LOCUS       MH618177                1857 bp    DNA     circular ENV 05-AUG-2018
DEFINITION  Circular genetic element sp. isolate ctjc279, complete sequence.
ACCESSION   MH618177
VERSION     MH618177.1
DBLINK      BioProject: PRJNA393166
            BioSample: SAMN07319269
            Sequence Read Archive: SRR5832142
KEYWORDS    ENV.
SOURCE      Circular genetic element sp. (animal metagenome)
  ORGANISM  Circular genetic element sp.
            unclassified sequences.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A.
  TITLE     Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer
            Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United
            States of America
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.11.0
            Genome Coverage       :: 37.0722x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Circular genetic element sp."
                     /mol_type="genomic DNA"
                     /isolate="ctjc279"
                     /isolation_source="haddock tissue"
                     /db_xref="taxon:2202954"
                     /environmental_sample
                     /country="USA"
                     /collection_date="01-Jun-2017"
                     /metagenome_source="animal metagenome"
                     /note="closest relative: No homologues found;
                     metagenomic"
     CDS             1..288
                     /inference="similar to AA sequence:UniProtKB:W5YRL0_9ALTE"
                     /codon_start=1
                     /product="CopG family transcriptional regulator"
                     /protein_id="AXH79516.1"
                     /translation="MVKNKTQRVTLSLPASVVSDLDCISAALGVSRSAFVSASFAEML
                     PPLIPLVKIASPDSSEADSRRYRGEFIQQLNESISRLNSGFEGLQDDLFKE"
     CDS             269..1162
                     /inference="similar to AA
                     sequence:UniProtKB:A0A089QJH3_9LACO"
                     /codon_start=1
                     /product="replication initiation factor family protein"
                     /protein_id="AXH79517.1"
                     /translation="MICSRSDVFCDWLDVTCHPEASFLPLLESFLAFHFYPVLFSEAG
                     RIAYRVGTGVLTLDSKRLFHRASASGSCIRDFESKGIFRDYVNTLGSVGHNITRLDAA
                     VDIFTDAPPFLRGLEAQYPDDLFSFGRKALRVSRLYSARALDRALTGTWYAGHRSSAR
                     VTARVYDKQAEALEKRGEILPPTTRIELTFRKDYNCSLYDVLMPKSLFYTHASPRLLN
                     APEGELIPEWSPKGLVPWVSTPVDYTLTLERFDYRVSSSPELLKLAELGAQFGDTGKA
                     VVMRHFERLLTSAINASGEAD"
     CDS             1228..1479
                     /note="No HHBLITS hits"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="AXH79518.1"
                     /translation="MSNFDFTLERAHLLIDNAEQLSLALIMLHNQGLPPELLNTISLS
                     LLEKLNSDLQDASLVISVNSYQGGMGEAPMRDALEPLSC"
ORIGIN      
        1 atggttaaaa ataaaactca acgggtaacg cttagtcttc ctgcatccgt ggtttcagat
       61 ttggattgta tctctgctgc tttgggtgtt tctcgctctg cgttcgttag cgcctctttt
      121 gctgagatgc tacccccgct aatacctttg gttaaaattg ctagccctga ctcctctgag
      181 gctgattcac ggcgttatcg tggtgagttc attcagcagt tgaatgaatc tatctcgcgc
      241 ttaaattctg gctttgaggg acttcaggat gatttgttca aggagtgatg ttttctgtga
      301 ttggctagat gttacttgcc atcctgaggc tagcttcttg cctctcttgg agtctttcct
      361 agccttccac ttttaccccg tccttttctc tgaggctggt aggattgctt acagggttgg
      421 tactggggtt ctcacgcttg actctaagcg tttatttcac cgtgcaagtg cttctggctc
      481 ctgcattcgt gattttgagt ctaagggcat attcagggac tatgtgaaca ctcttggctc
      541 tgttggccat aacatcacta ggcttgatgc tgctgttgat atctttactg atgcacctcc
      601 ctttcttcgg ggcttagagg ctcaatatcc tgatgatctc ttcagctttg ggcgtaaggc
      661 tttacgcgtc tctagacttt actctgctcg tgctcttgat agggctctta ctggtacttg
      721 gtatgctggt caccgtagtt ctgctcgtgt tactgctcgc gtttatgaca agcaagctga
      781 ggcccttgag aaacgtggtg aaatcctacc tccaactact cgtattgagc taacattcag
      841 gaaagattac aactgctctc tatatgacgt ccttatgcct aagtctcttt tttacacaca
      901 tgcaagccct aggctactta acgcccctga gggcgagctt atacccgagt ggagtcctaa
      961 gggtttagtt ccttgggttt ctacccctgt tgattacact ctcactcttg agcgttttga
     1021 ttatcgtgtt tctagttcgc ctgaactctt gaaactcgct gagcttggcg ctcaatttgg
     1081 cgacactggt aaagctgtcg ttatgagaca ctttgagcgt ttactcacaa gtgctattaa
     1141 tgcctctggc gaggctgatt gattcgccag ggaacaaagc gccaactttg tccctagcta
     1201 aacacaacta actgaacgga gttaattatg tctaattttg attttacctt agaacgtgct
     1261 cacctactta tagataacgc tgaacagctt tctttagctt tgattatgtt acacaatcaa
     1321 ggtctgcctc ctgagcttct aaacactatt tccctttctt tgcttgaaaa gcttaattct
     1381 gatttgcagg atgctagcct tgtgatttct gtaaacagtt atcaaggggg tatgggggaa
     1441 gcccccatgc gtgacgctct tgagcccttg tcctgctagg cgcttttaac ttctcaatac
     1501 ctatctagtg tgatgacctt aacggccgta ggcaaaacca gcttacaggc cgttcttttt
     1561 tagttccgat aataactctt atcaaaagta accttgctta gttctcccac gtctttttag
     1621 ggcaggggca actcctctgg cccgtgaggg gtttgaggag tgcccctgct ttgaatagtc
     1681 gctatggtaa taccgactat tcgttttacc ctttgaccat ttatttttct taacctattg
     1741 aaagcacgcc cttaaacctg ctttttgcct tttcttgtta tatttagttc acacctattg
     1801 taattctttt agttcatacc tatactgctc ttagttcata cctataaggg ctttcgc
//