LOCUS       MH617709                1826 bp    DNA     circular ENV 05-AUG-2018
DEFINITION  Circoviridae sp. isolate ctcb578, complete genome.
ACCESSION   MH617709
VERSION     MH617709.1
DBLINK      BioProject: PRJNA393166
            BioSample: SAMN09074539
            Sequence Read Archive: SRR7122366
KEYWORDS    ENV.
SOURCE      Circoviridae sp. (animal metagenome)
  ORGANISM  Circoviridae sp.
            Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A.
  TITLE     Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer
            Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United
            States of America
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.11.0
            Genome Coverage       :: 6.974261x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Circoviridae sp."
                     /mol_type="genomic DNA"
                     /isolate="ctcb578"
                     /isolation_source="red snapper tissue"
                     /db_xref="taxon:1954248"
                     /environmental_sample
                     /country="USA"
                     /collection_date="01-Jun-2017"
                     /note="genome binned from sequencing reads available in
                     SRX4043880;
                     metagenomic; derived from metagenome: animal metagenome"
     CDS             1..864
                     /inference="similar to AA sequence:INSD:GAC77869.1"
                     /codon_start=1
                     /product="replication protein"
                     /protein_id="AXH77906.1"
                     /translation="MTSSNACYTYDFVYSAERFESENALLTLFKGLCKKYVFQLEQGE
                     SSGYLHYQGRLSLIKKVRPDKVLKIFKEKFRPNWIKPTVKNQHNEFVNKGDAFYQMKE
                     QTRLKGPWCDKDEVIYIPRQIREVKQLRPFQQTIIDSADNWDTRNINLVYCPEGNKGK
                     SILVGYCRAYKIGRALPPVNDFKDMMRMVCDMPTAKMYLVDMPRSLNKDRLYQFYSGI
                     ETIKDGYAYDDRYKFKEKFFDCPNIWIFSNILPDMSMLSKDRWKLWSIDKEYELKAIK
                     EDDLVTLHIMA"
     CDS             1009..1680
                     /inference="similar to AA sequence:INSD:AJP36488.1"
                     /codon_start=1
                     /product="putative capsid protein"
                     /protein_id="AXH77907.1"
                     /translation="MPPKRYKKKDAKQDKRIKALENMVLKTMENKQINYKNVNLAISS
                     SGVPDSQFLQVGVGAEDGDVQGDPARIGNSVTLYKQQYRFNFVGLNPDDLTGDRWNQI
                     RVIIAEALDGNQSILLADVLQYPSYFTNNNLVFTSPYTTKTTTNRRYKIHMDKTFELN
                     ATAKGATKVIKHDVTWKNGKVIEFDALSSIPTNHNMSIMFISDSGAVQHPTVSYAVRS
                     TFKDA"
ORIGIN      
        1 atgacaagta gtaatgcttg ctacacctat gatttcgtat atagtgcgga gcgatttgag
       61 agcgaaaatg ctttgcttac attatttaag ggattatgta aaaagtatgt ctttcaactg
      121 gaacaagggg aaagttctgg gtatttacac tatcaaggtc gtttatcctt gataaaaaaa
      181 gtgagaccag acaaagtttt aaaaattttt aaggaaaagt ttagaccaaa ttggattaaa
      241 ccaaccgtga agaatcaaca caacgaattt gttaataaag gtgacgcctt ttatcaaatg
      301 aaagagcaaa caaggttaaa aggaccttgg tgcgataaag atgaggttat ttatatacct
      361 cgtcaaatac gagaagtaaa acagttaaga ccctttcagc aaactattat agatagtgct
      421 gacaactggg atactcgtaa tattaatctg gtgtattgtc cagagggtaa taagggtaaa
      481 agtattttag taggttattg tcgcgcttat aagataggtc gcgctttacc gcccgtaaat
      541 gatttcaaag atatgatgag aatggtatgt gatatgccaa ccgctaaaat gtatttagta
      601 gatatgccac gttctttaaa taaagaccgt ttatatcaat tttatagcgg aatagaaacc
      661 attaaagatg gttatgctta tgatgataga tataagttca aagagaagtt ttttgactgt
      721 cctaatattt ggattttctc caatatatta ccagatatgt caatgttaag taaagaccgc
      781 tggaaactgt ggtctattga taaagaatat gaattaaaag caataaagga agacgattta
      841 gtgaccttgc acataatggc gtagcacttc tggtacccgc gttagcggta aaaagcgaga
      901 cggtgtgaaa tgaattagga ttgtaggtgg aagcaccttg gtgctccccg tgggtgacct
      961 agattgtaat gaaacctccg tgagtattat aatattacta ttatatatat gccccctaaa
     1021 aggtataaaa aaaaagatgc aaagcaagat aaacgcatta aagcgttgga aaatatggtc
     1081 ttaaagacta tggagaataa acaaattaat tacaaaaatg ttaatttagc aattagttct
     1141 tctggtgttc cagacagtca attcctacaa gtaggagttg gtgctgagga tggagatgtt
     1201 caaggagacc cagcacgtat aggtaactcg gttacattat acaaacaaca atatagattt
     1261 aatttcgtgg gattaaatcc agatgattta actggtgata gatggaatca aattagagtg
     1321 ataatcgcag aagcgttaga tggtaatcaa tcaatattat tagcggacgt tctgcaatac
     1381 ccaagttatt ttacaaataa caatttagta tttactagtc cttatactac taagactaca
     1441 accaatcgta gatataaaat tcatatggat aaaacatttg aattgaatgc gactgcaaaa
     1501 ggcgctacaa aagttattaa acacgatgta acgtggaaaa acggaaaggt tatagaattt
     1561 gacgctctgt catctatacc aacaaaccac aatatgtcaa ttatgtttat tagtgatagt
     1621 ggtgcggtac aacatccaac agtttcgtat gctgtgagaa gtacatttaa agatgcctaa
     1681 gttatttagg aaaagttgtg ccaattgtgc caacaagtta aaagatatat atataaagtt
     1741 aattgatttg attacaagaa ctcgcttctg tctttcaatt aacactgcgt ttaaattcat
     1801 tattatataa tatatagata tattat
//