CPR_0001 SM00382 ATPases associated with a variety of cellular activities CPR_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain CPR_0002 SM00480 DNA polymerase III beta subunit CPR_0006 SM00387 Histidine kinase-like ATPases CPR_0006 SM00433 TopoisomeraseII CPR_0007 SM00434 DNA Topoisomerase IV CPR_0036 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_0036 SM01091 Transporter associated domain CPR_0041 SM00770 Zinc dependent phospholipase C (alpha toxin) CPR_0042 SM00833 Cobalamin synthesis protein cobW C-terminal domain CPR_0053 SM00382 ATPases associated with a variety of cellular activities CPR_0055 SM00382 ATPases associated with a variety of cellular activities CPR_0057 SM00493 CPR_0057 CPR_0081 SM00642 Alpha-amylase domain CPR_0084 SM00642 Alpha-amylase domain CPR_0089 SM00155 Phospholipase D. Active site motifs. CPR_0091 SM01061 CAT RNA binding domain CPR_0096 SM00838 Elongation factor G C-terminus CPR_0096 SM00889 Elongation factor G, domain IV CPR_0100 SM00855 Phosphoglycerate mutase family CPR_0108 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_0108 SM00876 Biotin and Thiamin Synthesis associated domain CPR_0113 SM00646 CPR_0113 CPR_0114 SM01324 CPR_0114 CPR_0117 SM00448 cheY-homologous receiver domain CPR_0117 SM00862 Transcriptional regulatory protein, C terminal CPR_0118 SM00387 Histidine kinase-like ATPases CPR_0119 SM00382 ATPases associated with a variety of cellular activities CPR_0128 SM00852 Probable molybdopterin binding domain CPR_0136 SM00382 ATPases associated with a variety of cellular activities CPR_0139 SM01040 BRO family, N-terminal domain CPR_0140 SM00919 Malic enzyme, NAD binding domain CPR_0140 SM01274 CPR_0140 CPR_0162 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CPR_0172 SM00382 ATPases associated with a variety of cellular activities CPR_0175 SM01130 CPR_0175 CPR_0185 SM00382 ATPases associated with a variety of cellular activities CPR_0195 SM00091 PAS domain CPR_0195 SM00387 Histidine kinase-like ATPases CPR_0195 SM00388 His Kinase A (phosphoacceptor) domain CPR_0207 SM00271 DnaJ molecular chaperone homology domain CPR_0208 SM00342 helix_turn_helix, arabinose operon control protein CPR_0209 SM00725 NEAr Transporter domain CPR_0210 SM00725 NEAr Transporter domain CPR_0214 SM00382 ATPases associated with a variety of cellular activities CPR_0215 SM00382 ATPases associated with a variety of cellular activities CPR_0216 SM00382 ATPases associated with a variety of cellular activities CPR_0225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_0225 SM00387 Histidine kinase-like ATPases CPR_0225 SM00388 His Kinase A (phosphoacceptor) domain CPR_0226 SM00448 cheY-homologous receiver domain CPR_0226 SM00862 Transcriptional regulatory protein, C terminal CPR_0235 SM00052 Putative diguanylate phosphodiesterase CPR_0235 SM00267 diguanylate cyclase CPR_0236 SM00271 DnaJ molecular chaperone homology domain CPR_0246 SM01058 CarD-like/TRCF domain CPR_0249 SM00986 Uracil DNA glycosylase superfamily CPR_0249 SM00987 UreE urease accessory protein, C-terminal domain CPR_0255 SM00382 ATPases associated with a variety of cellular activities CPR_0258 SM00382 ATPases associated with a variety of cellular activities CPR_0268 SM00966 SpoVT / AbrB like domain CPR_0275 SM00849 Metallo-beta-lactamase superfamily CPR_0288 SM00861 Transketolase, pyrimidine binding domain CPR_0291 SM00382 ATPases associated with a variety of cellular activities CPR_0293 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPR_0293 SM00245 tail specific protease CPR_0294 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPR_0295 SM00487 DEAD-like helicases superfamily CPR_0295 SM00490 helicase superfamily c-terminal domain CPR_0297 SM00382 ATPases associated with a variety of cellular activities CPR_0300 SM00534 ATPase domain of DNA mismatch repair MUTS family CPR_0301 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_0301 SM00895 CPR_0301 CPR_0303 SM00893 Electron transfer flavoprotein domain CPR_0304 SM00893 Electron transfer flavoprotein domain CPR_0311 SM00831 Cation transporter/ATPase, N-terminus CPR_0319 SM00382 ATPases associated with a variety of cellular activities CPR_0328 SM00341 Helicase and RNase D C-terminal CPR_0328 SM00487 DEAD-like helicases superfamily CPR_0328 SM00490 helicase superfamily c-terminal domain CPR_0328 SM00956 CPR_0328 CPR_0329 SM00382 ATPases associated with a variety of cellular activities CPR_0330 SM00240 Forkhead associated domain CPR_0333 SM00465 GIY-YIG type nucleases (URI domain) CPR_0339 SM00481 DNA polymerase alpha chain like domain CPR_0345 SM00155 Phospholipase D. Active site motifs. CPR_0347 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_0363 SM00382 ATPases associated with a variety of cellular activities CPR_0364 SM00382 ATPases associated with a variety of cellular activities CPR_0369 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_0382 SM01321 CPR_0382 CPR_0401 SM01323 CPR_0401 CPR_0403 SM00354 helix_turn _helix lactose operon repressor CPR_0406 SM01321 CPR_0406 CPR_0410 SM00947 Carbonic anhydrase CPR_0416 SM00354 helix_turn _helix lactose operon repressor CPR_0417 SM00642 Alpha-amylase domain CPR_0421 SM00479 CPR_0421 CPR_0423 SM01149 CPR_0423 CPR_0433 SM01091 Transporter associated domain CPR_0436 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_0437 SM00382 ATPases associated with a variety of cellular activities CPR_0441 SM00342 helix_turn_helix, arabinose operon control protein CPR_0443 SM01078 CPR_0443 CPR_0445 SM00422 helix_turn_helix, mercury resistance CPR_0448 SM00448 cheY-homologous receiver domain CPR_0448 SM00862 Transcriptional regulatory protein, C terminal CPR_0449 SM00387 Histidine kinase-like ATPases CPR_0449 SM00388 His Kinase A (phosphoacceptor) domain CPR_0456 SM00984 UDP binding domain CPR_0471 SM01321 CPR_0471 CPR_0474 SM00342 helix_turn_helix, arabinose operon control protein CPR_0484 SM00327 von Willebrand factor (vWF) type A domain CPR_0486 SM00448 cheY-homologous receiver domain CPR_0486 SM00850 LytTr DNA-binding domain CPR_0493 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_0494 SM00382 ATPases associated with a variety of cellular activities CPR_0495 SM00382 ATPases associated with a variety of cellular activities CPR_0500 SM00387 Histidine kinase-like ATPases CPR_0501 SM00448 cheY-homologous receiver domain CPR_0509 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_0521 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_0521 SM00382 ATPases associated with a variety of cellular activities CPR_0527 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_0527 SM00866 CPR_0527 CPR_0528 SM00740 CPR_0528 CPR_0529 SM00644 CPR_0529 CPR_0529 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. CPR_0538 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_0539 SM00342 helix_turn_helix, arabinose operon control protein CPR_0539 SM00448 cheY-homologous receiver domain CPR_0546 SM01321 CPR_0546 CPR_0552 SM00420 helix_turn_helix, Deoxyribose operon repressor CPR_0552 SM01134 CPR_0552 CPR_0565 SM00382 ATPases associated with a variety of cellular activities CPR_0567 SM00062 Bacterial periplasmic substrate-binding proteins CPR_0567 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPR_0569 SM00382 ATPases associated with a variety of cellular activities CPR_0592 SM00047 Lysozyme subfamily 2 CPR_0594 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_0607 SM00382 ATPases associated with a variety of cellular activities CPR_0609 SM00448 cheY-homologous receiver domain CPR_0609 SM00862 Transcriptional regulatory protein, C terminal CPR_0621 SM00954 Region found in RelA / SpoT proteins CPR_0623 SM00382 ATPases associated with a variety of cellular activities CPR_0625 SM01321 CPR_0625 CPR_0631 SM00287 Bacterial SH3 domain homologues CPR_0639 SM00028 Tetratricopeptide repeats CPR_0640 SM00812 Alpha-L-fucosidase CPR_0658 SM00382 ATPases associated with a variety of cellular activities CPR_0664 SM00341 Helicase and RNase D C-terminal CPR_0669 SM01211 CPR_0669 CPR_0670 SM01001 AIR carboxylase CPR_0675 SM00798 AICARFT/IMPCHase bienzyme CPR_0675 SM00851 MGS-like domain CPR_0676 SM01209 CPR_0676 CPR_0676 SM01210 CPR_0676 CPR_0678 SM01321 CPR_0678 CPR_0687 SM00060 Fibronectin type 3 domain CPR_0692 SM00830 Chorismate mutase type II CPR_0698 SM00382 ATPases associated with a variety of cellular activities CPR_0700 SM00344 helix_turn_helix ASNC type CPR_0702 SM00770 Zinc dependent phospholipase C (alpha toxin) CPR_0705 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPR_0708 SM00420 helix_turn_helix, Deoxyribose operon repressor CPR_0708 SM01134 CPR_0708 CPR_0715 SM00450 Rhodanese Homology Domain CPR_0722 SM01321 CPR_0722 CPR_0728 SM00382 ATPases associated with a variety of cellular activities CPR_0735 SM00155 Phospholipase D. Active site motifs. CPR_0749 SM00342 helix_turn_helix, arabinose operon control protein CPR_0750 SM01038 Beta galactosidase small chain CPR_0754 SM00100 Cyclic nucleotide-monophosphate binding domain CPR_0754 SM00419 helix_turn_helix, cAMP Regulatory protein CPR_0757 SM00100 Cyclic nucleotide-monophosphate binding domain CPR_0757 SM00419 helix_turn_helix, cAMP Regulatory protein CPR_0764 SM00382 ATPases associated with a variety of cellular activities CPR_0770 SM00849 Metallo-beta-lactamase superfamily CPR_0773 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_0781 SM00382 ATPases associated with a variety of cellular activities CPR_0783 SM00014 Acid phosphatase homologues CPR_0788 SM00267 diguanylate cyclase CPR_0789 SM00642 Alpha-amylase domain CPR_0797 SM00382 ATPases associated with a variety of cellular activities CPR_0817 SM00382 ATPases associated with a variety of cellular activities CPR_0818 SM00382 ATPases associated with a variety of cellular activities CPR_0825 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPR_0827 SM00226 Low molecular weight phosphatase family CPR_0831 SM00387 Histidine kinase-like ATPases CPR_0832 SM00974 CPR_0832 CPR_0841 SM00872 Alpha mannosidase, middle domain CPR_0847 SM00487 DEAD-like helicases superfamily CPR_0847 SM00490 helicase superfamily c-terminal domain CPR_0850 SM00060 Fibronectin type 3 domain CPR_0852 SM01005 Alanine racemase, C-terminal domain CPR_0862 SM00257 Lysin motif CPR_0868 SM00052 Putative diguanylate phosphodiesterase CPR_0868 SM00062 Bacterial periplasmic substrate-binding proteins CPR_0870 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPR_0883 SM00903 Flavin reductase like domain CPR_0886 SM00534 ATPase domain of DNA mismatch repair MUTS family CPR_0899 SM00530 Helix-turn-helix XRE-family like proteins CPR_0903 SM00354 helix_turn _helix lactose operon repressor CPR_0907 SM00382 ATPases associated with a variety of cellular activities CPR_0908 SM00640 Glycosyl hydrolases family 32 CPR_0922 SM00487 DEAD-like helicases superfamily CPR_0928 SM00342 helix_turn_helix, arabinose operon control protein CPR_0931 SM00052 Putative diguanylate phosphodiesterase CPR_0931 SM00062 Bacterial periplasmic substrate-binding proteins CPR_0938 SM00902 Iron hydrogenase small subunit CPR_0941 SM00857 Resolvase, N terminal domain CPR_0948 SM00642 Alpha-amylase domain CPR_0962 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_0971 SM00899 CPR_0971 CPR_0972 SM00899 CPR_0972 CPR_0986 SM00487 DEAD-like helicases superfamily CPR_0986 SM00490 helicase superfamily c-terminal domain CPR_0987 SM00363 S4 RNA-binding domain CPR_0996 SM00091 PAS domain CPR_0996 SM00267 diguanylate cyclase CPR_0996 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_0999 SM00849 Metallo-beta-lactamase superfamily CPR_1003 SM00342 helix_turn_helix, arabinose operon control protein CPR_1003 SM00448 cheY-homologous receiver domain CPR_1020 SM00448 cheY-homologous receiver domain CPR_1020 SM00862 Transcriptional regulatory protein, C terminal CPR_1021 SM00382 ATPases associated with a variety of cellular activities CPR_1023 SM00387 Histidine kinase-like ATPases CPR_1023 SM00388 His Kinase A (phosphoacceptor) domain CPR_1032 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_1035 SM00267 diguanylate cyclase CPR_1042 SM00838 Elongation factor G C-terminus CPR_1042 SM00889 Elongation factor G, domain IV CPR_1048 SM00342 helix_turn_helix, arabinose operon control protein CPR_1050 SM01321 CPR_1050 CPR_1055 SM00387 Histidine kinase-like ATPases CPR_1055 SM00388 His Kinase A (phosphoacceptor) domain CPR_1062 SM00100 Cyclic nucleotide-monophosphate binding domain CPR_1062 SM00419 helix_turn_helix, cAMP Regulatory protein CPR_1077 SM00851 MGS-like domain CPR_1082 SM00382 ATPases associated with a variety of cellular activities CPR_1091 SM00849 Metallo-beta-lactamase superfamily CPR_1092 SM00481 DNA polymerase alpha chain like domain CPR_1097 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_1099 SM00905 Dihydroneopterin aldolase CPR_1102 SM00014 Acid phosphatase homologues CPR_1105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPR_1112 SM00855 Phosphoglycerate mutase family CPR_1117 SM00382 ATPases associated with a variety of cellular activities CPR_1124 SM00450 Rhodanese Homology Domain CPR_1129 SM00028 Tetratricopeptide repeats CPR_1132 SM00244 prohibitin homologues CPR_1133 SM01005 Alanine racemase, C-terminal domain CPR_1135 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_1137 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CPR_1138 SM00822 CPR_1138 CPR_1139 SM00825 Beta-ketoacyl synthase CPR_1142 SM00878 Biotin carboxylase C-terminal domain CPR_1146 SM00518 AP endonuclease family 2 CPR_1147 SM00363 S4 RNA-binding domain CPR_1156 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1162 SM00764 Citrate lyase ligase C-terminal domain CPR_1167 SM00919 Malic enzyme, NAD binding domain CPR_1167 SM01274 CPR_1167 CPR_1171 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CPR_1171 SM00534 ATPase domain of DNA mismatch repair MUTS family CPR_1172 SM00853 MutL C terminal dimerisation domain CPR_1172 SM01340 CPR_1172 CPR_1199 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CPR_1216 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1217 SM00488 CPR_1217 CPR_1217 SM00491 CPR_1217 CPR_1224 SM00363 S4 RNA-binding domain CPR_1245 SM00047 Lysozyme subfamily 2 CPR_1245 SM00287 Bacterial SH3 domain homologues CPR_1248 SM00060 Fibronectin type 3 domain CPR_1255 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_1255 SM00924 MgtE intracellular N domain CPR_1266 SM00287 Bacterial SH3 domain homologues CPR_1278 SM00776 CPR_1278 CPR_1278 SM01276 CPR_1278 CPR_1280 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_1283 SM00347 helix_turn_helix multiple antibiotic resistance protein CPR_1288 SM00028 Tetratricopeptide repeats CPR_1292 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_1292 SM00357 Cold shock protein domain CPR_1292 SM00955 CPR_1292 CPR_1295 SM01192 CPR_1295 CPR_1295 SM01193 CPR_1295 CPR_1301 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPR_1310 SM01208 CPR_1310 CPR_1316 SM00091 PAS domain CPR_1316 SM00387 Histidine kinase-like ATPases CPR_1316 SM00388 His Kinase A (phosphoacceptor) domain CPR_1318 SM00478 endonuclease III CPR_1319 SM00563 Phosphate acyltransferases CPR_1323 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_1323 SM00924 MgtE intracellular N domain CPR_1324 SM00062 Bacterial periplasmic substrate-binding proteins CPR_1324 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPR_1326 SM00382 ATPases associated with a variety of cellular activities CPR_1328 SM00046 Diacylglycerol kinase catalytic domain (presumed) CPR_1334 SM00763 PrkA AAA domain CPR_1335 SM00341 Helicase and RNase D C-terminal CPR_1335 SM00487 DEAD-like helicases superfamily CPR_1335 SM00490 helicase superfamily c-terminal domain CPR_1335 SM00956 CPR_1335 CPR_1340 SM00354 helix_turn _helix lactose operon repressor CPR_1342 SM00382 ATPases associated with a variety of cellular activities CPR_1352 SM01118 CPR_1352 CPR_1353 SM00287 Bacterial SH3 domain homologues CPR_1361 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_1382 SM00382 ATPases associated with a variety of cellular activities CPR_1382 SM00464 Found in ATP-dependent protease La (LON) CPR_1383 SM00382 ATPases associated with a variety of cellular activities CPR_1384 SM00382 ATPases associated with a variety of cellular activities CPR_1384 SM00994 ClpX C4-type zinc finger CPR_1384 SM01086 C-terminal, D2-small domain, of ClpB protein CPR_1389 SM00487 DEAD-like helicases superfamily CPR_1389 SM00490 helicase superfamily c-terminal domain CPR_1394 SM00479 CPR_1394 CPR_1395 SM01264 CPR_1395 CPR_1398 SM00646 CPR_1398 CPR_1399 SM00903 Flavin reductase like domain CPR_1402 SM00981 CPR_1402 CPR_1405 SM00872 Alpha mannosidase, middle domain CPR_1407 SM00563 Phosphate acyltransferases CPR_1416 SM00382 ATPases associated with a variety of cellular activities CPR_1416 SM01086 C-terminal, D2-small domain, of ClpB protein CPR_1417 SM00954 Region found in RelA / SpoT proteins CPR_1418 SM00155 Phospholipase D. Active site motifs. CPR_1420 SM01004 Delta-aminolevulinic acid dehydratase CPR_1428 SM00100 Cyclic nucleotide-monophosphate binding domain CPR_1428 SM00419 helix_turn_helix, cAMP Regulatory protein CPR_1431 SM00465 GIY-YIG type nucleases (URI domain) CPR_1432 SM00342 helix_turn_helix, arabinose operon control protein CPR_1433 SM00530 Helix-turn-helix XRE-family like proteins CPR_1434 SM00028 Tetratricopeptide repeats CPR_1434 SM00530 Helix-turn-helix XRE-family like proteins CPR_1442 SM00382 ATPases associated with a variety of cellular activities CPR_1449 SM00382 ATPases associated with a variety of cellular activities CPR_1464 SM00382 ATPases associated with a variety of cellular activities CPR_1480 SM00849 Metallo-beta-lactamase superfamily CPR_1482 SM00448 cheY-homologous receiver domain CPR_1482 SM00850 LytTr DNA-binding domain CPR_1483 SM00646 CPR_1483 CPR_1485 SM01208 CPR_1485 CPR_1487 SM00382 ATPases associated with a variety of cellular activities CPR_1489 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPR_1489 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPR_1489 SM00493 CPR_1489 CPR_1493 SM00387 Histidine kinase-like ATPases CPR_1493 SM00388 His Kinase A (phosphoacceptor) domain CPR_1497 SM00487 DEAD-like helicases superfamily CPR_1497 SM00490 helicase superfamily c-terminal domain CPR_1499 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPR_1511 SM00640 Glycosyl hydrolases family 32 CPR_1512 SM00354 helix_turn _helix lactose operon repressor CPR_1517 SM00382 ATPases associated with a variety of cellular activities CPR_1518 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPR_1519 SM01400 CPR_1519 CPR_1522 SM00642 Alpha-amylase domain CPR_1530 SM00267 diguanylate cyclase CPR_1530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_1532 SM00793 Accessory gene regulator B CPR_1548 SM00881 CoA binding domain CPR_1551 SM00382 ATPases associated with a variety of cellular activities CPR_1555 SM00382 ATPases associated with a variety of cellular activities CPR_1557 SM00450 Rhodanese Homology Domain CPR_1558 SM00642 Alpha-amylase domain CPR_1559 SM00642 Alpha-amylase domain CPR_1566 SM01321 CPR_1566 CPR_1570 SM00876 Biotin and Thiamin Synthesis associated domain CPR_1575 SM00954 Region found in RelA / SpoT proteins CPR_1584 SM01321 CPR_1584 CPR_1597 SM00487 DEAD-like helicases superfamily CPR_1597 SM00490 helicase superfamily c-terminal domain CPR_1598 SM00354 helix_turn _helix lactose operon repressor CPR_1601 SM00382 ATPases associated with a variety of cellular activities CPR_1606 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPR_1616 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1621 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_1623 SM00481 DNA polymerase alpha chain like domain CPR_1625 SM00344 helix_turn_helix ASNC type CPR_1630 SM00899 CPR_1630 CPR_1633 SM00836 DALR anticodon binding domain CPR_1633 SM01016 Arginyl tRNA synthetase N terminal dom CPR_1635 SM00854 Bacterial capsule synthesis protein PGA_cap CPR_1637 SM00670 Large family of predicted nucleotide-binding domains CPR_1638 SM00479 CPR_1638 CPR_1640 SM00998 Adenylosuccinate lyase C-terminus CPR_1644 SM00322 K homology RNA-binding domain CPR_1644 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_1645 SM00382 ATPases associated with a variety of cellular activities CPR_1647 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1648 SM00382 ATPases associated with a variety of cellular activities CPR_1648 SM00843 CPR_1648 CPR_1652 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_1652 SM00322 K homology RNA-binding domain CPR_1653 SM01387 CPR_1653 CPR_1654 SM00904 Riboflavin kinase CPR_1661 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_1661 SM00322 K homology RNA-binding domain CPR_1663 SM00479 CPR_1663 CPR_1663 SM00481 DNA polymerase alpha chain like domain CPR_1665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPR_1674 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPR_1674 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPR_1674 SM00493 CPR_1674 CPR_1676 SM00382 ATPases associated with a variety of cellular activities CPR_1685 SM00382 ATPases associated with a variety of cellular activities CPR_1685 SM00962 SRP54-type protein, GTPase domain CPR_1685 SM00963 SRP54-type protein, helical bundle domain CPR_1687 SM00382 ATPases associated with a variety of cellular activities CPR_1687 SM00962 SRP54-type protein, GTPase domain CPR_1687 SM00963 SRP54-type protein, helical bundle domain CPR_1688 SM00968 SMC proteins Flexible Hinge Domain CPR_1689 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1690 SM00358 Double-stranded RNA binding motif CPR_1690 SM00535 Ribonuclease III family CPR_1702 SM00487 DEAD-like helicases superfamily CPR_1702 SM00490 helicase superfamily c-terminal domain CPR_1703 SM01120 CPR_1703 CPR_1703 SM01121 CPR_1703 CPR_1706 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CPR_1709 SM00220 Serine/Threonine protein kinases, catalytic domain CPR_1709 SM00740 CPR_1709 CPR_1710 SM00331 Sigma factor PP2C-like phosphatases CPR_1710 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CPR_1711 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1716 SM00487 DEAD-like helicases superfamily CPR_1716 SM00490 helicase superfamily c-terminal domain CPR_1718 SM01409 CPR_1718 CPR_1719 SM00072 Guanylate kinase homologues. CPR_1723 SM00870 CPR_1723 CPR_1726 SM00382 ATPases associated with a variety of cellular activities CPR_1728 SM00091 PAS domain CPR_1728 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_1728 SM00387 Histidine kinase-like ATPases CPR_1728 SM00388 His Kinase A (phosphoacceptor) domain CPR_1735 SM00864 Tubulin/FtsZ family, GTPase domain CPR_1735 SM00865 Tubulin/FtsZ family, C-terminal domain CPR_1736 SM00842 Cell division protein FtsA CPR_1737 SM00382 ATPases associated with a variety of cellular activities CPR_1744 SM00838 Elongation factor G C-terminus CPR_1745 SM00849 Metallo-beta-lactamase superfamily CPR_1748 SM00732 Likely ribonuclease with RNase H fold. CPR_1750 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPR_1757 SM00382 ATPases associated with a variety of cellular activities CPR_1758 SM00267 diguanylate cyclase CPR_1760 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1761 SM00852 Probable molybdopterin binding domain CPR_1763 SM00852 Probable molybdopterin binding domain CPR_1767 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPR_1775 SM00936 Penicillin-binding protein 5, C-terminal domain CPR_1776 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CPR_1781 SM00448 cheY-homologous receiver domain CPR_1782 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPR_1786 SM00363 S4 RNA-binding domain CPR_1787 SM00861 Transketolase, pyrimidine binding domain CPR_1801 SM00382 ATPases associated with a variety of cellular activities CPR_1803 SM00841 Elongation factor P, C-terminal CPR_1803 SM01185 CPR_1803 CPR_1812 SM00382 ATPases associated with a variety of cellular activities CPR_1816 SM00981 CPR_1816 CPR_1818 SM00363 S4 RNA-binding domain CPR_1820 SM00363 S4 RNA-binding domain CPR_1831 SM00740 CPR_1831 CPR_1840 SM00028 Tetratricopeptide repeats CPR_1842 SM00776 CPR_1842 CPR_1843 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CPR_1843 SM00812 Alpha-L-fucosidase CPR_1846 SM00740 CPR_1846 CPR_1847 SM00463 Small MutS-related domain CPR_1847 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CPR_1847 SM00534 ATPase domain of DNA mismatch repair MUTS family CPR_1851 SM00873 B3/4 domain CPR_1851 SM00874 tRNA synthetase B5 domain CPR_1851 SM00896 Ferredoxin-fold anticodon binding domain CPR_1853 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPR_1871 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPR_1872 SM01130 CPR_1872 CPR_1887 SM00028 Tetratricopeptide repeats CPR_1888 SM00460 Transglutaminase/protease-like homologues CPR_1891 SM00448 cheY-homologous receiver domain CPR_1891 SM00862 Transcriptional regulatory protein, C terminal CPR_1892 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_1892 SM00387 Histidine kinase-like ATPases CPR_1892 SM00388 His Kinase A (phosphoacceptor) domain CPR_1901 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1902 SM00849 Metallo-beta-lactamase superfamily CPR_1904 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_1904 SM00954 Region found in RelA / SpoT proteins CPR_1911 SM01323 CPR_1911 CPR_1914 SM00382 ATPases associated with a variety of cellular activities CPR_1915 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPR_1924 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_1934 SM00530 Helix-turn-helix XRE-family like proteins CPR_1935 SM00382 ATPases associated with a variety of cellular activities CPR_1939 SM00562 CPR_1939 CPR_1946 SM00028 Tetratricopeptide repeats CPR_1950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPR_1950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPR_1950 SM00493 CPR_1950 CPR_1953 SM00387 Histidine kinase-like ATPases CPR_1953 SM00388 His Kinase A (phosphoacceptor) domain CPR_1954 SM00387 Histidine kinase-like ATPases CPR_1954 SM00388 His Kinase A (phosphoacceptor) domain CPR_1955 SM00028 Tetratricopeptide repeats CPR_1955 SM00671 Sel1-like repeats. CPR_1962 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CPR_1962 SM00475 5'-3' exonuclease CPR_1962 SM00482 DNA polymerase A domain CPR_1969 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_1976 SM00400 zinc finger CPR_1976 SM00493 CPR_1976 CPR_1977 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_1979 SM00382 ATPases associated with a variety of cellular activities CPR_1989 SM00014 Acid phosphatase homologues CPR_1991 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_1997 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_2000 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_2003 SM00382 ATPases associated with a variety of cellular activities CPR_2004 SM00271 DnaJ molecular chaperone homology domain CPR_2008 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_2010 SM00838 Elongation factor G C-terminus CPR_2021 SM00387 Histidine kinase-like ATPases CPR_2024 SM01133 CPR_2024 CPR_2026 SM00831 Cation transporter/ATPase, N-terminus CPR_2027 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_2027 SM01131 CPR_2027 CPR_2032 SM00890 Domain of unknown function CPR_2039 SM00434 DNA Topoisomerase IV CPR_2040 SM00387 Histidine kinase-like ATPases CPR_2040 SM00433 TopoisomeraseII CPR_2041 SM00450 Rhodanese Homology Domain CPR_2049 SM00872 Alpha mannosidase, middle domain CPR_2055 SM00852 Probable molybdopterin binding domain CPR_2056 SM00342 helix_turn_helix, arabinose operon control protein CPR_2056 SM00448 cheY-homologous receiver domain CPR_2057 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_2061 SM00382 ATPases associated with a variety of cellular activities CPR_2062 SM00062 Bacterial periplasmic substrate-binding proteins CPR_2062 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPR_2066 SM00490 helicase superfamily c-terminal domain CPR_2075 SM00382 ATPases associated with a variety of cellular activities CPR_2076 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_2077 SM00448 cheY-homologous receiver domain CPR_2077 SM00862 Transcriptional regulatory protein, C terminal CPR_2079 SM00382 ATPases associated with a variety of cellular activities CPR_2087 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPR_2091 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPR_2093 SM01103 CPR_2093 CPR_2100 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_2114 SM00481 DNA polymerase alpha chain like domain CPR_2117 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_2120 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_2121 SM00479 CPR_2121 CPR_2123 SM00534 ATPase domain of DNA mismatch repair MUTS family CPR_2131 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_2136 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_2136 SM00732 Likely ribonuclease with RNase H fold. CPR_2139 SM00957 SecA DEAD-like domain CPR_2139 SM00958 SecA preprotein cross-linking domain CPR_2143 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPR_2143 SM00382 ATPases associated with a variety of cellular activities CPR_2162 SM00382 ATPases associated with a variety of cellular activities CPR_2176 SM00937 CPR_2176 CPR_2181 SM00357 Cold shock protein domain CPR_2181 SM00382 ATPases associated with a variety of cellular activities CPR_2181 SM00959 Rho termination factor, N-terminal domain CPR_2189 SM00257 Lysin motif CPR_2200 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPR_2209 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_2209 SM00387 Histidine kinase-like ATPases CPR_2209 SM00388 His Kinase A (phosphoacceptor) domain CPR_2210 SM00448 cheY-homologous receiver domain CPR_2210 SM00862 Transcriptional regulatory protein, C terminal CPR_2245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPR_2245 SM00292 breast cancer carboxy-terminal domain CPR_2245 SM00532 Ligase N family CPR_2249 SM00363 S4 RNA-binding domain CPR_2254 SM00382 ATPases associated with a variety of cellular activities CPR_2255 SM00382 ATPases associated with a variety of cellular activities CPR_2261 SM00116 Domain in cystathionine beta-synthase and other proteins. CPR_2261 SM01240 CPR_2261 CPR_2263 SM00327 von Willebrand factor (vWF) type A domain CPR_2269 SM00842 Cell division protein FtsA CPR_2272 SM00382 ATPases associated with a variety of cellular activities CPR_2276 SM00883 Chaperonin 10 Kd subunit CPR_2279 SM00478 endonuclease III CPR_2282 SM00382 ATPases associated with a variety of cellular activities CPR_2284 SM00893 Electron transfer flavoprotein domain CPR_2285 SM00893 Electron transfer flavoprotein domain CPR_2288 SM00881 CoA binding domain CPR_2290 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPR_2299 SM00363 S4 RNA-binding domain CPR_2317 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPR_2326 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_2326 SM00387 Histidine kinase-like ATPases CPR_2326 SM00388 His Kinase A (phosphoacceptor) domain CPR_2327 SM00448 cheY-homologous receiver domain CPR_2327 SM00862 Transcriptional regulatory protein, C terminal CPR_2335 SM00354 helix_turn _helix lactose operon repressor CPR_2340 SM00382 ATPases associated with a variety of cellular activities CPR_2341 SM00902 Iron hydrogenase small subunit CPR_2341 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPR_2353 SM00091 PAS domain CPR_2353 SM00382 ATPases associated with a variety of cellular activities CPR_2354 SM00363 S4 RNA-binding domain CPR_2354 SM01390 CPR_2354 CPR_2358 SM00387 Histidine kinase-like ATPases CPR_2358 SM00388 His Kinase A (phosphoacceptor) domain CPR_2359 SM00448 cheY-homologous receiver domain CPR_2359 SM00862 Transcriptional regulatory protein, C terminal CPR_2361 SM00646 CPR_2361 CPR_2370 SM00662 RNA polymerases D CPR_2371 SM00363 S4 RNA-binding domain CPR_2371 SM01390 CPR_2371 CPR_2375 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_2388 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPR_2389 SM01374 CPR_2389 CPR_2393 SM00322 K homology RNA-binding domain CPR_2396 SM01382 CPR_2396 CPR_2396 SM01383 CPR_2396 CPR_2400 SM01403 CPR_2400 CPR_2403 SM00838 Elongation factor G C-terminus CPR_2403 SM00889 Elongation factor G, domain IV CPR_2407 SM00663 RNA polymerase I subunit A N-terminus CPR_2412 SM00649 Ribosomal protein L11/L12 CPR_2413 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CPR_2420 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPR_2424 SM00840 CPR_2424 CPR_2427 SM00670 Large family of predicted nucleotide-binding domains CPR_2430 SM00382 ATPases associated with a variety of cellular activities CPR_2432 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_2432 SM00866 CPR_2432 CPR_2437 SM00382 ATPases associated with a variety of cellular activities CPR_2437 SM01086 C-terminal, D2-small domain, of ClpB protein CPR_2447 SM00072 Guanylate kinase homologues. CPR_2462 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_2462 SM00876 Biotin and Thiamin Synthesis associated domain CPR_2472 SM00382 ATPases associated with a variety of cellular activities CPR_2474 SM00977 TilS substrate C-terminal domain CPR_2475 SM00331 Sigma factor PP2C-like phosphatases CPR_2483 SM00316 Ribosomal protein S1-like RNA-binding domain CPR_2487 SM00363 S4 RNA-binding domain CPR_2488 SM00411 bacterial (prokaryotic) histone like domain CPR_2491 SM00966 SpoVT / AbrB like domain CPR_2493 SM00487 DEAD-like helicases superfamily CPR_2493 SM00490 helicase superfamily c-terminal domain CPR_2493 SM00982 CPR_2493 CPR_2493 SM01058 CarD-like/TRCF domain CPR_2495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPR_2496 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPR_2496 SM00387 Histidine kinase-like ATPases CPR_2496 SM00388 His Kinase A (phosphoacceptor) domain CPR_2497 SM00448 cheY-homologous receiver domain CPR_2497 SM00862 Transcriptional regulatory protein, C terminal CPR_2498 SM01400 CPR_2498 CPR_2503 SM00354 helix_turn _helix lactose operon repressor CPR_2508 SM01117 CPR_2508 CPR_2526 SM00650 Ribosomal RNA adenine dimethylases CPR_2527 SM00493 CPR_2527 CPR_2528 SM01208 CPR_2528 CPR_2531 SM00100 Cyclic nucleotide-monophosphate binding domain CPR_2539 SM01011 Aminopeptidase P, N-terminal domain CPR_2548 SM00354 helix_turn _helix lactose operon repressor CPR_2549 SM00450 Rhodanese Homology Domain CPR_2553 SM00382 ATPases associated with a variety of cellular activities CPR_2555 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CPR_2563 SM00729 Elongator protein 3, MiaB family, Radical SAM CPR_2568 SM00530 Helix-turn-helix XRE-family like proteins CPR_2573 SM01230 CPR_2573 CPR_2576 SM00851 MGS-like domain CPR_2576 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPR_2577 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CPR_2590 SM01266 CPR_2590 CPR_2606 SM00354 helix_turn _helix lactose operon repressor CPR_2614 SM00909 Sporulation and spore germination CPR_2615 SM00849 Metallo-beta-lactamase superfamily CPR_2621 SM01208 CPR_2621 CPR_2623 SM00382 ATPases associated with a variety of cellular activities CPR_2641 SM00788 Adenylosuccinate synthetase CPR_2646 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPR_2646 SM00866 CPR_2646 CPR_2648 SM00382 ATPases associated with a variety of cellular activities CPR_2649 SM00382 ATPases associated with a variety of cellular activities CPR_2665 SM00470 ParB-like nuclease domain CPR_2668 SM01228 CPR_2668 CPR_2670 SM00393 Putative single-stranded nucleic acids-binding domain CPR_2670 SM01245 CPR_2670 CPR_2672 SM01234 CPR_2672 CPR_A0002 SM00857 Resolvase, N terminal domain CPR_A0003 SM00646 CPR_A0003 CPR_A0006 SM00287 Bacterial SH3 domain homologues CPR_B0001 SM00287 Bacterial SH3 domain homologues CPR_B0004 SM00646 CPR_B0004 CPR_B0006 SM00857 Resolvase, N terminal domain CPR_C0017 SM00507 HNH nucleases CPR_C0038 SM00530 Helix-turn-helix XRE-family like proteins CPR_C0050 SM00287 Bacterial SH3 domain homologues CPR_C0050 SM00641 Glycosyl hydrolases family 25