LOCUS MH617426 2460 bp DNA circular ENV 05-AUG-2018 DEFINITION Circoviridae sp. isolate ctdc268, complete genome. ACCESSION MH617426 VERSION MH617426.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074539 Sequence Read Archive: SRR7122366 KEYWORDS ENV. SOURCE Circoviridae sp. (animal metagenome) ORGANISM Circoviridae sp. Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae. REFERENCE 1 (bases 1 to 2460) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 2460) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United States of America COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 5.261382x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..2460 /organism="Circoviridae sp." /mol_type="genomic DNA" /isolate="ctdc268" /isolation_source="red snapper tissue" /db_xref="taxon:1954248" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043880; metagenomic; derived from metagenome: animal metagenome" CDS 1..747 /note="No HHBLITS hits" /codon_start=1 /product="putative replicase" /protein_id="AXH76633.1" /translation="MSYPYQEFIGLKHRCQHRLGLYETYTTDYDTECIGGCKCGDHWN EIFENKPTAEETEAWAEAFYIKGLQATQIAEDRRRALFAGKQEAAQIITLSFDKAATN VIELMDQALAEIQKANYAWLDIDAIYAYEFYSDESKHKPENPHCHIATKRMVDKKGKP YKATNIAQQLRRKFGEDSKTPIRAIYRVNGEERTWKVAKSYVDGSCASKSPGTIDNGW QDGDKWRYTKQDIVYRAEHGVQHPMDFKAN" CDS 825..1859 /inference="similar to AA sequence:INSD:APA62656.1" /codon_start=1 /product="putative capsid protein" /protein_id="AXH76634.1" /translation="MPKTKTPRGLNKKEKREVKTLAKSVITSVVEKKYMNTNPAYNVT PLLSKPTSRVSVLAFSNTINTVGSGLQAITLNYGIDGPDPVADAVEMRELKMLRPFTS TTGNQQLDNYAIEGRECMPVSASCKWRLSRDIGKLTSGLDTPDWYDNLGAPNGLQHNL PIICRMVRVTPRLLQTNITCNPEEDLFLNEYNNATGVQISSFDDLELLTYRINKRRYE VIEDKFFRIQNGLTVSYQRSLYADPPSEGSGSGAMLQPFISNTNANCEKVLTTSHRVT QTKGKPVFYDVPDGSALQTATAGAKREYILFHYIYAGAETYLDNVGVTDKAPTDLKLS ALPMVKFTDA" ORIGIN 1 atgagttatc cttatcaaga attcataggc ctaaaacatc gatgccagca tcgcctggga 61 ttgtatgaga catatacaac cgactacgat acagaatgta ttggaggctg taaatgtggc 121 gaccattgga atgaaatctt tgaaaataag cccaccgcgg aagaaaccga agcatgggcg 181 gaagccttct atattaaggg acttcaggca acccaaattg ctgaagaccg aaggcgcgca 241 ttgtttgccg gtaaacaaga agcggcgcaa attataacgt taagttttga taaagccgcc 301 acgaatgtaa ttgagttaat ggaccaagca ttggccgaaa tccagaaagc aaattatgca 361 tggttggata ttgacgcgat ttatgcgtat gagttttact cagacgaaag caagcacaaa 421 cctgaaaatc cgcactgcca tatagctact aagcgtatgg tagataagaa agggaagccg 481 tataaggcaa ccaatatagc gcaacagtta aggcgaaaat tcggtgaaga cagtaagacg 541 cctataagag ccatttaccg cgtaaatggc gaggagcgca cttggaaagt agctaagagt 601 tatgtagatg gctcgtgtgc gtccaaaagc cctggcacca tcgacaacgg atggcaagat 661 ggtgacaaat ggagatatac caagcaagat atagtatatc gcgcagagca tggagttcaa 721 cacccaatgg actttaaggc aaattgaccc cagggaccga aggggcccga gagtaagatt 781 tccttttcaa ctacactata attattgtat aatcaattat tataatgcct aaaaccaaaa 841 ccccccgagg acttaacaag aaggaaaaga gggaagttaa gacgctcgct aagagtgtta 901 ttacctccgt tgtagaaaag aagtatatga ataccaatcc tgcttataat gtgaccccgc 961 tactatctaa accgacttct cgtgttagtg tgctagcgtt ctccaacact attaatactg 1021 ttggttcggg acttcaagcc ataaccttaa attatggtat tgatggtcct gaccctgttg 1081 ctgatgctgt ggaaatgagg gagttaaaaa tgcttcggcc ttttacttcc accacaggaa 1141 atcaacaatt agacaactac gcgattgaag gtcgcgaatg tatgcctgtc tcagcctcgt 1201 gtaagtggcg actgtctcgt gacatcggca aacttacctc aggtctagac actcccgatt 1261 ggtatgacaa tcttggcgcg ccaaatgggc tacagcataa tcttcctatt atctgtagaa 1321 tggttcgggt taccccgaga ctacttcaga caaatataac ctgtaaccca gaggaggatt 1381 tatttttgaa tgaatacaat aatgctactg gcgttcaaat cagttcgttt gatgatttag 1441 aactcctaac atatcgtatt aataaacgcc gttacgaagt aatcgaggat aagtttttta 1501 gaatacaaaa cggcctgact gtatcgtatc agcgtagcct atatgctgac ccgccgagcg 1561 aaggctcggg aagtggtgct atgttacagc cgtttatcag taatacgaat gctaattgcg 1621 agaaagtatt aactacttcg catagagtta cacaaactaa gggtaagcca gtcttctatg 1681 atgttcctga tggttcagcg ctacaaactg cgacggcagg agctaaacgc gagtatatat 1741 tatttcatta tatatacgct ggtgctgaaa cttatctcga caacgtaggt gtcacggata 1801 aggccccaac agatttaaaa ttgtcagcat taccaatggt aaaatttacc gatgcttaaa 1861 aagccacata atgcccgttt tggaagggta ttacacacaa aaaaatcaca aaaacatcat 1921 atttgaacta ttttaaatat tatgtgctaa gtcaatcata gtttgaaaat aagcattttc 1981 actaaccgca ttgactgaaa aaagagcact agccccaaac atcaatgttt atatttatgg 2041 accccgaccg agggttgggg agcggaagca tccccgtgtg ggtctgctct cttagaaggg 2101 tcccctgagt ttattccgtc catacacgcc gtccattacg gtgtggggga ggggacccgc 2161 accgttatgt atggcgtata ttgagggact agtttgaggg tatttgtctg agaaggcaat 2221 acccctacta tgtgtaaaat atatgtaaaa aaaacggtaa aaaaattcga aaaatttaaa 2281 aagggggtag ttgaggtagt tccacacgtg cgcgggctaa taaccttgtc agcccgccag 2341 gaccacaccc taaaaggtgt gggcctgccc ccccaaaaaa ccgaaattaa cactcagtca 2401 caatagttat tgggtattta tgaggtagtt atcgatattt ataatagttg agtattatat //