locus-tag class description CPR_0001 PF00308 Bacterial dnaA protein CPR_0001 PF08299 Bacterial dnaA protein helix-turn-helix CPR_0001 PF11638 DnaA N-terminal domain CPR_0002 PF02767 DNA polymerase III beta subunit, central domain CPR_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain CPR_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain CPR_0004 PF02463 RecF/RecN/SMC N terminal domain CPR_0006 PF00986 DNA gyrase B subunit, carboxyl terminus CPR_0006 PF01751 Toprim domain CPR_0006 PF00204 DNA gyrase B CPR_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0007 PF00521 DNA gyrase/topoisomerase IV, subunit A CPR_0007 PF03989 DNA gyrase C-terminal domain, beta-propeller CPR_0010 PF01966 HD domain CPR_0011 PF03699 Uncharacterised protein family (UPF0182) CPR_0012 PF01266 FAD dependent oxidoreductase CPR_0014 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPR_0014 PF02403 Seryl-tRNA synthetase N-terminal domain CPR_0024 PF12705 PD-(D/E)XK nuclease superfamily CPR_0025 PF00580 UvrD/REP helicase N-terminal domain CPR_0025 PF13361 UvrD-like helicase C-terminal domain CPR_0025 PF12705 PD-(D/E)XK nuclease superfamily CPR_0026 PF01743 Poly A polymerase head domain CPR_0026 PF12627 Probable RNA and SrmB- binding site of polymerase A CPR_0026 PF13735 tRNA nucleotidyltransferase domain 2 putative CPR_0027 PF01966 HD domain CPR_0028 PF03734 L,D-transpeptidase catalytic domain CPR_0029 PF07687 Peptidase dimerisation domain CPR_0029 PF01546 Peptidase family M20/M25/M40 CPR_0030 PF02645 Uncharacterised protein, DegV family COG1307 CPR_0033 PF02666 Phosphatidylserine decarboxylase CPR_0034 PF00440 Bacterial regulatory proteins, tetR family CPR_0036 PF03471 Transporter associated domain CPR_0036 PF01595 Cyclin M transmembrane N-terminal domain CPR_0036 PF00571 CBS domain CPR_0037 PF14437 MafB19-like deaminase CPR_0040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CPR_0041 PF00882 Zinc dependent phospholipase C CPR_0041 PF01477 PLAT/LH2 domain CPR_0042 PF07683 Cobalamin synthesis protein cobW C-terminal domain CPR_0042 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPR_0044 PF03773 Predicted permease CPR_0046 PF01790 Prolipoprotein diacylglyceryl transferase CPR_0049 PF05525 Branched-chain amino acid transport protein CPR_0053 PF00005 ABC transporter CPR_0054 PF00186 Dihydrofolate reductase CPR_0055 PF12169 DNA polymerase III subunits gamma and tau domain III CPR_0056 PF02575 YbaB/EbfC DNA-binding family CPR_0057 PF13662 Toprim domain CPR_0057 PF02132 RecR protein CPR_0063 PF00266 Aminotransferase class-V CPR_0064 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPR_0064 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPR_0066 PF01048 Phosphorylase superfamily CPR_0067 PF00899 ThiF family CPR_0069 PF13302 Acetyltransferase (GNAT) domain CPR_0070 PF01712 Deoxynucleoside kinase CPR_0076 PF03618 Kinase/pyrophosphorylase CPR_0079 PF13520 Amino acid permease CPR_0081 PF00128 Alpha amylase, catalytic domain CPR_0081 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPR_0081 PF02806 Alpha amylase, C-terminal all-beta domain CPR_0082 PF08323 Starch synthase catalytic domain CPR_0082 PF00534 Glycosyl transferases group 1 CPR_0083 PF00343 Carbohydrate phosphorylase CPR_0084 PF00686 Starch binding domain CPR_0084 PF00128 Alpha amylase, catalytic domain CPR_0084 PF02903 Alpha amylase, N-terminal ig-like domain CPR_0086 PF00483 Nucleotidyl transferase CPR_0087 PF00483 Nucleotidyl transferase CPR_0089 PF13396 Phospholipase_D-nuclease N-terminal CPR_0089 PF13091 PLD-like domain CPR_0091 PF00874 PRD domain CPR_0091 PF03123 CAT RNA binding domain CPR_0092 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPR_0093 PF02378 Phosphotransferase system, EIIC CPR_0093 PF00367 phosphotransferase system, EIIB CPR_0094 PF17932 Tetracyclin repressor-like, C-terminal domain CPR_0094 PF00440 Bacterial regulatory proteins, tetR family CPR_0096 PF03764 Elongation factor G, domain IV CPR_0096 PF03144 Elongation factor Tu domain 2 CPR_0096 PF00009 Elongation factor Tu GTP binding domain CPR_0096 PF14492 Elongation Factor G, domain II CPR_0096 PF00679 Elongation factor G C-terminus CPR_0098 PF00480 ROK family CPR_0099 PF02915 Rubrerythrin CPR_0100 PF00300 Histidine phosphatase superfamily (branch 1) CPR_0102 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPR_0102 PF00056 lactate/malate dehydrogenase, NAD binding domain CPR_0106 PF01926 50S ribosome-binding GTPase CPR_0106 PF12631 MnmE helical domain CPR_0106 PF10396 GTP-binding protein TrmE N-terminus CPR_0108 PF06968 Biotin and Thiamin Synthesis associated domain CPR_0108 PF04055 Radical SAM superfamily CPR_0110 PF06207 Protein of unknown function (DUF1002) CPR_0113 PF01520 N-acetylmuramoyl-L-alanine amidase CPR_0113 PF08239 Bacterial SH3 domain CPR_0117 PF00486 Transcriptional regulatory protein, C terminal CPR_0117 PF00072 Response regulator receiver domain CPR_0118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0119 PF00005 ABC transporter CPR_0126 PF01385 Probable transposase CPR_0126 PF12323 Helix-turn-helix domain CPR_0126 PF07282 Putative transposase DNA-binding domain CPR_0128 PF02464 Competence-damaged protein CPR_0128 PF18146 Damage-inducible protein CinA KH domain CPR_0128 PF00994 Probable molybdopterin binding domain CPR_0132 PF02915 Rubrerythrin CPR_0136 PF00005 ABC transporter CPR_0136 PF12848 ABC transporter CPR_0137 PF02463 RecF/RecN/SMC N terminal domain CPR_0137 PF06470 SMC proteins Flexible Hinge Domain CPR_0140 PF03949 Malic enzyme, NAD binding domain CPR_0140 PF00390 Malic enzyme, N-terminal domain CPR_0142 PF03466 LysR substrate binding domain CPR_0142 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPR_0143 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CPR_0155 PF13520 Amino acid permease CPR_0156 PF08533 Beta-galactosidase C-terminal domain CPR_0156 PF08532 Beta-galactosidase trimerisation domain CPR_0156 PF02449 Beta-galactosidase CPR_0158 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPR_0158 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPR_0159 PF13520 Amino acid permease CPR_0160 PF00696 Amino acid kinase family CPR_0161 PF01316 Arginine repressor, DNA binding domain CPR_0161 PF02863 Arginine repressor, C-terminal domain CPR_0162 PF18496 Collagenase G catalytic helper subdomain CPR_0162 PF01752 Collagenase CPR_0162 PF08453 Peptidase family M9 N-terminal CPR_0163 PF01741 Large-conductance mechanosensitive channel, MscL CPR_0164 PF13847 Methyltransferase domain CPR_0165 PF01053 Cys/Met metabolism PLP-dependent enzyme CPR_0166 PF00291 Pyridoxal-phosphate dependent enzyme CPR_0167 PF02664 S-Ribosylhomocysteinase (LuxS) CPR_0168 PF01385 Probable transposase CPR_0168 PF07282 Putative transposase DNA-binding domain CPR_0168 PF12323 Helix-turn-helix domain CPR_0172 PF00005 ABC transporter CPR_0173 PF00881 Nitroreductase family CPR_0174 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CPR_0175 PF00701 Dihydrodipicolinate synthetase family CPR_0176 PF00474 Sodium:solute symporter family CPR_0177 PF04074 YhcH/YjgK/YiaL CPR_0178 PF00480 ROK family CPR_0179 PF01380 SIS domain CPR_0179 PF01418 Helix-turn-helix domain, rpiR family CPR_0182 PF01891 Cobalt uptake substrate-specific transmembrane region CPR_0183 PF02553 Cobalt transport protein component CbiN CPR_0184 PF02361 Cobalt transport protein CPR_0185 PF00005 ABC transporter CPR_0188 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CPR_0189 PF01551 Peptidase family M23 CPR_0193 PF02583 Metal-sensitive transcriptional repressor CPR_0195 PF08448 PAS fold CPR_0195 PF00512 His Kinase A (phospho-acceptor) domain CPR_0195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0195 PF00072 Response regulator receiver domain CPR_0195 PF13426 PAS domain CPR_0202 PF05552 Conserved TM helix CPR_0202 PF00924 Mechanosensitive ion channel CPR_0203 PF01126 Heme oxygenase CPR_0204 PF12320 Type 5 capsule protein repressor C-terminal domain CPR_0204 PF00149 Calcineurin-like phosphoesterase CPR_0205 PF13175 AAA ATPase domain CPR_0206 PF00871 Acetokinase family CPR_0207 PF05099 Tellurite resistance protein TerB CPR_0207 PF00226 DnaJ domain CPR_0212 PF01497 Periplasmic binding protein CPR_0213 PF01032 FecCD transport family CPR_0214 PF00005 ABC transporter CPR_0215 PF00664 ABC transporter transmembrane region CPR_0215 PF00005 ABC transporter CPR_0216 PF00664 ABC transporter transmembrane region CPR_0216 PF00005 ABC transporter CPR_0217 PF04304 Protein of unknown function (DUF454) CPR_0222 PF07690 Major Facilitator Superfamily CPR_0225 PF00512 His Kinase A (phospho-acceptor) domain CPR_0225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0225 PF16736 Single Cache-like CPR_0225 PF00989 PAS fold CPR_0226 PF00486 Transcriptional regulatory protein, C terminal CPR_0226 PF00072 Response regulator receiver domain CPR_0227 PF00999 Sodium/hydrogen exchanger family CPR_0235 PF13426 PAS domain CPR_0235 PF00990 Diguanylate cyclase, GGDEF domain CPR_0235 PF00563 EAL domain CPR_0236 PF00684 DnaJ central domain CPR_0236 PF01556 DnaJ C terminal domain CPR_0236 PF00226 DnaJ domain CPR_0238 PF00012 Hsp70 protein CPR_0245 PF07282 Putative transposase DNA-binding domain CPR_0245 PF01385 Probable transposase CPR_0245 PF12323 Helix-turn-helix domain CPR_0247 PF00924 Mechanosensitive ion channel CPR_0248 PF03932 CutC family CPR_0249 PF03167 Uracil DNA glycosylase superfamily CPR_0251 PF00578 AhpC/TSA family CPR_0255 PF08239 Bacterial SH3 domain CPR_0255 PF00005 ABC transporter CPR_0258 PF08239 Bacterial SH3 domain CPR_0258 PF00005 ABC transporter CPR_0260 PF13419 Haloacid dehalogenase-like hydrolase CPR_0265 PF08239 Bacterial SH3 domain CPR_0265 PF00877 NlpC/P60 family CPR_0265 PF01476 LysM domain CPR_0266 PF13847 Methyltransferase domain CPR_0266 PF17827 PrmC N-terminal domain CPR_0267 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPR_0268 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPR_0268 PF18277 AbrB C-terminal domain CPR_0271 PF03816 Cell envelope-related transcriptional attenuator domain CPR_0272 PF03631 Virulence factor BrkB CPR_0273 PF16363 GDP-mannose 4,6 dehydratase CPR_0274 PF00436 Single-strand binding protein family CPR_0275 PF00258 Flavodoxin CPR_0275 PF00753 Metallo-beta-lactamase superfamily CPR_0282 PF01648 4'-phosphopantetheinyl transferase superfamily CPR_0283 PF01256 Carbohydrate kinase CPR_0283 PF03853 YjeF-related protein N-terminus CPR_0286 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CPR_0287 PF00456 Transketolase, thiamine diphosphate binding domain CPR_0288 PF02780 Transketolase, C-terminal domain CPR_0288 PF02779 Transketolase, pyrimidine binding domain CPR_0290 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPR_0290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPR_0291 PF00005 ABC transporter CPR_0292 PF02687 FtsX-like permease family CPR_0292 PF18075 FtsX extracellular domain CPR_0293 PF01471 Putative peptidoglycan binding domain CPR_0293 PF03572 Peptidase family S41 CPR_0293 PF17820 PDZ domain CPR_0295 PF00271 Helicase conserved C-terminal domain CPR_0295 PF12344 Ultra-violet resistance protein B CPR_0295 PF02151 UvrB/uvrC motif CPR_0295 PF17757 UvrB interaction domain CPR_0295 PF04851 Type III restriction enzyme, res subunit CPR_0296 PF02645 Uncharacterised protein, DegV family COG1307 CPR_0297 PF00005 ABC transporter CPR_0299 PF07859 alpha/beta hydrolase fold CPR_0299 PF13472 GDSL-like Lipase/Acylhydrolase family CPR_0300 PF05190 MutS family domain IV CPR_0300 PF00488 MutS domain V CPR_0300 PF05192 MutS domain III CPR_0300 PF01624 MutS domain I CPR_0300 PF05188 MutS domain II CPR_0301 PF07729 FCD domain CPR_0301 PF00392 Bacterial regulatory proteins, gntR family CPR_0302 PF02652 L-lactate permease CPR_0303 PF01012 Electron transfer flavoprotein domain CPR_0304 PF01012 Electron transfer flavoprotein domain CPR_0304 PF00766 Electron transfer flavoprotein FAD-binding domain CPR_0305 PF01565 FAD binding domain CPR_0305 PF02913 FAD linked oxidases, C-terminal domain CPR_0308 PF10990 Protein of unknown function (DUF2809) CPR_0310 PF09335 SNARE associated Golgi protein CPR_0311 PF00690 Cation transporter/ATPase, N-terminus CPR_0311 PF00689 Cation transporting ATPase, C-terminus CPR_0313 PF00156 Phosphoribosyl transferase domain CPR_0314 PF13936 Helix-turn-helix domain CPR_0318 PF03412 Peptidase C39 family CPR_0318 PF00005 ABC transporter CPR_0318 PF00664 ABC transporter transmembrane region CPR_0319 PF00005 ABC transporter CPR_0319 PF00664 ABC transporter transmembrane region CPR_0319 PF03412 Peptidase C39 family CPR_0321 PF13936 Helix-turn-helix domain CPR_0325 PF01523 Putative modulator of DNA gyrase CPR_0326 PF01523 Putative modulator of DNA gyrase CPR_0327 PF00155 Aminotransferase class I and II CPR_0328 PF09382 RQC domain CPR_0328 PF16124 RecQ zinc-binding CPR_0328 PF00270 DEAD/DEAH box helicase CPR_0328 PF00271 Helicase conserved C-terminal domain CPR_0328 PF00570 HRDC domain CPR_0329 PF17755 UvrA DNA-binding domain CPR_0329 PF17760 UvrA interaction domain CPR_0330 PF16697 Inner membrane component of T3SS, cytoplasmic domain CPR_0331 PF01098 Cell cycle protein CPR_0332 PF00905 Penicillin binding protein transpeptidase domain CPR_0333 PF12826 Helix-hairpin-helix motif CPR_0333 PF01541 GIY-YIG catalytic domain CPR_0333 PF02151 UvrB/uvrC motif CPR_0333 PF08459 UvrC Helix-hairpin-helix N-terminal CPR_0334 PF01565 FAD binding domain CPR_0334 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPR_0335 PF03668 P-loop ATPase protein family CPR_0336 PF01933 Uncharacterised protein family UPF0052 CPR_0337 PF14527 WhiA LAGLIDADG-like domain CPR_0337 PF10298 WhiA N-terminal LAGLIDADG-like domain CPR_0337 PF02650 WhiA C-terminal HTH domain CPR_0339 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPR_0339 PF14579 Helix-hairpin-helix motif CPR_0339 PF02811 PHP domain CPR_0339 PF01336 OB-fold nucleic acid binding domain CPR_0339 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPR_0340 PF01336 OB-fold nucleic acid binding domain CPR_0340 PF14579 Helix-hairpin-helix motif CPR_0340 PF02811 PHP domain CPR_0340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPR_0340 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPR_0341 PF00365 Phosphofructokinase CPR_0342 PF02887 Pyruvate kinase, alpha/beta domain CPR_0342 PF00224 Pyruvate kinase, barrel domain CPR_0344 PF00106 short chain dehydrogenase CPR_0345 PF13091 PLD-like domain CPR_0347 PF00392 Bacterial regulatory proteins, gntR family CPR_0347 PF00155 Aminotransferase class I and II CPR_0348 PF01938 TRAM domain CPR_0348 PF05958 tRNA (Uracil-5-)-methyltransferase CPR_0358 PF13936 Helix-turn-helix domain CPR_0360 PF01204 Trehalase CPR_0362 PF06100 MCRA family CPR_0363 PF00005 ABC transporter CPR_0363 PF00664 ABC transporter transmembrane region CPR_0364 PF00664 ABC transporter transmembrane region CPR_0364 PF00005 ABC transporter CPR_0366 PF05105 Bacteriophage holin family CPR_0367 PF01522 Polysaccharide deacetylase CPR_0369 PF00392 Bacterial regulatory proteins, gntR family CPR_0369 PF07729 FCD domain CPR_0370 PF01048 Phosphorylase superfamily CPR_0371 PF01676 Metalloenzyme superfamily CPR_0372 PF13520 Amino acid permease CPR_0373 PF02329 Histidine carboxylase PI chain CPR_0376 PF02445 Quinolinate synthetase A protein CPR_0377 PF00890 FAD binding domain CPR_0378 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CPR_0378 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPR_0379 PF13936 Helix-turn-helix domain CPR_0381 PF03505 Clostridium enterotoxin CPR_0382 PF01797 Transposase IS200 like CPR_0383 PF13936 Helix-turn-helix domain CPR_0384 PF00860 Permease family CPR_0388 PF05525 Branched-chain amino acid transport protein CPR_0389 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPR_0389 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPR_0390 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CPR_0390 PF02278 Polysaccharide lyase family 8, super-sandwich domain CPR_0390 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CPR_0391 PF04962 KduI/IolB family CPR_0394 PF00294 pfkB family carbohydrate kinase CPR_0395 PF04962 KduI/IolB family CPR_0396 PF07470 Glycosyl Hydrolase Family 88 CPR_0397 PF03830 PTS system sorbose subfamily IIB component CPR_0399 PF03613 PTS system mannose/fructose/sorbose family IID component CPR_0403 PF00356 Bacterial regulatory proteins, lacI family CPR_0404 PF01565 FAD binding domain CPR_0404 PF08031 Berberine and berberine like CPR_0410 PF00484 Carbonic anhydrase CPR_0413 PF00183 Hsp90 protein CPR_0416 PF00356 Bacterial regulatory proteins, lacI family CPR_0416 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CPR_0417 PF00128 Alpha amylase, catalytic domain CPR_0417 PF16657 Maltogenic Amylase, C-terminal domain CPR_0418 PF02378 Phosphotransferase system, EIIC CPR_0418 PF00367 phosphotransferase system, EIIB CPR_0418 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPR_0419 PF03372 Endonuclease/Exonuclease/phosphatase family CPR_0420 PF03009 Glycerophosphoryl diester phosphodiesterase family CPR_0421 PF13361 UvrD-like helicase C-terminal domain CPR_0421 PF00580 UvrD/REP helicase N-terminal domain CPR_0422 PF02390 Putative methyltransferase CPR_0427 PF10502 Signal peptidase, peptidase S26 CPR_0433 PF03471 Transporter associated domain CPR_0433 PF01595 Cyclin M transmembrane N-terminal domain CPR_0433 PF00571 CBS domain CPR_0434 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPR_0434 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPR_0436 PF00392 Bacterial regulatory proteins, gntR family CPR_0437 PF00005 ABC transporter CPR_0440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPR_0441 PF12833 Helix-turn-helix domain CPR_0442 PF00465 Iron-containing alcohol dehydrogenase CPR_0444 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPR_0445 PF09278 MerR, DNA binding CPR_0445 PF00376 MerR family regulatory protein CPR_0448 PF00072 Response regulator receiver domain CPR_0448 PF00486 Transcriptional regulatory protein, C terminal CPR_0449 PF16736 Single Cache-like CPR_0449 PF00989 PAS fold CPR_0449 PF00512 His Kinase A (phospho-acceptor) domain CPR_0449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0452 PF13807 G-rich domain on putative tyrosine kinase CPR_0452 PF02706 Chain length determinant protein CPR_0453 PF13614 AAA domain CPR_0454 PF02397 Bacterial sugar transferase CPR_0456 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPR_0456 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPR_0456 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPR_0458 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPR_0459 PF13439 Glycosyltransferase Family 4 CPR_0459 PF00534 Glycosyl transferases group 1 CPR_0463 PF04991 LicD family CPR_0465 PF00483 Nucleotidyl transferase CPR_0468 PF16363 GDP-mannose 4,6 dehydratase CPR_0469 PF00483 Nucleotidyl transferase CPR_0472 PF12323 Helix-turn-helix domain CPR_0472 PF01385 Probable transposase CPR_0472 PF07282 Putative transposase DNA-binding domain CPR_0474 PF12833 Helix-turn-helix domain CPR_0474 PF02311 AraC-like ligand binding domain CPR_0475 PF16875 Glycosyl hydrolase family 36 N-terminal domain CPR_0475 PF16874 Glycosyl hydrolase family 36 C-terminal domain CPR_0476 PF01547 Bacterial extracellular solute-binding protein CPR_0477 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0478 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0479 PF04203 Sortase domain CPR_0486 PF04397 LytTr DNA-binding domain CPR_0486 PF00072 Response regulator receiver domain CPR_0489 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPR_0491 PF03611 PTS system sugar-specific permease component CPR_0493 PF01047 MarR family CPR_0494 PF00005 ABC transporter CPR_0494 PF00664 ABC transporter transmembrane region CPR_0495 PF00005 ABC transporter CPR_0495 PF00664 ABC transporter transmembrane region CPR_0499 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPR_0499 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPR_0500 PF17203 Single cache domain 3 CPR_0500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0500 PF00989 PAS fold CPR_0500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CPR_0501 PF00072 Response regulator receiver domain CPR_0503 PF02659 Putative manganese efflux pump CPR_0506 PF12323 Helix-turn-helix domain CPR_0506 PF07282 Putative transposase DNA-binding domain CPR_0506 PF01385 Probable transposase CPR_0507 PF00465 Iron-containing alcohol dehydrogenase CPR_0510 PF00854 POT family CPR_0512 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPR_0512 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPR_0513 PF02675 S-adenosylmethionine decarboxylase CPR_0514 PF01276 Orn/Lys/Arg decarboxylase, major domain CPR_0514 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPR_0515 PF17284 Spermidine synthase tetramerisation domain CPR_0516 PF00491 Arginase family CPR_0517 PF06961 Protein of unknown function (DUF1294) CPR_0518 PF00403 Heavy-metal-associated domain CPR_0519 PF02525 Flavodoxin-like fold CPR_0521 PF00571 CBS domain CPR_0521 PF00005 ABC transporter CPR_0522 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0523 PF04542 Sigma-70 region 2 CPR_0523 PF08281 Sigma-70, region 4 CPR_0525 PF00367 phosphotransferase system, EIIB CPR_0525 PF02378 Phosphotransferase system, EIIC CPR_0527 PF07702 UTRA domain CPR_0527 PF00392 Bacterial regulatory proteins, gntR family CPR_0528 PF03717 Penicillin-binding Protein dimerisation domain CPR_0528 PF03793 PASTA domain CPR_0528 PF00905 Penicillin binding protein transpeptidase domain CPR_0530 PF01872 RibD C-terminal domain CPR_0530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPR_0531 PF00677 Lumazine binding domain CPR_0532 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPR_0532 PF00925 GTP cyclohydrolase II CPR_0533 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPR_0534 PF01894 Uncharacterised protein family UPF0047 CPR_0537 PF17386 Lacto-N-biose phosphorylase C-terminal domain CPR_0537 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain CPR_0537 PF17385 Lacto-N-biose phosphorylase central domain CPR_0538 PF02743 Cache domain CPR_0538 PF06580 Histidine kinase CPR_0538 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0538 PF00672 HAMP domain CPR_0539 PF00072 Response regulator receiver domain CPR_0539 PF12833 Helix-turn-helix domain CPR_0541 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0542 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0543 PF09335 SNARE associated Golgi protein CPR_0545 PF01066 CDP-alcohol phosphatidyltransferase CPR_0547 PF12323 Helix-turn-helix domain CPR_0547 PF07282 Putative transposase DNA-binding domain CPR_0547 PF01385 Probable transposase CPR_0549 PF01384 Phosphate transporter family CPR_0550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPR_0550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPR_0551 PF00294 pfkB family carbohydrate kinase CPR_0552 PF00455 DeoR C terminal sensor domain CPR_0552 PF08220 DeoR-like helix-turn-helix domain CPR_0554 PF01594 AI-2E family transporter CPR_0556 PF00654 Voltage gated chloride channel CPR_0557 PF04960 Glutaminase CPR_0558 PF02308 MgtC family CPR_0560 PF17746 SfsA N-terminal OB domain CPR_0560 PF03749 Sugar fermentation stimulation protein RE domain CPR_0561 PF00293 NUDIX domain CPR_0561 PF09297 NADH pyrophosphatase zinc ribbon domain CPR_0562 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPR_0562 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPR_0564 PF10502 Signal peptidase, peptidase S26 CPR_0565 PF00004 ATPase family associated with various cellular activities (AAA) CPR_0565 PF06480 FtsH Extracellular CPR_0565 PF17862 AAA+ lid domain CPR_0565 PF01434 Peptidase family M41 CPR_0566 PF13538 UvrD-like helicase C-terminal domain CPR_0567 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPR_0568 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0569 PF00005 ABC transporter CPR_0570 PF00884 Sulfatase CPR_0571 PF00535 Glycosyl transferase family 2 CPR_0575 PF00884 Sulfatase CPR_0577 PF02127 Aminopeptidase I zinc metalloprotease (M18) CPR_0580 PF03176 MMPL family CPR_0581 PF03144 Elongation factor Tu domain 2 CPR_0581 PF00009 Elongation factor Tu GTP binding domain CPR_0581 PF16658 Class II release factor RF3, C-terminal domain CPR_0584 PF02397 Bacterial sugar transferase CPR_0585 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPR_0586 PF00534 Glycosyl transferases group 1 CPR_0586 PF13439 Glycosyltransferase Family 4 CPR_0588 PF00534 Glycosyl transferases group 1 CPR_0588 PF13439 Glycosyltransferase Family 4 CPR_0589 PF04991 LicD family CPR_0591 PF08239 Bacterial SH3 domain CPR_0591 PF00246 Zinc carboxypeptidase CPR_0592 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain CPR_0592 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPR_0592 PF17890 Peptidoglycan hydrolase LytB WW-like domain CPR_0592 PF01473 Putative cell wall binding repeat CPR_0596 PF12804 MobA-like NTP transferase domain CPR_0598 PF03816 Cell envelope-related transcriptional attenuator domain CPR_0599 PF05525 Branched-chain amino acid transport protein CPR_0600 PF00579 tRNA synthetases class I (W and Y) CPR_0602 PF13186 Iron-sulfur cluster-binding domain CPR_0602 PF04055 Radical SAM superfamily CPR_0603 PF12849 PBP superfamily domain CPR_0604 PF12849 PBP superfamily domain CPR_0605 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0606 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0607 PF00005 ABC transporter CPR_0608 PF01895 PhoU domain CPR_0609 PF00486 Transcriptional regulatory protein, C terminal CPR_0609 PF00072 Response regulator receiver domain CPR_0611 PF00258 Flavodoxin CPR_0612 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CPR_0612 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPR_0615 PF03323 Bacillus/Clostridium GerA spore germination protein CPR_0619 PF00579 tRNA synthetases class I (W and Y) CPR_0621 PF04607 Region found in RelA / SpoT proteins CPR_0623 PF00005 ABC transporter CPR_0624 PF09967 VWA-like domain (DUF2201) CPR_0624 PF13203 Putative metallopeptidase domain CPR_0626 PF01385 Probable transposase CPR_0626 PF12323 Helix-turn-helix domain CPR_0626 PF07282 Putative transposase DNA-binding domain CPR_0628 PF13936 Helix-turn-helix domain CPR_0630 PF00872 Transposase, Mutator family CPR_0631 PF08239 Bacterial SH3 domain CPR_0631 PF00246 Zinc carboxypeptidase CPR_0636 PF11230 Protein of unknown function (DUF3029) CPR_0637 PF04055 Radical SAM superfamily CPR_0645 PF08264 Anticodon-binding domain of tRNA CPR_0645 PF09334 tRNA synthetases class I (M) CPR_0645 PF00133 tRNA synthetases class I (I, L, M and V) CPR_0645 PF13603 Leucyl-tRNA synthetase, Domain 2 CPR_0648 PF13936 Helix-turn-helix domain CPR_0649 PF03551 Transcriptional regulator PadR-like family CPR_0651 PF00717 Peptidase S24-like CPR_0651 PF01726 LexA DNA binding domain CPR_0658 PF00005 ABC transporter CPR_0658 PF00664 ABC transporter transmembrane region CPR_0658 PF03412 Peptidase C39 family CPR_0659 PF13936 Helix-turn-helix domain CPR_0660 PF13936 Helix-turn-helix domain CPR_0663 PF02237 Biotin protein ligase C terminal domain CPR_0663 PF08279 HTH domain CPR_0663 PF03099 Biotin/lipoate A/B protein ligase family CPR_0667 PF00692 dUTPase CPR_0668 PF01964 Radical SAM ThiC family CPR_0669 PF02769 AIR synthase related protein, C-terminal domain CPR_0669 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPR_0669 PF00586 AIR synthase related protein, N-terminal domain CPR_0670 PF00731 AIR carboxylase CPR_0671 PF01259 SAICAR synthetase CPR_0672 PF00156 Phosphoribosyl transferase domain CPR_0673 PF00586 AIR synthase related protein, N-terminal domain CPR_0673 PF02769 AIR synthase related protein, C-terminal domain CPR_0674 PF00551 Formyl transferase CPR_0675 PF01808 AICARFT/IMPCHase bienzyme CPR_0675 PF02142 MGS-like domain CPR_0676 PF02843 Phosphoribosylglycinamide synthetase, C domain CPR_0676 PF02844 Phosphoribosylglycinamide synthetase, N domain CPR_0676 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPR_0679 PF01385 Probable transposase CPR_0679 PF12323 Helix-turn-helix domain CPR_0679 PF07282 Putative transposase DNA-binding domain CPR_0682 PF02915 Rubrerythrin CPR_0683 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPR_0687 PF00041 Fibronectin type III domain CPR_0687 PF07555 beta-N-acetylglucosaminidase CPR_0687 PF00963 Cohesin domain CPR_0687 PF02838 Glycosyl hydrolase family 20, domain 2 CPR_0687 PF00754 F5/8 type C domain CPR_0688 PF00793 DAHP synthetase I family CPR_0688 PF18152 DAHP synthase ferredoxin-like domain CPR_0689 PF01761 3-dehydroquinate synthase CPR_0690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPR_0691 PF01264 Chorismate synthase CPR_0692 PF01817 Chorismate mutase type II CPR_0692 PF00800 Prephenate dehydratase CPR_0692 PF01842 ACT domain CPR_0693 PF08501 Shikimate dehydrogenase substrate binding domain CPR_0693 PF01488 Shikimate / quinate 5-dehydrogenase CPR_0694 PF01202 Shikimate kinase CPR_0695 PF01220 Dehydroquinase class II CPR_0698 PF13732 Domain of unknown function (DUF4162) CPR_0698 PF00005 ABC transporter CPR_0700 PF01037 Lrp/AsnC ligand binding domain CPR_0701 PF00155 Aminotransferase class I and II CPR_0706 PF00535 Glycosyl transferase family 2 CPR_0707 PF01594 AI-2E family transporter CPR_0708 PF08220 DeoR-like helix-turn-helix domain CPR_0708 PF00455 DeoR C terminal sensor domain CPR_0711 PF07282 Putative transposase DNA-binding domain CPR_0711 PF12323 Helix-turn-helix domain CPR_0711 PF01385 Probable transposase CPR_0712 PF13936 Helix-turn-helix domain CPR_0714 PF03466 LysR substrate binding domain CPR_0714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPR_0715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPR_0715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_0721 PF02683 Cytochrome C biogenesis protein transmembrane region CPR_0723 PF07282 Putative transposase DNA-binding domain CPR_0723 PF12323 Helix-turn-helix domain CPR_0723 PF01385 Probable transposase CPR_0724 PF07859 alpha/beta hydrolase fold CPR_0725 PF02554 Carbon starvation protein CstA CPR_0727 PF00440 Bacterial regulatory proteins, tetR family CPR_0728 PF00005 ABC transporter CPR_0735 PF13396 Phospholipase_D-nuclease N-terminal CPR_0735 PF13091 PLD-like domain CPR_0736 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CPR_0736 PF09297 NADH pyrophosphatase zinc ribbon domain CPR_0736 PF00293 NUDIX domain CPR_0737 PF07969 Amidohydrolase family CPR_0739 PF00892 EamA-like transporter family CPR_0740 PF17853 GGDEF-like domain CPR_0740 PF13556 PucR C-terminal helix-turn-helix domain CPR_0741 PF01327 Polypeptide deformylase CPR_0742 PF00375 Sodium:dicarboxylate symporter family CPR_0743 PF13419 Haloacid dehalogenase-like hydrolase CPR_0749 PF02311 AraC-like ligand binding domain CPR_0749 PF12833 Helix-turn-helix domain CPR_0750 PF02929 Beta galactosidase small chain CPR_0750 PF02837 Glycosyl hydrolases family 2, sugar binding domain CPR_0750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CPR_0750 PF00703 Glycosyl hydrolases family 2 CPR_0753 PF04405 Domain of Unknown function (DUF542) CPR_0753 PF01814 Hemerythrin HHE cation binding domain CPR_0754 PF00027 Cyclic nucleotide-binding domain CPR_0754 PF13545 Crp-like helix-turn-helix domain CPR_0755 PF00301 Rubredoxin CPR_0756 PF00175 Oxidoreductase NAD-binding domain CPR_0756 PF00042 Globin CPR_0756 PF00970 Oxidoreductase FAD-binding domain CPR_0757 PF13545 Crp-like helix-turn-helix domain CPR_0757 PF00027 Cyclic nucleotide-binding domain CPR_0764 PF00005 ABC transporter CPR_0768 PF00301 Rubredoxin CPR_0770 PF00753 Metallo-beta-lactamase superfamily CPR_0770 PF00301 Rubredoxin CPR_0770 PF00258 Flavodoxin CPR_0771 PF02558 Ketopantoate reductase PanE/ApbA CPR_0771 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPR_0772 PF12323 Helix-turn-helix domain CPR_0772 PF07282 Putative transposase DNA-binding domain CPR_0772 PF01385 Probable transposase CPR_0776 PF02678 Pirin CPR_0776 PF05726 Pirin C-terminal cupin domain CPR_0777 PF02525 Flavodoxin-like fold CPR_0778 PF01497 Periplasmic binding protein CPR_0779 PF01032 FecCD transport family CPR_0780 PF01032 FecCD transport family CPR_0781 PF00005 ABC transporter CPR_0782 PF00293 NUDIX domain CPR_0788 PF02811 PHP domain CPR_0789 PF16657 Maltogenic Amylase, C-terminal domain CPR_0789 PF00128 Alpha amylase, catalytic domain CPR_0789 PF02903 Alpha amylase, N-terminal ig-like domain CPR_0790 PF03313 Serine dehydratase alpha chain CPR_0794 PF01497 Periplasmic binding protein CPR_0795 PF01032 FecCD transport family CPR_0796 PF01032 FecCD transport family CPR_0797 PF00005 ABC transporter CPR_0804 PF03830 PTS system sorbose subfamily IIB component CPR_0804 PF03610 PTS system fructose IIA component CPR_0805 PF03609 PTS system sorbose-specific iic component CPR_0806 PF03613 PTS system mannose/fructose/sorbose family IID component CPR_0810 PF00457 Glycosyl hydrolases family 11 CPR_0810 PF01522 Polysaccharide deacetylase CPR_0810 PF03422 Carbohydrate binding module (family 6) CPR_0815 PF02837 Glycosyl hydrolases family 2, sugar binding domain CPR_0815 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CPR_0815 PF00703 Glycosyl hydrolases family 2 CPR_0815 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CPR_0816 PF00188 Cysteine-rich secretory protein family CPR_0817 PF00005 ABC transporter CPR_0818 PF00005 ABC transporter CPR_0819 PF03176 MMPL family CPR_0822 PF13333 Integrase core domain CPR_0822 PF00665 Integrase core domain CPR_0822 PF13276 HTH-like domain CPR_0825 PF01022 Bacterial regulatory protein, arsR family CPR_0827 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPR_0828 PF01554 MatE CPR_0829 PF00486 Transcriptional regulatory protein, C terminal CPR_0829 PF00072 Response regulator receiver domain CPR_0831 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_0833 PF03415 Clostripain family CPR_0837 PF02687 FtsX-like permease family CPR_0839 PF00266 Aminotransferase class-V CPR_0840 PF02915 Rubrerythrin CPR_0842 PF00465 Iron-containing alcohol dehydrogenase CPR_0844 PF13556 PucR C-terminal helix-turn-helix domain CPR_0844 PF17853 GGDEF-like domain CPR_0844 PF05651 Putative sugar diacid recognition CPR_0845 PF02447 GntP family permease CPR_0846 PF02595 Glycerate kinase family CPR_0847 PF00270 DEAD/DEAH box helicase CPR_0847 PF03880 DbpA RNA binding domain CPR_0847 PF00271 Helicase conserved C-terminal domain CPR_0848 PF01554 MatE CPR_0850 PF00041 Fibronectin type III domain CPR_0850 PF00963 Cohesin domain CPR_0850 PF07555 beta-N-acetylglucosaminidase CPR_0850 PF02838 Glycosyl hydrolase family 20, domain 2 CPR_0850 PF00754 F5/8 type C domain CPR_0852 PF01168 Alanine racemase, N-terminal domain CPR_0852 PF00842 Alanine racemase, C-terminal domain CPR_0854 PF00557 Metallopeptidase family M24 CPR_0855 PF02073 Thermophilic metalloprotease (M29) CPR_0857 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPR_0857 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPR_0858 PF00583 Acetyltransferase (GNAT) family CPR_0864 PF00293 NUDIX domain CPR_0866 PF09335 SNARE associated Golgi protein CPR_0867 PF00255 Glutathione peroxidase CPR_0868 PF12792 CSS motif domain associated with EAL CPR_0868 PF00563 EAL domain CPR_0870 PF01022 Bacterial regulatory protein, arsR family CPR_0871 PF13630 SdpI/YhfL protein family CPR_0871 PF07853 Protein of unknown function (DUF1648) CPR_0877 PF13859 BNR repeat-like domain CPR_0879 PF02517 CPBP intramembrane metalloprotease CPR_0886 PF00488 MutS domain V CPR_0886 PF05190 MutS family domain IV CPR_0886 PF05188 MutS domain II CPR_0886 PF05192 MutS domain III CPR_0886 PF01624 MutS domain I CPR_0889 PF07282 Putative transposase DNA-binding domain CPR_0889 PF01385 Probable transposase CPR_0889 PF12323 Helix-turn-helix domain CPR_0898 PF00293 NUDIX domain CPR_0903 PF00356 Bacterial regulatory proteins, lacI family CPR_0904 PF13416 Bacterial extracellular solute-binding protein CPR_0905 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0906 PF00528 Binding-protein-dependent transport system inner membrane component CPR_0907 PF00005 ABC transporter CPR_0907 PF17912 MalK OB fold domain CPR_0907 PF03459 TOBE domain CPR_0908 PF00251 Glycosyl hydrolases family 32 N-terminal domain CPR_0908 PF08244 Glycosyl hydrolases family 32 C terminal CPR_0909 PF00294 pfkB family carbohydrate kinase CPR_0915 PF01867 CRISPR associated protein Cas1 CPR_0917 PF09827 CRISPR associated protein Cas2 CPR_0922 PF18395 Cas3 C-terminal domain CPR_0922 PF18019 HD domain CPR_0922 PF00270 DEAD/DEAH box helicase CPR_0927 PF00465 Iron-containing alcohol dehydrogenase CPR_0928 PF02311 AraC-like ligand binding domain CPR_0928 PF12833 Helix-turn-helix domain CPR_0931 PF12792 CSS motif domain associated with EAL CPR_0931 PF00563 EAL domain CPR_0934 PF05067 Manganese containing catalase CPR_0935 PF00367 phosphotransferase system, EIIB CPR_0935 PF02378 Phosphotransferase system, EIIC CPR_0938 PF12838 4Fe-4S dicluster domain CPR_0938 PF02256 Iron hydrogenase small subunit CPR_0938 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPR_0948 PF00686 Starch binding domain CPR_0948 PF00128 Alpha amylase, catalytic domain CPR_0949 PF16403 Domain of unknown function (DUF5011) CPR_0967 PF13936 Helix-turn-helix domain CPR_0968 PF00082 Subtilase family CPR_0968 PF00746 LPXTG cell wall anchor motif CPR_0968 PF02225 PA domain CPR_0968 PF06280 Fn3-like domain CPR_0970 PF02421 Ferrous iron transport protein B CPR_0970 PF07670 Nucleoside recognition CPR_0970 PF17910 FeoB cytosolic helical domain CPR_0970 PF07664 Ferrous iron transport protein B C terminus CPR_0974 PF03063 Prismane/CO dehydrogenase family CPR_0980 PF01638 HxlR-like helix-turn-helix CPR_0983 PF01545 Cation efflux family CPR_0983 PF16916 Dimerisation domain of Zinc Transporter CPR_0984 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPR_0984 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_0986 PF04434 SWIM zinc finger CPR_0986 PF00176 SNF2 family N-terminal domain CPR_0986 PF00271 Helicase conserved C-terminal domain CPR_0987 PF01479 S4 domain CPR_0987 PF00849 RNA pseudouridylate synthase CPR_0989 PF12323 Helix-turn-helix domain CPR_0989 PF01385 Probable transposase CPR_0989 PF07282 Putative transposase DNA-binding domain CPR_0990 PF00689 Cation transporting ATPase, C-terminus CPR_0990 PF00690 Cation transporter/ATPase, N-terminus CPR_0994 PF09335 SNARE associated Golgi protein CPR_0996 PF01966 HD domain CPR_0997 PF00881 Nitroreductase family CPR_1001 PF00230 Major intrinsic protein CPR_1002 PF07694 5TMR of 5TMR-LYT CPR_1002 PF06580 Histidine kinase CPR_1003 PF00072 Response regulator receiver domain CPR_1003 PF00196 Bacterial regulatory proteins, luxR family CPR_1004 PF02286 Dehydratase large subunit CPR_1005 PF02288 Dehydratase medium subunit CPR_1006 PF02287 Dehydratase small subunit CPR_1007 PF08841 Diol dehydratase reactivase ATPase-like domain CPR_1007 PF18427 DD-reactivating factor swiveling domain CPR_1008 PF02288 Dehydratase medium subunit CPR_1009 PF01923 Cobalamin adenosyltransferase CPR_1010 PF03928 Haem-degrading CPR_1011 PF00465 Iron-containing alcohol dehydrogenase CPR_1012 PF13520 Amino acid permease CPR_1013 PF01794 Ferric reductase like transmembrane component CPR_1013 PF04205 FMN-binding domain CPR_1019 PF00375 Sodium:dicarboxylate symporter family CPR_1020 PF00486 Transcriptional regulatory protein, C terminal CPR_1020 PF00072 Response regulator receiver domain CPR_1021 PF00005 ABC transporter CPR_1023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1023 PF00512 His Kinase A (phospho-acceptor) domain CPR_1023 PF16736 Single Cache-like CPR_1023 PF00989 PAS fold CPR_1026 PF00255 Glutathione peroxidase CPR_1029 PF00293 NUDIX domain CPR_1031 PF07282 Putative transposase DNA-binding domain CPR_1031 PF01385 Probable transposase CPR_1031 PF12323 Helix-turn-helix domain CPR_1032 PF01047 MarR family CPR_1034 PF13520 Amino acid permease CPR_1035 PF01590 GAF domain CPR_1035 PF00990 Diguanylate cyclase, GGDEF domain CPR_1035 PF00360 Phytochrome region CPR_1035 PF00563 EAL domain CPR_1038 PF02254 TrkA-N domain CPR_1038 PF02080 TrkA-C domain CPR_1038 PF00999 Sodium/hydrogen exchanger family CPR_1041 PF10282 Lactonase, 7-bladed beta-propeller CPR_1042 PF00009 Elongation factor Tu GTP binding domain CPR_1042 PF00679 Elongation factor G C-terminus CPR_1042 PF14492 Elongation Factor G, domain II CPR_1042 PF03764 Elongation factor G, domain IV CPR_1046 PF02705 K+ potassium transporter CPR_1047 PF00210 Ferritin-like domain CPR_1048 PF12833 Helix-turn-helix domain CPR_1049 PF12323 Helix-turn-helix domain CPR_1049 PF07282 Putative transposase DNA-binding domain CPR_1049 PF01385 Probable transposase CPR_1053 PF03323 Bacillus/Clostridium GerA spore germination protein CPR_1054 PF03606 C4-dicarboxylate anaerobic carrier CPR_1055 PF00072 Response regulator receiver domain CPR_1055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1055 PF09308 LuxQ, periplasmic CPR_1055 PF00512 His Kinase A (phospho-acceptor) domain CPR_1057 PF03315 Serine dehydratase beta chain CPR_1057 PF01842 ACT domain CPR_1058 PF03313 Serine dehydratase alpha chain CPR_1059 PF01171 PP-loop family CPR_1060 PF01416 tRNA pseudouridine synthase CPR_1061 PF03060 Nitronate monooxygenase CPR_1062 PF00027 Cyclic nucleotide-binding domain CPR_1062 PF13545 Crp-like helix-turn-helix domain CPR_1067 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPR_1070 PF00155 Aminotransferase class I and II CPR_1073 PF05979 Bacterial protein of unknown function (DUF896) CPR_1074 PF02603 HPr Serine kinase N terminus CPR_1074 PF07475 HPr Serine kinase C-terminal domain CPR_1075 PF01544 CorA-like Mg2+ transporter protein CPR_1076 PF02127 Aminopeptidase I zinc metalloprotease (M18) CPR_1077 PF02142 MGS-like domain CPR_1078 PF13936 Helix-turn-helix domain CPR_1082 PF00664 ABC transporter transmembrane region CPR_1082 PF00005 ABC transporter CPR_1082 PF03412 Peptidase C39 family CPR_1083 PF13533 Biotin-lipoyl like CPR_1088 PF13936 Helix-turn-helix domain CPR_1089 PF01042 Endoribonuclease L-PSP CPR_1091 PF00258 Flavodoxin CPR_1091 PF00753 Metallo-beta-lactamase superfamily CPR_1092 PF02811 PHP domain CPR_1093 PF00591 Glycosyl transferase family, a/b domain CPR_1093 PF02885 Glycosyl transferase family, helical bundle domain CPR_1093 PF00117 Glutamine amidotransferase class-I CPR_1095 PF01063 Amino-transferase class IV CPR_1096 PF01227 GTP cyclohydrolase I CPR_1098 PF00809 Pterin binding enzyme CPR_1099 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPR_1099 PF02152 Dihydroneopterin aldolase CPR_1102 PF01569 PAP2 superfamily CPR_1103 PF02887 Pyruvate kinase, alpha/beta domain CPR_1103 PF00224 Pyruvate kinase, barrel domain CPR_1105 PF01022 Bacterial regulatory protein, arsR family CPR_1106 PF07687 Peptidase dimerisation domain CPR_1106 PF01546 Peptidase family M20/M25/M40 CPR_1108 PF02277 Phosphoribosyltransferase CPR_1109 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CPR_1110 PF02654 Cobalamin-5-phosphate synthase CPR_1113 PF03186 CobD/Cbib protein CPR_1114 PF00155 Aminotransferase class I and II CPR_1115 PF01497 Periplasmic binding protein CPR_1116 PF01032 FecCD transport family CPR_1117 PF00005 ABC transporter CPR_1119 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPR_1120 PF03063 Prismane/CO dehydrogenase family CPR_1124 PF00581 Rhodanese-like domain CPR_1126 PF06949 Protein of unknown function (DUF1292) CPR_1128 PF02811 PHP domain CPR_1130 PF00795 Carbon-nitrogen hydrolase CPR_1130 PF02540 NAD synthase CPR_1132 PF01145 SPFH domain / Band 7 family CPR_1133 PF00842 Alanine racemase, C-terminal domain CPR_1133 PF01168 Alanine racemase, N-terminal domain CPR_1134 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPR_1135 PF01047 MarR family CPR_1136 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPR_1136 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPR_1137 PF00698 Acyl transferase domain CPR_1139 PF02801 Beta-ketoacyl synthase, C-terminal domain CPR_1139 PF00109 Beta-ketoacyl synthase, N-terminal domain CPR_1140 PF00364 Biotin-requiring enzyme CPR_1141 PF07977 FabA-like domain CPR_1142 PF00289 Biotin carboxylase, N-terminal domain CPR_1142 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPR_1142 PF02785 Biotin carboxylase C-terminal domain CPR_1143 PF01039 Carboxyl transferase domain CPR_1143 PF17848 Acetyl-coA carboxylase zinc finger domain CPR_1144 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPR_1147 PF00849 RNA pseudouridylate synthase CPR_1147 PF01479 S4 domain CPR_1148 PF06962 Putative rRNA methylase CPR_1149 PF01380 SIS domain CPR_1149 PF01418 Helix-turn-helix domain, rpiR family CPR_1151 PF02224 Cytidylate kinase CPR_1152 PF02401 LytB protein CPR_1155 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CPR_1156 PF04055 Radical SAM superfamily CPR_1156 PF00919 Uncharacterized protein family UPF0004 CPR_1156 PF01938 TRAM domain CPR_1157 PF14010 Phosphoenolpyruvate carboxylase CPR_1160 PF04198 Putative sugar-binding domain CPR_1160 PF13936 Helix-turn-helix domain CPR_1161 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CPR_1162 PF08218 Citrate lyase ligase C-terminal domain CPR_1163 PF06857 Malonate decarboxylase delta subunit (MdcD) CPR_1164 PF03328 HpcH/HpaI aldolase/citrate lyase family CPR_1165 PF04223 Citrate lyase, alpha subunit (CitF) CPR_1166 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CPR_1167 PF03949 Malic enzyme, NAD binding domain CPR_1167 PF00390 Malic enzyme, N-terminal domain CPR_1168 PF03390 2-hydroxycarboxylate transporter family CPR_1169 PF02901 Pyruvate formate lyase-like CPR_1169 PF01228 Glycine radical CPR_1170 PF04055 Radical SAM superfamily CPR_1171 PF05192 MutS domain III CPR_1171 PF05188 MutS domain II CPR_1171 PF01624 MutS domain I CPR_1171 PF00488 MutS domain V CPR_1171 PF05190 MutS family domain IV CPR_1172 PF01119 DNA mismatch repair protein, C-terminal domain CPR_1172 PF08676 MutL C terminal dimerisation domain CPR_1174 PF17209 Hfq protein CPR_1175 PF06838 Methionine gamma-lyase CPR_1177 PF01726 LexA DNA binding domain CPR_1177 PF00717 Peptidase S24-like CPR_1179 PF00589 Phage integrase family CPR_1179 PF02899 Phage integrase, N-terminal SAM-like domain CPR_1181 PF13291 ACT domain CPR_1181 PF00291 Pyridoxal-phosphate dependent enzyme CPR_1182 PF00324 Amino acid permease CPR_1183 PF00375 Sodium:dicarboxylate symporter family CPR_1192 PF03372 Endonuclease/Exonuclease/phosphatase family CPR_1193 PF00583 Acetyltransferase (GNAT) family CPR_1196 PF00156 Phosphoribosyl transferase domain CPR_1198 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPR_1198 PF00175 Oxidoreductase NAD-binding domain CPR_1199 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPR_1200 PF01979 Amidohydrolase family CPR_1201 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPR_1201 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPR_1203 PF00365 Phosphofructokinase CPR_1204 PF02673 Bacitracin resistance protein BacA CPR_1205 PF01238 Phosphomannose isomerase type I CPR_1206 PF08353 Domain of unknown function (DUF1727) CPR_1206 PF08245 Mur ligase middle domain CPR_1207 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPR_1212 PF13520 Amino acid permease CPR_1216 PF08497 Radical SAM N-terminal CPR_1216 PF11842 Domain of unknown function (DUF3362) CPR_1216 PF04055 Radical SAM superfamily CPR_1218 PF01554 MatE CPR_1224 PF01479 S4 domain CPR_1224 PF00849 RNA pseudouridylate synthase CPR_1225 PF07687 Peptidase dimerisation domain CPR_1225 PF01546 Peptidase family M20/M25/M40 CPR_1226 PF13361 UvrD-like helicase C-terminal domain CPR_1226 PF00580 UvrD/REP helicase N-terminal domain CPR_1227 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CPR_1227 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CPR_1227 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CPR_1230 PF01475 Ferric uptake regulator family CPR_1231 PF01546 Peptidase family M20/M25/M40 CPR_1232 PF00860 Permease family CPR_1233 PF02571 Precorrin-6x reductase CbiJ/CobK CPR_1234 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPR_1236 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPR_1237 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPR_1238 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPR_1240 PF01888 CbiD CPR_1241 PF02570 Precorrin-8X methylmutase CPR_1242 PF06180 Cobalt chelatase (CbiK) CPR_1243 PF06725 3D domain CPR_1243 PF01476 LysM domain CPR_1245 PF08239 Bacterial SH3 domain CPR_1248 PF07555 beta-N-acetylglucosaminidase CPR_1248 PF00754 F5/8 type C domain CPR_1248 PF02838 Glycosyl hydrolase family 20, domain 2 CPR_1248 PF00041 Fibronectin type III domain CPR_1248 PF00963 Cohesin domain CPR_1251 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPR_1251 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPR_1255 PF01769 Divalent cation transporter CPR_1255 PF03448 MgtE intracellular N domain CPR_1255 PF00571 CBS domain CPR_1258 PF09924 Uncharacterised conserved protein (DUF2156) CPR_1258 PF03706 Lysylphosphatidylglycerol synthase TM region CPR_1259 PF03706 Lysylphosphatidylglycerol synthase TM region CPR_1259 PF09924 Uncharacterised conserved protein (DUF2156) CPR_1263 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_1263 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPR_1263 PF13247 4Fe-4S dicluster domain CPR_1264 PF00175 Oxidoreductase NAD-binding domain CPR_1264 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPR_1265 PF00465 Iron-containing alcohol dehydrogenase CPR_1266 PF08239 Bacterial SH3 domain CPR_1266 PF01520 N-acetylmuramoyl-L-alanine amidase CPR_1270 PF01272 Transcription elongation factor, GreA/GreB, C-term CPR_1270 PF03449 Transcription elongation factor, N-terminal CPR_1273 PF01207 Dihydrouridine synthase (Dus) CPR_1274 PF01554 MatE CPR_1278 PF16403 Domain of unknown function (DUF5011) CPR_1279 PF07690 Major Facilitator Superfamily CPR_1281 PF01773 Na+ dependent nucleoside transporter N-terminus CPR_1281 PF07662 Na+ dependent nucleoside transporter C-terminus CPR_1283 PF01047 MarR family CPR_1287 PF00156 Phosphoribosyl transferase domain CPR_1291 PF01668 SmpB protein CPR_1292 PF00773 RNB domain CPR_1292 PF00575 S1 RNA binding domain CPR_1292 PF17876 Cold shock domain CPR_1292 PF08206 Ribonuclease B OB domain CPR_1294 PF17099 Tryptophan transporter TrpP CPR_1295 PF03952 Enolase, N-terminal domain CPR_1295 PF00113 Enolase, C-terminal TIM barrel domain CPR_1297 PF13520 Amino acid permease CPR_1298 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPR_1298 PF01676 Metalloenzyme superfamily CPR_1299 PF00121 Triosephosphate isomerase CPR_1300 PF00162 Phosphoglycerate kinase CPR_1301 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPR_1301 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPR_1302 PF04198 Putative sugar-binding domain CPR_1303 PF04552 Sigma-54, DNA binding domain CPR_1303 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPR_1303 PF04963 Sigma-54 factor, core binding domain CPR_1306 PF02608 ABC transporter substrate-binding protein PnrA-like CPR_1307 PF02645 Uncharacterised protein, DegV family COG1307 CPR_1308 PF00588 SpoU rRNA Methylase family CPR_1310 PF04294 VanW like protein CPR_1312 PF07478 D-ala D-ala ligase C-terminus CPR_1312 PF01820 D-ala D-ala ligase N-terminus CPR_1316 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1316 PF08448 PAS fold CPR_1316 PF00512 His Kinase A (phospho-acceptor) domain CPR_1316 PF00072 Response regulator receiver domain CPR_1316 PF13426 PAS domain CPR_1317 PF00892 EamA-like transporter family CPR_1318 PF10576 Iron-sulfur binding domain of endonuclease III CPR_1318 PF00633 Helix-hairpin-helix motif CPR_1318 PF00730 HhH-GPD superfamily base excision DNA repair protein CPR_1320 PF08331 Domain of unknown function (DUF1730) CPR_1321 PF00132 Bacterial transferase hexapeptide (six repeats) CPR_1322 PF00291 Pyridoxal-phosphate dependent enzyme CPR_1323 PF03448 MgtE intracellular N domain CPR_1323 PF00571 CBS domain CPR_1323 PF01769 Divalent cation transporter CPR_1324 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPR_1325 PF00528 Binding-protein-dependent transport system inner membrane component CPR_1326 PF00005 ABC transporter CPR_1328 PF00781 Diacylglycerol kinase catalytic domain CPR_1329 PF01066 CDP-alcohol phosphatidyltransferase CPR_1332 PF04293 SpoVR like protein CPR_1333 PF04285 Protein of unknown function (DUF444) CPR_1334 PF08298 PrkA AAA domain CPR_1334 PF06798 PrkA serine protein kinase C-terminal domain CPR_1335 PF00270 DEAD/DEAH box helicase CPR_1335 PF00570 HRDC domain CPR_1335 PF16124 RecQ zinc-binding CPR_1335 PF09382 RQC domain CPR_1335 PF00271 Helicase conserved C-terminal domain CPR_1336 PF02581 Thiamine monophosphate synthase CPR_1337 PF02110 Hydroxyethylthiazole kinase family CPR_1338 PF08543 Phosphomethylpyrimidine kinase CPR_1340 PF00356 Bacterial regulatory proteins, lacI family CPR_1341 PF13407 Periplasmic binding protein domain CPR_1342 PF00005 ABC transporter CPR_1343 PF02653 Branched-chain amino acid transport system / permease component CPR_1344 PF01263 Aldose 1-epimerase CPR_1345 PF08544 GHMP kinases C terminal CPR_1345 PF10509 Galactokinase galactose-binding signature CPR_1345 PF00288 GHMP kinases N terminal domain CPR_1346 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CPR_1346 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CPR_1347 PF02824 TGS domain CPR_1347 PF03129 Anticodon binding domain CPR_1347 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPR_1347 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPR_1348 PF04239 Protein of unknown function (DUF421) CPR_1350 PF01116 Fructose-bisphosphate aldolase class-II CPR_1353 PF00877 NlpC/P60 family CPR_1356 PF04073 Aminoacyl-tRNA editing domain CPR_1360 PF12706 Beta-lactamase superfamily domain CPR_1364 PF09515 Thiamine transporter protein (Thia_YuaJ) CPR_1365 PF00155 Aminotransferase class I and II CPR_1366 PF01699 Sodium/calcium exchanger protein CPR_1371 PF02557 D-alanyl-D-alanine carboxypeptidase CPR_1373 PF13936 Helix-turn-helix domain CPR_1375 PF00557 Metallopeptidase family M24 CPR_1381 PF01926 50S ribosome-binding GTPase CPR_1382 PF02190 ATP-dependent protease La (LON) substrate-binding domain CPR_1382 PF05362 Lon protease (S16) C-terminal proteolytic domain CPR_1382 PF00004 ATPase family associated with various cellular activities (AAA) CPR_1383 PF05362 Lon protease (S16) C-terminal proteolytic domain CPR_1383 PF00004 ATPase family associated with various cellular activities (AAA) CPR_1384 PF07724 AAA domain (Cdc48 subfamily) CPR_1384 PF06689 ClpX C4-type zinc finger CPR_1384 PF10431 C-terminal, D2-small domain, of ClpB protein CPR_1385 PF00574 Clp protease CPR_1386 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPR_1386 PF05697 Bacterial trigger factor protein (TF) CPR_1386 PF05698 Bacterial trigger factor protein (TF) C-terminus CPR_1389 PF00271 Helicase conserved C-terminal domain CPR_1389 PF00270 DEAD/DEAH box helicase CPR_1391 PF01048 Phosphorylase superfamily CPR_1394 PF02811 PHP domain CPR_1394 PF14579 Helix-hairpin-helix motif CPR_1394 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPR_1394 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPR_1394 PF11490 DNA polymerase III polC-type N-terminus II CPR_1394 PF00929 Exonuclease CPR_1394 PF01336 OB-fold nucleic acid binding domain CPR_1395 PF05193 Peptidase M16 inactive domain CPR_1395 PF08367 Peptidase M16C associated CPR_1395 PF00675 Insulinase (Peptidase family M16) CPR_1400 PF00654 Voltage gated chloride channel CPR_1402 PF02926 THUMP domain CPR_1402 PF02568 Thiamine biosynthesis protein (ThiI) CPR_1403 PF00266 Aminotransferase class-V CPR_1405 PF09261 Alpha mannosidase middle domain CPR_1405 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 CPR_1405 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain CPR_1405 PF07748 Glycosyl hydrolases family 38 C-terminal domain CPR_1405 PF01074 Glycosyl hydrolases family 38 N-terminal domain CPR_1406 PF02574 Homocysteine S-methyltransferase CPR_1406 PF02219 Methylenetetrahydrofolate reductase CPR_1408 PF01235 Sodium:alanine symporter family CPR_1409 PF12822 ECF transporter, substrate-specific component CPR_1410 PF03576 Peptidase family S58 CPR_1411 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPR_1413 PF01470 Pyroglutamyl peptidase CPR_1416 PF10431 C-terminal, D2-small domain, of ClpB protein CPR_1416 PF02861 Clp amino terminal domain, pathogenicity island component CPR_1416 PF07724 AAA domain (Cdc48 subfamily) CPR_1416 PF17871 AAA lid domain CPR_1416 PF00004 ATPase family associated with various cellular activities (AAA) CPR_1418 PF13396 Phospholipase_D-nuclease N-terminal CPR_1418 PF13091 PLD-like domain CPR_1419 PF00202 Aminotransferase class-III CPR_1420 PF00490 Delta-aminolevulinic acid dehydratase CPR_1422 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CPR_1422 PF03900 Porphobilinogen deaminase, C-terminal domain CPR_1424 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CPR_1424 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CPR_1424 PF01488 Shikimate / quinate 5-dehydrogenase CPR_1425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPR_1425 PF13187 4Fe-4S dicluster domain CPR_1425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPR_1426 PF00175 Oxidoreductase NAD-binding domain CPR_1426 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPR_1427 PF17179 4Fe-4S dicluster domain CPR_1429 PF01226 Formate/nitrite transporter CPR_1431 PF01541 GIY-YIG catalytic domain CPR_1432 PF02311 AraC-like ligand binding domain CPR_1432 PF12833 Helix-turn-helix domain CPR_1438 PF01694 Rhomboid family CPR_1439 PF08439 Oligopeptidase F CPR_1439 PF01432 Peptidase family M3 CPR_1442 PF00005 ABC transporter CPR_1443 PF00950 ABC 3 transport family CPR_1445 PF01475 Ferric uptake regulator family CPR_1446 PF00365 Phosphofructokinase CPR_1448 PF00266 Aminotransferase class-V CPR_1449 PF00005 ABC transporter CPR_1449 PF16326 ABC transporter C-terminal domain CPR_1449 PF12848 ABC transporter CPR_1450 PF00692 dUTPase CPR_1453 PF03006 Haemolysin-III related CPR_1454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPR_1454 PF03466 LysR substrate binding domain CPR_1456 PF01522 Polysaccharide deacetylase CPR_1459 PF01740 STAS domain CPR_1459 PF00916 Sulfate permease family CPR_1461 PF00294 pfkB family carbohydrate kinase CPR_1461 PF01467 Cytidylyltransferase-like CPR_1464 PF00005 ABC transporter CPR_1475 PF09335 SNARE associated Golgi protein CPR_1476 PF09335 SNARE associated Golgi protein CPR_1477 PF01171 PP-loop family CPR_1480 PF03772 Competence protein CPR_1480 PF13567 Domain of unknown function (DUF4131) CPR_1480 PF00753 Metallo-beta-lactamase superfamily CPR_1482 PF00072 Response regulator receiver domain CPR_1482 PF04397 LytTr DNA-binding domain CPR_1483 PF01520 N-acetylmuramoyl-L-alanine amidase CPR_1484 PF01910 Thiamine-binding protein CPR_1485 PF06725 3D domain CPR_1485 PF07501 G5 domain CPR_1485 PF03990 G5-linked-Ubiquitin-like domain CPR_1486 PF00860 Permease family CPR_1487 PF00005 ABC transporter CPR_1487 PF12848 ABC transporter CPR_1488 PF00457 Glycosyl hydrolases family 11 CPR_1488 PF01522 Polysaccharide deacetylase CPR_1488 PF03422 Carbohydrate binding module (family 6) CPR_1489 PF01751 Toprim domain CPR_1489 PF01131 DNA topoisomerase CPR_1493 PF09308 LuxQ, periplasmic CPR_1493 PF00072 Response regulator receiver domain CPR_1493 PF00512 His Kinase A (phospho-acceptor) domain CPR_1493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1495 PF03062 MBOAT, membrane-bound O-acyltransferase family CPR_1497 PF00271 Helicase conserved C-terminal domain CPR_1497 PF00270 DEAD/DEAH box helicase CPR_1499 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPR_1499 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPR_1501 PF01063 Amino-transferase class IV CPR_1507 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CPR_1508 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CPR_1510 PF00294 pfkB family carbohydrate kinase CPR_1511 PF08244 Glycosyl hydrolases family 32 C terminal CPR_1511 PF00251 Glycosyl hydrolases family 32 N-terminal domain CPR_1512 PF00356 Bacterial regulatory proteins, lacI family CPR_1512 PF13407 Periplasmic binding protein domain CPR_1513 PF02378 Phosphotransferase system, EIIC CPR_1513 PF00367 phosphotransferase system, EIIB CPR_1515 PF02632 BioY family CPR_1516 PF06207 Protein of unknown function (DUF1002) CPR_1517 PF17866 AAA lid domain CPR_1517 PF00004 ATPase family associated with various cellular activities (AAA) CPR_1518 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPR_1518 PF01568 Molydopterin dinucleotide binding domain CPR_1518 PF00384 Molybdopterin oxidoreductase CPR_1519 PF14572 Phosphoribosyl synthetase-associated domain CPR_1519 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPR_1521 PF01522 Polysaccharide deacetylase CPR_1521 PF00457 Glycosyl hydrolases family 11 CPR_1521 PF03422 Carbohydrate binding module (family 6) CPR_1522 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPR_1522 PF00128 Alpha amylase, catalytic domain CPR_1522 PF03714 Bacterial pullanase-associated domain CPR_1523 PF10502 Signal peptidase, peptidase S26 CPR_1527 PF11728 Putative aromatic acid exporter C-terminal domain CPR_1527 PF06081 Aromatic acid exporter family member 1 CPR_1528 PF01255 Putative undecaprenyl diphosphate synthase CPR_1530 PF01966 HD domain CPR_1532 PF04647 Accessory gene regulator B CPR_1536 PF01699 Sodium/calcium exchanger protein CPR_1538 PF00817 impB/mucB/samB family CPR_1538 PF11799 impB/mucB/samB family C-terminal domain CPR_1539 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPR_1545 PF04262 Glutamate-cysteine ligase CPR_1545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPR_1545 PF18419 ATP-grasp-like domain CPR_1547 PF00860 Permease family CPR_1552 PF02608 ABC transporter substrate-binding protein PnrA-like CPR_1555 PF00005 ABC transporter CPR_1555 PF12558 ATP-binding cassette cobalt transporter CPR_1556 PF07155 ECF-type riboflavin transporter, S component CPR_1557 PF00581 Rhodanese-like domain CPR_1558 PF00128 Alpha amylase, catalytic domain CPR_1558 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPR_1558 PF03714 Bacterial pullanase-associated domain CPR_1559 PF00128 Alpha amylase, catalytic domain CPR_1559 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPR_1559 PF02806 Alpha amylase, C-terminal all-beta domain CPR_1564 PF03706 Lysylphosphatidylglycerol synthase TM region CPR_1564 PF09924 Uncharacterised conserved protein (DUF2156) CPR_1565 PF12323 Helix-turn-helix domain CPR_1565 PF01385 Probable transposase CPR_1565 PF07282 Putative transposase DNA-binding domain CPR_1569 PF02581 Thiamine monophosphate synthase CPR_1571 PF05690 Thiazole biosynthesis protein ThiG CPR_1572 PF00581 Rhodanese-like domain CPR_1572 PF00899 ThiF family CPR_1573 PF02597 ThiS family CPR_1573 PF05690 Thiazole biosynthesis protein ThiG CPR_1574 PF07690 Major Facilitator Superfamily CPR_1577 PF01641 SelR domain CPR_1578 PF13936 Helix-turn-helix domain CPR_1582 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CPR_1582 PF01522 Polysaccharide deacetylase CPR_1583 PF12323 Helix-turn-helix domain CPR_1583 PF01385 Probable transposase CPR_1583 PF07282 Putative transposase DNA-binding domain CPR_1585 PF09335 SNARE associated Golgi protein CPR_1587 PF01551 Peptidase family M23 CPR_1587 PF10145 Phage-related minor tail protein CPR_1587 PF01464 Transglycosylase SLT domain CPR_1590 PF06949 Protein of unknown function (DUF1292) CPR_1591 PF13538 UvrD-like helicase C-terminal domain CPR_1597 PF00271 Helicase conserved C-terminal domain CPR_1597 PF00176 SNF2 family N-terminal domain CPR_1597 PF04434 SWIM zinc finger CPR_1599 PF13407 Periplasmic binding protein domain CPR_1600 PF02653 Branched-chain amino acid transport system / permease component CPR_1601 PF00005 ABC transporter CPR_1602 PF05025 RbsD / FucU transport protein family CPR_1603 PF00294 pfkB family carbohydrate kinase CPR_1604 PF01327 Polypeptide deformylase CPR_1605 PF00953 Glycosyl transferase family 4 CPR_1607 PF01813 ATP synthase subunit D CPR_1608 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPR_1608 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPR_1609 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPR_1609 PF16886 ATPsynthase alpha/beta subunit N-term extension CPR_1609 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPR_1610 PF01990 ATP synthase (F/14-kDa) subunit CPR_1612 PF01991 ATP synthase (E/31 kDa) subunit CPR_1613 PF00137 ATP synthase subunit C CPR_1614 PF01496 V-type ATPase 116kDa subunit family CPR_1619 PF01943 Polysaccharide biosynthesis protein CPR_1619 PF14667 Polysaccharide biosynthesis C-terminal domain CPR_1622 PF00132 Bacterial transferase hexapeptide (six repeats) CPR_1625 PF01037 Lrp/AsnC ligand binding domain CPR_1625 PF13404 AsnC-type helix-turn-helix domain CPR_1626 PF04070 Domain of unknown function (DUF378) CPR_1631 PF07670 Nucleoside recognition CPR_1631 PF17910 FeoB cytosolic helical domain CPR_1631 PF07664 Ferrous iron transport protein B C terminus CPR_1631 PF02421 Ferrous iron transport protein B CPR_1633 PF00750 tRNA synthetases class I (R) CPR_1633 PF05746 DALR anticodon binding domain CPR_1633 PF03485 Arginyl tRNA synthetase N terminal domain CPR_1634 PF02541 Ppx/GppA phosphatase family CPR_1636 PF02163 Peptidase family M50 CPR_1637 PF02562 PhoH-like protein CPR_1637 PF13638 PIN domain CPR_1641 PF00381 PTS HPr component phosphorylation site CPR_1642 PF00155 Aminotransferase class I and II CPR_1643 PF04232 Stage V sporulation protein S (SpoVS) CPR_1644 PF01966 HD domain CPR_1644 PF12072 Domain of unknown function (DUF3552) CPR_1644 PF00013 KH domain CPR_1645 PF00154 recA bacterial DNA recombination protein CPR_1646 PF01066 CDP-alcohol phosphatidyltransferase CPR_1647 PF18693 TRAM domain CPR_1647 PF04055 Radical SAM superfamily CPR_1647 PF00919 Uncharacterized protein family UPF0004 CPR_1648 PF17854 FtsK alpha domain CPR_1648 PF01580 FtsK/SpoIIIE family CPR_1648 PF09397 Ftsk gamma domain CPR_1649 PF00574 Clp protease CPR_1650 PF00696 Amino acid kinase family CPR_1650 PF13840 ACT domain CPR_1652 PF00575 S1 RNA binding domain CPR_1652 PF01138 3' exoribonuclease family, domain 1 CPR_1652 PF03725 3' exoribonuclease family, domain 2 CPR_1652 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPR_1652 PF00013 KH domain CPR_1653 PF00312 Ribosomal protein S15 CPR_1654 PF06574 FAD synthetase CPR_1654 PF01687 Riboflavin kinase CPR_1655 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPR_1655 PF16198 tRNA pseudouridylate synthase B C-terminal domain CPR_1656 PF02272 DHHA1 domain CPR_1656 PF01368 DHH family CPR_1657 PF02033 Ribosome-binding factor A CPR_1658 PF00009 Elongation factor Tu GTP binding domain CPR_1658 PF11987 Translation-initiation factor 2 CPR_1658 PF04760 Translation initiation factor IF-2, N-terminal region CPR_1660 PF04296 Protein of unknown function (DUF448) CPR_1661 PF08529 NusA N-terminal domain CPR_1661 PF00575 S1 RNA binding domain CPR_1661 PF13184 NusA-like KH domain CPR_1662 PF17384 RimP C-terminal SH3 domain CPR_1662 PF02576 RimP N-terminal domain CPR_1663 PF11490 DNA polymerase III polC-type N-terminus II CPR_1663 PF02811 PHP domain CPR_1663 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPR_1663 PF14579 Helix-hairpin-helix motif CPR_1663 PF00929 Exonuclease CPR_1663 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPR_1664 PF04551 GcpE protein CPR_1665 PF02163 Peptidase family M50 CPR_1665 PF13180 PDZ domain CPR_1666 PF13288 DXP reductoisomerase C-terminal domain CPR_1666 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPR_1666 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPR_1668 PF01255 Putative undecaprenyl diphosphate synthase CPR_1669 PF01765 Ribosome recycling factor CPR_1670 PF00696 Amino acid kinase family CPR_1671 PF00889 Elongation factor TS CPR_1672 PF00318 Ribosomal protein S2 CPR_1673 PF06018 CodY GAF-like domain CPR_1673 PF08222 CodY helix-turn-helix domain CPR_1674 PF01131 DNA topoisomerase CPR_1674 PF01751 Toprim domain CPR_1674 PF01396 Topoisomerase DNA binding C4 zinc finger CPR_1675 PF02481 DNA recombination-mediator protein A CPR_1675 PF17782 DprA winged helix domain CPR_1676 PF01078 Magnesium chelatase, subunit ChlI CPR_1676 PF13335 Magnesium chelatase, subunit ChlI C-terminal CPR_1677 PF02021 Uncharacterised protein family UPF0102 CPR_1678 PF01351 Ribonuclease HII CPR_1679 PF01926 50S ribosome-binding GTPase CPR_1680 PF01245 Ribosomal protein L19 CPR_1681 PF01746 tRNA (Guanine-1)-methyltransferase CPR_1682 PF05239 PRC-barrel domain CPR_1682 PF01782 RimM N-terminal domain CPR_1684 PF00886 Ribosomal protein S16 CPR_1685 PF02881 SRP54-type protein, helical bundle domain CPR_1685 PF02978 Signal peptide binding domain CPR_1685 PF00448 SRP54-type protein, GTPase domain CPR_1686 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CPR_1687 PF00448 SRP54-type protein, GTPase domain CPR_1687 PF02881 SRP54-type protein, helical bundle domain CPR_1688 PF02463 RecF/RecN/SMC N terminal domain CPR_1688 PF06470 SMC proteins Flexible Hinge Domain CPR_1690 PF14622 Ribonuclease-III-like CPR_1690 PF00035 Double-stranded RNA binding motif CPR_1691 PF00550 Phosphopantetheine attachment site CPR_1692 PF02504 Fatty acid synthesis protein CPR_1693 PF01783 Ribosomal L32p protein family CPR_1695 PF00871 Acetokinase family CPR_1696 PF01515 Phosphate acetyl/butaryl transferase CPR_1697 PF05636 HIGH Nucleotidyl Transferase CPR_1700 PF01467 Cytidylyltransferase-like CPR_1702 PF17191 RecG wedge domain CPR_1702 PF00271 Helicase conserved C-terminal domain CPR_1702 PF00270 DEAD/DEAH box helicase CPR_1703 PF02734 DAK2 domain CPR_1703 PF13684 Dihydroxyacetone kinase family CPR_1705 PF00830 Ribosomal L28 family CPR_1707 PF00834 Ribulose-phosphate 3 epimerase family CPR_1708 PF16745 RsgA N-terminal domain CPR_1708 PF03193 RsgA GTPase CPR_1709 PF03793 PASTA domain CPR_1709 PF00069 Protein kinase domain CPR_1711 PF04055 Radical SAM superfamily CPR_1712 PF01029 NusB family CPR_1712 PF01189 16S rRNA methyltransferase RsmB/F CPR_1713 PF04298 Putative neutral zinc metallopeptidase CPR_1714 PF00551 Formyl transferase CPR_1714 PF02911 Formyl transferase, C-terminal domain CPR_1715 PF01327 Polypeptide deformylase CPR_1716 PF00271 Helicase conserved C-terminal domain CPR_1716 PF17764 3′ DNA-binding domain (3′BD) CPR_1716 PF18074 Primosomal protein N C-terminal domain CPR_1716 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPR_1716 PF04851 Type III restriction enzyme, res subunit CPR_1717 PF04127 DNA / pantothenate metabolism flavoprotein CPR_1717 PF02441 Flavoprotein CPR_1718 PF01192 RNA polymerase Rpb6 CPR_1719 PF00625 Guanylate kinase CPR_1720 PF04025 Domain of unknown function (DUF370) CPR_1721 PF03755 YicC-like family, N-terminal region CPR_1721 PF08340 Domain of unknown function (DUF1732) CPR_1722 PF00860 Permease family CPR_1723 PF17763 Glutaminase/Asparaginase C-terminal domain CPR_1723 PF00710 Asparaginase, N-terminal CPR_1725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPR_1725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPR_1726 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPR_1726 PF01926 50S ribosome-binding GTPase CPR_1727 PF13180 PDZ domain CPR_1728 PF16736 Single Cache-like CPR_1728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1728 PF00989 PAS fold CPR_1728 PF00512 His Kinase A (phospho-acceptor) domain CPR_1730 PF03477 ATP cone domain CPR_1731 PF05239 PRC-barrel domain CPR_1732 PF04542 Sigma-70 region 2 CPR_1732 PF04539 Sigma-70 region 3 CPR_1732 PF04545 Sigma-70, region 4 CPR_1733 PF04542 Sigma-70 region 2 CPR_1733 PF04545 Sigma-70, region 4 CPR_1735 PF12327 FtsZ family, C-terminal domain CPR_1735 PF00091 Tubulin/FtsZ family, GTPase domain CPR_1737 PF00437 Type II/IV secretion system protein CPR_1738 PF04542 Sigma-70 region 2 CPR_1738 PF04545 Sigma-70, region 4 CPR_1740 PF00485 Phosphoribulokinase / Uridine kinase family CPR_1743 PF02618 YceG-like family CPR_1745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPR_1745 PF00753 Metallo-beta-lactamase superfamily CPR_1745 PF17770 Ribonuclease J C-terminal domain CPR_1746 PF01475 Ferric uptake regulator family CPR_1747 PF06949 Protein of unknown function (DUF1292) CPR_1748 PF03652 Holliday junction resolvase CPR_1749 PF06135 IreB regulatory phosphoprotein CPR_1750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPR_1750 PF01411 tRNA synthetases class II (A) CPR_1750 PF02272 DHHA1 domain CPR_1751 PF01594 AI-2E family transporter CPR_1754 PF01592 NifU-like N terminal domain CPR_1755 PF00266 Aminotransferase class-V CPR_1756 PF02082 Transcriptional regulator CPR_1757 PF12002 MgsA AAA+ ATPase C terminal CPR_1757 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPR_1757 PF16193 AAA C-terminal domain CPR_1758 PF00990 Diguanylate cyclase, GGDEF domain CPR_1758 PF00072 Response regulator receiver domain CPR_1760 PF06463 Molybdenum Cofactor Synthesis C CPR_1760 PF04055 Radical SAM superfamily CPR_1761 PF02464 Competence-damaged protein CPR_1761 PF00994 Probable molybdopterin binding domain CPR_1762 PF12804 MobA-like NTP transferase domain CPR_1763 PF03454 MoeA C-terminal region (domain IV) CPR_1763 PF00994 Probable molybdopterin binding domain CPR_1763 PF03453 MoeA N-terminal region (domain I and II) CPR_1765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_1765 PF14759 Reductase C-terminal CPR_1767 PF01568 Molydopterin dinucleotide binding domain CPR_1767 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPR_1767 PF00384 Molybdopterin oxidoreductase CPR_1770 PF07943 Penicillin-binding protein 5, C-terminal domain CPR_1770 PF00768 D-alanyl-D-alanine carboxypeptidase CPR_1772 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CPR_1773 PF04079 Segregation and condensation complex subunit ScpB CPR_1774 PF02616 Segregation and condensation protein ScpA CPR_1775 PF00768 D-alanyl-D-alanine carboxypeptidase CPR_1775 PF07943 Penicillin-binding protein 5, C-terminal domain CPR_1776 PF02885 Glycosyl transferase family, helical bundle domain CPR_1776 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CPR_1776 PF00591 Glycosyl transferase family, a/b domain CPR_1777 PF02899 Phage integrase, N-terminal SAM-like domain CPR_1777 PF00589 Phage integrase family CPR_1779 PF00293 NUDIX domain CPR_1781 PF00072 Response regulator receiver domain CPR_1781 PF08769 Sporulation initiation factor Spo0A C terminal CPR_1782 PF17820 PDZ domain CPR_1782 PF05580 SpoIVB peptidase S55 CPR_1783 PF13476 AAA domain CPR_1784 PF01316 Arginine repressor, DNA binding domain CPR_1784 PF02863 Arginine repressor, C-terminal domain CPR_1785 PF01513 ATP-NAD kinase CPR_1786 PF01728 FtsJ-like methyltransferase CPR_1786 PF01479 S4 domain CPR_1787 PF02780 Transketolase, C-terminal domain CPR_1787 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPR_1787 PF02779 Transketolase, pyrimidine binding domain CPR_1788 PF00348 Polyprenyl synthetase CPR_1789 PF02609 Exonuclease VII small subunit CPR_1790 PF13742 OB-fold nucleic acid binding domain CPR_1790 PF02601 Exonuclease VII, large subunit CPR_1791 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPR_1791 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPR_1792 PF01029 NusB family CPR_1793 PF03780 Asp23 family, cell envelope-related function CPR_1797 PF09546 Stage III sporulation protein AE (spore_III_AE) CPR_1798 PF06686 Stage III sporulation protein AC/AD protein family CPR_1799 PF06686 Stage III sporulation protein AC/AD protein family CPR_1803 PF09285 Elongation factor P, C-terminal CPR_1803 PF08207 Elongation factor P (EF-P) KOW-like domain CPR_1803 PF01132 Elongation factor P (EF-P) OB domain CPR_1811 PF00482 Type II secretion system (T2SS), protein F CPR_1812 PF00437 Type II/IV secretion system protein CPR_1814 PF01678 Diaminopimelate epimerase CPR_1816 PF01170 Putative RNA methylase family UPF0020 CPR_1816 PF02926 THUMP domain CPR_1817 PF00156 Phosphoribosyl transferase domain CPR_1818 PF01479 S4 domain CPR_1818 PF00849 RNA pseudouridylate synthase CPR_1819 PF05103 DivIVA protein CPR_1821 PF04472 Cell division protein SepF CPR_1822 PF01168 Alanine racemase, N-terminal domain CPR_1823 PF05949 Bacterial protein of unknown function (DUF881) CPR_1824 PF06947 Protein of unknown function (DUF1290) CPR_1826 PF08478 POTRA domain, FtsQ-type CPR_1827 PF01098 Cell cycle protein CPR_1828 PF00953 Glycosyl transferase family 4 CPR_1829 PF08245 Mur ligase middle domain CPR_1829 PF01225 Mur ligase family, catalytic domain CPR_1829 PF02875 Mur ligase family, glutamate ligase domain CPR_1830 PF08245 Mur ligase middle domain CPR_1830 PF01225 Mur ligase family, catalytic domain CPR_1830 PF02875 Mur ligase family, glutamate ligase domain CPR_1831 PF03793 PASTA domain CPR_1831 PF00905 Penicillin binding protein transpeptidase domain CPR_1831 PF03717 Penicillin-binding Protein dimerisation domain CPR_1833 PF01795 MraW methylase family CPR_1835 PF01926 50S ribosome-binding GTPase CPR_1835 PF06071 Protein of unknown function (DUF933) CPR_1836 PF01522 Polysaccharide deacetylase CPR_1839 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPR_1841 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPR_1841 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPR_1841 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPR_1841 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPR_1842 PF07555 beta-N-acetylglucosaminidase CPR_1842 PF02838 Glycosyl hydrolase family 20, domain 2 CPR_1842 PF00754 F5/8 type C domain CPR_1842 PF00404 Dockerin type I domain CPR_1844 PF01070 FMN-dependent dehydrogenase CPR_1845 PF04463 Protein of unknown function (DUF523) CPR_1846 PF03793 PASTA domain CPR_1846 PF03717 Penicillin-binding Protein dimerisation domain CPR_1846 PF00905 Penicillin binding protein transpeptidase domain CPR_1847 PF01713 Smr domain CPR_1847 PF00488 MutS domain V CPR_1848 PF12392 Collagenase CPR_1848 PF01136 Peptidase family U32 CPR_1851 PF01588 Putative tRNA binding domain CPR_1851 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPR_1851 PF03147 Ferredoxin-fold anticodon binding domain CPR_1851 PF03484 tRNA synthetase B5 domain CPR_1851 PF03483 B3/4 domain CPR_1852 PF01409 tRNA synthetases class II core domain (F) CPR_1852 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPR_1853 PF00588 SpoU rRNA Methylase family CPR_1853 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPR_1854 PF02080 TrkA-C domain CPR_1854 PF02254 TrkA-N domain CPR_1855 PF02386 Cation transport protein CPR_1856 PF00453 Ribosomal protein L20 CPR_1857 PF01632 Ribosomal protein L35 CPR_1858 PF00707 Translation initiation factor IF-3, C-terminal domain CPR_1858 PF05198 Translation initiation factor IF-3, N-terminal domain CPR_1862 PF00293 NUDIX domain CPR_1868 PF01430 Hsp33 protein CPR_1869 PF13649 Methyltransferase domain CPR_1871 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPR_1871 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPR_1872 PF00701 Dihydrodipicolinate synthetase family CPR_1873 PF01113 Dihydrodipicolinate reductase, N-terminus CPR_1873 PF05173 Dihydrodipicolinate reductase, C-terminus CPR_1874 PF00155 Aminotransferase class I and II CPR_1875 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CPR_1875 PF12557 Cob(I)alamin adenosyltransferase N terminal CPR_1876 PF14602 Hexapeptide repeat of succinyl-transferase CPR_1876 PF00132 Bacterial transferase hexapeptide (six repeats) CPR_1876 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CPR_1878 PF01522 Polysaccharide deacetylase CPR_1880 PF01594 AI-2E family transporter CPR_1881 PF03816 Cell envelope-related transcriptional attenuator domain CPR_1882 PF03006 Haemolysin-III related CPR_1884 PF00654 Voltage gated chloride channel CPR_1885 PF08245 Mur ligase middle domain CPR_1885 PF02875 Mur ligase family, glutamate ligase domain CPR_1886 PF10458 Valyl tRNA synthetase tRNA binding arm CPR_1886 PF08264 Anticodon-binding domain of tRNA CPR_1886 PF00133 tRNA synthetases class I (I, L, M and V) CPR_1889 PF02631 RecX family CPR_1890 PF05193 Peptidase M16 inactive domain CPR_1890 PF00675 Insulinase (Peptidase family M16) CPR_1891 PF00072 Response regulator receiver domain CPR_1891 PF00486 Transcriptional regulatory protein, C terminal CPR_1892 PF18698 Histidine kinase sensor domain CPR_1892 PF00989 PAS fold CPR_1892 PF00512 His Kinase A (phospho-acceptor) domain CPR_1892 PF00672 HAMP domain CPR_1892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1895 PF00464 Serine hydroxymethyltransferase CPR_1896 PF06738 Putative threonine/serine exporter CPR_1898 PF02583 Metal-sensitive transcriptional repressor CPR_1899 PF01336 OB-fold nucleic acid binding domain CPR_1899 PF00152 tRNA synthetases class II (D, K and N) CPR_1899 PF02938 GAD domain CPR_1900 PF13393 Histidyl-tRNA synthetase CPR_1900 PF03129 Anticodon binding domain CPR_1901 PF04055 Radical SAM superfamily CPR_1902 PF00753 Metallo-beta-lactamase superfamily CPR_1903 PF02580 D-Tyr-tRNA(Tyr) deacylase CPR_1904 PF13291 ACT domain CPR_1904 PF04607 Region found in RelA / SpoT proteins CPR_1904 PF02824 TGS domain CPR_1905 PF00156 Phosphoribosyl transferase domain CPR_1907 PF02355 Protein export membrane protein CPR_1907 PF07549 SecD/SecF GG Motif CPR_1908 PF02355 Protein export membrane protein CPR_1908 PF07549 SecD/SecF GG Motif CPR_1911 PF02699 Preprotein translocase subunit CPR_1912 PF01702 Queuine tRNA-ribosyltransferase CPR_1913 PF02547 Queuosine biosynthesis protein CPR_1914 PF17864 RuvB AAA lid domain CPR_1914 PF05491 RuvB C-terminal winged helix domain CPR_1914 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPR_1915 PF01330 RuvA N terminal domain CPR_1915 PF07499 RuvA, C-terminal domain CPR_1917 PF00149 Calcineurin-like phosphoesterase CPR_1917 PF02872 5'-nucleotidase, C-terminal domain CPR_1918 PF02872 5'-nucleotidase, C-terminal domain CPR_1918 PF00149 Calcineurin-like phosphoesterase CPR_1921 PF00042 Globin CPR_1922 PF01709 Transcriptional regulator CPR_1923 PF09186 Domain of unknown function (DUF1949) CPR_1923 PF01205 Uncharacterized protein family UPF0029 CPR_1924 PF00155 Aminotransferase class I and II CPR_1927 PF01926 50S ribosome-binding GTPase CPR_1927 PF16360 GTP-binding GTPase Middle Region CPR_1927 PF13167 GTP-binding GTPase N-terminal CPR_1930 PF00905 Penicillin binding protein transpeptidase domain CPR_1930 PF00912 Transglycosylase CPR_1931 PF01235 Sodium:alanine symporter family CPR_1935 PF08402 TOBE domain CPR_1935 PF00005 ABC transporter CPR_1936 PF00528 Binding-protein-dependent transport system inner membrane component CPR_1937 PF00528 Binding-protein-dependent transport system inner membrane component CPR_1938 PF13416 Bacterial extracellular solute-binding protein CPR_1939 PF00334 Nucleoside diphosphate kinase CPR_1940 PF00708 Acylphosphatase CPR_1943 PF07943 Penicillin-binding protein 5, C-terminal domain CPR_1943 PF00768 D-alanyl-D-alanine carboxypeptidase CPR_1944 PF13419 Haloacid dehalogenase-like hydrolase CPR_1945 PF03590 Aspartate-ammonia ligase CPR_1947 PF03788 LrgA family CPR_1948 PF04172 LrgB-like family CPR_1950 PF01131 DNA topoisomerase CPR_1950 PF01751 Toprim domain CPR_1951 PF01979 Amidohydrolase family CPR_1952 PF03073 TspO/MBR family CPR_1953 PF00512 His Kinase A (phospho-acceptor) domain CPR_1953 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1954 PF00672 HAMP domain CPR_1954 PF00512 His Kinase A (phospho-acceptor) domain CPR_1954 PF00989 PAS fold CPR_1954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_1954 PF18698 Histidine kinase sensor domain CPR_1956 PF12146 Serine aminopeptidase, S33 CPR_1961 PF01121 Dephospho-CoA kinase CPR_1962 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPR_1962 PF00476 DNA polymerase family A CPR_1962 PF01367 5'-3' exonuclease, C-terminal SAM fold CPR_1963 PF04960 Glutaminase CPR_1965 PF02073 Thermophilic metalloprotease (M29) CPR_1967 PF12708 Pectate lyase superfamily protein CPR_1967 PF09992 Phosphodiester glycosidase CPR_1971 PF01156 Inosine-uridine preferring nucleoside hydrolase CPR_1972 PF01784 NIF3 (NGG1p interacting factor 3) CPR_1973 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CPR_1975 PF03979 Sigma-70 factor, region 1.1 CPR_1975 PF04542 Sigma-70 region 2 CPR_1975 PF04539 Sigma-70 region 3 CPR_1975 PF04545 Sigma-70, region 4 CPR_1975 PF00140 Sigma-70 factor, region 1.2 CPR_1976 PF01807 CHC2 zinc finger CPR_1976 PF08275 DNA primase catalytic core, N-terminal domain CPR_1976 PF10410 DnaB-helicase binding domain of primase CPR_1977 PF01966 HD domain CPR_1977 PF13286 Phosphohydrolase-associated domain CPR_1979 PF12704 MacB-like periplasmic core domain CPR_1979 PF02687 FtsX-like permease family CPR_1979 PF00005 ABC transporter CPR_1983 PF02896 PEP-utilising enzyme, TIM barrel domain CPR_1983 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CPR_1983 PF00391 PEP-utilising enzyme, mobile domain CPR_1984 PF00571 CBS domain CPR_1984 PF08279 HTH domain CPR_1986 PF11967 Recombination protein O N terminal CPR_1986 PF02565 Recombination protein O C terminal CPR_1987 PF07650 KH domain CPR_1987 PF01926 50S ribosome-binding GTPase CPR_1988 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPR_1989 PF01219 Prokaryotic diacylglycerol kinase CPR_1990 PF02130 Uncharacterized protein family UPF0054 CPR_1991 PF07697 7TM-HD extracellular CPR_1991 PF07698 7TM receptor with intracellular HD hydrolase CPR_1991 PF01966 HD domain CPR_1994 PF09424 Yqey-like protein CPR_1995 PF01165 Ribosomal protein S21 CPR_1996 PF01230 HIT domain CPR_1997 PF01938 TRAM domain CPR_1997 PF00919 Uncharacterized protein family UPF0004 CPR_1997 PF04055 Radical SAM superfamily CPR_1998 PF04452 RNA methyltransferase CPR_2000 PF00392 Bacterial regulatory proteins, gntR family CPR_2003 PF00005 ABC transporter CPR_2004 PF00684 DnaJ central domain CPR_2004 PF01556 DnaJ C terminal domain CPR_2004 PF00226 DnaJ domain CPR_2005 PF00012 Hsp70 protein CPR_2006 PF01025 GrpE CPR_2007 PF01628 HrcA protein C terminal domain CPR_2008 PF06969 HemN C-terminal domain CPR_2008 PF04055 Radical SAM superfamily CPR_2010 PF03144 Elongation factor Tu domain 2 CPR_2010 PF00679 Elongation factor G C-terminus CPR_2010 PF06421 GTP-binding protein LepA C-terminus CPR_2010 PF00009 Elongation factor Tu GTP binding domain CPR_2013 PF03418 Germination protease CPR_2014 PF01649 Ribosomal protein S20 CPR_2017 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPR_2018 PF07451 Stage V sporulation protein AD (SpoVAD) CPR_2019 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPR_2020 PF04542 Sigma-70 region 2 CPR_2020 PF04539 Sigma-70 region 3 CPR_2020 PF04545 Sigma-70, region 4 CPR_2021 PF13581 Histidine kinase-like ATPase domain CPR_2022 PF01740 STAS domain CPR_2023 PF05362 Lon protease (S16) C-terminal proteolytic domain CPR_2023 PF13654 AAA domain CPR_2024 PF01791 DeoC/LacD family aldolase CPR_2026 PF00689 Cation transporting ATPase, C-terminus CPR_2026 PF00690 Cation transporter/ATPase, N-terminus CPR_2027 PF07085 DRTGG domain CPR_2027 PF02833 DHHA2 domain CPR_2027 PF01368 DHH family CPR_2027 PF00571 CBS domain CPR_2029 PF00282 Pyridoxal-dependent decarboxylase conserved domain CPR_2030 PF10951 Protein of unknown function (DUF2776) CPR_2031 PF13520 Amino acid permease CPR_2032 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPR_2032 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPR_2032 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPR_2032 PF10371 Domain of unknown function CPR_2032 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPR_2034 PF04101 Glycosyltransferase family 28 C-terminal domain CPR_2034 PF03033 Glycosyltransferase family 28 N-terminal domain CPR_2035 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPR_2036 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CPR_2036 PF17768 RecJ OB domain CPR_2036 PF02272 DHHA1 domain CPR_2036 PF01368 DHH family CPR_2037 PF00675 Insulinase (Peptidase family M16) CPR_2037 PF05193 Peptidase M16 inactive domain CPR_2039 PF03989 DNA gyrase C-terminal domain, beta-propeller CPR_2039 PF00521 DNA gyrase/topoisomerase IV, subunit A CPR_2040 PF01751 Toprim domain CPR_2040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2040 PF00986 DNA gyrase B subunit, carboxyl terminus CPR_2040 PF00204 DNA gyrase B CPR_2041 PF00581 Rhodanese-like domain CPR_2043 PF03851 UV-endonuclease UvdE CPR_2044 PF02659 Putative manganese efflux pump CPR_2045 PF12241 Trans-2-enoyl-CoA reductase catalytic region CPR_2045 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CPR_2045 PF07055 Enoyl reductase FAD binding domain CPR_2046 PF13520 Amino acid permease CPR_2047 PF00480 ROK family CPR_2049 PF09261 Alpha mannosidase middle domain CPR_2049 PF07748 Glycosyl hydrolases family 38 C-terminal domain CPR_2049 PF01074 Glycosyl hydrolases family 38 N-terminal domain CPR_2050 PF00528 Binding-protein-dependent transport system inner membrane component CPR_2051 PF00528 Binding-protein-dependent transport system inner membrane component CPR_2052 PF01967 MoaC family CPR_2053 PF00528 Binding-protein-dependent transport system inner membrane component CPR_2055 PF00994 Probable molybdopterin binding domain CPR_2056 PF00072 Response regulator receiver domain CPR_2056 PF12833 Helix-turn-helix domain CPR_2057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2057 PF00672 HAMP domain CPR_2057 PF06580 Histidine kinase CPR_2057 PF02743 Cache domain CPR_2059 PF02388 FemAB family CPR_2060 PF03551 Transcriptional regulator PadR-like family CPR_2061 PF00005 ABC transporter CPR_2062 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPR_2065 PF04456 Protein of unknown function (DUF503) CPR_2074 PF00892 EamA-like transporter family CPR_2075 PF02954 Bacterial regulatory protein, Fis family CPR_2075 PF13426 PAS domain CPR_2075 PF00158 Sigma-54 interaction domain CPR_2076 PF00512 His Kinase A (phospho-acceptor) domain CPR_2076 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2076 PF00672 HAMP domain CPR_2077 PF00486 Transcriptional regulatory protein, C terminal CPR_2077 PF00072 Response regulator receiver domain CPR_2079 PF00005 ABC transporter CPR_2080 PF02687 FtsX-like permease family CPR_2080 PF12704 MacB-like periplasmic core domain CPR_2082 PF05958 tRNA (Uracil-5-)-methyltransferase CPR_2084 PF09107 Elongation factor SelB, winged helix CPR_2084 PF09106 Elongation factor SelB, winged helix CPR_2084 PF09105 Elongation factor SelB, winged helix CPR_2084 PF00009 Elongation factor Tu GTP binding domain CPR_2084 PF03144 Elongation factor Tu domain 2 CPR_2085 PF03841 L-seryl-tRNA selenium transferase CPR_2087 PF10531 SLBB domain CPR_2088 PF07943 Penicillin-binding protein 5, C-terminal domain CPR_2088 PF00768 D-alanyl-D-alanine carboxypeptidase CPR_2089 PF00849 RNA pseudouridylate synthase CPR_2090 PF03816 Cell envelope-related transcriptional attenuator domain CPR_2091 PF01966 HD domain CPR_2092 PF01467 Cytidylyltransferase-like CPR_2093 PF01985 CRS1 / YhbY (CRM) domain CPR_2094 PF01926 50S ribosome-binding GTPase CPR_2094 PF01018 GTP1/OBG CPR_2094 PF09269 Domain of unknown function (DUF1967) CPR_2095 PF01016 Ribosomal L27 protein CPR_2097 PF00829 Ribosomal prokaryotic L21 protein CPR_2098 PF00575 S1 RNA binding domain CPR_2098 PF10150 Ribonuclease E/G family CPR_2101 PF02163 Peptidase family M50 CPR_2103 PF01098 Cell cycle protein CPR_2104 PF03776 Septum formation topological specificity factor MinE CPR_2105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPR_2106 PF03775 Septum formation inhibitor MinC, C-terminal domain CPR_2111 PF04002 RadC-like JAB domain CPR_2112 PF02545 Maf-like protein CPR_2114 PF02811 PHP domain CPR_2115 PF01546 Peptidase family M20/M25/M40 CPR_2115 PF07687 Peptidase dimerisation domain CPR_2116 PF02887 Pyruvate kinase, alpha/beta domain CPR_2116 PF00224 Pyruvate kinase, barrel domain CPR_2117 PF00575 S1 RNA binding domain CPR_2119 PF03883 Peroxide stress protein YaaA CPR_2123 PF05192 MutS domain III CPR_2123 PF05188 MutS domain II CPR_2123 PF01624 MutS domain I CPR_2123 PF00488 MutS domain V CPR_2123 PF05190 MutS family domain IV CPR_2124 PF02378 Phosphotransferase system, EIIC CPR_2124 PF00367 phosphotransferase system, EIIB CPR_2124 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPR_2125 PF01297 Zinc-uptake complex component A periplasmic CPR_2126 PF13514 AAA domain CPR_2128 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPR_2132 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPR_2133 PF00814 Glycoprotease family CPR_2134 PF00583 Acetyltransferase (GNAT) family CPR_2135 PF12822 ECF transporter, substrate-specific component CPR_2136 PF00575 S1 RNA binding domain CPR_2136 PF16921 Tex protein YqgF-like domain CPR_2136 PF09371 Tex-like protein N-terminal domain CPR_2136 PF17674 HHH domain CPR_2137 PF04389 Peptidase family M28 CPR_2137 PF02225 PA domain CPR_2139 PF07516 SecA Wing and Scaffold domain CPR_2139 PF02810 SEC-C motif CPR_2139 PF07517 SecA DEAD-like domain CPR_2139 PF01043 SecA preprotein cross-linking domain CPR_2140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPR_2140 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CPR_2143 PF13538 UvrD-like helicase C-terminal domain CPR_2143 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CPR_2143 PF14490 Helix-hairpin-helix containing domain CPR_2144 PF01979 Amidohydrolase family CPR_2145 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPR_2145 PF02772 S-adenosylmethionine synthetase, central domain CPR_2145 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPR_2156 PF12116 Stage III sporulation protein D CPR_2157 PF01551 Peptidase family M23 CPR_2157 PF01476 LysM domain CPR_2158 PF08486 Stage II sporulation protein CPR_2159 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPR_2161 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPR_2161 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CPR_2162 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPR_2162 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPR_2163 PF00231 ATP synthase CPR_2164 PF00306 ATP synthase alpha/beta chain, C terminal domain CPR_2164 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPR_2164 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPR_2165 PF00213 ATP synthase delta (OSCP) subunit CPR_2166 PF00430 ATP synthase B/B' CF(0) CPR_2167 PF00137 ATP synthase subunit C CPR_2168 PF00119 ATP synthase A chain CPR_2170 PF00108 Thiolase, N-terminal domain CPR_2170 PF02803 Thiolase, C-terminal domain CPR_2171 PF02350 UDP-N-acetylglucosamine 2-epimerase CPR_2173 PF02502 Ribose/Galactose Isomerase CPR_2174 PF01300 Telomere recombination CPR_2174 PF03481 Putative GTP-binding controlling metal-binding CPR_2176 PF00472 RF-1 domain CPR_2176 PF03462 PCRF domain CPR_2177 PF05175 Methyltransferase small domain CPR_2177 PF17827 PrmC N-terminal domain CPR_2178 PF00265 Thymidine kinase CPR_2179 PF01197 Ribosomal protein L31 CPR_2180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CPR_2180 PF04101 Glycosyltransferase family 28 C-terminal domain CPR_2181 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPR_2181 PF07497 Rho termination factor, RNA-binding domain CPR_2181 PF07498 Rho termination factor, N-terminal domain CPR_2182 PF06418 CTP synthase N-terminus CPR_2182 PF00117 Glutamine amidotransferase class-I CPR_2183 PF09148 Domain of unknown function (DUF1934) CPR_2185 PF09551 Stage II sporulation protein R (spore_II_R) CPR_2186 PF08544 GHMP kinases C terminal CPR_2186 PF00288 GHMP kinases N terminal domain CPR_2187 PF08245 Mur ligase middle domain CPR_2187 PF08443 RimK-like ATP-grasp domain CPR_2187 PF02875 Mur ligase family, glutamate ligase domain CPR_2188 PF03575 Peptidase family S51 CPR_2189 PF01476 LysM domain CPR_2190 PF06257 Biofilm formation stimulator VEG CPR_2191 PF05582 YabG peptidase U57 CPR_2193 PF00534 Glycosyl transferases group 1 CPR_2197 PF00534 Glycosyl transferases group 1 CPR_2197 PF13439 Glycosyltransferase Family 4 CPR_2198 PF04346 Ethanolamine utilisation protein, EutH CPR_2199 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPR_2200 PF13180 PDZ domain CPR_2202 PF00814 Glycoprotease family CPR_2205 PF13192 Thioredoxin domain CPR_2205 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_2206 PF01206 Sulfurtransferase TusA CPR_2207 PF00884 Sulfatase CPR_2209 PF16736 Single Cache-like CPR_2209 PF00989 PAS fold CPR_2209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2209 PF00512 His Kinase A (phospho-acceptor) domain CPR_2210 PF00072 Response regulator receiver domain CPR_2210 PF00486 Transcriptional regulatory protein, C terminal CPR_2214 PF02417 Chromate transporter CPR_2216 PF07687 Peptidase dimerisation domain CPR_2216 PF01546 Peptidase family M20/M25/M40 CPR_2239 PF01725 Ham1 family CPR_2240 PF03725 3' exoribonuclease family, domain 2 CPR_2240 PF01138 3' exoribonuclease family, domain 1 CPR_2242 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPR_2245 PF00533 BRCA1 C Terminus (BRCT) domain CPR_2245 PF12826 Helix-hairpin-helix motif CPR_2245 PF03120 NAD-dependent DNA ligase OB-fold domain CPR_2245 PF01653 NAD-dependent DNA ligase adenylation domain CPR_2246 PF13361 UvrD-like helicase C-terminal domain CPR_2246 PF00580 UvrD/REP helicase N-terminal domain CPR_2249 PF00849 RNA pseudouridylate synthase CPR_2249 PF01479 S4 domain CPR_2251 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CPR_2252 PF00342 Phosphoglucose isomerase CPR_2254 PF00005 ABC transporter CPR_2254 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPR_2255 PF00005 ABC transporter CPR_2255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPR_2257 PF00528 Binding-protein-dependent transport system inner membrane component CPR_2258 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPR_2259 PF07690 Major Facilitator Superfamily CPR_2260 PF02540 NAD synthase CPR_2260 PF00958 GMP synthase C terminal domain CPR_2260 PF00117 Glutamine amidotransferase class-I CPR_2261 PF00478 IMP dehydrogenase / GMP reductase domain CPR_2261 PF00571 CBS domain CPR_2271 PF00482 Type II secretion system (T2SS), protein F CPR_2272 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CPR_2272 PF00437 Type II/IV secretion system protein CPR_2273 PF01478 Type IV leader peptidase family CPR_2273 PF06750 Bacterial Peptidase A24 N-terminal domain CPR_2274 PF07963 Prokaryotic N-terminal methylation motif CPR_2275 PF00118 TCP-1/cpn60 chaperonin family CPR_2276 PF00166 Chaperonin 10 Kd subunit CPR_2282 PF00664 ABC transporter transmembrane region CPR_2282 PF00005 ABC transporter CPR_2283 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPR_2283 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CPR_2284 PF00766 Electron transfer flavoprotein FAD-binding domain CPR_2284 PF01012 Electron transfer flavoprotein domain CPR_2285 PF01012 Electron transfer flavoprotein domain CPR_2286 PF02770 Acyl-CoA dehydrogenase, middle domain CPR_2286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPR_2286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPR_2287 PF00378 Enoyl-CoA hydratase/isomerase CPR_2288 PF06971 Putative DNA-binding protein N-terminus CPR_2288 PF02629 CoA binding domain CPR_2289 PF00403 Heavy-metal-associated domain CPR_2290 PF01022 Bacterial regulatory protein, arsR family CPR_2294 PF01050 Mannose-6-phosphate isomerase CPR_2294 PF00483 Nucleotidyl transferase CPR_2295 PF00232 Glycosyl hydrolase family 1 CPR_2296 PF00171 Aldehyde dehydrogenase family CPR_2298 PF12146 Serine aminopeptidase, S33 CPR_2299 PF01479 S4 domain CPR_2299 PF00849 RNA pseudouridylate synthase CPR_2301 PF04203 Sortase domain CPR_2302 PF02542 YgbB family CPR_2303 PF03553 Na+/H+ antiporter family CPR_2317 PF03129 Anticodon binding domain CPR_2317 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPR_2317 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPR_2317 PF02824 TGS domain CPR_2319 PF01812 5-formyltetrahydrofolate cyclo-ligase family CPR_2322 PF01380 SIS domain CPR_2324 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPR_2324 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPR_2324 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPR_2324 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPR_2326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2326 PF00672 HAMP domain CPR_2326 PF18698 Histidine kinase sensor domain CPR_2326 PF00989 PAS fold CPR_2326 PF00512 His Kinase A (phospho-acceptor) domain CPR_2327 PF00486 Transcriptional regulatory protein, C terminal CPR_2327 PF00072 Response regulator receiver domain CPR_2329 PF01371 Trp repressor protein CPR_2332 PF00343 Carbohydrate phosphorylase CPR_2333 PF02446 4-alpha-glucanotransferase CPR_2334 PF01055 Glycosyl hydrolases family 31 CPR_2334 PF16338 Domain of unknown function (DUF4968) CPR_2334 PF17137 Domain of unknown function (DUF5110) CPR_2334 PF13802 Galactose mutarotase-like CPR_2335 PF00356 Bacterial regulatory proteins, lacI family CPR_2336 PF00528 Binding-protein-dependent transport system inner membrane component CPR_2337 PF14785 Maltose transport system permease protein MalF P2 domain CPR_2337 PF00528 Binding-protein-dependent transport system inner membrane component CPR_2338 PF13416 Bacterial extracellular solute-binding protein CPR_2339 PF05651 Putative sugar diacid recognition CPR_2339 PF17853 GGDEF-like domain CPR_2339 PF13556 PucR C-terminal helix-turn-helix domain CPR_2340 PF03459 TOBE domain CPR_2340 PF00005 ABC transporter CPR_2340 PF17912 MalK OB fold domain CPR_2341 PF12838 4Fe-4S dicluster domain CPR_2341 PF02256 Iron hydrogenase small subunit CPR_2341 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPR_2342 PF00871 Acetokinase family CPR_2343 PF01515 Phosphate acetyl/butaryl transferase CPR_2346 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPR_2348 PF01471 Putative peptidoglycan binding domain CPR_2348 PF07486 Cell Wall Hydrolase CPR_2349 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_2350 PF00085 Thioredoxin CPR_2351 PF01979 Amidohydrolase family CPR_2352 PF02896 PEP-utilising enzyme, TIM barrel domain CPR_2352 PF00391 PEP-utilising enzyme, mobile domain CPR_2352 PF05524 PEP-utilising enzyme, N-terminal CPR_2353 PF00158 Sigma-54 interaction domain CPR_2353 PF00989 PAS fold CPR_2353 PF02954 Bacterial regulatory protein, Fis family CPR_2354 PF01479 S4 domain CPR_2354 PF00163 Ribosomal protein S4/S9 N-terminal domain CPR_2355 PF00268 Ribonucleotide reductase, small chain CPR_2356 PF02867 Ribonucleotide reductase, barrel domain CPR_2356 PF03477 ATP cone domain CPR_2356 PF00317 Ribonucleotide reductase, all-alpha domain CPR_2357 PF03960 ArsC family CPR_2358 PF00512 His Kinase A (phospho-acceptor) domain CPR_2358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2359 PF00486 Transcriptional regulatory protein, C terminal CPR_2359 PF00072 Response regulator receiver domain CPR_2360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPR_2360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPR_2361 PF01520 N-acetylmuramoyl-L-alanine amidase CPR_2362 PF02690 Na+/Pi-cotransporter CPR_2363 PF00380 Ribosomal protein S9/S16 CPR_2364 PF00572 Ribosomal protein L13 CPR_2365 PF01416 tRNA pseudouridine synthase CPR_2366 PF02361 Cobalt transport protein CPR_2369 PF01196 Ribosomal protein L17 CPR_2370 PF01000 RNA polymerase Rpb3/RpoA insert domain CPR_2370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPR_2370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPR_2371 PF01479 S4 domain CPR_2371 PF00163 Ribosomal protein S4/S9 N-terminal domain CPR_2372 PF00411 Ribosomal protein S11 CPR_2373 PF00416 Ribosomal protein S13/S18 CPR_2374 PF00444 Ribosomal protein L36 CPR_2375 PF01176 Translation initiation factor 1A / IF-1 CPR_2377 PF00557 Metallopeptidase family M24 CPR_2378 PF05191 Adenylate kinase, active site lid CPR_2379 PF00344 SecY translocase CPR_2380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPR_2381 PF00327 Ribosomal protein L30p/L7e CPR_2382 PF00333 Ribosomal protein S5, N-terminal domain CPR_2382 PF03719 Ribosomal protein S5, C-terminal domain CPR_2383 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPR_2384 PF00347 Ribosomal protein L6 CPR_2385 PF00410 Ribosomal protein S8 CPR_2386 PF00253 Ribosomal protein S14p/S29e CPR_2387 PF00281 Ribosomal protein L5 CPR_2387 PF00673 ribosomal L5P family C-terminus CPR_2388 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPR_2388 PF00467 KOW motif CPR_2389 PF00238 Ribosomal protein L14p/L23e CPR_2390 PF00366 Ribosomal protein S17 CPR_2391 PF00831 Ribosomal L29 protein CPR_2392 PF00252 Ribosomal protein L16p/L10e CPR_2393 PF07650 KH domain CPR_2393 PF00189 Ribosomal protein S3, C-terminal domain CPR_2394 PF00237 Ribosomal protein L22p/L17e CPR_2395 PF00203 Ribosomal protein S19 CPR_2396 PF03947 Ribosomal Proteins L2, C-terminal domain CPR_2396 PF00181 Ribosomal Proteins L2, RNA binding domain CPR_2397 PF00276 Ribosomal protein L23 CPR_2398 PF00573 Ribosomal protein L4/L1 family CPR_2399 PF00297 Ribosomal protein L3 CPR_2400 PF00338 Ribosomal protein S10p/S20e CPR_2401 PF13936 Helix-turn-helix domain CPR_2402 PF00009 Elongation factor Tu GTP binding domain CPR_2402 PF03144 Elongation factor Tu domain 2 CPR_2402 PF03143 Elongation factor Tu C-terminal domain CPR_2403 PF14492 Elongation Factor G, domain II CPR_2403 PF00679 Elongation factor G C-terminus CPR_2403 PF03764 Elongation factor G, domain IV CPR_2403 PF00009 Elongation factor Tu GTP binding domain CPR_2403 PF03144 Elongation factor Tu domain 2 CPR_2404 PF00177 Ribosomal protein S7p/S5e CPR_2405 PF00164 Ribosomal protein S12/S23 CPR_2406 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CPR_2407 PF04983 RNA polymerase Rpb1, domain 3 CPR_2407 PF04997 RNA polymerase Rpb1, domain 1 CPR_2407 PF05000 RNA polymerase Rpb1, domain 4 CPR_2407 PF00623 RNA polymerase Rpb1, domain 2 CPR_2407 PF04998 RNA polymerase Rpb1, domain 5 CPR_2408 PF04560 RNA polymerase Rpb2, domain 7 CPR_2408 PF00562 RNA polymerase Rpb2, domain 6 CPR_2408 PF04563 RNA polymerase beta subunit CPR_2408 PF10385 RNA polymerase beta subunit external 1 domain CPR_2408 PF04561 RNA polymerase Rpb2, domain 2 CPR_2408 PF04565 RNA polymerase Rpb2, domain 3 CPR_2409 PF16320 Ribosomal protein L7/L12 dimerisation domain CPR_2409 PF00542 Ribosomal protein L7/L12 C-terminal domain CPR_2410 PF00466 Ribosomal protein L10 CPR_2411 PF00687 Ribosomal protein L1p/L10e family CPR_2412 PF00298 Ribosomal protein L11, RNA binding domain CPR_2412 PF03946 Ribosomal protein L11, N-terminal domain CPR_2413 PF00467 KOW motif CPR_2413 PF02357 Transcription termination factor nusG CPR_2414 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CPR_2415 PF00471 Ribosomal protein L33 CPR_2416 PF00009 Elongation factor Tu GTP binding domain CPR_2416 PF03144 Elongation factor Tu domain 2 CPR_2416 PF03143 Elongation factor Tu C-terminal domain CPR_2418 PF08281 Sigma-70, region 4 CPR_2418 PF04542 Sigma-70 region 2 CPR_2420 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPR_2420 PF00588 SpoU rRNA Methylase family CPR_2421 PF02511 Thymidylate synthase complementing protein CPR_2422 PF00636 Ribonuclease III domain CPR_2424 PF01406 tRNA synthetases class I (C) catalytic domain CPR_2424 PF09190 DALR domain CPR_2425 PF03129 Anticodon binding domain CPR_2425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPR_2425 PF04073 Aminoacyl-tRNA editing domain CPR_2426 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPR_2429 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPR_2429 PF10635 DisA bacterial checkpoint controller linker region CPR_2430 PF18073 Rubredoxin metal binding domain CPR_2431 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPR_2433 PF00462 Glutaredoxin CPR_2434 PF00171 Aldehyde dehydrogenase family CPR_2436 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_2437 PF17871 AAA lid domain CPR_2437 PF07724 AAA domain (Cdc48 subfamily) CPR_2437 PF00004 ATPase family associated with various cellular activities (AAA) CPR_2437 PF10431 C-terminal, D2-small domain, of ClpB protein CPR_2437 PF02861 Clp amino terminal domain, pathogenicity island component CPR_2438 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CPR_2440 PF17727 CtsR C-terminal dimerization domain CPR_2440 PF05848 CtsR N-terminal HTH domain CPR_2442 PF12838 4Fe-4S dicluster domain CPR_2443 PF04468 PSP1 C-terminal conserved region CPR_2444 PF09115 DNA polymerase III, delta subunit, C terminal CPR_2445 PF06153 Cyclic-di-AMP receptor CPR_2448 PF01276 Orn/Lys/Arg decarboxylase, major domain CPR_2448 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPR_2453 PF02016 LD-carboxypeptidase N-terminal domain CPR_2453 PF17676 LD-carboxypeptidase C-terminal domain CPR_2461 PF08245 Mur ligase middle domain CPR_2462 PF04055 Radical SAM superfamily CPR_2462 PF06968 Biotin and Thiamin Synthesis associated domain CPR_2463 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPR_2463 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_2464 PF02016 LD-carboxypeptidase N-terminal domain CPR_2464 PF17676 LD-carboxypeptidase C-terminal domain CPR_2465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPR_2465 PF03129 Anticodon binding domain CPR_2467 PF01336 OB-fold nucleic acid binding domain CPR_2467 PF00152 tRNA synthetases class II (D, K and N) CPR_2468 PF01272 Transcription elongation factor, GreA/GreB, C-term CPR_2468 PF03449 Transcription elongation factor, N-terminal CPR_2469 PF01207 Dihydrouridine synthase (Dus) CPR_2470 PF03309 Type III pantothenate kinase CPR_2471 PF01268 Formate--tetrahydrofolate ligase CPR_2472 PF01434 Peptidase family M41 CPR_2472 PF17862 AAA+ lid domain CPR_2472 PF00004 ATPase family associated with various cellular activities (AAA) CPR_2474 PF11734 TilS substrate C-terminal domain CPR_2474 PF01171 PP-loop family CPR_2483 PF00575 S1 RNA binding domain CPR_2487 PF01479 S4 domain CPR_2488 PF00216 Bacterial DNA-binding protein CPR_2489 PF03819 MazG nucleotide pyrophosphohydrolase domain CPR_2489 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPR_2490 PF01943 Polysaccharide biosynthesis protein CPR_2490 PF14667 Polysaccharide biosynthesis C-terminal domain CPR_2491 PF15714 Stage V sporulation protein T C-terminal, transcription factor CPR_2491 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPR_2492 PF13145 PPIC-type PPIASE domain CPR_2493 PF00270 DEAD/DEAH box helicase CPR_2493 PF02559 CarD-like/TRCF domain CPR_2493 PF03461 TRCF domain CPR_2493 PF17757 UvrB interaction domain CPR_2493 PF00271 Helicase conserved C-terminal domain CPR_2494 PF01195 Peptidyl-tRNA hydrolase CPR_2495 PF13180 PDZ domain CPR_2496 PF00672 HAMP domain CPR_2496 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPR_2496 PF00512 His Kinase A (phospho-acceptor) domain CPR_2497 PF00486 Transcriptional regulatory protein, C terminal CPR_2497 PF00072 Response regulator receiver domain CPR_2498 PF14572 Phosphoribosyl synthetase-associated domain CPR_2498 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPR_2499 PF00483 Nucleotidyl transferase CPR_2499 PF00132 Bacterial transferase hexapeptide (six repeats) CPR_2500 PF04026 SpoVG CPR_2501 PF00156 Phosphoribosyl transferase domain CPR_2501 PF09182 Bacterial purine repressor, N-terminal CPR_2502 PF01225 Mur ligase family, catalytic domain CPR_2502 PF02875 Mur ligase family, glutamate ligase domain CPR_2502 PF08245 Mur ligase middle domain CPR_2503 PF00356 Bacterial regulatory proteins, lacI family CPR_2504 PF01048 Phosphorylase superfamily CPR_2505 PF07670 Nucleoside recognition CPR_2505 PF01773 Na+ dependent nucleoside transporter N-terminus CPR_2505 PF07662 Na+ dependent nucleoside transporter C-terminus CPR_2506 PF00557 Metallopeptidase family M24 CPR_2506 PF01321 Creatinase/Prolidase N-terminal domain CPR_2509 PF00152 tRNA synthetases class II (D, K and N) CPR_2509 PF01336 OB-fold nucleic acid binding domain CPR_2510 PF02789 Cytosol aminopeptidase family, N-terminal domain CPR_2510 PF00883 Cytosol aminopeptidase family, catalytic domain CPR_2514 PF01554 MatE CPR_2515 PF00962 Adenosine/AMP deaminase CPR_2516 PF03477 ATP cone domain CPR_2516 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPR_2517 PF17479 Protein of unknown function (DUF3048) C-terminal domain CPR_2517 PF11258 Protein of unknown function (DUF3048) N-terminal domain CPR_2518 PF02645 Uncharacterised protein, DegV family COG1307 CPR_2519 PF03551 Transcriptional regulator PadR-like family CPR_2519 PF10400 Virulence activator alpha C-term CPR_2521 PF10609 NUBPL iron-transfer P-loop NTPase CPR_2523 PF01790 Prolipoprotein diacylglyceryl transferase CPR_2526 PF00398 Ribosomal RNA adenine dimethylase CPR_2527 PF01751 Toprim domain CPR_2527 PF13331 Domain of unknown function (DUF4093) CPR_2528 PF06725 3D domain CPR_2528 PF03990 G5-linked-Ubiquitin-like domain CPR_2528 PF07501 G5 domain CPR_2529 PF01026 TatD related DNase CPR_2530 PF04286 Protein of unknown function (DUF445) CPR_2532 PF09334 tRNA synthetases class I (M) CPR_2533 PF09334 tRNA synthetases class I (M) CPR_2533 PF01588 Putative tRNA binding domain CPR_2536 PF03553 Na+/H+ antiporter family CPR_2537 PF03109 ABC1 family CPR_2539 PF00557 Metallopeptidase family M24 CPR_2539 PF05195 Aminopeptidase P, N-terminal domain CPR_2540 PF00465 Iron-containing alcohol dehydrogenase CPR_2540 PF00171 Aldehyde dehydrogenase family CPR_2541 PF07670 Nucleoside recognition CPR_2542 PF07670 Nucleoside recognition CPR_2544 PF01554 MatE CPR_2546 PF11412 Disulphide bond corrector protein DsbC CPR_2546 PF02683 Cytochrome C biogenesis protein transmembrane region CPR_2548 PF00356 Bacterial regulatory proteins, lacI family CPR_2549 PF00581 Rhodanese-like domain CPR_2550 PF00133 tRNA synthetases class I (I, L, M and V) CPR_2550 PF08264 Anticodon-binding domain of tRNA CPR_2553 PF00005 ABC transporter CPR_2553 PF12848 ABC transporter CPR_2553 PF16326 ABC transporter C-terminal domain CPR_2555 PF10672 S-adenosylmethionine-dependent methyltransferase CPR_2555 PF17785 PUA-like domain CPR_2557 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPR_2557 PF04324 BFD-like [2Fe-2S] binding domain CPR_2558 PF01266 FAD dependent oxidoreductase CPR_2559 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPR_2559 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPR_2560 PF04309 Glycerol-3-phosphate responsive antiterminator CPR_2561 PF00230 Major intrinsic protein CPR_2562 PF04029 2-phosphosulpholactate phosphatase CPR_2563 PF16199 Radical_SAM C-terminal domain CPR_2563 PF04055 Radical SAM superfamily CPR_2567 PF00082 Subtilase family CPR_2567 PF02225 PA domain CPR_2567 PF05922 Peptidase inhibitor I9 CPR_2567 PF13860 FlgD Ig-like domain CPR_2570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPR_2572 PF01177 Asp/Glu/Hydantoin racemase CPR_2573 PF03951 Glutamine synthetase, beta-Grasp domain CPR_2573 PF00120 Glutamine synthetase, catalytic domain CPR_2576 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPR_2576 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPR_2576 PF02142 MGS-like domain CPR_2577 PF00117 Glutamine amidotransferase class-I CPR_2577 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPR_2579 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPR_2579 PF00037 4Fe-4S binding domain CPR_2580 PF02245 Methylpurine-DNA glycosylase (MPG) CPR_2581 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CPR_2582 PF00171 Aldehyde dehydrogenase family CPR_2583 PF00696 Amino acid kinase family CPR_2585 PF00106 short chain dehydrogenase CPR_2586 PF00860 Permease family CPR_2587 PF03063 Prismane/CO dehydrogenase family CPR_2590 PF14602 Hexapeptide repeat of succinyl-transferase CPR_2590 PF12464 Maltose acetyltransferase CPR_2591 PF01625 Peptide methionine sulfoxide reductase CPR_2593 PF01061 ABC-2 type transporter CPR_2594 PF01061 ABC-2 type transporter CPR_2595 PF03831 PhnA domain CPR_2595 PF08274 PhnA Zinc-Ribbon CPR_2599 PF02590 Predicted SPOUT methyltransferase CPR_2600 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CPR_2601 PF02378 Phosphotransferase system, EIIC CPR_2602 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPR_2603 PF00232 Glycosyl hydrolase family 1 CPR_2605 PF00480 ROK family CPR_2606 PF00356 Bacterial regulatory proteins, lacI family CPR_2607 PF00722 Glycosyl hydrolases family 16 CPR_2610 PF02590 Predicted SPOUT methyltransferase CPR_2613 PF02810 SEC-C motif CPR_2613 PF07517 SecA DEAD-like domain CPR_2613 PF01043 SecA preprotein cross-linking domain CPR_2613 PF07516 SecA Wing and Scaffold domain CPR_2615 PF00753 Metallo-beta-lactamase superfamily CPR_2616 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPR_2620 PF04151 Bacterial pre-peptidase C-terminal domain CPR_2620 PF00082 Subtilase family CPR_2621 PF01464 Transglycosylase SLT domain CPR_2621 PF10145 Phage-related minor tail protein CPR_2621 PF01551 Peptidase family M23 CPR_2638 PF02915 Rubrerythrin CPR_2640 PF00293 NUDIX domain CPR_2641 PF00709 Adenylosuccinate synthetase CPR_2642 PF01842 ACT domain CPR_2642 PF03315 Serine dehydratase beta chain CPR_2643 PF03313 Serine dehydratase alpha chain CPR_2644 PF01380 SIS domain CPR_2645 PF01116 Fructose-bisphosphate aldolase class-II CPR_2647 PF03807 NADP oxidoreductase coenzyme F420-dependent CPR_2647 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPR_2648 PF03796 DnaB-like helicase C terminal domain CPR_2648 PF00772 DnaB-like helicase N terminal domain CPR_2649 PF00004 ATPase family associated with various cellular activities (AAA) CPR_2649 PF05362 Lon protease (S16) C-terminal proteolytic domain CPR_2650 PF03948 Ribosomal protein L9, C-terminal domain CPR_2650 PF01281 Ribosomal protein L9, N-terminal domain CPR_2651 PF02272 DHHA1 domain CPR_2651 PF01368 DHH family CPR_2652 PF09991 Predicted membrane protein (DUF2232) CPR_2654 PF01084 Ribosomal protein S18 CPR_2655 PF00436 Single-strand binding protein family CPR_2656 PF01250 Ribosomal protein S6 CPR_2658 PF00924 Mechanosensitive ion channel CPR_2661 PF00266 Aminotransferase class-V CPR_2663 PF06866 Protein of unknown function (DUF1256) CPR_2665 PF17762 HTH domain found in ParB protein CPR_2665 PF02195 ParB-like nuclease domain CPR_2666 PF13614 AAA domain CPR_2667 PF02527 rRNA small subunit methyltransferase G CPR_2668 PF01134 Glucose inhibited division protein A CPR_2668 PF13932 GidA associated domain CPR_2669 PF01926 50S ribosome-binding GTPase CPR_2669 PF10396 GTP-binding protein TrmE N-terminus CPR_2669 PF12631 MnmE helical domain CPR_2670 PF14804 Jag N-terminus CPR_2670 PF01424 R3H domain CPR_2671 PF02096 60Kd inner membrane protein CPR_2672 PF01809 Putative membrane protein insertion efficiency factor CPR_2673 PF00825 Ribonuclease P CPR_2674 PF00468 Ribosomal protein L34 CPR_A0002 PF02796 Helix-turn-helix domain of resolvase CPR_A0002 PF00239 Resolvase, N terminal domain CPR_A0003 PF01520 N-acetylmuramoyl-L-alanine amidase CPR_A0004 PF04545 Sigma-70, region 4 CPR_A0004 PF12645 Helix-turn-helix domain CPR_A0005 PF10960 BhlA holin family CPR_A0006 PF00246 Zinc carboxypeptidase CPR_A0006 PF08239 Bacterial SH3 domain CPR_A0010 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CPR_B0001 PF08239 Bacterial SH3 domain CPR_B0001 PF00246 Zinc carboxypeptidase CPR_B0002 PF10960 BhlA holin family CPR_B0003 PF04545 Sigma-70, region 4 CPR_B0003 PF12645 Helix-turn-helix domain CPR_B0004 PF01520 N-acetylmuramoyl-L-alanine amidase CPR_B0006 PF02796 Helix-turn-helix domain of resolvase CPR_B0006 PF00239 Resolvase, N terminal domain CPR_C0013 PF00574 Clp protease CPR_C0015 PF03354 Phage Terminase CPR_C0050 PF08239 Bacterial SH3 domain CPR_C0050 PF01183 Glycosyl hydrolases family 25