LOCUS MH617009 2415 bp DNA circular ENV 05-AUG-2018 DEFINITION Circoviridae sp. isolate ctga296, complete genome. ACCESSION MH617009 VERSION MH617009.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074539 Sequence Read Archive: SRR7122366 KEYWORDS ENV. SOURCE Circoviridae sp. (animal metagenome) ORGANISM Circoviridae sp. Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae. REFERENCE 1 (bases 1 to 2415) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 2415) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 28.685300x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..2415 /organism="Circoviridae sp." /mol_type="genomic DNA" /isolate="ctga296" /isolation_source="red snapper tissue" /db_xref="taxon:1954248" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043880; metagenomic; derived from metagenome: animal metagenome" CDS 1..1149 /inference="protein motif:CDD:280553" /codon_start=1 /product="putative viral replication protein" /protein_id="AXH74730.1" /translation="MSQFRAWMFTLNNPQPEELPLTWEGVKFISFQKEVGEEGTPHYQ GYLIMASPKRLAGMKKLNGRANFQPRNGTHEQALEYVNKLETRVEGPWTQGTPPEQGK RNDLTLALLDVKAGCSELELAEKYGGTWCRNYRSFREYSLLIKPDRTQKTIITVLYGE TGTGKSRYCSENYPGAYWKSQNLWWDNYNGEDVILDEFYGWLPYSFLLRLFDRNPLLV ERKGGSIKFTSRRILCTSNKDPETWYPNQDYSPLRRRLENVIYIDLQGNSHSKCGSLE FPFNGTISPSYETSKGVLRTSSMPRESSRIDSGTDSLGSSPSLPGTPPLPDAESVDFG SRSRLITGDTYFPNLRVPLLLKPSPLSRSPVPDSDDHERRKLFISKLV" CDS 473..1240 /note="No HHBLITS hits" /codon_start=1 /product="hypothetical protein" /protein_id="AXH74728.1" /translation="MERRELGSLAIAVKTIQELTGNLRTYGGITITVKTSSWTSSMDG SLTPSSFDCSIEIPFSSKEKVDPSSSRAGGYSAPLIRTPKLGTQTKTIPPFVVASKML STSTSKETPIQSVDLSNSPSMEQSPPPMKRAKAFSEHLLCHENLQESIPELTLLDPLP PFRGPPLFPMLNQSTLGQGQGSSLEIPTSQISESHSSLNPPLYPDLPSPTPMITKGES YSYQNSCEDFCPECFCLYHECVCNGLEDDEMCFSDSE" CDS 1304..2044 /inference="protein motif:CDD:146498" /note="Satellite tobacco necrosis virus coat protein" /codon_start=1 /product="coat protein" /protein_id="AXH74731.1" /translation="MRKRSRSFTSDYPKNKKQRLFAGPNPTYMGTHIPLRLRGKVRFG GNYGKASAGELKFHDVQVLAPNVSPAAGYAWPSLNVIPQGDGQSERNGRKIVVRKISM RGSFDSAIQEINTTRMRLIVALDKQCNGAAASVDTLLTSADIDSFRNLDNSPRFKVLL DKNVDLQPNTNHTVSTATGITSQTCSIHKTFKWNKNVNIPIIYDSSLATGVLSTIRSN NLFCVVLAETVAANADFFCVCRLRYYDN" CDS 1443..2048 /note="No HHBLITS hits" /codon_start=1 /product="hypothetical protein" /protein_id="AXH74729.1" /translation="MVRLLLENSSFMMFKFLLPMFPLLRGMLGLLSMSFLRVMVKVKG MGEKLLFERSQCVVLLILLFKRLIQLECALLWLLTNSVMVLLPLLILSLQVQILTPSG ISIIPLGSKFSLIKMWISSPTQIILSQLQLESPLKLVLFIKPSSGTKMSISPSSMIPL LPLESFPLFVVTISSVLFLLRLWPPMPISSVSVVFDTMIIK" ORIGIN 1 atgtctcaat tccgtgcctg gatgttcacc ctgaacaatc ctcaacccga ggaacttcct 61 ctcacctggg aaggagtgaa attcatctcc tttcaaaagg aggtgggtga ggagggaact 121 cctcactatc aaggatacct catcatggcc tctccaaaga gacttgctgg tatgaaaaaa 181 ctgaatggaa gggcaaactt ccagccaaga aatggtactc atgaacaagc cctggagtat 241 gtcaacaagc ttgaaactcg agtagagggt ccctggacac aggggacccc tcctgaacaa 301 gggaagagaa acgatctcac tctggccctt ctggatgtca aagctgggtg ctcagaactg 361 gagcttgccg aaaagtatgg tggcacatgg tgtcgaaact atcgttcatt tagagaatat 421 tcattactaa taaaacctga tcgtactcaa aagactatca tcaccgttct ttatggagag 481 acgggaactg ggaagtctcg ctattgcagt gaaaactatc caggagctta ctggaaatct 541 cagaacctat ggtgggataa ctataacggt gaagacgtca tcttggacga gttctatgga 601 tggctccctt actccttcct ccttcgactg ttcgatcgaa atccccttct cgtcgaaaga 661 aaaggtggat ccatcaagtt cacgagcagg aggatactct gcacctctaa taaggacccc 721 gaaacttggt acccaaacca agactattcc ccccttcgtc gtcgcctcga aaatgttatc 781 tacatcgacc tccaaggaaa ctcccattca aagtgtggat ctctcgaatt ccccttcaat 841 ggaacaatct ccccctccta tgaaacgagc aaaggcgttc tcagaacatc ttctatgcca 901 cgagaatctt caagaatcga ttccggaact gactctcttg gatcctctcc ctcccttccg 961 gggacccccc ctcttcccga tgctgaatca gtcgactttg ggtcaaggtc aaggctcatc 1021 actggagata cctacttccc aaatctcaga gtcccactcc tccttaaacc ctcccctcta 1081 tcccgatctc ccgtccccga ctccgatgat cacgaaaggc gaaagctatt catatcaaaa 1141 ctcgtgtgag gacttctgtc ctgaatgctt ctgtctctat catgagtgtg tctgtaatgg 1201 cctggaagat gatgaaatgt gtttctcaga ctcagaataa aaaatttccc ctttaaaaac 1261 atgacttttt tttgtctcaa ataaacattt ctcaaaactc aaaatgcgta aacggtccag 1321 atccttcacc tcagattatc caaaaaacaa gaaacagcgt ctctttgctg gtcccaatcc 1381 cacttacatg ggaactcata tcccccttcg tctccgtggt aaggttcgat ttggtggaaa 1441 ttatggtaag gcttctgctg gagaactcaa gtttcatgat gttcaagttc ttgctcccaa 1501 tgtttcccct gctgcggggt atgcttggcc ttctctcaat gtcattcctc agggtgatgg 1561 tcaaagtgaa aggaatggga gaaaaattgt tgttcgaaag atctcaatgc gtggttcttt 1621 tgattctgct attcaagaga ttaatacaac tcgaatgcgc cttattgtgg ctcttgacaa 1681 acagtgtaat ggtgctgctg cctctgttga tactctcctt acaagtgcag atattgactc 1741 cttcaggaat ctcgataatt cccctcggtt caaagttctc cttgataaaa atgtggatct 1801 ccagcccaac acaaatcata ctgtctcaac tgcaactgga atcacctctc aaacttgttc 1861 tattcataaa accttcaagt ggaacaaaaa tgtcaatatc cccatcatct atgattcctc 1921 tcttgccact ggagtccttt ccactattcg tagtaacaat ctcttctgtg ttgttcttgc 1981 tgagactgtg gccgccaatg ccgatttctt ctgtgtctgt cgtcttcgat actatgataa 2041 ttaaataaac cttgattcaa aaaaaataaa ttttatcttt taagagtagg aggattcgcc 2101 ccggatccga cggatcagac taatactttg agccctcgtg ggcgaactac aataatagaa 2161 agaagcttga tccatcagcc agccgcaggc gttaaaaaaa ccctatgcca aaaaaaaaac 2221 cctaatgggc acgaagtgcc agcccgagcc ggcgaggctc ccaatcggga attcctggaa 2281 gtgtttctaa gaaacgcgtc aacatcggga acgaagtgtt cctcaggaac gtactgtaaa 2341 agcaaatata aaaggggggt cagacgaagt ctatagtatt acccccctca acttccgtcc 2401 caaacctctg tccca //