ABC transporter BN424_509 PF00005 ABC transporter BN424_51 PF01266 FAD dependent oxidoreductase BN424_51 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BN424_511 PF00149 Calcineurin-like phosphoesterase BN424_511 PF02872 5'-nucleotidase, C-terminal domain BN424_516 PF00005 ABC transporter BN424_516 PF08402 TOBE domain BN424_517 PF00528 Binding-protein-dependent transport system inner membrane component BN424_518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_518 PF06580 Histidine kinase BN424_520 PF13520 Amino acid permease BN424_521 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN424_521 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN424_522 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN424_523 PF00528 Binding-protein-dependent transport system inner membrane component BN424_524 PF00356 Bacterial regulatory proteins, lacI family BN424_525 PF05525 Branched-chain amino acid transport protein BN424_526 PF07739 TipAS antibiotic-recognition domain BN424_526 PF13411 MerR HTH family regulatory protein BN424_527 PF03358 NADPH-dependent FMN reductase BN424_531 PF00005 ABC transporter BN424_531 PF00664 ABC transporter transmembrane region BN424_532 PF00664 ABC transporter transmembrane region BN424_532 PF00005 ABC transporter BN424_535 PF07501 G5 domain BN424_535 PF06725 3D domain BN424_535 PF03990 G5-linked-Ubiquitin-like domain BN424_537 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BN424_537 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BN424_538 PF00232 Glycosyl hydrolase family 1 BN424_539 PF09370 Phosphoenolpyruvate hydrolase-like BN424_54 PF00230 Major intrinsic protein BN424_541 PF09370 Phosphoenolpyruvate hydrolase-like BN424_543 PF00356 Bacterial regulatory proteins, lacI family BN424_544 PF01541 GIY-YIG catalytic domain BN424_544 PF02151 UvrB/uvrC motif BN424_544 PF08459 UvrC Helix-hairpin-helix N-terminal BN424_546 PF00005 ABC transporter BN424_547 PF00528 Binding-protein-dependent transport system inner membrane component BN424_548 PF00440 Bacterial regulatory proteins, tetR family BN424_548 PF17934 Tetracyclin repressor-like, C-terminal domain BN424_55 PF02664 S-Ribosylhomocysteinase (LuxS) BN424_551 PF08241 Methyltransferase domain BN424_552 PF08543 Phosphomethylpyrimidine kinase BN424_554 PF07729 FCD domain BN424_554 PF00392 Bacterial regulatory proteins, gntR family BN424_555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN424_555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BN424_556 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN424_556 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN424_557 PF02447 GntP family permease BN424_558 PF03167 Uracil DNA glycosylase superfamily BN424_559 PF01515 Phosphate acetyl/butaryl transferase BN424_56 PF13649 Methyltransferase domain BN424_564 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BN424_57 PF01053 Cys/Met metabolism PLP-dependent enzyme BN424_570 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BN424_570 PF01297 Zinc-uptake complex component A periplasmic BN424_571 PF00471 Ribosomal protein L33 BN424_572 PF00253 Ribosomal protein S14p/S29e BN424_575 PF09335 SNARE associated Golgi protein BN424_577 PF04203 Sortase domain BN424_579 PF00210 Ferritin-like domain BN424_58 PF00291 Pyridoxal-phosphate dependent enzyme BN424_580 PF04011 LemA family BN424_581 PF01435 Peptidase family M48 BN424_583 PF00893 Small Multidrug Resistance protein BN424_584 PF00893 Small Multidrug Resistance protein BN424_585 PF07478 D-ala D-ala ligase C-terminus BN424_585 PF01820 D-ala D-ala ligase N-terminus BN424_587 PF01225 Mur ligase family, catalytic domain BN424_587 PF02875 Mur ligase family, glutamate ligase domain BN424_587 PF08245 Mur ligase middle domain BN424_588 PF01027 Inhibitor of apoptosis-promoting Bax1 BN424_589 PF00270 DEAD/DEAH box helicase BN424_589 PF00271 Helicase conserved C-terminal domain BN424_590 PF01648 4'-phosphopantetheinyl transferase superfamily BN424_591 PF01168 Alanine racemase, N-terminal domain BN424_591 PF00842 Alanine racemase, C-terminal domain BN424_595 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BN424_596 PF06177 QueT transporter BN424_6 PF00521 DNA gyrase/topoisomerase IV, subunit A BN424_6 PF03989 DNA gyrase C-terminal domain, beta-propeller BN424_608 PF14542 GCN5-related N-acetyl-transferase BN424_609 PF13520 Amino acid permease BN424_61 PF03819 MazG nucleotide pyrophosphohydrolase domain BN424_613 PF01546 Peptidase family M20/M25/M40 BN424_613 PF07687 Peptidase dimerisation domain BN424_614 PF00232 Glycosyl hydrolase family 1 BN424_615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BN424_615 PF00056 lactate/malate dehydrogenase, NAD binding domain BN424_621 PF02457 DisA bacterial checkpoint controller nucleotide-binding BN424_623 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN424_623 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN424_623 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN424_623 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN424_624 PF01380 SIS domain BN424_626 PF00990 Diguanylate cyclase, GGDEF domain BN424_626 PF07694 5TMR of 5TMR-LYT BN424_627 PF00375 Sodium:dicarboxylate symporter family BN424_628 PF00005 ABC transporter BN424_63 PF00107 Zinc-binding dehydrogenase BN424_63 PF08240 Alcohol dehydrogenase GroES-like domain BN424_630 PF12704 MacB-like periplasmic core domain BN424_630 PF02687 FtsX-like permease family BN424_631 PF00005 ABC transporter BN424_632 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN424_634 PF00999 Sodium/hydrogen exchanger family BN424_635 PF17674 HHH domain BN424_635 PF16921 Tex protein YqgF-like domain BN424_635 PF09371 Tex-like protein N-terminal domain BN424_635 PF00575 S1 RNA binding domain BN424_637 PF10263 SprT-like family BN424_639 PF10502 Signal peptidase, peptidase S26 BN424_64 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_641 PF02638 Glycosyl hydrolase-like 10 BN424_642 PF13580 SIS domain BN424_644 PF02378 Phosphotransferase system, EIIC BN424_646 PF01869 BadF/BadG/BcrA/BcrD ATPase family BN424_649 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BN424_65 PF03123 CAT RNA binding domain BN424_65 PF00874 PRD domain BN424_650 PF03702 Anhydro-N-acetylmuramic acid kinase BN424_651 PF01380 SIS domain BN424_651 PF01418 Helix-turn-helix domain, rpiR family BN424_654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_654 PF03466 LysR substrate binding domain BN424_656 PF03009 Glycerophosphoryl diester phosphodiesterase family BN424_657 PF00664 ABC transporter transmembrane region BN424_657 PF00005 ABC transporter BN424_658 PF00664 ABC transporter transmembrane region BN424_658 PF00005 ABC transporter BN424_659 PF00877 NlpC/P60 family BN424_660 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BN424_660 PF13457 GW (Gly-Tryp) dipeptide domain BN424_661 PF03814 Potassium-transporting ATPase A subunit BN424_664 PF02669 K+-transporting ATPase, c chain BN424_665 PF02702 Osmosensitive K+ channel His kinase sensor domain BN424_665 PF13493 Domain of unknown function (DUF4118) BN424_665 PF00512 His Kinase A (phospho-acceptor) domain BN424_665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_666 PF00072 Response regulator receiver domain BN424_666 PF00486 Transcriptional regulatory protein, C terminal BN424_667 PF02660 Glycerol-3-phosphate acyltransferase BN424_668 PF00144 Beta-lactamase BN424_669 PF02082 Transcriptional regulator BN424_67 PF00072 Response regulator receiver domain BN424_67 PF00486 Transcriptional regulatory protein, C terminal BN424_671 PF00403 Heavy-metal-associated domain BN424_673 PF07690 Major Facilitator Superfamily BN424_676 PF00132 Bacterial transferase hexapeptide (six repeats) BN424_68 PF00672 HAMP domain BN424_68 PF00512 His Kinase A (phospho-acceptor) domain BN424_68 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_68 PF13426 PAS domain BN424_680 PF00696 Amino acid kinase family BN424_680 PF13840 ACT domain BN424_688 PF13580 SIS domain BN424_689 PF00367 phosphotransferase system, EIIB BN424_689 PF02378 Phosphotransferase system, EIIC BN424_690 PF00282 Pyridoxal-dependent decarboxylase conserved domain BN424_691 PF02673 Bacitracin resistance protein BacA BN424_692 PF03601 Conserved hypothetical protein 698 BN424_694 PF03129 Anticodon binding domain BN424_694 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN424_694 PF02824 TGS domain BN424_694 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN424_695 PF03129 Anticodon binding domain BN424_695 PF02824 TGS domain BN424_695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN424_695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN424_696 PF03129 Anticodon binding domain BN424_696 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN424_696 PF02824 TGS domain BN424_699 PF06719 AraC-type transcriptional regulator N-terminus BN424_699 PF12833 Helix-turn-helix domain BN424_7 PF01250 Ribosomal protein S6 BN424_700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_701 PF00583 Acetyltransferase (GNAT) family BN424_705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_71 PF00753 Metallo-beta-lactamase superfamily BN424_714 PF00480 ROK family BN424_715 PF01418 Helix-turn-helix domain, rpiR family BN424_715 PF01380 SIS domain BN424_716 PF02378 Phosphotransferase system, EIIC BN424_717 PF00232 Glycosyl hydrolase family 1 BN424_718 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) BN424_72 PF13180 PDZ domain BN424_720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN424_721 PF02378 Phosphotransferase system, EIIC BN424_721 PF00367 phosphotransferase system, EIIB BN424_722 PF02056 Family 4 glycosyl hydrolase BN424_722 PF11975 Family 4 glycosyl hydrolase C-terminal domain BN424_723 PF01418 Helix-turn-helix domain, rpiR family BN424_723 PF01380 SIS domain BN424_725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_725 PF00367 phosphotransferase system, EIIB BN424_725 PF02378 Phosphotransferase system, EIIC BN424_726 PF13419 Haloacid dehalogenase-like hydrolase BN424_727 PF12708 Pectate lyase superfamily protein BN424_727 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BN424_733 PF00561 alpha/beta hydrolase fold BN424_735 PF00884 Sulfatase BN424_736 PF11700 Vacuole effluxer Atg22 like BN424_737 PF01139 tRNA-splicing ligase RtcB BN424_738 PF00881 Nitroreductase family BN424_739 PF00872 Transposase, Mutator family BN424_74 PF02590 Predicted SPOUT methyltransferase BN424_744 PF00072 Response regulator receiver domain BN424_744 PF04397 LytTr DNA-binding domain BN424_749 PF00893 Small Multidrug Resistance protein BN424_750 PF00893 Small Multidrug Resistance protein BN424_751 PF17755 UvrA DNA-binding domain BN424_751 PF00005 ABC transporter BN424_751 PF17760 UvrA interaction domain BN424_752 PF00005 ABC transporter BN424_752 PF00664 ABC transporter transmembrane region BN424_754 PF03707 Bacterial signalling protein N terminal repeat BN424_754 PF00563 EAL domain BN424_754 PF00990 Diguanylate cyclase, GGDEF domain BN424_755 PF01613 Flavin reductase like domain BN424_756 PF01738 Dienelactone hydrolase family BN424_757 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_758 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_759 PF10282 Lactonase, 7-bladed beta-propeller BN424_760 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BN424_763 PF01594 AI-2E family transporter BN424_764 PF02525 Flavodoxin-like fold BN424_766 PF00664 ABC transporter transmembrane region BN424_766 PF00005 ABC transporter BN424_767 PF00664 ABC transporter transmembrane region BN424_767 PF00005 ABC transporter BN424_769 PF06998 Protein of unknown function (DUF1307) BN424_770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_771 PF00557 Metallopeptidase family M24 BN424_772 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BN424_772 PF00056 lactate/malate dehydrogenase, NAD binding domain BN424_776 PF01238 Phosphomannose isomerase type I BN424_777 PF07943 Penicillin-binding protein 5, C-terminal domain BN424_777 PF00768 D-alanyl-D-alanine carboxypeptidase BN424_778 PF07685 CobB/CobQ-like glutamine amidotransferase domain BN424_779 PF08353 Domain of unknown function (DUF1727) BN424_779 PF08245 Mur ligase middle domain BN424_781 PF00265 Thymidine kinase BN424_782 PF00472 RF-1 domain BN424_782 PF03462 PCRF domain BN424_783 PF17827 PrmC N-terminal domain BN424_783 PF05175 Methyltransferase small domain BN424_784 PF03481 Putative GTP-binding controlling metal-binding BN424_784 PF01300 Telomere recombination BN424_785 PF00464 Serine hydroxymethyltransferase BN424_787 PF00119 ATP synthase A chain BN424_788 PF00137 ATP synthase subunit C BN424_789 PF00430 ATP synthase B/B' CF(0) BN424_790 PF00213 ATP synthase delta (OSCP) subunit BN424_791 PF00306 ATP synthase alpha/beta chain, C terminal domain BN424_791 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN424_791 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN424_792 PF00231 ATP synthase BN424_793 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN424_793 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN424_794 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BN424_794 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BN424_795 PF06612 Protein of unknown function (DUF1146) BN424_796 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN424_799 PF00436 Single-strand binding protein family BN424_8 PF00436 Single-strand binding protein family BN424_800 PF01476 LysM domain BN424_800 PF06725 3D domain BN424_801 PF00486 Transcriptional regulatory protein, C terminal BN424_801 PF00072 Response regulator receiver domain BN424_802 PF00512 His Kinase A (phospho-acceptor) domain BN424_802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN424_802 PF00672 HAMP domain BN424_805 PF00884 Sulfatase BN424_807 PF07690 Major Facilitator Superfamily BN424_808 PF17785 PUA-like domain BN424_808 PF10672 S-adenosylmethionine-dependent methyltransferase BN424_809 PF02687 FtsX-like permease family BN424_809 PF12704 MacB-like periplasmic core domain BN424_810 PF00005 ABC transporter BN424_811 PF01791 DeoC/LacD family aldolase BN424_812 PF04073 Aminoacyl-tRNA editing domain BN424_816 PF06800 Sugar transport protein BN424_817 PF13520 Amino acid permease BN424_820 PF00005 ABC transporter BN424_821 PF02687 FtsX-like permease family BN424_821 PF12704 MacB-like periplasmic core domain BN424_822 PF01202 Shikimate kinase BN424_824 PF01145 SPFH domain / Band 7 family BN424_824 PF15975 Flotillin BN424_827 PF11728 Putative aromatic acid exporter C-terminal domain BN424_827 PF06081 Aromatic acid exporter family member 1 BN424_828 PF13458 Periplasmic binding protein BN424_829 PF02653 Branched-chain amino acid transport system / permease component BN424_830 PF11862 Domain of unknown function (DUF3382) BN424_830 PF02653 Branched-chain amino acid transport system / permease component BN424_831 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN424_831 PF00005 ABC transporter BN424_832 PF00005 ABC transporter BN424_837 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN424_838 PF01594 AI-2E family transporter BN424_840 PF02557 D-alanyl-D-alanine carboxypeptidase BN424_842 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BN424_842 PF13457 GW (Gly-Tryp) dipeptide domain BN424_844 PF00905 Penicillin binding protein transpeptidase domain BN424_844 PF03717 Penicillin-binding Protein dimerisation domain BN424_844 PF05223 NTF2-like N-terminal transpeptidase domain BN424_846 PF00392 Bacterial regulatory proteins, gntR family BN424_846 PF07702 UTRA domain BN424_848 PF00860 Permease family BN424_851 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN424_852 PF00731 AIR carboxylase BN424_853 PF02222 ATP-grasp domain BN424_853 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BN424_854 PF00206 Lyase BN424_854 PF10397 Adenylosuccinate lyase C-terminus BN424_855 PF00375 Sodium:dicarboxylate symporter family BN424_856 PF02954 Bacterial regulatory protein, Fis family BN424_856 PF00158 Sigma-54 interaction domain BN424_856 PF01590 GAF domain BN424_857 PF01144 Coenzyme A transferase BN424_858 PF07690 Major Facilitator Superfamily BN424_859 PF03060 Nitronate monooxygenase BN424_86 PF04002 RadC-like JAB domain BN424_860 PF00221 Aromatic amino acid lyase BN424_861 PF00221 Aromatic amino acid lyase BN424_866 PF05675 Protein of unknown function (DUF817) BN424_868 PF00266 Aminotransferase class-V BN424_869 PF00266 Aminotransferase class-V BN424_870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN424_870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN424_870 PF01842 ACT domain BN424_873 PF03840 Preprotein translocase SecG subunit BN424_874 PF12146 Serine aminopeptidase, S33 BN424_875 PF17876 Cold shock domain BN424_875 PF08206 Ribonuclease B OB domain BN424_875 PF00773 RNB domain BN424_875 PF00575 S1 RNA binding domain BN424_876 PF01668 SmpB protein BN424_877 PF00232 Glycosyl hydrolase family 1 BN424_879 PF00072 Response regulator receiver domain BN424_879 PF04397 LytTr DNA-binding domain BN424_880 PF01098 Cell cycle protein BN424_881 PF01098 Cell cycle protein BN424_884 PF00872 Transposase, Mutator family BN424_887 PF08279 HTH domain BN424_887 PF05043 Mga helix-turn-helix domain BN424_887 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN424_887 PF00874 PRD domain BN424_888 PF00392 Bacterial regulatory proteins, gntR family BN424_888 PF07702 UTRA domain BN424_890 PF06874 Firmicute fructose-1,6-bisphosphatase BN424_893 PF01654 Cytochrome bd terminal oxidase subunit I BN424_894 PF02322 Cytochrome bd terminal oxidase subunit II BN424_895 PF00005 ABC transporter BN424_895 PF00664 ABC transporter transmembrane region BN424_896 PF00005 ABC transporter BN424_896 PF00664 ABC transporter transmembrane region BN424_898 PF16360 GTP-binding GTPase Middle Region BN424_898 PF01926 50S ribosome-binding GTPase BN424_898 PF13167 GTP-binding GTPase N-terminal BN424_9 PF01084 Ribosomal protein S18 BN424_905 PF00348 Polyprenyl synthetase BN424_908 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN424_910 PF00300 Histidine phosphatase superfamily (branch 1) BN424_911 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BN424_912 PF08951 Enterocin A Immunity BN424_913 PF03466 LysR substrate binding domain BN424_913 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN424_914 PF00132 Bacterial transferase hexapeptide (six repeats) BN424_914 PF12464 Maltose acetyltransferase BN424_916 PF00106 short chain dehydrogenase BN424_918 PF00248 Aldo/keto reductase family BN424_92 PF00239 Resolvase, N terminal domain BN424_92 PF02796 Helix-turn-helix domain of resolvase BN424_920 PF02627 Carboxymuconolactone decarboxylase family BN424_921 PF13411 MerR HTH family regulatory protein BN424_922 PF01418 Helix-turn-helix domain, rpiR family BN424_922 PF01380 SIS domain BN424_923 PF00367 phosphotransferase system, EIIB BN424_923 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_923 PF02378 Phosphotransferase system, EIIC BN424_924 PF00232 Glycosyl hydrolase family 1 BN424_927 PF00872 Transposase, Mutator family BN424_929 PF00005 ABC transporter BN424_929 PF12848 ABC transporter BN424_931 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN424_932 PF13411 MerR HTH family regulatory protein BN424_933 PF02293 AmiS/UreI family transporter BN424_938 PF00248 Aldo/keto reductase family BN424_942 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BN424_942 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BN424_944 PF03631 Virulence factor BrkB BN424_945 PF13520 Amino acid permease BN424_948 PF01098 Cell cycle protein BN424_949 PF03960 ArsC family BN424_951 PF01597 Glycine cleavage H-protein BN424_952 PF00005 ABC transporter BN424_952 PF09383 NIL domain BN424_953 PF00528 Binding-protein-dependent transport system inner membrane component BN424_954 PF03180 NLPA lipoprotein BN424_955 PF00072 Response regulator receiver domain BN424_955 PF04397 LytTr DNA-binding domain BN424_958 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_962 PF07722 Peptidase C26 BN424_963 PF00005 ABC transporter BN424_964 PF01458 Uncharacterized protein family (UPF0051) BN424_965 PF00266 Aminotransferase class-V BN424_966 PF01592 NifU-like N terminal domain BN424_967 PF01458 Uncharacterized protein family (UPF0051) BN424_972 PF00005 ABC transporter BN424_972 PF17755 UvrA DNA-binding domain BN424_972 PF17760 UvrA interaction domain BN424_973 PF00005 ABC transporter BN424_973 PF17760 UvrA interaction domain BN424_973 PF17755 UvrA DNA-binding domain BN424_975 PF00874 PRD domain BN424_975 PF03123 CAT RNA binding domain BN424_976 PF02378 Phosphotransferase system, EIIC BN424_976 PF00367 phosphotransferase system, EIIB BN424_976 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN424_977 PF00232 Glycosyl hydrolase family 1 BN424_978 PF00392 Bacterial regulatory proteins, gntR family BN424_978 PF07702 UTRA domain BN424_981 PF03830 PTS system sorbose subfamily IIB component BN424_982 PF03609 PTS system sorbose-specific iic component BN424_983 PF03613 PTS system mannose/fructose/sorbose family IID component BN424_985 PF00583 Acetyltransferase (GNAT) family BN424_986 PF01416 tRNA pseudouridine synthase BN424_988 PF13545 Crp-like helix-turn-helix domain BN424_988 PF00027 Cyclic nucleotide-binding domain BN424_990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN424_993 PF12833 Helix-turn-helix domain BN424_993 PF02805 Metal binding domain of Ada BN424_994 PF01915 Glycosyl hydrolase family 3 C-terminal domain BN424_994 PF14310 Fibronectin type III-like domain BN424_994 PF00933 Glycosyl hydrolase family 3 N terminal domain BN424_997 PF03358 NADPH-dependent FMN reductase