locus-tag class description Chro_0001 PF08299 Bacterial dnaA protein helix-turn-helix Chro_0001 PF11638 DnaA N-terminal domain Chro_0001 PF00308 Bacterial dnaA protein Chro_0003 PF03109 ABC1 family Chro_0005 PF02633 Creatinine amidohydrolase Chro_0006 PF01081 KDPG and KHG aldolase Chro_0012 PF01739 CheR methyltransferase, SAM binding domain Chro_0013 PF01925 Sulfite exporter TauE/SafE Chro_0014 PF00072 Response regulator receiver domain Chro_0015 PF01584 CheW-like domain Chro_0016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0016 PF00072 Response regulator receiver domain Chro_0016 PF01584 CheW-like domain Chro_0016 PF01627 Hpt domain Chro_0017 PF02743 Cache domain Chro_0017 PF00672 HAMP domain Chro_0017 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_0018 PF01339 CheB methylesterase Chro_0018 PF00072 Response regulator receiver domain Chro_0019 PF01339 CheB methylesterase Chro_0019 PF00072 Response regulator receiver domain Chro_0021 PF01521 Iron-sulphur cluster biosynthesis Chro_0025 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) Chro_0027 PF00005 ABC transporter Chro_0028 PF17782 DprA winged helix domain Chro_0028 PF02481 DNA recombination-mediator protein A Chro_0036 PF07670 Nucleoside recognition Chro_0036 PF07664 Ferrous iron transport protein B C terminus Chro_0036 PF17910 FeoB cytosolic helical domain Chro_0036 PF02421 Ferrous iron transport protein B Chro_0037 PF04023 FeoA domain Chro_0037 PF07664 Ferrous iron transport protein B C terminus Chro_0037 PF17910 FeoB cytosolic helical domain Chro_0037 PF02421 Ferrous iron transport protein B Chro_0037 PF07670 Nucleoside recognition Chro_0041 PF02540 NAD synthase Chro_0041 PF00795 Carbon-nitrogen hydrolase Chro_0042 PF01070 FMN-dependent dehydrogenase Chro_0043 PF01817 Chorismate mutase type II Chro_0045 PF01467 Cytidylyltransferase-like Chro_0046 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Chro_0046 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Chro_0048 PF00633 Helix-hairpin-helix motif Chro_0048 PF04002 RadC-like JAB domain Chro_0049 PF00485 Phosphoribulokinase / Uridine kinase family Chro_0050 PF03717 Penicillin-binding Protein dimerisation domain Chro_0050 PF00905 Penicillin binding protein transpeptidase domain Chro_0055 PF00583 Acetyltransferase (GNAT) family Chro_0058 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Chro_0058 PF00361 Proton-conducting membrane transporter Chro_0058 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Chro_0059 PF00361 Proton-conducting membrane transporter Chro_0059 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Chro_0064 PF01106 NifU-like domain Chro_0066 PF00512 His Kinase A (phospho-acceptor) domain Chro_0066 PF00672 HAMP domain Chro_0066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0066 PF00072 Response regulator receiver domain Chro_0066 PF01627 Hpt domain Chro_0066 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_0068 PF03144 Elongation factor Tu domain 2 Chro_0068 PF06421 GTP-binding protein LepA C-terminus Chro_0068 PF00679 Elongation factor G C-terminus Chro_0068 PF00009 Elongation factor Tu GTP binding domain Chro_0073 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Chro_0076 PF03459 TOBE domain Chro_0076 PF17912 MalK OB fold domain Chro_0076 PF00005 ABC transporter Chro_0077 PF00005 ABC transporter Chro_0077 PF00664 ABC transporter transmembrane region Chro_0078 PF00550 Phosphopantetheine attachment site Chro_0078 PF07993 Male sterility protein Chro_0078 PF00668 Condensation domain Chro_0078 PF00501 AMP-binding enzyme Chro_0078 PF13193 AMP-binding enzyme C-terminal domain Chro_0083 PF13180 PDZ domain Chro_0084 PF13180 PDZ domain Chro_0085 PF00196 Bacterial regulatory proteins, luxR family Chro_0085 PF00072 Response regulator receiver domain Chro_0088 PF00248 Aldo/keto reductase family Chro_0091 PF02374 Anion-transporting ATPase Chro_0091 PF17886 HSP20-like domain found in ArsA Chro_0092 PF02767 DNA polymerase III beta subunit, central domain Chro_0092 PF00712 DNA polymerase III beta subunit, N-terminal domain Chro_0092 PF02768 DNA polymerase III beta subunit, C-terminal domain Chro_0093 PF01063 Amino-transferase class IV Chro_0095 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_0095 PF14602 Hexapeptide repeat of succinyl-transferase Chro_0095 PF12464 Maltose acetyltransferase Chro_0096 PF01370 NAD dependent epimerase/dehydratase family Chro_0097 PF00672 HAMP domain Chro_0097 PF00512 His Kinase A (phospho-acceptor) domain Chro_0097 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0098 PF00072 Response regulator receiver domain Chro_0098 PF00486 Transcriptional regulatory protein, C terminal Chro_0099 PF04101 Glycosyltransferase family 28 C-terminal domain Chro_0099 PF03033 Glycosyltransferase family 28 N-terminal domain Chro_0100 PF04101 Glycosyltransferase family 28 C-terminal domain Chro_0101 PF00005 ABC transporter Chro_0101 PF00664 ABC transporter transmembrane region Chro_0102 PF00300 Histidine phosphatase superfamily (branch 1) Chro_0103 PF00534 Glycosyl transferases group 1 Chro_0103 PF13439 Glycosyltransferase Family 4 Chro_0104 PF00534 Glycosyl transferases group 1 Chro_0105 PF00535 Glycosyl transferase family 2 Chro_0107 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Chro_0108 PF07465 Photosystem I protein M (PsaM) Chro_0112 PF02798 Glutathione S-transferase, N-terminal domain Chro_0112 PF00043 Glutathione S-transferase, C-terminal domain Chro_0113 PF02533 Photosystem II 4 kDa reaction centre component Chro_0114 PF00487 Fatty acid desaturase Chro_0115 PF00583 Acetyltransferase (GNAT) family Chro_0116 PF00005 ABC transporter Chro_0116 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Chro_0118 PF06039 Malate:quinone oxidoreductase (Mqo) Chro_0119 PF00072 Response regulator receiver domain Chro_0119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0119 PF01584 CheW-like domain Chro_0119 PF01627 Hpt domain Chro_0120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_0120 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Chro_0122 PF00072 Response regulator receiver domain Chro_0122 PF00486 Transcriptional regulatory protein, C terminal Chro_0123 PF00072 Response regulator receiver domain Chro_0125 PF09179 TilS substrate binding domain Chro_0125 PF01171 PP-loop family Chro_0126 PF01578 Cytochrome C assembly protein Chro_0128 PF00005 ABC transporter Chro_0129 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0130 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0131 PF12849 PBP superfamily domain Chro_0132 PF02632 BioY family Chro_0135 PF17092 Penicillin-binding protein OB-like domain Chro_0135 PF00905 Penicillin binding protein transpeptidase domain Chro_0135 PF00912 Transglycosylase Chro_0140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Chro_0141 PF02687 FtsX-like permease family Chro_0141 PF00005 ABC transporter Chro_0141 PF12704 MacB-like periplasmic core domain Chro_0142 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Chro_0143 PF12704 MacB-like periplasmic core domain Chro_0143 PF00005 ABC transporter Chro_0143 PF02687 FtsX-like permease family Chro_0144 PF00005 ABC transporter Chro_0148 PF01047 MarR family Chro_0151 PF13649 Methyltransferase domain Chro_0152 PF00534 Glycosyl transferases group 1 Chro_0153 PF00535 Glycosyl transferase family 2 Chro_0154 PF00266 Aminotransferase class-V Chro_0155 PF00145 C-5 cytosine-specific DNA methylase Chro_0157 PF02565 Recombination protein O C terminal Chro_0157 PF11967 Recombination protein O N terminal Chro_0159 PF00534 Glycosyl transferases group 1 Chro_0159 PF13439 Glycosyltransferase Family 4 Chro_0161 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Chro_0161 PF01676 Metalloenzyme superfamily Chro_0162 PF12848 ABC transporter Chro_0162 PF16326 ABC transporter C-terminal domain Chro_0162 PF00005 ABC transporter Chro_0167 PF01197 Ribosomal protein L31 Chro_0169 PF00572 Ribosomal protein L13 Chro_0170 PF01416 tRNA pseudouridine synthase Chro_0178 PF00344 SecY translocase Chro_0179 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Chro_0181 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Chro_0183 PF00410 Ribosomal protein S8 Chro_0184 PF00281 Ribosomal protein L5 Chro_0184 PF00673 ribosomal L5P family C-terminus Chro_0185 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Chro_0185 PF00467 KOW motif Chro_0186 PF00238 Ribosomal protein L14p/L23e Chro_0189 PF00252 Ribosomal protein L16p/L10e Chro_0190 PF00189 Ribosomal protein S3, C-terminal domain Chro_0190 PF07650 KH domain Chro_0193 PF00181 Ribosomal Proteins L2, RNA binding domain Chro_0193 PF03947 Ribosomal Proteins L2, C-terminal domain Chro_0194 PF00276 Ribosomal protein L23 Chro_0195 PF00573 Ribosomal protein L4/L1 family Chro_0197 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N Chro_0203 PF00106 short chain dehydrogenase Chro_0205 PF01479 S4 domain Chro_0205 PF00849 RNA pseudouridylate synthase Chro_0208 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_0211 PF00202 Aminotransferase class-III Chro_0212 PF01432 Peptidase family M3 Chro_0214 PF07194 P2 response regulator binding domain Chro_0214 PF02895 Signal transducing histidine kinase, homodimeric domain Chro_0214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0214 PF01627 Hpt domain Chro_0214 PF07194 P2 response regulator binding domain Chro_0214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0214 PF02895 Signal transducing histidine kinase, homodimeric domain Chro_0214 PF01584 CheW-like domain Chro_0214 PF01584 CheW-like domain Chro_0214 PF01627 Hpt domain Chro_0215 PF01590 GAF domain Chro_0215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_0216 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_0216 PF01590 GAF domain Chro_0217 PF01584 CheW-like domain Chro_0218 PF00072 Response regulator receiver domain Chro_0219 PF14332 Domain of unknown function (DUF4388) Chro_0219 PF00072 Response regulator receiver domain Chro_0220 PF00483 Nucleotidyl transferase Chro_0221 PF01266 FAD dependent oxidoreductase Chro_0222 PF16363 GDP-mannose 4,6 dehydratase Chro_0223 PF08421 Putative zinc binding domain Chro_0223 PF08484 C-methyltransferase C-terminal domain Chro_0224 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Chro_0226 PF16221 winged helix-turn-helix Chro_0226 PF16254 Domain of unknown function (DUF4910) Chro_0226 PF09940 Domain of unknown function (DUF2172) Chro_0227 PF01370 NAD dependent epimerase/dehydratase family Chro_0231 PF00534 Glycosyl transferases group 1 Chro_0235 PF00535 Glycosyl transferase family 2 Chro_0238 PF00534 Glycosyl transferases group 1 Chro_0238 PF13439 Glycosyltransferase Family 4 Chro_0242 PF02092 Glycyl-tRNA synthetase beta subunit Chro_0248 PF01138 3' exoribonuclease family, domain 1 Chro_0248 PF03725 3' exoribonuclease family, domain 2 Chro_0249 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Chro_0250 PF01339 CheB methylesterase Chro_0250 PF01739 CheR methyltransferase, SAM binding domain Chro_0250 PF03705 CheR methyltransferase, all-alpha domain Chro_0250 PF08448 PAS fold Chro_0252 PF04542 Sigma-70 region 2 Chro_0252 PF04539 Sigma-70 region 3 Chro_0252 PF00140 Sigma-70 factor, region 1.2 Chro_0252 PF04545 Sigma-70, region 4 Chro_0253 PF01475 Ferric uptake regulator family Chro_0255 PF17862 AAA+ lid domain Chro_0255 PF06480 FtsH Extracellular Chro_0255 PF00004 ATPase family associated with various cellular activities (AAA) Chro_0255 PF01434 Peptidase family M41 Chro_0258 PF02096 60Kd inner membrane protein Chro_0261 PF00468 Ribosomal protein L34 Chro_0263 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Chro_0263 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Chro_0264 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Chro_0265 PF02233 NAD(P) transhydrogenase beta subunit Chro_0270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Chro_0270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Chro_0273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0273 PF00989 PAS fold Chro_0273 PF00512 His Kinase A (phospho-acceptor) domain Chro_0274 PF02514 CobN/Magnesium Chelatase Chro_0275 PF00535 Glycosyl transferase family 2 Chro_0276 PF00005 ABC transporter Chro_0276 PF08402 TOBE domain Chro_0277 PF03989 DNA gyrase C-terminal domain, beta-propeller Chro_0277 PF00521 DNA gyrase/topoisomerase IV, subunit A Chro_0278 PF00072 Response regulator receiver domain Chro_0279 PF00202 Aminotransferase class-III Chro_0281 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Chro_0281 PF01502 Phosphoribosyl-AMP cyclohydrolase Chro_0282 PF07722 Peptidase C26 Chro_0285 PF00152 tRNA synthetases class II (D, K and N) Chro_0285 PF01336 OB-fold nucleic acid binding domain Chro_0289 PF01938 TRAM domain Chro_0289 PF13847 Methyltransferase domain Chro_0290 PF00502 Phycobilisome protein Chro_0293 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Chro_0296 PF00535 Glycosyl transferase family 2 Chro_0297 PF04055 Radical SAM superfamily Chro_0297 PF01938 TRAM domain Chro_0297 PF00919 Uncharacterized protein family UPF0004 Chro_0299 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_0301 PF14765 Polyketide synthase dehydratase Chro_0301 PF08659 KR domain Chro_0301 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_0301 PF00550 Phosphopantetheine attachment site Chro_0301 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_0301 PF08240 Alcohol dehydrogenase GroES-like domain Chro_0301 PF00107 Zinc-binding dehydrogenase Chro_0301 PF00698 Acyl transferase domain Chro_0301 PF16197 Ketoacyl-synthetase C-terminal extension Chro_0306 PF01040 UbiA prenyltransferase family Chro_0307 PF08241 Methyltransferase domain Chro_0308 PF02386 Cation transport protein Chro_0309 PF02254 TrkA-N domain Chro_0309 PF02080 TrkA-C domain Chro_0310 PF04055 Radical SAM superfamily Chro_0311 PF01266 FAD dependent oxidoreductase Chro_0311 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Chro_0312 PF01751 Toprim domain Chro_0312 PF00204 DNA gyrase B Chro_0312 PF00986 DNA gyrase B subunit, carboxyl terminus Chro_0312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0317 PF02617 ATP-dependent Clp protease adaptor protein ClpS Chro_0319 PF00156 Phosphoribosyl transferase domain Chro_0319 PF05139 Erythromycin esterase Chro_0327 PF00480 ROK family Chro_0328 PF13393 Histidyl-tRNA synthetase Chro_0330 PF00459 Inositol monophosphatase family Chro_0331 PF00565 Staphylococcal nuclease homologue Chro_0331 PF05901 Excalibur calcium-binding domain Chro_0332 PF00111 2Fe-2S iron-sulfur cluster binding domain Chro_0333 PF01814 Hemerythrin HHE cation binding domain Chro_0336 PF02594 Uncharacterised ACR, YggU family COG1872 Chro_0344 PF00069 Protein kinase domain Chro_0344 PF03793 PASTA domain Chro_0346 PF00293 NUDIX domain Chro_0347 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Chro_0349 PF00912 Transglycosylase Chro_0349 PF00905 Penicillin binding protein transpeptidase domain Chro_0350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Chro_0350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Chro_0353 PF00892 EamA-like transporter family Chro_0357 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Chro_0358 PF01145 SPFH domain / Band 7 family Chro_0364 PF13439 Glycosyltransferase Family 4 Chro_0364 PF00534 Glycosyl transferases group 1 Chro_0365 PF00535 Glycosyl transferase family 2 Chro_0373 PF00069 Protein kinase domain Chro_0378 PF11780 Protein of unknown function (DUF3318) Chro_0379 PF04055 Radical SAM superfamily Chro_0380 PF01966 HD domain Chro_0388 PF00733 Asparagine synthase Chro_0388 PF13537 Glutamine amidotransferase domain Chro_0390 PF01177 Asp/Glu/Hydantoin racemase Chro_0391 PF01494 FAD binding domain Chro_0393 PF01914 MarC family integral membrane protein Chro_0394 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Chro_0394 PF09363 XFP C-terminal domain Chro_0394 PF09364 XFP N-terminal domain Chro_0395 PF00343 Carbohydrate phosphorylase Chro_0397 PF00300 Histidine phosphatase superfamily (branch 1) Chro_0403 PF00005 ABC transporter Chro_0404 PF01297 Zinc-uptake complex component A periplasmic Chro_0406 PF04966 Carbohydrate-selective porin, OprB family Chro_0406 PF00395 S-layer homology domain Chro_0407 PF00490 Delta-aminolevulinic acid dehydratase Chro_0412 PF00248 Aldo/keto reductase family Chro_0413 PF00581 Rhodanese-like domain Chro_0415 PF00762 Ferrochelatase Chro_0416 PF18698 Histidine kinase sensor domain Chro_0416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0416 PF00672 HAMP domain Chro_0416 PF00512 His Kinase A (phospho-acceptor) domain Chro_0420 PF01906 Putative heavy-metal-binding Chro_0423 PF05491 RuvB C-terminal winged helix domain Chro_0423 PF17864 RuvB AAA lid domain Chro_0423 PF05496 Holliday junction DNA helicase RuvB P-loop domain Chro_0427 PF00005 ABC transporter Chro_0432 PF00593 TonB dependent receptor Chro_0432 PF07715 TonB-dependent Receptor Plug Domain Chro_0434 PF00180 Isocitrate/isopropylmalate dehydrogenase Chro_0436 PF01478 Type IV leader peptidase family Chro_0436 PF06750 Bacterial Peptidase A24 N-terminal domain Chro_0438 PF17848 Acetyl-coA carboxylase zinc finger domain Chro_0438 PF01039 Carboxyl transferase domain Chro_0441 PF14495 Cytochrome c-550 domain Chro_0444 PF00582 Universal stress protein family Chro_0446 PF01649 Ribosomal protein S20 Chro_0447 PF01026 TatD related DNase Chro_0451 PF13180 PDZ domain Chro_0452 PF02583 Metal-sensitive transcriptional repressor Chro_0453 PF08241 Methyltransferase domain Chro_0454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_0454 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Chro_0456 PF03109 ABC1 family Chro_0458 PF01433 Peptidase family M1 domain Chro_0458 PF11838 ERAP1-like C-terminal domain Chro_0462 PF00145 C-5 cytosine-specific DNA methylase Chro_0465 PF00067 Cytochrome P450 Chro_0468 PF00551 Formyl transferase Chro_0468 PF01842 ACT domain Chro_0470 PF00085 Thioredoxin Chro_0472 PF00118 TCP-1/cpn60 chaperonin family Chro_0473 PF02769 AIR synthase related protein, C-terminal domain Chro_0473 PF00586 AIR synthase related protein, N-terminal domain Chro_0474 PF00892 EamA-like transporter family Chro_0475 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Chro_0475 PF02805 Metal binding domain of Ada Chro_0475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Chro_0475 PF12833 Helix-turn-helix domain Chro_0478 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Chro_0478 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Chro_0478 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Chro_0478 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Chro_0488 PF00069 Protein kinase domain Chro_0490 PF01612 3'-5' exonuclease Chro_0490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Chro_0490 PF01367 5'-3' exonuclease, C-terminal SAM fold Chro_0490 PF00476 DNA polymerase family A Chro_0491 PF00561 alpha/beta hydrolase fold Chro_0492 PF02446 4-alpha-glucanotransferase Chro_0494 PF01593 Flavin containing amine oxidoreductase Chro_0495 PF10458 Valyl tRNA synthetase tRNA binding arm Chro_0495 PF00133 tRNA synthetases class I (I, L, M and V) Chro_0495 PF08264 Anticodon-binding domain of tRNA Chro_0495 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Chro_0496 PF00092 von Willebrand factor type A domain Chro_0497 PF00085 Thioredoxin Chro_0498 PF01914 MarC family integral membrane protein Chro_0499 PF00075 RNase H Chro_0505 PF13649 Methyltransferase domain Chro_0507 PF00069 Protein kinase domain Chro_0508 PF14572 Phosphoribosyl synthetase-associated domain Chro_0508 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Chro_0512 PF00005 ABC transporter Chro_0513 PF02527 rRNA small subunit methyltransferase G Chro_0518 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Chro_0518 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Chro_0519 PF00248 Aldo/keto reductase family Chro_0523 PF00486 Transcriptional regulatory protein, C terminal Chro_0523 PF00072 Response regulator receiver domain Chro_0523 PF01627 Hpt domain Chro_0524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0524 PF00512 His Kinase A (phospho-acceptor) domain Chro_0524 PF00989 PAS fold Chro_0524 PF16736 Single Cache-like Chro_0525 PF13520 Amino acid permease Chro_0527 PF02225 PA domain Chro_0527 PF04389 Peptidase family M28 Chro_0528 PF13180 PDZ domain Chro_0529 PF00684 DnaJ central domain Chro_0529 PF01556 DnaJ C terminal domain Chro_0529 PF00226 DnaJ domain Chro_0531 PF01544 CorA-like Mg2+ transporter protein Chro_0534 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_0540 PF06150 ChaB Chro_0541 PF00301 Rubredoxin Chro_0545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Chro_0545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Chro_0548 PF00206 Lyase Chro_0548 PF10397 Adenylosuccinate lyase C-terminus Chro_0555 PF11283 Protein of unknown function (DUF3084) Chro_0558 PF01926 50S ribosome-binding GTPase Chro_0558 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Chro_0559 PF05552 Conserved TM helix Chro_0562 PF13369 Transglutaminase-like superfamily Chro_0563 PF00512 His Kinase A (phospho-acceptor) domain Chro_0563 PF00672 HAMP domain Chro_0563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0564 PF00486 Transcriptional regulatory protein, C terminal Chro_0564 PF00072 Response regulator receiver domain Chro_0566 PF00535 Glycosyl transferase family 2 Chro_0569 PF04966 Carbohydrate-selective porin, OprB family Chro_0571 PF00440 Bacterial regulatory proteins, tetR family Chro_0574 PF01894 Uncharacterised protein family UPF0047 Chro_0575 PF01594 AI-2E family transporter Chro_0577 PF02785 Biotin carboxylase C-terminal domain Chro_0577 PF00289 Biotin carboxylase, N-terminal domain Chro_0577 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Chro_0579 PF00005 ABC transporter Chro_0579 PF00664 ABC transporter transmembrane region Chro_0580 PF01565 FAD binding domain Chro_0580 PF13183 4Fe-4S dicluster domain Chro_0580 PF02913 FAD linked oxidases, C-terminal domain Chro_0581 PF02152 Dihydroneopterin aldolase Chro_0583 PF00118 TCP-1/cpn60 chaperonin family Chro_0584 PF00166 Chaperonin 10 Kd subunit Chro_0586 PF00486 Transcriptional regulatory protein, C terminal Chro_0586 PF00072 Response regulator receiver domain Chro_0587 PF00226 DnaJ domain Chro_0587 PF00684 DnaJ central domain Chro_0587 PF01556 DnaJ C terminal domain Chro_0590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Chro_0591 PF00085 Thioredoxin Chro_0592 PF01022 Bacterial regulatory protein, arsR family Chro_0593 PF00679 Elongation factor G C-terminus Chro_0593 PF03764 Elongation factor G, domain IV Chro_0593 PF14492 Elongation Factor G, domain II Chro_0593 PF00009 Elongation factor Tu GTP binding domain Chro_0595 PF03572 Peptidase family S41 Chro_0595 PF00595 PDZ domain Chro_0597 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_0599 PF13579 Glycosyl transferase 4-like domain Chro_0599 PF00534 Glycosyl transferases group 1 Chro_0601 PF00534 Glycosyl transferases group 1 Chro_0601 PF08323 Starch synthase catalytic domain Chro_0602 PF13439 Glycosyltransferase Family 4 Chro_0602 PF00534 Glycosyl transferases group 1 Chro_0611 PF00512 His Kinase A (phospho-acceptor) domain Chro_0611 PF01627 Hpt domain Chro_0611 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_0611 PF00672 HAMP domain Chro_0611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0611 PF00072 Response regulator receiver domain Chro_0613 PF00512 His Kinase A (phospho-acceptor) domain Chro_0613 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0613 PF00072 Response regulator receiver domain Chro_0613 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_0614 PF01584 CheW-like domain Chro_0614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0614 PF07194 P2 response regulator binding domain Chro_0614 PF01627 Hpt domain Chro_0614 PF02895 Signal transducing histidine kinase, homodimeric domain Chro_0615 PF01584 CheW-like domain Chro_0616 PF12729 Four helix bundle sensory module for signal transduction Chro_0616 PF00672 HAMP domain Chro_0616 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_0617 PF01339 CheB methylesterase Chro_0617 PF00072 Response regulator receiver domain Chro_0618 PF03705 CheR methyltransferase, all-alpha domain Chro_0618 PF01739 CheR methyltransferase, SAM binding domain Chro_0623 PF00579 tRNA synthetases class I (W and Y) Chro_0627 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0628 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0629 PF12849 PBP superfamily domain Chro_0631 PF02910 Fumarate reductase flavoprotein C-term Chro_0631 PF00890 FAD binding domain Chro_0632 PF01169 Uncharacterized protein family UPF0016 Chro_0634 PF01593 Flavin containing amine oxidoreductase Chro_0635 PF00582 Universal stress protein family Chro_0639 PF02021 Uncharacterised protein family UPF0102 Chro_0641 PF08240 Alcohol dehydrogenase GroES-like domain Chro_0641 PF00107 Zinc-binding dehydrogenase Chro_0642 PF08275 DNA primase catalytic core, N-terminal domain Chro_0642 PF01807 CHC2 zinc finger Chro_0643 PF01209 ubiE/COQ5 methyltransferase family Chro_0645 PF00158 Sigma-54 interaction domain Chro_0645 PF02954 Bacterial regulatory protein, Fis family Chro_0645 PF01590 GAF domain Chro_0646 PF00348 Polyprenyl synthetase Chro_0649 PF01177 Asp/Glu/Hydantoin racemase Chro_0650 PF01520 N-acetylmuramoyl-L-alanine amidase Chro_0651 PF00999 Sodium/hydrogen exchanger family Chro_0652 PF00072 Response regulator receiver domain Chro_0653 PF04055 Radical SAM superfamily Chro_0655 PF02653 Branched-chain amino acid transport system / permease component Chro_0656 PF00512 His Kinase A (phospho-acceptor) domain Chro_0656 PF13426 PAS domain Chro_0656 PF00072 Response regulator receiver domain Chro_0656 PF08448 PAS fold Chro_0656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0657 PF00989 PAS fold Chro_0657 PF00512 His Kinase A (phospho-acceptor) domain Chro_0657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0658 PF02540 NAD synthase Chro_0662 PF00106 short chain dehydrogenase Chro_0663 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_0667 PF00005 ABC transporter Chro_0671 PF01593 Flavin containing amine oxidoreductase Chro_0672 PF01593 Flavin containing amine oxidoreductase Chro_0681 PF07499 RuvA, C-terminal domain Chro_0681 PF01330 RuvA N terminal domain Chro_0682 PF12911 N-terminal TM domain of oligopeptide transport permease C Chro_0682 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0684 PF00480 ROK family Chro_0686 PF00034 Cytochrome c Chro_0686 PF03150 Di-haem cytochrome c peroxidase Chro_0688 PF02504 Fatty acid synthesis protein Chro_0689 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Chro_0689 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Chro_0690 PF00698 Acyl transferase domain Chro_0691 PF13193 AMP-binding enzyme C-terminal domain Chro_0691 PF00501 AMP-binding enzyme Chro_0691 PF01553 Acyltransferase Chro_0693 PF01594 AI-2E family transporter Chro_0698 PF00657 GDSL-like Lipase/Acylhydrolase Chro_0698 PF00404 Dockerin type I domain Chro_0700 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Chro_0701 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_0703 PF00664 ABC transporter transmembrane region Chro_0703 PF00005 ABC transporter Chro_0705 PF00732 GMC oxidoreductase Chro_0705 PF05199 GMC oxidoreductase Chro_0706 PF12464 Maltose acetyltransferase Chro_0706 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_0708 PF00535 Glycosyl transferase family 2 Chro_0709 PF00732 GMC oxidoreductase Chro_0709 PF05199 GMC oxidoreductase Chro_0710 PF00975 Thioesterase domain Chro_0710 PF13193 AMP-binding enzyme C-terminal domain Chro_0710 PF00501 AMP-binding enzyme Chro_0710 PF00668 Condensation domain Chro_0710 PF00550 Phosphopantetheine attachment site Chro_0711 PF00501 AMP-binding enzyme Chro_0711 PF13193 AMP-binding enzyme C-terminal domain Chro_0712 PF00221 Aromatic amino acid lyase Chro_0714 PF00135 Carboxylesterase family Chro_0718 PF00793 DAHP synthetase I family Chro_0719 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Chro_0719 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Chro_0719 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Chro_0720 PF02348 Cytidylyltransferase Chro_0721 PF01380 SIS domain Chro_0721 PF00571 CBS domain Chro_0725 PF00535 Glycosyl transferase family 2 Chro_0726 PF05199 GMC oxidoreductase Chro_0726 PF00732 GMC oxidoreductase Chro_0727 PF16363 GDP-mannose 4,6 dehydratase Chro_0733 PF00483 Nucleotidyl transferase Chro_0737 PF13439 Glycosyltransferase Family 4 Chro_0737 PF00534 Glycosyl transferases group 1 Chro_0738 PF00535 Glycosyl transferase family 2 Chro_0739 PF00534 Glycosyl transferases group 1 Chro_0739 PF13439 Glycosyltransferase Family 4 Chro_0749 PF00350 Dynamin family Chro_0753 PF07685 CobB/CobQ-like glutamine amidotransferase domain Chro_0753 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Chro_0754 PF10128 Glucose-6-phosphate dehydrogenase subunit Chro_0754 PF01471 Putative peptidoglycan binding domain Chro_0755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Chro_0755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Chro_0756 PF00923 Transaldolase/Fructose-6-phosphate aldolase Chro_0758 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Chro_0760 PF17975 Ribonucleotide reductase alpha domain Chro_0761 PF01494 FAD binding domain Chro_0762 PF17932 Tetracyclin repressor-like, C-terminal domain Chro_0762 PF00440 Bacterial regulatory proteins, tetR family Chro_0764 PF08264 Anticodon-binding domain of tRNA Chro_0764 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Chro_0764 PF00133 tRNA synthetases class I (I, L, M and V) Chro_0764 PF10458 Valyl tRNA synthetase tRNA binding arm Chro_0767 PF03109 ABC1 family Chro_0770 PF00999 Sodium/hydrogen exchanger family Chro_0771 PF02463 RecF/RecN/SMC N terminal domain Chro_0774 PF00196 Bacterial regulatory proteins, luxR family Chro_0774 PF00072 Response regulator receiver domain Chro_0776 PF01380 SIS domain Chro_0777 PF12838 4Fe-4S dicluster domain Chro_0778 PF01761 3-dehydroquinate synthase Chro_0782 PF03061 Thioesterase superfamily Chro_0783 PF02016 LD-carboxypeptidase N-terminal domain Chro_0783 PF17676 LD-carboxypeptidase C-terminal domain Chro_0784 PF13419 Haloacid dehalogenase-like hydrolase Chro_0786 PF00578 AhpC/TSA family Chro_0792 PF13439 Glycosyltransferase Family 4 Chro_0792 PF00534 Glycosyl transferases group 1 Chro_0794 PF00534 Glycosyl transferases group 1 Chro_0795 PF13439 Glycosyltransferase Family 4 Chro_0795 PF00534 Glycosyl transferases group 1 Chro_0796 PF00535 Glycosyl transferase family 2 Chro_0797 PF13439 Glycosyltransferase Family 4 Chro_0797 PF00534 Glycosyl transferases group 1 Chro_0800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_0801 PF16363 GDP-mannose 4,6 dehydratase Chro_0802 PF12464 Maltose acetyltransferase Chro_0802 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_0803 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_0804 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Chro_0804 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_0807 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_0808 PF00005 ABC transporter Chro_0810 PF13614 AAA domain Chro_0811 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_0812 PF08264 Anticodon-binding domain of tRNA Chro_0812 PF06827 Zinc finger found in FPG and IleRS Chro_0812 PF00133 tRNA synthetases class I (I, L, M and V) Chro_0819 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Chro_0819 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Chro_0819 PF01842 ACT domain Chro_0821 PF13439 Glycosyltransferase Family 4 Chro_0821 PF00534 Glycosyl transferases group 1 Chro_0824 PF00106 short chain dehydrogenase Chro_0825 PF01235 Sodium:alanine symporter family Chro_0826 PF00582 Universal stress protein family Chro_0827 PF00732 GMC oxidoreductase Chro_0827 PF05199 GMC oxidoreductase Chro_0828 PF00510 Cytochrome c oxidase subunit III Chro_0829 PF00115 Cytochrome C and Quinol oxidase polypeptide I Chro_0830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Chro_0830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Chro_0850 PF02308 MgtC family Chro_0852 PF00043 Glutathione S-transferase, C-terminal domain Chro_0852 PF02798 Glutathione S-transferase, N-terminal domain Chro_0853 PF00067 Cytochrome P450 Chro_0854 PF00440 Bacterial regulatory proteins, tetR family Chro_0854 PF08359 YsiA-like protein, C-terminal region Chro_0855 PF00881 Nitroreductase family Chro_0856 PF13732 Domain of unknown function (DUF4162) Chro_0856 PF00005 ABC transporter Chro_0872 PF01435 Peptidase family M48 Chro_0872 PF13181 Tetratricopeptide repeat Chro_0873 PF00128 Alpha amylase, catalytic domain Chro_0873 PF16657 Maltogenic Amylase, C-terminal domain Chro_0874 PF00072 Response regulator receiver domain Chro_0874 PF00486 Transcriptional regulatory protein, C terminal Chro_0875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_0875 PF00512 His Kinase A (phospho-acceptor) domain Chro_0875 PF00672 HAMP domain Chro_0876 PF00535 Glycosyl transferase family 2 Chro_0877 PF00005 ABC transporter Chro_0877 PF00664 ABC transporter transmembrane region Chro_0879 PF13439 Glycosyltransferase Family 4 Chro_0879 PF00534 Glycosyl transferases group 1 Chro_0884 PF02687 FtsX-like permease family Chro_0884 PF00005 ABC transporter Chro_0884 PF12704 MacB-like periplasmic core domain Chro_0885 PF00296 Luciferase-like monooxygenase Chro_0890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Chro_0890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Chro_0893 PF00156 Phosphoribosyl transferase domain Chro_0896 PF00571 CBS domain Chro_0896 PF01595 Cyclin M transmembrane N-terminal domain Chro_0896 PF03471 Transporter associated domain Chro_0897 PF06508 Queuosine biosynthesis protein QueC Chro_0898 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Chro_0898 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_0901 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Chro_0901 PF00391 PEP-utilising enzyme, mobile domain Chro_0903 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0904 PF00005 ABC transporter Chro_0905 PF00005 ABC transporter Chro_0906 PF01740 STAS domain Chro_0906 PF00916 Sulfate permease family Chro_0910 PF00361 Proton-conducting membrane transporter Chro_0917 PF02142 MGS-like domain Chro_0917 PF00781 Diacylglycerol kinase catalytic domain Chro_0919 PF16657 Maltogenic Amylase, C-terminal domain Chro_0919 PF00128 Alpha amylase, catalytic domain Chro_0919 PF02903 Alpha amylase, N-terminal ig-like domain Chro_0920 PF00483 Nucleotidyl transferase Chro_0923 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0924 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0925 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_0926 PF00005 ABC transporter Chro_0927 PF00576 HIUase/Transthyretin family Chro_0928 PF01014 Uricase Chro_0928 PF09349 OHCU decarboxylase Chro_0929 PF00395 S-layer homology domain Chro_0929 PF04966 Carbohydrate-selective porin, OprB family Chro_0932 PF00860 Permease family Chro_0933 PF01494 FAD binding domain Chro_0935 PF00106 short chain dehydrogenase Chro_0936 PF01546 Peptidase family M20/M25/M40 Chro_0936 PF07687 Peptidase dimerisation domain Chro_0942 PF00664 ABC transporter transmembrane region Chro_0942 PF03412 Peptidase C39 family Chro_0942 PF00005 ABC transporter Chro_0945 PF01596 O-methyltransferase Chro_0948 PF02798 Glutathione S-transferase, N-terminal domain Chro_0948 PF00043 Glutathione S-transferase, C-terminal domain Chro_0951 PF05193 Peptidase M16 inactive domain Chro_0951 PF00675 Insulinase (Peptidase family M16) Chro_0954 PF05195 Aminopeptidase P, N-terminal domain Chro_0954 PF00557 Metallopeptidase family M24 Chro_0956 PF00571 CBS domain Chro_0956 PF01769 Divalent cation transporter Chro_0956 PF03448 MgtE intracellular N domain Chro_0957 PF00528 Binding-protein-dependent transport system inner membrane component Chro_0961 PF00005 ABC transporter Chro_0961 PF08402 TOBE domain Chro_0963 PF07729 FCD domain Chro_0963 PF00392 Bacterial regulatory proteins, gntR family Chro_0965 PF01177 Asp/Glu/Hydantoin racemase Chro_0967 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Chro_0971 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Chro_0971 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Chro_0972 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Chro_0972 PF00749 tRNA synthetases class I (E and Q), catalytic domain Chro_0974 PF01842 ACT domain Chro_0974 PF03447 Homoserine dehydrogenase, NAD binding domain Chro_0974 PF00742 Homoserine dehydrogenase Chro_0975 PF01383 CpcD/allophycocyanin linker domain Chro_0975 PF00175 Oxidoreductase NAD-binding domain Chro_0976 PF00485 Phosphoribulokinase / Uridine kinase family Chro_0978 PF02577 Bifunctional nuclease Chro_0979 PF00677 Lumazine binding domain Chro_0980 PF01464 Transglycosylase SLT domain Chro_0980 PF10145 Phage-related minor tail protein Chro_0980 PF01551 Peptidase family M23 Chro_0981 PF08279 HTH domain Chro_0981 PF02237 Biotin protein ligase C terminal domain Chro_0981 PF03099 Biotin/lipoate A/B protein ligase family Chro_0984 PF01078 Magnesium chelatase, subunit ChlI Chro_0984 PF17863 AAA lid domain Chro_0987 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain Chro_0990 PF00478 IMP dehydrogenase / GMP reductase domain Chro_0990 PF00571 CBS domain Chro_0992 PF03707 Bacterial signalling protein N terminal repeat Chro_0992 PF00563 EAL domain Chro_0992 PF00990 Diguanylate cyclase, GGDEF domain Chro_0996 PF01494 FAD binding domain Chro_0997 PF02560 Cyanate lyase C-terminal domain Chro_1000 PF09210 Domain of unknown function (DUF1957) Chro_1000 PF03065 Glycosyl hydrolase family 57 Chro_1003 PF08719 Domain of unknown function (DUF1768) Chro_1004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Chro_1004 PF03466 LysR substrate binding domain Chro_1007 PF00101 Ribulose bisphosphate carboxylase, small chain Chro_1008 PF03319 Ethanolamine utilisation protein EutN/carboxysome Chro_1009 PF00936 BMC domain Chro_1010 PF00936 BMC domain Chro_1011 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Chro_1011 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Chro_1011 PF00361 Proton-conducting membrane transporter Chro_1012 PF00361 Proton-conducting membrane transporter Chro_1016 PF00796 Photosystem I reaction centre subunit VIII Chro_1017 PF02605 Photosystem I reaction centre subunit XI Chro_1018 PF00223 Photosystem I psaA/psaB protein Chro_1019 PF00223 Photosystem I psaA/psaB protein Chro_1022 PF00072 Response regulator receiver domain Chro_1022 PF00196 Bacterial regulatory proteins, luxR family Chro_1023 PF00072 Response regulator receiver domain Chro_1024 PF03150 Di-haem cytochrome c peroxidase Chro_1024 PF00034 Cytochrome c Chro_1024 PF14376 Haem-binding domain Chro_1025 PF00512 His Kinase A (phospho-acceptor) domain Chro_1025 PF09308 LuxQ, periplasmic Chro_1025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1025 PF00072 Response regulator receiver domain Chro_1027 PF00072 Response regulator receiver domain Chro_1028 PF00563 EAL domain Chro_1028 PF00990 Diguanylate cyclase, GGDEF domain Chro_1028 PF00360 Phytochrome region Chro_1028 PF01590 GAF domain Chro_1029 PF00072 Response regulator receiver domain Chro_1029 PF01627 Hpt domain Chro_1029 PF00486 Transcriptional regulatory protein, C terminal Chro_1030 PF00124 Photosynthetic reaction centre protein Chro_1031 PF00124 Photosynthetic reaction centre protein Chro_1032 PF00502 Phycobilisome protein Chro_1033 PF00502 Phycobilisome protein Chro_1034 PF00502 Phycobilisome protein Chro_1035 PF00427 Phycobilisome Linker polypeptide Chro_1035 PF00502 Phycobilisome protein Chro_1036 PF00502 Phycobilisome protein Chro_1037 PF00124 Photosynthetic reaction centre protein Chro_1038 PF00421 Photosystem II protein Chro_1039 PF00421 Photosystem II protein Chro_1041 PF00737 Photosystem II 10 kDa phosphoprotein Chro_1044 PF10502 Signal peptidase, peptidase S26 Chro_1046 PF00069 Protein kinase domain Chro_1048 PF13396 Phospholipase_D-nuclease N-terminal Chro_1048 PF13091 PLD-like domain Chro_1051 PF03055 Retinal pigment epithelial membrane protein Chro_1061 PF06206 CpeT/CpcT family (DUF1001) Chro_1064 PF08245 Mur ligase middle domain Chro_1064 PF08443 RimK-like ATP-grasp domain Chro_1064 PF02875 Mur ligase family, glutamate ligase domain Chro_1070 PF02585 GlcNAc-PI de-N-acetylase Chro_1077 PF00067 Cytochrome P450 Chro_1081 PF01112 Asparaginase Chro_1082 PF12804 MobA-like NTP transferase domain Chro_1082 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_1086 PF00005 ABC transporter Chro_1086 PF02687 FtsX-like permease family Chro_1086 PF12704 MacB-like periplasmic core domain Chro_1091 PF17932 Tetracyclin repressor-like, C-terminal domain Chro_1091 PF00440 Bacterial regulatory proteins, tetR family Chro_1093 PF00582 Universal stress protein family Chro_1094 PF01926 50S ribosome-binding GTPase Chro_1095 PF05969 Photosystem II complex subunit Ycf12 Chro_1099 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Chro_1099 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Chro_1106 PF16363 GDP-mannose 4,6 dehydratase Chro_1108 PF00535 Glycosyl transferase family 2 Chro_1109 PF01370 NAD dependent epimerase/dehydratase family Chro_1110 PF01385 Probable transposase Chro_1110 PF12323 Helix-turn-helix domain Chro_1110 PF07282 Putative transposase DNA-binding domain Chro_1113 PF01047 MarR family Chro_1114 PF00400 WD domain, G-beta repeat Chro_1114 PF12894 Anaphase-promoting complex subunit 4 WD40 domain Chro_1116 PF02806 Alpha amylase, C-terminal all-beta domain Chro_1116 PF00128 Alpha amylase, catalytic domain Chro_1116 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Chro_1117 PF00248 Aldo/keto reductase family Chro_1118 PF12697 Alpha/beta hydrolase family Chro_1119 PF00561 alpha/beta hydrolase fold Chro_1120 PF05199 GMC oxidoreductase Chro_1120 PF00732 GMC oxidoreductase Chro_1121 PF05199 GMC oxidoreductase Chro_1121 PF00732 GMC oxidoreductase Chro_1125 PF00205 Thiamine pyrophosphate enzyme, central domain Chro_1125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_1125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chro_1129 PF12833 Helix-turn-helix domain Chro_1129 PF02311 AraC-like ligand binding domain Chro_1130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Chro_1130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_1131 PF01916 Deoxyhypusine synthase Chro_1132 PF01661 Macro domain Chro_1133 PF00171 Aldehyde dehydrogenase family Chro_1141 PF00124 Photosynthetic reaction centre protein Chro_1143 PF02806 Alpha amylase, C-terminal all-beta domain Chro_1143 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Chro_1143 PF00128 Alpha amylase, catalytic domain Chro_1155 PF01568 Molydopterin dinucleotide binding domain Chro_1155 PF00384 Molybdopterin oxidoreductase Chro_1155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Chro_1155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Chro_1155 PF12838 4Fe-4S dicluster domain Chro_1156 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Chro_1156 PF00037 4Fe-4S binding domain Chro_1156 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Chro_1159 PF00391 PEP-utilising enzyme, mobile domain Chro_1159 PF02896 PEP-utilising enzyme, TIM barrel domain Chro_1159 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Chro_1161 PF00684 DnaJ central domain Chro_1161 PF01556 DnaJ C terminal domain Chro_1161 PF00226 DnaJ domain Chro_1193 PF13614 AAA domain Chro_1194 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_1195 PF01209 ubiE/COQ5 methyltransferase family Chro_1199 PF02397 Bacterial sugar transferase Chro_1200 PF01370 NAD dependent epimerase/dehydratase family Chro_1201 PF00953 Glycosyl transferase family 4 Chro_1203 PF01370 NAD dependent epimerase/dehydratase family Chro_1204 PF00535 Glycosyl transferase family 2 Chro_1206 PF00534 Glycosyl transferases group 1 Chro_1206 PF13439 Glycosyltransferase Family 4 Chro_1212 PF00421 Photosystem II protein Chro_1214 PF02392 Ycf4 Chro_1215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Chro_1216 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_1216 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_1217 PF07995 Glucose / Sorbosone dehydrogenase Chro_1218 PF01425 Amidase Chro_1219 PF01434 Peptidase family M41 Chro_1219 PF17862 AAA+ lid domain Chro_1219 PF06480 FtsH Extracellular Chro_1219 PF00004 ATPase family associated with various cellular activities (AAA) Chro_1222 PF08669 Glycine cleavage T-protein C-terminal barrel domain Chro_1222 PF01571 Aminomethyltransferase folate-binding domain Chro_1224 PF03773 Predicted permease Chro_1225 PF17991 Thioredoxin like C-terminal domain Chro_1225 PF00578 AhpC/TSA family Chro_1225 PF02683 Cytochrome C biogenesis protein transmembrane region Chro_1227 PF02080 TrkA-C domain Chro_1227 PF03600 Citrate transporter Chro_1229 PF00395 S-layer homology domain Chro_1229 PF04966 Carbohydrate-selective porin, OprB family Chro_1234 PF02570 Precorrin-8X methylmutase Chro_1236 PF16338 Domain of unknown function (DUF4968) Chro_1236 PF17137 Domain of unknown function (DUF5110) Chro_1236 PF13802 Galactose mutarotase-like Chro_1236 PF01055 Glycosyl hydrolases family 31 Chro_1237 PF13545 Crp-like helix-turn-helix domain Chro_1240 PF13847 Methyltransferase domain Chro_1244 PF03631 Virulence factor BrkB Chro_1247 PF03471 Transporter associated domain Chro_1247 PF00999 Sodium/hydrogen exchanger family Chro_1248 PF00067 Cytochrome P450 Chro_1249 PF00535 Glycosyl transferase family 2 Chro_1250 PF00936 BMC domain Chro_1251 PF00936 BMC domain Chro_1253 PF08676 MutL C terminal dimerisation domain Chro_1253 PF01119 DNA mismatch repair protein, C-terminal domain Chro_1258 PF01593 Flavin containing amine oxidoreductase Chro_1261 PF03466 LysR substrate binding domain Chro_1261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Chro_1265 PF01596 O-methyltransferase Chro_1267 PF05958 tRNA (Uracil-5-)-methyltransferase Chro_1267 PF01938 TRAM domain Chro_1269 PF08450 SMP-30/Gluconolactonase/LRE-like region Chro_1271 PF00072 Response regulator receiver domain Chro_1272 PF00672 HAMP domain Chro_1272 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_1272 PF00512 His Kinase A (phospho-acceptor) domain Chro_1272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1272 PF01627 Hpt domain Chro_1272 PF00072 Response regulator receiver domain Chro_1275 PF03275 UDP-galactopyranose mutase Chro_1276 PF00535 Glycosyl transferase family 2 Chro_1279 PF00005 ABC transporter Chro_1282 PF14251 Domain of unknown function (DUF4346) Chro_1286 PF00873 AcrB/AcrD/AcrF family Chro_1289 PF01556 DnaJ C terminal domain Chro_1289 PF00226 DnaJ domain Chro_1292 PF04336 Acyl carrier protein phosphodiesterase Chro_1294 PF10726 Protein of function (DUF2518) Chro_1295 PF00465 Iron-containing alcohol dehydrogenase Chro_1296 PF00155 Aminotransferase class I and II Chro_1305 PF00264 Common central domain of tyrosinase Chro_1306 PF00248 Aldo/keto reductase family Chro_1308 PF02915 Rubrerythrin Chro_1311 PF02597 ThiS family Chro_1312 PF00291 Pyridoxal-phosphate dependent enzyme Chro_1316 PF00563 EAL domain Chro_1316 PF00360 Phytochrome region Chro_1316 PF01590 GAF domain Chro_1316 PF00990 Diguanylate cyclase, GGDEF domain Chro_1317 PF00672 HAMP domain Chro_1317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1317 PF01627 Hpt domain Chro_1317 PF00512 His Kinase A (phospho-acceptor) domain Chro_1317 PF00072 Response regulator receiver domain Chro_1317 PF17149 Periplasmic sensor domain found in signal transduction proteins Chro_1319 PF00950 ABC 3 transport family Chro_1320 PF00005 ABC transporter Chro_1321 PF01297 Zinc-uptake complex component A periplasmic Chro_1326 PF07715 TonB-dependent Receptor Plug Domain Chro_1326 PF00593 TonB dependent receptor Chro_1328 PF14525 AraC-binding-like domain Chro_1328 PF12833 Helix-turn-helix domain Chro_1329 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Chro_1330 PF00012 Hsp70 protein Chro_1332 PF05175 Methyltransferase small domain Chro_1335 PF00676 Dehydrogenase E1 component Chro_1336 PF01556 DnaJ C terminal domain Chro_1336 PF00684 DnaJ central domain Chro_1336 PF00226 DnaJ domain Chro_1339 PF01329 Pterin 4 alpha carbinolamine dehydratase Chro_1341 PF00156 Phosphoribosyl transferase domain Chro_1342 PF01554 MatE Chro_1344 PF02311 AraC-like ligand binding domain Chro_1344 PF12833 Helix-turn-helix domain Chro_1352 PF13847 Methyltransferase domain Chro_1352 PF03551 Transcriptional regulator PadR-like family Chro_1353 PF00912 Transglycosylase Chro_1353 PF06832 Penicillin-Binding Protein C-terminus Family Chro_1353 PF00905 Penicillin binding protein transpeptidase domain Chro_1354 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1356 PF08402 TOBE domain Chro_1356 PF00005 ABC transporter Chro_1357 PF03717 Penicillin-binding Protein dimerisation domain Chro_1357 PF00905 Penicillin binding protein transpeptidase domain Chro_1359 PF06167 Glucose-regulated metallo-peptidase M90 Chro_1360 PF09308 LuxQ, periplasmic Chro_1360 PF00072 Response regulator receiver domain Chro_1360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1360 PF00512 His Kinase A (phospho-acceptor) domain Chro_1361 PF03707 Bacterial signalling protein N terminal repeat Chro_1361 PF00990 Diguanylate cyclase, GGDEF domain Chro_1361 PF00563 EAL domain Chro_1364 PF00291 Pyridoxal-phosphate dependent enzyme Chro_1364 PF00585 C-terminal regulatory domain of Threonine dehydratase Chro_1365 PF01835 MG2 domain Chro_1365 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Chro_1365 PF07703 Alpha-2-macroglobulin bait region domain Chro_1365 PF00207 Alpha-2-macroglobulin family Chro_1366 PF13458 Periplasmic binding protein Chro_1371 PF13368 Topoisomerase C-terminal repeat Chro_1371 PF01751 Toprim domain Chro_1371 PF01131 DNA topoisomerase Chro_1372 PF13426 PAS domain Chro_1372 PF00512 His Kinase A (phospho-acceptor) domain Chro_1372 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1372 PF00672 HAMP domain Chro_1375 PF00535 Glycosyl transferase family 2 Chro_1376 PF07720 Tetratricopeptide repeat Chro_1376 PF01435 Peptidase family M48 Chro_1383 PF10417 C-terminal domain of 1-Cys peroxiredoxin Chro_1383 PF00578 AhpC/TSA family Chro_1384 PF12894 Anaphase-promoting complex subunit 4 WD40 domain Chro_1384 PF00400 WD domain, G-beta repeat Chro_1385 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Chro_1386 PF10674 Protein of unknown function (DUF2488) Chro_1387 PF02681 Divergent PAP2 family Chro_1388 PF00348 Polyprenyl synthetase Chro_1389 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Chro_1389 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Chro_1391 PF00293 NUDIX domain Chro_1392 PF00892 EamA-like transporter family Chro_1393 PF02463 RecF/RecN/SMC N terminal domain Chro_1396 PF00149 Calcineurin-like phosphoesterase Chro_1401 PF02618 YceG-like family Chro_1402 PF01716 Manganese-stabilising protein / photosystem II polypeptide Chro_1403 PF04539 Sigma-70 region 3 Chro_1403 PF04542 Sigma-70 region 2 Chro_1403 PF04545 Sigma-70, region 4 Chro_1409 PF01472 PUA domain Chro_1409 PF00696 Amino acid kinase family Chro_1411 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Chro_1412 PF01241 Photosystem I psaG / psaK Chro_1413 PF01241 Photosystem I psaG / psaK Chro_1415 PF02163 Peptidase family M50 Chro_1415 PF00571 CBS domain Chro_1416 PF03575 Peptidase family S51 Chro_1417 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Chro_1418 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Chro_1420 PF02469 Fasciclin domain Chro_1427 PF00588 SpoU rRNA Methylase family Chro_1433 PF00486 Transcriptional regulatory protein, C terminal Chro_1433 PF00072 Response regulator receiver domain Chro_1434 PF00512 His Kinase A (phospho-acceptor) domain Chro_1434 PF00989 PAS fold Chro_1434 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1435 PF01895 PhoU domain Chro_1437 PF13545 Crp-like helix-turn-helix domain Chro_1438 PF00395 S-layer homology domain Chro_1438 PF04966 Carbohydrate-selective porin, OprB family Chro_1441 PF08264 Anticodon-binding domain of tRNA Chro_1441 PF09334 tRNA synthetases class I (M) Chro_1441 PF00133 tRNA synthetases class I (I, L, M and V) Chro_1443 PF12146 Serine aminopeptidase, S33 Chro_1444 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Chro_1444 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Chro_1450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_1451 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_1454 PF13188 PAS domain Chro_1454 PF08448 PAS fold Chro_1454 PF00512 His Kinase A (phospho-acceptor) domain Chro_1454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1454 PF00072 Response regulator receiver domain Chro_1455 PF00561 alpha/beta hydrolase fold Chro_1457 PF00072 Response regulator receiver domain Chro_1457 PF13188 PAS domain Chro_1457 PF08448 PAS fold Chro_1457 PF00512 His Kinase A (phospho-acceptor) domain Chro_1457 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1458 PF06480 FtsH Extracellular Chro_1458 PF17862 AAA+ lid domain Chro_1458 PF00004 ATPase family associated with various cellular activities (AAA) Chro_1458 PF01434 Peptidase family M41 Chro_1459 PF00106 short chain dehydrogenase Chro_1460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_1463 PF00486 Transcriptional regulatory protein, C terminal Chro_1463 PF00072 Response regulator receiver domain Chro_1465 PF02779 Transketolase, pyrimidine binding domain Chro_1465 PF02780 Transketolase, C-terminal domain Chro_1465 PF00364 Biotin-requiring enzyme Chro_1466 PF02355 Protein export membrane protein Chro_1466 PF07549 SecD/SecF GG Motif Chro_1467 PF07549 SecD/SecF GG Motif Chro_1467 PF02355 Protein export membrane protein Chro_1469 PF00072 Response regulator receiver domain Chro_1469 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1469 PF09308 LuxQ, periplasmic Chro_1469 PF00512 His Kinase A (phospho-acceptor) domain Chro_1470 PF01300 Telomere recombination Chro_1474 PF02405 Permease MlaE Chro_1477 PF00675 Insulinase (Peptidase family M16) Chro_1477 PF05193 Peptidase M16 inactive domain Chro_1478 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Chro_1478 PF02222 ATP-grasp domain Chro_1480 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Chro_1482 PF00106 short chain dehydrogenase Chro_1483 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_1483 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Chro_1485 PF00271 Helicase conserved C-terminal domain Chro_1485 PF04851 Type III restriction enzyme, res subunit Chro_1485 PF02151 UvrB/uvrC motif Chro_1485 PF12344 Ultra-violet resistance protein B Chro_1485 PF17757 UvrB interaction domain Chro_1487 PF05532 CsbD-like Chro_1494 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Chro_1496 PF00253 Ribosomal protein S14p/S29e Chro_1497 PF00633 Helix-hairpin-helix motif Chro_1497 PF00730 HhH-GPD superfamily base excision DNA repair protein Chro_1498 PF02163 Peptidase family M50 Chro_1498 PF13180 PDZ domain Chro_1504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1504 PF07689 KaiB domain Chro_1504 PF00512 His Kinase A (phospho-acceptor) domain Chro_1505 PF01266 FAD dependent oxidoreductase Chro_1508 PF13673 Acetyltransferase (GNAT) domain Chro_1509 PF00155 Aminotransferase class I and II Chro_1510 PF11897 Protein of unknown function (DUF3417) Chro_1510 PF00343 Carbohydrate phosphorylase Chro_1511 PF00128 Alpha amylase, catalytic domain Chro_1512 PF00128 Alpha amylase, catalytic domain Chro_1512 PF11941 Domain of unknown function (DUF3459) Chro_1513 PF00128 Alpha amylase, catalytic domain Chro_1513 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Chro_1514 PF02446 4-alpha-glucanotransferase Chro_1515 PF00128 Alpha amylase, catalytic domain Chro_1515 PF16657 Maltogenic Amylase, C-terminal domain Chro_1517 PF03649 Uncharacterised protein family (UPF0014) Chro_1518 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_1524 PF00114 Pilin (bacterial filament) Chro_1524 PF07963 Prokaryotic N-terminal methylation motif Chro_1528 PF10502 Signal peptidase, peptidase S26 Chro_1529 PF00395 S-layer homology domain Chro_1529 PF04966 Carbohydrate-selective porin, OprB family Chro_1530 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Chro_1533 PF03301 Tryptophan 2,3-dioxygenase Chro_1535 PF00246 Zinc carboxypeptidase Chro_1539 PF06071 Protein of unknown function (DUF933) Chro_1539 PF01926 50S ribosome-binding GTPase Chro_1543 PF01668 SmpB protein Chro_1544 PF00486 Transcriptional regulatory protein, C terminal Chro_1544 PF00072 Response regulator receiver domain Chro_1545 PF01451 Low molecular weight phosphotyrosine protein phosphatase Chro_1546 PF02575 YbaB/EbfC DNA-binding family Chro_1549 PF08245 Mur ligase middle domain Chro_1549 PF02875 Mur ligase family, glutamate ligase domain Chro_1549 PF01225 Mur ligase family, catalytic domain Chro_1550 PF01227 GTP cyclohydrolase I Chro_1551 PF00106 short chain dehydrogenase Chro_1552 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Chro_1553 PF01488 Shikimate / quinate 5-dehydrogenase Chro_1554 PF11266 Long-chain fatty aldehyde decarbonylase Chro_1556 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1559 PF03448 MgtE intracellular N domain Chro_1559 PF01769 Divalent cation transporter Chro_1559 PF00571 CBS domain Chro_1561 PF07687 Peptidase dimerisation domain Chro_1561 PF01546 Peptidase family M20/M25/M40 Chro_1563 PF02033 Ribosome-binding factor A Chro_1565 PF02086 D12 class N6 adenine-specific DNA methyltransferase Chro_1572 PF08241 Methyltransferase domain Chro_1577 PF00989 PAS fold Chro_1577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1577 PF00512 His Kinase A (phospho-acceptor) domain Chro_1580 PF13519 von Willebrand factor type A domain Chro_1580 PF17863 AAA lid domain Chro_1580 PF01078 Magnesium chelatase, subunit ChlI Chro_1582 PF12849 PBP superfamily domain Chro_1584 PF12849 PBP superfamily domain Chro_1585 PF00174 Oxidoreductase molybdopterin binding domain Chro_1586 PF01022 Bacterial regulatory protein, arsR family Chro_1588 PF00574 Clp protease Chro_1590 PF00005 ABC transporter Chro_1592 PF13188 PAS domain Chro_1592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1592 PF08448 PAS fold Chro_1592 PF00512 His Kinase A (phospho-acceptor) domain Chro_1592 PF00072 Response regulator receiver domain Chro_1593 PF00072 Response regulator receiver domain Chro_1594 PF00990 Diguanylate cyclase, GGDEF domain Chro_1594 PF00360 Phytochrome region Chro_1594 PF00563 EAL domain Chro_1594 PF01590 GAF domain Chro_1595 PF03070 TENA/THI-4/PQQC family Chro_1597 PF03069 Acetamidase/Formamidase family Chro_1599 PF08240 Alcohol dehydrogenase GroES-like domain Chro_1599 PF00107 Zinc-binding dehydrogenase Chro_1602 PF00990 Diguanylate cyclase, GGDEF domain Chro_1602 PF00072 Response regulator receiver domain Chro_1603 PF01070 FMN-dependent dehydrogenase Chro_1604 PF01343 Peptidase family S49 Chro_1605 PF00999 Sodium/hydrogen exchanger family Chro_1609 PF00107 Zinc-binding dehydrogenase Chro_1609 PF08240 Alcohol dehydrogenase GroES-like domain Chro_1611 PF00106 short chain dehydrogenase Chro_1612 PF10415 Fumarase C C-terminus Chro_1612 PF00206 Lyase Chro_1615 PF01256 Carbohydrate kinase Chro_1615 PF03853 YjeF-related protein N-terminus Chro_1616 PF03707 Bacterial signalling protein N terminal repeat Chro_1616 PF00990 Diguanylate cyclase, GGDEF domain Chro_1616 PF00563 EAL domain Chro_1618 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_1619 PF01593 Flavin containing amine oxidoreductase Chro_1622 PF00561 alpha/beta hydrolase fold Chro_1623 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_1624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1624 PF00512 His Kinase A (phospho-acceptor) domain Chro_1624 PF09308 LuxQ, periplasmic Chro_1624 PF00072 Response regulator receiver domain Chro_1625 PF00563 EAL domain Chro_1625 PF03707 Bacterial signalling protein N terminal repeat Chro_1625 PF00990 Diguanylate cyclase, GGDEF domain Chro_1627 PF00391 PEP-utilising enzyme, mobile domain Chro_1627 PF02896 PEP-utilising enzyme, TIM barrel domain Chro_1627 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Chro_1629 PF17191 RecG wedge domain Chro_1629 PF00270 DEAD/DEAH box helicase Chro_1629 PF00271 Helicase conserved C-terminal domain Chro_1631 PF00889 Elongation factor TS Chro_1633 PF00535 Glycosyl transferase family 2 Chro_1634 PF09335 SNARE associated Golgi protein Chro_1636 PF01250 Ribosomal protein S6 Chro_1640 PF02514 CobN/Magnesium Chelatase Chro_1640 PF11965 Domain of unknown function (DUF3479) Chro_1645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Chro_1648 PF03459 TOBE domain Chro_1648 PF00005 ABC transporter Chro_1649 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Chro_1655 PF02656 Domain of unknown function (DUF202) Chro_1662 PF02673 Bacitracin resistance protein BacA Chro_1664 PF02541 Ppx/GppA phosphatase family Chro_1665 PF01040 UbiA prenyltransferase family Chro_1666 PF05685 Putative restriction endonuclease Chro_1670 PF12452 Protein of unknown function (DUF3685) Chro_1670 PF00072 Response regulator receiver domain Chro_1671 PF01475 Ferric uptake regulator family Chro_1676 PF09367 CpeS-like protein Chro_1679 PF00124 Photosynthetic reaction centre protein Chro_1680 PF01594 AI-2E family transporter Chro_1681 PF01594 AI-2E family transporter Chro_1683 PF00005 ABC transporter Chro_1684 PF05991 YacP-like NYN domain Chro_1689 PF00270 DEAD/DEAH box helicase Chro_1689 PF00271 Helicase conserved C-terminal domain Chro_1689 PF08148 DSHCT (NUC185) domain Chro_1690 PF14748 Pyrroline-5-carboxylate reductase dimerisation Chro_1690 PF03807 NADP oxidoreductase coenzyme F420-dependent Chro_1691 PF04472 Cell division protein SepF Chro_1692 PF01168 Alanine racemase, N-terminal domain Chro_1694 PF01648 4'-phosphopantetheinyl transferase superfamily Chro_1695 PF00425 chorismate binding enzyme Chro_1695 PF04715 Anthranilate synthase component I, N terminal region Chro_1696 PF02361 Cobalt transport protein Chro_1697 PF01926 50S ribosome-binding GTPase Chro_1697 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Chro_1703 PF01556 DnaJ C terminal domain Chro_1703 PF00226 DnaJ domain Chro_1704 PF00152 tRNA synthetases class II (D, K and N) Chro_1704 PF02938 GAD domain Chro_1704 PF01336 OB-fold nucleic acid binding domain Chro_1706 PF00491 Arginase family Chro_1707 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Chro_1708 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_1710 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1711 PF00005 ABC transporter Chro_1713 PF01618 MotA/TolQ/ExbB proton channel family Chro_1714 PF02472 Biopolymer transport protein ExbD/TolR Chro_1716 PF07715 TonB-dependent Receptor Plug Domain Chro_1716 PF00593 TonB dependent receptor Chro_1717 PF01255 Putative undecaprenyl diphosphate synthase Chro_1720 PF00482 Type II secretion system (T2SS), protein F Chro_1721 PF00437 Type II/IV secretion system protein Chro_1722 PF00437 Type II/IV secretion system protein Chro_1722 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Chro_1723 PF01025 GrpE Chro_1724 PF00012 Hsp70 protein Chro_1728 PF00462 Glutaredoxin Chro_1729 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Chro_1729 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Chro_1730 PF00154 recA bacterial DNA recombination protein Chro_1731 PF02601 Exonuclease VII, large subunit Chro_1731 PF13742 OB-fold nucleic acid binding domain Chro_1732 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Chro_1732 PF12708 Pectate lyase superfamily protein Chro_1732 PF08548 Peptidase M10 serralysin C terminal Chro_1733 PF02609 Exonuclease VII small subunit Chro_1734 PF04960 Glutaminase Chro_1737 PF01678 Diaminopimelate epimerase Chro_1738 PF02754 Cysteine-rich domain Chro_1739 PF00550 Phosphopantetheine attachment site Chro_1740 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_1740 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_1741 PF02779 Transketolase, pyrimidine binding domain Chro_1741 PF00456 Transketolase, thiamine diphosphate binding domain Chro_1741 PF02780 Transketolase, C-terminal domain Chro_1742 PF00455 DeoR C terminal sensor domain Chro_1742 PF08220 DeoR-like helix-turn-helix domain Chro_1743 PF00456 Transketolase, thiamine diphosphate binding domain Chro_1743 PF02780 Transketolase, C-terminal domain Chro_1743 PF02779 Transketolase, pyrimidine binding domain Chro_1744 PF01678 Diaminopimelate epimerase Chro_1747 PF00916 Sulfate permease family Chro_1747 PF01740 STAS domain Chro_1750 PF00999 Sodium/hydrogen exchanger family Chro_1752 PF13426 PAS domain Chro_1752 PF08448 PAS fold Chro_1752 PF00512 His Kinase A (phospho-acceptor) domain Chro_1752 PF00072 Response regulator receiver domain Chro_1752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1754 PF06745 KaiC Chro_1755 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_1755 PF07683 Cobalamin synthesis protein cobW C-terminal domain Chro_1761 PF10792 Protein of unknown function (DUF2605) Chro_1762 PF03129 Anticodon binding domain Chro_1762 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Chro_1762 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Chro_1764 PF01209 ubiE/COQ5 methyltransferase family Chro_1766 PF00502 Phycobilisome protein Chro_1768 PF00120 Glutamine synthetase, catalytic domain Chro_1768 PF03951 Glutamine synthetase, beta-Grasp domain Chro_1772 PF00561 alpha/beta hydrolase fold Chro_1772 PF00364 Biotin-requiring enzyme Chro_1773 PF01594 AI-2E family transporter Chro_1774 PF03775 Septum formation inhibitor MinC, C-terminal domain Chro_1775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Chro_1776 PF03776 Septum formation topological specificity factor MinE Chro_1779 PF06472 ABC transporter transmembrane region 2 Chro_1779 PF00005 ABC transporter Chro_1780 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) Chro_1783 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Chro_1784 PF05067 Manganese containing catalase Chro_1786 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Chro_1786 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_1788 PF08240 Alcohol dehydrogenase GroES-like domain Chro_1788 PF13823 Alcohol dehydrogenase GroES-associated Chro_1788 PF00107 Zinc-binding dehydrogenase Chro_1790 PF08240 Alcohol dehydrogenase GroES-like domain Chro_1790 PF13823 Alcohol dehydrogenase GroES-associated Chro_1790 PF00107 Zinc-binding dehydrogenase Chro_1792 PF01965 DJ-1/PfpI family Chro_1795 PF00174 Oxidoreductase molybdopterin binding domain Chro_1796 PF01783 Ribosomal L32p protein family Chro_1799 PF17770 Ribonuclease J C-terminal domain Chro_1799 PF00753 Metallo-beta-lactamase superfamily Chro_1799 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Chro_1800 PF00701 Dihydrodipicolinate synthetase family Chro_1801 PF02774 Semialdehyde dehydrogenase, dimerisation domain Chro_1801 PF01118 Semialdehyde dehydrogenase, NAD binding domain Chro_1802 PF05697 Bacterial trigger factor protein (TF) Chro_1802 PF05698 Bacterial trigger factor protein (TF) C-terminus Chro_1802 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Chro_1803 PF00574 Clp protease Chro_1805 PF00561 alpha/beta hydrolase fold Chro_1806 PF00881 Nitroreductase family Chro_1807 PF00392 Bacterial regulatory proteins, gntR family Chro_1808 PF01738 Dienelactone hydrolase family Chro_1809 PF00575 S1 RNA binding domain Chro_1811 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1812 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1813 PF01547 Bacterial extracellular solute-binding protein Chro_1814 PF02447 GntP family permease Chro_1815 PF05685 Putative restriction endonuclease Chro_1817 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Chro_1817 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Chro_1818 PF00512 His Kinase A (phospho-acceptor) domain Chro_1818 PF08448 PAS fold Chro_1818 PF13426 PAS domain Chro_1818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1818 PF00072 Response regulator receiver domain Chro_1819 PF04966 Carbohydrate-selective porin, OprB family Chro_1819 PF00395 S-layer homology domain Chro_1820 PF17265 Family of unknown function (DUF5331) Chro_1822 PF04025 Domain of unknown function (DUF370) Chro_1824 PF02605 Photosystem I reaction centre subunit XI Chro_1825 PF01701 Photosystem I reaction centre subunit IX / PsaJ Chro_1826 PF01701 Photosystem I reaction centre subunit IX / PsaJ Chro_1827 PF02507 Photosystem I reaction centre subunit III Chro_1828 PF00814 Glycoprotease family Chro_1830 PF01384 Phosphate transporter family Chro_1832 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Chro_1833 PF00374 Nickel-dependent hydrogenase Chro_1835 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Chro_1836 PF02567 Phenazine biosynthesis-like protein Chro_1847 PF00953 Glycosyl transferase family 4 Chro_1848 PF01551 Peptidase family M23 Chro_1848 PF04225 Opacity-associated protein A LysM-like domain Chro_1849 PF00588 SpoU rRNA Methylase family Chro_1850 PF04107 Glutamate-cysteine ligase family 2(GCS2) Chro_1852 PF02653 Branched-chain amino acid transport system / permease component Chro_1854 PF13407 Periplasmic binding protein domain Chro_1855 PF02562 PhoH-like protein Chro_1857 PF00886 Ribosomal protein S16 Chro_1858 PF02978 Signal peptide binding domain Chro_1858 PF02881 SRP54-type protein, helical bundle domain Chro_1858 PF00448 SRP54-type protein, GTPase domain Chro_1860 PF00128 Alpha amylase, catalytic domain Chro_1860 PF00686 Starch binding domain Chro_1860 PF01833 IPT/TIG domain Chro_1863 PF07715 TonB-dependent Receptor Plug Domain Chro_1863 PF00593 TonB dependent receptor Chro_1865 PF00989 PAS fold Chro_1865 PF00512 His Kinase A (phospho-acceptor) domain Chro_1865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1865 PF16736 Single Cache-like Chro_1868 PF01507 Phosphoadenosine phosphosulfate reductase family Chro_1872 PF10693 Protein of unknown function (DUF2499) Chro_1876 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Chro_1877 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Chro_1878 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Chro_1879 PF00731 AIR carboxylase Chro_1880 PF00535 Glycosyl transferase family 2 Chro_1881 PF02885 Glycosyl transferase family, helical bundle domain Chro_1881 PF00591 Glycosyl transferase family, a/b domain Chro_1882 PF00486 Transcriptional regulatory protein, C terminal Chro_1882 PF00072 Response regulator receiver domain Chro_1883 PF00512 His Kinase A (phospho-acceptor) domain Chro_1883 PF18415 Histidine kinase receptor ArcB trans-membrane domain Chro_1883 PF00072 Response regulator receiver domain Chro_1883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1883 PF01627 Hpt domain Chro_1883 PF00989 PAS fold Chro_1884 PF00975 Thioesterase domain Chro_1884 PF00501 AMP-binding enzyme Chro_1884 PF13193 AMP-binding enzyme C-terminal domain Chro_1884 PF00668 Condensation domain Chro_1884 PF08241 Methyltransferase domain Chro_1884 PF00391 PEP-utilising enzyme, mobile domain Chro_1884 PF00550 Phosphopantetheine attachment site Chro_1885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_1885 PF00072 Response regulator receiver domain Chro_1885 PF13426 PAS domain Chro_1886 PF00990 Diguanylate cyclase, GGDEF domain Chro_1886 PF00563 EAL domain Chro_1886 PF03707 Bacterial signalling protein N terminal repeat Chro_1887 PF01648 4'-phosphopantetheinyl transferase superfamily Chro_1890 PF00593 TonB dependent receptor Chro_1890 PF07715 TonB-dependent Receptor Plug Domain Chro_1891 PF00593 TonB dependent receptor Chro_1891 PF07715 TonB-dependent Receptor Plug Domain Chro_1896 PF16916 Dimerisation domain of Zinc Transporter Chro_1896 PF01545 Cation efflux family Chro_1897 PF03069 Acetamidase/Formamidase family Chro_1898 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_1898 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chro_1898 PF00205 Thiamine pyrophosphate enzyme, central domain Chro_1899 PF00171 Aldehyde dehydrogenase family Chro_1900 PF00486 Transcriptional regulatory protein, C terminal Chro_1900 PF00072 Response regulator receiver domain Chro_1902 PF00072 Response regulator receiver domain Chro_1904 PF00107 Zinc-binding dehydrogenase Chro_1904 PF08240 Alcohol dehydrogenase GroES-like domain Chro_1905 PF00069 Protein kinase domain Chro_1906 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_1906 PF17806 Sarcosine oxidase A3 domain Chro_1906 PF01571 Aminomethyltransferase folate-binding domain Chro_1906 PF08669 Glycine cleavage T-protein C-terminal barrel domain Chro_1907 PF01940 Integral membrane protein DUF92 Chro_1910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_1913 PF00534 Glycosyl transferases group 1 Chro_1913 PF13439 Glycosyltransferase Family 4 Chro_1914 PF03239 Iron permease FTR1 family Chro_1917 PF07732 Multicopper oxidase Chro_1918 PF00005 ABC transporter Chro_1921 PF01891 Cobalt uptake substrate-specific transmembrane region Chro_1922 PF00550 Phosphopantetheine attachment site Chro_1922 PF00550 Phosphopantetheine attachment site Chro_1922 PF07993 Male sterility protein Chro_1922 PF07993 Male sterility protein Chro_1922 PF13193 AMP-binding enzyme C-terminal domain Chro_1922 PF00501 AMP-binding enzyme Chro_1922 PF00501 AMP-binding enzyme Chro_1922 PF13193 AMP-binding enzyme C-terminal domain Chro_1922 PF00668 Condensation domain Chro_1922 PF00668 Condensation domain Chro_1924 PF00550 Phosphopantetheine attachment site Chro_1924 PF00668 Condensation domain Chro_1924 PF13193 AMP-binding enzyme C-terminal domain Chro_1924 PF00501 AMP-binding enzyme Chro_1925 PF13193 AMP-binding enzyme C-terminal domain Chro_1925 PF00550 Phosphopantetheine attachment site Chro_1925 PF00668 Condensation domain Chro_1925 PF00501 AMP-binding enzyme Chro_1932 PF03976 Polyphosphate kinase 2 (PPK2) Chro_1933 PF04055 Radical SAM superfamily Chro_1936 PF02016 LD-carboxypeptidase N-terminal domain Chro_1936 PF17676 LD-carboxypeptidase C-terminal domain Chro_1937 PF00862 Sucrose synthase Chro_1937 PF00534 Glycosyl transferases group 1 Chro_1938 PF00892 EamA-like transporter family Chro_1939 PF01343 Peptidase family S49 Chro_1941 PF07687 Peptidase dimerisation domain Chro_1941 PF01546 Peptidase family M20/M25/M40 Chro_1943 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Chro_1943 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Chro_1944 PF00941 FAD binding domain in molybdopterin dehydrogenase Chro_1944 PF03450 CO dehydrogenase flavoprotein C-terminal domain Chro_1945 PF00796 Photosystem I reaction centre subunit VIII Chro_1947 PF02419 PsbL protein Chro_1949 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Chro_1949 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit Chro_1952 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Chro_1953 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Chro_1954 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Chro_1957 PF00149 Calcineurin-like phosphoesterase Chro_1958 PF01435 Peptidase family M48 Chro_1960 PF12697 Alpha/beta hydrolase family Chro_1962 PF01522 Polysaccharide deacetylase Chro_1963 PF04545 Sigma-70, region 4 Chro_1963 PF04539 Sigma-70 region 3 Chro_1963 PF00140 Sigma-70 factor, region 1.2 Chro_1963 PF04542 Sigma-70 region 2 Chro_1964 PF00762 Ferrochelatase Chro_1966 PF00005 ABC transporter Chro_1966 PF17912 MalK OB fold domain Chro_1967 PF00171 Aldehyde dehydrogenase family Chro_1968 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1969 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1971 PF17792 ThiD2 family Chro_1971 PF02581 Thiamine monophosphate synthase Chro_1974 PF00390 Malic enzyme, N-terminal domain Chro_1974 PF03949 Malic enzyme, NAD binding domain Chro_1975 PF10502 Signal peptidase, peptidase S26 Chro_1976 PF00501 AMP-binding enzyme Chro_1978 PF00364 Biotin-requiring enzyme Chro_1978 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Chro_1978 PF02817 e3 binding domain Chro_1980 PF00486 Transcriptional regulatory protein, C terminal Chro_1980 PF00072 Response regulator receiver domain Chro_1980 PF01627 Hpt domain Chro_1981 PF00072 Response regulator receiver domain Chro_1981 PF00486 Transcriptional regulatory protein, C terminal Chro_1990 PF01425 Amidase Chro_1991 PF00528 Binding-protein-dependent transport system inner membrane component Chro_1999 PF00092 von Willebrand factor type A domain Chro_2000 PF00072 Response regulator receiver domain Chro_2000 PF14332 Domain of unknown function (DUF4388) Chro_2003 PF00266 Aminotransferase class-V Chro_2004 PF01458 Uncharacterized protein family (UPF0051) Chro_2005 PF00005 ABC transporter Chro_2006 PF01458 Uncharacterized protein family (UPF0051) Chro_2009 PF07238 PilZ domain Chro_2009 PF00535 Glycosyl transferase family 2 Chro_2009 PF03552 Cellulose synthase Chro_2009 PF03170 Bacterial cellulose synthase subunit Chro_2012 PF00892 EamA-like transporter family Chro_2015 PF00664 ABC transporter transmembrane region Chro_2015 PF00005 ABC transporter Chro_2016 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Chro_2016 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_2017 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_2017 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Chro_2019 PF05728 Uncharacterised protein family (UPF0227) Chro_2025 PF01339 CheB methylesterase Chro_2025 PF01739 CheR methyltransferase, SAM binding domain Chro_2025 PF03705 CheR methyltransferase, all-alpha domain Chro_2025 PF08448 PAS fold Chro_2026 PF13426 PAS domain Chro_2026 PF08448 PAS fold Chro_2026 PF00512 His Kinase A (phospho-acceptor) domain Chro_2026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2026 PF00072 Response regulator receiver domain Chro_2029 PF00072 Response regulator receiver domain Chro_2029 PF13426 PAS domain Chro_2029 PF08448 PAS fold Chro_2029 PF00512 His Kinase A (phospho-acceptor) domain Chro_2029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2033 PF12894 Anaphase-promoting complex subunit 4 WD40 domain Chro_2033 PF00400 WD domain, G-beta repeat Chro_2034 PF03562 MltA specific insert domain Chro_2034 PF06725 3D domain Chro_2036 PF16639 Apocytochrome F, N-terminal Chro_2036 PF01333 Apocytochrome F, C-terminal Chro_2037 PF00355 Rieske [2Fe-2S] domain Chro_2040 PF03631 Virulence factor BrkB Chro_2041 PF00291 Pyridoxal-phosphate dependent enzyme Chro_2045 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Chro_2048 PF01513 ATP-NAD kinase Chro_2049 PF00072 Response regulator receiver domain Chro_2049 PF00486 Transcriptional regulatory protein, C terminal Chro_2052 PF00140 Sigma-70 factor, region 1.2 Chro_2052 PF04542 Sigma-70 region 2 Chro_2052 PF04545 Sigma-70, region 4 Chro_2052 PF04539 Sigma-70 region 3 Chro_2056 PF02469 Fasciclin domain Chro_2057 PF13181 Tetratricopeptide repeat Chro_2057 PF00535 Glycosyl transferase family 2 Chro_2065 PF01975 Survival protein SurE Chro_2066 PF06574 FAD synthetase Chro_2066 PF01687 Riboflavin kinase Chro_2070 PF18152 DAHP synthase ferredoxin-like domain Chro_2070 PF00793 DAHP synthetase I family Chro_2072 PF00072 Response regulator receiver domain Chro_2074 PF01545 Cation efflux family Chro_2077 PF17871 AAA lid domain Chro_2077 PF10431 C-terminal, D2-small domain, of ClpB protein Chro_2077 PF07724 AAA domain (Cdc48 subfamily) Chro_2077 PF00004 ATPase family associated with various cellular activities (AAA) Chro_2077 PF02861 Clp amino terminal domain, pathogenicity island component Chro_2078 PF13426 PAS domain Chro_2078 PF00512 His Kinase A (phospho-acceptor) domain Chro_2078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2078 PF00672 HAMP domain Chro_2080 PF00106 short chain dehydrogenase Chro_2082 PF08240 Alcohol dehydrogenase GroES-like domain Chro_2083 PF00012 Hsp70 protein Chro_2084 PF06314 Acetoacetate decarboxylase (ADC) Chro_2085 PF00486 Transcriptional regulatory protein, C terminal Chro_2085 PF00072 Response regulator receiver domain Chro_2087 PF00773 RNB domain Chro_2088 PF01084 Ribosomal protein S18 Chro_2090 PF00994 Probable molybdopterin binding domain Chro_2090 PF03453 MoeA N-terminal region (domain I and II) Chro_2090 PF03454 MoeA C-terminal region (domain IV) Chro_2092 PF00266 Aminotransferase class-V Chro_2095 PF01594 AI-2E family transporter Chro_2097 PF01434 Peptidase family M41 Chro_2097 PF17862 AAA+ lid domain Chro_2097 PF00004 ATPase family associated with various cellular activities (AAA) Chro_2098 PF03328 HpcH/HpaI aldolase/citrate lyase family Chro_2099 PF03749 Sugar fermentation stimulation protein RE domain Chro_2099 PF17746 SfsA N-terminal OB domain Chro_2101 PF13533 Biotin-lipoyl like Chro_2102 PF00664 ABC transporter transmembrane region Chro_2102 PF00005 ABC transporter Chro_2102 PF03412 Peptidase C39 family Chro_2103 PF00330 Aconitase family (aconitate hydratase) Chro_2105 PF00294 pfkB family carbohydrate kinase Chro_2106 PF00072 Response regulator receiver domain Chro_2106 PF00196 Bacterial regulatory proteins, luxR family Chro_2108 PF02427 Photosystem I reaction centre subunit IV / PsaE Chro_2109 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Chro_2109 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Chro_2109 PF06827 Zinc finger found in FPG and IleRS Chro_2110 PF11910 Cyanobacterial and plant NDH-1 subunit O Chro_2112 PF13847 Methyltransferase domain Chro_2114 PF02542 YgbB family Chro_2121 PF00990 Diguanylate cyclase, GGDEF domain Chro_2121 PF00072 Response regulator receiver domain Chro_2125 PF02397 Bacterial sugar transferase Chro_2126 PF00501 AMP-binding enzyme Chro_2126 PF13193 AMP-binding enzyme C-terminal domain Chro_2126 PF00668 Condensation domain Chro_2126 PF00550 Phosphopantetheine attachment site Chro_2128 PF00535 Glycosyl transferase family 2 Chro_2130 PF00534 Glycosyl transferases group 1 Chro_2130 PF13439 Glycosyltransferase Family 4 Chro_2131 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_2133 PF13614 AAA domain Chro_2133 PF13807 G-rich domain on putative tyrosine kinase Chro_2133 PF02706 Chain length determinant protein Chro_2138 PF00873 AcrB/AcrD/AcrF family Chro_2149 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_2152 PF00534 Glycosyl transferases group 1 Chro_2154 PF00535 Glycosyl transferase family 2 Chro_2155 PF14667 Polysaccharide biosynthesis C-terminal domain Chro_2155 PF01943 Polysaccharide biosynthesis protein Chro_2158 PF13614 AAA domain Chro_2159 PF02397 Bacterial sugar transferase Chro_2160 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_2160 PF12804 MobA-like NTP transferase domain Chro_2161 PF02625 XdhC and CoxI family Chro_2161 PF13478 XdhC Rossmann domain Chro_2162 PF01799 [2Fe-2S] binding domain Chro_2162 PF00111 2Fe-2S iron-sulfur cluster binding domain Chro_2164 PF00106 short chain dehydrogenase Chro_2169 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_2169 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chro_2169 PF00205 Thiamine pyrophosphate enzyme, central domain Chro_2172 PF02446 4-alpha-glucanotransferase Chro_2173 PF08450 SMP-30/Gluconolactonase/LRE-like region Chro_2175 PF00230 Major intrinsic protein Chro_2177 PF05199 GMC oxidoreductase Chro_2177 PF00732 GMC oxidoreductase Chro_2179 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Chro_2179 PF00128 Alpha amylase, catalytic domain Chro_2181 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_2182 PF13426 PAS domain Chro_2182 PF13188 PAS domain Chro_2182 PF00989 PAS fold Chro_2182 PF00512 His Kinase A (phospho-acceptor) domain Chro_2182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2187 PF00950 ABC 3 transport family Chro_2188 PF01022 Bacterial regulatory protein, arsR family Chro_2189 PF13556 PucR C-terminal helix-turn-helix domain Chro_2189 PF05651 Putative sugar diacid recognition Chro_2189 PF17853 GGDEF-like domain Chro_2190 PF00534 Glycosyl transferases group 1 Chro_2190 PF13439 Glycosyltransferase Family 4 Chro_2191 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Chro_2194 PF13580 SIS domain Chro_2197 PF01467 Cytidylyltransferase-like Chro_2197 PF00294 pfkB family carbohydrate kinase Chro_2200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Chro_2201 PF13426 PAS domain Chro_2201 PF08448 PAS fold Chro_2201 PF00072 Response regulator receiver domain Chro_2201 PF00512 His Kinase A (phospho-acceptor) domain Chro_2201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2202 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Chro_2202 PF00749 tRNA synthetases class I (E and Q), catalytic domain Chro_2203 PF00230 Major intrinsic protein Chro_2204 PF08865 Domain of unknown function (DUF1830) Chro_2211 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Chro_2211 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Chro_2219 PF00196 Bacterial regulatory proteins, luxR family Chro_2219 PF00072 Response regulator receiver domain Chro_2220 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB Chro_2220 PF08448 PAS fold Chro_2220 PF00512 His Kinase A (phospho-acceptor) domain Chro_2220 PF00672 HAMP domain Chro_2220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2221 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Chro_2221 PF00156 Phosphoribosyl transferase domain Chro_2223 PF01209 ubiE/COQ5 methyltransferase family Chro_2226 PF02310 B12 binding domain Chro_2226 PF02574 Homocysteine S-methyltransferase Chro_2226 PF00809 Pterin binding enzyme Chro_2226 PF02965 Vitamin B12 dependent methionine synthase, activation domain Chro_2226 PF02607 B12 binding domain Chro_2230 PF00005 ABC transporter Chro_2230 PF17845 FbpC C-terminal regulatory nucleotide binding domain Chro_2231 PF01588 Putative tRNA binding domain Chro_2232 PF13411 MerR HTH family regulatory protein Chro_2232 PF07739 TipAS antibiotic-recognition domain Chro_2233 PF08544 GHMP kinases C terminal Chro_2233 PF00288 GHMP kinases N terminal domain Chro_2241 PF00005 ABC transporter Chro_2243 PF10609 NUBPL iron-transfer P-loop NTPase Chro_2244 PF00805 Pentapeptide repeats (8 copies) Chro_2244 PF00069 Protein kinase domain Chro_2250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Chro_2251 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Chro_2252 PF13237 4Fe-4S dicluster domain Chro_2254 PF00285 Citrate synthase, C-terminal domain Chro_2255 PF00300 Histidine phosphatase superfamily (branch 1) Chro_2259 PF00842 Alanine racemase, C-terminal domain Chro_2259 PF01168 Alanine racemase, N-terminal domain Chro_2260 PF00534 Glycosyl transferases group 1 Chro_2260 PF13439 Glycosyltransferase Family 4 Chro_2265 PF07977 FabA-like domain Chro_2266 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Chro_2267 PF07244 Surface antigen variable number repeat Chro_2267 PF01103 Surface antigen Chro_2268 PF01259 SAICAR synthetase Chro_2269 PF01522 Polysaccharide deacetylase Chro_2269 PF14883 Hypothetical glycosyl hydrolase family 13 Chro_2270 PF00092 von Willebrand factor type A domain Chro_2271 PF04434 SWIM zinc finger Chro_2272 PF00271 Helicase conserved C-terminal domain Chro_2272 PF12419 SNF2 Helicase protein Chro_2272 PF00176 SNF2 family N-terminal domain Chro_2277 PF01850 PIN domain Chro_2281 PF07963 Prokaryotic N-terminal methylation motif Chro_2281 PF14245 Type IV pilin PilA Chro_2282 PF07963 Prokaryotic N-terminal methylation motif Chro_2282 PF08334 Type II secretion system (T2SS), protein G Chro_2287 PF13439 Glycosyltransferase Family 4 Chro_2287 PF00534 Glycosyl transferases group 1 Chro_2289 PF16363 GDP-mannose 4,6 dehydratase Chro_2292 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Chro_2295 PF00069 Protein kinase domain Chro_2295 PF00805 Pentapeptide repeats (8 copies) Chro_2297 PF00849 RNA pseudouridylate synthase Chro_2299 PF13439 Glycosyltransferase Family 4 Chro_2299 PF00534 Glycosyl transferases group 1 Chro_2300 PF13614 AAA domain Chro_2301 PF13439 Glycosyltransferase Family 4 Chro_2301 PF00534 Glycosyl transferases group 1 Chro_2303 PF01627 Hpt domain Chro_2303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2303 PF02895 Signal transducing histidine kinase, homodimeric domain Chro_2303 PF01584 CheW-like domain Chro_2303 PF07194 P2 response regulator binding domain Chro_2304 PF01590 GAF domain Chro_2304 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_2309 PF12697 Alpha/beta hydrolase family Chro_2313 PF07715 TonB-dependent Receptor Plug Domain Chro_2313 PF00593 TonB dependent receptor Chro_2317 PF08386 TAP-like protein Chro_2317 PF00561 alpha/beta hydrolase fold Chro_2321 PF02881 SRP54-type protein, helical bundle domain Chro_2321 PF00448 SRP54-type protein, GTPase domain Chro_2322 PF07228 Stage II sporulation protein E (SpoIIE) Chro_2322 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain Chro_2325 PF13344 Haloacid dehalogenase-like hydrolase Chro_2325 PF00293 NUDIX domain Chro_2326 PF10369 Small subunit of acetolactate synthase Chro_2328 PF08386 TAP-like protein Chro_2328 PF00561 alpha/beta hydrolase fold Chro_2331 PF00892 EamA-like transporter family Chro_2332 PF00107 Zinc-binding dehydrogenase Chro_2332 PF08240 Alcohol dehydrogenase GroES-like domain Chro_2333 PF00781 Diacylglycerol kinase catalytic domain Chro_2333 PF02142 MGS-like domain Chro_2341 PF11791 Aconitate B N-terminal domain Chro_2341 PF06434 Aconitate hydratase 2 N-terminus Chro_2341 PF00330 Aconitase family (aconitate hydratase) Chro_2342 PF00111 2Fe-2S iron-sulfur cluster binding domain Chro_2344 PF11805 Protein of unknown function (DUF3326) Chro_2346 PF02585 GlcNAc-PI de-N-acetylase Chro_2347 PF00483 Nucleotidyl transferase Chro_2348 PF08421 Putative zinc binding domain Chro_2348 PF08484 C-methyltransferase C-terminal domain Chro_2349 PF00535 Glycosyl transferase family 2 Chro_2350 PF00664 ABC transporter transmembrane region Chro_2350 PF00005 ABC transporter Chro_2352 PF00535 Glycosyl transferase family 2 Chro_2355 PF02687 FtsX-like permease family Chro_2355 PF12704 MacB-like periplasmic core domain Chro_2355 PF00005 ABC transporter Chro_2356 PF03976 Polyphosphate kinase 2 (PPK2) Chro_2358 PF00440 Bacterial regulatory proteins, tetR family Chro_2361 PF00528 Binding-protein-dependent transport system inner membrane component Chro_2362 PF00551 Formyl transferase Chro_2363 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_2364 PF16363 GDP-mannose 4,6 dehydratase Chro_2367 PF02706 Chain length determinant protein Chro_2367 PF13807 G-rich domain on putative tyrosine kinase Chro_2367 PF13614 AAA domain Chro_2369 PF00005 ABC transporter Chro_2369 PF14524 Wzt C-terminal domain Chro_2374 PF00535 Glycosyl transferase family 2 Chro_2377 PF00535 Glycosyl transferase family 2 Chro_2378 PF13439 Glycosyltransferase Family 4 Chro_2378 PF00534 Glycosyl transferases group 1 Chro_2381 PF00535 Glycosyl transferase family 2 Chro_2383 PF13439 Glycosyltransferase Family 4 Chro_2383 PF00534 Glycosyl transferases group 1 Chro_2384 PF00534 Glycosyl transferases group 1 Chro_2384 PF13439 Glycosyltransferase Family 4 Chro_2385 PF06452 Carbohydrate family 9 binding domain-like Chro_2385 PF02018 Carbohydrate binding domain Chro_2385 PF00331 Glycosyl hydrolase family 10 Chro_2387 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Chro_2389 PF01593 Flavin containing amine oxidoreductase Chro_2389 PF02027 RolB/RolC glucosidase family Chro_2393 PF00326 Prolyl oligopeptidase family Chro_2393 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Chro_2394 PF02872 5'-nucleotidase, C-terminal domain Chro_2394 PF00149 Calcineurin-like phosphoesterase Chro_2397 PF01812 5-formyltetrahydrofolate cyclo-ligase family Chro_2398 PF00440 Bacterial regulatory proteins, tetR family Chro_2399 PF12697 Alpha/beta hydrolase family Chro_2404 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Chro_2406 PF00657 GDSL-like Lipase/Acylhydrolase Chro_2410 PF00873 AcrB/AcrD/AcrF family Chro_2412 PF00563 EAL domain Chro_2412 PF00360 Phytochrome region Chro_2412 PF00990 Diguanylate cyclase, GGDEF domain Chro_2412 PF01590 GAF domain Chro_2413 PF00072 Response regulator receiver domain Chro_2414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2414 PF00512 His Kinase A (phospho-acceptor) domain Chro_2414 PF08448 PAS fold Chro_2414 PF00072 Response regulator receiver domain Chro_2414 PF13188 PAS domain Chro_2415 PF13607 Succinyl-CoA ligase like flavodoxin domain Chro_2415 PF13380 CoA binding domain Chro_2415 PF00583 Acetyltransferase (GNAT) family Chro_2416 PF03466 LysR substrate binding domain Chro_2416 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Chro_2423 PF00462 Glutaredoxin Chro_2423 PF08534 Redoxin Chro_2426 PF00005 ABC transporter Chro_2426 PF00571 CBS domain Chro_2427 PF00528 Binding-protein-dependent transport system inner membrane component Chro_2428 PF01634 ATP phosphoribosyltransferase Chro_2429 PF00486 Transcriptional regulatory protein, C terminal Chro_2429 PF00072 Response regulator receiver domain Chro_2431 PF04055 Radical SAM superfamily Chro_2431 PF06968 Biotin and Thiamin Synthesis associated domain Chro_2432 PF00202 Aminotransferase class-III Chro_2439 PF00488 MutS domain V Chro_2439 PF01713 Smr domain Chro_2440 PF00478 IMP dehydrogenase / GMP reductase domain Chro_2441 PF00085 Thioredoxin Chro_2450 PF00593 TonB dependent receptor Chro_2450 PF07715 TonB-dependent Receptor Plug Domain Chro_2451 PF00593 TonB dependent receptor Chro_2451 PF07715 TonB-dependent Receptor Plug Domain Chro_2456 PF00067 Cytochrome P450 Chro_2459 PF02806 Alpha amylase, C-terminal all-beta domain Chro_2459 PF00128 Alpha amylase, catalytic domain Chro_2459 PF00686 Starch binding domain Chro_2460 PF00534 Glycosyl transferases group 1 Chro_2460 PF13439 Glycosyltransferase Family 4 Chro_2461 PF16363 GDP-mannose 4,6 dehydratase Chro_2464 PF00072 Response regulator receiver domain Chro_2464 PF00486 Transcriptional regulatory protein, C terminal Chro_2465 PF02397 Bacterial sugar transferase Chro_2467 PF00534 Glycosyl transferases group 1 Chro_2467 PF13439 Glycosyltransferase Family 4 Chro_2468 PF00664 ABC transporter transmembrane region Chro_2468 PF00005 ABC transporter Chro_2470 PF16363 GDP-mannose 4,6 dehydratase Chro_2471 PF00438 S-adenosylmethionine synthetase, N-terminal domain Chro_2471 PF02773 S-adenosylmethionine synthetase, C-terminal domain Chro_2471 PF02772 S-adenosylmethionine synthetase, central domain Chro_2472 PF02219 Methylenetetrahydrofolate reductase Chro_2472 PF02574 Homocysteine S-methyltransferase Chro_2476 PF01380 SIS domain Chro_2476 PF00571 CBS domain Chro_2477 PF02348 Cytidylyltransferase Chro_2479 PF01501 Glycosyl transferase family 8 Chro_2480 PF00793 DAHP synthetase I family Chro_2484 PF00535 Glycosyl transferase family 2 Chro_2492 PF05239 PRC-barrel domain Chro_2492 PF09557 Domain of unknown function (DUF2382) Chro_2499 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Chro_2503 PF02310 B12 binding domain Chro_2503 PF13282 Domain of unknown function (DUF4070) Chro_2503 PF04055 Radical SAM superfamily Chro_2507 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Chro_2509 PF00502 Phycobilisome protein Chro_2510 PF00762 Ferrochelatase Chro_2512 PF02469 Fasciclin domain Chro_2519 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Chro_2520 PF13186 Iron-sulfur cluster-binding domain Chro_2520 PF04055 Radical SAM superfamily Chro_2522 PF09557 Domain of unknown function (DUF2382) Chro_2522 PF05239 PRC-barrel domain Chro_2523 PF01042 Endoribonuclease L-PSP Chro_2528 PF00877 NlpC/P60 family Chro_2528 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain Chro_2529 PF00535 Glycosyl transferase family 2 Chro_2530 PF07690 Major Facilitator Superfamily Chro_2532 PF00691 OmpA family Chro_2532 PF00223 Photosystem I psaA/psaB protein Chro_2534 PF03699 Uncharacterised protein family (UPF0182) Chro_2535 PF00486 Transcriptional regulatory protein, C terminal Chro_2535 PF00072 Response regulator receiver domain Chro_2536 PF00072 Response regulator receiver domain Chro_2536 PF00158 Sigma-54 interaction domain Chro_2536 PF02954 Bacterial regulatory protein, Fis family Chro_2540 PF01584 CheW-like domain Chro_2540 PF09078 CheY binding Chro_2540 PF01627 Hpt domain Chro_2540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2540 PF02895 Signal transducing histidine kinase, homodimeric domain Chro_2541 PF01612 3'-5' exonuclease Chro_2541 PF00570 HRDC domain Chro_2544 PF01253 Translation initiation factor SUI1 Chro_2545 PF01679 Proteolipid membrane potential modulator Chro_2546 PF12557 Cob(I)alamin adenosyltransferase N terminal Chro_2546 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Chro_2547 PF00850 Histone deacetylase domain Chro_2548 PF13409 Glutathione S-transferase, N-terminal domain Chro_2549 PF00664 ABC transporter transmembrane region Chro_2549 PF00005 ABC transporter Chro_2556 PF01497 Periplasmic binding protein Chro_2557 PF00593 TonB dependent receptor Chro_2557 PF07715 TonB-dependent Receptor Plug Domain Chro_2558 PF12833 Helix-turn-helix domain Chro_2558 PF14525 AraC-binding-like domain Chro_2561 PF07715 TonB-dependent Receptor Plug Domain Chro_2561 PF00593 TonB dependent receptor Chro_2563 PF01497 Periplasmic binding protein Chro_2568 PF01497 Periplasmic binding protein Chro_2569 PF00593 TonB dependent receptor Chro_2569 PF07715 TonB-dependent Receptor Plug Domain Chro_2570 PF12833 Helix-turn-helix domain Chro_2570 PF02311 AraC-like ligand binding domain Chro_2572 PF04542 Sigma-70 region 2 Chro_2572 PF04545 Sigma-70, region 4 Chro_2572 PF04539 Sigma-70 region 3 Chro_2573 PF13545 Crp-like helix-turn-helix domain Chro_2576 PF00550 Phosphopantetheine attachment site Chro_2576 PF00668 Condensation domain Chro_2576 PF00501 AMP-binding enzyme Chro_2576 PF13193 AMP-binding enzyme C-terminal domain Chro_2576 PF00975 Thioesterase domain Chro_2578 PF00501 AMP-binding enzyme Chro_2578 PF13193 AMP-binding enzyme C-terminal domain Chro_2578 PF00668 Condensation domain Chro_2578 PF00550 Phosphopantetheine attachment site Chro_2579 PF13193 AMP-binding enzyme C-terminal domain Chro_2579 PF00668 Condensation domain Chro_2579 PF08241 Methyltransferase domain Chro_2579 PF00391 PEP-utilising enzyme, mobile domain Chro_2579 PF00550 Phosphopantetheine attachment site Chro_2579 PF00975 Thioesterase domain Chro_2579 PF00501 AMP-binding enzyme Chro_2580 PF00668 Condensation domain Chro_2580 PF00550 Phosphopantetheine attachment site Chro_2580 PF00501 AMP-binding enzyme Chro_2580 PF13193 AMP-binding enzyme C-terminal domain Chro_2586 PF12327 FtsZ family, C-terminal domain Chro_2586 PF00091 Tubulin/FtsZ family, GTPase domain Chro_2591 PF01435 Peptidase family M48 Chro_2592 PF13619 KTSC domain Chro_2592 PF00152 tRNA synthetases class II (D, K and N) Chro_2592 PF01336 OB-fold nucleic acid binding domain Chro_2593 PF00005 ABC transporter Chro_2594 PF01965 DJ-1/PfpI family Chro_2595 PF13476 AAA domain Chro_2598 PF01145 SPFH domain / Band 7 family Chro_2600 PF00069 Protein kinase domain Chro_2603 PF00549 CoA-ligase Chro_2603 PF02629 CoA binding domain Chro_2604 PF08442 ATP-grasp domain Chro_2604 PF00549 CoA-ligase Chro_2605 PF00106 short chain dehydrogenase Chro_2606 PF01964 Radical SAM ThiC family Chro_2610 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Chro_2610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Chro_2612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2612 PF00512 His Kinase A (phospho-acceptor) domain Chro_2612 PF08448 PAS fold Chro_2612 PF13426 PAS domain Chro_2612 PF00072 Response regulator receiver domain Chro_2613 PF02913 FAD linked oxidases, C-terminal domain Chro_2613 PF01565 FAD binding domain Chro_2614 PF02754 Cysteine-rich domain Chro_2614 PF13183 4Fe-4S dicluster domain Chro_2617 PF00486 Transcriptional regulatory protein, C terminal Chro_2617 PF01627 Hpt domain Chro_2617 PF00072 Response regulator receiver domain Chro_2618 PF00582 Universal stress protein family Chro_2619 PF01654 Cytochrome bd terminal oxidase subunit I Chro_2621 PF00924 Mechanosensitive ion channel Chro_2622 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Chro_2622 PF05221 S-adenosyl-L-homocysteine hydrolase Chro_2623 PF09335 SNARE associated Golgi protein Chro_2624 PF00005 ABC transporter Chro_2624 PF00664 ABC transporter transmembrane region Chro_2628 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Chro_2629 PF02529 Cytochrome B6-F complex subunit 5 Chro_2632 PF01470 Pyroglutamyl peptidase Chro_2636 PF00583 Acetyltransferase (GNAT) family Chro_2638 PF07690 Major Facilitator Superfamily Chro_2639 PF10518 TAT (twin-arginine translocation) pathway signal sequence Chro_2639 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_2640 PF00069 Protein kinase domain Chro_2640 PF00805 Pentapeptide repeats (8 copies) Chro_2641 PF13545 Crp-like helix-turn-helix domain Chro_2645 PF08245 Mur ligase middle domain Chro_2645 PF02875 Mur ligase family, glutamate ligase domain Chro_2645 PF01225 Mur ligase family, catalytic domain Chro_2647 PF12833 Helix-turn-helix domain Chro_2648 PF02525 Flavodoxin-like fold Chro_2650 PF00850 Histone deacetylase domain Chro_2652 PF00521 DNA gyrase/topoisomerase IV, subunit A Chro_2652 PF03989 DNA gyrase C-terminal domain, beta-propeller Chro_2653 PF00795 Carbon-nitrogen hydrolase Chro_2657 PF00156 Phosphoribosyl transferase domain Chro_2660 PF05996 Ferredoxin-dependent bilin reductase Chro_2662 PF02545 Maf-like protein Chro_2663 PF13326 Photosystem II Pbs27 Chro_2665 PF00633 Helix-hairpin-helix motif Chro_2665 PF00730 HhH-GPD superfamily base excision DNA repair protein Chro_2665 PF14815 NUDIX domain Chro_2682 PF00440 Bacterial regulatory proteins, tetR family Chro_2684 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Chro_2684 PF13378 Enolase C-terminal domain-like Chro_2686 PF00563 EAL domain Chro_2686 PF00990 Diguanylate cyclase, GGDEF domain Chro_2686 PF03707 Bacterial signalling protein N terminal repeat Chro_2690 PF00672 HAMP domain Chro_2690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2690 PF00512 His Kinase A (phospho-acceptor) domain Chro_2690 PF13426 PAS domain Chro_2691 PF01627 Hpt domain Chro_2691 PF00486 Transcriptional regulatory protein, C terminal Chro_2691 PF00072 Response regulator receiver domain Chro_2693 PF03949 Malic enzyme, NAD binding domain Chro_2693 PF00390 Malic enzyme, N-terminal domain Chro_2694 PF00583 Acetyltransferase (GNAT) family Chro_2696 PF00764 Arginosuccinate synthase Chro_2697 PF02142 MGS-like domain Chro_2697 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Chro_2697 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Chro_2702 PF00574 Clp protease Chro_2703 PF00092 von Willebrand factor type A domain Chro_2706 PF00440 Bacterial regulatory proteins, tetR family Chro_2717 PF00528 Binding-protein-dependent transport system inner membrane component Chro_2718 PF00005 ABC transporter Chro_2722 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Chro_2722 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Chro_2724 PF00293 NUDIX domain Chro_2732 PF10011 Predicted membrane protein (DUF2254) Chro_2733 PF00582 Universal stress protein family Chro_2733 PF00999 Sodium/hydrogen exchanger family Chro_2735 PF00999 Sodium/hydrogen exchanger family Chro_2738 PF01339 CheB methylesterase Chro_2738 PF00072 Response regulator receiver domain Chro_2739 PF13089 Polyphosphate kinase N-terminal domain Chro_2739 PF17941 Polyphosphate kinase C-terminal domain 1 Chro_2739 PF13090 Polyphosphate kinase C-terminal domain 2 Chro_2739 PF02503 Polyphosphate kinase middle domain Chro_2744 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Chro_2744 PF10531 SLBB domain Chro_2744 PF02563 Polysaccharide biosynthesis/export protein Chro_2745 PF00475 Imidazoleglycerol-phosphate dehydratase Chro_2746 PF00924 Mechanosensitive ion channel Chro_2746 PF05552 Conserved TM helix Chro_2747 PF03092 BT1 family Chro_2748 PF03055 Retinal pigment epithelial membrane protein Chro_2750 PF00069 Protein kinase domain Chro_2751 PF00542 Ribosomal protein L7/L12 C-terminal domain Chro_2751 PF16320 Ribosomal protein L7/L12 dimerisation domain Chro_2753 PF00687 Ribosomal protein L1p/L10e family Chro_2755 PF02357 Transcription termination factor nusG Chro_2755 PF00467 KOW motif Chro_2756 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Chro_2757 PF01245 Ribosomal protein L19 Chro_2758 PF09367 CpeS-like protein Chro_2759 PF00487 Fatty acid desaturase Chro_2760 PF00258 Flavodoxin Chro_2760 PF01613 Flavin reductase like domain Chro_2763 PF01613 Flavin reductase like domain Chro_2763 PF00753 Metallo-beta-lactamase superfamily Chro_2766 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Chro_2768 PF05685 Putative restriction endonuclease Chro_2769 PF03033 Glycosyltransferase family 28 N-terminal domain Chro_2769 PF04101 Glycosyltransferase family 28 C-terminal domain Chro_2771 PF00106 short chain dehydrogenase Chro_2777 PF00873 AcrB/AcrD/AcrF family Chro_2778 PF00202 Aminotransferase class-III Chro_2779 PF00633 Helix-hairpin-helix motif Chro_2779 PF02132 RecR protein Chro_2779 PF13662 Toprim domain Chro_2781 PF01926 50S ribosome-binding GTPase Chro_2781 PF07650 KH domain Chro_2782 PF00365 Phosphofructokinase Chro_2783 PF00072 Response regulator receiver domain Chro_2785 PF01118 Semialdehyde dehydrogenase, NAD binding domain Chro_2785 PF02774 Semialdehyde dehydrogenase, dimerisation domain Chro_2786 PF00113 Enolase, C-terminal TIM barrel domain Chro_2786 PF03952 Enolase, N-terminal domain Chro_2787 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_2788 PF00004 ATPase family associated with various cellular activities (AAA) Chro_2788 PF17871 AAA lid domain Chro_2788 PF10431 C-terminal, D2-small domain, of ClpB protein Chro_2788 PF07724 AAA domain (Cdc48 subfamily) Chro_2788 PF02861 Clp amino terminal domain, pathogenicity island component Chro_2791 PF00535 Glycosyl transferase family 2 Chro_2792 PF01943 Polysaccharide biosynthesis protein Chro_2793 PF00535 Glycosyl transferase family 2 Chro_2793 PF01501 Glycosyl transferase family 8 Chro_2794 PF00535 Glycosyl transferase family 2 Chro_2796 PF00722 Glycosyl hydrolases family 16 Chro_2796 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Chro_2797 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Chro_2797 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Chro_2797 PF01189 16S rRNA methyltransferase RsmB/F Chro_2798 PF13439 Glycosyltransferase Family 4 Chro_2798 PF00534 Glycosyl transferases group 1 Chro_2799 PF00534 Glycosyl transferases group 1 Chro_2799 PF13439 Glycosyltransferase Family 4 Chro_2800 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_2801 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Chro_2801 PF00722 Glycosyl hydrolases family 16 Chro_2803 PF01047 MarR family Chro_2805 PF00719 Inorganic pyrophosphatase Chro_2806 PF02261 Aspartate decarboxylase Chro_2807 PF00484 Carbonic anhydrase Chro_2808 PF00591 Glycosyl transferase family, a/b domain Chro_2808 PF02885 Glycosyl transferase family, helical bundle domain Chro_2809 PF03466 LysR substrate binding domain Chro_2809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Chro_2810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Chro_2810 PF03120 NAD-dependent DNA ligase OB-fold domain Chro_2810 PF12826 Helix-hairpin-helix motif Chro_2810 PF01653 NAD-dependent DNA ligase adenylation domain Chro_2810 PF00533 BRCA1 C Terminus (BRCT) domain Chro_2812 PF03009 Glycerophosphoryl diester phosphodiesterase family Chro_2813 PF00512 His Kinase A (phospho-acceptor) domain Chro_2813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2813 PF00672 HAMP domain Chro_2813 PF13426 PAS domain Chro_2819 PF00392 Bacterial regulatory proteins, gntR family Chro_2819 PF07729 FCD domain Chro_2822 PF08865 Domain of unknown function (DUF1830) Chro_2825 PF13302 Acetyltransferase (GNAT) domain Chro_2826 PF03641 Possible lysine decarboxylase Chro_2827 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Chro_2827 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Chro_2827 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Chro_2827 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Chro_2829 PF01725 Ham1 family Chro_2830 PF00543 Nitrogen regulatory protein P-II Chro_2832 PF08543 Phosphomethylpyrimidine kinase Chro_2833 PF00487 Fatty acid desaturase Chro_2834 PF01625 Peptide methionine sulfoxide reductase Chro_2842 PF03070 TENA/THI-4/PQQC family Chro_2845 PF01022 Bacterial regulatory protein, arsR family Chro_2846 PF12849 PBP superfamily domain Chro_2847 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Chro_2847 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Chro_2850 PF01758 Sodium Bile acid symporter family Chro_2851 PF01451 Low molecular weight phosphotyrosine protein phosphatase Chro_2852 PF01022 Bacterial regulatory protein, arsR family Chro_2853 PF13847 Methyltransferase domain Chro_2859 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_2859 PF14759 Reductase C-terminal Chro_2862 PF04055 Radical SAM superfamily Chro_2864 PF13439 Glycosyltransferase Family 4 Chro_2866 PF08240 Alcohol dehydrogenase GroES-like domain Chro_2866 PF00107 Zinc-binding dehydrogenase Chro_2868 PF00210 Ferritin-like domain Chro_2870 PF00210 Ferritin-like domain Chro_2872 PF08486 Stage II sporulation protein Chro_2873 PF00111 2Fe-2S iron-sulfur cluster binding domain Chro_2875 PF01523 Putative modulator of DNA gyrase Chro_2877 PF00654 Voltage gated chloride channel Chro_2878 PF17275 Family of unknown function (DUF5340) Chro_2880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Chro_2880 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_2882 PF07715 TonB-dependent Receptor Plug Domain Chro_2882 PF00593 TonB dependent receptor Chro_2892 PF00400 WD domain, G-beta repeat Chro_2892 PF00931 NB-ARC domain Chro_2896 PF03965 Penicillinase repressor Chro_2902 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_2903 PF08241 Methyltransferase domain Chro_2904 PF00762 Ferrochelatase Chro_2907 PF01209 ubiE/COQ5 methyltransferase family Chro_2911 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Chro_2911 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Chro_2911 PF09317 Domain of unknown function (DUF1974) Chro_2912 PF02803 Thiolase, C-terminal domain Chro_2912 PF00108 Thiolase, N-terminal domain Chro_2913 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Chro_2913 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Chro_2913 PF00378 Enoyl-CoA hydratase/isomerase Chro_2914 PF00501 AMP-binding enzyme Chro_2915 PF00561 alpha/beta hydrolase fold Chro_2918 PF00155 Aminotransferase class I and II Chro_2920 PF01370 NAD dependent epimerase/dehydratase family Chro_2921 PF00155 Aminotransferase class I and II Chro_2928 PF00596 Class II Aldolase and Adducin N-terminal domain Chro_2929 PF03079 ARD/ARD' family Chro_2930 PF00111 2Fe-2S iron-sulfur cluster binding domain Chro_2932 PF13439 Glycosyltransferase Family 4 Chro_2932 PF00534 Glycosyl transferases group 1 Chro_2935 PF00892 EamA-like transporter family Chro_2936 PF01740 STAS domain Chro_2936 PF00916 Sulfate permease family Chro_2939 PF01208 Uroporphyrinogen decarboxylase (URO-D) Chro_2942 PF07690 Major Facilitator Superfamily Chro_2943 PF07690 Major Facilitator Superfamily Chro_2945 PF00902 Sec-independent protein translocase protein (TatC) Chro_2948 PF01464 Transglycosylase SLT domain Chro_2948 PF14718 Soluble lytic murein transglycosylase L domain Chro_2949 PF04029 2-phosphosulpholactate phosphatase Chro_2959 PF00809 Pterin binding enzyme Chro_2961 PF09367 CpeS-like protein Chro_2963 PF02277 Phosphoribosyltransferase Chro_2965 PF01975 Survival protein SurE Chro_2969 PF13614 AAA domain Chro_2971 PF00512 His Kinase A (phospho-acceptor) domain Chro_2971 PF13426 PAS domain Chro_2971 PF14827 Double sensory domain of two-component sensor kinase Chro_2971 PF00672 HAMP domain Chro_2971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_2975 PF02687 FtsX-like permease family Chro_2975 PF12704 MacB-like periplasmic core domain Chro_2975 PF00005 ABC transporter Chro_2976 PF16177 Acetyl-coenzyme A synthetase N-terminus Chro_2976 PF13193 AMP-binding enzyme C-terminal domain Chro_2976 PF00501 AMP-binding enzyme Chro_2977 PF03741 Integral membrane protein TerC family Chro_2978 PF00334 Nucleoside diphosphate kinase Chro_2979 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Chro_2979 PF17810 Arginine decarboxylase helical bundle domain Chro_2979 PF17944 Arginine decarboxylase C-terminal helical extension Chro_2980 PF00483 Nucleotidyl transferase Chro_2982 PF12631 MnmE helical domain Chro_2982 PF01926 50S ribosome-binding GTPase Chro_2982 PF10396 GTP-binding protein TrmE N-terminus Chro_2984 PF10742 Protein of unknown function (DUF2555) Chro_2985 PF04127 DNA / pantothenate metabolism flavoprotein Chro_2985 PF02441 Flavoprotein Chro_2987 PF00258 Flavodoxin Chro_2988 PF00421 Photosystem II protein Chro_2989 PF00421 Photosystem II protein Chro_2990 PF01738 Dienelactone hydrolase family Chro_2990 PF00156 Phosphoribosyl transferase domain Chro_2991 PF03167 Uracil DNA glycosylase superfamily Chro_2993 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Chro_2994 PF00579 tRNA synthetases class I (W and Y) Chro_2994 PF01479 S4 domain Chro_2995 PF00912 Transglycosylase Chro_2995 PF00905 Penicillin binding protein transpeptidase domain Chro_2996 PF17954 Quercetinase C-terminal cupin domain Chro_2996 PF02678 Pirin Chro_2997 PF13091 PLD-like domain Chro_2999 PF03562 MltA specific insert domain Chro_2999 PF06725 3D domain Chro_3001 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3001 PF07689 KaiB domain Chro_3001 PF00512 His Kinase A (phospho-acceptor) domain Chro_3003 PF00270 DEAD/DEAH box helicase Chro_3003 PF00271 Helicase conserved C-terminal domain Chro_3003 PF03461 TRCF domain Chro_3003 PF17757 UvrB interaction domain Chro_3003 PF02559 CarD-like/TRCF domain Chro_3004 PF01595 Cyclin M transmembrane N-terminal domain Chro_3004 PF00571 CBS domain Chro_3004 PF03471 Transporter associated domain Chro_3005 PF00534 Glycosyl transferases group 1 Chro_3005 PF08323 Starch synthase catalytic domain Chro_3006 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Chro_3006 PF03900 Porphobilinogen deaminase, C-terminal domain Chro_3008 PF01903 CbiX Chro_3010 PF00578 AhpC/TSA family Chro_3016 PF00248 Aldo/keto reductase family Chro_3017 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Chro_3018 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Chro_3019 PF09827 CRISPR associated protein Cas2 Chro_3020 PF01867 CRISPR associated protein Cas1 Chro_3028 PF02082 Transcriptional regulator Chro_3029 PF00360 Phytochrome region Chro_3029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3029 PF08446 PAS fold Chro_3029 PF01590 GAF domain Chro_3029 PF00512 His Kinase A (phospho-acceptor) domain Chro_3030 PF01627 Hpt domain Chro_3030 PF00512 His Kinase A (phospho-acceptor) domain Chro_3030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3030 PF00072 Response regulator receiver domain Chro_3031 PF00924 Mechanosensitive ion channel Chro_3031 PF12794 Mechanosensitive ion channel inner membrane domain 1 Chro_3031 PF12795 Mechanosensitive ion channel porin domain Chro_3032 PF16736 Single Cache-like Chro_3032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3032 PF00989 PAS fold Chro_3032 PF00512 His Kinase A (phospho-acceptor) domain Chro_3033 PF00072 Response regulator receiver domain Chro_3033 PF00486 Transcriptional regulatory protein, C terminal Chro_3036 PF00873 AcrB/AcrD/AcrF family Chro_3040 PF00376 MerR family regulatory protein Chro_3040 PF09278 MerR, DNA binding Chro_3042 PF00675 Insulinase (Peptidase family M16) Chro_3042 PF05193 Peptidase M16 inactive domain Chro_3044 PF00223 Photosystem I psaA/psaB protein Chro_3044 PF00691 OmpA family Chro_3049 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_3051 PF13188 PAS domain Chro_3051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3051 PF00512 His Kinase A (phospho-acceptor) domain Chro_3051 PF00989 PAS fold Chro_3052 PF00486 Transcriptional regulatory protein, C terminal Chro_3052 PF00072 Response regulator receiver domain Chro_3053 PF00196 Bacterial regulatory proteins, luxR family Chro_3053 PF00072 Response regulator receiver domain Chro_3054 PF14437 MafB19-like deaminase Chro_3055 PF02254 TrkA-N domain Chro_3055 PF07885 Ion channel Chro_3057 PF00310 Glutamine amidotransferases class-II Chro_3057 PF01493 GXGXG motif Chro_3057 PF01645 Conserved region in glutamate synthase Chro_3057 PF04898 Glutamate synthase central domain Chro_3058 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_3058 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Chro_3064 PF13619 KTSC domain Chro_3067 PF16582 Middle domain of thiamine pyrophosphate Chro_3067 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_3068 PF01557 Fumarylacetoacetate (FAA) hydrolase family Chro_3069 PF16166 Chloroplast import apparatus Tic20-like Chro_3071 PF00464 Serine hydroxymethyltransferase Chro_3072 PF00994 Probable molybdopterin binding domain Chro_3072 PF18146 Damage-inducible protein CinA KH domain Chro_3072 PF02464 Competence-damaged protein Chro_3074 PF01220 Dehydroquinase class II Chro_3076 PF01966 HD domain Chro_3076 PF07697 7TM-HD extracellular Chro_3076 PF07698 7TM receptor with intracellular HD hydrolase Chro_3077 PF02558 Ketopantoate reductase PanE/ApbA Chro_3077 PF08546 Ketopantoate reductase PanE/ApbA C terminal Chro_3078 PF07885 Ion channel Chro_3078 PF17655 Inward rectifier potassium channel C-terminal domain Chro_3082 PF01370 NAD dependent epimerase/dehydratase family Chro_3083 PF16363 GDP-mannose 4,6 dehydratase Chro_3084 PF02397 Bacterial sugar transferase Chro_3085 PF13439 Glycosyltransferase Family 4 Chro_3085 PF00534 Glycosyl transferases group 1 Chro_3086 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Chro_3087 PF01066 CDP-alcohol phosphatidyltransferase Chro_3088 PF02397 Bacterial sugar transferase Chro_3089 PF00534 Glycosyl transferases group 1 Chro_3089 PF13439 Glycosyltransferase Family 4 Chro_3091 PF01523 Putative modulator of DNA gyrase Chro_3093 PF12833 Helix-turn-helix domain Chro_3093 PF02311 AraC-like ligand binding domain Chro_3094 PF00595 PDZ domain Chro_3094 PF03572 Peptidase family S41 Chro_3095 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Chro_3095 PF17768 RecJ OB domain Chro_3095 PF02272 DHHA1 domain Chro_3095 PF01368 DHH family Chro_3096 PF00486 Transcriptional regulatory protein, C terminal Chro_3096 PF00072 Response regulator receiver domain Chro_3098 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_3100 PF01329 Pterin 4 alpha carbinolamine dehydratase Chro_3103 PF00356 Bacterial regulatory proteins, lacI family Chro_3105 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_3105 PF12804 MobA-like NTP transferase domain Chro_3105 PF03479 Plants and Prokaryotes Conserved (PCC) domain Chro_3110 PF00355 Rieske [2Fe-2S] domain Chro_3112 PF00005 ABC transporter Chro_3115 PF00264 Common central domain of tyrosinase Chro_3116 PF00072 Response regulator receiver domain Chro_3116 PF00486 Transcriptional regulatory protein, C terminal Chro_3117 PF00205 Thiamine pyrophosphate enzyme, central domain Chro_3117 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_3117 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chro_3118 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Chro_3118 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Chro_3125 PF02153 Prephenate dehydrogenase Chro_3125 PF01817 Chorismate mutase type II Chro_3127 PF01761 3-dehydroquinate synthase Chro_3129 PF02798 Glutathione S-transferase, N-terminal domain Chro_3129 PF00043 Glutathione S-transferase, C-terminal domain Chro_3132 PF03275 UDP-galactopyranose mutase Chro_3133 PF17994 Galactofuranosyltransferase 2 N-terminal Chro_3136 PF14524 Wzt C-terminal domain Chro_3136 PF00005 ABC transporter Chro_3140 PF00117 Glutamine amidotransferase class-I Chro_3140 PF00425 chorismate binding enzyme Chro_3140 PF04715 Anthranilate synthase component I, N terminal region Chro_3142 PF00290 Tryptophan synthase alpha chain Chro_3144 PF18152 DAHP synthase ferredoxin-like domain Chro_3144 PF00793 DAHP synthetase I family Chro_3145 PF00591 Glycosyl transferase family, a/b domain Chro_3145 PF02885 Glycosyl transferase family, helical bundle domain Chro_3150 PF01568 Molydopterin dinucleotide binding domain Chro_3150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Chro_3150 PF00384 Molybdopterin oxidoreductase Chro_3153 PF00364 Biotin-requiring enzyme Chro_3153 PF00561 alpha/beta hydrolase fold Chro_3157 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Chro_3158 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Chro_3160 PF03129 Anticodon binding domain Chro_3160 PF09180 Prolyl-tRNA synthetase, C-terminal Chro_3160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Chro_3161 PF02896 PEP-utilising enzyme, TIM barrel domain Chro_3161 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Chro_3161 PF00391 PEP-utilising enzyme, mobile domain Chro_3164 PF17674 HHH domain Chro_3164 PF09371 Tex-like protein N-terminal domain Chro_3164 PF16921 Tex protein YqgF-like domain Chro_3164 PF00575 S1 RNA binding domain Chro_3167 PF00583 Acetyltransferase (GNAT) family Chro_3168 PF00155 Aminotransferase class I and II Chro_3170 PF13614 AAA domain Chro_3171 PF00072 Response regulator receiver domain Chro_3171 PF00196 Bacterial regulatory proteins, luxR family Chro_3172 PF00512 His Kinase A (phospho-acceptor) domain Chro_3172 PF00989 PAS fold Chro_3172 PF00672 HAMP domain Chro_3172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3176 PF02669 K+-transporting ATPase, c chain Chro_3177 PF02702 Osmosensitive K+ channel His kinase sensor domain Chro_3180 PF00437 Type II/IV secretion system protein Chro_3182 PF01435 Peptidase family M48 Chro_3186 PF02350 UDP-N-acetylglucosamine 2-epimerase Chro_3189 PF00437 Type II/IV secretion system protein Chro_3190 PF07689 KaiB domain Chro_3195 PF00596 Class II Aldolase and Adducin N-terminal domain Chro_3199 PF02514 CobN/Magnesium Chelatase Chro_3199 PF11965 Domain of unknown function (DUF3479) Chro_3201 PF01699 Sodium/calcium exchanger protein Chro_3202 PF01699 Sodium/calcium exchanger protein Chro_3203 PF00042 Globin Chro_3203 PF00175 Oxidoreductase NAD-binding domain Chro_3203 PF00970 Oxidoreductase FAD-binding domain Chro_3205 PF02887 Pyruvate kinase, alpha/beta domain Chro_3205 PF00224 Pyruvate kinase, barrel domain Chro_3205 PF00391 PEP-utilising enzyme, mobile domain Chro_3207 PF00753 Metallo-beta-lactamase superfamily Chro_3209 PF01134 Glucose inhibited division protein A Chro_3213 PF07730 Histidine kinase Chro_3214 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Chro_3215 PF12704 MacB-like periplasmic core domain Chro_3215 PF02687 FtsX-like permease family Chro_3215 PF00005 ABC transporter Chro_3216 PF12833 Helix-turn-helix domain Chro_3218 PF03435 Saccharopine dehydrogenase NADP binding domain Chro_3219 PF00069 Protein kinase domain Chro_3219 PF00805 Pentapeptide repeats (8 copies) Chro_3221 PF00106 short chain dehydrogenase Chro_3226 PF00753 Metallo-beta-lactamase superfamily Chro_3230 PF08446 PAS fold Chro_3230 PF00360 Phytochrome region Chro_3230 PF01590 GAF domain Chro_3230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3230 PF00512 His Kinase A (phospho-acceptor) domain Chro_3231 PF00037 4Fe-4S binding domain Chro_3235 PF00223 Photosystem I psaA/psaB protein Chro_3242 PF00990 Diguanylate cyclase, GGDEF domain Chro_3242 PF00072 Response regulator receiver domain Chro_3243 PF01590 GAF domain Chro_3243 PF00563 EAL domain Chro_3243 PF00990 Diguanylate cyclase, GGDEF domain Chro_3243 PF00360 Phytochrome region Chro_3244 PF00486 Transcriptional regulatory protein, C terminal Chro_3244 PF00072 Response regulator receiver domain Chro_3244 PF01627 Hpt domain Chro_3246 PF02195 ParB-like nuclease domain Chro_3249 PF03412 Peptidase C39 family Chro_3249 PF00005 ABC transporter Chro_3249 PF00664 ABC transporter transmembrane region Chro_3264 PF00072 Response regulator receiver domain Chro_3265 PF01627 Hpt domain Chro_3265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3265 PF00512 His Kinase A (phospho-acceptor) domain Chro_3265 PF00072 Response regulator receiver domain Chro_3266 PF13416 Bacterial extracellular solute-binding protein Chro_3270 PF00400 WD domain, G-beta repeat Chro_3274 PF18331 PKHD-type hydroxylase C-terminal domain Chro_3274 PF13640 2OG-Fe(II) oxygenase superfamily Chro_3276 PF00528 Binding-protein-dependent transport system inner membrane component Chro_3277 PF08402 TOBE domain Chro_3277 PF00005 ABC transporter Chro_3279 PF00239 Resolvase, N terminal domain Chro_3279 PF02796 Helix-turn-helix domain of resolvase Chro_3280 PF13700 Domain of unknown function (DUF4158) Chro_3280 PF01526 Tn3 transposase DDE domain Chro_3283 PF00535 Glycosyl transferase family 2 Chro_3285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Chro_3285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Chro_3287 PF03992 Antibiotic biosynthesis monooxygenase Chro_3288 PF00106 short chain dehydrogenase Chro_3290 PF00732 GMC oxidoreductase Chro_3290 PF05199 GMC oxidoreductase Chro_3294 PF00873 AcrB/AcrD/AcrF family Chro_3297 PF01062 Bestrophin, RFP-TM, chloride channel Chro_3298 PF00484 Carbonic anhydrase Chro_3299 PF08865 Domain of unknown function (DUF1830) Chro_3302 PF02311 AraC-like ligand binding domain Chro_3302 PF12833 Helix-turn-helix domain Chro_3306 PF00400 WD domain, G-beta repeat Chro_3306 PF00931 NB-ARC domain Chro_3307 PF00931 NB-ARC domain Chro_3307 PF00400 WD domain, G-beta repeat Chro_3308 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Chro_3308 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Chro_3309 PF13193 AMP-binding enzyme C-terminal domain Chro_3309 PF00501 AMP-binding enzyme Chro_3309 PF16177 Acetyl-coenzyme A synthetase N-terminus Chro_3313 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Chro_3314 PF00512 His Kinase A (phospho-acceptor) domain Chro_3314 PF00672 HAMP domain Chro_3314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3314 PF13426 PAS domain Chro_3315 PF00486 Transcriptional regulatory protein, C terminal Chro_3315 PF00072 Response regulator receiver domain Chro_3315 PF01627 Hpt domain Chro_3317 PF12706 Beta-lactamase superfamily domain Chro_3318 PF03070 TENA/THI-4/PQQC family Chro_3322 PF00149 Calcineurin-like phosphoesterase Chro_3322 PF10518 TAT (twin-arginine translocation) pathway signal sequence Chro_3323 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_3323 PF00403 Heavy-metal-associated domain Chro_3323 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Chro_3326 PF00664 ABC transporter transmembrane region Chro_3326 PF00005 ABC transporter Chro_3326 PF03412 Peptidase C39 family Chro_3331 PF00072 Response regulator receiver domain Chro_3331 PF00486 Transcriptional regulatory protein, C terminal Chro_3333 PF04193 PQ loop repeat Chro_3337 PF00210 Ferritin-like domain Chro_3338 PF04539 Sigma-70 region 3 Chro_3338 PF04542 Sigma-70 region 2 Chro_3338 PF00140 Sigma-70 factor, region 1.2 Chro_3338 PF04545 Sigma-70, region 4 Chro_3340 PF00293 NUDIX domain Chro_3341 PF00512 His Kinase A (phospho-acceptor) domain Chro_3341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3341 PF07689 KaiB domain Chro_3345 PF01915 Glycosyl hydrolase family 3 C-terminal domain Chro_3345 PF00933 Glycosyl hydrolase family 3 N terminal domain Chro_3348 PF00528 Binding-protein-dependent transport system inner membrane component Chro_3349 PF00528 Binding-protein-dependent transport system inner membrane component Chro_3350 PF12911 N-terminal TM domain of oligopeptide transport permease C Chro_3350 PF00528 Binding-protein-dependent transport system inner membrane component Chro_3351 PF00512 His Kinase A (phospho-acceptor) domain Chro_3351 PF08446 PAS fold Chro_3351 PF01590 GAF domain Chro_3351 PF00360 Phytochrome region Chro_3351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3352 PF09308 LuxQ, periplasmic Chro_3352 PF00072 Response regulator receiver domain Chro_3352 PF00512 His Kinase A (phospho-acceptor) domain Chro_3353 PF00814 Glycoprotease family Chro_3355 PF01743 Poly A polymerase head domain Chro_3355 PF12627 Probable RNA and SrmB- binding site of polymerase A Chro_3355 PF13735 tRNA nucleotidyltransferase domain 2 putative Chro_3356 PF01746 tRNA (Guanine-1)-methyltransferase Chro_3359 PF02416 mttA/Hcf106 family Chro_3360 PF00069 Protein kinase domain Chro_3361 PF04545 Sigma-70, region 4 Chro_3361 PF04539 Sigma-70 region 3 Chro_3361 PF04542 Sigma-70 region 2 Chro_3361 PF00140 Sigma-70 factor, region 1.2 Chro_3362 PF00270 DEAD/DEAH box helicase Chro_3362 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Chro_3362 PF00271 Helicase conserved C-terminal domain Chro_3362 PF17764 3′ DNA-binding domain (3′BD) Chro_3362 PF18074 Primosomal protein N C-terminal domain Chro_3365 PF00115 Cytochrome C and Quinol oxidase polypeptide I Chro_3366 PF11808 Phosphate regulon sensor protein PhoR Chro_3366 PF00989 PAS fold Chro_3366 PF00512 His Kinase A (phospho-acceptor) domain Chro_3366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3367 PF01627 Hpt domain Chro_3367 PF00072 Response regulator receiver domain Chro_3367 PF00486 Transcriptional regulatory protein, C terminal Chro_3369 PF00005 ABC transporter Chro_3369 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Chro_3370 PF00436 Single-strand binding protein family Chro_3371 PF00483 Nucleotidyl transferase Chro_3373 PF02571 Precorrin-6x reductase CbiJ/CobK Chro_3380 PF00561 alpha/beta hydrolase fold Chro_3382 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Chro_3385 PF00589 Phage integrase family Chro_3385 PF02899 Phage integrase, N-terminal SAM-like domain Chro_3386 PF00589 Phage integrase family Chro_3386 PF12167 Arm DNA-binding domain Chro_3394 PF00266 Aminotransferase class-V Chro_3399 PF00849 RNA pseudouridylate synthase Chro_3399 PF01479 S4 domain Chro_3401 PF00502 Phycobilisome protein Chro_3402 PF00502 Phycobilisome protein Chro_3403 PF01383 CpcD/allophycocyanin linker domain Chro_3403 PF00427 Phycobilisome Linker polypeptide Chro_3404 PF03130 PBS lyase HEAT-like repeat Chro_3406 PF00502 Phycobilisome protein Chro_3407 PF00502 Phycobilisome protein Chro_3408 PF01383 CpcD/allophycocyanin linker domain Chro_3408 PF00427 Phycobilisome Linker polypeptide Chro_3409 PF01383 CpcD/allophycocyanin linker domain Chro_3410 PF01383 CpcD/allophycocyanin linker domain Chro_3411 PF03130 PBS lyase HEAT-like repeat Chro_3413 PF00427 Phycobilisome Linker polypeptide Chro_3414 PF00427 Phycobilisome Linker polypeptide Chro_3415 PF00427 Phycobilisome Linker polypeptide Chro_3418 PF00829 Ribosomal prokaryotic L21 protein Chro_3419 PF01016 Ribosomal L27 protein Chro_3422 PF02625 XdhC and CoxI family Chro_3422 PF13478 XdhC Rossmann domain Chro_3426 PF00557 Metallopeptidase family M24 Chro_3426 PF05195 Aminopeptidase P, N-terminal domain Chro_3428 PF03958 Bacterial type II/III secretion system short domain Chro_3428 PF00263 Bacterial type II and III secretion system protein Chro_3433 PF02875 Mur ligase family, glutamate ligase domain Chro_3433 PF08245 Mur ligase middle domain Chro_3435 PF01628 HrcA protein C terminal domain Chro_3439 PF05685 Putative restriction endonuclease Chro_3444 PF12849 PBP superfamily domain Chro_3445 PF01590 GAF domain Chro_3445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_3446 PF13419 Haloacid dehalogenase-like hydrolase Chro_3447 PF08331 Domain of unknown function (DUF1730) Chro_3448 PF09150 Orange carotenoid protein, N-terminal Chro_3451 PF00072 Response regulator receiver domain Chro_3451 PF00196 Bacterial regulatory proteins, luxR family Chro_3453 PF00360 Phytochrome region Chro_3453 PF08446 PAS fold Chro_3453 PF00512 His Kinase A (phospho-acceptor) domain Chro_3453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3453 PF01590 GAF domain Chro_3454 PF00486 Transcriptional regulatory protein, C terminal Chro_3454 PF00072 Response regulator receiver domain Chro_3455 PF00072 Response regulator receiver domain Chro_3455 PF09308 LuxQ, periplasmic Chro_3455 PF00512 His Kinase A (phospho-acceptor) domain Chro_3455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3456 PF01339 CheB methylesterase Chro_3457 PF08448 PAS fold Chro_3457 PF03705 CheR methyltransferase, all-alpha domain Chro_3457 PF01739 CheR methyltransferase, SAM binding domain Chro_3457 PF01339 CheB methylesterase Chro_3458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3458 PF00512 His Kinase A (phospho-acceptor) domain Chro_3458 PF00672 HAMP domain Chro_3458 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_3458 PF00072 Response regulator receiver domain Chro_3458 PF01627 Hpt domain Chro_3459 PF01493 GXGXG motif Chro_3459 PF00310 Glutamine amidotransferases class-II Chro_3459 PF04898 Glutamate synthase central domain Chro_3459 PF01645 Conserved region in glutamate synthase Chro_3462 PF02401 LytB protein Chro_3463 PF00486 Transcriptional regulatory protein, C terminal Chro_3463 PF00072 Response regulator receiver domain Chro_3465 PF00004 ATPase family associated with various cellular activities (AAA) Chro_3465 PF17871 AAA lid domain Chro_3465 PF10431 C-terminal, D2-small domain, of ClpB protein Chro_3465 PF02861 Clp amino terminal domain, pathogenicity island component Chro_3465 PF07724 AAA domain (Cdc48 subfamily) Chro_3466 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_3466 PF01590 GAF domain Chro_3467 PF12704 MacB-like periplasmic core domain Chro_3467 PF02687 FtsX-like permease family Chro_3467 PF00005 ABC transporter Chro_3471 PF00398 Ribosomal RNA adenine dimethylase Chro_3472 PF00288 GHMP kinases N terminal domain Chro_3472 PF08544 GHMP kinases C terminal Chro_3475 PF02824 TGS domain Chro_3475 PF04607 Region found in RelA / SpoT proteins Chro_3475 PF13291 ACT domain Chro_3479 PF00528 Binding-protein-dependent transport system inner membrane component Chro_3480 PF04452 RNA methyltransferase Chro_3483 PF12833 Helix-turn-helix domain Chro_3483 PF07883 Cupin domain Chro_3485 PF08240 Alcohol dehydrogenase GroES-like domain Chro_3485 PF00107 Zinc-binding dehydrogenase Chro_3488 PF00459 Inositol monophosphatase family Chro_3489 PF03209 PUCC protein Chro_3490 PF00248 Aldo/keto reductase family Chro_3491 PF00270 DEAD/DEAH box helicase Chro_3491 PF00271 Helicase conserved C-terminal domain Chro_3492 PF00919 Uncharacterized protein family UPF0004 Chro_3492 PF18693 TRAM domain Chro_3492 PF04055 Radical SAM superfamily Chro_3493 PF03437 BtpA family Chro_3494 PF07884 Vitamin K epoxide reductase family Chro_3495 PF03707 Bacterial signalling protein N terminal repeat Chro_3495 PF00563 EAL domain Chro_3495 PF00990 Diguanylate cyclase, GGDEF domain Chro_3497 PF00890 FAD binding domain Chro_3497 PF02910 Fumarate reductase flavoprotein C-term Chro_3501 PF05235 CHAD domain Chro_3501 PF01928 CYTH domain Chro_3508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3508 PF00512 His Kinase A (phospho-acceptor) domain Chro_3510 PF07689 KaiB domain Chro_3511 PF06745 KaiC Chro_3513 PF01593 Flavin containing amine oxidoreductase Chro_3517 PF02653 Branched-chain amino acid transport system / permease component Chro_3519 PF00005 ABC transporter Chro_3519 PF12399 Branched-chain amino acid ATP-binding cassette transporter Chro_3520 PF00005 ABC transporter Chro_3522 PF00535 Glycosyl transferase family 2 Chro_3523 PF01209 ubiE/COQ5 methyltransferase family Chro_3525 PF02706 Chain length determinant protein Chro_3525 PF13614 AAA domain Chro_3525 PF13807 G-rich domain on putative tyrosine kinase Chro_3526 PF00534 Glycosyl transferases group 1 Chro_3526 PF13439 Glycosyltransferase Family 4 Chro_3527 PF13439 Glycosyltransferase Family 4 Chro_3527 PF00534 Glycosyl transferases group 1 Chro_3529 PF01965 DJ-1/PfpI family Chro_3531 PF08495 FIST N domain Chro_3531 PF10442 FIST C domain Chro_3533 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase Chro_3535 PF04483 Protein of unknown function (DUF565) Chro_3544 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Chro_3544 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Chro_3544 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Chro_3544 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Chro_3545 PF00248 Aldo/keto reductase family Chro_3550 PF01165 Ribosomal protein S21 Chro_3551 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Chro_3552 PF00664 ABC transporter transmembrane region Chro_3552 PF00005 ABC transporter Chro_3556 PF04168 A predicted alpha-helical domain with a conserved ER motif. Chro_3556 PF14403 Circularly permuted ATP-grasp type 2 Chro_3557 PF14403 Circularly permuted ATP-grasp type 2 Chro_3559 PF00762 Ferrochelatase Chro_3560 PF01179 Copper amine oxidase, enzyme domain Chro_3560 PF02728 Copper amine oxidase, N3 domain Chro_3562 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Chro_3562 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Chro_3562 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Chro_3562 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Chro_3564 PF01048 Phosphorylase superfamily Chro_3568 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Chro_3568 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Chro_3570 PF00528 Binding-protein-dependent transport system inner membrane component Chro_3571 PF00005 ABC transporter Chro_3572 PF00005 ABC transporter Chro_3573 PF07690 Major Facilitator Superfamily Chro_3574 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Chro_3574 PF00384 Molybdopterin oxidoreductase Chro_3574 PF01568 Molydopterin dinucleotide binding domain Chro_3577 PF02686 Glu-tRNAGln amidotransferase C subunit Chro_3578 PF00474 Sodium:solute symporter family Chro_3579 PF13409 Glutathione S-transferase, N-terminal domain Chro_3580 PF01139 tRNA-splicing ligase RtcB Chro_3582 PF13419 Haloacid dehalogenase-like hydrolase Chro_3583 PF00480 ROK family Chro_3583 PF01325 Iron dependent repressor, N-terminal DNA binding domain Chro_3584 PF13649 Methyltransferase domain Chro_3585 PF13419 Haloacid dehalogenase-like hydrolase Chro_3592 PF00176 SNF2 family N-terminal domain Chro_3592 PF00271 Helicase conserved C-terminal domain Chro_3600 PF01758 Sodium Bile acid symporter family Chro_3604 PF00989 PAS fold Chro_3604 PF16736 Single Cache-like Chro_3604 PF00512 His Kinase A (phospho-acceptor) domain Chro_3604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3605 PF00732 GMC oxidoreductase Chro_3605 PF05199 GMC oxidoreductase Chro_3608 PF00486 Transcriptional regulatory protein, C terminal Chro_3608 PF00072 Response regulator receiver domain Chro_3612 PF00970 Oxidoreductase FAD-binding domain Chro_3612 PF00042 Globin Chro_3612 PF00175 Oxidoreductase NAD-binding domain Chro_3618 PF13545 Crp-like helix-turn-helix domain Chro_3620 PF12852 Cupin Chro_3620 PF12833 Helix-turn-helix domain Chro_3623 PF01497 Periplasmic binding protein Chro_3624 PF12833 Helix-turn-helix domain Chro_3626 PF07715 TonB-dependent Receptor Plug Domain Chro_3626 PF00593 TonB dependent receptor Chro_3627 PF01497 Periplasmic binding protein Chro_3629 PF00664 ABC transporter transmembrane region Chro_3629 PF00005 ABC transporter Chro_3631 PF00593 TonB dependent receptor Chro_3631 PF07715 TonB-dependent Receptor Plug Domain Chro_3632 PF01497 Periplasmic binding protein Chro_3635 PF01032 FecCD transport family Chro_3636 PF01032 FecCD transport family Chro_3637 PF00005 ABC transporter Chro_3639 PF07690 Major Facilitator Superfamily Chro_3640 PF07715 TonB-dependent Receptor Plug Domain Chro_3640 PF00593 TonB dependent receptor Chro_3645 PF00664 ABC transporter transmembrane region Chro_3645 PF00005 ABC transporter Chro_3646 PF00005 ABC transporter Chro_3646 PF00664 ABC transporter transmembrane region Chro_3647 PF04072 Leucine carboxyl methyltransferase Chro_3648 PF00593 TonB dependent receptor Chro_3648 PF07715 TonB-dependent Receptor Plug Domain Chro_3651 PF01648 4'-phosphopantetheinyl transferase superfamily Chro_3652 PF13193 AMP-binding enzyme C-terminal domain Chro_3652 PF00501 AMP-binding enzyme Chro_3653 PF00425 chorismate binding enzyme Chro_3654 PF01648 4'-phosphopantetheinyl transferase superfamily Chro_3655 PF06426 Serine acetyltransferase, N-terminal Chro_3655 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_3656 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Chro_3656 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Chro_3657 PF04820 Tryptophan halogenase Chro_3658 PF00550 Phosphopantetheine attachment site Chro_3658 PF13193 AMP-binding enzyme C-terminal domain Chro_3658 PF00501 AMP-binding enzyme Chro_3658 PF00668 Condensation domain Chro_3659 PF00550 Phosphopantetheine attachment site Chro_3659 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_3659 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_3659 PF16197 Ketoacyl-synthetase C-terminal extension Chro_3659 PF00698 Acyl transferase domain Chro_3659 PF00668 Condensation domain Chro_3660 PF13193 AMP-binding enzyme C-terminal domain Chro_3660 PF00668 Condensation domain Chro_3660 PF13193 AMP-binding enzyme C-terminal domain Chro_3660 PF00501 AMP-binding enzyme Chro_3660 PF00668 Condensation domain Chro_3660 PF00550 Phosphopantetheine attachment site Chro_3660 PF00501 AMP-binding enzyme Chro_3660 PF00550 Phosphopantetheine attachment site Chro_3661 PF00668 Condensation domain Chro_3661 PF08242 Methyltransferase domain Chro_3661 PF00550 Phosphopantetheine attachment site Chro_3661 PF00501 AMP-binding enzyme Chro_3662 PF00550 Phosphopantetheine attachment site Chro_3662 PF00501 AMP-binding enzyme Chro_3662 PF13193 AMP-binding enzyme C-terminal domain Chro_3662 PF00668 Condensation domain Chro_3663 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_3663 PF16197 Ketoacyl-synthetase C-terminal extension Chro_3663 PF00550 Phosphopantetheine attachment site Chro_3663 PF00668 Condensation domain Chro_3663 PF00698 Acyl transferase domain Chro_3663 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_3664 PF00550 Phosphopantetheine attachment site Chro_3664 PF00501 AMP-binding enzyme Chro_3664 PF13193 AMP-binding enzyme C-terminal domain Chro_3664 PF00668 Condensation domain Chro_3667 PF00975 Thioesterase domain Chro_3673 PF08242 Methyltransferase domain Chro_3673 PF00550 Phosphopantetheine attachment site Chro_3673 PF14765 Polyketide synthase dehydratase Chro_3673 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_3673 PF16197 Ketoacyl-synthetase C-terminal extension Chro_3673 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_3673 PF08659 KR domain Chro_3675 PF00593 TonB dependent receptor Chro_3675 PF07715 TonB-dependent Receptor Plug Domain Chro_3676 PF01497 Periplasmic binding protein Chro_3677 PF07690 Major Facilitator Superfamily Chro_3681 PF03781 Sulfatase-modifying factor enzyme 1 Chro_3682 PF00403 Heavy-metal-associated domain Chro_3683 PF04304 Protein of unknown function (DUF454) Chro_3687 PF00403 Heavy-metal-associated domain Chro_3692 PF01699 Sodium/calcium exchanger protein Chro_3695 PF00689 Cation transporting ATPase, C-terminus Chro_3695 PF00690 Cation transporter/ATPase, N-terminus Chro_3697 PF04304 Protein of unknown function (DUF454) Chro_3699 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding Chro_3699 PF01565 FAD binding domain Chro_3701 PF00403 Heavy-metal-associated domain Chro_3704 PF01032 FecCD transport family Chro_3705 PF01032 FecCD transport family Chro_3707 PF01497 Periplasmic binding protein Chro_3713 PF00005 ABC transporter Chro_3713 PF00664 ABC transporter transmembrane region Chro_3714 PF00664 ABC transporter transmembrane region Chro_3714 PF00005 ABC transporter Chro_3717 PF01497 Periplasmic binding protein Chro_3718 PF07715 TonB-dependent Receptor Plug Domain Chro_3718 PF00593 TonB dependent receptor Chro_3719 PF00501 AMP-binding enzyme Chro_3719 PF00550 Phosphopantetheine attachment site Chro_3719 PF07993 Male sterility protein Chro_3719 PF00668 Condensation domain Chro_3719 PF13193 AMP-binding enzyme C-terminal domain Chro_3720 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_3720 PF00550 Phosphopantetheine attachment site Chro_3720 PF00668 Condensation domain Chro_3720 PF16197 Ketoacyl-synthetase C-terminal extension Chro_3720 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_3720 PF00698 Acyl transferase domain Chro_3721 PF00296 Luciferase-like monooxygenase Chro_3722 PF00550 Phosphopantetheine attachment site Chro_3722 PF00668 Condensation domain Chro_3722 PF13193 AMP-binding enzyme C-terminal domain Chro_3722 PF00501 AMP-binding enzyme Chro_3723 PF00550 Phosphopantetheine attachment site Chro_3723 PF00501 AMP-binding enzyme Chro_3723 PF00668 Condensation domain Chro_3723 PF13193 AMP-binding enzyme C-terminal domain Chro_3723 PF07993 Male sterility protein Chro_3724 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Chro_3725 PF00501 AMP-binding enzyme Chro_3725 PF13193 AMP-binding enzyme C-terminal domain Chro_3725 PF00668 Condensation domain Chro_3725 PF00550 Phosphopantetheine attachment site Chro_3726 PF07993 Male sterility protein Chro_3726 PF00501 AMP-binding enzyme Chro_3726 PF13193 AMP-binding enzyme C-terminal domain Chro_3726 PF00668 Condensation domain Chro_3726 PF00550 Phosphopantetheine attachment site Chro_3727 PF00501 AMP-binding enzyme Chro_3727 PF13193 AMP-binding enzyme C-terminal domain Chro_3727 PF00668 Condensation domain Chro_3727 PF00550 Phosphopantetheine attachment site Chro_3728 PF00501 AMP-binding enzyme Chro_3728 PF13193 AMP-binding enzyme C-terminal domain Chro_3728 PF00550 Phosphopantetheine attachment site Chro_3728 PF00668 Condensation domain Chro_3729 PF00550 Phosphopantetheine attachment site Chro_3729 PF00668 Condensation domain Chro_3729 PF13193 AMP-binding enzyme C-terminal domain Chro_3729 PF00501 AMP-binding enzyme Chro_3730 PF13193 AMP-binding enzyme C-terminal domain Chro_3730 PF07993 Male sterility protein Chro_3730 PF00668 Condensation domain Chro_3730 PF00501 AMP-binding enzyme Chro_3730 PF00668 Condensation domain Chro_3730 PF00550 Phosphopantetheine attachment site Chro_3730 PF07993 Male sterility protein Chro_3730 PF13193 AMP-binding enzyme C-terminal domain Chro_3730 PF00550 Phosphopantetheine attachment site Chro_3730 PF00501 AMP-binding enzyme Chro_3731 PF00550 Phosphopantetheine attachment site Chro_3731 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_3731 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_3731 PF16197 Ketoacyl-synthetase C-terminal extension Chro_3731 PF00668 Condensation domain Chro_3731 PF13193 AMP-binding enzyme C-terminal domain Chro_3731 PF00501 AMP-binding enzyme Chro_3731 PF00202 Aminotransferase class-III Chro_3733 PF03621 MbtH-like protein Chro_3734 PF01804 Penicillin amidase Chro_3737 PF00589 Phage integrase family Chro_3737 PF02899 Phage integrase, N-terminal SAM-like domain Chro_3748 PF00664 ABC transporter transmembrane region Chro_3748 PF00005 ABC transporter Chro_3748 PF03412 Peptidase C39 family Chro_3753 PF13145 PPIC-type PPIASE domain Chro_3768 PF00271 Helicase conserved C-terminal domain Chro_3768 PF08463 EcoEI R protein C-terminal Chro_3768 PF04851 Type III restriction enzyme, res subunit Chro_3768 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Chro_3769 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Chro_3770 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Chro_3771 PF02384 N-6 DNA Methylase Chro_3775 PF01934 Protein of unknown function DUF86 Chro_3776 PF01420 Type I restriction modification DNA specificity domain Chro_3782 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Chro_3782 PF03129 Anticodon binding domain Chro_3782 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Chro_3787 PF08865 Domain of unknown function (DUF1830) Chro_3788 PF02657 Fe-S metabolism associated domain Chro_3789 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_3789 PF07683 Cobalamin synthesis protein cobW C-terminal domain Chro_3790 PF01227 GTP cyclohydrolase I Chro_3791 PF07683 Cobalamin synthesis protein cobW C-terminal domain Chro_3791 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_3804 PF02899 Phage integrase, N-terminal SAM-like domain Chro_3804 PF00589 Phage integrase family Chro_3813 PF00271 Helicase conserved C-terminal domain Chro_3813 PF00176 SNF2 family N-terminal domain Chro_3821 PF06724 Domain of Unknown Function (DUF1206) Chro_3824 PF00144 Beta-lactamase Chro_3826 PF01594 AI-2E family transporter Chro_3827 PF05239 PRC-barrel domain Chro_3827 PF09557 Domain of unknown function (DUF2382) Chro_3830 PF02469 Fasciclin domain Chro_3832 PF01627 Hpt domain Chro_3832 PF00072 Response regulator receiver domain Chro_3832 PF00486 Transcriptional regulatory protein, C terminal Chro_3833 PF00512 His Kinase A (phospho-acceptor) domain Chro_3833 PF01627 Hpt domain Chro_3833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_3833 PF00989 PAS fold Chro_3833 PF00072 Response regulator receiver domain Chro_3833 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_3835 PF00072 Response regulator receiver domain Chro_3835 PF00486 Transcriptional regulatory protein, C terminal Chro_3836 PF13180 PDZ domain Chro_3838 PF05239 PRC-barrel domain Chro_3838 PF09557 Domain of unknown function (DUF2382) Chro_3843 PF01435 Peptidase family M48 Chro_3843 PF13181 Tetratricopeptide repeat Chro_3845 PF00999 Sodium/hydrogen exchanger family Chro_3845 PF03471 Transporter associated domain Chro_3849 PF00149 Calcineurin-like phosphoesterase Chro_3849 PF10518 TAT (twin-arginine translocation) pathway signal sequence Chro_3855 PF16338 Domain of unknown function (DUF4968) Chro_3855 PF17137 Domain of unknown function (DUF5110) Chro_3855 PF13802 Galactose mutarotase-like Chro_3855 PF01055 Glycosyl hydrolases family 31 Chro_3857 PF07885 Ion channel Chro_3861 PF05552 Conserved TM helix Chro_3861 PF00924 Mechanosensitive ion channel Chro_3862 PF10011 Predicted membrane protein (DUF2254) Chro_3869 PF01170 Putative RNA methylase family UPF0020 Chro_3869 PF02926 THUMP domain Chro_3873 PF00067 Cytochrome P450 Chro_3881 PF16193 AAA C-terminal domain Chro_3881 PF12002 MgsA AAA+ ATPase C terminal Chro_3881 PF00004 ATPase family associated with various cellular activities (AAA) Chro_3885 PF01565 FAD binding domain Chro_3885 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding Chro_3890 PF02190 ATP-dependent protease La (LON) substrate-binding domain Chro_3890 PF05362 Lon protease (S16) C-terminal proteolytic domain Chro_3890 PF00004 ATPase family associated with various cellular activities (AAA) Chro_3899 PF09115 DNA polymerase III, delta subunit, C terminal Chro_3901 PF01850 PIN domain Chro_3902 PF00436 Single-strand binding protein family Chro_3905 PF00034 Cytochrome c Chro_3905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Chro_3906 PF00561 alpha/beta hydrolase fold Chro_3908 PF01042 Endoribonuclease L-PSP Chro_3912 PF05199 GMC oxidoreductase Chro_3912 PF00732 GMC oxidoreductase Chro_3915 PF00106 short chain dehydrogenase Chro_3917 PF14765 Polyketide synthase dehydratase Chro_3917 PF00550 Phosphopantetheine attachment site Chro_3917 PF08659 KR domain Chro_3917 PF16197 Ketoacyl-synthetase C-terminal extension Chro_3917 PF00109 Beta-ketoacyl synthase, N-terminal domain Chro_3917 PF08240 Alcohol dehydrogenase GroES-like domain Chro_3917 PF00698 Acyl transferase domain Chro_3917 PF02801 Beta-ketoacyl synthase, C-terminal domain Chro_3918 PF01638 HxlR-like helix-turn-helix Chro_3921 PF00072 Response regulator receiver domain Chro_3921 PF00196 Bacterial regulatory proteins, luxR family Chro_3922 PF00069 Protein kinase domain Chro_3922 PF03793 PASTA domain Chro_3925 PF00106 short chain dehydrogenase Chro_3927 PF06719 AraC-type transcriptional regulator N-terminus Chro_3927 PF12833 Helix-turn-helix domain Chro_3942 PF03793 PASTA domain Chro_3942 PF00069 Protein kinase domain Chro_3954 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Chro_3954 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Chro_3955 PF01726 LexA DNA binding domain Chro_3955 PF00717 Peptidase S24-like Chro_3957 PF00271 Helicase conserved C-terminal domain Chro_3957 PF04851 Type III restriction enzyme, res subunit Chro_3957 PF17757 UvrB interaction domain Chro_3957 PF02151 UvrB/uvrC motif Chro_3957 PF12344 Ultra-violet resistance protein B Chro_3958 PF12697 Alpha/beta hydrolase family Chro_3959 PF00072 Response regulator receiver domain Chro_3959 PF00486 Transcriptional regulatory protein, C terminal Chro_3960 PF01494 FAD binding domain Chro_3963 PF01022 Bacterial regulatory protein, arsR family Chro_3964 PF00364 Biotin-requiring enzyme Chro_3965 PF08207 Elongation factor P (EF-P) KOW-like domain Chro_3965 PF01132 Elongation factor P (EF-P) OB domain Chro_3965 PF09285 Elongation factor P, C-terminal Chro_3967 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Chro_3970 PF13180 PDZ domain Chro_3971 PF01551 Peptidase family M23 Chro_3971 PF01464 Transglycosylase SLT domain Chro_3971 PF10145 Phage-related minor tail protein Chro_3973 PF01761 3-dehydroquinate synthase Chro_3977 PF00999 Sodium/hydrogen exchanger family Chro_3977 PF00582 Universal stress protein family Chro_3978 PF16363 GDP-mannose 4,6 dehydratase Chro_3979 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Chro_3979 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Chro_3979 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Chro_3981 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Chro_3985 PF17863 AAA lid domain Chro_3985 PF07726 ATPase family associated with various cellular activities (AAA) Chro_3995 PF00805 Pentapeptide repeats (8 copies) Chro_3995 PF00069 Protein kinase domain Chro_3998 PF00581 Rhodanese-like domain Chro_3999 PF01126 Heme oxygenase Chro_4000 PF02586 SOS response associated peptidase (SRAP) Chro_4001 PF13417 Glutathione S-transferase, N-terminal domain Chro_4002 PF00395 S-layer homology domain Chro_4002 PF04966 Carbohydrate-selective porin, OprB family Chro_4003 PF13180 PDZ domain Chro_4004 PF13180 PDZ domain Chro_4006 PF00069 Protein kinase domain Chro_4008 PF00069 Protein kinase domain Chro_4009 PF01061 ABC-2 type transporter Chro_4009 PF00005 ABC transporter Chro_4009 PF00498 FHA domain Chro_4014 PF03441 FAD binding domain of DNA photolyase Chro_4014 PF00875 DNA photolyase Chro_4015 PF02844 Phosphoribosylglycinamide synthetase, N domain Chro_4015 PF02843 Phosphoribosylglycinamide synthetase, C domain Chro_4015 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Chro_4016 PF00512 His Kinase A (phospho-acceptor) domain Chro_4016 PF00989 PAS fold Chro_4016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4016 PF00672 HAMP domain Chro_4017 PF00583 Acetyltransferase (GNAT) family Chro_4020 PF00291 Pyridoxal-phosphate dependent enzyme Chro_4024 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Chro_4025 PF00772 DnaB-like helicase N terminal domain Chro_4025 PF03796 DnaB-like helicase C terminal domain Chro_4025 PF14528 LAGLIDADG-like domain Chro_4025 PF00772 DnaB-like helicase N terminal domain Chro_4025 PF03796 DnaB-like helicase C terminal domain Chro_4025 PF14528 LAGLIDADG-like domain Chro_4026 PF03948 Ribosomal protein L9, C-terminal domain Chro_4026 PF01281 Ribosomal protein L9, N-terminal domain Chro_4027 PF00124 Photosynthetic reaction centre protein Chro_4028 PF01230 HIT domain Chro_4029 PF01078 Magnesium chelatase, subunit ChlI Chro_4029 PF13335 Magnesium chelatase, subunit ChlI C-terminal Chro_4030 PF17768 RecJ OB domain Chro_4030 PF02272 DHHA1 domain Chro_4030 PF01368 DHH family Chro_4030 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Chro_4033 PF04760 Translation initiation factor IF-2, N-terminal region Chro_4033 PF08364 Bacterial translation initiation factor IF-2 associated region Chro_4033 PF11987 Translation-initiation factor 2 Chro_4033 PF00009 Elongation factor Tu GTP binding domain Chro_4034 PF01740 STAS domain Chro_4036 PF00636 Ribonuclease III domain Chro_4037 PF00588 SpoU rRNA Methylase family Chro_4037 PF08032 RNA 2'-O ribose methyltransferase substrate binding Chro_4039 PF08486 Stage II sporulation protein Chro_4042 PF13439 Glycosyltransferase Family 4 Chro_4042 PF00534 Glycosyl transferases group 1 Chro_4043 PF00578 AhpC/TSA family Chro_4046 PF13732 Domain of unknown function (DUF4162) Chro_4046 PF00005 ABC transporter Chro_4049 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Chro_4049 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Chro_4050 PF00115 Cytochrome C and Quinol oxidase polypeptide I Chro_4051 PF00510 Cytochrome c oxidase subunit III Chro_4052 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Chro_4052 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_4053 PF00155 Aminotransferase class I and II Chro_4054 PF00216 Bacterial DNA-binding protein Chro_4060 PF00005 ABC transporter Chro_4061 PF01872 RibD C-terminal domain Chro_4061 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Chro_4064 PF04085 rod shape-determining protein MreC Chro_4066 PF00436 Single-strand binding protein family Chro_4069 PF00690 Cation transporter/ATPase, N-terminus Chro_4069 PF00689 Cation transporting ATPase, C-terminus Chro_4070 PF02463 RecF/RecN/SMC N terminal domain Chro_4071 PF02308 MgtC family Chro_4077 PF01380 SIS domain Chro_4080 PF00350 Dynamin family Chro_4084 PF00425 chorismate binding enzyme Chro_4086 PF01040 UbiA prenyltransferase family Chro_4088 PF00501 AMP-binding enzyme Chro_4088 PF13193 AMP-binding enzyme C-terminal domain Chro_4091 PF00355 Rieske [2Fe-2S] domain Chro_4092 PF00355 Rieske [2Fe-2S] domain Chro_4093 PF00291 Pyridoxal-phosphate dependent enzyme Chro_4095 PF00990 Diguanylate cyclase, GGDEF domain Chro_4095 PF00563 EAL domain Chro_4095 PF03707 Bacterial signalling protein N terminal repeat Chro_4096 PF07690 Major Facilitator Superfamily Chro_4100 PF00005 ABC transporter Chro_4101 PF07690 Major Facilitator Superfamily Chro_4102 PF03707 Bacterial signalling protein N terminal repeat Chro_4102 PF00563 EAL domain Chro_4102 PF00990 Diguanylate cyclase, GGDEF domain Chro_4104 PF07516 SecA Wing and Scaffold domain Chro_4104 PF01043 SecA preprotein cross-linking domain Chro_4104 PF07517 SecA DEAD-like domain Chro_4108 PF00085 Thioredoxin Chro_4111 PF00440 Bacterial regulatory proteins, tetR family Chro_4112 PF00035 Double-stranded RNA binding motif Chro_4112 PF00636 Ribonuclease III domain Chro_4113 PF00561 alpha/beta hydrolase fold Chro_4115 PF00756 Putative esterase Chro_4116 PF00202 Aminotransferase class-III Chro_4117 PF01595 Cyclin M transmembrane N-terminal domain Chro_4117 PF00571 CBS domain Chro_4118 PF00171 Aldehyde dehydrogenase family Chro_4125 PF00032 Cytochrome b(C-terminal)/b6/petD Chro_4126 PF00033 Cytochrome b/b6/petB Chro_4127 PF03572 Peptidase family S41 Chro_4127 PF00595 PDZ domain Chro_4128 PF11016 Protein of unknown function (DUF2854) Chro_4130 PF00005 ABC transporter Chro_4133 PF01743 Poly A polymerase head domain Chro_4133 PF12627 Probable RNA and SrmB- binding site of polymerase A Chro_4133 PF13735 tRNA nucleotidyltransferase domain 2 putative Chro_4134 PF01737 YCF9 Chro_4138 PF00171 Aldehyde dehydrogenase family Chro_4140 PF06838 Methionine gamma-lyase Chro_4143 PF01555 DNA methylase Chro_4145 PF00691 OmpA family Chro_4145 PF01389 OmpA-like transmembrane domain Chro_4146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4146 PF00512 His Kinase A (phospho-acceptor) domain Chro_4146 PF00072 Response regulator receiver domain Chro_4146 PF09308 LuxQ, periplasmic Chro_4151 PF00392 Bacterial regulatory proteins, gntR family Chro_4151 PF00155 Aminotransferase class I and II Chro_4156 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Chro_4156 PF00953 Glycosyl transferase family 4 Chro_4158 PF00994 Probable molybdopterin binding domain Chro_4160 PF17820 PDZ domain Chro_4160 PF13180 PDZ domain Chro_4161 PF13180 PDZ domain Chro_4163 PF00069 Protein kinase domain Chro_4164 PF01008 Initiation factor 2 subunit family Chro_4168 PF02654 Cobalamin-5-phosphate synthase Chro_4170 PF01434 Peptidase family M41 Chro_4170 PF00004 ATPase family associated with various cellular activities (AAA) Chro_4170 PF17862 AAA+ lid domain Chro_4170 PF06480 FtsH Extracellular Chro_4171 PF00892 EamA-like transporter family Chro_4174 PF00474 Sodium:solute symporter family Chro_4179 PF00682 HMGL-like Chro_4179 PF08502 LeuA allosteric (dimerisation) domain Chro_4183 PF00920 Dehydratase family Chro_4184 PF00691 OmpA family Chro_4186 PF00528 Binding-protein-dependent transport system inner membrane component Chro_4187 PF00474 Sodium:solute symporter family Chro_4188 PF04966 Carbohydrate-selective porin, OprB family Chro_4190 PF01565 FAD binding domain Chro_4190 PF02913 FAD linked oxidases, C-terminal domain Chro_4192 PF02463 RecF/RecN/SMC N terminal domain Chro_4192 PF06470 SMC proteins Flexible Hinge Domain Chro_4194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4194 PF00672 HAMP domain Chro_4194 PF18698 Histidine kinase sensor domain Chro_4194 PF00989 PAS fold Chro_4194 PF00512 His Kinase A (phospho-acceptor) domain Chro_4198 PF01062 Bestrophin, RFP-TM, chloride channel Chro_4199 PF00486 Transcriptional regulatory protein, C terminal Chro_4199 PF00072 Response regulator receiver domain Chro_4199 PF01627 Hpt domain Chro_4200 PF14332 Domain of unknown function (DUF4388) Chro_4200 PF00072 Response regulator receiver domain Chro_4202 PF00072 Response regulator receiver domain Chro_4202 PF00486 Transcriptional regulatory protein, C terminal Chro_4204 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_4204 PF01590 GAF domain Chro_4208 PF00672 HAMP domain Chro_4208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4208 PF00512 His Kinase A (phospho-acceptor) domain Chro_4208 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_4208 PF01627 Hpt domain Chro_4208 PF00072 Response regulator receiver domain Chro_4210 PF04461 Protein of unknown function (DUF520) Chro_4213 PF03551 Transcriptional regulator PadR-like family Chro_4213 PF10400 Virulence activator alpha C-term Chro_4215 PF07085 DRTGG domain Chro_4217 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Chro_4217 PF03725 3' exoribonuclease family, domain 2 Chro_4217 PF00575 S1 RNA binding domain Chro_4217 PF00013 KH domain Chro_4217 PF01138 3' exoribonuclease family, domain 1 Chro_4218 PF00563 EAL domain Chro_4218 PF08448 PAS fold Chro_4218 PF08447 PAS fold Chro_4218 PF00990 Diguanylate cyclase, GGDEF domain Chro_4219 PF04752 ChaC-like protein Chro_4220 PF13302 Acetyltransferase (GNAT) domain Chro_4221 PF16363 GDP-mannose 4,6 dehydratase Chro_4222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4222 PF09308 LuxQ, periplasmic Chro_4222 PF00512 His Kinase A (phospho-acceptor) domain Chro_4222 PF00072 Response regulator receiver domain Chro_4224 PF00805 Pentapeptide repeats (8 copies) Chro_4224 PF00069 Protein kinase domain Chro_4225 PF03483 B3/4 domain Chro_4225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Chro_4225 PF03484 tRNA synthetase B5 domain Chro_4225 PF03147 Ferredoxin-fold anticodon binding domain Chro_4225 PF01588 Putative tRNA binding domain Chro_4226 PF01979 Amidohydrolase family Chro_4227 PF00005 ABC transporter Chro_4229 PF00072 Response regulator receiver domain Chro_4229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4230 PF00360 Phytochrome region Chro_4230 PF00990 Diguanylate cyclase, GGDEF domain Chro_4230 PF00563 EAL domain Chro_4230 PF01590 GAF domain Chro_4234 PF01702 Queuine tRNA-ribosyltransferase Chro_4236 PF01042 Endoribonuclease L-PSP Chro_4238 PF00582 Universal stress protein family Chro_4243 PF00141 Peroxidase Chro_4246 PF00690 Cation transporter/ATPase, N-terminus Chro_4246 PF00689 Cation transporting ATPase, C-terminus Chro_4247 PF01569 PAP2 superfamily Chro_4250 PF13091 PLD-like domain Chro_4250 PF13396 Phospholipase_D-nuclease N-terminal Chro_4253 PF02469 Fasciclin domain Chro_4255 PF13520 Amino acid permease Chro_4258 PF00571 CBS domain Chro_4258 PF03448 MgtE intracellular N domain Chro_4258 PF01769 Divalent cation transporter Chro_4259 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Chro_4262 PF00486 Transcriptional regulatory protein, C terminal Chro_4262 PF00072 Response regulator receiver domain Chro_4263 PF01627 Hpt domain Chro_4263 PF00072 Response regulator receiver domain Chro_4263 PF00486 Transcriptional regulatory protein, C terminal Chro_4264 PF00672 HAMP domain Chro_4264 PF13426 PAS domain Chro_4264 PF00512 His Kinase A (phospho-acceptor) domain Chro_4264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4265 PF00072 Response regulator receiver domain Chro_4265 PF00486 Transcriptional regulatory protein, C terminal Chro_4270 PF00175 Oxidoreductase NAD-binding domain Chro_4270 PF00042 Globin Chro_4270 PF00970 Oxidoreductase FAD-binding domain Chro_4271 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Chro_4271 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Chro_4272 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Chro_4276 PF06055 Exopolysaccharide synthesis, ExoD Chro_4281 PF09335 SNARE associated Golgi protein Chro_4282 PF00188 Cysteine-rich secretory protein family Chro_4286 PF01594 AI-2E family transporter Chro_4287 PF00999 Sodium/hydrogen exchanger family Chro_4289 PF01435 Peptidase family M48 Chro_4292 PF00326 Prolyl oligopeptidase family Chro_4297 PF00231 ATP synthase Chro_4298 PF02874 ATP synthase alpha/beta family, beta-barrel domain Chro_4298 PF00306 ATP synthase alpha/beta chain, C terminal domain Chro_4298 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Chro_4299 PF00213 ATP synthase delta (OSCP) subunit Chro_4300 PF00430 ATP synthase B/B' CF(0) Chro_4302 PF00137 ATP synthase subunit C Chro_4303 PF00119 ATP synthase A chain Chro_4304 PF12966 N-ATPase, AtpR subunit Chro_4305 PF13847 Methyltransferase domain Chro_4319 PF00502 Phycobilisome protein Chro_4319 PF00427 Phycobilisome Linker polypeptide Chro_4320 PF00502 Phycobilisome protein Chro_4321 PF00502 Phycobilisome protein Chro_4322 PF01383 CpcD/allophycocyanin linker domain Chro_4323 PF01098 Cell cycle protein Chro_4328 PF14489 QueF-like protein Chro_4335 PF00124 Photosynthetic reaction centre protein Chro_4337 PF16360 GTP-binding GTPase Middle Region Chro_4337 PF13167 GTP-binding GTPase N-terminal Chro_4337 PF01926 50S ribosome-binding GTPase Chro_4341 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Chro_4342 PF12773 Double zinc ribbon Chro_4342 PF00498 FHA domain Chro_4344 PF01192 RNA polymerase Rpb6 Chro_4346 PF12804 MobA-like NTP transferase domain Chro_4347 PF00563 EAL domain Chro_4347 PF00990 Diguanylate cyclase, GGDEF domain Chro_4347 PF08448 PAS fold Chro_4349 PF17284 Spermidine synthase tetramerisation domain Chro_4350 PF02675 S-adenosylmethionine decarboxylase Chro_4351 PF01593 Flavin containing amine oxidoreductase Chro_4352 PF00893 Small Multidrug Resistance protein Chro_4353 PF05532 CsbD-like Chro_4354 PF01207 Dihydrouridine synthase (Dus) Chro_4355 PF00421 Photosystem II protein Chro_4356 PF00502 Phycobilisome protein Chro_4357 PF00502 Phycobilisome protein Chro_4359 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Chro_4361 PF00749 tRNA synthetases class I (E and Q), catalytic domain Chro_4362 PF00248 Aldo/keto reductase family Chro_4364 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Chro_4364 PF01926 50S ribosome-binding GTPase Chro_4371 PF00106 short chain dehydrogenase Chro_4372 PF01817 Chorismate mutase type II Chro_4372 PF01842 ACT domain Chro_4372 PF00800 Prephenate dehydratase Chro_4374 PF01351 Ribonuclease HII Chro_4375 PF10150 Ribonuclease E/G family Chro_4380 PF02617 ATP-dependent Clp protease adaptor protein ClpS Chro_4383 PF00535 Glycosyl transferase family 2 Chro_4384 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_4386 PF01966 HD domain Chro_4386 PF00672 HAMP domain Chro_4388 PF08865 Domain of unknown function (DUF1830) Chro_4390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Chro_4390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Chro_4392 PF03091 CutA1 divalent ion tolerance protein Chro_4393 PF00730 HhH-GPD superfamily base excision DNA repair protein Chro_4393 PF00633 Helix-hairpin-helix motif Chro_4393 PF10576 Iron-sulfur binding domain of endonuclease III Chro_4395 PF01467 Cytidylyltransferase-like Chro_4397 PF01594 AI-2E family transporter Chro_4400 PF01926 50S ribosome-binding GTPase Chro_4400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Chro_4403 PF00708 Acylphosphatase Chro_4403 PF07503 HypF finger Chro_4403 PF17788 HypF Kae1-like domain Chro_4403 PF01300 Telomere recombination Chro_4404 PF01455 HupF/HypC family Chro_4406 PF01180 Dihydroorotate dehydrogenase Chro_4407 PF00365 Phosphofructokinase Chro_4408 PF01924 Hydrogenase formation hypA family Chro_4409 PF00586 AIR synthase related protein, N-terminal domain Chro_4409 PF02769 AIR synthase related protein, C-terminal domain Chro_4412 PF00486 Transcriptional regulatory protein, C terminal Chro_4412 PF00072 Response regulator receiver domain Chro_4413 PF06745 KaiC Chro_4413 PF18073 Rubredoxin metal binding domain Chro_4415 PF13439 Glycosyltransferase Family 4 Chro_4415 PF00534 Glycosyl transferases group 1 Chro_4419 PF17862 AAA+ lid domain Chro_4419 PF00004 ATPase family associated with various cellular activities (AAA) Chro_4419 PF01434 Peptidase family M41 Chro_4427 PF00202 Aminotransferase class-III Chro_4433 PF00069 Protein kinase domain Chro_4435 PF00891 O-methyltransferase domain Chro_4440 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_4440 PF07683 Cobalamin synthesis protein cobW C-terminal domain Chro_4444 PF00069 Protein kinase domain Chro_4444 PF00805 Pentapeptide repeats (8 copies) Chro_4446 PF00528 Binding-protein-dependent transport system inner membrane component Chro_4447 PF00005 ABC transporter Chro_4448 PF00375 Sodium:dicarboxylate symporter family Chro_4449 PF00873 AcrB/AcrD/AcrF family Chro_4451 PF01625 Peptide methionine sulfoxide reductase Chro_4455 PF03109 ABC1 family Chro_4457 PF01050 Mannose-6-phosphate isomerase Chro_4457 PF00483 Nucleotidyl transferase Chro_4458 PF03816 Cell envelope-related transcriptional attenuator domain Chro_4459 PF00072 Response regulator receiver domain Chro_4459 PF00989 PAS fold Chro_4459 PF01627 Hpt domain Chro_4459 PF00512 His Kinase A (phospho-acceptor) domain Chro_4459 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_4459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4460 PF08446 PAS fold Chro_4460 PF00512 His Kinase A (phospho-acceptor) domain Chro_4460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4460 PF00360 Phytochrome region Chro_4460 PF01590 GAF domain Chro_4461 PF00925 GTP cyclohydrolase II Chro_4461 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Chro_4464 PF00873 AcrB/AcrD/AcrF family Chro_4465 PF05193 Peptidase M16 inactive domain Chro_4465 PF00675 Insulinase (Peptidase family M16) Chro_4466 PF00557 Metallopeptidase family M24 Chro_4469 PF00202 Aminotransferase class-III Chro_4470 PF00282 Pyridoxal-dependent decarboxylase conserved domain Chro_4471 PF01571 Aminomethyltransferase folate-binding domain Chro_4471 PF08669 Glycine cleavage T-protein C-terminal barrel domain Chro_4474 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_4475 PF06298 Photosystem II protein Y (PsbY) Chro_4477 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Chro_4479 PF00578 AhpC/TSA family Chro_4479 PF10417 C-terminal domain of 1-Cys peroxiredoxin Chro_4480 PF00958 GMP synthase C terminal domain Chro_4480 PF00117 Glutamine amidotransferase class-I Chro_4480 PF13302 Acetyltransferase (GNAT) domain Chro_4480 PF03352 Methyladenine glycosylase Chro_4480 PF13673 Acetyltransferase (GNAT) domain Chro_4481 PF00037 4Fe-4S binding domain Chro_4482 PF00005 ABC transporter Chro_4484 PF02690 Na+/Pi-cotransporter Chro_4485 PF12849 PBP superfamily domain Chro_4486 PF13419 Haloacid dehalogenase-like hydrolase Chro_4487 PF12697 Alpha/beta hydrolase family Chro_4488 PF03816 Cell envelope-related transcriptional attenuator domain Chro_4490 PF01594 AI-2E family transporter Chro_4492 PF06426 Serine acetyltransferase, N-terminal Chro_4492 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_4494 PF01327 Polypeptide deformylase Chro_4502 PF00694 Aconitase C-terminal domain Chro_4505 PF01627 Hpt domain Chro_4505 PF00512 His Kinase A (phospho-acceptor) domain Chro_4505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4505 PF00072 Response regulator receiver domain Chro_4505 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_4512 PF00004 ATPase family associated with various cellular activities (AAA) Chro_4512 PF17862 AAA+ lid domain Chro_4512 PF01434 Peptidase family M41 Chro_4512 PF06480 FtsH Extracellular Chro_4514 PF01048 Phosphorylase superfamily Chro_4518 PF01641 SelR domain Chro_4519 PF00005 ABC transporter Chro_4524 PF00148 Nitrogenase component 1 type Oxidoreductase Chro_4527 PF03819 MazG nucleotide pyrophosphohydrolase domain Chro_4531 PF02325 YGGT family Chro_4534 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Chro_4534 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Chro_4538 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chro_4538 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_4538 PF00205 Thiamine pyrophosphate enzyme, central domain Chro_4542 PF00732 GMC oxidoreductase Chro_4542 PF05199 GMC oxidoreductase Chro_4545 PF00128 Alpha amylase, catalytic domain Chro_4545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Chro_4547 PF02931 Neurotransmitter-gated ion-channel ligand binding domain Chro_4548 PF00350 Dynamin family Chro_4549 PF01048 Phosphorylase superfamily Chro_4551 PF01728 FtsJ-like methyltransferase Chro_4551 PF01479 S4 domain Chro_4552 PF00459 Inositol monophosphatase family Chro_4553 PF00384 Molybdopterin oxidoreductase Chro_4557 PF00936 BMC domain Chro_4561 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Chro_4561 PF01276 Orn/Lys/Arg decarboxylase, major domain Chro_4562 PF16736 Single Cache-like Chro_4562 PF00989 PAS fold Chro_4562 PF00512 His Kinase A (phospho-acceptor) domain Chro_4562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4563 PF07568 Histidine kinase Chro_4563 PF12282 Signal transduction histidine kinase Chro_4563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4566 PF04151 Bacterial pre-peptidase C-terminal domain Chro_4566 PF00082 Subtilase family Chro_4567 PF12838 4Fe-4S dicluster domain Chro_4570 PF03459 TOBE domain Chro_4578 PF05082 Rop-like Chro_4579 PF03270 Protein of unknown function, DUF269 Chro_4580 PF02579 Dinitrogenase iron-molybdenum cofactor Chro_4581 PF00148 Nitrogenase component 1 type Oxidoreductase Chro_4584 PF00148 Nitrogenase component 1 type Oxidoreductase Chro_4586 PF01592 NifU-like N terminal domain Chro_4586 PF04324 BFD-like [2Fe-2S] binding domain Chro_4586 PF01106 NifU-like domain Chro_4589 PF02579 Dinitrogenase iron-molybdenum cofactor Chro_4589 PF04055 Radical SAM superfamily Chro_4590 PF06426 Serine acetyltransferase, N-terminal Chro_4590 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_4592 PF00210 Ferritin-like domain Chro_4594 PF00682 HMGL-like Chro_4595 PF04319 NifZ domain Chro_4599 PF04472 Cell division protein SepF Chro_4602 PF00400 WD domain, G-beta repeat Chro_4602 PF00931 NB-ARC domain Chro_4603 PF17843 MycE methyltransferase N-terminal Chro_4609 PF00535 Glycosyl transferase family 2 Chro_4610 PF01266 FAD dependent oxidoreductase Chro_4611 PF00535 Glycosyl transferase family 2 Chro_4612 PF13439 Glycosyltransferase Family 4 Chro_4614 PF00005 ABC transporter Chro_4620 PF00534 Glycosyl transferases group 1 Chro_4620 PF13439 Glycosyltransferase Family 4 Chro_4621 PF00534 Glycosyl transferases group 1 Chro_4625 PF00005 ABC transporter Chro_4626 PF08003 Protein of unknown function (DUF1698) Chro_4629 PF00534 Glycosyl transferases group 1 Chro_4629 PF13439 Glycosyltransferase Family 4 Chro_4632 PF14307 Glycosyltransferase WbsX Chro_4632 PF05045 Rhamnan synthesis protein F Chro_4633 PF00535 Glycosyl transferase family 2 Chro_4635 PF16363 GDP-mannose 4,6 dehydratase Chro_4636 PF16363 GDP-mannose 4,6 dehydratase Chro_4637 PF13614 AAA domain Chro_4639 PF03062 MBOAT, membrane-bound O-acyltransferase family Chro_4642 PF00483 Nucleotidyl transferase Chro_4643 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Chro_4644 PF04321 RmlD substrate binding domain Chro_4645 PF00535 Glycosyl transferase family 2 Chro_4650 PF13520 Amino acid permease Chro_4652 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Chro_4654 PF03912 Psb28 protein Chro_4655 PF08338 Domain of unknown function (DUF1731) Chro_4655 PF01370 NAD dependent epimerase/dehydratase family Chro_4657 PF00528 Binding-protein-dependent transport system inner membrane component Chro_4659 PF02469 Fasciclin domain Chro_4660 PF01645 Conserved region in glutamate synthase Chro_4663 PF00120 Glutamine synthetase, catalytic domain Chro_4665 PF01571 Aminomethyltransferase folate-binding domain Chro_4665 PF08669 Glycine cleavage T-protein C-terminal barrel domain Chro_4665 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_4665 PF17806 Sarcosine oxidase A3 domain Chro_4667 PF01266 FAD dependent oxidoreductase Chro_4669 PF10431 C-terminal, D2-small domain, of ClpB protein Chro_4669 PF07724 AAA domain (Cdc48 subfamily) Chro_4669 PF02861 Clp amino terminal domain, pathogenicity island component Chro_4669 PF00004 ATPase family associated with various cellular activities (AAA) Chro_4669 PF17871 AAA lid domain Chro_4670 PF01808 AICARFT/IMPCHase bienzyme Chro_4670 PF02142 MGS-like domain Chro_4674 PF02397 Bacterial sugar transferase Chro_4675 PF00534 Glycosyl transferases group 1 Chro_4675 PF13439 Glycosyltransferase Family 4 Chro_4676 PF13439 Glycosyltransferase Family 4 Chro_4677 PF01501 Glycosyl transferase family 8 Chro_4677 PF00535 Glycosyl transferase family 2 Chro_4678 PF04932 O-Antigen ligase Chro_4685 PF02706 Chain length determinant protein Chro_4685 PF13807 G-rich domain on putative tyrosine kinase Chro_4685 PF13614 AAA domain Chro_4686 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Chro_4687 PF00330 Aconitase family (aconitate hydratase) Chro_4689 PF07690 Major Facilitator Superfamily Chro_4692 PF00708 Acylphosphatase Chro_4693 PF00793 DAHP synthetase I family Chro_4694 PF00270 DEAD/DEAH box helicase Chro_4694 PF16124 RecQ zinc-binding Chro_4694 PF00271 Helicase conserved C-terminal domain Chro_4698 PF02469 Fasciclin domain Chro_4699 PF00950 ABC 3 transport family Chro_4700 PF00005 ABC transporter Chro_4701 PF01297 Zinc-uptake complex component A periplasmic Chro_4704 PF08241 Methyltransferase domain Chro_4708 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Chro_4709 PF08239 Bacterial SH3 domain Chro_4709 PF01520 N-acetylmuramoyl-L-alanine amidase Chro_4710 PF00117 Glutamine amidotransferase class-I Chro_4710 PF06418 CTP synthase N-terminus Chro_4712 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Chro_4712 PF13288 DXP reductoisomerase C-terminal domain Chro_4712 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Chro_4717 PF02463 RecF/RecN/SMC N terminal domain Chro_4720 PF04909 Amidohydrolase Chro_4721 PF04055 Radical SAM superfamily Chro_4721 PF13282 Domain of unknown function (DUF4070) Chro_4721 PF02310 B12 binding domain Chro_4727 PF00586 AIR synthase related protein, N-terminal domain Chro_4727 PF02769 AIR synthase related protein, C-terminal domain Chro_4728 PF03099 Biotin/lipoate A/B protein ligase family Chro_4730 PF01209 ubiE/COQ5 methyltransferase family Chro_4731 PF00120 Glutamine synthetase, catalytic domain Chro_4731 PF03951 Glutamine synthetase, beta-Grasp domain Chro_4732 PF00502 Phycobilisome protein Chro_4733 PF04198 Putative sugar-binding domain Chro_4733 PF00325 Bacterial regulatory proteins, crp family Chro_4735 PF13416 Bacterial extracellular solute-binding protein Chro_4736 PF00528 Binding-protein-dependent transport system inner membrane component Chro_4737 PF00528 Binding-protein-dependent transport system inner membrane component Chro_4738 PF00005 ABC transporter Chro_4738 PF17912 MalK OB fold domain Chro_4739 PF08125 Mannitol dehydrogenase C-terminal domain Chro_4739 PF01232 Mannitol dehydrogenase Rossmann domain Chro_4741 PF00753 Metallo-beta-lactamase superfamily Chro_4743 PF00005 ABC transporter Chro_4744 PF00528 Binding-protein-dependent transport system inner membrane component Chro_4745 PF00857 Isochorismatase family Chro_4746 PF01554 MatE Chro_4747 PF13460 NAD(P)H-binding Chro_4749 PF13180 PDZ domain Chro_4749 PF00595 PDZ domain Chro_4750 PF01966 HD domain Chro_4750 PF13286 Phosphohydrolase-associated domain Chro_4754 PF00425 chorismate binding enzyme Chro_4754 PF04715 Anthranilate synthase component I, N terminal region Chro_4755 PF02531 PsaD Chro_4756 PF13426 PAS domain Chro_4756 PF00512 His Kinase A (phospho-acceptor) domain Chro_4756 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4756 PF00672 HAMP domain Chro_4757 PF13439 Glycosyltransferase Family 4 Chro_4760 PF16655 PhoD-like phosphatase, N-terminal domain Chro_4760 PF09423 PhoD-like phosphatase Chro_4762 PF00072 Response regulator receiver domain Chro_4762 PF00196 Bacterial regulatory proteins, luxR family Chro_4763 PF01627 Hpt domain Chro_4763 PF01584 CheW-like domain Chro_4763 PF02895 Signal transducing histidine kinase, homodimeric domain Chro_4763 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4763 PF07194 P2 response regulator binding domain Chro_4764 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_4764 PF01590 GAF domain Chro_4766 PF00486 Transcriptional regulatory protein, C terminal Chro_4766 PF00072 Response regulator receiver domain Chro_4769 PF00107 Zinc-binding dehydrogenase Chro_4769 PF08240 Alcohol dehydrogenase GroES-like domain Chro_4771 PF00004 ATPase family associated with various cellular activities (AAA) Chro_4771 PF06480 FtsH Extracellular Chro_4771 PF01434 Peptidase family M41 Chro_4771 PF17862 AAA+ lid domain Chro_4772 PF03358 NADPH-dependent FMN reductase Chro_4773 PF00762 Ferrochelatase Chro_4774 PF00072 Response regulator receiver domain Chro_4774 PF00990 Diguanylate cyclase, GGDEF domain Chro_4777 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Chro_4779 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chro_4779 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Chro_4779 PF00205 Thiamine pyrophosphate enzyme, central domain Chro_4782 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Chro_4784 PF09383 NIL domain Chro_4784 PF00005 ABC transporter Chro_4785 PF00004 ATPase family associated with various cellular activities (AAA) Chro_4785 PF05362 Lon protease (S16) C-terminal proteolytic domain Chro_4785 PF02190 ATP-dependent protease La (LON) substrate-binding domain Chro_4786 PF00338 Ribosomal protein S10p/S20e Chro_4787 PF00009 Elongation factor Tu GTP binding domain Chro_4787 PF03144 Elongation factor Tu domain 2 Chro_4787 PF03143 Elongation factor Tu C-terminal domain Chro_4789 PF00177 Ribosomal protein S7p/S5e Chro_4790 PF00164 Ribosomal protein S12/S23 Chro_4791 PF01521 Iron-sulphur cluster biosynthesis Chro_4792 PF00483 Nucleotidyl transferase Chro_4792 PF01050 Mannose-6-phosphate isomerase Chro_4794 PF01590 GAF domain Chro_4794 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_4795 PF01062 Bestrophin, RFP-TM, chloride channel Chro_4796 PF13614 AAA domain Chro_4798 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_4800 PF00534 Glycosyl transferases group 1 Chro_4800 PF13579 Glycosyl transferase 4-like domain Chro_4801 PF13439 Glycosyltransferase Family 4 Chro_4801 PF00534 Glycosyl transferases group 1 Chro_4802 PF00534 Glycosyl transferases group 1 Chro_4802 PF13439 Glycosyltransferase Family 4 Chro_4806 PF01501 Glycosyl transferase family 8 Chro_4806 PF00535 Glycosyl transferase family 2 Chro_4807 PF08241 Methyltransferase domain Chro_4808 PF00534 Glycosyl transferases group 1 Chro_4808 PF13439 Glycosyltransferase Family 4 Chro_4810 PF16363 GDP-mannose 4,6 dehydratase Chro_4816 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_4817 PF16363 GDP-mannose 4,6 dehydratase Chro_4819 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_4821 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_4822 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Chro_4822 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_4823 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_4824 PF00005 ABC transporter Chro_4829 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Chro_4832 PF13603 Leucyl-tRNA synthetase, Domain 2 Chro_4832 PF08264 Anticodon-binding domain of tRNA Chro_4832 PF00133 tRNA synthetases class I (I, L, M and V) Chro_4832 PF09334 tRNA synthetases class I (M) Chro_4835 PF04542 Sigma-70 region 2 Chro_4835 PF08281 Sigma-70, region 4 Chro_4838 PF10145 Phage-related minor tail protein Chro_4838 PF01551 Peptidase family M23 Chro_4838 PF01464 Transglycosylase SLT domain Chro_4839 PF00999 Sodium/hydrogen exchanger family Chro_4839 PF02254 TrkA-N domain Chro_4841 PF01678 Diaminopimelate epimerase Chro_4844 PF00400 WD domain, G-beta repeat Chro_4844 PF00931 NB-ARC domain Chro_4846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4846 PF00512 His Kinase A (phospho-acceptor) domain Chro_4847 PF01497 Periplasmic binding protein Chro_4849 PF01300 Telomere recombination Chro_4850 PF01969 Protein of unknown function DUF111 Chro_4858 PF10716 NADH dehydrogenase transmembrane subunit Chro_4861 PF02223 Thymidylate kinase Chro_4863 PF09115 DNA polymerase III, delta subunit, C terminal Chro_4866 PF01209 ubiE/COQ5 methyltransferase family Chro_4876 PF17820 PDZ domain Chro_4876 PF02163 Peptidase family M50 Chro_4877 PF00795 Carbon-nitrogen hydrolase Chro_4878 PF01116 Fructose-bisphosphate aldolase class-II Chro_4880 PF00583 Acetyltransferase (GNAT) family Chro_4881 PF12697 Alpha/beta hydrolase family Chro_4885 PF02441 Flavoprotein Chro_4886 PF00773 RNB domain Chro_4886 PF00575 S1 RNA binding domain Chro_4886 PF08206 Ribonuclease B OB domain Chro_4886 PF17876 Cold shock domain Chro_4890 PF03190 Protein of unknown function, DUF255 Chro_4891 PF12169 DNA polymerase III subunits gamma and tau domain III Chro_4893 PF01888 CbiD Chro_4897 PF01638 HxlR-like helix-turn-helix Chro_4898 PF00107 Zinc-binding dehydrogenase Chro_4898 PF08240 Alcohol dehydrogenase GroES-like domain Chro_4901 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_4902 PF01790 Prolipoprotein diacylglyceryl transferase Chro_4903 PF02789 Cytosol aminopeptidase family, N-terminal domain Chro_4903 PF00883 Cytosol aminopeptidase family, catalytic domain Chro_4905 PF01202 Shikimate kinase Chro_4907 PF00069 Protein kinase domain Chro_4909 PF00072 Response regulator receiver domain Chro_4909 PF00486 Transcriptional regulatory protein, C terminal Chro_4918 PF00664 ABC transporter transmembrane region Chro_4918 PF00005 ABC transporter Chro_4918 PF03412 Peptidase C39 family Chro_4920 PF02875 Mur ligase family, glutamate ligase domain Chro_4920 PF08245 Mur ligase middle domain Chro_4921 PF13545 Crp-like helix-turn-helix domain Chro_4922 PF00072 Response regulator receiver domain Chro_4922 PF09308 LuxQ, periplasmic Chro_4922 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4922 PF00512 His Kinase A (phospho-acceptor) domain Chro_4923 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4923 PF00072 Response regulator receiver domain Chro_4923 PF01627 Hpt domain Chro_4923 PF00672 HAMP domain Chro_4923 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_4923 PF00512 His Kinase A (phospho-acceptor) domain Chro_4926 PF01339 CheB methylesterase Chro_4928 PF01098 Cell cycle protein Chro_4929 PF10609 NUBPL iron-transfer P-loop NTPase Chro_4929 PF01883 Iron-sulfur cluster assembly protein Chro_4930 PF02698 DUF218 domain Chro_4932 PF14693 Ribosomal protein TL5, C-terminal domain Chro_4932 PF01386 Ribosomal L25p family Chro_4933 PF00709 Adenylosuccinate synthetase Chro_4934 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Chro_4935 PF08032 RNA 2'-O ribose methyltransferase substrate binding Chro_4935 PF00588 SpoU rRNA Methylase family Chro_4938 PF00453 Ribosomal protein L20 Chro_4939 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_4939 PF01464 Transglycosylase SLT domain Chro_4940 PF03480 Bacterial extracellular solute-binding protein, family 7 Chro_4944 PF02091 Glycyl-tRNA synthetase alpha subunit Chro_4946 PF01979 Amidohydrolase family Chro_4947 PF00857 Isochorismatase family Chro_4952 PF00392 Bacterial regulatory proteins, gntR family Chro_4952 PF00155 Aminotransferase class I and II Chro_4954 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Chro_4960 PF00085 Thioredoxin Chro_4964 PF00011 Hsp20/alpha crystallin family Chro_4965 PF00696 Amino acid kinase family Chro_4971 PF06596 Photosystem II reaction centre X protein (PsbX) Chro_4972 PF07444 Ycf66 protein N-terminus Chro_4975 PF13085 2Fe-2S iron-sulfur cluster binding domain Chro_4978 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_4979 PF02570 Precorrin-8X methylmutase Chro_4982 PF02814 UreE urease accessory protein, N-terminal domain Chro_4982 PF05194 UreE urease accessory protein, C-terminal domain Chro_4983 PF01730 UreF Chro_4984 PF08241 Methyltransferase domain Chro_4985 PF03186 CobD/Cbib protein Chro_4986 PF02082 Transcriptional regulator Chro_4988 PF00654 Voltage gated chloride channel Chro_4990 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Chro_4992 PF00440 Bacterial regulatory proteins, tetR family Chro_4994 PF13188 PAS domain Chro_4994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_4994 PF00512 His Kinase A (phospho-acceptor) domain Chro_4994 PF08448 PAS fold Chro_4994 PF00072 Response regulator receiver domain Chro_4996 PF00962 Adenosine/AMP deaminase Chro_4997 PF00860 Permease family Chro_4998 PF00005 ABC transporter Chro_4998 PF12399 Branched-chain amino acid ATP-binding cassette transporter Chro_4999 PF02653 Branched-chain amino acid transport system / permease component Chro_4999 PF11862 Domain of unknown function (DUF3382) Chro_5000 PF00342 Phosphoglucose isomerase Chro_5005 PF00849 RNA pseudouridylate synthase Chro_5007 PF00174 Oxidoreductase molybdopterin binding domain Chro_5011 PF00484 Carbonic anhydrase Chro_5013 PF01266 FAD dependent oxidoreductase Chro_5013 PF05690 Thiazole biosynthesis protein ThiG Chro_5014 PF00561 alpha/beta hydrolase fold Chro_5018 PF05378 Hydantoinase/oxoprolinase N-terminal region Chro_5018 PF01968 Hydantoinase/oxoprolinase Chro_5019 PF04389 Peptidase family M28 Chro_5022 PF03706 Lysylphosphatidylglycerol synthase TM region Chro_5026 PF00223 Photosystem I psaA/psaB protein Chro_5027 PF00223 Photosystem I psaA/psaB protein Chro_5037 PF13460 NAD(P)H-binding Chro_5041 PF00343 Carbohydrate phosphorylase Chro_5041 PF11897 Protein of unknown function (DUF3417) Chro_5043 PF00069 Protein kinase domain Chro_5062 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Chro_5062 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Chro_5063 PF00528 Binding-protein-dependent transport system inner membrane component Chro_5064 PF17755 UvrA DNA-binding domain Chro_5064 PF17760 UvrA interaction domain Chro_5065 PF03808 Glycosyl transferase WecB/TagA/CpsF family Chro_5071 PF01427 D-ala-D-ala dipeptidase Chro_5073 PF00069 Protein kinase domain Chro_5074 PF01809 Putative membrane protein insertion efficiency factor Chro_5076 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_5078 PF00962 Adenosine/AMP deaminase Chro_5085 PF02719 Polysaccharide biosynthesis protein Chro_5086 PF12706 Beta-lactamase superfamily domain Chro_5086 PF00753 Metallo-beta-lactamase superfamily Chro_5093 PF00484 Carbonic anhydrase Chro_5095 PF00528 Binding-protein-dependent transport system inner membrane component Chro_5097 PF03441 FAD binding domain of DNA photolyase Chro_5097 PF00875 DNA photolyase Chro_5098 PF00183 Hsp90 protein Chro_5102 PF07685 CobB/CobQ-like glutamine amidotransferase domain Chro_5104 PF08353 Domain of unknown function (DUF1727) Chro_5104 PF08245 Mur ligase middle domain Chro_5106 PF00722 Glycosyl hydrolases family 16 Chro_5107 PF00512 His Kinase A (phospho-acceptor) domain Chro_5107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5107 PF18415 Histidine kinase receptor ArcB trans-membrane domain Chro_5108 PF16416 ARM-like repeat domain, GUN4-N terminal Chro_5108 PF05419 GUN4-like Chro_5109 PF00180 Isocitrate/isopropylmalate dehydrogenase Chro_5111 PF01593 Flavin containing amine oxidoreductase Chro_5112 PF00069 Protein kinase domain Chro_5112 PF08239 Bacterial SH3 domain Chro_5119 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Chro_5123 PF02468 Photosystem II reaction centre N protein (psbN) Chro_5124 PF00737 Photosystem II 10 kDa phosphoprotein Chro_5125 PF02416 mttA/Hcf106 family Chro_5126 PF01195 Peptidyl-tRNA hydrolase Chro_5131 PF14437 MafB19-like deaminase Chro_5133 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_5133 PF01627 Hpt domain Chro_5133 PF00672 HAMP domain Chro_5133 PF00072 Response regulator receiver domain Chro_5133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5133 PF00512 His Kinase A (phospho-acceptor) domain Chro_5134 PF00563 EAL domain Chro_5134 PF00990 Diguanylate cyclase, GGDEF domain Chro_5134 PF08447 PAS fold Chro_5134 PF08448 PAS fold Chro_5142 PF06724 Domain of Unknown Function (DUF1206) Chro_5149 PF04760 Translation initiation factor IF-2, N-terminal region Chro_5149 PF00009 Elongation factor Tu GTP binding domain Chro_5149 PF11987 Translation-initiation factor 2 Chro_5151 PF08529 NusA N-terminal domain Chro_5151 PF00575 S1 RNA binding domain Chro_5151 PF13184 NusA-like KH domain Chro_5152 PF02576 RimP N-terminal domain Chro_5155 PF12833 Helix-turn-helix domain Chro_5155 PF06719 AraC-type transcriptional regulator N-terminus Chro_5156 PF00580 UvrD/REP helicase N-terminal domain Chro_5156 PF12705 PD-(D/E)XK nuclease superfamily Chro_5156 PF13361 UvrD-like helicase C-terminal domain Chro_5163 PF01523 Putative modulator of DNA gyrase Chro_5164 PF01523 Putative modulator of DNA gyrase Chro_5165 PF01814 Hemerythrin HHE cation binding domain Chro_5167 PF03793 PASTA domain Chro_5167 PF00069 Protein kinase domain Chro_5168 PF12419 SNF2 Helicase protein Chro_5168 PF00176 SNF2 family N-terminal domain Chro_5168 PF00271 Helicase conserved C-terminal domain Chro_5171 PF00483 Nucleotidyl transferase Chro_5171 PF01050 Mannose-6-phosphate isomerase Chro_5174 PF02934 GatB/GatE catalytic domain Chro_5174 PF02637 GatB domain Chro_5175 PF12852 Cupin Chro_5175 PF12833 Helix-turn-helix domain Chro_5176 PF07715 TonB-dependent Receptor Plug Domain Chro_5176 PF00593 TonB dependent receptor Chro_5178 PF07715 TonB-dependent Receptor Plug Domain Chro_5178 PF00593 TonB dependent receptor Chro_5179 PF01960 ArgJ family Chro_5180 PF00486 Transcriptional regulatory protein, C terminal Chro_5180 PF00072 Response regulator receiver domain Chro_5181 PF16736 Single Cache-like Chro_5181 PF00989 PAS fold Chro_5181 PF00512 His Kinase A (phospho-acceptor) domain Chro_5181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5182 PF03023 Lipid II flippase MurJ Chro_5183 PF11378 Protein of unknown function (DUF3181) Chro_5185 PF00486 Transcriptional regulatory protein, C terminal Chro_5185 PF00072 Response regulator receiver domain Chro_5187 PF00072 Response regulator receiver domain Chro_5187 PF00486 Transcriptional regulatory protein, C terminal Chro_5189 PF00834 Ribulose-phosphate 3 epimerase family Chro_5195 PF01425 Amidase Chro_5197 PF01593 Flavin containing amine oxidoreductase Chro_5206 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Chro_5207 PF01475 Ferric uptake regulator family Chro_5208 PF01145 SPFH domain / Band 7 family Chro_5210 PF02941 Ferredoxin thioredoxin reductase variable alpha chain Chro_5212 PF01218 Coproporphyrinogen III oxidase Chro_5214 PF06206 CpeT/CpcT family (DUF1001) Chro_5216 PF11264 Thylakoid formation protein Chro_5218 PF02472 Biopolymer transport protein ExbD/TolR Chro_5219 PF01618 MotA/TolQ/ExbB proton channel family Chro_5221 PF00512 His Kinase A (phospho-acceptor) domain Chro_5221 PF00072 Response regulator receiver domain Chro_5221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5221 PF09308 LuxQ, periplasmic Chro_5223 PF05067 Manganese containing catalase Chro_5225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Chro_5229 PF00171 Aldehyde dehydrogenase family Chro_5230 PF01791 DeoC/LacD family aldolase Chro_5233 PF00155 Aminotransferase class I and II Chro_5234 PF01425 Amidase Chro_5237 PF00561 alpha/beta hydrolase fold Chro_5238 PF13439 Glycosyltransferase Family 4 Chro_5238 PF00534 Glycosyl transferases group 1 Chro_5239 PF16363 GDP-mannose 4,6 dehydratase Chro_5240 PF13477 Glycosyl transferase 4-like Chro_5240 PF00534 Glycosyl transferases group 1 Chro_5242 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_5242 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Chro_5243 PF08241 Methyltransferase domain Chro_5244 PF00398 Ribosomal RNA adenine dimethylase Chro_5247 PF14602 Hexapeptide repeat of succinyl-transferase Chro_5247 PF00132 Bacterial transferase hexapeptide (six repeats) Chro_5247 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Chro_5248 PF00005 ABC transporter Chro_5249 PF01061 ABC-2 type transporter Chro_5251 PF17886 HSP20-like domain found in ArsA Chro_5251 PF02374 Anion-transporting ATPase Chro_5252 PF01040 UbiA prenyltransferase family Chro_5254 PF00491 Arginase family Chro_5256 PF00696 Amino acid kinase family Chro_5257 PF01765 Ribosome recycling factor Chro_5258 PF01593 Flavin containing amine oxidoreductase Chro_5267 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Chro_5267 PF07733 Bacterial DNA polymerase III alpha NTPase domain Chro_5267 PF02811 PHP domain Chro_5267 PF14579 Helix-hairpin-helix motif Chro_5267 PF01336 OB-fold nucleic acid binding domain Chro_5269 PF07733 Bacterial DNA polymerase III alpha NTPase domain Chro_5269 PF01336 OB-fold nucleic acid binding domain Chro_5269 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Chro_5269 PF14579 Helix-hairpin-helix motif Chro_5269 PF02811 PHP domain Chro_5272 PF00069 Protein kinase domain Chro_5279 PF04966 Carbohydrate-selective porin, OprB family Chro_5279 PF00395 S-layer homology domain Chro_5281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5281 PF00989 PAS fold Chro_5281 PF00512 His Kinase A (phospho-acceptor) domain Chro_5282 PF02595 Glycerate kinase family Chro_5287 PF13416 Bacterial extracellular solute-binding protein Chro_5289 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Chro_5289 PF00117 Glutamine amidotransferase class-I Chro_5297 PF03466 LysR substrate binding domain Chro_5297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Chro_5298 PF00378 Enoyl-CoA hydratase/isomerase Chro_5301 PF04012 PspA/IM30 family Chro_5302 PF04012 PspA/IM30 family Chro_5304 PF00085 Thioredoxin Chro_5305 PF00155 Aminotransferase class I and II Chro_5306 PF00072 Response regulator receiver domain Chro_5313 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Chro_5313 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Chro_5315 PF00101 Ribulose bisphosphate carboxylase, small chain Chro_5317 PF00101 Ribulose bisphosphate carboxylase, small chain Chro_5317 PF00004 ATPase family associated with various cellular activities (AAA) Chro_5322 PF00128 Alpha amylase, catalytic domain Chro_5322 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Chro_5323 PF00862 Sucrose synthase Chro_5323 PF00534 Glycosyl transferases group 1 Chro_5324 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Chro_5327 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Chro_5327 PF08479 POTRA domain, ShlB-type Chro_5330 PF00664 ABC transporter transmembrane region Chro_5330 PF00005 ABC transporter Chro_5333 PF02685 Glucokinase Chro_5342 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Chro_5342 PF00355 Rieske [2Fe-2S] domain Chro_5343 PF00155 Aminotransferase class I and II Chro_5346 PF01370 NAD dependent epimerase/dehydratase family Chro_5347 PF12704 MacB-like periplasmic core domain Chro_5347 PF02687 FtsX-like permease family Chro_5347 PF00005 ABC transporter Chro_5350 PF01933 Uncharacterised protein family UPF0052 Chro_5351 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Chro_5352 PF01810 LysE type translocator Chro_5353 PF03707 Bacterial signalling protein N terminal repeat Chro_5353 PF00563 EAL domain Chro_5353 PF00990 Diguanylate cyclase, GGDEF domain Chro_5354 PF01979 Amidohydrolase family Chro_5355 PF10502 Signal peptidase, peptidase S26 Chro_5357 PF00300 Histidine phosphatase superfamily (branch 1) Chro_5359 PF00403 Heavy-metal-associated domain Chro_5363 PF01738 Dienelactone hydrolase family Chro_5364 PF12697 Alpha/beta hydrolase family Chro_5365 PF00156 Phosphoribosyl transferase domain Chro_5366 PF00586 AIR synthase related protein, N-terminal domain Chro_5366 PF02769 AIR synthase related protein, C-terminal domain Chro_5366 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Chro_5367 PF09308 LuxQ, periplasmic Chro_5367 PF00512 His Kinase A (phospho-acceptor) domain Chro_5367 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5367 PF00072 Response regulator receiver domain Chro_5368 PF00072 Response regulator receiver domain Chro_5368 PF08769 Sporulation initiation factor Spo0A C terminal Chro_5369 PF01590 GAF domain Chro_5369 PF00360 Phytochrome region Chro_5369 PF08446 PAS fold Chro_5369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5369 PF00512 His Kinase A (phospho-acceptor) domain Chro_5374 PF08669 Glycine cleavage T-protein C-terminal barrel domain Chro_5374 PF01571 Aminomethyltransferase folate-binding domain Chro_5376 PF02347 Glycine cleavage system P-protein Chro_5377 PF06055 Exopolysaccharide synthesis, ExoD Chro_5378 PF02417 Chromate transporter Chro_5379 PF09335 SNARE associated Golgi protein Chro_5380 PF00696 Amino acid kinase family Chro_5380 PF01842 ACT domain Chro_5380 PF13840 ACT domain Chro_5381 PF00072 Response regulator receiver domain Chro_5381 PF00512 His Kinase A (phospho-acceptor) domain Chro_5381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5381 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_5382 PF00072 Response regulator receiver domain Chro_5383 PF00360 Phytochrome region Chro_5383 PF08446 PAS fold Chro_5383 PF00512 His Kinase A (phospho-acceptor) domain Chro_5383 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5383 PF01590 GAF domain Chro_5386 PF00011 Hsp20/alpha crystallin family Chro_5389 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Chro_5389 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Chro_5390 PF00672 HAMP domain Chro_5390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5390 PF00512 His Kinase A (phospho-acceptor) domain Chro_5390 PF13426 PAS domain Chro_5392 PF00072 Response regulator receiver domain Chro_5393 PF01590 GAF domain Chro_5393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5393 PF00512 His Kinase A (phospho-acceptor) domain Chro_5393 PF08446 PAS fold Chro_5393 PF00360 Phytochrome region Chro_5394 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Chro_5394 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Chro_5395 PF00072 Response regulator receiver domain Chro_5395 PF00486 Transcriptional regulatory protein, C terminal Chro_5397 PF00462 Glutaredoxin Chro_5398 PF01722 BolA-like protein Chro_5401 PF14437 MafB19-like deaminase Chro_5402 PF00462 Glutaredoxin Chro_5405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Chro_5406 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Chro_5406 PF01488 Shikimate / quinate 5-dehydrogenase Chro_5406 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Chro_5408 PF01934 Protein of unknown function DUF86 Chro_5412 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Chro_5413 PF16124 RecQ zinc-binding Chro_5413 PF00271 Helicase conserved C-terminal domain Chro_5413 PF09382 RQC domain Chro_5413 PF00270 DEAD/DEAH box helicase Chro_5413 PF00570 HRDC domain Chro_5415 PF09570 SinI restriction endonuclease Chro_5416 PF00145 C-5 cytosine-specific DNA methylase Chro_5416 PF12728 Helix-turn-helix domain Chro_5417 PF00072 Response regulator receiver domain Chro_5417 PF00486 Transcriptional regulatory protein, C terminal Chro_5418 PF00072 Response regulator receiver domain Chro_5420 PF01590 GAF domain Chro_5420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Chro_5421 PF00072 Response regulator receiver domain Chro_5421 PF01584 CheW-like domain Chro_5421 PF01627 Hpt domain Chro_5421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5425 PF01479 S4 domain Chro_5425 PF00163 Ribosomal protein S4/S9 N-terminal domain Chro_5429 PF13545 Crp-like helix-turn-helix domain Chro_5430 PF12849 PBP superfamily domain Chro_5435 PF13458 Periplasmic binding protein Chro_5436 PF02308 MgtC family Chro_5438 PF00069 Protein kinase domain Chro_5442 PF00085 Thioredoxin Chro_5443 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Chro_5443 PF00361 Proton-conducting membrane transporter Chro_5443 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Chro_5444 PF00361 Proton-conducting membrane transporter Chro_5447 PF01116 Fructose-bisphosphate aldolase class-II Chro_5450 PF00575 S1 RNA binding domain Chro_5451 PF03477 ATP cone domain Chro_5453 PF00421 Photosystem II protein Chro_5456 PF00580 UvrD/REP helicase N-terminal domain Chro_5456 PF13361 UvrD-like helicase C-terminal domain Chro_5457 PF13673 Acetyltransferase (GNAT) domain Chro_5457 PF04229 GrpB protein Chro_5462 PF08865 Domain of unknown function (DUF1830) Chro_5463 PF00395 S-layer homology domain Chro_5463 PF04966 Carbohydrate-selective porin, OprB family Chro_5464 PF00684 DnaJ central domain Chro_5464 PF01556 DnaJ C terminal domain Chro_5464 PF00226 DnaJ domain Chro_5466 PF01255 Putative undecaprenyl diphosphate synthase Chro_5467 PF02457 DisA bacterial checkpoint controller nucleotide-binding Chro_5468 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Chro_5468 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Chro_5469 PF00583 Acetyltransferase (GNAT) family Chro_5469 PF13673 Acetyltransferase (GNAT) domain Chro_5470 PF07724 AAA domain (Cdc48 subfamily) Chro_5470 PF17871 AAA lid domain Chro_5470 PF02861 Clp amino terminal domain, pathogenicity island component Chro_5470 PF10431 C-terminal, D2-small domain, of ClpB protein Chro_5470 PF00004 ATPase family associated with various cellular activities (AAA) Chro_5472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5472 PF00512 His Kinase A (phospho-acceptor) domain Chro_5472 PF08448 PAS fold Chro_5472 PF13188 PAS domain Chro_5472 PF00072 Response regulator receiver domain Chro_5473 PF02391 MoaE protein Chro_5475 PF01593 Flavin containing amine oxidoreductase Chro_5476 PF00005 ABC transporter Chro_5481 PF00069 Protein kinase domain Chro_5482 PF10017 Histidine-specific methyltransferase, SAM-dependent Chro_5483 PF03781 Sulfatase-modifying factor enzyme 1 Chro_5483 PF12867 DinB superfamily Chro_5484 PF13230 Glutamine amidotransferases class-II Chro_5488 PF03167 Uracil DNA glycosylase superfamily Chro_5489 PF09297 NADH pyrophosphatase zinc ribbon domain Chro_5489 PF00293 NUDIX domain Chro_5489 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Chro_5490 PF12848 ABC transporter Chro_5490 PF16326 ABC transporter C-terminal domain Chro_5490 PF00005 ABC transporter Chro_5492 PF02445 Quinolinate synthetase A protein Chro_5495 PF00459 Inositol monophosphatase family Chro_5497 PF00899 ThiF family Chro_5497 PF00581 Rhodanese-like domain Chro_5498 PF02773 S-adenosylmethionine synthetase, C-terminal domain Chro_5498 PF02772 S-adenosylmethionine synthetase, central domain Chro_5498 PF00438 S-adenosylmethionine synthetase, N-terminal domain Chro_5499 PF00171 Aldehyde dehydrogenase family Chro_5500 PF00512 His Kinase A (phospho-acceptor) domain Chro_5500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Chro_5500 PF00072 Response regulator receiver domain Chro_5500 PF00672 HAMP domain Chro_5500 PF01627 Hpt domain Chro_5500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5501 PF00449 Urease alpha-subunit, N-terminal domain Chro_5501 PF01979 Amidohydrolase family Chro_5502 PF00699 Urease beta subunit Chro_5503 PF03707 Bacterial signalling protein N terminal repeat Chro_5503 PF00990 Diguanylate cyclase, GGDEF domain Chro_5503 PF00563 EAL domain Chro_5505 PF00657 GDSL-like Lipase/Acylhydrolase Chro_5506 PF00005 ABC transporter Chro_5509 PF00909 Ammonium Transporter Family Chro_5510 PF00731 AIR carboxylase Chro_5511 PF01979 Amidohydrolase family Chro_5512 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus Chro_5513 PF04241 Protein of unknown function (DUF423) Chro_5515 PF00171 Aldehyde dehydrogenase family Chro_5519 PF03330 Lytic transglycolase Chro_5520 PF02769 AIR synthase related protein, C-terminal domain Chro_5520 PF00586 AIR synthase related protein, N-terminal domain Chro_5521 PF07690 Major Facilitator Superfamily Chro_5524 PF00005 ABC transporter Chro_5524 PF00664 ABC transporter transmembrane region Chro_5527 PF03412 Peptidase C39 family Chro_5527 PF00005 ABC transporter Chro_5527 PF00664 ABC transporter transmembrane region Chro_5530 PF07683 Cobalamin synthesis protein cobW C-terminal domain Chro_5530 PF02492 CobW/HypB/UreG, nucleotide-binding domain Chro_5531 PF08446 PAS fold Chro_5531 PF00360 Phytochrome region Chro_5531 PF01590 GAF domain Chro_5531 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5531 PF00512 His Kinase A (phospho-acceptor) domain Chro_5532 PF00072 Response regulator receiver domain Chro_5533 PF00512 His Kinase A (phospho-acceptor) domain Chro_5533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5534 PF00294 pfkB family carbohydrate kinase Chro_5535 PF05973 Phage derived protein Gp49-like (DUF891) Chro_5537 PF00005 ABC transporter Chro_5538 PF00528 Binding-protein-dependent transport system inner membrane component Chro_5539 PF00528 Binding-protein-dependent transport system inner membrane component Chro_5540 PF00497 Bacterial extracellular solute-binding proteins, family 3 Chro_5545 PF03851 UV-endonuclease UvdE Chro_5548 PF02535 ZIP Zinc transporter Chro_5552 PF07685 CobB/CobQ-like glutamine amidotransferase domain Chro_5552 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Chro_5554 PF07690 Major Facilitator Superfamily Chro_5560 PF04545 Sigma-70, region 4 Chro_5560 PF04539 Sigma-70 region 3 Chro_5560 PF04542 Sigma-70 region 2 Chro_5560 PF00140 Sigma-70 factor, region 1.2 Chro_5561 PF01027 Inhibitor of apoptosis-promoting Bax1 Chro_5565 PF02130 Uncharacterized protein family UPF0054 Chro_5566 PF01219 Prokaryotic diacylglycerol kinase Chro_5567 PF00117 Glutamine amidotransferase class-I Chro_5571 PF00925 GTP cyclohydrolase II Chro_5574 PF01593 Flavin containing amine oxidoreductase Chro_5576 PF12833 Helix-turn-helix domain Chro_5578 PF00266 Aminotransferase class-V Chro_5580 PF01894 Uncharacterised protein family UPF0047 Chro_5581 PF01784 NIF3 (NGG1p interacting factor 3) Chro_5584 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Chro_5584 PF12706 Beta-lactamase superfamily domain Chro_5586 PF02245 Methylpurine-DNA glycosylase (MPG) Chro_5587 PF01741 Large-conductance mechanosensitive channel, MscL Chro_5588 PF08241 Methyltransferase domain Chro_5591 PF05151 Photosystem II reaction centre M protein (PsbM) Chro_5592 PF00582 Universal stress protein family Chro_5593 PF00395 S-layer homology domain Chro_5593 PF04966 Carbohydrate-selective porin, OprB family Chro_5594 PF02082 Transcriptional regulator Chro_5595 PF00291 Pyridoxal-phosphate dependent enzyme Chro_5597 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Chro_5597 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Chro_5605 PF02734 DAK2 domain Chro_5606 PF02733 Dak1 domain Chro_5608 PF00072 Response regulator receiver domain Chro_5608 PF00486 Transcriptional regulatory protein, C terminal Chro_5609 PF01327 Polypeptide deformylase Chro_5610 PF13180 PDZ domain Chro_5611 PF13180 PDZ domain Chro_5612 PF10502 Signal peptidase, peptidase S26 Chro_5615 PF07690 Major Facilitator Superfamily Chro_5616 PF02641 Uncharacterized ACR, COG1993 Chro_5619 PF01925 Sulfite exporter TauE/SafE Chro_5620 PF06450 Bacterial Na+/H+ antiporter B (NhaB) Chro_5624 PF00990 Diguanylate cyclase, GGDEF domain Chro_5625 PF01062 Bestrophin, RFP-TM, chloride channel Chro_5626 PF16736 Single Cache-like Chro_5626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5626 PF00512 His Kinase A (phospho-acceptor) domain Chro_5626 PF00989 PAS fold Chro_5627 PF01627 Hpt domain Chro_5627 PF00072 Response regulator receiver domain Chro_5627 PF00486 Transcriptional regulatory protein, C terminal Chro_5629 PF05067 Manganese containing catalase Chro_5630 PF00230 Major intrinsic protein Chro_5634 PF01627 Hpt domain Chro_5634 PF00072 Response regulator receiver domain Chro_5634 PF00486 Transcriptional regulatory protein, C terminal Chro_5636 PF02583 Metal-sensitive transcriptional repressor Chro_5637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5637 PF00512 His Kinase A (phospho-acceptor) domain Chro_5638 PF00486 Transcriptional regulatory protein, C terminal Chro_5638 PF00072 Response regulator receiver domain Chro_5641 PF09572 XamI restriction endonuclease Chro_5642 PF07669 Eco57I restriction-modification methylase Chro_5643 PF07731 Multicopper oxidase Chro_5643 PF07732 Multicopper oxidase Chro_5644 PF00873 AcrB/AcrD/AcrF family Chro_5653 PF07731 Multicopper oxidase Chro_5653 PF07732 Multicopper oxidase Chro_5653 PF00394 Multicopper oxidase Chro_5655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Chro_5655 PF07992 Pyridine nucleotide-disulphide oxidoreductase Chro_5657 PF00258 Flavodoxin Chro_5659 PF13358 DDE superfamily endonuclease Chro_5664 PF00403 Heavy-metal-associated domain Chro_5666 PF13411 MerR HTH family regulatory protein Chro_5668 PF01209 ubiE/COQ5 methyltransferase family Chro_5669 PF08281 Sigma-70, region 4 Chro_5669 PF12680 SnoaL-like domain Chro_5669 PF04542 Sigma-70 region 2 Chro_5671 PF01209 ubiE/COQ5 methyltransferase family Chro_5674 PF00196 Bacterial regulatory proteins, luxR family Chro_5674 PF17874 MalT-like TPR region Chro_5681 PF13649 Methyltransferase domain Chro_5682 PF01594 AI-2E family transporter Chro_5684 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Chro_5685 PF00924 Mechanosensitive ion channel Chro_5690 PF07732 Multicopper oxidase Chro_5691 PF01566 Natural resistance-associated macrophage protein Chro_5692 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Chro_5696 PF01022 Bacterial regulatory protein, arsR family Chro_5697 PF00403 Heavy-metal-associated domain Chro_5698 PF07884 Vitamin K epoxide reductase family Chro_5699 PF16123 Hydroxyacylglutathione hydrolase C-terminus Chro_5699 PF00753 Metallo-beta-lactamase superfamily Chro_5706 PF01022 Bacterial regulatory protein, arsR family Chro_5708 PF07884 Vitamin K epoxide reductase family Chro_5709 PF04966 Carbohydrate-selective porin, OprB family Chro_5709 PF00395 S-layer homology domain Chro_5710 PF04966 Carbohydrate-selective porin, OprB family Chro_5710 PF00395 S-layer homology domain Chro_5717 PF13533 Biotin-lipoyl like Chro_5718 PF00873 AcrB/AcrD/AcrF family Chro_5720 PF00072 Response regulator receiver domain Chro_5720 PF00486 Transcriptional regulatory protein, C terminal Chro_5721 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5721 PF16736 Single Cache-like Chro_5721 PF00989 PAS fold Chro_5721 PF00512 His Kinase A (phospho-acceptor) domain Chro_5722 PF03040 CemA family Chro_5723 PF16916 Dimerisation domain of Zinc Transporter Chro_5723 PF01545 Cation efflux family Chro_5725 PF13358 DDE superfamily endonuclease Chro_5726 PF00140 Sigma-70 factor, region 1.2 Chro_5726 PF04545 Sigma-70, region 4 Chro_5726 PF04539 Sigma-70 region 3 Chro_5726 PF04542 Sigma-70 region 2 Chro_5727 PF01062 Bestrophin, RFP-TM, chloride channel Chro_5729 PF04225 Opacity-associated protein A LysM-like domain Chro_5729 PF01551 Peptidase family M23 Chro_5731 PF00403 Heavy-metal-associated domain Chro_5733 PF00781 Diacylglycerol kinase catalytic domain Chro_5734 PF16916 Dimerisation domain of Zinc Transporter Chro_5734 PF01545 Cation efflux family Chro_5742 PF00436 Single-strand binding protein family Chro_5749 PF00400 WD domain, G-beta repeat Chro_5749 PF00931 NB-ARC domain Chro_5751 PF04966 Carbohydrate-selective porin, OprB family Chro_5751 PF00395 S-layer homology domain Chro_5752 PF00301 Rubredoxin Chro_5753 PF00196 Bacterial regulatory proteins, luxR family Chro_5753 PF00072 Response regulator receiver domain Chro_5757 PF08240 Alcohol dehydrogenase GroES-like domain Chro_5757 PF00107 Zinc-binding dehydrogenase Chro_5770 PF02899 Phage integrase, N-terminal SAM-like domain Chro_5770 PF00589 Phage integrase family Chro_5794 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Chro_5809 PF09456 RcsC Alpha-Beta-Loop (ABL) Chro_5809 PF00512 His Kinase A (phospho-acceptor) domain Chro_5809 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5809 PF00072 Response regulator receiver domain Chro_5810 PF00072 Response regulator receiver domain Chro_5810 PF00196 Bacterial regulatory proteins, luxR family Chro_5811 PF00067 Cytochrome P450 Chro_5812 PF00440 Bacterial regulatory proteins, tetR family Chro_5825 PF01434 Peptidase family M41 Chro_5825 PF00004 ATPase family associated with various cellular activities (AAA) Chro_5825 PF17862 AAA+ lid domain Chro_5833 PF03795 YCII-related domain Chro_5834 PF04542 Sigma-70 region 2 Chro_5834 PF08281 Sigma-70, region 4 Chro_5847 PF00717 Peptidase S24-like Chro_5848 PF11799 impB/mucB/samB family C-terminal domain Chro_5848 PF00817 impB/mucB/samB family Chro_5848 PF13438 Domain of unknown function (DUF4113) Chro_5850 PF00686 Starch binding domain Chro_5850 PF02806 Alpha amylase, C-terminal all-beta domain Chro_5850 PF00128 Alpha amylase, catalytic domain Chro_5874 PF01797 Transposase IS200 like Chro_5875 PF12323 Helix-turn-helix domain Chro_5875 PF07282 Putative transposase DNA-binding domain Chro_5875 PF01385 Probable transposase Chro_5878 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB Chro_5879 PF01381 Helix-turn-helix Chro_5883 PF02899 Phage integrase, N-terminal SAM-like domain Chro_5883 PF00589 Phage integrase family Chro_5884 PF02899 Phage integrase, N-terminal SAM-like domain Chro_5884 PF00589 Phage integrase family Chro_5889 PF00035 Double-stranded RNA binding motif Chro_5889 PF14622 Ribonuclease-III-like Chro_5891 PF00176 SNF2 family N-terminal domain Chro_5891 PF00271 Helicase conserved C-terminal domain Chro_5892 PF12161 HsdM N-terminal domain Chro_5892 PF02384 N-6 DNA Methylase Chro_5897 PF01850 PIN domain Chro_5898 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Chro_5899 PF00271 Helicase conserved C-terminal domain Chro_5899 PF09369 Domain of unknown function (DUF1998) Chro_5899 PF00270 DEAD/DEAH box helicase Chro_5907 PF00712 DNA polymerase III beta subunit, N-terminal domain Chro_5907 PF02767 DNA polymerase III beta subunit, central domain Chro_5907 PF02768 DNA polymerase III beta subunit, C-terminal domain Chro_5908 PF12169 DNA polymerase III subunits gamma and tau domain III Chro_5914 PF09115 DNA polymerase III, delta subunit, C terminal Chro_5916 PF00873 AcrB/AcrD/AcrF family Chro_5918 PF00072 Response regulator receiver domain Chro_5918 PF00486 Transcriptional regulatory protein, C terminal Chro_5919 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5919 PF16736 Single Cache-like Chro_5919 PF00989 PAS fold Chro_5919 PF00512 His Kinase A (phospho-acceptor) domain Chro_5921 PF00072 Response regulator receiver domain Chro_5921 PF00486 Transcriptional regulatory protein, C terminal Chro_5922 PF00672 HAMP domain Chro_5922 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5922 PF00512 His Kinase A (phospho-acceptor) domain Chro_5924 PF07731 Multicopper oxidase Chro_5924 PF07732 Multicopper oxidase Chro_5926 PF16916 Dimerisation domain of Zinc Transporter Chro_5926 PF01545 Cation efflux family Chro_5928 PF03706 Lysylphosphatidylglycerol synthase TM region Chro_5930 PF03706 Lysylphosphatidylglycerol synthase TM region Chro_5930 PF09924 Uncharacterised conserved protein (DUF2156) Chro_5935 PF13520 Amino acid permease Chro_5936 PF07690 Major Facilitator Superfamily Chro_5937 PF13533 Biotin-lipoyl like Chro_5938 PF17938 Tetracyclin repressor-like, C-terminal domain Chro_5938 PF00440 Bacterial regulatory proteins, tetR family Chro_5941 PF04545 Sigma-70, region 4 Chro_5941 PF00140 Sigma-70 factor, region 1.2 Chro_5941 PF04539 Sigma-70 region 3 Chro_5941 PF04542 Sigma-70 region 2 Chro_5945 PF00144 Beta-lactamase Chro_5946 PF08245 Mur ligase middle domain Chro_5951 PF00149 Calcineurin-like phosphoesterase Chro_5955 PF07244 Surface antigen variable number repeat Chro_5955 PF01103 Surface antigen Chro_5957 PF00005 ABC transporter Chro_5961 PF04072 Leucine carboxyl methyltransferase Chro_5962 PF13340 Putative transposase of IS4/5 family (DUF4096) Chro_5964 PF16736 Single Cache-like Chro_5964 PF00512 His Kinase A (phospho-acceptor) domain Chro_5964 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Chro_5964 PF00989 PAS fold Chro_5966 PF01925 Sulfite exporter TauE/SafE Chro_5970 PF13546 DDE superfamily endonuclease Chro_5975 PF01169 Uncharacterized protein family UPF0016 Chro_5978 PF01446 Replication protein