CLSA_c00010 PF00308 Bacterial dnaA protein CLSA_c00010 PF08299 Bacterial dnaA protein helix-turn-helix CLSA_c00010 PF11638 DnaA N-terminal domain CLSA_c00020 PF00712 DNA polymerase III beta subunit, N-terminal domain CLSA_c00020 PF02767 DNA polymerase III beta subunit, central domain CLSA_c00020 PF02768 DNA polymerase III beta subunit, C-terminal domain CLSA_c00030 PF13275 S4 domain CLSA_c00040 PF02463 RecF/RecN/SMC N terminal domain CLSA_c00050 PF04025 CLSA_c00050 CLSA_c00060 PF00204 DNA gyrase B CLSA_c00060 PF00986 DNA gyrase B subunit, carboxyl terminus CLSA_c00060 PF01751 Toprim domain CLSA_c00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c00070 PF00521 DNA gyrase/topoisomerase IV, subunit A CLSA_c00070 PF03989 DNA gyrase C-terminal domain, beta-propeller CLSA_c00130 PF01966 HD domain CLSA_c00140 PF02829 3H domain CLSA_c00140 PF08279 HTH domain CLSA_c00150 PF01266 FAD dependent oxidoreductase CLSA_c00150 PF04324 BFD-like [2Fe-2S] binding domain CLSA_c00160 PF07892 Protein of unknown function (DUF1667) CLSA_c00170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLSA_c00170 PF02403 Seryl-tRNA synthetase N-terminal domain CLSA_c00220 PF13302 Acetyltransferase (GNAT) domain CLSA_c00230 PF04257 Exodeoxyribonuclease V, gamma subunit CLSA_c00230 PF12705 PD-(D/E)XK nuclease superfamily CLSA_c00240 PF00580 UvrD/REP helicase N-terminal domain CLSA_c00240 PF12705 PD-(D/E)XK nuclease superfamily CLSA_c00240 PF13361 UvrD-like helicase C-terminal domain CLSA_c00250 PF03734 L,D-transpeptidase catalytic domain CLSA_c00260 PF06691 CLSA_c00260 CLSA_c00270 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c00290 PF00376 MerR family regulatory protein CLSA_c00300 PF01473 Putative cell wall binding repeat CLSA_c00310 PF09002 Domain of unknown function (DUF1887) CLSA_c00320 PF02666 CLSA_c00320 CLSA_c00330 PF00440 Bacterial regulatory proteins, tetR family CLSA_c00340 PF02256 Iron hydrogenase small subunit CLSA_c00340 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLSA_c00340 PF12837 4Fe-4S binding domain CLSA_c00340 PF13510 2Fe-2S iron-sulfur cluster binding domain CLSA_c00350 PF00005 ABC transporter CLSA_c00350 PF12848 ABC transporter CLSA_c00360 PF09818 Predicted ATPase of the ABC class CLSA_c00370 PF08876 CLSA_c00370 CLSA_c00380 PF03006 CLSA_c00380 CLSA_c00390 PF00696 Amino acid kinase family CLSA_c00400 PF00171 Aldehyde dehydrogenase family CLSA_c00410 PF02142 MGS-like domain CLSA_c00420 PF00106 short chain dehydrogenase CLSA_c00430 PF00117 Glutamine amidotransferase class-I CLSA_c00430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLSA_c00440 PF02142 MGS-like domain CLSA_c00440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLSA_c00440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLSA_c00470 PF01966 HD domain CLSA_c00480 PF01177 Asp/Glu/Hydantoin racemase CLSA_c00490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLSA_c00500 PF12646 CLSA_c00500 CLSA_c00510 PF12844 Helix-turn-helix domain CLSA_c00520 PF00082 Subtilase family CLSA_c00520 PF01471 Putative peptidoglycan binding domain CLSA_c00530 PF04055 Radical SAM superfamily CLSA_c00550 PF04055 Radical SAM superfamily CLSA_c00550 PF16199 CLSA_c00550 CLSA_c00560 PF04029 2-phosphosulpholactate phosphatase CLSA_c00570 PF04324 BFD-like [2Fe-2S] binding domain CLSA_c00580 PF00072 Response regulator receiver domain CLSA_c00580 PF00486 Transcriptional regulatory protein, C terminal CLSA_c00590 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c00590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c00600 PF09858 CLSA_c00600 CLSA_c00610 PF13240 CLSA_c00610 CLSA_c00620 PF00133 tRNA synthetases class I (I, L, M and V) CLSA_c00620 PF08264 Anticodon-binding domain of tRNA CLSA_c00630 PF00356 Bacterial regulatory proteins, lacI family CLSA_c00630 PF13377 Periplasmic binding protein-like domain CLSA_c00640 PF01047 MarR family CLSA_c00650 PF01554 MatE CLSA_c00670 PF07670 Nucleoside recognition CLSA_c00690 PF00557 Metallopeptidase family M24 CLSA_c00690 PF05195 Aminopeptidase P, N-terminal domain CLSA_c00700 PF05597 CLSA_c00700 CLSA_c00710 PF03109 CLSA_c00710 CLSA_c00720 PF01588 Putative tRNA binding domain CLSA_c00720 PF09334 tRNA synthetases class I (M) CLSA_c00730 PF08264 Anticodon-binding domain of tRNA CLSA_c00730 PF09334 tRNA synthetases class I (M) CLSA_c00740 PF01026 TatD related DNase CLSA_c00750 PF03990 CLSA_c00750 CLSA_c00750 PF06725 3D domain CLSA_c00750 PF07501 G5 domain CLSA_c00760 PF01751 Toprim domain CLSA_c00760 PF13331 CLSA_c00760 CLSA_c00770 PF00398 Ribosomal RNA adenine dimethylase CLSA_c00800 PF01790 CLSA_c00800 CLSA_c00820 PF10609 ParA/MinD ATPase like CLSA_c00830 PF13370 4Fe-4S single cluster domain CLSA_c00840 PF09515 Thiamine transporter protein (Thia_YuaJ) CLSA_c00850 PF02645 Uncharacterised protein, DegV family COG1307 CLSA_c00860 PF03477 ATP cone domain CLSA_c00860 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLSA_c00870 PF00682 HMGL-like CLSA_c00880 PF00330 Aconitase family (aconitate hydratase) CLSA_c00880 PF00694 Aconitase C-terminal domain CLSA_c00890 PF13353 4Fe-4S single cluster domain CLSA_c00900 PF01263 Aldose 1-epimerase CLSA_c00910 PF02245 Methylpurine-DNA glycosylase (MPG) CLSA_c00920 PF01370 NAD dependent epimerase/dehydratase family CLSA_c00930 PF04138 CLSA_c00930 CLSA_c00940 PF00535 Glycosyl transferase family 2 CLSA_c00950 PF00535 Glycosyl transferase family 2 CLSA_c00960 PF13231 CLSA_c00960 CLSA_c00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c00970 PF03466 LysR substrate binding domain CLSA_c00980 PF03313 CLSA_c00980 CLSA_c00990 PF00872 CLSA_c00990 CLSA_c01000 PF00152 tRNA synthetases class II (D, K and N) CLSA_c01000 PF01336 OB-fold nucleic acid binding domain CLSA_c01010 PF12850 Calcineurin-like phosphoesterase superfamily domain CLSA_c01020 PF00557 Metallopeptidase family M24 CLSA_c01020 PF01321 Creatinase/Prolidase N-terminal domain CLSA_c01030 PF01225 Mur ligase family, catalytic domain CLSA_c01030 PF02875 Mur ligase family, glutamate ligase domain CLSA_c01030 PF08245 Mur ligase middle domain CLSA_c01040 PF00156 Phosphoribosyl transferase domain CLSA_c01040 PF09182 Bacterial purine repressor, N-terminal CLSA_c01050 PF04026 SpoVG CLSA_c01060 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c01060 PF00483 Nucleotidyl transferase CLSA_c01070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLSA_c01070 PF14572 Phosphoribosyl synthetase-associated domain CLSA_c01080 PF00072 Response regulator receiver domain CLSA_c01080 PF00486 Transcriptional regulatory protein, C terminal CLSA_c01090 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c01090 PF00672 HAMP domain CLSA_c01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c01100 PF01195 Peptidyl-tRNA hydrolase CLSA_c01110 PF00270 DEAD/DEAH box helicase CLSA_c01110 PF00271 Helicase conserved C-terminal domain CLSA_c01110 PF02559 CarD-like/TRCF domain CLSA_c01110 PF03461 TRCF domain CLSA_c01120 PF13616 PPIC-type PPIASE domain CLSA_c01120 PF13624 SurA N-terminal domain CLSA_c01140 PF00005 ABC transporter CLSA_c01140 PF00664 ABC transporter transmembrane region CLSA_c01140 PF03412 Peptidase C39 family CLSA_c01160 PF04014 Antidote-toxin recognition MazE CLSA_c01160 PF15714 CLSA_c01160 CLSA_c01170 PF01943 CLSA_c01170 CLSA_c01170 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c01180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c01180 PF03819 MazG nucleotide pyrophosphohydrolase domain CLSA_c01190 PF00216 Bacterial DNA-binding protein CLSA_c01200 PF01479 S4 domain CLSA_c01210 PF07873 YabP family CLSA_c01220 PF09578 CLSA_c01220 CLSA_c01230 PF04977 Septum formation initiator CLSA_c01240 PF00575 S1 RNA binding domain CLSA_c01350 PF07228 Stage II sporulation protein E (SpoIIE) CLSA_c01360 PF01171 PP-loop family CLSA_c01360 PF11734 TilS substrate C-terminal domain CLSA_c01370 PF00156 Phosphoribosyl transferase domain CLSA_c01380 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c01380 PF01434 Peptidase family M41 CLSA_c01390 PF01268 Formate--tetrahydrofolate ligase CLSA_c01400 PF03309 Type III pantothenate kinase CLSA_c01410 PF01207 Dihydrouridine synthase (Dus) CLSA_c01420 PF01272 Transcription elongation factor, GreA/GreB, C-term CLSA_c01420 PF03449 Transcription elongation factor, N-terminal CLSA_c01430 PF00152 tRNA synthetases class II (D, K and N) CLSA_c01430 PF01336 OB-fold nucleic acid binding domain CLSA_c01470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLSA_c01470 PF03129 Anticodon binding domain CLSA_c01480 PF08245 Mur ligase middle domain CLSA_c01490 PF16472 CLSA_c01490 CLSA_c01570 PF00083 Sugar (and other) transporter CLSA_c01580 PF01544 CorA-like Mg2+ transporter protein CLSA_c01600 PF10764 CLSA_c01600 CLSA_c01610 PF02223 Thymidylate kinase CLSA_c01620 PF06153 Protein of unknown function (DUF970) CLSA_c01630 PF09115 DNA polymerase III, delta subunit, C terminal CLSA_c01630 PF13177 DNA polymerase III, delta subunit CLSA_c01640 PF04468 CLSA_c01640 CLSA_c01660 PF12838 4Fe-4S dicluster domain CLSA_c01670 PF13483 Beta-lactamase superfamily domain CLSA_c01680 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) CLSA_c01690 PF02151 UvrB/uvrC motif CLSA_c01700 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CLSA_c01710 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c01710 PF02151 UvrB/uvrC motif CLSA_c01710 PF02861 Clp amino terminal domain CLSA_c01710 PF07724 AAA domain (Cdc48 subfamily) CLSA_c01710 PF10431 C-terminal, D2-small domain, of ClpB protein CLSA_c01720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c01730 PF00462 Glutaredoxin CLSA_c01740 PF13481 AAA domain CLSA_c01750 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLSA_c01750 PF10635 DisA bacterial checkpoint controller linker region CLSA_c01770 PF13638 PIN domain CLSA_c01780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLSA_c01790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLSA_c01790 PF03129 Anticodon binding domain CLSA_c01790 PF04073 Aminoacyl-tRNA editing domain CLSA_c01800 PF01406 tRNA synthetases class I (C) catalytic domain CLSA_c01800 PF09190 DALR domain CLSA_c01810 PF00636 Ribonuclease III domain CLSA_c01820 PF00588 SpoU rRNA Methylase family CLSA_c01820 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLSA_c01830 PF05991 CLSA_c01830 CLSA_c01840 PF04542 Sigma-70 region 2 CLSA_c01840 PF08281 Sigma-70, region 4 CLSA_c01860 PF00009 Elongation factor Tu GTP binding domain CLSA_c01860 PF03143 Elongation factor Tu C-terminal domain CLSA_c01860 PF03144 Elongation factor Tu domain 2 CLSA_c01870 PF00471 Ribosomal protein L33 CLSA_c01880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CLSA_c01890 PF02357 Transcription termination factor nusG CLSA_c01900 PF00298 Ribosomal protein L11, RNA binding domain CLSA_c01900 PF03946 Ribosomal protein L11, N-terminal domain CLSA_c01910 PF00687 Ribosomal protein L1p/L10e family CLSA_c01920 PF00466 Ribosomal protein L10 CLSA_c01930 PF00542 Ribosomal protein L7/L12 C-terminal domain CLSA_c01930 PF16320 CLSA_c01930 CLSA_c01940 PF00562 RNA polymerase Rpb2, domain 6 CLSA_c01940 PF04560 RNA polymerase Rpb2, domain 7 CLSA_c01940 PF04561 RNA polymerase Rpb2, domain 2 CLSA_c01940 PF04563 RNA polymerase beta subunit CLSA_c01940 PF04565 RNA polymerase Rpb2, domain 3 CLSA_c01940 PF10385 RNA polymerase beta subunit external 1 domain CLSA_c01950 PF00623 RNA polymerase Rpb1, domain 2 CLSA_c01950 PF04983 RNA polymerase Rpb1, domain 3 CLSA_c01950 PF04997 RNA polymerase Rpb1, domain 1 CLSA_c01950 PF04998 RNA polymerase Rpb1, domain 5 CLSA_c01950 PF05000 RNA polymerase Rpb1, domain 4 CLSA_c01960 PF00164 Ribosomal protein S12/S23 CLSA_c01970 PF00177 Ribosomal protein S7p/S5e CLSA_c01980 PF00009 Elongation factor Tu GTP binding domain CLSA_c01980 PF00679 Elongation factor G C-terminus CLSA_c01980 PF03144 Elongation factor Tu domain 2 CLSA_c01980 PF03764 Elongation factor G, domain IV CLSA_c01980 PF14492 Elongation Factor G, domain II CLSA_c01990 PF00009 Elongation factor Tu GTP binding domain CLSA_c01990 PF03143 Elongation factor Tu C-terminal domain CLSA_c01990 PF03144 Elongation factor Tu domain 2 CLSA_c02000 PF00338 Ribosomal protein S10p/S20e CLSA_c02010 PF00297 Ribosomal protein L3 CLSA_c02020 PF00573 Ribosomal protein L4/L1 family CLSA_c02030 PF00276 Ribosomal protein L23 CLSA_c02040 PF00181 Ribosomal Proteins L2, RNA binding domain CLSA_c02040 PF03947 Ribosomal Proteins L2, C-terminal domain CLSA_c02050 PF00203 Ribosomal protein S19 CLSA_c02060 PF00237 Ribosomal protein L22p/L17e CLSA_c02070 PF00189 Ribosomal protein S3, C-terminal domain CLSA_c02070 PF07650 KH domain CLSA_c02080 PF00252 Ribosomal protein L16p/L10e CLSA_c02090 PF00831 Ribosomal L29 protein CLSA_c02100 PF00366 Ribosomal protein S17 CLSA_c02120 PF00238 Ribosomal protein L14p/L23e CLSA_c02130 PF00467 KOW motif CLSA_c02130 PF17136 CLSA_c02130 CLSA_c02140 PF00281 Ribosomal protein L5 CLSA_c02140 PF00673 ribosomal L5P family C-terminus CLSA_c02150 PF00253 Ribosomal protein S14p/S29e CLSA_c02160 PF00410 Ribosomal protein S8 CLSA_c02170 PF00347 Ribosomal protein L6 CLSA_c02180 PF00861 Ribosomal L18p/L5e family CLSA_c02190 PF00333 Ribosomal protein S5, N-terminal domain CLSA_c02190 PF03719 Ribosomal protein S5, C-terminal domain CLSA_c02200 PF00327 Ribosomal protein L30p/L7e CLSA_c02210 PF00828 Ribosomal protein L18e/L15 CLSA_c02220 PF00344 SecY translocase CLSA_c02230 PF00406 Adenylate kinase CLSA_c02230 PF05191 Adenylate kinase, active site lid CLSA_c02240 PF00557 Metallopeptidase family M24 CLSA_c02260 PF01176 Translation initiation factor 1A / IF-1 CLSA_c02270 PF00444 Ribosomal protein L36 CLSA_c02280 PF00416 Ribosomal protein S13/S18 CLSA_c02290 PF00411 Ribosomal protein S11 CLSA_c02300 PF00163 Ribosomal protein S4/S9 N-terminal domain CLSA_c02300 PF01479 S4 domain CLSA_c02310 PF01000 RNA polymerase Rpb3/RpoA insert domain CLSA_c02310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLSA_c02310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLSA_c02320 PF01196 Ribosomal protein L17 CLSA_c02330 PF00005 ABC transporter CLSA_c02340 PF00005 ABC transporter CLSA_c02350 PF02361 Cobalt transport protein CLSA_c02360 PF01416 tRNA pseudouridine synthase CLSA_c02370 PF00572 Ribosomal protein L13 CLSA_c02380 PF00380 Ribosomal protein S9/S16 CLSA_c02390 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c02400 PF05681 CLSA_c02400 CLSA_c02410 PF05683 Fumarase C-terminus CLSA_c02420 PF02588 CLSA_c02420 CLSA_c02420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLSA_c02430 PF13181 Tetratricopeptide repeat CLSA_c02440 PF00072 Response regulator receiver domain CLSA_c02440 PF00486 Transcriptional regulatory protein, C terminal CLSA_c02450 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c02460 PF00317 Ribonucleotide reductase, all-alpha domain CLSA_c02460 PF02867 Ribonucleotide reductase, barrel domain CLSA_c02470 PF00268 Ribonucleotide reductase, small chain CLSA_c02480 PF00391 PEP-utilising enzyme, mobile domain CLSA_c02480 PF02896 PEP-utilising enzyme, TIM barrel domain CLSA_c02480 PF05524 PEP-utilising enzyme, N-terminal CLSA_c02490 PF07719 Tetratricopeptide repeat CLSA_c02500 PF01979 Amidohydrolase family CLSA_c02510 PF07486 Cell Wall Hydrolase CLSA_c02530 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLSA_c02540 PF07949 YbbR-like protein CLSA_c02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c02570 PF01515 Phosphate acetyl/butaryl transferase CLSA_c02580 PF00871 Acetokinase family CLSA_c02590 PF01966 HD domain CLSA_c02600 PF00809 Pterin binding enzyme CLSA_c02610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLSA_c02610 PF02152 Dihydroneopterin aldolase CLSA_c02620 PF01987 Mitochondrial biogenesis AIM24 CLSA_c02630 PF01371 Trp repressor protein CLSA_c02640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLSA_c02640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLSA_c02640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLSA_c02640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLSA_c02650 PF00011 Hsp20/alpha crystallin family CLSA_c02670 PF01842 ACT domain CLSA_c02670 PF10369 Small subunit of acetolactate synthase CLSA_c02680 PF00682 HMGL-like CLSA_c02680 PF08502 LeuA allosteric (dimerisation) domain CLSA_c02690 PF00330 Aconitase family (aconitate hydratase) CLSA_c02700 PF00694 Aconitase C-terminal domain CLSA_c02710 PF00180 Isocitrate/isopropylmalate dehydrogenase CLSA_c02720 PF00920 Dehydratase family CLSA_c02730 PF00205 Thiamine pyrophosphate enzyme, central domain CLSA_c02730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLSA_c02730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLSA_c02740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLSA_c02740 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CLSA_c02750 PF01541 GIY-YIG catalytic domain CLSA_c02760 PF09587 Bacterial capsule synthesis protein PGA_cap CLSA_c02780 PF13437 HlyD family secretion protein CLSA_c02790 PF00005 ABC transporter CLSA_c02790 PF00664 ABC transporter transmembrane region CLSA_c02790 PF03412 Peptidase C39 family CLSA_c02800 PF13533 Biotin-lipoyl like CLSA_c02800 PF16576 CLSA_c02800 CLSA_c02810 PF00005 ABC transporter CLSA_c02820 PF02687 CLSA_c02820 CLSA_c02820 PF12704 MacB-like periplasmic core domain CLSA_c02830 PF01053 Cys/Met metabolism PLP-dependent enzyme CLSA_c02840 PF01053 Cys/Met metabolism PLP-dependent enzyme CLSA_c02850 PF01047 MarR family CLSA_c02860 PF02321 Outer membrane efflux protein CLSA_c02870 PF01380 SIS domain CLSA_c02870 PF13522 Glutamine amidotransferase domain CLSA_c02880 PF00665 Integrase core domain CLSA_c02880 PF13276 CLSA_c02880 CLSA_c02910 PF00665 Integrase core domain CLSA_c02910 PF13276 CLSA_c02910 CLSA_c03000 PF13649 Methyltransferase domain CLSA_c03020 PF00202 Aminotransferase class-III CLSA_c03040 PF00005 ABC transporter CLSA_c03050 PF12698 ABC-2 family transporter protein CLSA_c03060 PF13561 Enoyl-(Acyl carrier protein) reductase CLSA_c03070 PF02310 B12 binding domain CLSA_c03070 PF04055 Radical SAM superfamily CLSA_c03090 PF04101 Glycosyltransferase family 28 C-terminal domain CLSA_c03100 PF00483 Nucleotidyl transferase CLSA_c03100 PF00501 AMP-binding enzyme CLSA_c03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c03150 PF12729 CLSA_c03150 CLSA_c03160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c03160 PF02743 Cache domain CLSA_c03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c03170 PF00672 HAMP domain CLSA_c03170 PF02743 Cache domain CLSA_c03180 PF05962 HutD CLSA_c03190 PF01226 Formate/nitrite transporter CLSA_c03210 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLSA_c03230 PF01053 Cys/Met metabolism PLP-dependent enzyme CLSA_c03240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLSA_c03240 PF02824 TGS domain CLSA_c03240 PF03129 Anticodon binding domain CLSA_c03240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLSA_c03290 PF02542 YgbB family CLSA_c03300 PF12791 CLSA_c03300 CLSA_c03310 PF01522 Polysaccharide deacetylase CLSA_c03320 PF11738 Protein of unknown function (DUF3298) CLSA_c03320 PF13739 Domain of unknown function (DUF4163) CLSA_c03330 PF04055 Radical SAM superfamily CLSA_c03330 PF06968 Biotin and Thiamin Synthesis associated domain CLSA_c03340 PF01385 CLSA_c03340 CLSA_c03340 PF07282 CLSA_c03340 CLSA_c03340 PF12323 CLSA_c03340 CLSA_c03350 PF00171 Aldehyde dehydrogenase family CLSA_c03350 PF00465 Iron-containing alcohol dehydrogenase CLSA_c03360 PF00072 Response regulator receiver domain CLSA_c03360 PF04397 LytTr DNA-binding domain CLSA_c03390 PF02687 CLSA_c03390 CLSA_c03400 PF00005 ABC transporter CLSA_c03410 PF05708 Orthopoxvirus protein of unknown function (DUF830) CLSA_c03450 PF00122 E1-E2 ATPase CLSA_c03450 PF00689 Cation transporting ATPase, C-terminus CLSA_c03450 PF00690 Cation transporter/ATPase, N-terminus CLSA_c03450 PF00702 haloacid dehalogenase-like hydrolase CLSA_c03460 PF01734 Patatin-like phospholipase CLSA_c03470 PF00392 Bacterial regulatory proteins, gntR family CLSA_c03470 PF07729 FCD domain CLSA_c03480 PF01012 Electron transfer flavoprotein domain CLSA_c03490 PF00766 Electron transfer flavoprotein FAD-binding domain CLSA_c03490 PF01012 Electron transfer flavoprotein domain CLSA_c03500 PF01565 FAD binding domain CLSA_c03500 PF02913 FAD linked oxidases, C-terminal domain CLSA_c03510 PF02810 SEC-C motif CLSA_c03520 PF00483 Nucleotidyl transferase CLSA_c03520 PF01050 Mannose-6-phosphate isomerase CLSA_c03530 PF00882 Zinc dependent phospholipase C CLSA_c03540 PF02659 CLSA_c03540 CLSA_c03550 PF02629 CoA binding domain CLSA_c03550 PF06971 Putative DNA-binding protein N-terminus CLSA_c03560 PF00378 Enoyl-CoA hydratase/isomerase family CLSA_c03570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLSA_c03570 PF02770 Acyl-CoA dehydrogenase, middle domain CLSA_c03570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLSA_c03580 PF01012 Electron transfer flavoprotein domain CLSA_c03590 PF00766 Electron transfer flavoprotein FAD-binding domain CLSA_c03590 PF01012 Electron transfer flavoprotein domain CLSA_c03600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLSA_c03600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLSA_c03610 PF00465 Iron-containing alcohol dehydrogenase CLSA_c03620 PF00730 HhH-GPD superfamily base excision DNA repair protein CLSA_c03620 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CLSA_c03640 PF00037 4Fe-4S binding domain CLSA_c03640 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLSA_c03650 PF00166 Chaperonin 10 Kd subunit CLSA_c03660 PF00118 TCP-1/cpn60 chaperonin family CLSA_c03670 PF07963 Prokaryotic N-terminal methylation motif CLSA_c03680 PF00478 IMP dehydrogenase / GMP reductase domain CLSA_c03680 PF00571 CBS domain CLSA_c03690 PF00117 Glutamine amidotransferase class-I CLSA_c03690 PF00958 GMP synthase C terminal domain CLSA_c03690 PF03054 tRNA methyl transferase CLSA_c03710 PF00342 Phosphoglucose isomerase CLSA_c03720 PF02639 CLSA_c03720 CLSA_c03730 PF00072 Response regulator receiver domain CLSA_c03730 PF00486 Transcriptional regulatory protein, C terminal CLSA_c03740 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c03750 PF13057 CLSA_c03750 CLSA_c03760 PF13343 Bacterial extracellular solute-binding protein CLSA_c03770 PF07690 Major Facilitator Superfamily CLSA_c03780 PF07495 Y_Y_Y domain CLSA_c03790 PF01464 Transglycosylase SLT domain CLSA_c03800 PF00849 RNA pseudouridylate synthase CLSA_c03800 PF01479 S4 domain CLSA_c03810 PF00580 UvrD/REP helicase N-terminal domain CLSA_c03810 PF13361 UvrD-like helicase C-terminal domain CLSA_c03820 PF00533 BRCA1 C Terminus (BRCT) domain CLSA_c03820 PF01653 NAD-dependent DNA ligase adenylation domain CLSA_c03820 PF03120 NAD-dependent DNA ligase OB-fold domain CLSA_c03820 PF12826 Helix-hairpin-helix motif CLSA_c03820 PF14520 Helix-hairpin-helix domain CLSA_c03840 PF02686 Glu-tRNAGln amidotransferase C subunit CLSA_c03850 PF01425 Amidase CLSA_c03860 PF02637 GatB domain CLSA_c03860 PF02934 GatB/GatE catalytic domain CLSA_c03880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLSA_c03900 PF01725 Ham1 family CLSA_c03910 PF12850 Calcineurin-like phosphoesterase superfamily domain CLSA_c04110 PF00589 Phage integrase family CLSA_c04110 PF14659 Phage integrase, N-terminal SAM-like domain CLSA_c04130 PF01381 Helix-turn-helix CLSA_c04140 PF01381 Helix-turn-helix CLSA_c04150 PF12728 Helix-turn-helix domain CLSA_c04160 PF07261 Replication initiation and membrane attachment CLSA_c04160 PF09681 CLSA_c04160 CLSA_c04170 PF01695 IstB-like ATP binding protein CLSA_c04180 PF04014 Antidote-toxin recognition MazE CLSA_c04190 PF02498 CLSA_c04190 CLSA_c04190 PF03374 CLSA_c04190 CLSA_c04200 PF11148 CLSA_c04200 CLSA_c04210 PF07872 CLSA_c04210 CLSA_c04220 PF13407 Periplasmic binding protein domain CLSA_c04230 PF09924 Uncharacterized conserved protein (DUF2156) CLSA_c04260 PF01183 Glycosyl hydrolases family 25 CLSA_c04270 PF03741 CLSA_c04270 CLSA_c04280 PF01435 Peptidase family M48 CLSA_c04360 PF01609 Transposase DDE domain CLSA_c04360 PF05598 CLSA_c04360 CLSA_c04370 PF12841 CLSA_c04370 CLSA_c04400 PF04542 Sigma-70 region 2 CLSA_c04410 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c04420 PF00271 Helicase conserved C-terminal domain CLSA_c04420 PF04851 Type III restriction enzyme, res subunit CLSA_c04420 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CLSA_c04430 PF02384 N-6 DNA Methylase CLSA_c04430 PF12161 HsdM N-terminal domain CLSA_c04440 PF01420 Type I restriction modification DNA specificity domain CLSA_c04450 PF00589 Phage integrase family CLSA_c04450 PF13495 Phage integrase, N-terminal SAM-like domain CLSA_c04460 PF01420 Type I restriction modification DNA specificity domain CLSA_c04480 PF13614 AAA domain CLSA_c04500 PF00872 CLSA_c04500 CLSA_c04510 PF01381 Helix-turn-helix CLSA_c04520 PF04326 Divergent AAA domain CLSA_c04520 PF13749 ATP-dependent DNA helicase recG C-terminal CLSA_c04550 PF01554 MatE CLSA_c04600 PF01431 Peptidase family M13 CLSA_c04600 PF05649 Peptidase family M13 CLSA_c04650 PF01522 Polysaccharide deacetylase CLSA_c04660 PF01523 Putative modulator of DNA gyrase CLSA_c04670 PF01523 Putative modulator of DNA gyrase CLSA_c04680 PF00884 Sulfatase CLSA_c04700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c04710 PF13472 GDSL-like Lipase/Acylhydrolase family CLSA_c04720 PF05866 Endodeoxyribonuclease RusA CLSA_c04730 PF00814 Glycoprotease family CLSA_c04740 PF00561 alpha/beta hydrolase fold CLSA_c04750 PF13180 PDZ domain CLSA_c04750 PF13365 Trypsin-like peptidase domain CLSA_c04770 PF13416 Bacterial extracellular solute-binding protein CLSA_c04780 PF00534 Glycosyl transferases group 1 CLSA_c04790 PF01636 Phosphotransferase enzyme family CLSA_c04810 PF01633 Choline/ethanolamine kinase CLSA_c04820 PF00534 Glycosyl transferases group 1 CLSA_c04820 PF13439 Glycosyltransferase Family 4 CLSA_c04830 PF01633 Choline/ethanolamine kinase CLSA_c04840 PF05582 CLSA_c04840 CLSA_c04850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c04850 PF00672 HAMP domain CLSA_c04850 PF02743 Cache domain CLSA_c04860 PF06257 Protein of unknown function (DUF1021) CLSA_c04870 PF01476 LysM domain CLSA_c04870 PF12673 CLSA_c04870 CLSA_c04880 PF03575 Peptidase family S51 CLSA_c04890 PF02875 Mur ligase family, glutamate ligase domain CLSA_c04890 PF08245 Mur ligase middle domain CLSA_c04890 PF08443 RimK-like ATP-grasp domain CLSA_c04900 PF00288 GHMP kinases N terminal domain CLSA_c04900 PF08544 GHMP kinases C terminal CLSA_c04910 PF09551 CLSA_c04910 CLSA_c04920 PF02568 Thiamine biosynthesis protein (ThiI) CLSA_c04920 PF05670 CLSA_c04920 CLSA_c04930 PF09148 Domain of unknown function (DUF1934) CLSA_c04950 PF00117 Glutamine amidotransferase class-I CLSA_c04950 PF06418 CTP synthase N-terminus CLSA_c04960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLSA_c04960 PF07497 Rho termination factor, RNA-binding domain CLSA_c04960 PF07498 Rho termination factor, N-terminal domain CLSA_c04970 PF04101 Glycosyltransferase family 28 C-terminal domain CLSA_c04970 PF06925 CLSA_c04970 CLSA_c04980 PF01197 Ribosomal protein L31 CLSA_c04990 PF00265 Thymidine kinase CLSA_c05000 PF05175 Methyltransferase small domain CLSA_c05000 PF07136 CLSA_c05000 CLSA_c05010 PF00472 RF-1 domain CLSA_c05010 PF03462 PCRF domain CLSA_c05030 PF01300 Telomere recombination CLSA_c05030 PF03481 Putative GTP-binding controlling metal-binding CLSA_c05040 PF02502 Ribose/Galactose Isomerase CLSA_c05050 PF14681 Uracil phosphoribosyltransferase CLSA_c05060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLSA_c05070 PF02350 UDP-N-acetylglucosamine 2-epimerase CLSA_c05080 PF00108 Thiolase, N-terminal domain CLSA_c05080 PF02803 Thiolase, C-terminal domain CLSA_c05090 PF00119 ATP synthase A chain CLSA_c05100 PF00137 ATP synthase subunit C CLSA_c05110 PF00430 ATP synthase B/B' CF(0) CLSA_c05120 PF00213 ATP synthase delta (OSCP) subunit CLSA_c05130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLSA_c05130 PF00306 ATP synthase alpha/beta chain, C terminal domain CLSA_c05130 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLSA_c05140 PF00231 ATP synthase CLSA_c05150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLSA_c05150 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLSA_c05160 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLSA_c05160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLSA_c05180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLSA_c05190 PF08486 CLSA_c05190 CLSA_c05200 PF01551 Peptidase family M23 CLSA_c05210 PF12116 Stage III sporulation protein D CLSA_c05220 PF06723 MreB/Mbl protein CLSA_c05230 PF06866 CLSA_c05230 CLSA_c05320 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLSA_c05320 PF02772 S-adenosylmethionine synthetase, central domain CLSA_c05320 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLSA_c05330 PF13538 UvrD-like helicase C-terminal domain CLSA_c05330 PF13604 AAA domain CLSA_c05330 PF14490 Helix-hairpin-helix containing domain CLSA_c05330 PF14520 Helix-hairpin-helix domain CLSA_c05350 PF00156 Phosphoribosyl transferase domain CLSA_c05360 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLSA_c05360 PF16321 CLSA_c05360 CLSA_c05370 PF01043 SecA preprotein cross-linking domain CLSA_c05370 PF02810 SEC-C motif CLSA_c05370 PF07516 SecA Wing and Scaffold domain CLSA_c05370 PF07517 SecA DEAD-like domain CLSA_c05380 PF00472 RF-1 domain CLSA_c05380 PF03462 PCRF domain CLSA_c05390 PF04389 Peptidase family M28 CLSA_c05420 PF00072 Response regulator receiver domain CLSA_c05420 PF00486 Transcriptional regulatory protein, C terminal CLSA_c05430 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c05440 PF02517 CAAX protease self-immunity CLSA_c05450 PF00575 S1 RNA binding domain CLSA_c05450 PF09371 Tex-like protein N-terminal domain CLSA_c05450 PF12836 Helix-hairpin-helix motif CLSA_c05450 PF16921 CLSA_c05450 CLSA_c05470 PF01546 Peptidase family M20/M25/M40 CLSA_c05470 PF07687 Peptidase dimerisation domain CLSA_c05480 PF14196 CLSA_c05480 CLSA_c05490 PF03807 NADP oxidoreductase coenzyme F420-dependent CLSA_c05490 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLSA_c05500 PF00892 EamA-like transporter family CLSA_c05510 PF00892 EamA-like transporter family CLSA_c05520 PF04055 Radical SAM superfamily CLSA_c05520 PF13186 Iron-sulfur cluster-binding domain CLSA_c05520 PF13353 4Fe-4S single cluster domain CLSA_c05530 PF00293 NUDIX domain CLSA_c05540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLSA_c05540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLSA_c05560 PF04246 CLSA_c05560 CLSA_c05570 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLSA_c05570 PF10531 SLBB domain CLSA_c05570 PF13237 4Fe-4S dicluster domain CLSA_c05570 PF13375 RnfC Barrel sandwich hybrid domain CLSA_c05580 PF03116 CLSA_c05580 CLSA_c05590 PF04205 FMN-binding domain CLSA_c05600 PF02508 CLSA_c05600 CLSA_c05610 PF02508 CLSA_c05610 CLSA_c05620 PF04060 Putative Fe-S cluster CLSA_c05620 PF13187 4Fe-4S dicluster domain CLSA_c05630 PF02424 ApbE family CLSA_c05640 PF07009 Protein of unknown function (DUF1312) CLSA_c05650 PF07456 CLSA_c05650 CLSA_c05680 PF00440 Bacterial regulatory proteins, tetR family CLSA_c05680 PF13305 WHG domain CLSA_c05690 PF01814 Hemerythrin HHE cation binding domain CLSA_c05700 PF12822 Protein of unknown function (DUF3816) CLSA_c05710 PF13673 Acetyltransferase (GNAT) domain CLSA_c05720 PF00814 Glycoprotease family CLSA_c05730 PF02367 Uncharacterised P-loop hydrolase UPF0079 CLSA_c05740 PF01297 Periplasmic solute binding protein family CLSA_c05760 PF00072 Response regulator receiver domain CLSA_c05760 PF04397 LytTr DNA-binding domain CLSA_c05770 PF14501 GHKL domain CLSA_c05780 PF04647 CLSA_c05780 CLSA_c05790 PF00561 alpha/beta hydrolase fold CLSA_c05800 PF00005 ABC transporter CLSA_c05810 PF02687 CLSA_c05810 CLSA_c05820 PF01554 MatE CLSA_c05830 PF01936 NYN domain CLSA_c05830 PF12872 OST-HTH/LOTUS domain CLSA_c05840 PF01909 Nucleotidyltransferase domain CLSA_c05870 PF02915 Rubrerythrin CLSA_c05880 PF00258 Flavodoxin CLSA_c05880 PF00753 Metallo-beta-lactamase superfamily CLSA_c05890 PF01042 Endoribonuclease L-PSP CLSA_c05900 PF03060 Nitronate monooxygenase CLSA_c05930 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c05940 PF00149 Calcineurin-like phosphoesterase CLSA_c05950 PF13476 AAA domain CLSA_c05960 PF01297 Periplasmic solute binding protein family CLSA_c05970 PF00488 MutS domain V CLSA_c05980 PF00929 Exonuclease CLSA_c05990 PF00571 CBS domain CLSA_c06030 PF04012 CLSA_c06030 CLSA_c06050 PF00575 S1 RNA binding domain CLSA_c06060 PF00224 Pyruvate kinase, barrel domain CLSA_c06060 PF02887 Pyruvate kinase, alpha/beta domain CLSA_c06070 PF01546 Peptidase family M20/M25/M40 CLSA_c06070 PF07687 Peptidase dimerisation domain CLSA_c06080 PF00877 NlpC/P60 family CLSA_c06100 PF02545 Maf-like protein CLSA_c06110 PF04002 RadC-like JAB domain CLSA_c06120 PF06723 MreB/Mbl protein CLSA_c06130 PF04085 rod shape-determining protein MreC CLSA_c06140 PF04093 CLSA_c06140 CLSA_c06150 PF00905 Penicillin binding protein transpeptidase domain CLSA_c06150 PF03717 Penicillin-binding Protein dimerisation domain CLSA_c06160 PF03749 Sugar fermentation stimulation protein CLSA_c06170 PF03775 Septum formation inhibitor MinC, C-terminal domain CLSA_c06180 PF13614 AAA domain CLSA_c06190 PF03776 Septum formation topological specificity factor MinE CLSA_c06200 PF01098 CLSA_c06200 CLSA_c06220 PF02163 Peptidase family M50 CLSA_c06230 PF00395 S-layer homology domain CLSA_c06230 PF03413 Peptidase propeptide and YPEB domain CLSA_c06240 PF00072 Response regulator receiver domain CLSA_c06240 PF00486 Transcriptional regulatory protein, C terminal CLSA_c06250 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c06260 PF00005 ABC transporter CLSA_c06270 PF12730 CLSA_c06270 CLSA_c06280 PF12730 CLSA_c06280 CLSA_c06300 PF00072 Response regulator receiver domain CLSA_c06300 PF00486 Transcriptional regulatory protein, C terminal CLSA_c06310 PF00005 ABC transporter CLSA_c06320 PF12730 CLSA_c06320 CLSA_c06330 PF00005 ABC transporter CLSA_c06340 PF02687 CLSA_c06340 CLSA_c06350 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c06360 PF04286 CLSA_c06360 CLSA_c06370 PF04055 Radical SAM superfamily CLSA_c06380 PF10105 CLSA_c06380 CLSA_c06390 PF10150 Ribonuclease E/G family CLSA_c06400 PF00829 Ribosomal prokaryotic L21 protein CLSA_c06410 PF04327 Protein of unknown function (DUF464) CLSA_c06420 PF01016 Ribosomal L27 protein CLSA_c06430 PF01018 GTP1/OBG CLSA_c06430 PF01926 50S ribosome-binding GTPase CLSA_c06430 PF09269 Domain of unknown function (DUF1967) CLSA_c06440 PF01985 CRS1 / YhbY (CRM) domain CLSA_c06450 PF01467 Cytidylyltransferase CLSA_c06460 PF01966 HD domain CLSA_c06470 PF03816 Cell envelope-related transcriptional attenuator domain CLSA_c06470 PF13399 LytR cell envelope-related transcriptional attenuator CLSA_c06480 PF00849 RNA pseudouridylate synthase CLSA_c06490 PF00768 D-alanyl-D-alanine carboxypeptidase CLSA_c06490 PF07943 Penicillin-binding protein 5, C-terminal domain CLSA_c06500 PF10531 SLBB domain CLSA_c06500 PF12836 Helix-hairpin-helix motif CLSA_c06530 PF05958 tRNA (Uracil-5-)-methyltransferase CLSA_c06550 PF05598 CLSA_c06550 CLSA_c06560 PF04986 CLSA_c06560 CLSA_c06560 PF14319 CLSA_c06560 CLSA_c06570 PF02342 TerD domain CLSA_c06570 PF05099 Tellurite resistance protein TerB CLSA_c06580 PF02342 TerD domain CLSA_c06590 PF02342 TerD domain CLSA_c06600 PF02342 TerD domain CLSA_c06610 PF03741 CLSA_c06610 CLSA_c06620 PF02342 TerD domain CLSA_c06630 PF14020 CLSA_c06630 CLSA_c06640 PF02342 TerD domain CLSA_c06640 PF10138 CLSA_c06640 CLSA_c06650 PF00012 Hsp70 protein CLSA_c06660 PF00012 Hsp70 protein CLSA_c06680 PF00012 Hsp70 protein CLSA_c06700 PF00005 ABC transporter CLSA_c06720 PF00331 Glycosyl hydrolase family 10 CLSA_c06720 PF14200 Ricin-type beta-trefoil lectin domain-like CLSA_c06730 PF04616 Glycosyl hydrolases family 43 CLSA_c06730 PF14200 Ricin-type beta-trefoil lectin domain-like CLSA_c06740 PF00149 Calcineurin-like phosphoesterase CLSA_c06740 PF01473 Putative cell wall binding repeat CLSA_c06740 PF02872 5'-nucleotidase, C-terminal domain CLSA_c06750 PF02554 CLSA_c06750 CLSA_c06750 PF13722 CLSA_c06750 CLSA_c06760 PF13091 PLD-like domain CLSA_c06760 PF13396 CLSA_c06760 CLSA_c06770 PF12832 MFS_1 like family CLSA_c06790 PF07833 Copper amine oxidase N-terminal domain CLSA_c06790 PF10096 CLSA_c06790 CLSA_c06800 PF00793 DAHP synthetase I family CLSA_c06810 PF01761 3-dehydroquinate synthase CLSA_c06820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLSA_c06830 PF01264 Chorismate synthase CLSA_c06840 PF00800 Prephenate dehydratase CLSA_c06840 PF01817 Chorismate mutase type II CLSA_c06850 PF08501 Shikimate dehydrogenase substrate binding domain CLSA_c06860 PF01202 Shikimate kinase CLSA_c06880 PF00793 DAHP synthetase I family CLSA_c06890 PF02153 Prephenate dehydrogenase CLSA_c06900 PF03422 Carbohydrate binding module (family 6) CLSA_c06900 PF04616 Glycosyl hydrolases family 43 CLSA_c06910 PF01522 Polysaccharide deacetylase CLSA_c06920 PF00072 Response regulator receiver domain CLSA_c06920 PF04397 LytTr DNA-binding domain CLSA_c06930 PF14501 GHKL domain CLSA_c06940 PF04892 CLSA_c06940 CLSA_c06970 PF00488 MutS domain V CLSA_c06970 PF05192 MutS domain III CLSA_c06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c06980 PF03466 LysR substrate binding domain CLSA_c06990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLSA_c06990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c07000 PF08501 Shikimate dehydrogenase substrate binding domain CLSA_c07020 PF07690 Major Facilitator Superfamily CLSA_c07030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLSA_c07030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c07040 PF08501 Shikimate dehydrogenase substrate binding domain CLSA_c07050 PF07690 Major Facilitator Superfamily CLSA_c07060 PF06874 CLSA_c07060 CLSA_c07070 PF01928 CYTH domain CLSA_c07080 PF04245 CLSA_c07080 CLSA_c07090 PF00266 Aminotransferase class-V CLSA_c07110 PF01381 Helix-turn-helix CLSA_c07120 PF00717 Peptidase S24-like CLSA_c07140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLSA_c07140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLSA_c07150 PF00202 Aminotransferase class-III CLSA_c07160 PF00696 Amino acid kinase family CLSA_c07170 PF01960 ArgJ family CLSA_c07180 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLSA_c07180 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLSA_c07190 PF00206 Lyase CLSA_c07190 PF14698 Argininosuccinate lyase C-terminal CLSA_c07200 PF00764 Arginosuccinate synthase CLSA_c07210 PF14276 CLSA_c07210 CLSA_c07220 PF04239 Protein of unknown function (DUF421) CLSA_c07230 PF00485 Phosphoribulokinase / Uridine kinase family CLSA_c07240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c07240 PF12729 CLSA_c07240 CLSA_c07250 PF01842 ACT domain CLSA_c07250 PF03315 Serine dehydratase beta chain CLSA_c07260 PF03313 CLSA_c07260 CLSA_c07270 PF00072 Response regulator receiver domain CLSA_c07270 PF00486 Transcriptional regulatory protein, C terminal CLSA_c07280 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c07290 PF02424 ApbE family CLSA_c07300 PF04205 FMN-binding domain CLSA_c07300 PF12801 CLSA_c07300 CLSA_c07320 PF00082 Subtilase family CLSA_c07330 PF00082 Subtilase family CLSA_c07340 PF09512 CLSA_c07340 CLSA_c07350 PF08543 Phosphomethylpyrimidine kinase CLSA_c07360 PF01964 ThiC family CLSA_c07370 PF02110 Hydroxyethylthiazole kinase family CLSA_c07380 PF02581 Thiamine monophosphate synthase/TENI CLSA_c07390 PF00990 GGDEF domain CLSA_c07390 PF08269 Cache domain CLSA_c07400 PF00270 DEAD/DEAH box helicase CLSA_c07400 PF00271 Helicase conserved C-terminal domain CLSA_c07400 PF00570 HRDC domain CLSA_c07400 PF09382 RQC domain CLSA_c07400 PF16124 CLSA_c07400 CLSA_c07410 PF02811 PHP domain CLSA_c07420 PF00005 ABC transporter CLSA_c07430 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c07440 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c07450 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c07460 PF01263 Aldose 1-epimerase CLSA_c07470 PF00072 Response regulator receiver domain CLSA_c07470 PF12833 Helix-turn-helix domain CLSA_c07480 PF13407 Periplasmic binding protein domain CLSA_c07490 PF13407 Periplasmic binding protein domain CLSA_c07500 PF00005 ABC transporter CLSA_c07510 PF02653 CLSA_c07510 CLSA_c07520 PF02653 CLSA_c07520 CLSA_c07530 PF00672 HAMP domain CLSA_c07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c07530 PF02743 Cache domain CLSA_c07530 PF06580 CLSA_c07530 CLSA_c07540 PF13347 MFS/sugar transport protein CLSA_c07550 PF08282 haloacid dehalogenase-like hydrolase CLSA_c07560 PF02610 L-arabinose isomerase CLSA_c07560 PF11762 L-arabinose isomerase C-terminal domain CLSA_c07570 PF00392 Bacterial regulatory proteins, gntR family CLSA_c07570 PF13377 Periplasmic binding protein-like domain CLSA_c07580 PF00596 Class II Aldolase and Adducin N-terminal domain CLSA_c07590 PF00923 Transaldolase CLSA_c07600 PF00456 Transketolase, thiamine diphosphate binding domain CLSA_c07600 PF02779 Transketolase, pyrimidine binding domain CLSA_c07600 PF02780 Transketolase, C-terminal domain CLSA_c07610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLSA_c07610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLSA_c07620 PF00083 Sugar (and other) transporter CLSA_c07640 PF04055 Radical SAM superfamily CLSA_c07640 PF06968 Biotin and Thiamin Synthesis associated domain CLSA_c07650 PF13407 Periplasmic binding protein domain CLSA_c07660 PF00484 Carbonic anhydrase CLSA_c07680 PF08495 CLSA_c07680 CLSA_c07680 PF10442 CLSA_c07680 CLSA_c07690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c07720 PF13031 CLSA_c07720 CLSA_c07740 PF02675 S-adenosylmethionine decarboxylase CLSA_c07750 PF01276 Orn/Lys/Arg decarboxylase, major domain CLSA_c07750 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLSA_c07760 PF01564 Spermine/spermidine synthase CLSA_c07760 PF17284 CLSA_c07760 CLSA_c07770 PF03435 Saccharopine dehydrogenase CLSA_c07770 PF16653 CLSA_c07770 CLSA_c07790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLSA_c07810 PF05954 Phage late control gene D protein (GPD) CLSA_c07830 PF05954 Phage late control gene D protein (GPD) CLSA_c07840 PF13599 Pentapeptide repeats (9 copies) CLSA_c07860 PF14107 CLSA_c07860 CLSA_c07870 PF05593 CLSA_c07870 CLSA_c07870 PF05954 Phage late control gene D protein (GPD) CLSA_c07950 PF14433 CLSA_c07950 CLSA_c07960 PF13495 Phage integrase, N-terminal SAM-like domain CLSA_c07970 PF14412 CLSA_c07970 CLSA_c08040 PF00226 DnaJ domain CLSA_c08050 PF00498 FHA domain CLSA_c08060 PF00498 FHA domain CLSA_c08070 PF13672 Protein phosphatase 2C CLSA_c08170 PF14107 CLSA_c08170 CLSA_c08180 PF01473 Putative cell wall binding repeat CLSA_c08180 PF05954 Phage late control gene D protein (GPD) CLSA_c08270 PF17117 CLSA_c08270 CLSA_c08280 PF17117 CLSA_c08280 CLSA_c08310 PF05954 Phage late control gene D protein (GPD) CLSA_c08330 PF14107 CLSA_c08330 CLSA_c08340 PF05593 CLSA_c08340 CLSA_c08340 PF05954 Phage late control gene D protein (GPD) CLSA_c08340 PF14449 CLSA_c08340 CLSA_c08390 PF14412 CLSA_c08390 CLSA_c08400 PF14136 CLSA_c08400 CLSA_c08430 PF00501 AMP-binding enzyme CLSA_c08430 PF00550 Phosphopantetheine attachment site CLSA_c08430 PF00668 Condensation domain CLSA_c08430 PF07993 Male sterility protein CLSA_c08430 PF13193 AMP-binding enzyme C-terminal domain CLSA_c08440 PF09935 CLSA_c08440 CLSA_c08450 PF17118 CLSA_c08450 CLSA_c08460 PF09414 RNA ligase CLSA_c08470 PF01966 HD domain CLSA_c08470 PF13671 AAA domain CLSA_c08480 PF08719 Domain of unknown function (DUF1768) CLSA_c08490 PF00491 Arginase family CLSA_c08500 PF00356 Bacterial regulatory proteins, lacI family CLSA_c08500 PF13377 Periplasmic binding protein-like domain CLSA_c08510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CLSA_c08510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CLSA_c08520 PF01370 NAD dependent epimerase/dehydratase family CLSA_c08530 PF00288 GHMP kinases N terminal domain CLSA_c08530 PF08544 GHMP kinases C terminal CLSA_c08530 PF10509 Galactokinase galactose-binding signature CLSA_c08540 PF07722 Peptidase C26 CLSA_c08550 PF12724 Flavodoxin domain CLSA_c08560 PF00881 Nitroreductase family CLSA_c08570 PF00291 Pyridoxal-phosphate dependent enzyme CLSA_c08580 PF00465 Iron-containing alcohol dehydrogenase CLSA_c08590 PF00005 ABC transporter CLSA_c08600 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c08610 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c08620 PF07905 CLSA_c08620 CLSA_c08620 PF13556 PucR C-terminal helix-turn-helix domain CLSA_c08630 PF00202 Aminotransferase class-III CLSA_c08640 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CLSA_c08650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CLSA_c08660 PF02311 AraC-like ligand binding domain CLSA_c08660 PF12833 Helix-turn-helix domain CLSA_c08670 PF02065 Melibiase CLSA_c08670 PF16874 CLSA_c08670 CLSA_c08670 PF16875 CLSA_c08670 CLSA_c08680 PF00392 Bacterial regulatory proteins, gntR family CLSA_c08690 PF00005 ABC transporter CLSA_c08700 PF13346 CLSA_c08700 CLSA_c08720 PF12804 MobA-like NTP transferase domain CLSA_c08730 PF01467 Cytidylyltransferase CLSA_c08730 PF13714 Phosphoenolpyruvate phosphomutase CLSA_c08740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLSA_c08740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLSA_c08750 PF00266 Aminotransferase class-V CLSA_c08760 PF13649 Methyltransferase domain CLSA_c08770 PF04647 CLSA_c08770 CLSA_c08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c08800 PF00175 Oxidoreductase NAD-binding domain CLSA_c08800 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLSA_c08810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c08810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLSA_c08830 PF13518 Helix-turn-helix domain CLSA_c08840 PF00665 Integrase core domain CLSA_c08890 PF13280 CLSA_c08890 CLSA_c08900 PF01926 50S ribosome-binding GTPase CLSA_c08910 PF01926 50S ribosome-binding GTPase CLSA_c08940 PF02424 ApbE family CLSA_c08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c08950 PF03466 LysR substrate binding domain CLSA_c08960 PF03358 NADPH-dependent FMN reductase CLSA_c08970 PF00890 FAD binding domain CLSA_c08970 PF03358 NADPH-dependent FMN reductase CLSA_c08970 PF04205 FMN-binding domain CLSA_c09010 PF00872 CLSA_c09010 CLSA_c09020 PF14267 CLSA_c09020 CLSA_c09030 PF01420 Type I restriction modification DNA specificity domain CLSA_c09040 PF02384 N-6 DNA Methylase CLSA_c09050 PF01609 Transposase DDE domain CLSA_c09060 PF02384 N-6 DNA Methylase CLSA_c09070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLSA_c09070 PF04851 Type III restriction enzyme, res subunit CLSA_c09080 PF13443 Cro/C1-type HTH DNA-binding domain CLSA_c09090 PF13476 AAA domain CLSA_c09130 PF04545 Sigma-70, region 4 CLSA_c09150 PF10926 CLSA_c09150 CLSA_c09160 PF10991 Protein of unknown function (DUF2815) CLSA_c09180 PF02498 CLSA_c09180 CLSA_c09180 PF03374 CLSA_c09180 CLSA_c09200 PF12784 CLSA_c09200 CLSA_c09220 PF09820 CLSA_c09220 CLSA_c09230 PF08011 CLSA_c09230 CLSA_c09240 PF10703 Molybdenum cofactor biosynthesis protein F CLSA_c09240 PF17409 CLSA_c09240 CLSA_c09250 PF13411 MerR HTH family regulatory protein CLSA_c09280 PF00239 Resolvase, N terminal domain CLSA_c09280 PF13411 MerR HTH family regulatory protein CLSA_c09290 PF01385 CLSA_c09290 CLSA_c09290 PF07282 CLSA_c09290 CLSA_c09290 PF12323 CLSA_c09290 CLSA_c09310 PF13280 CLSA_c09310 CLSA_c09320 PF13280 CLSA_c09320 CLSA_c09330 PF00069 Protein kinase domain CLSA_c09340 PF00436 Single-strand binding protein family CLSA_c09350 PF12840 Helix-turn-helix domain CLSA_c09360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLSA_c09370 PF00999 Sodium/hydrogen exchanger family CLSA_c09390 PF09681 CLSA_c09390 CLSA_c09410 PF02055 O-Glycosyl hydrolase family 30 CLSA_c09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c09430 PF02743 Cache domain CLSA_c09440 PF13304 AAA domain CLSA_c09450 PF00145 C-5 cytosine-specific DNA methylase CLSA_c09460 PF00665 Integrase core domain CLSA_c09460 PF13276 CLSA_c09460 CLSA_c09490 PF05598 CLSA_c09490 CLSA_c09510 PF03235 CLSA_c09510 CLSA_c09520 PF03235 CLSA_c09520 CLSA_c09530 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CLSA_c09540 PF00005 ABC transporter CLSA_c09550 PF02687 CLSA_c09550 CLSA_c09560 PF00005 ABC transporter CLSA_c09570 PF01433 Peptidase family M1 CLSA_c09590 PF00072 Response regulator receiver domain CLSA_c09590 PF00486 Transcriptional regulatory protein, C terminal CLSA_c09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c09610 PF01979 Amidohydrolase family CLSA_c09620 PF00392 Bacterial regulatory proteins, gntR family CLSA_c09620 PF07702 UTRA domain CLSA_c09630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLSA_c09640 PF03610 PTS system fructose IIA component CLSA_c09640 PF03830 PTS system sorbose subfamily IIB component CLSA_c09650 PF03609 CLSA_c09650 CLSA_c09660 PF03613 CLSA_c09660 CLSA_c09670 PF06115 CLSA_c09670 CLSA_c09680 PF13751 CLSA_c09680 CLSA_c09710 PF03412 Peptidase C39 family CLSA_c09720 PF01721 Class II bacteriocin CLSA_c09730 PF08951 Enterocin A Immunity CLSA_c09770 PF00005 ABC transporter CLSA_c09770 PF00664 ABC transporter transmembrane region CLSA_c09770 PF03412 Peptidase C39 family CLSA_c09780 PF13437 HlyD family secretion protein CLSA_c09780 PF13533 Biotin-lipoyl like CLSA_c09810 PF00872 CLSA_c09810 CLSA_c09820 PF00232 Glycosyl hydrolase family 1 CLSA_c09830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c09840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLSA_c09840 PF00874 PRD domain CLSA_c09840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c09840 PF05043 Mga helix-turn-helix domain CLSA_c09840 PF08279 HTH domain CLSA_c09850 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLSA_c09870 PF02378 Phosphotransferase system, EIIC CLSA_c09880 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CLSA_c09890 PF03812 CLSA_c09890 CLSA_c09900 PF00150 Cellulase (glycosyl hydrolase family 5) CLSA_c09900 PF00553 Cellulose binding domain CLSA_c09900 PF13290 CLSA_c09900 CLSA_c09910 PF00480 ROK family CLSA_c09920 PF00232 Glycosyl hydrolase family 1 CLSA_c09930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c09940 PF02378 Phosphotransferase system, EIIC CLSA_c09950 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLSA_c09960 PF00356 Bacterial regulatory proteins, lacI family CLSA_c09960 PF13377 Periplasmic binding protein-like domain CLSA_c09970 PF00550 Phosphopantetheine attachment site CLSA_c09970 PF07993 Male sterility protein CLSA_c09980 PF00501 AMP-binding enzyme CLSA_c09980 PF00668 Condensation domain CLSA_c09990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c10000 PF13231 CLSA_c10000 CLSA_c10010 PF00375 Sodium:dicarboxylate symporter family CLSA_c10020 PF13231 CLSA_c10020 CLSA_c10040 PF06445 GyrI-like small molecule binding domain CLSA_c10040 PF12833 Helix-turn-helix domain CLSA_c10050 PF14424 CLSA_c10050 CLSA_c10060 PF00156 Phosphoribosyl transferase domain CLSA_c10070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLSA_c10070 PF00367 phosphotransferase system, EIIB CLSA_c10070 PF02378 Phosphotransferase system, EIIC CLSA_c10080 PF00874 PRD domain CLSA_c10080 PF03123 CAT RNA binding domain CLSA_c10090 PF00005 ABC transporter CLSA_c10090 PF04397 LytTr DNA-binding domain CLSA_c10100 PF00005 ABC transporter CLSA_c10110 PF12698 ABC-2 family transporter protein CLSA_c10140 PF16576 CLSA_c10140 CLSA_c10150 PF16576 CLSA_c10150 CLSA_c10160 PF07690 Major Facilitator Superfamily CLSA_c10170 PF01047 MarR family CLSA_c10180 PF01618 CLSA_c10180 CLSA_c10190 PF00691 OmpA family CLSA_c10190 PF13677 CLSA_c10190 CLSA_c10200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c10200 PF00672 HAMP domain CLSA_c10200 PF02743 Cache domain CLSA_c10210 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CLSA_c10210 PF00364 Biotin-requiring enzyme CLSA_c10210 PF00682 HMGL-like CLSA_c10210 PF02436 Conserved carboxylase domain CLSA_c10210 PF02785 Biotin carboxylase C-terminal domain CLSA_c10210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLSA_c10220 PF02502 Ribose/Galactose Isomerase CLSA_c10230 PF03030 Inorganic H+ pyrophosphatase CLSA_c10240 PF00266 Aminotransferase class-V CLSA_c10250 PF07155 ECF-type riboflavin transporter, S component CLSA_c10260 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CLSA_c10270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLSA_c10280 PF01380 SIS domain CLSA_c10280 PF01418 Helix-turn-helix domain, rpiR family CLSA_c10290 PF00248 Aldo/keto reductase family CLSA_c10340 PF07969 Amidohydrolase family CLSA_c10350 PF01053 Cys/Met metabolism PLP-dependent enzyme CLSA_c10360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c10370 PF00085 Thioredoxin CLSA_c10380 PF01047 MarR family CLSA_c10390 PF00027 Cyclic nucleotide-binding domain CLSA_c10390 PF13545 Crp-like helix-turn-helix domain CLSA_c10400 PF00455 CLSA_c10400 CLSA_c10400 PF08220 DeoR-like helix-turn-helix domain CLSA_c10410 PF01791 DeoC/LacD family aldolase CLSA_c10420 PF03063 Prismane/CO dehydrogenase family CLSA_c10430 PF00571 CBS domain CLSA_c10430 PF01595 CLSA_c10430 CLSA_c10430 PF03471 Transporter associated domain CLSA_c10440 PF13520 Amino acid permease CLSA_c10460 PF00005 ABC transporter CLSA_c10470 PF00392 Bacterial regulatory proteins, gntR family CLSA_c10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c10480 PF10114 CLSA_c10480 CLSA_c10490 PF02445 Quinolinate synthetase A protein CLSA_c10500 PF00890 FAD binding domain CLSA_c10510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLSA_c10510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLSA_c10520 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c10520 PF00672 HAMP domain CLSA_c10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c10530 PF00072 Response regulator receiver domain CLSA_c10530 PF00486 Transcriptional regulatory protein, C terminal CLSA_c10550 PF16576 CLSA_c10550 CLSA_c10560 PF00005 ABC transporter CLSA_c10570 PF02687 CLSA_c10570 CLSA_c10570 PF12704 MacB-like periplasmic core domain CLSA_c10580 PF01473 Putative cell wall binding repeat CLSA_c10580 PF12733 CLSA_c10580 CLSA_c10590 PF13518 Helix-turn-helix domain CLSA_c10600 PF00665 Integrase core domain CLSA_c10610 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c10620 PF00672 HAMP domain CLSA_c10620 PF02743 Cache domain CLSA_c10640 PF00037 4Fe-4S binding domain CLSA_c10650 PF05362 Lon protease (S16) C-terminal proteolytic domain CLSA_c10650 PF13654 AAA domain CLSA_c10660 PF01740 STAS domain CLSA_c10670 PF13581 Histidine kinase-like ATPase domain CLSA_c10680 PF04542 Sigma-70 region 2 CLSA_c10680 PF04545 Sigma-70, region 4 CLSA_c10690 PF03862 CLSA_c10690 CLSA_c10700 PF07451 Stage V sporulation protein AD (SpoVAD) CLSA_c10710 PF03862 CLSA_c10710 CLSA_c10720 PF00122 E1-E2 ATPase CLSA_c10720 PF00690 Cation transporter/ATPase, N-terminus CLSA_c10720 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit CLSA_c10730 PF03772 CLSA_c10730 CLSA_c10740 PF06144 DNA polymerase III, delta subunit CLSA_c10750 PF01649 Ribosomal protein S20 CLSA_c10760 PF03418 Germination protease CLSA_c10770 PF07454 CLSA_c10770 CLSA_c10780 PF00665 Integrase core domain CLSA_c10780 PF13276 CLSA_c10780 CLSA_c10800 PF00009 Elongation factor Tu GTP binding domain CLSA_c10800 PF00679 Elongation factor G C-terminus CLSA_c10800 PF03144 Elongation factor Tu domain 2 CLSA_c10800 PF06421 GTP-binding protein LepA C-terminus CLSA_c10820 PF04055 Radical SAM superfamily CLSA_c10820 PF06969 HemN C-terminal domain CLSA_c10830 PF01628 HrcA protein C terminal domain CLSA_c10830 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CLSA_c10840 PF01025 GrpE CLSA_c10850 PF00012 Hsp70 protein CLSA_c10860 PF00226 DnaJ domain CLSA_c10860 PF00684 DnaJ central domain CLSA_c10860 PF01556 DnaJ C terminal domain CLSA_c10870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c10870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c10880 PF02390 Putative methyltransferase CLSA_c10890 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CLSA_c10900 PF04452 RNA methyltransferase CLSA_c10910 PF00919 Uncharacterized protein family UPF0004 CLSA_c10910 PF01938 TRAM domain CLSA_c10910 PF04055 Radical SAM superfamily CLSA_c10920 PF01230 HIT domain CLSA_c10930 PF01165 Ribosomal protein S21 CLSA_c10940 PF09424 Yqey-like protein CLSA_c10950 PF07873 YabP family CLSA_c10960 PF06898 CLSA_c10960 CLSA_c10970 PF01966 HD domain CLSA_c10970 PF07697 CLSA_c10970 CLSA_c10970 PF07698 CLSA_c10970 CLSA_c10980 PF02130 Uncharacterized protein family UPF0054 CLSA_c10990 PF01219 Prokaryotic diacylglycerol kinase CLSA_c10990 PF01569 PAP2 superfamily CLSA_c11000 PF01926 50S ribosome-binding GTPase CLSA_c11000 PF07650 KH domain CLSA_c11010 PF02565 Recombination protein O C terminal CLSA_c11010 PF11967 Recombination protein O N terminal CLSA_c11020 PF14242 CLSA_c11020 CLSA_c11030 PF00571 CBS domain CLSA_c11030 PF08279 HTH domain CLSA_c11040 PF00391 PEP-utilising enzyme, mobile domain CLSA_c11040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLSA_c11040 PF02896 PEP-utilising enzyme, TIM barrel domain CLSA_c11050 PF01636 Phosphotransferase enzyme family CLSA_c11060 PF01966 HD domain CLSA_c11060 PF13286 Phosphohydrolase-associated domain CLSA_c11070 PF01807 CHC2 zinc finger CLSA_c11070 PF08275 DNA primase catalytic core, N-terminal domain CLSA_c11070 PF10410 DnaB-helicase binding domain of primase CLSA_c11070 PF13155 Toprim-like CLSA_c11080 PF00140 Sigma-70 factor, region 1 CLSA_c11080 PF03979 Sigma-70 factor, region 1 CLSA_c11080 PF04539 Sigma-70 region 3 CLSA_c11080 PF04542 Sigma-70 region 2 CLSA_c11080 PF04545 Sigma-70, region 4 CLSA_c11090 PF04816 Family of unknown function (DUF633) CLSA_c11100 PF01784 NIF3 (NGG1p interacting factor 3) CLSA_c11120 PF00589 Phage integrase family CLSA_c11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c11180 PF00072 Response regulator receiver domain CLSA_c11180 PF01381 Helix-turn-helix CLSA_c11210 PF03323 CLSA_c11210 CLSA_c11220 PF00082 Subtilase family CLSA_c11230 PF00082 Subtilase family CLSA_c11240 PF01841 Transglutaminase-like superfamily CLSA_c11250 PF02446 4-alpha-glucanotransferase CLSA_c11260 PF00343 Carbohydrate phosphorylase CLSA_c11270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLSA_c11270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLSA_c11280 PF08282 haloacid dehalogenase-like hydrolase CLSA_c11290 PF02811 PHP domain CLSA_c11300 PF00117 Glutamine amidotransferase class-I CLSA_c11310 PF00425 chorismate binding enzyme CLSA_c11310 PF04715 Anthranilate synthase component I, N terminal region CLSA_c11320 PF01063 Aminotransferase class IV CLSA_c11330 PF00708 Acylphosphatase CLSA_c11340 PF00334 Nucleoside diphosphate kinase CLSA_c11350 PF07883 Cupin domain CLSA_c11350 PF12844 Helix-turn-helix domain CLSA_c11370 PF00905 Penicillin binding protein transpeptidase domain CLSA_c11370 PF00912 Transglycosylase CLSA_c11380 PF09560 CLSA_c11380 CLSA_c11390 PF00156 Phosphoribosyl transferase domain CLSA_c11400 PF01926 50S ribosome-binding GTPase CLSA_c11400 PF13167 CLSA_c11400 CLSA_c11400 PF16360 CLSA_c11400 CLSA_c11420 PF01909 Nucleotidyltransferase domain CLSA_c11430 PF00155 Aminotransferase class I and II CLSA_c11430 PF00392 Bacterial regulatory proteins, gntR family CLSA_c11440 PF01205 Uncharacterized protein family UPF0029 CLSA_c11440 PF09186 Domain of unknown function (DUF1949) CLSA_c11450 PF01709 Transcriptional regulator CLSA_c11460 PF00437 Type II/IV secretion system protein CLSA_c11470 PF01478 Type IV leader peptidase family CLSA_c11470 PF06750 CLSA_c11470 CLSA_c11480 PF00437 Type II/IV secretion system protein CLSA_c11480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLSA_c11490 PF00482 Type II secretion system (T2SS), protein F CLSA_c11500 PF07963 Prokaryotic N-terminal methylation motif CLSA_c11510 PF11104 Type IV pilus assembly protein PilM; CLSA_c11520 PF05137 CLSA_c11520 CLSA_c11540 PF07963 Prokaryotic N-terminal methylation motif CLSA_c11560 PF07963 Prokaryotic N-terminal methylation motif CLSA_c11570 PF13519 von Willebrand factor type A domain CLSA_c11580 PF00990 GGDEF domain CLSA_c11590 PF09335 CLSA_c11590 CLSA_c11600 PF00696 Amino acid kinase family CLSA_c11610 PF00120 Glutamine synthetase, catalytic domain CLSA_c11610 PF03951 Glutamine synthetase, beta-Grasp domain CLSA_c11620 PF03861 ANTAR domain CLSA_c11630 PF00310 Glutamine amidotransferases class-II CLSA_c11630 PF01493 GXGXG motif CLSA_c11630 PF01645 Conserved region in glutamate synthase CLSA_c11630 PF04898 Glutamate synthase central domain CLSA_c11640 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c11640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLSA_c11660 PF00180 Isocitrate/isopropylmalate dehydrogenase CLSA_c11680 PF02447 CLSA_c11680 CLSA_c11690 PF02595 Glycerate kinase family CLSA_c11700 PF05651 CLSA_c11700 CLSA_c11700 PF13556 PucR C-terminal helix-turn-helix domain CLSA_c11710 PF03063 Prismane/CO dehydrogenase family CLSA_c11720 PF03992 Antibiotic biosynthesis monooxygenase CLSA_c11740 PF02073 Thermophilic metalloprotease (M29) CLSA_c11750 PF00476 DNA polymerase family A CLSA_c11750 PF01367 5'-3' exonuclease, C-terminal SAM fold CLSA_c11750 PF01612 3'-5' exonuclease CLSA_c11750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLSA_c11760 PF01121 Dephospho-CoA kinase CLSA_c11770 PF01464 Transglycosylase SLT domain CLSA_c11790 PF01695 IstB-like ATP binding protein CLSA_c11810 PF01473 Putative cell wall binding repeat CLSA_c11840 PF05598 CLSA_c11840 CLSA_c11850 PF00239 Resolvase, N terminal domain CLSA_c11870 PF13391 CLSA_c11870 CLSA_c11890 PF00440 Bacterial regulatory proteins, tetR family CLSA_c11890 PF13972 Bacterial transcriptional repressor CLSA_c11900 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CLSA_c11900 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CLSA_c11910 PF12698 ABC-2 family transporter protein CLSA_c11920 PF12698 ABC-2 family transporter protein CLSA_c11930 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c11940 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c11940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c11950 PF03073 TspO/MBR family CLSA_c11960 PF01131 DNA topoisomerase CLSA_c11960 PF01751 Toprim domain CLSA_c11970 PF08241 Methyltransferase domain CLSA_c11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c11980 PF02743 Cache domain CLSA_c11990 PF00909 Ammonium Transporter Family CLSA_c12000 PF09084 NMT1/THI5 like CLSA_c12010 PF00005 ABC transporter CLSA_c12020 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c12030 PF03788 CLSA_c12030 CLSA_c12040 PF04172 CLSA_c12040 CLSA_c12050 PF02588 CLSA_c12050 CLSA_c12050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLSA_c12060 PF01613 Flavin reductase like domain CLSA_c12070 PF00768 D-alanyl-D-alanine carboxypeptidase CLSA_c12080 PF01522 Polysaccharide deacetylase CLSA_c12090 PF00455 CLSA_c12090 CLSA_c12090 PF08220 DeoR-like helix-turn-helix domain CLSA_c12100 PF00465 Iron-containing alcohol dehydrogenase CLSA_c12110 PF01116 Fructose-bisphosphate aldolase class-II CLSA_c12120 PF00294 pfkB family carbohydrate kinase CLSA_c12130 PF04962 KduI/IolB family CLSA_c12140 PF00205 Thiamine pyrophosphate enzyme, central domain CLSA_c12140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLSA_c12140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLSA_c12150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLSA_c12150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLSA_c12160 PF01261 Xylose isomerase-like TIM barrel CLSA_c12170 PF00083 Sugar (and other) transporter CLSA_c12180 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLSA_c12190 PF08245 Mur ligase middle domain CLSA_c12190 PF08353 CLSA_c12190 CLSA_c12200 PF05164 Cell division protein ZapA CLSA_c12210 PF01136 CLSA_c12210 CLSA_c12210 PF12392 CLSA_c12210 CLSA_c12220 PF00488 MutS domain V CLSA_c12220 PF01713 Smr domain CLSA_c12230 PF04463 CLSA_c12230 CLSA_c12250 PF00149 Calcineurin-like phosphoesterase CLSA_c12250 PF12320 Type 5 capsule protein repressor C-terminal domain CLSA_c12260 PF13476 AAA domain CLSA_c12260 PF13558 Putative exonuclease SbcCD, C subunit CLSA_c12270 PF01386 Ribosomal L25p family CLSA_c12270 PF14693 Ribosomal protein TL5, C-terminal domain CLSA_c12280 PF01386 Ribosomal L25p family CLSA_c12280 PF14693 Ribosomal protein TL5, C-terminal domain CLSA_c12290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLSA_c12290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLSA_c12290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLSA_c12290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLSA_c12300 PF00515 Tetratricopeptide repeat CLSA_c12300 PF13424 Tetratricopeptide repeat CLSA_c12310 PF03808 CLSA_c12310 CLSA_c12320 PF03023 CLSA_c12320 CLSA_c12340 PF00534 Glycosyl transferases group 1 CLSA_c12340 PF13439 Glycosyltransferase Family 4 CLSA_c12350 PF04932 CLSA_c12350 CLSA_c12360 PF04961 Formiminotransferase-cyclodeaminase CLSA_c12380 PF01522 Polysaccharide deacetylase CLSA_c12390 PF01926 50S ribosome-binding GTPase CLSA_c12390 PF06071 Protein of unknown function (DUF933) CLSA_c12400 PF13181 Tetratricopeptide repeat CLSA_c12410 PF01238 Phosphomannose isomerase type I CLSA_c12420 PF02673 CLSA_c12420 CLSA_c12430 PF00365 Phosphofructokinase CLSA_c12440 PF13354 Beta-lactamase enzyme family CLSA_c12450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLSA_c12450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLSA_c12460 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CLSA_c12460 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CLSA_c12470 PF01979 Amidohydrolase family CLSA_c12480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLSA_c12490 PF00175 Oxidoreductase NAD-binding domain CLSA_c12490 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLSA_c12500 PF01180 Dihydroorotate dehydrogenase CLSA_c12510 PF00156 Phosphoribosyl transferase domain CLSA_c12520 PF07833 Copper amine oxidase N-terminal domain CLSA_c12520 PF10096 CLSA_c12520 CLSA_c12530 PF01228 Glycine radical CLSA_c12530 PF02901 Pyruvate formate lyase CLSA_c12540 PF01228 Glycine radical CLSA_c12540 PF02901 Pyruvate formate lyase CLSA_c12550 PF04055 Radical SAM superfamily CLSA_c12550 PF13353 4Fe-4S single cluster domain CLSA_c12560 PF00301 Rubredoxin CLSA_c12570 PF00929 Exonuclease CLSA_c12580 PF00056 lactate/malate dehydrogenase, NAD binding domain CLSA_c12580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLSA_c12590 PF03099 Biotin/lipoate A/B protein ligase family CLSA_c12590 PF08279 HTH domain CLSA_c12600 PF09992 Predicted periplasmic protein (DUF2233) CLSA_c12620 PF02163 Peptidase family M50 CLSA_c12630 PF00750 tRNA synthetases class I (R) CLSA_c12630 PF03485 Arginyl tRNA synthetase N terminal domain CLSA_c12630 PF05746 DALR anticodon binding domain CLSA_c12640 PF01594 CLSA_c12640 CLSA_c12650 PF00881 Nitroreductase family CLSA_c12660 PF12710 haloacid dehalogenase-like hydrolase CLSA_c12670 PF13482 RNase_H superfamily CLSA_c12690 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLSA_c12700 PF00753 Metallo-beta-lactamase superfamily CLSA_c12710 PF01293 Phosphoenolpyruvate carboxykinase CLSA_c12720 PF06541 CLSA_c12720 CLSA_c12730 PF04070 CLSA_c12730 CLSA_c12740 PF01037 AsnC family CLSA_c12740 PF13412 Winged helix-turn-helix DNA-binding CLSA_c12770 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c12780 PF13509 S1 domain CLSA_c12790 PF00733 Asparagine synthase CLSA_c12790 PF13537 Glutamine amidotransferase domain CLSA_c12800 PF03885 Protein of unknown function (DUF327) CLSA_c12810 PF09084 NMT1/THI5 like CLSA_c12820 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c12830 PF00005 ABC transporter CLSA_c12850 PF00085 Thioredoxin CLSA_c12870 PF01063 Aminotransferase class IV CLSA_c12880 PF00795 Carbon-nitrogen hydrolase CLSA_c12880 PF02540 NAD synthase CLSA_c12890 PF01957 NfeD-like C-terminal, partner-binding CLSA_c12900 PF01145 SPFH domain / Band 7 family CLSA_c12920 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c12930 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c12940 PF00005 ABC transporter CLSA_c12950 PF13451 CLSA_c12950 CLSA_c12960 PF02769 AIR synthase related protein, C-terminal domain CLSA_c12960 PF13507 CobB/CobQ-like glutamine amidotransferase domain CLSA_c12970 PF00731 AIR carboxylase CLSA_c12980 PF01259 SAICAR synthetase CLSA_c12990 PF00156 Phosphoribosyl transferase domain CLSA_c12990 PF13522 Glutamine amidotransferase domain CLSA_c13000 PF00586 AIR synthase related protein, N-terminal domain CLSA_c13000 PF02769 AIR synthase related protein, C-terminal domain CLSA_c13010 PF00551 Formyl transferase CLSA_c13020 PF01808 AICARFT/IMPCHase bienzyme CLSA_c13020 PF02142 MGS-like domain CLSA_c13030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLSA_c13030 PF02843 Phosphoribosylglycinamide synthetase, C domain CLSA_c13030 PF02844 Phosphoribosylglycinamide synthetase, N domain CLSA_c13040 PF00515 Tetratricopeptide repeat CLSA_c13040 PF13181 Tetratricopeptide repeat CLSA_c13040 PF13431 Tetratricopeptide repeat CLSA_c13050 PF12158 CLSA_c13050 CLSA_c13070 PF13463 Winged helix DNA-binding domain CLSA_c13080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLSA_c13080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLSA_c13090 PF00550 Phosphopantetheine attachment site CLSA_c13100 PF03060 Nitronate monooxygenase CLSA_c13110 PF00698 Acyl transferase domain CLSA_c13120 PF13561 Enoyl-(Acyl carrier protein) reductase CLSA_c13130 PF00109 Beta-ketoacyl synthase, N-terminal domain CLSA_c13130 PF02801 Beta-ketoacyl synthase, C-terminal domain CLSA_c13140 PF00364 Biotin-requiring enzyme CLSA_c13150 PF07977 FabA-like domain CLSA_c13160 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CLSA_c13160 PF02785 Biotin carboxylase C-terminal domain CLSA_c13160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLSA_c13170 PF01039 Carboxyl transferase domain CLSA_c13180 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLSA_c13190 PF09021 HutP CLSA_c13200 PF05496 Holliday junction DNA helicase ruvB N-terminus CLSA_c13200 PF12002 MgsA AAA+ ATPase C terminal CLSA_c13200 PF16193 CLSA_c13200 CLSA_c13210 PF02082 Transcriptional regulator CLSA_c13220 PF00266 Aminotransferase class-V CLSA_c13230 PF01592 NifU-like N terminal domain CLSA_c13240 PF03054 tRNA methyl transferase CLSA_c13250 PF05239 PRC-barrel domain CLSA_c13260 PF01594 CLSA_c13260 CLSA_c13270 PF01411 tRNA synthetases class II (A) CLSA_c13270 PF02272 DHHA1 domain CLSA_c13270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLSA_c13280 PF06135 CLSA_c13280 CLSA_c13290 PF03652 Uncharacterised protein family (UPF0081) CLSA_c13300 PF06949 CLSA_c13300 CLSA_c13310 PF01475 Ferric uptake regulator family CLSA_c13320 PF00753 Metallo-beta-lactamase superfamily CLSA_c13320 PF07521 RNA-metabolising metallo-beta-lactamase CLSA_c13330 PF00009 Elongation factor Tu GTP binding domain CLSA_c13330 PF00679 Elongation factor G C-terminus CLSA_c13330 PF03144 Elongation factor Tu domain 2 CLSA_c13340 PF02618 YceG-like family CLSA_c13350 PF01596 O-methyltransferase CLSA_c13360 PF01136 CLSA_c13360 CLSA_c13360 PF16325 CLSA_c13360 CLSA_c13370 PF00905 Penicillin binding protein transpeptidase domain CLSA_c13380 PF04542 Sigma-70 region 2 CLSA_c13380 PF04545 Sigma-70, region 4 CLSA_c13390 PF02491 SHS2 domain inserted in FTSA CLSA_c13390 PF14450 Cell division protein FtsA CLSA_c13400 PF00091 Tubulin/FtsZ family, GTPase domain CLSA_c13400 PF12327 FtsZ family, C-terminal domain CLSA_c13410 PF03419 CLSA_c13410 CLSA_c13420 PF04542 Sigma-70 region 2 CLSA_c13420 PF04545 Sigma-70, region 4 CLSA_c13430 PF04542 Sigma-70 region 2 CLSA_c13430 PF04545 Sigma-70, region 4 CLSA_c13440 PF05239 PRC-barrel domain CLSA_c13450 PF03477 ATP cone domain CLSA_c13460 PF02578 Multi-copper polyphenol oxidoreductase laccase CLSA_c13470 PF00072 Response regulator receiver domain CLSA_c13470 PF00486 Transcriptional regulatory protein, C terminal CLSA_c13480 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c13480 PF00672 HAMP domain CLSA_c13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c13480 PF13188 PAS domain CLSA_c13480 PF16736 CLSA_c13480 CLSA_c13490 PF12849 PBP superfamily domain CLSA_c13500 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c13510 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c13520 PF00005 ABC transporter CLSA_c13530 PF01895 PhoU domain CLSA_c13540 PF04459 CLSA_c13540 CLSA_c13550 PF01926 50S ribosome-binding GTPase CLSA_c13550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLSA_c13560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLSA_c13560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLSA_c13570 PF09547 CLSA_c13570 CLSA_c13590 PF00860 Permease family CLSA_c13600 PF03755 CLSA_c13600 CLSA_c13600 PF08340 CLSA_c13600 CLSA_c13610 PF04025 CLSA_c13610 CLSA_c13620 PF00625 Guanylate kinase CLSA_c13630 PF01192 RNA polymerase Rpb6 CLSA_c13640 PF02441 Flavoprotein CLSA_c13640 PF04127 DNA / pantothenate metabolism flavoprotein CLSA_c13650 PF00270 DEAD/DEAH box helicase CLSA_c13650 PF00271 Helicase conserved C-terminal domain CLSA_c13660 PF01327 Polypeptide deformylase CLSA_c13670 PF00551 Formyl transferase CLSA_c13670 PF02911 Formyl transferase, C-terminal domain CLSA_c13680 PF04298 CLSA_c13680 CLSA_c13690 PF01029 NusB family CLSA_c13690 PF01189 NOL1/NOP2/sun family CLSA_c13690 PF17125 CLSA_c13690 CLSA_c13700 PF04055 Radical SAM superfamily CLSA_c13700 PF13394 4Fe-4S single cluster domain CLSA_c13710 PF13672 Protein phosphatase 2C CLSA_c13720 PF00069 Protein kinase domain CLSA_c13720 PF03793 PASTA domain CLSA_c13730 PF03193 Protein of unknown function, DUF258 CLSA_c13730 PF16745 CLSA_c13730 CLSA_c13740 PF00834 Ribulose-phosphate 3 epimerase family CLSA_c13750 PF04263 Thiamin pyrophosphokinase, catalytic domain CLSA_c13750 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CLSA_c13760 PF00830 Ribosomal L28 family CLSA_c13770 PF03780 CLSA_c13770 CLSA_c13780 PF02734 DAK2 domain CLSA_c13780 PF13684 Dihydroxyacetone kinase family CLSA_c13790 PF00270 DEAD/DEAH box helicase CLSA_c13790 PF00271 Helicase conserved C-terminal domain CLSA_c13790 PF17191 CLSA_c13790 CLSA_c13800 PF03602 Conserved hypothetical protein 95 CLSA_c13810 PF01467 Cytidylyltransferase CLSA_c13840 PF05636 HIGH Nucleotidyl Transferase CLSA_c13850 PF01515 Phosphate acetyl/butaryl transferase CLSA_c13860 PF00871 Acetokinase family CLSA_c13870 PF02620 CLSA_c13870 CLSA_c13880 PF01783 Ribosomal L32p protein family CLSA_c13890 PF02504 Fatty acid synthesis protein CLSA_c13900 PF00550 Phosphopantetheine attachment site CLSA_c13910 PF00035 Double-stranded RNA binding motif CLSA_c13910 PF14622 Ribonuclease-III-like CLSA_c13920 PF04055 Radical SAM superfamily CLSA_c13920 PF13394 4Fe-4S single cluster domain CLSA_c13920 PF16199 CLSA_c13920 CLSA_c13930 PF02463 RecF/RecN/SMC N terminal domain CLSA_c13930 PF06470 SMC proteins Flexible Hinge Domain CLSA_c13940 PF00448 SRP54-type protein, GTPase domain CLSA_c13940 PF02881 SRP54-type protein, helical bundle domain CLSA_c13950 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CLSA_c13960 PF00448 SRP54-type protein, GTPase domain CLSA_c13960 PF02881 SRP54-type protein, helical bundle domain CLSA_c13960 PF02978 Signal peptide binding domain CLSA_c13970 PF00886 Ribosomal protein S16 CLSA_c13980 PF13083 KH domain CLSA_c13990 PF01782 RimM N-terminal domain CLSA_c13990 PF05239 PRC-barrel domain CLSA_c14000 PF01746 tRNA (Guanine-1)-methyltransferase CLSA_c14010 PF01245 Ribosomal protein L19 CLSA_c14020 PF01926 50S ribosome-binding GTPase CLSA_c14030 PF01351 Ribonuclease HII CLSA_c14040 PF00872 CLSA_c14040 CLSA_c14050 PF02021 Uncharacterised protein family UPF0102 CLSA_c14060 PF01078 Magnesium chelatase, subunit ChlI CLSA_c14060 PF13335 CLSA_c14060 CLSA_c14060 PF13541 Subunit ChlI of Mg-chelatase CLSA_c14070 PF02481 DNA recombination-mediator protein A CLSA_c14080 PF01131 DNA topoisomerase CLSA_c14080 PF01396 CLSA_c14080 CLSA_c14080 PF01751 Toprim domain CLSA_c14090 PF06018 CodY GAF-like domain CLSA_c14090 PF08222 CodY helix-turn-helix domain CLSA_c14100 PF00318 Ribosomal protein S2 CLSA_c14110 PF00889 Elongation factor TS CLSA_c14120 PF00696 Amino acid kinase family CLSA_c14130 PF01765 Ribosome recycling factor CLSA_c14140 PF01255 Putative undecaprenyl diphosphate synthase CLSA_c14150 PF01148 Cytidylyltransferase family CLSA_c14160 PF01594 CLSA_c14160 CLSA_c14170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLSA_c14170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CLSA_c14170 PF13288 DXP reductoisomerase C-terminal domain CLSA_c14290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLSA_c14350 PF02163 Peptidase family M50 CLSA_c14360 PF04551 GcpE protein CLSA_c14370 PF02576 Uncharacterised BCR, YhbC family COG0779 CLSA_c14370 PF17384 CLSA_c14370 CLSA_c14380 PF00575 S1 RNA binding domain CLSA_c14380 PF08529 NusA N-terminal domain CLSA_c14380 PF13184 NusA-like KH domain CLSA_c14390 PF04296 Protein of unknown function (DUF448) CLSA_c14400 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLSA_c14410 PF00009 Elongation factor Tu GTP binding domain CLSA_c14410 PF04760 Translation initiation factor IF-2, N-terminal region CLSA_c14410 PF11987 Translation-initiation factor 2 CLSA_c14420 PF02033 Ribosome-binding factor A CLSA_c14430 PF01368 DHH family CLSA_c14430 PF02272 DHHA1 domain CLSA_c14440 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLSA_c14440 PF16198 CLSA_c14440 CLSA_c14450 PF01687 Riboflavin kinase CLSA_c14450 PF06574 FAD synthetase CLSA_c14460 PF00312 Ribosomal protein S15 CLSA_c14470 PF00013 KH domain CLSA_c14470 PF00575 S1 RNA binding domain CLSA_c14470 PF01138 3' exoribonuclease family, domain 1 CLSA_c14470 PF03725 3' exoribonuclease family, domain 2 CLSA_c14470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLSA_c14480 PF00675 Insulinase (Peptidase family M16) CLSA_c14480 PF05193 Peptidase M16 inactive domain CLSA_c14490 PF05239 PRC-barrel domain CLSA_c14500 PF00696 Amino acid kinase family CLSA_c14500 PF13840 ACT domain CLSA_c14510 PF00574 Clp protease CLSA_c14520 PF01580 FtsK/SpoIIIE family CLSA_c14520 PF09397 Ftsk gamma domain CLSA_c14530 PF00919 Uncharacterized protein family UPF0004 CLSA_c14530 PF04055 Radical SAM superfamily CLSA_c14540 PF01066 CDP-alcohol phosphatidyltransferase CLSA_c14550 PF00154 recA bacterial DNA recombination protein CLSA_c14560 PF00013 KH domain CLSA_c14560 PF01966 HD domain CLSA_c14560 PF12072 CLSA_c14560 CLSA_c14570 PF04232 Stage V sporulation protein S (SpoVS) CLSA_c14580 PF00381 PTS HPr component phosphorylation site CLSA_c14590 PF00206 Lyase CLSA_c14590 PF10397 Adenylosuccinate lyase C-terminus CLSA_c14600 PF12671 CLSA_c14600 CLSA_c14610 PF04184 CLSA_c14610 CLSA_c14620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLSA_c14620 PF01872 RibD C-terminal domain CLSA_c14630 PF00677 Lumazine binding domain CLSA_c14640 PF00925 GTP cyclohydrolase II CLSA_c14640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLSA_c14650 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLSA_c14670 PF00392 Bacterial regulatory proteins, gntR family CLSA_c14670 PF02080 TrkA-C domain CLSA_c14680 PF00005 ABC transporter CLSA_c14680 PF00571 CBS domain CLSA_c14690 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c14690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLSA_c14700 PF07561 CLSA_c14700 CLSA_c14710 PF02915 Rubrerythrin CLSA_c14720 PF00881 Nitroreductase family CLSA_c14730 PF13419 Haloacid dehalogenase-like hydrolase CLSA_c14740 PF01473 Putative cell wall binding repeat CLSA_c14740 PF01841 Transglutaminase-like superfamily CLSA_c14750 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLSA_c14750 PF04262 Glutamate-cysteine ligase CLSA_c14750 PF08443 RimK-like ATP-grasp domain CLSA_c14760 PF08238 Sel1 repeat CLSA_c14770 PF01270 Glycosyl hydrolases family 8 CLSA_c14790 PF01473 Putative cell wall binding repeat CLSA_c14810 PF13685 Iron-containing alcohol dehydrogenase CLSA_c14820 PF00872 CLSA_c14820 CLSA_c14830 PF03063 Prismane/CO dehydrogenase family CLSA_c14840 PF02082 Transcriptional regulator CLSA_c14860 PF00929 Exonuclease CLSA_c14870 PF03551 Transcriptional regulator PadR-like family CLSA_c14890 PF03734 L,D-transpeptidase catalytic domain CLSA_c14890 PF12229 Putative peptidoglycan binding domain CLSA_c14900 PF03734 L,D-transpeptidase catalytic domain CLSA_c14900 PF12229 Putative peptidoglycan binding domain CLSA_c14910 PF01261 Xylose isomerase-like TIM barrel CLSA_c14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c14930 PF03466 LysR substrate binding domain CLSA_c14940 PF01487 Type I 3-dehydroquinase CLSA_c14950 PF00072 Response regulator receiver domain CLSA_c14950 PF01584 CheW-like domain CLSA_c14960 PF01966 HD domain CLSA_c14970 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLSA_c14970 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLSA_c14970 PF09989 CLSA_c14970 CLSA_c14980 PF02645 Uncharacterised protein, DegV family COG1307 CLSA_c14990 PF00722 Glycosyl hydrolases family 16 CLSA_c15010 PF01206 Sulfurtransferase TusA CLSA_c15010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLSA_c15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c15010 PF13686 DsrE/DsrF/DrsH-like family CLSA_c15020 PF04456 Protein of unknown function (DUF503) CLSA_c15030 PF01638 HxlR-like helix-turn-helix CLSA_c15040 PF09284 Rhamnogalacturonase B, N-terminal CLSA_c15040 PF14683 Polysaccharide lyase family 4, domain III CLSA_c15040 PF14686 Polysaccharide lyase family 4, domain II CLSA_c15050 PF00579 tRNA synthetases class I (W and Y) CLSA_c15060 PF00232 Glycosyl hydrolase family 1 CLSA_c15070 PF01594 CLSA_c15070 CLSA_c15080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLSA_c15090 PF06445 GyrI-like small molecule binding domain CLSA_c15100 PF01965 DJ-1/PfpI family CLSA_c15110 PF08279 HTH domain CLSA_c15110 PF13280 CLSA_c15110 CLSA_c15120 PF08241 Methyltransferase domain CLSA_c15120 PF13411 MerR HTH family regulatory protein CLSA_c15130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLSA_c15140 PF03551 Transcriptional regulator PadR-like family CLSA_c15140 PF10400 Virulence activator alpha C-term CLSA_c15150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLSA_c15150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c15160 PF03372 Endonuclease/Exonuclease/phosphatase family CLSA_c15170 PF08239 Bacterial SH3 domain CLSA_c15180 PF06725 3D domain CLSA_c15190 PF00881 Nitroreductase family CLSA_c15200 PF01136 CLSA_c15200 CLSA_c15200 PF16325 CLSA_c15200 CLSA_c15210 PF00171 Aldehyde dehydrogenase family CLSA_c15220 PF00403 Heavy-metal-associated domain CLSA_c15230 PF01814 Hemerythrin HHE cation binding domain CLSA_c15240 PF01432 Peptidase family M3 CLSA_c15240 PF08439 Oligopeptidase F CLSA_c15250 PF01569 PAP2 superfamily CLSA_c15280 PF00206 Lyase CLSA_c15280 PF10415 Fumarase C C-terminus CLSA_c15290 PF01037 AsnC family CLSA_c15290 PF13412 Winged helix-turn-helix DNA-binding CLSA_c15300 PF13649 Methyltransferase domain CLSA_c15330 PF01522 Polysaccharide deacetylase CLSA_c15350 PF13740 ACT domain CLSA_c15360 PF05167 Uncharacterised ACR (DUF711) CLSA_c15370 PF13786 Domain of unknown function (DUF4179) CLSA_c15380 PF04542 Sigma-70 region 2 CLSA_c15380 PF08281 Sigma-70, region 4 CLSA_c15390 PF04055 Radical SAM superfamily CLSA_c15390 PF08497 CLSA_c15390 CLSA_c15390 PF11842 CLSA_c15390 CLSA_c15410 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c15420 PF03372 Endonuclease/Exonuclease/phosphatase family CLSA_c15440 PF00857 Isochorismatase family CLSA_c15470 PF00753 Metallo-beta-lactamase superfamily CLSA_c15490 PF12788 CLSA_c15490 CLSA_c15500 PF01609 Transposase DDE domain CLSA_c15510 PF00009 Elongation factor Tu GTP binding domain CLSA_c15510 PF00679 Elongation factor G C-terminus CLSA_c15510 PF03764 Elongation factor G, domain IV CLSA_c15530 PF00230 Major intrinsic protein CLSA_c15550 PF02734 DAK2 domain CLSA_c15560 PF03610 PTS system fructose IIA component CLSA_c15570 PF01863 Protein of unknown function DUF45 CLSA_c15580 PF06691 CLSA_c15580 CLSA_c15590 PF01242 6-pyruvoyl tetrahydropterin synthase CLSA_c15600 PF04055 Radical SAM superfamily CLSA_c15600 PF13394 4Fe-4S single cluster domain CLSA_c15610 PF01227 GTP cyclohydrolase I CLSA_c15620 PF06508 Queuosine biosynthesis protein QueC CLSA_c15630 PF14489 QueF-like protein CLSA_c15640 PF01473 Putative cell wall binding repeat CLSA_c15670 PF01473 Putative cell wall binding repeat CLSA_c15680 PF00717 Peptidase S24-like CLSA_c15680 PF01726 LexA DNA binding domain CLSA_c15700 PF00892 EamA-like transporter family CLSA_c15710 PF00258 Flavodoxin CLSA_c15720 PF12672 CLSA_c15720 CLSA_c15730 PF00293 NUDIX domain CLSA_c15740 PF05067 Manganese containing catalase CLSA_c15750 PF12652 CLSA_c15750 CLSA_c15760 PF11007 CLSA_c15760 CLSA_c15770 PF00293 NUDIX domain CLSA_c15780 PF14572 Phosphoribosyl synthetase-associated domain CLSA_c15790 PF00857 Isochorismatase family CLSA_c15800 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLSA_c15810 PF00583 Acetyltransferase (GNAT) family CLSA_c15820 PF02811 PHP domain CLSA_c15830 PF02698 DUF218 domain CLSA_c15840 PF01966 HD domain CLSA_c15850 PF00571 CBS domain CLSA_c15870 PF00294 pfkB family carbohydrate kinase CLSA_c15880 PF05025 RbsD / FucU transport protein family CLSA_c15890 PF00005 ABC transporter CLSA_c15900 PF02653 CLSA_c15900 CLSA_c15910 PF13407 Periplasmic binding protein domain CLSA_c15920 PF00356 Bacterial regulatory proteins, lacI family CLSA_c15920 PF13377 Periplasmic binding protein-like domain CLSA_c15930 PF12788 CLSA_c15930 CLSA_c15940 PF00069 Protein kinase domain CLSA_c16000 PF12833 Helix-turn-helix domain CLSA_c16010 PF00561 alpha/beta hydrolase fold CLSA_c16030 PF13451 CLSA_c16030 CLSA_c16050 PF01327 Polypeptide deformylase CLSA_c16060 PF00583 Acetyltransferase (GNAT) family CLSA_c16110 PF00155 Aminotransferase class I and II CLSA_c16120 PF13451 CLSA_c16120 CLSA_c16130 PF00158 Sigma-54 interaction domain CLSA_c16130 PF01590 GAF domain CLSA_c16130 PF02954 Bacterial regulatory protein, Fis family CLSA_c16140 PF00465 Iron-containing alcohol dehydrogenase CLSA_c16150 PF00175 Oxidoreductase NAD-binding domain CLSA_c16150 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLSA_c16160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c16160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLSA_c16170 PF02632 BioY family CLSA_c16180 PF13500 AAA domain CLSA_c16190 PF00202 Aminotransferase class-III CLSA_c16210 PF07885 Ion channel CLSA_c16220 PF01473 Putative cell wall binding repeat CLSA_c16270 PF12146 Putative lysophospholipase CLSA_c16280 PF00583 Acetyltransferase (GNAT) family CLSA_c16310 PF00398 Ribosomal RNA adenine dimethylase CLSA_c16320 PF01569 PAP2 superfamily CLSA_c16330 PF00072 Response regulator receiver domain CLSA_c16330 PF00486 Transcriptional regulatory protein, C terminal CLSA_c16340 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c16340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c16350 PF09335 CLSA_c16350 CLSA_c16360 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c16370 PF00440 Bacterial regulatory proteins, tetR family CLSA_c16380 PF13437 HlyD family secretion protein CLSA_c16380 PF13533 Biotin-lipoyl like CLSA_c16390 PF00873 AcrB/AcrD/AcrF family CLSA_c16400 PF04055 Radical SAM superfamily CLSA_c16400 PF13353 4Fe-4S single cluster domain CLSA_c16410 PF01228 Glycine radical CLSA_c16410 PF02901 Pyruvate formate lyase CLSA_c16440 PF13545 Crp-like helix-turn-helix domain CLSA_c16450 PF12641 CLSA_c16450 CLSA_c16460 PF12706 Beta-lactamase superfamily domain CLSA_c16470 PF04343 CLSA_c16470 CLSA_c16490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c16510 PF13419 Haloacid dehalogenase-like hydrolase CLSA_c16520 PF13411 MerR HTH family regulatory protein CLSA_c16530 PF03358 NADPH-dependent FMN reductase CLSA_c16540 PF06445 GyrI-like small molecule binding domain CLSA_c16560 PF07519 Tannase and feruloyl esterase CLSA_c16630 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c16650 PF02687 CLSA_c16650 CLSA_c16670 PF11148 CLSA_c16670 CLSA_c16680 PF07872 CLSA_c16680 CLSA_c16690 PF13407 Periplasmic binding protein domain CLSA_c16700 PF13407 Periplasmic binding protein domain CLSA_c16710 PF01022 Bacterial regulatory protein, arsR family CLSA_c16720 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLSA_c16730 PF02374 Anion-transporting ATPase CLSA_c16740 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLSA_c16750 PF01758 Sodium Bile acid symporter family CLSA_c16760 PF00583 Acetyltransferase (GNAT) family CLSA_c16780 PF01047 MarR family CLSA_c16790 PF06965 Na+/H+ antiporter 1 CLSA_c16800 PF00916 CLSA_c16800 CLSA_c16800 PF01740 STAS domain CLSA_c16820 PF13187 4Fe-4S dicluster domain CLSA_c16830 PF00583 Acetyltransferase (GNAT) family CLSA_c16840 PF01966 HD domain CLSA_c16860 PF00163 Ribosomal protein S4/S9 N-terminal domain CLSA_c16860 PF01479 S4 domain CLSA_c16870 PF12833 Helix-turn-helix domain CLSA_c16880 PF00425 chorismate binding enzyme CLSA_c16890 PF14501 GHKL domain CLSA_c16900 PF00975 Thioesterase domain CLSA_c16910 PF01648 4'-phosphopantetheinyl transferase superfamily CLSA_c16920 PF00501 AMP-binding enzyme CLSA_c16920 PF13193 AMP-binding enzyme C-terminal domain CLSA_c16930 PF00501 AMP-binding enzyme CLSA_c16930 PF00550 Phosphopantetheine attachment site CLSA_c16930 PF00668 Condensation domain CLSA_c16930 PF08242 Methyltransferase domain CLSA_c16940 PF00501 AMP-binding enzyme CLSA_c16940 PF00550 Phosphopantetheine attachment site CLSA_c16940 PF00668 Condensation domain CLSA_c16940 PF00975 Thioesterase domain CLSA_c16940 PF08242 Methyltransferase domain CLSA_c16950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLSA_c16960 PF00550 Phosphopantetheine attachment site CLSA_c16960 PF07993 Male sterility protein CLSA_c16970 PF12833 Helix-turn-helix domain CLSA_c16980 PF09605 CLSA_c16980 CLSA_c16990 PF02361 Cobalt transport protein CLSA_c17000 PF00005 ABC transporter CLSA_c17010 PF00005 ABC transporter CLSA_c17010 PF00664 ABC transporter transmembrane region CLSA_c17020 PF00005 ABC transporter CLSA_c17020 PF00664 ABC transporter transmembrane region CLSA_c17030 PF01475 Ferric uptake regulator family CLSA_c17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c17050 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLSA_c17050 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLSA_c17070 PF10087 CLSA_c17070 CLSA_c17080 PF01566 CLSA_c17080 CLSA_c17100 PF02558 Ketopantoate reductase PanE/ApbA CLSA_c17110 PF12833 Helix-turn-helix domain CLSA_c17120 PF00005 ABC transporter CLSA_c17120 PF00664 ABC transporter transmembrane region CLSA_c17130 PF00005 ABC transporter CLSA_c17130 PF00664 ABC transporter transmembrane region CLSA_c17140 PF07731 Multicopper oxidase CLSA_c17140 PF07732 Multicopper oxidase CLSA_c17150 PF02001 CLSA_c17150 CLSA_c17160 PF02579 Dinitrogenase iron-molybdenum cofactor CLSA_c17200 PF02915 Rubrerythrin CLSA_c17210 PF12841 CLSA_c17210 CLSA_c17250 PF00583 Acetyltransferase (GNAT) family CLSA_c17270 PF13710 ACT domain CLSA_c17280 PF00205 Thiamine pyrophosphate enzyme, central domain CLSA_c17280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLSA_c17280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLSA_c17300 PF12788 CLSA_c17300 CLSA_c17310 PF02559 CarD-like/TRCF domain CLSA_c17320 PF02016 LD-carboxypeptidase CLSA_c17330 PF00877 NlpC/P60 family CLSA_c17350 PF02659 CLSA_c17350 CLSA_c17360 PF00682 HMGL-like CLSA_c17360 PF08502 LeuA allosteric (dimerisation) domain CLSA_c17370 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c17370 PF08447 PAS fold CLSA_c17380 PF00722 Glycosyl hydrolases family 16 CLSA_c17390 PF00155 Aminotransferase class I and II CLSA_c17400 PF01473 Putative cell wall binding repeat CLSA_c17410 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLSA_c17420 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLSA_c17430 PF03773 CLSA_c17430 CLSA_c17460 PF13561 Enoyl-(Acyl carrier protein) reductase CLSA_c17470 PF01047 MarR family CLSA_c17480 PF04909 Amidohydrolase CLSA_c17490 PF13472 GDSL-like Lipase/Acylhydrolase family CLSA_c17520 PF00892 EamA-like transporter family CLSA_c17530 PF08282 haloacid dehalogenase-like hydrolase CLSA_c17560 PF01891 Cobalt uptake substrate-specific transmembrane region CLSA_c17560 PF13190 CLSA_c17560 CLSA_c17570 PF02361 Cobalt transport protein CLSA_c17580 PF00005 ABC transporter CLSA_c17590 PF01969 Protein of unknown function DUF111 CLSA_c17600 PF02540 NAD synthase CLSA_c17610 PF00731 AIR carboxylase CLSA_c17620 PF00270 DEAD/DEAH box helicase CLSA_c17620 PF00271 Helicase conserved C-terminal domain CLSA_c17630 PF00270 DEAD/DEAH box helicase CLSA_c17630 PF00271 Helicase conserved C-terminal domain CLSA_c17630 PF03880 DbpA RNA binding domain CLSA_c17640 PF00557 Metallopeptidase family M24 CLSA_c17640 PF02810 SEC-C motif CLSA_c17650 PF00270 DEAD/DEAH box helicase CLSA_c17650 PF00271 Helicase conserved C-terminal domain CLSA_c17650 PF00570 HRDC domain CLSA_c17650 PF09382 RQC domain CLSA_c17650 PF14493 CLSA_c17650 CLSA_c17650 PF16124 CLSA_c17650 CLSA_c17670 PF00226 DnaJ domain CLSA_c17680 PF00176 SNF2 family N-terminal domain CLSA_c17680 PF00271 Helicase conserved C-terminal domain CLSA_c17680 PF08455 CLSA_c17680 CLSA_c17690 PF04542 Sigma-70 region 2 CLSA_c17700 PF12791 CLSA_c17700 CLSA_c17710 PF02219 Methylenetetrahydrofolate reductase CLSA_c17710 PF02574 Homocysteine S-methyltransferase CLSA_c17720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c17720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLSA_c17730 PF13520 Amino acid permease CLSA_c17740 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c17750 PF01022 Bacterial regulatory protein, arsR family CLSA_c17760 PF00122 E1-E2 ATPase CLSA_c17760 PF00403 Heavy-metal-associated domain CLSA_c17760 PF00702 haloacid dehalogenase-like hydrolase CLSA_c17770 PF03551 Transcriptional regulator PadR-like family CLSA_c17770 PF10400 Virulence activator alpha C-term CLSA_c17780 PF07690 Major Facilitator Superfamily CLSA_c17800 PF00561 alpha/beta hydrolase fold CLSA_c17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c17810 PF03466 LysR substrate binding domain CLSA_c17820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLSA_c17820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLSA_c17830 PF00155 Aminotransferase class I and II CLSA_c17840 PF03812 CLSA_c17840 CLSA_c17850 PF00874 PRD domain CLSA_c17850 PF03123 CAT RNA binding domain CLSA_c17860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLSA_c17860 PF00367 phosphotransferase system, EIIB CLSA_c17860 PF02378 Phosphotransferase system, EIIC CLSA_c17870 PF03547 CLSA_c17870 CLSA_c17880 PF00392 Bacterial regulatory proteins, gntR family CLSA_c17880 PF07729 FCD domain CLSA_c17890 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLSA_c17890 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLSA_c17900 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLSA_c17910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c17910 PF00672 HAMP domain CLSA_c17910 PF17203 CLSA_c17910 CLSA_c17920 PF00480 ROK family CLSA_c17930 PF01790 CLSA_c17930 CLSA_c17940 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c17960 PF13411 MerR HTH family regulatory protein CLSA_c17970 PF02779 Transketolase, pyrimidine binding domain CLSA_c17970 PF02780 Transketolase, C-terminal domain CLSA_c17970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLSA_c18000 PF13472 GDSL-like Lipase/Acylhydrolase family CLSA_c18020 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CLSA_c18030 PF13679 CLSA_c18030 CLSA_c18040 PF00158 Sigma-54 interaction domain CLSA_c18040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLSA_c18040 PF00874 PRD domain CLSA_c18040 PF03610 PTS system fructose IIA component CLSA_c18050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLSA_c18060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c18070 PF03611 CLSA_c18070 CLSA_c18080 PF13685 Iron-containing alcohol dehydrogenase CLSA_c18090 PF13242 HAD-hyrolase-like CLSA_c18090 PF13344 Haloacid dehalogenase-like hydrolase CLSA_c18100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLSA_c18100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLSA_c18110 PF07690 Major Facilitator Superfamily CLSA_c18120 PF06161 CLSA_c18120 CLSA_c18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c18140 PF13407 Periplasmic binding protein domain CLSA_c18150 PF13520 Amino acid permease CLSA_c18170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c18170 PF12729 CLSA_c18170 CLSA_c18180 PF00881 Nitroreductase family CLSA_c18190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c18190 PF12729 CLSA_c18190 CLSA_c18200 PF01243 Pyridoxamine 5'-phosphate oxidase CLSA_c18210 PF12833 Helix-turn-helix domain CLSA_c18240 PF00668 Condensation domain CLSA_c18250 PF00005 ABC transporter CLSA_c18250 PF00664 ABC transporter transmembrane region CLSA_c18260 PF00005 ABC transporter CLSA_c18260 PF00664 ABC transporter transmembrane region CLSA_c18270 PF01648 4'-phosphopantetheinyl transferase superfamily CLSA_c18300 PF01206 Sulfurtransferase TusA CLSA_c18300 PF02635 DsrE/DsrF-like family CLSA_c18310 PF00586 AIR synthase related protein, N-terminal domain CLSA_c18310 PF02769 AIR synthase related protein, C-terminal domain CLSA_c18320 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLSA_c18330 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLSA_c18340 PF12804 MobA-like NTP transferase domain CLSA_c18350 PF00941 FAD binding domain in molybdopterin dehydrogenase CLSA_c18350 PF03450 CO dehydrogenase flavoprotein C-terminal domain CLSA_c18360 PF00111 2Fe-2S iron-sulfur cluster binding domain CLSA_c18360 PF01799 [2Fe-2S] binding domain CLSA_c18370 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLSA_c18370 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLSA_c18380 PF02625 XdhC and CoxI family CLSA_c18380 PF13478 XdhC Rossmann domain CLSA_c18400 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c18410 PF00753 Metallo-beta-lactamase superfamily CLSA_c18420 PF02517 CAAX protease self-immunity CLSA_c18430 PF00561 alpha/beta hydrolase fold CLSA_c18450 PF00860 Permease family CLSA_c18480 PF00753 Metallo-beta-lactamase superfamily CLSA_c18490 PF14200 Ricin-type beta-trefoil lectin domain-like CLSA_c18500 PF01609 Transposase DDE domain CLSA_c18500 PF05598 CLSA_c18500 CLSA_c18510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLSA_c18520 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c18520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c18520 PF10114 CLSA_c18520 CLSA_c18530 PF00301 Rubredoxin CLSA_c18530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLSA_c18530 PF00766 Electron transfer flavoprotein FAD-binding domain CLSA_c18530 PF02770 Acyl-CoA dehydrogenase, middle domain CLSA_c18530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLSA_c18540 PF00258 Flavodoxin CLSA_c18540 PF00753 Metallo-beta-lactamase superfamily CLSA_c18550 PF03960 ArsC family CLSA_c18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c18570 PF03466 LysR substrate binding domain CLSA_c18580 PF00293 NUDIX domain CLSA_c18590 PF12698 ABC-2 family transporter protein CLSA_c18600 PF00206 Lyase CLSA_c18600 PF10415 Fumarase C C-terminus CLSA_c18610 PF01926 50S ribosome-binding GTPase CLSA_c18710 PF07690 Major Facilitator Superfamily CLSA_c18720 PF00324 Amino acid permease CLSA_c18730 PF03812 CLSA_c18730 CLSA_c18740 PF03551 Transcriptional regulator PadR-like family CLSA_c18740 PF10400 Virulence activator alpha C-term CLSA_c18750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLSA_c18750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLSA_c18760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c18760 PF02743 Cache domain CLSA_c18770 PF02311 AraC-like ligand binding domain CLSA_c18770 PF12833 Helix-turn-helix domain CLSA_c18780 PF00933 Glycosyl hydrolase family 3 N terminal domain CLSA_c18780 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLSA_c18780 PF14310 Fibronectin type III-like domain CLSA_c18790 PF13347 MFS/sugar transport protein CLSA_c18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c18800 PF05227 CHASE3 domain CLSA_c18810 PF04445 Putative SAM-dependent methyltransferase CLSA_c18820 PF13679 CLSA_c18820 CLSA_c18830 PF03618 CLSA_c18830 CLSA_c18840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c18840 PF12729 CLSA_c18840 CLSA_c18850 PF00733 Asparagine synthase CLSA_c18850 PF13537 Glutamine amidotransferase domain CLSA_c18860 PF00909 Ammonium Transporter Family CLSA_c18890 PF01554 MatE CLSA_c18920 PF07690 Major Facilitator Superfamily CLSA_c18930 PF01047 MarR family CLSA_c18950 PF00295 Glycosyl hydrolases family 28 CLSA_c18980 PF10114 CLSA_c18980 CLSA_c18990 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c18990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c18990 PF13426 PAS domain CLSA_c19000 PF00583 Acetyltransferase (GNAT) family CLSA_c19020 PF04055 Radical SAM superfamily CLSA_c19020 PF13186 Iron-sulfur cluster-binding domain CLSA_c19020 PF13394 4Fe-4S single cluster domain CLSA_c19040 PF01012 Electron transfer flavoprotein domain CLSA_c19050 PF00766 Electron transfer flavoprotein FAD-binding domain CLSA_c19050 PF01012 Electron transfer flavoprotein domain CLSA_c19060 PF02652 CLSA_c19060 CLSA_c19070 PF01565 FAD binding domain CLSA_c19070 PF02913 FAD linked oxidases, C-terminal domain CLSA_c19080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLSA_c19080 PF02770 Acyl-CoA dehydrogenase, middle domain CLSA_c19080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLSA_c19090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLSA_c19090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLSA_c19120 PF01473 Putative cell wall binding repeat CLSA_c19130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c19130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c19150 PF03551 Transcriptional regulator PadR-like family CLSA_c19160 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLSA_c19160 PF09989 CLSA_c19160 CLSA_c19170 PF00005 ABC transporter CLSA_c19190 PF01473 Putative cell wall binding repeat CLSA_c19190 PF07833 Copper amine oxidase N-terminal domain CLSA_c19200 PF00248 Aldo/keto reductase family CLSA_c19200 PF13534 4Fe-4S dicluster domain CLSA_c19210 PF14284 CLSA_c19210 CLSA_c19230 PF00271 Helicase conserved C-terminal domain CLSA_c19230 PF04851 Type III restriction enzyme, res subunit CLSA_c19230 PF13091 PLD-like domain CLSA_c19270 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c19300 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c19340 PF04994 TfoX C-terminal domain CLSA_c19350 PF14542 GCN5-related N-acetyl-transferase CLSA_c19360 PF13279 Thioesterase-like superfamily CLSA_c19370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c19370 PF12729 CLSA_c19370 CLSA_c19380 PF14278 CLSA_c19380 CLSA_c19390 PF14172 CLSA_c19390 CLSA_c19400 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c19410 PF16472 CLSA_c19410 CLSA_c19420 PF06445 GyrI-like small molecule binding domain CLSA_c19420 PF13411 MerR HTH family regulatory protein CLSA_c19430 PF00005 ABC transporter CLSA_c19430 PF00664 ABC transporter transmembrane region CLSA_c19440 PF00005 ABC transporter CLSA_c19440 PF00664 ABC transporter transmembrane region CLSA_c19460 PF13366 CLSA_c19460 CLSA_c19470 PF00356 Bacterial regulatory proteins, lacI family CLSA_c19470 PF13377 Periplasmic binding protein-like domain CLSA_c19480 PF01230 HIT domain CLSA_c19490 PF13347 MFS/sugar transport protein CLSA_c19500 PF02614 Glucuronate isomerase CLSA_c19510 PF01081 KDPG and KHG aldolase CLSA_c19520 PF00294 pfkB family carbohydrate kinase CLSA_c19530 PF01232 Mannitol dehydrogenase Rossmann domain CLSA_c19530 PF08125 Mannitol dehydrogenase C-terminal domain CLSA_c19540 PF04295 CLSA_c19540 CLSA_c19540 PF08666 SAF domain CLSA_c19550 PF09932 CLSA_c19550 CLSA_c19560 PF03551 Transcriptional regulator PadR-like family CLSA_c19580 PF00196 Bacterial regulatory proteins, luxR family CLSA_c19580 PF09860 CLSA_c19580 CLSA_c19590 PF01636 Phosphotransferase enzyme family CLSA_c19600 PF14903 CLSA_c19600 CLSA_c19610 PF04542 Sigma-70 region 2 CLSA_c19610 PF08281 Sigma-70, region 4 CLSA_c19620 PF13786 Domain of unknown function (DUF4179) CLSA_c19630 PF13520 Amino acid permease CLSA_c19650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c19650 PF02743 Cache domain CLSA_c19660 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c19690 PF07690 Major Facilitator Superfamily CLSA_c19700 PF00072 Response regulator receiver domain CLSA_c19700 PF04397 LytTr DNA-binding domain CLSA_c19710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c19710 PF06580 CLSA_c19710 CLSA_c19710 PF07694 5TMR of 5TMR-LYT CLSA_c19720 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c19720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c19730 PF00072 Response regulator receiver domain CLSA_c19730 PF00486 Transcriptional regulatory protein, C terminal CLSA_c19740 PF13349 CLSA_c19740 CLSA_c19780 PF01047 MarR family CLSA_c19790 PF01554 MatE CLSA_c19810 PF13021 CLSA_c19810 CLSA_c19820 PF01965 DJ-1/PfpI family CLSA_c19850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLSA_c19860 PF08874 CLSA_c19860 CLSA_c19860 PF12395 CLSA_c19860 CLSA_c19870 PF04542 Sigma-70 region 2 CLSA_c19870 PF08281 Sigma-70, region 4 CLSA_c19880 PF13786 Domain of unknown function (DUF4179) CLSA_c19890 PF00457 Glycosyl hydrolases family 11 CLSA_c19900 PF01881 CRISPR associated protein Cas6 CLSA_c19920 PF05107 CLSA_c19920 CLSA_c19930 PF09704 CRISPR-associated protein (Cas_Cas5) CLSA_c19950 PF00270 DEAD/DEAH box helicase CLSA_c19950 PF00271 Helicase conserved C-terminal domain CLSA_c19960 PF06445 GyrI-like small molecule binding domain CLSA_c19960 PF12833 Helix-turn-helix domain CLSA_c19980 PF03358 NADPH-dependent FMN reductase CLSA_c19990 PF13787 CLSA_c19990 CLSA_c20000 PF00440 Bacterial regulatory proteins, tetR family CLSA_c20020 PF01047 MarR family CLSA_c20030 PF01554 MatE CLSA_c20040 PF01739 CheR methyltransferase, SAM binding domain CLSA_c20040 PF03705 CheR methyltransferase, all-alpha domain CLSA_c20050 PF01584 CheW-like domain CLSA_c20050 PF01627 Hpt domain CLSA_c20050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20050 PF02895 Signal transducing histidine kinase, homodimeric domain CLSA_c20050 PF07194 P2 response regulator binding domain CLSA_c20060 PF00072 Response regulator receiver domain CLSA_c20060 PF01339 CheB methylesterase CLSA_c20070 PF01584 CheW-like domain CLSA_c20080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c20080 PF12729 CLSA_c20080 CLSA_c20090 PF00005 ABC transporter CLSA_c20100 PF02687 CLSA_c20100 CLSA_c20110 PF12801 CLSA_c20110 CLSA_c20110 PF13237 4Fe-4S dicluster domain CLSA_c20120 PF00005 ABC transporter CLSA_c20130 PF02687 CLSA_c20130 CLSA_c20140 PF00072 Response regulator receiver domain CLSA_c20140 PF00486 Transcriptional regulatory protein, C terminal CLSA_c20150 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20160 PF01473 Putative cell wall binding repeat CLSA_c20160 PF13306 Leucine rich repeats (6 copies) CLSA_c20170 PF04542 Sigma-70 region 2 CLSA_c20170 PF08281 Sigma-70, region 4 CLSA_c20180 PF13786 Domain of unknown function (DUF4179) CLSA_c20220 PF02517 CAAX protease self-immunity CLSA_c20230 PF00072 Response regulator receiver domain CLSA_c20230 PF00486 Transcriptional regulatory protein, C terminal CLSA_c20240 PF00005 ABC transporter CLSA_c20250 PF12730 CLSA_c20250 CLSA_c20270 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20280 PF03629 Domain of unknown function (DUF303) CLSA_c20290 PF03551 Transcriptional regulator PadR-like family CLSA_c20300 PF02311 AraC-like ligand binding domain CLSA_c20300 PF12833 Helix-turn-helix domain CLSA_c20310 PF00892 EamA-like transporter family CLSA_c20320 PF09391 Protein of unknown function (DUF2000) CLSA_c20340 PF00005 ABC transporter CLSA_c20350 PF01047 MarR family CLSA_c20360 PF13484 CLSA_c20360 CLSA_c20370 PF00990 GGDEF domain CLSA_c20370 PF07694 5TMR of 5TMR-LYT CLSA_c20380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c20390 PF01584 CheW-like domain CLSA_c20400 PF00072 Response regulator receiver domain CLSA_c20400 PF01339 CheB methylesterase CLSA_c20410 PF13646 HEAT repeats CLSA_c20420 PF01739 CheR methyltransferase, SAM binding domain CLSA_c20420 PF03705 CheR methyltransferase, all-alpha domain CLSA_c20430 PF00072 Response regulator receiver domain CLSA_c20440 PF01584 CheW-like domain CLSA_c20440 PF01627 Hpt domain CLSA_c20440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20440 PF02895 Signal transducing histidine kinase, homodimeric domain CLSA_c20450 PF00072 Response regulator receiver domain CLSA_c20460 PF13690 Chemotaxis phosphatase CheX CLSA_c20470 PF13690 Chemotaxis phosphatase CheX CLSA_c20480 PF01740 STAS domain CLSA_c20480 PF14361 CLSA_c20480 CLSA_c20490 PF01740 STAS domain CLSA_c20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20510 PF07228 Stage II sporulation protein E (SpoIIE) CLSA_c20510 PF13581 Histidine kinase-like ATPase domain CLSA_c20520 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20530 PF01627 Hpt domain CLSA_c20530 PF07194 P2 response regulator binding domain CLSA_c20540 PF00072 Response regulator receiver domain CLSA_c20560 PF13614 AAA domain CLSA_c20570 PF01584 CheW-like domain CLSA_c20580 PF00072 Response regulator receiver domain CLSA_c20590 PF00872 CLSA_c20590 CLSA_c20630 PF00158 Sigma-54 interaction domain CLSA_c20630 PF00874 PRD domain CLSA_c20630 PF03610 PTS system fructose IIA component CLSA_c20640 PF03610 PTS system fructose IIA component CLSA_c20650 PF03830 PTS system sorbose subfamily IIB component CLSA_c20660 PF03609 CLSA_c20660 CLSA_c20670 PF03613 CLSA_c20670 CLSA_c20680 PF00251 Glycosyl hydrolases family 32 N-terminal domain CLSA_c20680 PF01473 Putative cell wall binding repeat CLSA_c20680 PF08244 Glycosyl hydrolases family 32 C terminal CLSA_c20690 PF01473 Putative cell wall binding repeat CLSA_c20700 PF00356 Bacterial regulatory proteins, lacI family CLSA_c20700 PF13377 Periplasmic binding protein-like domain CLSA_c20730 PF12802 MarR family CLSA_c20740 PF13515 CLSA_c20740 CLSA_c20750 PF02525 Flavodoxin-like fold CLSA_c20790 PF13581 Histidine kinase-like ATPase domain CLSA_c20800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c20800 PF00672 HAMP domain CLSA_c20800 PF02743 Cache domain CLSA_c20810 PF01740 STAS domain CLSA_c20820 PF00989 PAS fold CLSA_c20820 PF07228 Stage II sporulation protein E (SpoIIE) CLSA_c20820 PF08448 PAS fold CLSA_c20840 PF00155 Aminotransferase class I and II CLSA_c20850 PF00072 Response regulator receiver domain CLSA_c20850 PF00486 Transcriptional regulatory protein, C terminal CLSA_c20860 PF00005 ABC transporter CLSA_c20870 PF12730 CLSA_c20870 CLSA_c20880 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20900 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CLSA_c20910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLSA_c20930 PF00580 UvrD/REP helicase N-terminal domain CLSA_c20940 PF16380 CLSA_c20940 CLSA_c20960 PF00072 Response regulator receiver domain CLSA_c20960 PF00486 Transcriptional regulatory protein, C terminal CLSA_c20970 PF01609 Transposase DDE domain CLSA_c20980 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c20990 PF00005 ABC transporter CLSA_c21000 PF02687 CLSA_c21000 CLSA_c21000 PF12704 MacB-like periplasmic core domain CLSA_c21020 PF00990 GGDEF domain CLSA_c21040 PF13641 Glycosyltransferase like family 2 CLSA_c21050 PF03170 Bacterial cellulose synthase subunit CLSA_c21060 PF07561 CLSA_c21060 CLSA_c21070 PF00122 E1-E2 ATPase CLSA_c21070 PF00702 haloacid dehalogenase-like hydrolase CLSA_c21080 PF02583 Metal-sensitive transcriptional repressor CLSA_c21090 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c21100 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c21110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLSA_c21120 PF00005 ABC transporter CLSA_c21130 PF00005 ABC transporter CLSA_c21130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLSA_c21140 PF00892 EamA-like transporter family CLSA_c21150 PF10096 CLSA_c21150 CLSA_c21160 PF11155 Domain of unknown function (DUF2935) CLSA_c21190 PF01047 MarR family CLSA_c21210 PF04324 BFD-like [2Fe-2S] binding domain CLSA_c21220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLSA_c21230 PF12730 CLSA_c21230 CLSA_c21240 PF12730 CLSA_c21240 CLSA_c21250 PF00005 ABC transporter CLSA_c21260 PF00072 Response regulator receiver domain CLSA_c21260 PF00486 Transcriptional regulatory protein, C terminal CLSA_c21270 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c21270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c21280 PF05857 CLSA_c21280 CLSA_c21300 PF02558 Ketopantoate reductase PanE/ApbA CLSA_c21300 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLSA_c21310 PF02660 CLSA_c21310 CLSA_c21320 PF08951 Enterocin A Immunity CLSA_c21340 PF13245 Part of AAA domain CLSA_c21350 PF07728 AAA domain (dynein-related subfamily) CLSA_c21370 PF07883 Cupin domain CLSA_c21380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLSA_c21380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLSA_c21390 PF04198 Putative sugar-binding domain CLSA_c21390 PF04545 Sigma-70, region 4 CLSA_c21400 PF00005 ABC transporter CLSA_c21410 PF02653 CLSA_c21410 CLSA_c21420 PF02653 CLSA_c21420 CLSA_c21430 PF13407 Periplasmic binding protein domain CLSA_c21450 PF00990 GGDEF domain CLSA_c21450 PF07694 5TMR of 5TMR-LYT CLSA_c21450 PF08448 PAS fold CLSA_c21450 PF13487 HD domain CLSA_c21460 PF04307 CLSA_c21460 CLSA_c21470 PF01473 Putative cell wall binding repeat CLSA_c21480 PF13308 YARHG domain CLSA_c21490 PF12796 Ankyrin repeats (3 copies) CLSA_c21500 PF09861 Domain of unknown function (DUF2088) CLSA_c21510 PF06445 GyrI-like small molecule binding domain CLSA_c21520 PF00665 Integrase core domain CLSA_c21520 PF13276 CLSA_c21520 CLSA_c21550 PF07719 Tetratricopeptide repeat CLSA_c21560 PF03551 Transcriptional regulator PadR-like family CLSA_c21570 PF07690 Major Facilitator Superfamily CLSA_c21580 PF01048 Phosphorylase superfamily CLSA_c21590 PF12822 Protein of unknown function (DUF3816) CLSA_c21600 PF02361 Cobalt transport protein CLSA_c21610 PF00005 ABC transporter CLSA_c21620 PF00005 ABC transporter CLSA_c21630 PF00990 GGDEF domain CLSA_c21640 PF00375 Sodium:dicarboxylate symporter family CLSA_c21650 PF01554 MatE CLSA_c21660 PF00580 UvrD/REP helicase N-terminal domain CLSA_c21660 PF13361 UvrD-like helicase C-terminal domain CLSA_c21670 PF12705 PD-(D/E)XK nuclease superfamily CLSA_c21680 PF00072 Response regulator receiver domain CLSA_c21680 PF00486 Transcriptional regulatory protein, C terminal CLSA_c21700 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c21700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c21710 PF07690 Major Facilitator Superfamily CLSA_c21720 PF02311 AraC-like ligand binding domain CLSA_c21720 PF12833 Helix-turn-helix domain CLSA_c21730 PF01554 MatE CLSA_c21750 PF12802 MarR family CLSA_c21760 PF01022 Bacterial regulatory protein, arsR family CLSA_c21770 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLSA_c21780 PF13783 CLSA_c21780 CLSA_c21790 PF02256 Iron hydrogenase small subunit CLSA_c21790 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLSA_c21790 PF12838 4Fe-4S dicluster domain CLSA_c21790 PF14697 4Fe-4S dicluster domain CLSA_c21820 PF01207 Dihydrouridine synthase (Dus) CLSA_c21830 PF00989 PAS fold CLSA_c21830 PF00990 GGDEF domain CLSA_c21830 PF13185 GAF domain CLSA_c21830 PF13426 PAS domain CLSA_c21830 PF16927 CLSA_c21830 CLSA_c21840 PF00075 RNase H CLSA_c21860 PF13527 Acetyltransferase (GNAT) domain CLSA_c21860 PF13530 Sterol carrier protein domain CLSA_c21870 PF00990 GGDEF domain CLSA_c21870 PF13185 GAF domain CLSA_c21880 PF13407 Periplasmic binding protein domain CLSA_c21890 PF00072 Response regulator receiver domain CLSA_c21890 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c21890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c21900 PF13407 Periplasmic binding protein domain CLSA_c21910 PF00072 Response regulator receiver domain CLSA_c21910 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c21910 PF12729 CLSA_c21910 CLSA_c21910 PF13185 GAF domain CLSA_c21920 PF01739 CheR methyltransferase, SAM binding domain CLSA_c21940 PF02696 CLSA_c21940 CLSA_c21950 PF00929 Exonuclease CLSA_c21980 PF06725 3D domain CLSA_c21990 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c22000 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c22010 PF00005 ABC transporter CLSA_c22020 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c22030 PF01966 HD domain CLSA_c22040 PF00072 Response regulator receiver domain CLSA_c22040 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c22040 PF01590 GAF domain CLSA_c22040 PF01627 Hpt domain CLSA_c22040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c22040 PF13426 PAS domain CLSA_c22050 PF00072 Response regulator receiver domain CLSA_c22060 PF01183 Glycosyl hydrolases family 25 CLSA_c22060 PF01473 Putative cell wall binding repeat CLSA_c22070 PF00849 RNA pseudouridylate synthase CLSA_c22070 PF01479 S4 domain CLSA_c22080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c22080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c22080 PF12838 4Fe-4S dicluster domain CLSA_c22100 PF00485 Phosphoribulokinase / Uridine kinase family CLSA_c22110 PF03830 PTS system sorbose subfamily IIB component CLSA_c22120 PF03609 CLSA_c22120 CLSA_c22130 PF03613 CLSA_c22130 CLSA_c22140 PF00455 CLSA_c22140 CLSA_c22140 PF08220 DeoR-like helix-turn-helix domain CLSA_c22150 PF00294 pfkB family carbohydrate kinase CLSA_c22160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLSA_c22160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c22160 PF02378 Phosphotransferase system, EIIC CLSA_c22180 PF01814 Hemerythrin HHE cation binding domain CLSA_c22190 PF00665 Integrase core domain CLSA_c22190 PF13276 CLSA_c22190 CLSA_c22210 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLSA_c22210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLSA_c22210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLSA_c22210 PF10371 Domain of unknown function CLSA_c22210 PF12838 4Fe-4S dicluster domain CLSA_c22210 PF17147 CLSA_c22210 CLSA_c22220 PF03961 CLSA_c22220 CLSA_c22230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLSA_c22230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLSA_c22250 PF04256 CLSA_c22250 CLSA_c22260 PF00005 ABC transporter CLSA_c22270 PF16949 CLSA_c22270 CLSA_c22280 PF00805 Pentapeptide repeats (8 copies) CLSA_c22280 PF13599 Pentapeptide repeats (9 copies) CLSA_c22290 PF02645 Uncharacterised protein, DegV family COG1307 CLSA_c22300 PF03551 Transcriptional regulator PadR-like family CLSA_c22310 PF03486 HI0933-like protein CLSA_c22320 PF02224 Cytidylate kinase CLSA_c22330 PF00575 S1 RNA binding domain CLSA_c22330 PF02401 LytB protein CLSA_c22340 PF00583 Acetyltransferase (GNAT) family CLSA_c22360 PF04020 CLSA_c22360 CLSA_c22370 PF00919 Uncharacterized protein family UPF0004 CLSA_c22370 PF01938 TRAM domain CLSA_c22370 PF04055 Radical SAM superfamily CLSA_c22420 PF04073 Aminoacyl-tRNA editing domain CLSA_c22430 PF00589 Phage integrase family CLSA_c22460 PF00717 Peptidase S24-like CLSA_c22460 PF01726 LexA DNA binding domain CLSA_c22470 PF06838 Methionine gamma-lyase CLSA_c22480 PF17209 CLSA_c22480 CLSA_c22490 PF01715 IPP transferase CLSA_c22500 PF01119 DNA mismatch repair protein, C-terminal domain CLSA_c22500 PF08676 MutL C terminal dimerisation domain CLSA_c22500 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c22540 PF00501 AMP-binding enzyme CLSA_c22540 PF13193 AMP-binding enzyme C-terminal domain CLSA_c22550 PF00501 AMP-binding enzyme CLSA_c22560 PF00766 Electron transfer flavoprotein FAD-binding domain CLSA_c22560 PF01012 Electron transfer flavoprotein domain CLSA_c22570 PF01012 Electron transfer flavoprotein domain CLSA_c22580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLSA_c22580 PF02770 Acyl-CoA dehydrogenase, middle domain CLSA_c22580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLSA_c22590 PF02515 CoA-transferase family III CLSA_c22600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLSA_c22600 PF02770 Acyl-CoA dehydrogenase, middle domain CLSA_c22600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLSA_c22610 PF00962 Adenosine/AMP deaminase CLSA_c22620 PF00860 Permease family CLSA_c22630 PF00465 Iron-containing alcohol dehydrogenase CLSA_c22640 PF00488 MutS domain V CLSA_c22640 PF01624 MutS domain I CLSA_c22640 PF05188 MutS domain II CLSA_c22640 PF05190 MutS family domain IV CLSA_c22640 PF05192 MutS domain III CLSA_c22650 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CLSA_c22700 PF02261 Aspartate decarboxylase CLSA_c22710 PF02569 Pantoate-beta-alanine ligase CLSA_c22720 PF02548 Ketopantoate hydroxymethyltransferase CLSA_c22730 PF10727 Rossmann-like domain CLSA_c22730 PF10728 Domain of unknown function (DUF2520) CLSA_c22740 PF00171 Aldehyde dehydrogenase family CLSA_c22750 PF00753 Metallo-beta-lactamase superfamily CLSA_c22750 PF07521 RNA-metabolising metallo-beta-lactamase CLSA_c22760 PF07875 CLSA_c22760 CLSA_c22770 PF01925 CLSA_c22770 CLSA_c22780 PF00581 Rhodanese-like domain CLSA_c22800 PF12844 Helix-turn-helix domain CLSA_c22830 PF00665 Integrase core domain CLSA_c22830 PF13276 CLSA_c22830 CLSA_c22840 PF07553 Host cell surface-exposed lipoprotein CLSA_c22860 PF12788 CLSA_c22860 CLSA_c22880 PF00959 Phage lysozyme CLSA_c22880 PF01473 Putative cell wall binding repeat CLSA_c22900 PF10779 CLSA_c22900 CLSA_c22910 PF01345 CLSA_c22910 CLSA_c22910 PF02368 Bacterial Ig-like domain (group 2) CLSA_c22950 PF10076 CLSA_c22950 CLSA_c22980 PF04865 CLSA_c22980 CLSA_c22990 PF10934 CLSA_c22990 CLSA_c23000 PF10844 CLSA_c23000 CLSA_c23010 PF00877 NlpC/P60 family CLSA_c23020 PF01476 LysM domain CLSA_c23050 PF08890 Phage XkdN-like protein CLSA_c23060 PF09393 Protein of unknown function (DUF2001) CLSA_c23070 PF17482 CLSA_c23070 CLSA_c23090 PF04883 CLSA_c23090 CLSA_c23120 PF03864 Phage major capsid protein E CLSA_c23150 PF00589 Phage integrase family CLSA_c23150 PF14657 CLSA_c23150 CLSA_c23150 PF14659 Phage integrase, N-terminal SAM-like domain CLSA_c23160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c23170 PF00581 Rhodanese-like domain CLSA_c23200 PF01924 Hydrogenase formation hypA family CLSA_c23210 PF00072 Response regulator receiver domain CLSA_c23220 PF00072 Response regulator receiver domain CLSA_c23220 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c23220 PF08447 PAS fold CLSA_c23220 PF13426 PAS domain CLSA_c23230 PF00440 Bacterial regulatory proteins, tetR family CLSA_c23230 PF08359 YsiA-like protein, C-terminal region CLSA_c23250 PF00072 Response regulator receiver domain CLSA_c23250 PF01339 CheB methylesterase CLSA_c23260 PF01739 CheR methyltransferase, SAM binding domain CLSA_c23270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c23280 PF01584 CheW-like domain CLSA_c23280 PF01627 Hpt domain CLSA_c23280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c23280 PF02895 Signal transducing histidine kinase, homodimeric domain CLSA_c23280 PF07194 P2 response regulator binding domain CLSA_c23290 PF01584 CheW-like domain CLSA_c23300 PF00072 Response regulator receiver domain CLSA_c23310 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c23310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c23320 PF00072 Response regulator receiver domain CLSA_c23320 PF00486 Transcriptional regulatory protein, C terminal CLSA_c23330 PF09851 CLSA_c23330 CLSA_c23340 PF10282 Lactonase, 7-bladed beta-propeller CLSA_c23360 PF00403 Heavy-metal-associated domain CLSA_c23380 PF00403 Heavy-metal-associated domain CLSA_c23380 PF13386 CLSA_c23380 CLSA_c23380 PF13473 Cupredoxin-like domain CLSA_c23390 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c23390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c23400 PF00072 Response regulator receiver domain CLSA_c23400 PF00486 Transcriptional regulatory protein, C terminal CLSA_c23420 PF01613 Flavin reductase like domain CLSA_c23430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c23430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c23440 PF02308 CLSA_c23440 CLSA_c23450 PF00176 SNF2 family N-terminal domain CLSA_c23450 PF00271 Helicase conserved C-terminal domain CLSA_c23450 PF04434 CLSA_c23450 CLSA_c23450 PF08455 CLSA_c23450 CLSA_c23470 PF00005 ABC transporter CLSA_c23470 PF12848 ABC transporter CLSA_c23470 PF16326 CLSA_c23470 CLSA_c23480 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 CLSA_c23490 PF13302 Acetyltransferase (GNAT) domain CLSA_c23500 PF01116 Fructose-bisphosphate aldolase class-II CLSA_c23520 PF02632 BioY family CLSA_c23530 PF06935 CLSA_c23530 CLSA_c23560 PF00290 Tryptophan synthase alpha chain CLSA_c23570 PF00291 Pyridoxal-phosphate dependent enzyme CLSA_c23580 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CLSA_c23590 PF00218 Indole-3-glycerol phosphate synthase CLSA_c23600 PF00591 Glycosyl transferase family, a/b domain CLSA_c23600 PF02885 Glycosyl transferase family, helical bundle domain CLSA_c23610 PF00117 Glutamine amidotransferase class-I CLSA_c23620 PF00425 chorismate binding enzyme CLSA_c23620 PF04715 Anthranilate synthase component I, N terminal region CLSA_c23630 PF02082 Transcriptional regulator CLSA_c23640 PF00270 DEAD/DEAH box helicase CLSA_c23640 PF00271 Helicase conserved C-terminal domain CLSA_c23650 PF01473 Putative cell wall binding repeat CLSA_c23660 PF00300 Histidine phosphatase superfamily (branch 1) CLSA_c23680 PF05598 CLSA_c23680 CLSA_c23680 PF13751 CLSA_c23680 CLSA_c23690 PF11187 Protein of unknown function (DUF2974) CLSA_c23700 PF13274 CLSA_c23700 CLSA_c23730 PF00580 UvrD/REP helicase N-terminal domain CLSA_c23730 PF00717 Peptidase S24-like CLSA_c23740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLSA_c23750 PF00872 CLSA_c23750 CLSA_c23760 PF00037 4Fe-4S binding domain CLSA_c23760 PF02256 Iron hydrogenase small subunit CLSA_c23760 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLSA_c23760 PF10531 SLBB domain CLSA_c23770 PF01384 CLSA_c23770 CLSA_c23780 PF01865 Protein of unknown function DUF47 CLSA_c23810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c23810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c23820 PF08984 Domain of unknown function (DUF1858) CLSA_c23830 PF17032 CLSA_c23830 CLSA_c23840 PF01546 Peptidase family M20/M25/M40 CLSA_c23840 PF07687 Peptidase dimerisation domain CLSA_c23850 PF01546 Peptidase family M20/M25/M40 CLSA_c23870 PF00959 Phage lysozyme CLSA_c23870 PF01473 Putative cell wall binding repeat CLSA_c23880 PF08282 haloacid dehalogenase-like hydrolase CLSA_c23890 PF12725 CLSA_c23890 CLSA_c23920 PF07155 ECF-type riboflavin transporter, S component CLSA_c23930 PF08141 CLSA_c23930 CLSA_c23950 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c23950 PF01434 Peptidase family M41 CLSA_c23950 PF06480 FtsH Extracellular CLSA_c23980 PF08282 haloacid dehalogenase-like hydrolase CLSA_c23990 PF00455 CLSA_c23990 CLSA_c23990 PF08220 DeoR-like helix-turn-helix domain CLSA_c24000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLSA_c24000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLSA_c24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c24020 PF13563 2'-5' RNA ligase superfamily CLSA_c24030 PF13411 MerR HTH family regulatory protein CLSA_c24040 PF01554 MatE CLSA_c24060 PF00301 Rubredoxin CLSA_c24060 PF01613 Flavin reductase like domain CLSA_c24070 PF03061 Thioesterase superfamily CLSA_c24080 PF00324 Amino acid permease CLSA_c24100 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c24110 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c24120 PF00005 ABC transporter CLSA_c24130 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CLSA_c24140 PF01183 Glycosyl hydrolases family 25 CLSA_c24140 PF01473 Putative cell wall binding repeat CLSA_c24150 PF00072 Response regulator receiver domain CLSA_c24150 PF01339 CheB methylesterase CLSA_c24160 PF01739 CheR methyltransferase, SAM binding domain CLSA_c24160 PF03705 CheR methyltransferase, all-alpha domain CLSA_c24170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c24170 PF00672 HAMP domain CLSA_c24170 PF12729 CLSA_c24170 CLSA_c24180 PF01584 CheW-like domain CLSA_c24190 PF01584 CheW-like domain CLSA_c24190 PF01627 Hpt domain CLSA_c24190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c24190 PF02895 Signal transducing histidine kinase, homodimeric domain CLSA_c24190 PF07194 P2 response regulator binding domain CLSA_c24200 PF00072 Response regulator receiver domain CLSA_c24210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c24210 PF00672 HAMP domain CLSA_c24210 PF12729 CLSA_c24210 CLSA_c24230 PF00665 Integrase core domain CLSA_c24230 PF13276 CLSA_c24230 CLSA_c24240 PF07690 Major Facilitator Superfamily CLSA_c24250 PF01047 MarR family CLSA_c24260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLSA_c24260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c24270 PF00882 Zinc dependent phospholipase C CLSA_c24280 PF00722 Glycosyl hydrolases family 16 CLSA_c24280 PF01473 Putative cell wall binding repeat CLSA_c24290 PF14199 CLSA_c24290 CLSA_c24310 PF01676 Metalloenzyme superfamily CLSA_c24320 PF01048 Phosphorylase superfamily CLSA_c24330 PF01773 Na+ dependent nucleoside transporter N-terminus CLSA_c24330 PF07662 Na+ dependent nucleoside transporter C-terminus CLSA_c24340 PF01048 Phosphorylase superfamily CLSA_c24350 PF00392 Bacterial regulatory proteins, gntR family CLSA_c24360 PF01773 Na+ dependent nucleoside transporter N-terminus CLSA_c24360 PF07662 Na+ dependent nucleoside transporter C-terminus CLSA_c24360 PF07670 Nucleoside recognition CLSA_c24400 PF04542 Sigma-70 region 2 CLSA_c24410 PF08378 CLSA_c24410 CLSA_c24420 PF08241 Methyltransferase domain CLSA_c24430 PF00753 Metallo-beta-lactamase superfamily CLSA_c24440 PF08765 Mor transcription activator family CLSA_c24450 PF00324 Amino acid permease CLSA_c24460 PF03600 Citrate transporter CLSA_c24470 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c24470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c24480 PF00072 Response regulator receiver domain CLSA_c24480 PF00486 Transcriptional regulatory protein, C terminal CLSA_c24490 PF12730 CLSA_c24490 CLSA_c24510 PF00005 ABC transporter CLSA_c24520 PF00005 ABC transporter CLSA_c24530 PF09084 NMT1/THI5 like CLSA_c24540 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c24550 PF01910 Domain of unknown function DUF77 CLSA_c24560 PF01026 TatD related DNase CLSA_c24580 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c24580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c24590 PF00072 Response regulator receiver domain CLSA_c24590 PF00486 Transcriptional regulatory protein, C terminal CLSA_c24600 PF13231 CLSA_c24600 CLSA_c24610 PF13289 CLSA_c24610 CLSA_c24630 PF00990 GGDEF domain CLSA_c24630 PF01966 HD domain CLSA_c24630 PF08448 PAS fold CLSA_c24650 PF07690 Major Facilitator Superfamily CLSA_c24660 PF01975 Survival protein SurE CLSA_c24670 PF00753 Metallo-beta-lactamase superfamily CLSA_c24680 PF00324 Amino acid permease CLSA_c24690 PF01670 Glycosyl hydrolase family 12 CLSA_c24700 PF02574 Homocysteine S-methyltransferase CLSA_c24710 PF09922 Cell wall-active antibiotics response protein (DUF2154) CLSA_c24720 PF04397 LytTr DNA-binding domain CLSA_c24730 PF00596 Class II Aldolase and Adducin N-terminal domain CLSA_c24740 PF01144 Coenzyme A transferase CLSA_c24760 PF01699 Sodium/calcium exchanger protein CLSA_c24770 PF11155 Domain of unknown function (DUF2935) CLSA_c24780 PF00892 EamA-like transporter family CLSA_c24800 PF03358 NADPH-dependent FMN reductase CLSA_c24820 PF01609 Transposase DDE domain CLSA_c24820 PF05598 CLSA_c24820 CLSA_c24830 PF13556 PucR C-terminal helix-turn-helix domain CLSA_c24840 PF06081 CLSA_c24840 CLSA_c24840 PF11728 DUF939 C-terminal domain CLSA_c24850 PF00733 Asparagine synthase CLSA_c24850 PF13537 Glutamine amidotransferase domain CLSA_c24860 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c24860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c24860 PF02743 Cache domain CLSA_c24880 PF01473 Putative cell wall binding repeat CLSA_c24890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c24890 PF12729 CLSA_c24890 CLSA_c24900 PF08020 Protein of unknown function (DUF1706) CLSA_c24910 PF00857 Isochorismatase family CLSA_c24920 PF07007 Protein of unknown function (DUF1311) CLSA_c24930 PF09827 CRISPR associated protein Cas2 CLSA_c24940 PF01867 CRISPR associated protein Cas1 CLSA_c24950 PF01930 Domain of unknown function DUF83 CLSA_c24960 PF00270 DEAD/DEAH box helicase CLSA_c24960 PF00271 Helicase conserved C-terminal domain CLSA_c24980 PF05107 CLSA_c24980 CLSA_c25000 PF01881 CRISPR associated protein Cas6 CLSA_c25010 PF07690 Major Facilitator Superfamily CLSA_c25030 PF01243 Pyridoxamine 5'-phosphate oxidase CLSA_c25040 PF01638 HxlR-like helix-turn-helix CLSA_c25050 PF12682 Flavodoxin CLSA_c25070 PF03942 CLSA_c25070 CLSA_c25080 PF01385 CLSA_c25080 CLSA_c25080 PF07282 CLSA_c25080 CLSA_c25080 PF12323 CLSA_c25080 CLSA_c25090 PF00239 Resolvase, N terminal domain CLSA_c25090 PF13411 MerR HTH family regulatory protein CLSA_c25100 PF02452 PemK-like protein CLSA_c25120 PF02581 Thiamine monophosphate synthase/TENI CLSA_c25130 PF06968 Biotin and Thiamin Synthesis associated domain CLSA_c25140 PF05690 Thiazole biosynthesis protein ThiG CLSA_c25150 PF00899 ThiF family CLSA_c25150 PF14453 CLSA_c25150 CLSA_c25160 PF02597 ThiS family CLSA_c25170 PF09861 Domain of unknown function (DUF2088) CLSA_c25180 PF05067 Manganese containing catalase CLSA_c25190 PF07875 CLSA_c25190 CLSA_c25200 PF07859 alpha/beta hydrolase fold CLSA_c25210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLSA_c25230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c25230 PF03466 LysR substrate binding domain CLSA_c25250 PF01136 CLSA_c25250 CLSA_c25250 PF16325 CLSA_c25250 CLSA_c25270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c25270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c25280 PF02666 CLSA_c25280 CLSA_c25290 PF04055 Radical SAM superfamily CLSA_c25290 PF06968 Biotin and Thiamin Synthesis associated domain CLSA_c25300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c25300 PF03466 LysR substrate binding domain CLSA_c25310 PF00300 Histidine phosphatase superfamily (branch 1) CLSA_c25320 PF07690 Major Facilitator Superfamily CLSA_c25330 PF00795 Carbon-nitrogen hydrolase CLSA_c25340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c25340 PF03466 LysR substrate binding domain CLSA_c25350 PF00701 Dihydrodipicolinate synthetase family CLSA_c25370 PF00155 Aminotransferase class I and II CLSA_c25370 PF00392 Bacterial regulatory proteins, gntR family CLSA_c25400 PF00149 Calcineurin-like phosphoesterase CLSA_c25410 PF00196 Bacterial regulatory proteins, luxR family CLSA_c25420 PF01061 CLSA_c25420 CLSA_c25430 PF01061 CLSA_c25430 CLSA_c25440 PF00005 ABC transporter CLSA_c25460 PF00069 Protein kinase domain CLSA_c25460 PF03793 PASTA domain CLSA_c25470 PF04402 Protein of unknown function (DUF541) CLSA_c25480 PF03358 NADPH-dependent FMN reductase CLSA_c25490 PF01638 HxlR-like helix-turn-helix CLSA_c25500 PF00293 NUDIX domain CLSA_c25510 PF00583 Acetyltransferase (GNAT) family CLSA_c25530 PF04246 CLSA_c25530 CLSA_c25540 PF00085 Thioredoxin CLSA_c25550 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c25580 PF12464 Maltose acetyltransferase CLSA_c25580 PF14602 Hexapeptide repeat of succinyl-transferase CLSA_c25590 PF00892 EamA-like transporter family CLSA_c25600 PF01613 Flavin reductase like domain CLSA_c25610 PF00109 Beta-ketoacyl synthase, N-terminal domain CLSA_c25610 PF02801 Beta-ketoacyl synthase, C-terminal domain CLSA_c25620 PF12833 Helix-turn-helix domain CLSA_c25620 PF14526 Integron-associated effector binding protein CLSA_c25640 PF13349 CLSA_c25640 CLSA_c25660 PF00120 Glutamine synthetase, catalytic domain CLSA_c25660 PF12437 Glutamine synthetase type III N terminal CLSA_c25680 PF07690 Major Facilitator Superfamily CLSA_c25690 PF00440 Bacterial regulatory proteins, tetR family CLSA_c25700 PF03358 NADPH-dependent FMN reductase CLSA_c25710 PF00173 Cytochrome b5-like Heme/Steroid binding domain CLSA_c25720 PF02811 PHP domain CLSA_c25730 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c25730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c25730 PF13426 PAS domain CLSA_c25740 PF01183 Glycosyl hydrolases family 25 CLSA_c25740 PF01473 Putative cell wall binding repeat CLSA_c25750 PF04531 CLSA_c25750 CLSA_c25780 PF00877 NlpC/P60 family CLSA_c25790 PF00156 Phosphoribosyl transferase domain CLSA_c25790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLSA_c25800 PF00271 Helicase conserved C-terminal domain CLSA_c25800 PF12513 Mitochondrial degradasome RNA helicase subunit C terminal CLSA_c25820 PF03961 CLSA_c25820 CLSA_c25830 PF01895 PhoU domain CLSA_c25830 PF02690 CLSA_c25830 CLSA_c25840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c25870 PF13599 Pentapeptide repeats (9 copies) CLSA_c25880 PF05673 Protein of unknown function (DUF815) CLSA_c25890 PF00860 Permease family CLSA_c25900 PF00293 NUDIX domain CLSA_c25910 PF06177 CLSA_c25910 CLSA_c25940 PF00929 Exonuclease CLSA_c25940 PF04851 Type III restriction enzyme, res subunit CLSA_c25940 PF13307 Helicase C-terminal domain CLSA_c25990 PF01131 DNA topoisomerase CLSA_c25990 PF01751 Toprim domain CLSA_c26000 PF04307 CLSA_c26000 CLSA_c26010 PF02421 Ferrous iron transport protein B CLSA_c26010 PF07664 CLSA_c26010 CLSA_c26010 PF07670 Nucleoside recognition CLSA_c26020 PF04023 FeoA domain CLSA_c26030 PF01473 Putative cell wall binding repeat CLSA_c26040 PF00196 Bacterial regulatory proteins, luxR family CLSA_c26050 PF02558 Ketopantoate reductase PanE/ApbA CLSA_c26050 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLSA_c26060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c26060 PF03466 LysR substrate binding domain CLSA_c26080 PF11185 CLSA_c26080 CLSA_c26090 PF08719 Domain of unknown function (DUF1768) CLSA_c26110 PF00313 'Cold-shock' DNA-binding domain CLSA_c26140 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLSA_c26140 PF13187 4Fe-4S dicluster domain CLSA_c26160 PF00905 Penicillin binding protein transpeptidase domain CLSA_c26160 PF03717 Penicillin-binding Protein dimerisation domain CLSA_c26160 PF05223 NTF2-like N-terminal transpeptidase domain CLSA_c26170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLSA_c26180 PF10719 CLSA_c26180 CLSA_c26190 PF01743 Poly A polymerase head domain CLSA_c26190 PF12627 Probable RNA and SrmB- binding site of polymerase A CLSA_c26190 PF13735 tRNA nucleotidyltransferase domain 2 putative CLSA_c26200 PF01380 SIS domain CLSA_c26200 PF01418 Helix-turn-helix domain, rpiR family CLSA_c26210 PF00849 RNA pseudouridylate synthase CLSA_c26210 PF01479 S4 domain CLSA_c26230 PF01553 Acyltransferase CLSA_c26240 PF13520 Amino acid permease CLSA_c26280 PF01473 Putative cell wall binding repeat CLSA_c26300 PF01134 Glucose inhibited division protein A CLSA_c26310 PF00768 D-alanyl-D-alanine carboxypeptidase CLSA_c26320 PF11167 CLSA_c26320 CLSA_c26330 PF09579 CLSA_c26330 CLSA_c26340 PF04079 Putative transcriptional regulators (Ypuh-like) CLSA_c26350 PF02616 ScpA/B protein CLSA_c26360 PF00768 D-alanyl-D-alanine carboxypeptidase CLSA_c26360 PF07943 Penicillin-binding protein 5, C-terminal domain CLSA_c26370 PF12727 PBP superfamily domain CLSA_c26370 PF12728 Helix-turn-helix domain CLSA_c26380 PF13531 Bacterial extracellular solute-binding protein CLSA_c26390 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c26400 PF00005 ABC transporter CLSA_c26410 PF13787 CLSA_c26410 CLSA_c26420 PF00994 Probable molybdopterin binding domain CLSA_c26430 PF03473 MOSC domain CLSA_c26440 PF04055 Radical SAM superfamily CLSA_c26440 PF06463 Molybdenum Cofactor Synthesis C CLSA_c26440 PF13353 4Fe-4S single cluster domain CLSA_c26450 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CLSA_c26460 PF01967 MoaC family CLSA_c26470 PF00994 Probable molybdopterin binding domain CLSA_c26470 PF03453 MoeA N-terminal region (domain I and II) CLSA_c26470 PF03454 MoeA C-terminal region (domain IV) CLSA_c26480 PF00994 Probable molybdopterin binding domain CLSA_c26490 PF12804 MobA-like NTP transferase domain CLSA_c26500 PF03595 Voltage-dependent anion channel CLSA_c26510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c26520 PF00037 4Fe-4S binding domain CLSA_c26520 PF13247 4Fe-4S dicluster domain CLSA_c26530 PF00384 Molybdopterin oxidoreductase CLSA_c26530 PF01568 Molydopterin dinucleotide binding domain CLSA_c26530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLSA_c26540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLSA_c26540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLSA_c26540 PF14697 4Fe-4S dicluster domain CLSA_c26550 PF00175 Oxidoreductase NAD-binding domain CLSA_c26550 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLSA_c26560 PF17179 CLSA_c26560 CLSA_c26570 PF00027 Cyclic nucleotide-binding domain CLSA_c26570 PF13545 Crp-like helix-turn-helix domain CLSA_c26580 PF07690 Major Facilitator Superfamily CLSA_c26590 PF00589 Phage integrase family CLSA_c26590 PF02899 Phage integrase, N-terminal SAM-like domain CLSA_c26600 PF01944 CLSA_c26600 CLSA_c26610 PF00860 Permease family CLSA_c26670 PF01473 Putative cell wall binding repeat CLSA_c26700 PF01609 Transposase DDE domain CLSA_c26710 PF00872 CLSA_c26710 CLSA_c26730 PF14319 CLSA_c26730 CLSA_c26750 PF02810 SEC-C motif CLSA_c26760 PF13730 CLSA_c26760 CLSA_c26770 PF00589 Phage integrase family CLSA_c26770 PF13102 Phage integrase SAM-like domain CLSA_c26780 PF00072 Response regulator receiver domain CLSA_c26780 PF08769 Sporulation initiation factor Spo0A C terminal CLSA_c26790 PF00595 PDZ domain (Also known as DHR or GLGF) CLSA_c26790 PF05580 CLSA_c26790 CLSA_c26800 PF02463 RecF/RecN/SMC N terminal domain CLSA_c26810 PF01316 Arginine repressor, DNA binding domain CLSA_c26810 PF02863 Arginine repressor, C-terminal domain CLSA_c26820 PF01513 ATP-NAD kinase CLSA_c26830 PF01479 S4 domain CLSA_c26830 PF01728 FtsJ-like methyltransferase CLSA_c26840 PF02779 Transketolase, pyrimidine binding domain CLSA_c26840 PF02780 Transketolase, C-terminal domain CLSA_c26840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLSA_c26850 PF00348 Polyprenyl synthetase CLSA_c26860 PF02609 Exonuclease VII small subunit CLSA_c26870 PF02601 CLSA_c26870 CLSA_c26870 PF13742 CLSA_c26870 CLSA_c26880 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLSA_c26880 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLSA_c26890 PF01029 NusB family CLSA_c26900 PF03780 CLSA_c26900 CLSA_c26910 PF12685 SpoIIIAH-like protein CLSA_c26930 PF09581 CLSA_c26930 CLSA_c26940 PF09546 CLSA_c26940 CLSA_c26950 PF06686 CLSA_c26950 CLSA_c26960 PF06686 CLSA_c26960 CLSA_c26970 PF09548 CLSA_c26970 CLSA_c27000 PF01132 Elongation factor P (EF-P) OB domain CLSA_c27000 PF08207 Elongation factor P (EF-P) KOW-like domain CLSA_c27000 PF09285 Elongation factor P, C-terminal CLSA_c27050 PF15980 CLSA_c27050 CLSA_c27070 PF07963 Prokaryotic N-terminal methylation motif CLSA_c27080 PF00482 Type II secretion system (T2SS), protein F CLSA_c27090 PF00437 Type II/IV secretion system protein CLSA_c27110 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c27120 PF00150 Cellulase (glycosyl hydrolase family 5) CLSA_c27140 PF01678 Diaminopimelate epimerase CLSA_c27150 PF05670 CLSA_c27150 CLSA_c27150 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CLSA_c27160 PF01380 SIS domain CLSA_c27160 PF01418 Helix-turn-helix domain, rpiR family CLSA_c27170 PF01170 Putative RNA methylase family UPF0020 CLSA_c27170 PF02926 THUMP domain CLSA_c27180 PF00156 Phosphoribosyl transferase domain CLSA_c27190 PF00849 RNA pseudouridylate synthase CLSA_c27190 PF01479 S4 domain CLSA_c27200 PF05103 DivIVA protein CLSA_c27210 PF01479 S4 domain CLSA_c27220 PF02325 CLSA_c27220 CLSA_c27230 PF04472 Protein of unknown function (DUF552) CLSA_c27240 PF01168 Alanine racemase, N-terminal domain CLSA_c27250 PF05949 Bacterial protein of unknown function (DUF881) CLSA_c27260 PF06947 CLSA_c27260 CLSA_c27270 PF05949 Bacterial protein of unknown function (DUF881) CLSA_c27280 PF03799 Cell division protein FtsQ CLSA_c27280 PF08478 POTRA domain, FtsQ-type CLSA_c27290 PF01098 CLSA_c27290 CLSA_c27300 PF00953 Glycosyl transferase family 4 CLSA_c27300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CLSA_c27310 PF01225 Mur ligase family, catalytic domain CLSA_c27310 PF02875 Mur ligase family, glutamate ligase domain CLSA_c27310 PF08245 Mur ligase middle domain CLSA_c27320 PF01225 Mur ligase family, catalytic domain CLSA_c27320 PF02875 Mur ligase family, glutamate ligase domain CLSA_c27320 PF08245 Mur ligase middle domain CLSA_c27330 PF00905 Penicillin binding protein transpeptidase domain CLSA_c27330 PF03717 Penicillin-binding Protein dimerisation domain CLSA_c27330 PF03793 PASTA domain CLSA_c27340 PF04999 CLSA_c27340 CLSA_c27350 PF01795 MraW methylase family CLSA_c27370 PF01588 Putative tRNA binding domain CLSA_c27370 PF03147 Ferredoxin-fold anticodon binding domain CLSA_c27370 PF03483 B3/4 domain CLSA_c27370 PF03484 tRNA synthetase B5 domain CLSA_c27380 PF01409 tRNA synthetases class II core domain (F) CLSA_c27380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLSA_c27390 PF00588 SpoU rRNA Methylase family CLSA_c27390 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLSA_c27400 PF00453 Ribosomal protein L20 CLSA_c27410 PF01632 Ribosomal protein L35 CLSA_c27420 PF00707 Translation initiation factor IF-3, C-terminal domain CLSA_c27420 PF05198 Translation initiation factor IF-3, N-terminal domain CLSA_c27430 PF08812 CLSA_c27430 CLSA_c27450 PF01609 Transposase DDE domain CLSA_c27470 PF01430 Hsp33 protein CLSA_c27480 PF13649 Methyltransferase domain CLSA_c27490 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c27500 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLSA_c27500 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLSA_c27510 PF00701 Dihydrodipicolinate synthetase family CLSA_c27520 PF01113 Dihydrodipicolinate reductase, N-terminus CLSA_c27520 PF05173 Dihydrodipicolinate reductase, C-terminus CLSA_c27540 PF06865 Protein of unknown function (DUF1255) CLSA_c27550 PF00155 Aminotransferase class I and II CLSA_c27560 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c27560 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CLSA_c27560 PF14602 Hexapeptide repeat of succinyl-transferase CLSA_c27570 PF00436 Single-strand binding protein family CLSA_c27580 PF01522 Polysaccharide deacetylase CLSA_c27590 PF14277 Domain of unknown function (DUF4364) CLSA_c27610 PF12637 CLSA_c27610 CLSA_c27620 PF08797 HIRAN domain CLSA_c27630 PF02875 Mur ligase family, glutamate ligase domain CLSA_c27630 PF08245 Mur ligase middle domain CLSA_c27640 PF03741 CLSA_c27640 CLSA_c27650 PF00133 tRNA synthetases class I (I, L, M and V) CLSA_c27650 PF08264 Anticodon-binding domain of tRNA CLSA_c27650 PF10458 Valyl tRNA synthetase tRNA binding arm CLSA_c27660 PF07853 CLSA_c27660 CLSA_c27680 PF03600 Citrate transporter CLSA_c27690 PF02016 LD-carboxypeptidase CLSA_c27700 PF00596 Class II Aldolase and Adducin N-terminal domain CLSA_c27710 PF01144 Coenzyme A transferase CLSA_c27720 PF01473 Putative cell wall binding repeat CLSA_c27730 PF03851 UV-endonuclease UvdE CLSA_c27750 PF01545 Cation efflux family CLSA_c27750 PF16916 CLSA_c27750 CLSA_c27760 PF12638 CLSA_c27760 CLSA_c27790 PF09992 Predicted periplasmic protein (DUF2233) CLSA_c27810 PF01554 MatE CLSA_c27830 PF09992 Predicted periplasmic protein (DUF2233) CLSA_c27840 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLSA_c27840 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLSA_c27840 PF09989 CLSA_c27840 CLSA_c27850 PF00515 Tetratricopeptide repeat CLSA_c27850 PF07720 Tetratricopeptide repeat CLSA_c27860 PF01841 Transglutaminase-like superfamily CLSA_c27870 PF02631 RecX family CLSA_c27880 PF00675 Insulinase (Peptidase family M16) CLSA_c27880 PF05193 Peptidase M16 inactive domain CLSA_c27890 PF00072 Response regulator receiver domain CLSA_c27890 PF00486 Transcriptional regulatory protein, C terminal CLSA_c27900 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c27900 PF00672 HAMP domain CLSA_c27900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c27910 PF00710 Asparaginase CLSA_c27920 PF13561 Enoyl-(Acyl carrier protein) reductase CLSA_c27930 PF01244 Membrane dipeptidase (Peptidase family M19) CLSA_c27940 PF00149 Calcineurin-like phosphoesterase CLSA_c27950 PF00464 Serine hydroxymethyltransferase CLSA_c27960 PF06738 CLSA_c27960 CLSA_c27970 PF12821 CLSA_c27970 CLSA_c28000 PF13520 Amino acid permease CLSA_c28010 PF00665 Integrase core domain CLSA_c28010 PF13276 CLSA_c28010 CLSA_c28020 PF00350 Dynamin family CLSA_c28030 PF00350 Dynamin family CLSA_c28050 PF00350 Dynamin family CLSA_c28080 PF13673 Acetyltransferase (GNAT) domain CLSA_c28090 PF00849 RNA pseudouridylate synthase CLSA_c28090 PF01479 S4 domain CLSA_c28100 PF00128 Alpha amylase, catalytic domain CLSA_c28120 PF00501 AMP-binding enzyme CLSA_c28120 PF13193 AMP-binding enzyme C-terminal domain CLSA_c28130 PF00108 Thiolase, N-terminal domain CLSA_c28130 PF02803 Thiolase, C-terminal domain CLSA_c28140 PF02632 BioY family CLSA_c28150 PF00005 ABC transporter CLSA_c28150 PF12848 ABC transporter CLSA_c28160 PF11208 CLSA_c28160 CLSA_c28170 PF07690 Major Facilitator Superfamily CLSA_c28180 PF00291 Pyridoxal-phosphate dependent enzyme CLSA_c28190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c28190 PF02743 Cache domain CLSA_c28210 PF13419 Haloacid dehalogenase-like hydrolase CLSA_c28220 PF00485 Phosphoribulokinase / Uridine kinase family CLSA_c28240 PF02559 CarD-like/TRCF domain CLSA_c28250 PF13451 CLSA_c28250 CLSA_c28270 PF07690 Major Facilitator Superfamily CLSA_c28280 PF07892 Protein of unknown function (DUF1667) CLSA_c28290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c28300 PF01266 FAD dependent oxidoreductase CLSA_c28300 PF04324 BFD-like [2Fe-2S] binding domain CLSA_c28310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLSA_c28310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLSA_c28320 PF04309 Glycerol-3-phosphate responsive antiterminator CLSA_c28330 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c28330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c28340 PF08495 CLSA_c28340 CLSA_c28340 PF10442 CLSA_c28340 CLSA_c28350 PF00742 Homoserine dehydrogenase CLSA_c28350 PF01842 ACT domain CLSA_c28350 PF03447 Homoserine dehydrogenase, NAD binding domain CLSA_c28370 PF00005 ABC transporter CLSA_c28370 PF00664 ABC transporter transmembrane region CLSA_c28380 PF00082 Subtilase family CLSA_c28400 PF00733 Asparagine synthase CLSA_c28400 PF13537 Glutamine amidotransferase domain CLSA_c28420 PF13471 CLSA_c28420 CLSA_c28430 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CLSA_c28440 PF14907 Uncharacterised nucleotidyltransferase CLSA_c28450 PF10609 ParA/MinD ATPase like CLSA_c28460 PF02706 Chain length determinant protein CLSA_c28470 PF16363 CLSA_c28470 CLSA_c28480 PF04321 RmlD substrate binding domain CLSA_c28490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLSA_c28500 PF00483 Nucleotidyl transferase CLSA_c28510 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term CLSA_c28510 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus CLSA_c28510 PF12838 4Fe-4S dicluster domain CLSA_c28520 PF04230 CLSA_c28520 CLSA_c28530 PF01943 CLSA_c28530 CLSA_c28530 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c28540 PF00534 Glycosyl transferases group 1 CLSA_c28550 PF00535 Glycosyl transferase family 2 CLSA_c28560 PF04932 CLSA_c28560 CLSA_c28570 PF00534 Glycosyl transferases group 1 CLSA_c28580 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c28590 PF00534 Glycosyl transferases group 1 CLSA_c28590 PF13439 Glycosyltransferase Family 4 CLSA_c28600 PF00534 Glycosyl transferases group 1 CLSA_c28600 PF09314 CLSA_c28600 CLSA_c28610 PF02397 CLSA_c28610 CLSA_c28620 PF09719 Putative redox-active protein (C_GCAxxG_C_C) CLSA_c28630 PF04474 CLSA_c28630 CLSA_c28640 PF00152 tRNA synthetases class II (D, K and N) CLSA_c28640 PF01336 OB-fold nucleic acid binding domain CLSA_c28640 PF02938 GAD domain CLSA_c28650 PF03129 Anticodon binding domain CLSA_c28650 PF13393 Histidyl-tRNA synthetase CLSA_c28660 PF04055 Radical SAM superfamily CLSA_c28670 PF00753 Metallo-beta-lactamase superfamily CLSA_c28680 PF02580 D-Tyr-tRNA(Tyr) deacylase CLSA_c28690 PF02824 TGS domain CLSA_c28690 PF04607 Region found in RelA / SpoT proteins CLSA_c28690 PF13291 ACT domain CLSA_c28690 PF13328 HD domain CLSA_c28700 PF00156 Phosphoribosyl transferase domain CLSA_c28720 PF02355 Protein export membrane protein CLSA_c28720 PF07549 SecD/SecF GG Motif CLSA_c28730 PF02355 Protein export membrane protein CLSA_c28740 PF12670 CLSA_c28740 CLSA_c28750 PF02699 Preprotein translocase subunit CLSA_c28760 PF01702 Queuine tRNA-ribosyltransferase CLSA_c28770 PF02547 Queuosine biosynthesis protein CLSA_c28780 PF05491 Holliday junction DNA helicase ruvB C-terminus CLSA_c28780 PF05496 Holliday junction DNA helicase ruvB N-terminus CLSA_c28790 PF01330 RuvA N terminal domain CLSA_c28790 PF07499 RuvA, C-terminal domain CLSA_c28790 PF14520 Helix-hairpin-helix domain CLSA_c28820 PF04055 Radical SAM superfamily CLSA_c28820 PF13186 Iron-sulfur cluster-binding domain CLSA_c28830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c28830 PF03466 LysR substrate binding domain CLSA_c28840 PF00390 Malic enzyme, N-terminal domain CLSA_c28840 PF03949 Malic enzyme, NAD binding domain CLSA_c28850 PF00939 Sodium:sulfate symporter transmembrane region CLSA_c28860 PF08543 Phosphomethylpyrimidine kinase CLSA_c28870 PF04055 Radical SAM superfamily CLSA_c28870 PF13394 4Fe-4S single cluster domain CLSA_c28880 PF01987 Mitochondrial biogenesis AIM24 CLSA_c28900 PF01569 PAP2 superfamily CLSA_c28910 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c28910 PF00672 HAMP domain CLSA_c28910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c28920 PF00072 Response regulator receiver domain CLSA_c28920 PF00486 Transcriptional regulatory protein, C terminal CLSA_c28930 PF07875 CLSA_c28930 CLSA_c28950 PF00107 Zinc-binding dehydrogenase CLSA_c28950 PF08240 Alcohol dehydrogenase GroES-like domain CLSA_c28950 PF13823 Alcohol dehydrogenase GroES-associated CLSA_c28960 PF07875 CLSA_c28960 CLSA_c28980 PF00912 Transglycosylase CLSA_c29030 PF13175 AAA ATPase domain CLSA_c29040 PF13476 AAA domain CLSA_c29080 PF06527 CLSA_c29080 CLSA_c29080 PF15978 CLSA_c29080 CLSA_c29090 PF13401 AAA domain CLSA_c29100 PF00665 Integrase core domain CLSA_c29100 PF09299 Mu transposase, C-terminal CLSA_c29110 PF08721 TnsA endonuclease C terminal CLSA_c29110 PF08722 TnsA endonuclease N terminal CLSA_c29130 PF00589 Phage integrase family CLSA_c29170 PF12640 CLSA_c29170 CLSA_c29180 PF12952 CLSA_c29180 CLSA_c29190 PF00583 Acetyltransferase (GNAT) family CLSA_c29240 PF06406 StbA protein CLSA_c29290 PF08874 CLSA_c29290 CLSA_c29290 PF12395 CLSA_c29290 CLSA_c29300 PF02229 Transcriptional Coactivator p15 (PC4) CLSA_c29310 PF03235 CLSA_c29310 CLSA_c29310 PF07510 CLSA_c29310 CLSA_c29320 PF01863 Protein of unknown function DUF45 CLSA_c29340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLSA_c29340 PF04851 Type III restriction enzyme, res subunit CLSA_c29340 PF11867 CLSA_c29340 CLSA_c29350 PF07693 CLSA_c29350 CLSA_c29360 PF01420 Type I restriction modification DNA specificity domain CLSA_c29380 PF02384 N-6 DNA Methylase CLSA_c29380 PF12161 HsdM N-terminal domain CLSA_c29460 PF05635 23S rRNA-intervening sequence protein CLSA_c29470 PF13538 UvrD-like helicase C-terminal domain CLSA_c29470 PF13604 AAA domain CLSA_c29470 PF14490 Helix-hairpin-helix containing domain CLSA_c29490 PF13154 CLSA_c29490 CLSA_c29490 PF13155 Toprim-like CLSA_c29510 PF06866 CLSA_c29510 CLSA_c29530 PF02661 Fic/DOC family CLSA_c29550 PF01381 Helix-turn-helix CLSA_c29560 PF12844 Helix-turn-helix domain CLSA_c29570 PF13087 AAA domain CLSA_c29600 PF14057 CLSA_c29600 CLSA_c29610 PF02498 CLSA_c29610 CLSA_c29630 PF06406 StbA protein CLSA_c29680 PF01223 DNA/RNA non-specific endonuclease CLSA_c29690 PF00959 Phage lysozyme CLSA_c29690 PF01473 Putative cell wall binding repeat CLSA_c29710 PF10779 CLSA_c29710 CLSA_c29720 PF02368 Bacterial Ig-like domain (group 2) CLSA_c29730 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c29760 PF12571 CLSA_c29760 CLSA_c29770 PF10076 CLSA_c29770 CLSA_c29780 PF04865 CLSA_c29780 CLSA_c29790 PF10934 CLSA_c29790 CLSA_c29800 PF10844 CLSA_c29800 CLSA_c29810 PF00877 NlpC/P60 family CLSA_c29820 PF01476 LysM domain CLSA_c29860 PF09393 Protein of unknown function (DUF2001) CLSA_c29870 PF04984 Phage tail sheath protein CLSA_c29870 PF17482 CLSA_c29870 CLSA_c29890 PF04883 CLSA_c29890 CLSA_c29920 PF03864 Phage major capsid protein E CLSA_c29940 PF14265 CLSA_c29940 CLSA_c29950 PF04233 CLSA_c29950 CLSA_c29970 PF05133 Phage portal protein, SPP1 Gp6-like CLSA_c29990 PF00239 Resolvase, N terminal domain CLSA_c30050 PF01555 DNA methylase CLSA_c30060 PF01807 CHC2 zinc finger CLSA_c30130 PF02732 ERCC4 domain CLSA_c30140 PF07463 NUMOD4 motif CLSA_c30140 PF13392 HNH endonuclease CLSA_c30150 PF01507 Phosphoadenosine phosphosulfate reductase family CLSA_c30160 PF01381 Helix-turn-helix CLSA_c30250 PF04014 Antidote-toxin recognition MazE CLSA_c30260 PF13443 Cro/C1-type HTH DNA-binding domain CLSA_c30270 PF01381 Helix-turn-helix CLSA_c30300 PF01381 Helix-turn-helix CLSA_c30310 PF01381 Helix-turn-helix CLSA_c30320 PF00589 Phage integrase family CLSA_c30320 PF13102 Phage integrase SAM-like domain CLSA_c30330 PF14057 CLSA_c30330 CLSA_c30380 PF00892 EamA-like transporter family CLSA_c30400 PF04542 Sigma-70 region 2 CLSA_c30400 PF08281 Sigma-70, region 4 CLSA_c30420 PF00355 Rieske [2Fe-2S] domain CLSA_c30420 PF01266 FAD dependent oxidoreductase CLSA_c30430 PF00557 Metallopeptidase family M24 CLSA_c30430 PF02810 SEC-C motif CLSA_c30440 PF01381 Helix-turn-helix CLSA_c30450 PF00037 4Fe-4S binding domain CLSA_c30450 PF04015 CLSA_c30450 CLSA_c30460 PF00571 CBS domain CLSA_c30460 PF01595 CLSA_c30460 CLSA_c30460 PF03471 Transporter associated domain CLSA_c30470 PF01435 Peptidase family M48 CLSA_c30490 PF01471 Putative peptidoglycan binding domain CLSA_c30500 PF00027 Cyclic nucleotide-binding domain CLSA_c30500 PF13545 Crp-like helix-turn-helix domain CLSA_c30510 PF00882 Zinc dependent phospholipase C CLSA_c30520 PF13242 HAD-hyrolase-like CLSA_c30520 PF13344 Haloacid dehalogenase-like hydrolase CLSA_c30550 PF01661 Macro domain CLSA_c30560 PF02915 Rubrerythrin CLSA_c30580 PF00226 DnaJ domain CLSA_c30600 PF00224 Pyruvate kinase, barrel domain CLSA_c30610 PF16224 CLSA_c30610 CLSA_c30620 PF13520 Amino acid permease CLSA_c30630 PF02811 PHP domain CLSA_c30640 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLSA_c30650 PF02603 HPr Serine kinase N terminus CLSA_c30650 PF07475 HPr Serine kinase C-terminal domain CLSA_c30660 PF05979 Bacterial protein of unknown function (DUF896) CLSA_c30680 PF06949 CLSA_c30680 CLSA_c30700 PF12706 Beta-lactamase superfamily domain CLSA_c30710 PF01609 Transposase DDE domain CLSA_c30720 PF00809 Pterin binding enzyme CLSA_c30720 PF02310 B12 binding domain CLSA_c30720 PF02574 Homocysteine S-methyltransferase CLSA_c30720 PF02607 B12 binding domain CLSA_c30730 PF02965 Vitamin B12 dependent methionine synthase, activation domain CLSA_c30740 PF02664 S-Ribosylhomocysteinase (LuxS) CLSA_c30750 PF00953 Glycosyl transferase family 4 CLSA_c30760 PF01813 ATP synthase subunit D CLSA_c30770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLSA_c30770 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLSA_c30780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLSA_c30780 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLSA_c30780 PF16886 CLSA_c30780 CLSA_c30790 PF01990 ATP synthase (F/14-kDa) subunit CLSA_c30800 PF01992 ATP synthase (C/AC39) subunit CLSA_c30810 PF01991 ATP synthase (E/31 kDa) subunit CLSA_c30820 PF00137 ATP synthase subunit C CLSA_c30830 PF01496 V-type ATPase 116kDa subunit family CLSA_c30850 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CLSA_c30850 PF02785 Biotin carboxylase C-terminal domain CLSA_c30850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLSA_c30860 PF00364 Biotin-requiring enzyme CLSA_c30870 PF02626 Allophanate hydrolase subunit 2 CLSA_c30880 PF02682 Allophanate hydrolase subunit 1 CLSA_c30890 PF00842 Alanine racemase, C-terminal domain CLSA_c30890 PF01168 Alanine racemase, N-terminal domain CLSA_c30900 PF03746 LamB/YcsF family CLSA_c30910 PF07286 Protein of unknown function (DUF1445) CLSA_c30920 PF14336 Domain of unknown function (DUF4392) CLSA_c30930 PF01063 Aminotransferase class IV CLSA_c30950 PF01037 AsnC family CLSA_c30950 PF13404 AsnC-type helix-turn-helix domain CLSA_c30960 PF02310 B12 binding domain CLSA_c30960 PF04055 Radical SAM superfamily CLSA_c30960 PF13311 CLSA_c30960 CLSA_c30970 PF14566 Inositol hexakisphosphate CLSA_c30980 PF00654 Voltage gated chloride channel CLSA_c30990 PF02537 CLSA_c30990 CLSA_c31020 PF01943 CLSA_c31020 CLSA_c31020 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c31030 PF01943 CLSA_c31030 CLSA_c31030 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c31040 PF00849 RNA pseudouridylate synthase CLSA_c31040 PF01479 S4 domain CLSA_c31050 PF01546 Peptidase family M20/M25/M40 CLSA_c31050 PF07687 Peptidase dimerisation domain CLSA_c31060 PF14450 Cell division protein FtsA CLSA_c31070 PF05598 CLSA_c31070 CLSA_c31070 PF13751 CLSA_c31070 CLSA_c31090 PF00580 UvrD/REP helicase N-terminal domain CLSA_c31090 PF13361 UvrD-like helicase C-terminal domain CLSA_c31100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLSA_c31140 PF01475 Ferric uptake regulator family CLSA_c31190 PF01926 50S ribosome-binding GTPase CLSA_c31200 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c31200 PF02190 ATP-dependent protease La (LON) domain CLSA_c31200 PF05362 Lon protease (S16) C-terminal proteolytic domain CLSA_c31210 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c31210 PF05362 Lon protease (S16) C-terminal proteolytic domain CLSA_c31220 PF06689 ClpX C4-type zinc finger CLSA_c31220 PF07724 AAA domain (Cdc48 subfamily) CLSA_c31220 PF10431 C-terminal, D2-small domain, of ClpB protein CLSA_c31230 PF00574 Clp protease CLSA_c31240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLSA_c31240 PF05697 Bacterial trigger factor protein (TF) CLSA_c31240 PF05698 Bacterial trigger factor protein (TF) C-terminus CLSA_c31270 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLSA_c31280 PF01502 Phosphoribosyl-AMP cyclohydrolase CLSA_c31290 PF00977 Histidine biosynthesis protein CLSA_c31300 PF00977 Histidine biosynthesis protein CLSA_c31310 PF00117 Glutamine amidotransferase class-I CLSA_c31320 PF00475 Imidazoleglycerol-phosphate dehydratase CLSA_c31330 PF00155 Aminotransferase class I and II CLSA_c31340 PF00815 Histidinol dehydrogenase CLSA_c31350 PF01634 ATP phosphoribosyltransferase CLSA_c31360 PF13393 Histidyl-tRNA synthetase CLSA_c31370 PF06912 CLSA_c31370 CLSA_c31380 PF02568 Thiamine biosynthesis protein (ThiI) CLSA_c31380 PF02926 THUMP domain CLSA_c31390 PF00266 Aminotransferase class-V CLSA_c31400 PF13487 HD domain CLSA_c31410 PF01966 HD domain CLSA_c31430 PF04607 Region found in RelA / SpoT proteins CLSA_c31440 PF13786 Domain of unknown function (DUF4179) CLSA_c31450 PF04542 Sigma-70 region 2 CLSA_c31450 PF08281 Sigma-70, region 4 CLSA_c31460 PF00375 Sodium:dicarboxylate symporter family CLSA_c31470 PF01225 Mur ligase family, catalytic domain CLSA_c31470 PF02875 Mur ligase family, glutamate ligase domain CLSA_c31470 PF08245 Mur ligase middle domain CLSA_c31480 PF02311 AraC-like ligand binding domain CLSA_c31480 PF12833 Helix-turn-helix domain CLSA_c31500 PF13291 ACT domain CLSA_c31510 PF00288 GHMP kinases N terminal domain CLSA_c31510 PF08544 GHMP kinases C terminal CLSA_c31520 PF00291 Pyridoxal-phosphate dependent enzyme CLSA_c31520 PF14821 Threonine synthase N terminus CLSA_c31540 PF07859 alpha/beta hydrolase fold CLSA_c31550 PF12983 CLSA_c31550 CLSA_c31560 PF02677 CLSA_c31560 CLSA_c31570 PF13673 Acetyltransferase (GNAT) domain CLSA_c31580 PF03734 L,D-transpeptidase catalytic domain CLSA_c31590 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c31590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c31600 PF00072 Response regulator receiver domain CLSA_c31600 PF00486 Transcriptional regulatory protein, C terminal CLSA_c31610 PF03734 L,D-transpeptidase catalytic domain CLSA_c31610 PF12229 Putative peptidoglycan binding domain CLSA_c31640 PF00056 lactate/malate dehydrogenase, NAD binding domain CLSA_c31640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLSA_c31650 PF00202 Aminotransferase class-III CLSA_c31660 PF00490 Delta-aminolevulinic acid dehydratase CLSA_c31670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c31670 PF02602 Uroporphyrinogen-III synthase HemD CLSA_c31680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLSA_c31680 PF03900 Porphobilinogen deaminase, C-terminal domain CLSA_c31690 PF13241 Putative NAD(P)-binding CLSA_c31700 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CLSA_c31700 PF01488 Shikimate / quinate 5-dehydrogenase CLSA_c31700 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLSA_c31770 PF05954 Phage late control gene D protein (GPD) CLSA_c31780 PF14107 CLSA_c31780 CLSA_c31820 PF01609 Transposase DDE domain CLSA_c31850 PF01255 Putative undecaprenyl diphosphate synthase CLSA_c31860 PF06961 CLSA_c31860 CLSA_c31870 PF04204 Homoserine O-succinyltransferase CLSA_c31880 PF10282 Lactonase, 7-bladed beta-propeller CLSA_c31890 PF01979 Amidohydrolase family CLSA_c31890 PF13382 Adenine deaminase C-terminal domain CLSA_c31900 PF01966 HD domain CLSA_c31910 PF08282 haloacid dehalogenase-like hydrolase CLSA_c31920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLSA_c31930 PF02659 CLSA_c31930 CLSA_c31960 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLSA_c31960 PF13500 AAA domain CLSA_c31970 PF01902 ATP-binding region CLSA_c31980 PF00155 Aminotransferase class I and II CLSA_c31990 PF03186 CLSA_c31990 CLSA_c32000 PF00300 Histidine phosphatase superfamily (branch 1) CLSA_c32010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLSA_c32020 PF02654 CLSA_c32020 CLSA_c32030 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLSA_c32040 PF02589 Uncharacterised ACR, YkgG family COG1556 CLSA_c32050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CLSA_c32060 PF02361 Cobalt transport protein CLSA_c32070 PF00005 ABC transporter CLSA_c32070 PF12558 CLSA_c32070 CLSA_c32080 PF07155 ECF-type riboflavin transporter, S component CLSA_c32090 PF02277 Phosphoribosyltransferase CLSA_c32120 PF04199 Putative cyclase CLSA_c32130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLSA_c32140 PF02571 CLSA_c32140 CLSA_c32150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c32160 PF02574 Homocysteine S-methyltransferase CLSA_c32180 PF00072 Response regulator receiver domain CLSA_c32180 PF08220 DeoR-like helix-turn-helix domain CLSA_c32190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c32190 PF13596 PAS domain CLSA_c32190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLSA_c32190 PF17203 CLSA_c32190 CLSA_c32200 PF00871 Acetokinase family CLSA_c32210 PF03812 CLSA_c32210 CLSA_c32220 PF00390 Malic enzyme, N-terminal domain CLSA_c32220 PF03949 Malic enzyme, NAD binding domain CLSA_c32240 PF04055 Radical SAM superfamily CLSA_c32240 PF13353 4Fe-4S single cluster domain CLSA_c32250 PF02659 CLSA_c32250 CLSA_c32260 PF01871 AMMECR1 CLSA_c32260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLSA_c32280 PF03984 CLSA_c32280 CLSA_c32300 PF02705 CLSA_c32300 CLSA_c32310 PF00703 Glycosyl hydrolases family 2 CLSA_c32310 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CLSA_c32310 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLSA_c32310 PF02929 Beta galactosidase small chain CLSA_c32310 PF16353 CLSA_c32310 CLSA_c32320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c32320 PF02743 Cache domain CLSA_c32330 PF13463 Winged helix DNA-binding domain CLSA_c32340 PF01699 Sodium/calcium exchanger protein CLSA_c32350 PF00356 Bacterial regulatory proteins, lacI family CLSA_c32350 PF13377 Periplasmic binding protein-like domain CLSA_c32370 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c32370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c32380 PF00072 Response regulator receiver domain CLSA_c32380 PF00486 Transcriptional regulatory protein, C terminal CLSA_c32390 PF01966 HD domain CLSA_c32400 PF04011 LemA family CLSA_c32410 PF04536 TLP18 CLSA_c32420 PF01544 CorA-like Mg2+ transporter protein CLSA_c32430 PF01890 Cobalamin synthesis G C-terminus CLSA_c32430 PF11760 Cobalamin synthesis G N-terminal CLSA_c32440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c32450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c32460 PF13847 Methyltransferase domain CLSA_c32470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c32480 PF01888 CbiD CLSA_c32500 PF02570 Precorrin-8X methylmutase CLSA_c32510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLSA_c32510 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLSA_c32520 PF06180 Cobalt chelatase (CbiK) CLSA_c32530 PF00990 GGDEF domain CLSA_c32540 PF01048 Phosphorylase superfamily CLSA_c32550 PF16079 CLSA_c32550 CLSA_c32560 PF06964 Alpha-L-arabinofuranosidase C-terminus CLSA_c32570 PF02535 CLSA_c32570 CLSA_c32640 PF01473 Putative cell wall binding repeat CLSA_c32650 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c32650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c32650 PF17159 CLSA_c32650 CLSA_c32660 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c32660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c32660 PF10114 CLSA_c32660 CLSA_c32660 PF13426 PAS domain CLSA_c32670 PF04336 CLSA_c32670 CLSA_c32680 PF01545 Cation efflux family CLSA_c32680 PF16916 CLSA_c32680 CLSA_c32690 PF01497 Periplasmic binding protein CLSA_c32700 PF01032 FecCD transport family CLSA_c32710 PF00005 ABC transporter CLSA_c32720 PF00872 CLSA_c32720 CLSA_c32730 PF01717 Cobalamin-independent synthase, Catalytic domain CLSA_c32740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c32740 PF03466 LysR substrate binding domain CLSA_c32750 PF02553 CLSA_c32750 CLSA_c32760 PF01891 Cobalt uptake substrate-specific transmembrane region CLSA_c32770 PF00005 ABC transporter CLSA_c32780 PF02361 Cobalt transport protein CLSA_c32790 PF07969 Amidohydrolase family CLSA_c32810 PF07875 CLSA_c32810 CLSA_c32830 PF07875 CLSA_c32830 CLSA_c32860 PF00654 Voltage gated chloride channel CLSA_c32860 PF02080 TrkA-C domain CLSA_c32870 PF00072 Response regulator receiver domain CLSA_c32870 PF04397 LytTr DNA-binding domain CLSA_c32890 PF12127 CLSA_c32890 CLSA_c32900 PF01957 NfeD-like C-terminal, partner-binding CLSA_c32910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c32910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLSA_c32920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c32920 PF03466 LysR substrate binding domain CLSA_c32930 PF00892 EamA-like transporter family CLSA_c32940 PF01345 CLSA_c32940 CLSA_c32940 PF02368 Bacterial Ig-like domain (group 2) CLSA_c32950 PF02952 L-fucose isomerase, C-terminal domain CLSA_c32960 PF16161 CLSA_c32960 CLSA_c32970 PF00456 Transketolase, thiamine diphosphate binding domain CLSA_c32970 PF02779 Transketolase, pyrimidine binding domain CLSA_c32970 PF02780 Transketolase, C-terminal domain CLSA_c32980 PF00923 Transaldolase CLSA_c32990 PF00480 ROK family CLSA_c32990 PF13412 Winged helix-turn-helix DNA-binding CLSA_c33000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLSA_c33000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLSA_c33010 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c33020 PF04239 Protein of unknown function (DUF421) CLSA_c33030 PF14276 CLSA_c33030 CLSA_c33040 PF07870 CLSA_c33040 CLSA_c33050 PF04239 Protein of unknown function (DUF421) CLSA_c33050 PF07870 CLSA_c33050 CLSA_c33060 PF03862 CLSA_c33060 CLSA_c33070 PF07451 Stage V sporulation protein AD (SpoVAD) CLSA_c33080 PF03862 CLSA_c33080 CLSA_c33090 PF07870 CLSA_c33090 CLSA_c33110 PF02588 CLSA_c33110 CLSA_c33110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLSA_c33120 PF01814 Hemerythrin HHE cation binding domain CLSA_c33130 PF13407 Periplasmic binding protein domain CLSA_c33140 PF16472 CLSA_c33140 CLSA_c33150 PF01569 PAP2 superfamily CLSA_c33160 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLSA_c33160 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLSA_c33170 PF01566 CLSA_c33170 CLSA_c33180 PF06965 Na+/H+ antiporter 1 CLSA_c33190 PF00571 CBS domain CLSA_c33190 PF01595 CLSA_c33190 CLSA_c33190 PF03471 Transporter associated domain CLSA_c33200 PF00543 Nitrogen regulatory protein P-II CLSA_c33210 PF00005 ABC transporter CLSA_c33220 PF00005 ABC transporter CLSA_c33220 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLSA_c33230 PF02653 CLSA_c33230 CLSA_c33240 PF02653 CLSA_c33240 CLSA_c33250 PF13458 Periplasmic binding protein CLSA_c33260 PF00005 ABC transporter CLSA_c33270 PF00005 ABC transporter CLSA_c33270 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLSA_c33290 PF02653 CLSA_c33290 CLSA_c33300 PF13458 Periplasmic binding protein CLSA_c33320 PF01943 CLSA_c33320 CLSA_c33320 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c33330 PF00300 Histidine phosphatase superfamily (branch 1) CLSA_c33340 PF05569 BlaR1 peptidase M56 CLSA_c33350 PF03965 Penicillinase repressor CLSA_c33360 PF13302 Acetyltransferase (GNAT) domain CLSA_c33370 PF04239 Protein of unknown function (DUF421) CLSA_c33380 PF13739 Domain of unknown function (DUF4163) CLSA_c33390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLSA_c33400 PF00293 NUDIX domain CLSA_c33420 PF01098 CLSA_c33420 CLSA_c33450 PF01381 Helix-turn-helix CLSA_c33450 PF07883 Cupin domain CLSA_c33460 PF13536 Multidrug resistance efflux transporter CLSA_c33470 PF13630 CLSA_c33470 CLSA_c33480 PF00005 ABC transporter CLSA_c33490 PF01544 CorA-like Mg2+ transporter protein CLSA_c33500 PF12724 Flavodoxin domain CLSA_c33510 PF02659 CLSA_c33510 CLSA_c33530 PF00854 POT family CLSA_c33550 PF02096 60Kd inner membrane protein CLSA_c33560 PF02694 CLSA_c33560 CLSA_c33580 PF00881 Nitroreductase family CLSA_c33590 PF02525 Flavodoxin-like fold CLSA_c33610 PF06314 Acetoacetate decarboxylase (ADC) CLSA_c33620 PF01144 Coenzyme A transferase CLSA_c33630 PF01144 Coenzyme A transferase CLSA_c33640 PF00171 Aldehyde dehydrogenase family CLSA_c33680 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c33680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c33690 PF00072 Response regulator receiver domain CLSA_c33690 PF00486 Transcriptional regulatory protein, C terminal CLSA_c33700 PF05525 CLSA_c33700 CLSA_c33730 PF08821 CLSA_c33730 CLSA_c33750 PF09388 Spo0E like sporulation regulatory protein CLSA_c33760 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c33770 PF00756 Putative esterase CLSA_c33780 PF00990 GGDEF domain CLSA_c33780 PF08447 PAS fold CLSA_c33780 PF13426 PAS domain CLSA_c33780 PF13487 HD domain CLSA_c33790 PF00027 Cyclic nucleotide-binding domain CLSA_c33790 PF13545 Crp-like helix-turn-helix domain CLSA_c33800 PF13419 Haloacid dehalogenase-like hydrolase CLSA_c33810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLSA_c33810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLSA_c33820 PF00302 Chloramphenicol acetyltransferase CLSA_c33860 PF00005 ABC transporter CLSA_c33870 PF00392 Bacterial regulatory proteins, gntR family CLSA_c33920 PF00122 E1-E2 ATPase CLSA_c33920 PF00689 Cation transporting ATPase, C-terminus CLSA_c33920 PF00690 Cation transporter/ATPase, N-terminus CLSA_c33920 PF00702 haloacid dehalogenase-like hydrolase CLSA_c33930 PF04286 CLSA_c33930 CLSA_c33970 PF00122 E1-E2 ATPase CLSA_c33970 PF00702 haloacid dehalogenase-like hydrolase CLSA_c33980 PF00872 CLSA_c33980 CLSA_c34010 PF00754 F5/8 type C domain CLSA_c34010 PF01473 Putative cell wall binding repeat CLSA_c34010 PF07532 CLSA_c34010 CLSA_c34010 PF07550 CLSA_c34010 CLSA_c34020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c34040 PF07690 Major Facilitator Superfamily CLSA_c34050 PF03547 CLSA_c34050 CLSA_c34060 PF00440 Bacterial regulatory proteins, tetR family CLSA_c34060 PF08361 MAATS-type transcriptional repressor, C-terminal region CLSA_c34070 PF03795 YCII-related domain CLSA_c34090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c34090 PF12729 CLSA_c34090 CLSA_c34100 PF00440 Bacterial regulatory proteins, tetR family CLSA_c34100 PF13305 WHG domain CLSA_c34110 PF07690 Major Facilitator Superfamily CLSA_c34120 PF00857 Isochorismatase family CLSA_c34140 PF01473 Putative cell wall binding repeat CLSA_c34140 PF13306 Leucine rich repeats (6 copies) CLSA_c34160 PF00440 Bacterial regulatory proteins, tetR family CLSA_c34170 PF00881 Nitroreductase family CLSA_c34170 PF13187 4Fe-4S dicluster domain CLSA_c34180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLSA_c34180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLSA_c34200 PF07859 alpha/beta hydrolase fold CLSA_c34210 PF09997 CLSA_c34210 CLSA_c34220 PF01473 Putative cell wall binding repeat CLSA_c34240 PF13561 Enoyl-(Acyl carrier protein) reductase CLSA_c34260 PF01047 MarR family CLSA_c34270 PF13419 Haloacid dehalogenase-like hydrolase CLSA_c34280 PF02796 Helix-turn-helix domain of resolvase CLSA_c34280 PF12784 CLSA_c34280 CLSA_c34290 PF01381 Helix-turn-helix CLSA_c34320 PF08668 HDOD domain CLSA_c34330 PF00258 Flavodoxin CLSA_c34330 PF13187 4Fe-4S dicluster domain CLSA_c34350 PF13302 Acetyltransferase (GNAT) domain CLSA_c34380 PF01042 Endoribonuclease L-PSP CLSA_c34390 PF00583 Acetyltransferase (GNAT) family CLSA_c34410 PF02796 Helix-turn-helix domain of resolvase CLSA_c34410 PF12784 CLSA_c34410 CLSA_c34420 PF07690 Major Facilitator Superfamily CLSA_c34430 PF03551 Transcriptional regulator PadR-like family CLSA_c34440 PF11667 CLSA_c34440 CLSA_c34450 PF13411 MerR HTH family regulatory protein CLSA_c34460 PF02567 Phenazine biosynthesis-like protein CLSA_c34470 PF00300 Histidine phosphatase superfamily (branch 1) CLSA_c34480 PF13304 AAA domain CLSA_c34480 PF13476 AAA domain CLSA_c34510 PF00583 Acetyltransferase (GNAT) family CLSA_c34520 PF13649 Methyltransferase domain CLSA_c34540 PF04993 TfoX N-terminal domain CLSA_c34570 PF01473 Putative cell wall binding repeat CLSA_c34570 PF16472 CLSA_c34570 CLSA_c34590 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLSA_c34610 PF00753 Metallo-beta-lactamase superfamily CLSA_c34630 PF06821 Serine hydrolase CLSA_c34670 PF13302 Acetyltransferase (GNAT) domain CLSA_c34680 PF12675 CLSA_c34680 CLSA_c34690 PF01522 Polysaccharide deacetylase CLSA_c34710 PF14196 CLSA_c34710 CLSA_c34720 PF01473 Putative cell wall binding repeat CLSA_c34720 PF01841 Transglutaminase-like superfamily CLSA_c34730 PF13407 Periplasmic binding protein domain CLSA_c34740 PF01473 Putative cell wall binding repeat CLSA_c34740 PF01841 Transglutaminase-like superfamily CLSA_c34750 PF13483 Beta-lactamase superfamily domain CLSA_c34760 PF13305 WHG domain CLSA_c34780 PF00390 Malic enzyme, N-terminal domain CLSA_c34780 PF03949 Malic enzyme, NAD binding domain CLSA_c34790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c34790 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLSA_c34800 PF01293 Phosphoenolpyruvate carboxykinase CLSA_c34810 PF06826 CLSA_c34810 CLSA_c34820 PF04303 PrpF protein CLSA_c34830 PF00330 Aconitase family (aconitate hydratase) CLSA_c34830 PF00694 Aconitase C-terminal domain CLSA_c34840 PF03802 CLSA_c34840 CLSA_c34850 PF04223 Citrate lyase, alpha subunit (CitF) CLSA_c34860 PF03328 HpcH/HpaI aldolase/citrate lyase family CLSA_c34870 PF06857 CLSA_c34870 CLSA_c34880 PF08218 Citrate lyase ligase C-terminal domain CLSA_c34880 PF13673 Acetyltransferase (GNAT) domain CLSA_c34890 PF00392 Bacterial regulatory proteins, gntR family CLSA_c34890 PF07729 FCD domain CLSA_c34900 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLSA_c34910 PF00324 Amino acid permease CLSA_c34960 PF01473 Putative cell wall binding repeat CLSA_c34960 PF13306 Leucine rich repeats (6 copies) CLSA_c34980 PF07883 Cupin domain CLSA_c34990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c35000 PF13420 Acetyltransferase (GNAT) domain CLSA_c35020 PF01554 MatE CLSA_c35030 PF01609 Transposase DDE domain CLSA_c35030 PF05598 CLSA_c35030 CLSA_c35040 PF01473 Putative cell wall binding repeat CLSA_c35040 PF13306 Leucine rich repeats (6 copies) CLSA_c35050 PF08241 Methyltransferase domain CLSA_c35070 PF01841 Transglutaminase-like superfamily CLSA_c35080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c35080 PF12729 CLSA_c35080 CLSA_c35100 PF07872 CLSA_c35100 CLSA_c35110 PF11148 CLSA_c35110 CLSA_c35120 PF05593 CLSA_c35120 CLSA_c35130 PF15586 CLSA_c35130 CLSA_c35140 PF00665 Integrase core domain CLSA_c35150 PF13518 Helix-turn-helix domain CLSA_c35170 PF14436 CLSA_c35170 CLSA_c35190 PF05593 CLSA_c35190 CLSA_c35200 PF05076 Suppressor of fused protein (SUFU) CLSA_c35220 PF03691 CLSA_c35220 CLSA_c35230 PF14411 CLSA_c35230 CLSA_c35240 PF12784 CLSA_c35240 CLSA_c35290 PF16219 CLSA_c35290 CLSA_c35310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c35310 PF12729 CLSA_c35310 CLSA_c35320 PF00440 Bacterial regulatory proteins, tetR family CLSA_c35330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c35330 PF13682 Chemoreceptor zinc-binding domain CLSA_c35350 PF10779 CLSA_c35350 CLSA_c35390 PF10076 CLSA_c35390 CLSA_c35410 PF04865 CLSA_c35410 CLSA_c35420 PF10934 CLSA_c35420 CLSA_c35450 PF08239 Bacterial SH3 domain CLSA_c35460 PF10145 CLSA_c35460 CLSA_c35480 PF08890 Phage XkdN-like protein CLSA_c35490 PF09393 Protein of unknown function (DUF2001) CLSA_c35500 PF04984 Phage tail sheath protein CLSA_c35500 PF17481 CLSA_c35500 CLSA_c35500 PF17482 CLSA_c35500 CLSA_c35550 PF03864 Phage major capsid protein E CLSA_c35570 PF06810 CLSA_c35570 CLSA_c35580 PF05133 Phage portal protein, SPP1 Gp6-like CLSA_c35590 PF17289 CLSA_c35590 CLSA_c35600 PF01541 GIY-YIG catalytic domain CLSA_c35610 PF03237 Terminase-like family CLSA_c35620 PF03592 Terminase small subunit CLSA_c35620 PF10668 CLSA_c35620 CLSA_c35690 PF01695 IstB-like ATP binding protein CLSA_c35710 PF07561 CLSA_c35710 CLSA_c35720 PF13560 Helix-turn-helix domain CLSA_c35730 PF01381 Helix-turn-helix CLSA_c35740 PF06114 Domain of unknown function (DUF955) CLSA_c35750 PF13518 Helix-turn-helix domain CLSA_c35760 PF00665 Integrase core domain CLSA_c35780 PF00005 ABC transporter CLSA_c35800 PF02796 Helix-turn-helix domain of resolvase CLSA_c35810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c35810 PF02743 Cache domain CLSA_c35830 PF06353 CLSA_c35830 CLSA_c35840 PF12833 Helix-turn-helix domain CLSA_c35840 PF14526 Integron-associated effector binding protein CLSA_c35850 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CLSA_c35860 PF07739 TipAS antibiotic-recognition domain CLSA_c35860 PF13411 MerR HTH family regulatory protein CLSA_c35870 PF10026 CLSA_c35870 CLSA_c35880 PF13411 MerR HTH family regulatory protein CLSA_c35890 PF00106 short chain dehydrogenase CLSA_c35900 PF00112 Papain family cysteine protease CLSA_c35910 PF00544 Pectate lyase CLSA_c35920 PF00857 Isochorismatase family CLSA_c35930 PF01037 AsnC family CLSA_c35930 PF13404 AsnC-type helix-turn-helix domain CLSA_c35940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c35940 PF03466 LysR substrate binding domain CLSA_c35950 PF01161 Phosphatidylethanolamine-binding protein CLSA_c35960 PF01808 AICARFT/IMPCHase bienzyme CLSA_c35970 PF00893 Small Multidrug Resistance protein CLSA_c35980 PF17314 CLSA_c35980 CLSA_c36050 PF00072 Response regulator receiver domain CLSA_c36050 PF00486 Transcriptional regulatory protein, C terminal CLSA_c36060 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c36060 PF00672 HAMP domain CLSA_c36060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c36070 PF00753 Metallo-beta-lactamase superfamily CLSA_c36080 PF04199 Putative cyclase CLSA_c36090 PF01047 MarR family CLSA_c36110 PF00232 Glycosyl hydrolase family 1 CLSA_c36120 PF01380 SIS domain CLSA_c36120 PF01418 Helix-turn-helix domain, rpiR family CLSA_c36130 PF12833 Helix-turn-helix domain CLSA_c36140 PF00465 Iron-containing alcohol dehydrogenase CLSA_c36160 PF01613 Flavin reductase like domain CLSA_c36170 PF01613 Flavin reductase like domain CLSA_c36180 PF02082 Transcriptional regulator CLSA_c36190 PF01243 Pyridoxamine 5'-phosphate oxidase CLSA_c36200 PF13187 4Fe-4S dicluster domain CLSA_c36210 PF01638 HxlR-like helix-turn-helix CLSA_c36220 PF03358 NADPH-dependent FMN reductase CLSA_c36230 PF10088 CLSA_c36230 CLSA_c36270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c36270 PF03466 LysR substrate binding domain CLSA_c36280 PF03601 CLSA_c36280 CLSA_c36300 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c36300 PF00672 HAMP domain CLSA_c36300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c36310 PF00072 Response regulator receiver domain CLSA_c36310 PF00486 Transcriptional regulatory protein, C terminal CLSA_c36320 PF00535 Glycosyl transferase family 2 CLSA_c36330 PF04754 CLSA_c36330 CLSA_c36340 PF07866 Protein of unknown function (DUF1653) CLSA_c36360 PF00488 MutS domain V CLSA_c36370 PF08279 HTH domain CLSA_c36370 PF13280 CLSA_c36370 CLSA_c36380 PF01965 DJ-1/PfpI family CLSA_c36390 PF00072 Response regulator receiver domain CLSA_c36390 PF12833 Helix-turn-helix domain CLSA_c36400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c36400 PF02743 Cache domain CLSA_c36400 PF06580 CLSA_c36400 CLSA_c36410 PF01547 Bacterial extracellular solute-binding protein CLSA_c36430 PF13407 Periplasmic binding protein domain CLSA_c36440 PF02653 CLSA_c36440 CLSA_c36450 PF00005 ABC transporter CLSA_c36470 PF12799 Leucine Rich repeats (2 copies) CLSA_c36490 PF14567 SMI1-KNR4 cell-wall CLSA_c36500 PF14411 CLSA_c36500 CLSA_c36520 PF14414 CLSA_c36520 CLSA_c36530 PF01609 Transposase DDE domain CLSA_c36540 PF01548 CLSA_c36540 CLSA_c36540 PF02371 CLSA_c36540 CLSA_c36560 PF14436 CLSA_c36560 CLSA_c36580 PF13518 Helix-turn-helix domain CLSA_c36610 PF13599 Pentapeptide repeats (9 copies) CLSA_c36650 PF14107 CLSA_c36650 CLSA_c36660 PF05954 Phage late control gene D protein (GPD) CLSA_c36730 PF00005 ABC transporter CLSA_c36750 PF00933 Glycosyl hydrolase family 3 N terminal domain CLSA_c36750 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLSA_c36750 PF14310 Fibronectin type III-like domain CLSA_c36760 PF02311 AraC-like ligand binding domain CLSA_c36760 PF12833 Helix-turn-helix domain CLSA_c36770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c36770 PF12729 CLSA_c36770 CLSA_c36780 PF00072 Response regulator receiver domain CLSA_c36780 PF12833 Helix-turn-helix domain CLSA_c36790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c36790 PF08448 PAS fold CLSA_c36790 PF13426 PAS domain CLSA_c36800 PF13673 Acetyltransferase (GNAT) domain CLSA_c36810 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c36810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c36810 PF07796 CLSA_c36810 CLSA_c36820 PF13407 Periplasmic binding protein domain CLSA_c36830 PF13407 Periplasmic binding protein domain CLSA_c36850 PF07875 CLSA_c36850 CLSA_c36860 PF13187 4Fe-4S dicluster domain CLSA_c36870 PF01522 Polysaccharide deacetylase CLSA_c36880 PF00005 ABC transporter CLSA_c36880 PF00664 ABC transporter transmembrane region CLSA_c36890 PF00005 ABC transporter CLSA_c36890 PF00664 ABC transporter transmembrane region CLSA_c36900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c36900 PF03466 LysR substrate binding domain CLSA_c36910 PF13443 Cro/C1-type HTH DNA-binding domain CLSA_c36920 PF11188 CLSA_c36920 CLSA_c36930 PF11188 CLSA_c36930 CLSA_c36940 PF04073 Aminoacyl-tRNA editing domain CLSA_c36950 PF13238 AAA domain CLSA_c36960 PF01638 HxlR-like helix-turn-helix CLSA_c36970 PF00881 Nitroreductase family CLSA_c36970 PF12838 4Fe-4S dicluster domain CLSA_c36980 PF01061 CLSA_c36980 CLSA_c36990 PF00005 ABC transporter CLSA_c37010 PF02627 Carboxymuconolactone decarboxylase family CLSA_c37020 PF00563 EAL domain CLSA_c37020 PF00990 GGDEF domain CLSA_c37060 PF00005 ABC transporter CLSA_c37060 PF00664 ABC transporter transmembrane region CLSA_c37070 PF00082 Subtilase family CLSA_c37100 PF04055 Radical SAM superfamily CLSA_c37100 PF13353 4Fe-4S single cluster domain CLSA_c37140 PF00440 Bacterial regulatory proteins, tetR family CLSA_c37150 PF13437 HlyD family secretion protein CLSA_c37150 PF13533 Biotin-lipoyl like CLSA_c37160 PF00873 AcrB/AcrD/AcrF family CLSA_c37170 PF03734 L,D-transpeptidase catalytic domain CLSA_c37170 PF12229 Putative peptidoglycan binding domain CLSA_c37180 PF06172 Cupin superfamily (DUF985) CLSA_c37190 PF00583 Acetyltransferase (GNAT) family CLSA_c37200 PF00892 EamA-like transporter family CLSA_c37210 PF13673 Acetyltransferase (GNAT) domain CLSA_c37220 PF00188 Cysteine-rich secretory protein family CLSA_c37220 PF08239 Bacterial SH3 domain CLSA_c37240 PF13407 Periplasmic binding protein domain CLSA_c37250 PF01473 Putative cell wall binding repeat CLSA_c37270 PF04542 Sigma-70 region 2 CLSA_c37270 PF08281 Sigma-70, region 4 CLSA_c37280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c37280 PF02743 Cache domain CLSA_c37290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c37290 PF02743 Cache domain CLSA_c37300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c37300 PF02743 Cache domain CLSA_c37320 PF00959 Phage lysozyme CLSA_c37320 PF01471 Putative peptidoglycan binding domain CLSA_c37350 PF10960 CLSA_c37350 CLSA_c37370 PF13407 Periplasmic binding protein domain CLSA_c37380 PF00188 Cysteine-rich secretory protein family CLSA_c37380 PF01473 Putative cell wall binding repeat CLSA_c37390 PF04542 Sigma-70 region 2 CLSA_c37400 PF17118 CLSA_c37400 CLSA_c37410 PF00293 NUDIX domain CLSA_c37410 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CLSA_c37410 PF09297 NADH pyrophosphatase zinc ribbon domain CLSA_c37420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c37420 PF12729 CLSA_c37420 CLSA_c37440 PF00069 Protein kinase domain CLSA_c37440 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c37440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c37440 PF08447 PAS fold CLSA_c37440 PF13191 AAA ATPase domain CLSA_c37450 PF00704 Glycosyl hydrolases family 18 CLSA_c37470 PF04542 Sigma-70 region 2 CLSA_c37470 PF08281 Sigma-70, region 4 CLSA_c37480 PF08713 DNA alkylation repair enzyme CLSA_c37490 PF01272 Transcription elongation factor, GreA/GreB, C-term CLSA_c37490 PF03449 Transcription elongation factor, N-terminal CLSA_c37500 PF01047 MarR family CLSA_c37510 PF07690 Major Facilitator Superfamily CLSA_c37520 PF01047 MarR family CLSA_c37530 PF07690 Major Facilitator Superfamily CLSA_c37540 PF00873 AcrB/AcrD/AcrF family CLSA_c37550 PF13533 Biotin-lipoyl like CLSA_c37550 PF16576 CLSA_c37550 CLSA_c37560 PF00072 Response regulator receiver domain CLSA_c37560 PF00486 Transcriptional regulatory protein, C terminal CLSA_c37570 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c37570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c37580 PF14323 GxGYxY sequence motif in domain of unknown function CLSA_c37580 PF14566 Inositol hexakisphosphate CLSA_c37580 PF16216 CLSA_c37580 CLSA_c37610 PF05569 BlaR1 peptidase M56 CLSA_c37620 PF03965 Penicillinase repressor CLSA_c37630 PF00753 Metallo-beta-lactamase superfamily CLSA_c37640 PF00501 AMP-binding enzyme CLSA_c37640 PF00550 Phosphopantetheine attachment site CLSA_c37640 PF00668 Condensation domain CLSA_c37640 PF13193 AMP-binding enzyme C-terminal domain CLSA_c37640 PF13847 Methyltransferase domain CLSA_c37650 PF00501 AMP-binding enzyme CLSA_c37650 PF00550 Phosphopantetheine attachment site CLSA_c37650 PF00668 Condensation domain CLSA_c37650 PF13193 AMP-binding enzyme C-terminal domain CLSA_c37670 PF00929 Exonuclease CLSA_c37670 PF02811 PHP domain CLSA_c37670 PF07733 Bacterial DNA polymerase III alpha subunit CLSA_c37670 PF11490 CLSA_c37670 CLSA_c37670 PF14480 CLSA_c37670 CLSA_c37670 PF14579 Helix-hairpin-helix motif CLSA_c37680 PF01047 MarR family CLSA_c37690 PF08241 Methyltransferase domain CLSA_c37700 PF11155 Domain of unknown function (DUF2935) CLSA_c37710 PF03458 CLSA_c37710 CLSA_c37720 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CLSA_c37740 PF08951 Enterocin A Immunity CLSA_c37750 PF01721 Class II bacteriocin CLSA_c37760 PF03321 GH3 auxin-responsive promoter CLSA_c37770 PF00255 Glutathione peroxidase CLSA_c37780 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c37790 PF13520 Amino acid permease CLSA_c37810 PF04324 BFD-like [2Fe-2S] binding domain CLSA_c37820 PF01741 Large-conductance mechanosensitive channel, MscL CLSA_c37840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c37840 PF02743 Cache domain CLSA_c37850 PF01987 Mitochondrial biogenesis AIM24 CLSA_c37860 PF00027 Cyclic nucleotide-binding domain CLSA_c37860 PF13545 Crp-like helix-turn-helix domain CLSA_c37870 PF00171 Aldehyde dehydrogenase family CLSA_c37880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLSA_c37880 PF03466 LysR substrate binding domain CLSA_c37890 PF12706 Beta-lactamase superfamily domain CLSA_c37900 PF10006 CLSA_c37900 CLSA_c37910 PF01814 Hemerythrin HHE cation binding domain CLSA_c37910 PF04405 CLSA_c37910 CLSA_c37920 PF00258 Flavodoxin CLSA_c37930 PF00171 Aldehyde dehydrogenase family CLSA_c37940 PF00175 Oxidoreductase NAD-binding domain CLSA_c37940 PF00970 Oxidoreductase FAD-binding domain CLSA_c37960 PF00258 Flavodoxin CLSA_c37960 PF00753 Metallo-beta-lactamase superfamily CLSA_c37970 PF00027 Cyclic nucleotide-binding domain CLSA_c37970 PF13545 Crp-like helix-turn-helix domain CLSA_c37990 PF13529 Peptidase_C39 like family CLSA_c38000 PF03063 Prismane/CO dehydrogenase family CLSA_c38010 PF01814 Hemerythrin HHE cation binding domain CLSA_c38010 PF04282 CLSA_c38010 CLSA_c38020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c38030 PF01473 Putative cell wall binding repeat CLSA_c38030 PF12733 CLSA_c38030 CLSA_c38040 PF03738 Glutathionylspermidine synthase preATP-grasp CLSA_c38080 PF02698 DUF218 domain CLSA_c38090 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c38110 PF01966 HD domain CLSA_c38120 PF06161 CLSA_c38120 CLSA_c38130 PF01674 Lipase (class 2) CLSA_c38140 PF01145 SPFH domain / Band 7 family CLSA_c38150 PF03831 PhnA protein CLSA_c38150 PF08274 PhnA Zinc-Ribbon CLSA_c38160 PF01522 Polysaccharide deacetylase CLSA_c38170 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c38170 PF00672 HAMP domain CLSA_c38170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c38190 PF00535 Glycosyl transferase family 2 CLSA_c38200 PF00175 Oxidoreductase NAD-binding domain CLSA_c38200 PF01794 CLSA_c38200 CLSA_c38200 PF08022 CLSA_c38200 CLSA_c38210 PF01066 CDP-alcohol phosphatidyltransferase CLSA_c38220 PF03741 CLSA_c38220 CLSA_c38230 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CLSA_c38240 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CLSA_c38250 PF13520 Amino acid permease CLSA_c38260 PF06277 Ethanolamine utilisation protein EutA CLSA_c38280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c38290 PF12671 CLSA_c38290 CLSA_c38300 PF13539 D-alanyl-D-alanine carboxypeptidase CLSA_c38310 PF00474 Sodium:solute symporter family CLSA_c38330 PF13091 PLD-like domain CLSA_c38330 PF13396 CLSA_c38330 CLSA_c38340 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLSA_c38340 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLSA_c38350 PF00923 Transaldolase CLSA_c38360 PF02779 Transketolase, pyrimidine binding domain CLSA_c38360 PF02780 Transketolase, C-terminal domain CLSA_c38370 PF00456 Transketolase, thiamine diphosphate binding domain CLSA_c38380 PF01261 Xylose isomerase-like TIM barrel CLSA_c38390 PF00596 Class II Aldolase and Adducin N-terminal domain CLSA_c38410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c38420 PF03611 CLSA_c38420 CLSA_c38430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLSA_c38440 PF12706 Beta-lactamase superfamily domain CLSA_c38460 PF00455 CLSA_c38460 CLSA_c38460 PF08220 DeoR-like helix-turn-helix domain CLSA_c38470 PF00753 Metallo-beta-lactamase superfamily CLSA_c38470 PF07521 RNA-metabolising metallo-beta-lactamase CLSA_c38480 PF01880 Desulfoferrodoxin CLSA_c38480 PF06397 Desulfoferrodoxin, N-terminal domain CLSA_c38500 PF00155 Aminotransferase class I and II CLSA_c38500 PF00392 Bacterial regulatory proteins, gntR family CLSA_c38510 PF00842 Alanine racemase, C-terminal domain CLSA_c38510 PF01168 Alanine racemase, N-terminal domain CLSA_c38520 PF02645 Uncharacterised protein, DegV family COG1307 CLSA_c38530 PF10672 S-adenosylmethionine-dependent methyltransferase CLSA_c38540 PF16285 CLSA_c38540 CLSA_c38550 PF00128 Alpha amylase, catalytic domain CLSA_c38550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLSA_c38550 PF11852 Domain of unknown function (DUF3372) CLSA_c38560 PF00128 Alpha amylase, catalytic domain CLSA_c38560 PF16657 CLSA_c38560 CLSA_c38570 PF06207 CLSA_c38570 CLSA_c38610 PF12146 Putative lysophospholipase CLSA_c38620 PF12822 Protein of unknown function (DUF3816) CLSA_c38630 PF01966 HD domain CLSA_c38650 PF00462 Glutaredoxin CLSA_c38650 PF03960 ArsC family CLSA_c38660 PF01048 Phosphorylase superfamily CLSA_c38670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLSA_c38680 PF02653 CLSA_c38680 CLSA_c38690 PF02653 CLSA_c38690 CLSA_c38700 PF00005 ABC transporter CLSA_c38710 PF02608 Basic membrane protein CLSA_c38720 PF00356 Bacterial regulatory proteins, lacI family CLSA_c38720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLSA_c38730 PF00155 Aminotransferase class I and II CLSA_c38740 PF01037 AsnC family CLSA_c38750 PF13451 CLSA_c38750 CLSA_c38760 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c38760 PF02861 Clp amino terminal domain CLSA_c38760 PF07724 AAA domain (Cdc48 subfamily) CLSA_c38760 PF10431 C-terminal, D2-small domain, of ClpB protein CLSA_c38770 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLSA_c38780 PF01276 Orn/Lys/Arg decarboxylase, major domain CLSA_c38780 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLSA_c38790 PF01212 Beta-eliminating lyase CLSA_c38800 PF00675 Insulinase (Peptidase family M16) CLSA_c38800 PF05193 Peptidase M16 inactive domain CLSA_c38810 PF04055 Radical SAM superfamily CLSA_c38810 PF13186 Iron-sulfur cluster-binding domain CLSA_c38810 PF13353 4Fe-4S single cluster domain CLSA_c38820 PF13165 CLSA_c38820 CLSA_c38830 PF00196 Bacterial regulatory proteins, luxR family CLSA_c38840 PF00183 Hsp90 protein CLSA_c38840 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c38850 PF00990 GGDEF domain CLSA_c38850 PF08448 PAS fold CLSA_c38850 PF13487 HD domain CLSA_c38860 PF02687 CLSA_c38860 CLSA_c38870 PF00005 ABC transporter CLSA_c38890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c38900 PF00072 Response regulator receiver domain CLSA_c38900 PF00486 Transcriptional regulatory protein, C terminal CLSA_c38910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c38910 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CLSA_c38920 PF00009 Elongation factor Tu GTP binding domain CLSA_c38930 PF01507 Phosphoadenosine phosphosulfate reductase family CLSA_c38940 PF13187 4Fe-4S dicluster domain CLSA_c38950 PF00890 FAD binding domain CLSA_c38960 PF00005 ABC transporter CLSA_c38970 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c38980 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c38990 PF13531 Bacterial extracellular solute-binding protein CLSA_c39000 PF12669 CLSA_c39000 CLSA_c39010 PF02421 Ferrous iron transport protein B CLSA_c39010 PF07664 CLSA_c39010 CLSA_c39010 PF07670 Nucleoside recognition CLSA_c39020 PF04023 FeoA domain CLSA_c39030 PF04023 FeoA domain CLSA_c39040 PF01522 Polysaccharide deacetylase CLSA_c39050 PF00579 tRNA synthetases class I (W and Y) CLSA_c39070 PF00582 Universal stress protein family CLSA_c39080 PF00817 impB/mucB/samB family CLSA_c39080 PF11799 impB/mucB/samB family C-terminal domain CLSA_c39090 PF13170 CLSA_c39090 CLSA_c39110 PF00122 E1-E2 ATPase CLSA_c39110 PF00689 Cation transporting ATPase, C-terminus CLSA_c39110 PF00690 Cation transporter/ATPase, N-terminus CLSA_c39110 PF00702 haloacid dehalogenase-like hydrolase CLSA_c39120 PF00571 CBS domain CLSA_c39120 PF01368 DHH family CLSA_c39120 PF02833 DHHA2 domain CLSA_c39120 PF07085 DRTGG domain CLSA_c39130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLSA_c39140 PF00460 Flagella basal body rod protein CLSA_c39140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLSA_c39170 PF04539 Sigma-70 region 3 CLSA_c39170 PF04542 Sigma-70 region 2 CLSA_c39170 PF04545 Sigma-70, region 4 CLSA_c39180 PF07238 PilZ domain CLSA_c39180 PF12945 Flagellar protein YcgR CLSA_c39190 PF13614 AAA domain CLSA_c39200 PF00448 SRP54-type protein, GTPase domain CLSA_c39210 PF00771 FHIPEP family CLSA_c39220 PF01311 CLSA_c39220 CLSA_c39220 PF01312 FlhB HrpN YscU SpaS Family CLSA_c39230 PF01313 CLSA_c39230 CLSA_c39240 PF00813 CLSA_c39240 CLSA_c39250 PF04347 CLSA_c39250 CLSA_c39260 PF03748 CLSA_c39260 CLSA_c39270 PF06289 CLSA_c39270 CLSA_c39280 PF00460 Flagella basal body rod protein CLSA_c39280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLSA_c39290 PF12611 CLSA_c39290 CLSA_c39300 PF03963 CLSA_c39300 CLSA_c39310 PF02120 Flagellar hook-length control protein FliK CLSA_c39320 PF02050 Flagellar FliJ protein CLSA_c39330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLSA_c39330 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLSA_c39340 PF02108 CLSA_c39340 CLSA_c39350 PF01706 FliG C-terminal domain CLSA_c39350 PF14841 FliG middle domain CLSA_c39350 PF14842 FliG N-terminal domain CLSA_c39360 PF01514 Secretory protein of YscJ/FliF family CLSA_c39360 PF08345 CLSA_c39360 CLSA_c39370 PF02049 CLSA_c39370 CLSA_c39380 PF00460 Flagella basal body rod protein CLSA_c39380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLSA_c39400 PF00350 Dynamin family CLSA_c39420 PF00350 Dynamin family CLSA_c39440 PF14070 CLSA_c39440 CLSA_c39450 PF00669 Bacterial flagellin N-terminal helical region CLSA_c39450 PF00700 Bacterial flagellin C-terminal helical region CLSA_c39460 PF16363 CLSA_c39460 CLSA_c39470 PF04101 Glycosyltransferase family 28 C-terminal domain CLSA_c39480 PF02719 Polysaccharide biosynthesis protein CLSA_c39490 PF00535 Glycosyl transferase family 2 CLSA_c39490 PF07719 Tetratricopeptide repeat CLSA_c39490 PF13176 Tetratricopeptide repeat CLSA_c39490 PF13181 Tetratricopeptide repeat CLSA_c39500 PF03102 NeuB family CLSA_c39500 PF08666 SAF domain CLSA_c39510 PF13302 Acetyltransferase (GNAT) domain CLSA_c39520 PF02348 Cytidylyltransferase CLSA_c39540 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c39540 PF14602 Hexapeptide repeat of succinyl-transferase CLSA_c39550 PF00117 Glutamine amidotransferase class-I CLSA_c39570 PF00977 Histidine biosynthesis protein CLSA_c39580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLSA_c39590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLSA_c39600 PF02348 Cytidylyltransferase CLSA_c39620 PF01973 CLSA_c39620 CLSA_c39630 PF00669 Bacterial flagellin N-terminal helical region CLSA_c39630 PF00700 Bacterial flagellin C-terminal helical region CLSA_c39640 PF05400 Flagellar protein FliT CLSA_c39650 PF02465 CLSA_c39650 CLSA_c39650 PF07195 CLSA_c39650 CLSA_c39660 PF02561 Flagellar protein FliS CLSA_c39680 PF03646 FlaG protein CLSA_c39690 PF02599 Global regulator protein family CLSA_c39700 PF02623 FliW protein CLSA_c39710 PF00669 Bacterial flagellin N-terminal helical region CLSA_c39710 PF00700 Bacterial flagellin C-terminal helical region CLSA_c39720 PF00460 Flagella basal body rod protein CLSA_c39720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLSA_c39730 PF05130 FlgN protein CLSA_c39740 PF04316 Anti-sigma-28 factor, FlgM CLSA_c39750 PF01052 Surface presentation of antigens (SPOA) CLSA_c39750 PF04509 CheC-like family CLSA_c39760 PF01052 Surface presentation of antigens (SPOA) CLSA_c39760 PF02154 Flagellar motor switch protein FliM CLSA_c39770 PF01584 CheW-like domain CLSA_c39780 PF00072 Response regulator receiver domain CLSA_c39790 PF04509 CheC-like family CLSA_c39800 PF01584 CheW-like domain CLSA_c39800 PF01627 Hpt domain CLSA_c39800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c39800 PF02895 Signal transducing histidine kinase, homodimeric domain CLSA_c39800 PF07194 P2 response regulator binding domain CLSA_c39810 PF01739 CheR methyltransferase, SAM binding domain CLSA_c39810 PF03705 CheR methyltransferase, all-alpha domain CLSA_c39820 PF00072 Response regulator receiver domain CLSA_c39820 PF01339 CheB methylesterase CLSA_c39830 PF03975 CheD chemotactic sensory transduction CLSA_c39840 PF01584 CheW-like domain CLSA_c39850 PF03961 CLSA_c39850 CLSA_c39860 PF01063 Aminotransferase class IV CLSA_c39870 PF12710 haloacid dehalogenase-like hydrolase CLSA_c39880 PF00155 Aminotransferase class I and II CLSA_c39890 PF06949 CLSA_c39890 CLSA_c39900 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLSA_c39900 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLSA_c39900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLSA_c39900 PF10371 Domain of unknown function CLSA_c39900 PF12838 4Fe-4S dicluster domain CLSA_c39900 PF17147 CLSA_c39900 CLSA_c39910 PF00258 Flavodoxin CLSA_c39920 PF03033 Glycosyltransferase family 28 N-terminal domain CLSA_c39920 PF04101 Glycosyltransferase family 28 C-terminal domain CLSA_c39930 PF01368 DHH family CLSA_c39930 PF02272 DHHA1 domain CLSA_c39940 PF01965 DJ-1/PfpI family CLSA_c39950 PF00521 DNA gyrase/topoisomerase IV, subunit A CLSA_c39950 PF03989 DNA gyrase C-terminal domain, beta-propeller CLSA_c39960 PF00204 DNA gyrase B CLSA_c39960 PF00986 DNA gyrase B subunit, carboxyl terminus CLSA_c39960 PF01751 Toprim domain CLSA_c39960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c39970 PF13641 Glycosyltransferase like family 2 CLSA_c39990 PF01694 Rhomboid family CLSA_c40000 PF01432 Peptidase family M3 CLSA_c40000 PF08439 Oligopeptidase F CLSA_c40030 PF00005 ABC transporter CLSA_c40040 PF00950 CLSA_c40040 CLSA_c40050 PF01475 Ferric uptake regulator family CLSA_c40060 PF02659 CLSA_c40060 CLSA_c40070 PF00365 Phosphofructokinase CLSA_c40080 PF00266 Aminotransferase class-V CLSA_c40100 PF00440 Bacterial regulatory proteins, tetR family CLSA_c40110 PF00005 ABC transporter CLSA_c40110 PF12848 ABC transporter CLSA_c40110 PF16326 CLSA_c40110 CLSA_c40120 PF00692 dUTPase CLSA_c40140 PF01522 Polysaccharide deacetylase CLSA_c40150 PF17099 CLSA_c40150 CLSA_c40160 PF00563 EAL domain CLSA_c40160 PF00990 GGDEF domain CLSA_c40170 PF14056 CLSA_c40170 CLSA_c40180 PF01171 PP-loop family CLSA_c40190 PF12822 Protein of unknown function (DUF3816) CLSA_c40200 PF03576 Peptidase family S58 CLSA_c40210 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLSA_c40220 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c40220 PF02861 Clp amino terminal domain CLSA_c40220 PF07724 AAA domain (Cdc48 subfamily) CLSA_c40220 PF10431 C-terminal, D2-small domain, of ClpB protein CLSA_c40230 PF12844 Helix-turn-helix domain CLSA_c40230 PF13181 Tetratricopeptide repeat CLSA_c40240 PF12844 Helix-turn-helix domain CLSA_c40260 PF01693 Caulimovirus viroplasmin CLSA_c40260 PF13456 Reverse transcriptase-like CLSA_c40270 PF06803 CLSA_c40270 CLSA_c40280 PF12800 4Fe-4S binding domain CLSA_c40280 PF13247 4Fe-4S dicluster domain CLSA_c40290 PF00384 Molybdopterin oxidoreductase CLSA_c40290 PF01568 Molydopterin dinucleotide binding domain CLSA_c40290 PF02613 Nitrate reductase delta subunit CLSA_c40290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLSA_c40310 PF03180 NLPA lipoprotein CLSA_c40320 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c40330 PF00005 ABC transporter CLSA_c40330 PF09383 NIL domain CLSA_c40340 PF01668 SmpB protein CLSA_c40350 PF00575 S1 RNA binding domain CLSA_c40350 PF00773 RNB domain CLSA_c40350 PF08206 Ribonuclease B OB domain CLSA_c40360 PF03840 Preprotein translocase SecG subunit CLSA_c40370 PF00113 Enolase, C-terminal TIM barrel domain CLSA_c40370 PF03952 Enolase, N-terminal domain CLSA_c40380 PF01473 Putative cell wall binding repeat CLSA_c40400 PF01676 Metalloenzyme superfamily CLSA_c40400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLSA_c40410 PF00121 Triosephosphate isomerase CLSA_c40420 PF00162 Phosphoglycerate kinase CLSA_c40430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLSA_c40430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLSA_c40440 PF04198 Putative sugar-binding domain CLSA_c40450 PF00309 CLSA_c40450 CLSA_c40450 PF04552 Sigma-54, DNA binding domain CLSA_c40450 PF04963 Sigma-54 factor, core binding domain CLSA_c40460 PF02645 Uncharacterised protein, DegV family COG1307 CLSA_c40470 PF00588 SpoU rRNA Methylase family CLSA_c40480 PF04294 CLSA_c40480 CLSA_c40480 PF07501 G5 domain CLSA_c40480 PF12229 Putative peptidoglycan binding domain CLSA_c40490 PF01183 Glycosyl hydrolases family 25 CLSA_c40500 PF01820 D-ala D-ala ligase N-terminus CLSA_c40500 PF07478 D-ala D-ala ligase C-terminus CLSA_c40520 PF00730 HhH-GPD superfamily base excision DNA repair protein CLSA_c40520 PF10576 Iron-sulfur binding domain of endonuclease III CLSA_c40530 PF01553 Acyltransferase CLSA_c40540 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c40550 PF00291 Pyridoxal-phosphate dependent enzyme CLSA_c40560 PF00571 CBS domain CLSA_c40560 PF03448 MgtE intracellular N domain CLSA_c40560 PF05239 PRC-barrel domain CLSA_c40570 PF04055 Radical SAM superfamily CLSA_c40570 PF08497 CLSA_c40570 CLSA_c40570 PF11842 CLSA_c40570 CLSA_c40580 PF15589 CLSA_c40580 CLSA_c40600 PF00781 Diacylglycerol kinase catalytic domain CLSA_c40610 PF01066 CDP-alcohol phosphatidyltransferase CLSA_c40640 PF02915 Rubrerythrin CLSA_c40650 PF04293 CLSA_c40650 CLSA_c40660 PF04285 CLSA_c40660 CLSA_c40670 PF06798 CLSA_c40670 CLSA_c40670 PF08298 PrkA AAA domain CLSA_c40680 PF07690 Major Facilitator Superfamily CLSA_c40690 PF13690 Chemotaxis phosphatase CheX CLSA_c40700 PF00072 Response regulator receiver domain CLSA_c40700 PF13690 Chemotaxis phosphatase CheX CLSA_c40710 PF03649 CLSA_c40710 CLSA_c40720 PF00005 ABC transporter CLSA_c40730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLSA_c40740 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLSA_c40740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLSA_c40750 PF00175 Oxidoreductase NAD-binding domain CLSA_c40750 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLSA_c40760 PF00107 Zinc-binding dehydrogenase CLSA_c40760 PF08240 Alcohol dehydrogenase GroES-like domain CLSA_c40770 PF00158 Sigma-54 interaction domain CLSA_c40770 PF02954 Bacterial regulatory protein, Fis family CLSA_c40780 PF03572 Peptidase family S41 CLSA_c40790 PF12730 CLSA_c40790 CLSA_c40800 PF12730 CLSA_c40800 CLSA_c40810 PF00005 ABC transporter CLSA_c40820 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c40820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c40830 PF00072 Response regulator receiver domain CLSA_c40830 PF00486 Transcriptional regulatory protein, C terminal CLSA_c40840 PF12729 CLSA_c40840 CLSA_c40850 PF00563 EAL domain CLSA_c40860 PF00589 Phage integrase family CLSA_c40880 PF01047 MarR family CLSA_c40890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLSA_c40890 PF02770 Acyl-CoA dehydrogenase, middle domain CLSA_c40890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLSA_c40900 PF01144 Coenzyme A transferase CLSA_c40910 PF00378 Enoyl-CoA hydratase/isomerase family CLSA_c40920 PF00133 tRNA synthetases class I (I, L, M and V) CLSA_c40920 PF08264 Anticodon-binding domain of tRNA CLSA_c40920 PF09334 tRNA synthetases class I (M) CLSA_c40920 PF13603 Leucyl-tRNA synthetase, Domain 2 CLSA_c40930 PF01473 Putative cell wall binding repeat CLSA_c40930 PF02368 Bacterial Ig-like domain (group 2) CLSA_c40930 PF07532 CLSA_c40930 CLSA_c40930 PF13306 Leucine rich repeats (6 copies) CLSA_c40940 PF00072 Response regulator receiver domain CLSA_c40940 PF00486 Transcriptional regulatory protein, C terminal CLSA_c40940 PF03704 Bacterial transcriptional activator domain CLSA_c40950 PF00512 His Kinase A (phospho-acceptor) domain CLSA_c40950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLSA_c40950 PF16927 CLSA_c40950 CLSA_c40960 PF00398 Ribosomal RNA adenine dimethylase CLSA_c40980 PF09967 CLSA_c40980 CLSA_c40980 PF13203 CLSA_c40980 CLSA_c40990 PF07728 AAA domain (dynein-related subfamily) CLSA_c41010 PF04607 Region found in RelA / SpoT proteins CLSA_c41020 PF09986 CLSA_c41020 CLSA_c41030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c41040 PF12784 CLSA_c41040 CLSA_c41050 PF07745 Glycosyl hydrolase family 53 CLSA_c41060 PF00294 pfkB family carbohydrate kinase CLSA_c41070 PF01116 Fructose-bisphosphate aldolase class-II CLSA_c41080 PF00232 Glycosyl hydrolase family 1 CLSA_c41090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLSA_c41090 PF02378 Phosphotransferase system, EIIC CLSA_c41100 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLSA_c41110 PF02502 Ribose/Galactose Isomerase CLSA_c41120 PF02502 Ribose/Galactose Isomerase CLSA_c41130 PF00455 CLSA_c41130 CLSA_c41130 PF08220 DeoR-like helix-turn-helix domain CLSA_c41140 PF00149 Calcineurin-like phosphoesterase CLSA_c41150 PF01312 FlhB HrpN YscU SpaS Family CLSA_c41170 PF00579 tRNA synthetases class I (W and Y) CLSA_c41170 PF01479 S4 domain CLSA_c41190 PF04326 Divergent AAA domain CLSA_c41200 PF00990 GGDEF domain CLSA_c41200 PF13492 GAF domain CLSA_c41210 PF07155 ECF-type riboflavin transporter, S component CLSA_c41220 PF00534 Glycosyl transferases group 1 CLSA_c41220 PF13477 Glycosyl transferase 4-like CLSA_c41230 PF00483 Nucleotidyl transferase CLSA_c41240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLSA_c41240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLSA_c41250 PF02397 CLSA_c41250 CLSA_c41260 PF13439 Glycosyltransferase Family 4 CLSA_c41260 PF13692 Glycosyl transferases group 1 CLSA_c41270 PF02350 UDP-N-acetylglucosamine 2-epimerase CLSA_c41280 PF04932 CLSA_c41280 CLSA_c41290 PF02719 Polysaccharide biosynthesis protein CLSA_c41290 PF13727 CoA-binding domain CLSA_c41300 PF00535 Glycosyl transferase family 2 CLSA_c41310 PF04991 CLSA_c41310 CLSA_c41320 PF00535 Glycosyl transferase family 2 CLSA_c41330 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c41340 PF13308 YARHG domain CLSA_c41350 PF13240 CLSA_c41350 CLSA_c41360 PF13240 CLSA_c41360 CLSA_c41370 PF01380 SIS domain CLSA_c41370 PF01418 Helix-turn-helix domain, rpiR family CLSA_c41390 PF04193 PQ loop repeat CLSA_c41400 PF00232 Glycosyl hydrolase family 1 CLSA_c41410 PF08282 haloacid dehalogenase-like hydrolase CLSA_c41420 PF00990 GGDEF domain CLSA_c41420 PF02743 Cache domain CLSA_c41420 PF08447 PAS fold CLSA_c41430 PF00892 EamA-like transporter family CLSA_c41440 PF01943 CLSA_c41440 CLSA_c41440 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c41450 PF00892 EamA-like transporter family CLSA_c41470 PF03358 NADPH-dependent FMN reductase CLSA_c41480 PF00483 Nucleotidyl transferase CLSA_c41490 PF01633 Choline/ethanolamine kinase CLSA_c41490 PF12804 MobA-like NTP transferase domain CLSA_c41490 PF13412 Winged helix-turn-helix DNA-binding CLSA_c41500 PF01473 Putative cell wall binding repeat CLSA_c41500 PF12733 CLSA_c41500 CLSA_c41520 PF01473 Putative cell wall binding repeat CLSA_c41520 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c41520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLSA_c41530 PF01473 Putative cell wall binding repeat CLSA_c41530 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c41530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLSA_c41540 PF01380 SIS domain CLSA_c41540 PF01418 Helix-turn-helix domain, rpiR family CLSA_c41550 PF01380 SIS domain CLSA_c41550 PF01418 Helix-turn-helix domain, rpiR family CLSA_c41560 PF00128 Alpha amylase, catalytic domain CLSA_c41560 PF16760 CLSA_c41560 CLSA_c41580 PF02056 Family 4 glycosyl hydrolase CLSA_c41580 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLSA_c41610 PF00367 phosphotransferase system, EIIB CLSA_c41610 PF02378 Phosphotransferase system, EIIC CLSA_c41620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLSA_c41640 PF00535 Glycosyl transferase family 2 CLSA_c41650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLSA_c41650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLSA_c41650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLSA_c41660 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c41680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLSA_c41690 PF01370 NAD dependent epimerase/dehydratase family CLSA_c41700 PF00534 Glycosyl transferases group 1 CLSA_c41720 PF00688 TGF-beta propeptide CLSA_c41740 PF00009 Elongation factor Tu GTP binding domain CLSA_c41740 PF03144 Elongation factor Tu domain 2 CLSA_c41740 PF16658 CLSA_c41740 CLSA_c41760 PF11823 CLSA_c41760 CLSA_c41790 PF14879 CLSA_c41790 CLSA_c41800 PF01593 Flavin containing amine oxidoreductase CLSA_c41810 PF00266 Aminotransferase class-V CLSA_c41840 PF03009 Glycerophosphoryl diester phosphodiesterase family CLSA_c41850 PF01473 Putative cell wall binding repeat CLSA_c41850 PF12733 CLSA_c41850 CLSA_c41860 PF01473 Putative cell wall binding repeat CLSA_c41860 PF02368 Bacterial Ig-like domain (group 2) CLSA_c41860 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CLSA_c41870 PF01473 Putative cell wall binding repeat CLSA_c41870 PF02368 Bacterial Ig-like domain (group 2) CLSA_c41870 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CLSA_c41880 PF01473 Putative cell wall binding repeat CLSA_c41880 PF12733 CLSA_c41880 CLSA_c41890 PF01473 Putative cell wall binding repeat CLSA_c41900 PF01934 Protein of unknown function DUF86 CLSA_c41910 PF01909 Nucleotidyltransferase domain CLSA_c41920 PF01473 Putative cell wall binding repeat CLSA_c41920 PF12733 CLSA_c41920 CLSA_c41930 PF01473 Putative cell wall binding repeat CLSA_c41930 PF12733 CLSA_c41930 CLSA_c41940 PF01473 Putative cell wall binding repeat CLSA_c41950 PF01473 Putative cell wall binding repeat CLSA_c41970 PF01473 Putative cell wall binding repeat CLSA_c41990 PF00535 Glycosyl transferase family 2 CLSA_c42000 PF14264 CLSA_c42000 CLSA_c42010 PF00535 Glycosyl transferase family 2 CLSA_c42020 PF13578 Methyltransferase domain CLSA_c42030 PF00005 ABC transporter CLSA_c42030 PF14524 Wzt C-terminal domain CLSA_c42040 PF01061 CLSA_c42040 CLSA_c42060 PF00535 Glycosyl transferase family 2 CLSA_c42070 PF02397 CLSA_c42070 CLSA_c42070 PF13727 CoA-binding domain CLSA_c42080 PF00534 Glycosyl transferases group 1 CLSA_c42080 PF13477 Glycosyl transferase 4-like CLSA_c42100 PF04932 CLSA_c42100 CLSA_c42110 PF01473 Putative cell wall binding repeat CLSA_c42110 PF12733 CLSA_c42110 CLSA_c42120 PF01473 Putative cell wall binding repeat CLSA_c42150 PF00005 ABC transporter CLSA_c42150 PF02687 CLSA_c42150 CLSA_c42150 PF12704 MacB-like periplasmic core domain CLSA_c42160 PF01473 Putative cell wall binding repeat CLSA_c42190 PF04892 CLSA_c42190 CLSA_c42200 PF08780 Nucleotidyltransferase substrate binding protein like CLSA_c42210 PF01909 Nucleotidyltransferase domain CLSA_c42220 PF00483 Nucleotidyl transferase CLSA_c42230 PF09681 CLSA_c42230 CLSA_c42240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLSA_c42240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLSA_c42240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLSA_c42240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLSA_c42250 PF16363 CLSA_c42250 CLSA_c42260 PF04321 RmlD substrate binding domain CLSA_c42270 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLSA_c42280 PF00483 Nucleotidyl transferase CLSA_c42290 PF04230 CLSA_c42290 CLSA_c42300 PF01943 CLSA_c42300 CLSA_c42300 PF14667 Polysaccharide biosynthesis C-terminal domain CLSA_c42310 PF13425 CLSA_c42310 CLSA_c42320 PF00534 Glycosyl transferases group 1 CLSA_c42330 PF00535 Glycosyl transferase family 2 CLSA_c42340 PF13439 Glycosyltransferase Family 4 CLSA_c42340 PF13692 Glycosyl transferases group 1 CLSA_c42350 PF03808 CLSA_c42350 CLSA_c42360 PF00483 Nucleotidyl transferase CLSA_c42370 PF02397 CLSA_c42370 CLSA_c42380 PF01473 Putative cell wall binding repeat CLSA_c42410 PF13614 AAA domain CLSA_c42420 PF02706 Chain length determinant protein CLSA_c42420 PF13807 CLSA_c42420 CLSA_c42430 PF01473 Putative cell wall binding repeat CLSA_c42440 PF01757 CLSA_c42440 CLSA_c42460 PF07907 CLSA_c42460 CLSA_c42470 PF00149 Calcineurin-like phosphoesterase CLSA_c42470 PF16656 CLSA_c42470 CLSA_c42480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c42480 PF12729 CLSA_c42480 CLSA_c42500 PF00753 Metallo-beta-lactamase superfamily CLSA_c42500 PF01473 Putative cell wall binding repeat CLSA_c42510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c42510 PF02743 Cache domain CLSA_c42520 PF08282 haloacid dehalogenase-like hydrolase CLSA_c42530 PF00455 CLSA_c42530 CLSA_c42530 PF08220 DeoR-like helix-turn-helix domain CLSA_c42540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c42540 PF00672 HAMP domain CLSA_c42540 PF02743 Cache domain CLSA_c42550 PF06165 Glycosyltransferase family 36 CLSA_c42550 PF10091 Putative glucoamylase CLSA_c42550 PF17167 CLSA_c42550 CLSA_c42560 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLSA_c42580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c42580 PF10114 CLSA_c42580 CLSA_c42590 PF00989 PAS fold CLSA_c42590 PF03704 Bacterial transcriptional activator domain CLSA_c42600 PF00701 Dihydrodipicolinate synthetase family CLSA_c42610 PF01545 Cation efflux family CLSA_c42610 PF16916 CLSA_c42610 CLSA_c42620 PF01431 Peptidase family M13 CLSA_c42620 PF05649 Peptidase family M13 CLSA_c42630 PF00005 ABC transporter CLSA_c42640 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c42650 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLSA_c42660 PF05057 Putative serine esterase (DUF676) CLSA_c42670 PF13245 Part of AAA domain CLSA_c42680 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c42680 PF01434 Peptidase family M41 CLSA_c42680 PF06480 FtsH Extracellular CLSA_c42690 PF11213 Protein of unknown function (DUF3006) CLSA_c42700 PF00717 Peptidase S24-like CLSA_c42710 PF00717 Peptidase S24-like CLSA_c42720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLSA_c42720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLSA_c42740 PF06541 CLSA_c42740 CLSA_c42750 PF01411 tRNA synthetases class II (A) CLSA_c42750 PF02272 DHHA1 domain CLSA_c42750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLSA_c42760 PF00872 CLSA_c42760 CLSA_c42770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c42770 PF17200 CLSA_c42770 CLSA_c42780 PF00403 Heavy-metal-associated domain CLSA_c42790 PF00122 E1-E2 ATPase CLSA_c42790 PF00403 Heavy-metal-associated domain CLSA_c42790 PF00702 haloacid dehalogenase-like hydrolase CLSA_c42800 PF02583 Metal-sensitive transcriptional repressor CLSA_c42810 PF00149 Calcineurin-like phosphoesterase CLSA_c42820 PF01546 Peptidase family M20/M25/M40 CLSA_c42820 PF07687 Peptidase dimerisation domain CLSA_c42840 PF02517 CAAX protease self-immunity CLSA_c42850 PF00795 Carbon-nitrogen hydrolase CLSA_c42860 PF01187 Macrophage migration inhibitory factor (MIF) CLSA_c42870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLSA_c42880 PF01594 CLSA_c42880 CLSA_c42890 PF01938 TRAM domain CLSA_c42890 PF05958 tRNA (Uracil-5-)-methyltransferase CLSA_c42900 PF00224 Pyruvate kinase, barrel domain CLSA_c42900 PF02887 Pyruvate kinase, alpha/beta domain CLSA_c42910 PF00365 Phosphofructokinase CLSA_c42920 PF02811 PHP domain CLSA_c42920 PF07733 Bacterial DNA polymerase III alpha subunit CLSA_c42920 PF14579 Helix-hairpin-helix motif CLSA_c42930 PF07876 Stress responsive A/B Barrel Domain CLSA_c42940 PF02650 WhiA C-terminal HTH domain CLSA_c42940 PF10298 WhiA N-terminal LAGLIDADG-like domain CLSA_c42940 PF14527 WhiA LAGLIDADG-like domain CLSA_c42950 PF01933 Uncharacterised protein family UPF0052 CLSA_c42960 PF03668 CLSA_c42960 CLSA_c42970 PF01565 FAD binding domain CLSA_c42970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLSA_c42990 PF01541 GIY-YIG catalytic domain CLSA_c42990 PF02151 UvrB/uvrC motif CLSA_c42990 PF08459 UvrC Helix-hairpin-helix N-terminal CLSA_c42990 PF12826 Helix-hairpin-helix motif CLSA_c43000 PF00905 Penicillin binding protein transpeptidase domain CLSA_c43010 PF01098 CLSA_c43010 CLSA_c43020 PF00498 FHA domain CLSA_c43030 PF00005 ABC transporter CLSA_c43040 PF00271 Helicase conserved C-terminal domain CLSA_c43040 PF02151 UvrB/uvrC motif CLSA_c43040 PF04851 Type III restriction enzyme, res subunit CLSA_c43040 PF12344 Ultra-violet resistance protein B CLSA_c43050 PF00324 Amino acid permease CLSA_c43070 PF03572 Peptidase family S41 CLSA_c43070 PF13180 PDZ domain CLSA_c43080 PF02687 CLSA_c43080 CLSA_c43090 PF00005 ABC transporter CLSA_c43100 PF02588 CLSA_c43100 CLSA_c43100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLSA_c43110 PF02779 Transketolase, pyrimidine binding domain CLSA_c43110 PF02780 Transketolase, C-terminal domain CLSA_c43120 PF00456 Transketolase, thiamine diphosphate binding domain CLSA_c43130 PF02452 PemK-like protein CLSA_c43170 PF01256 Carbohydrate kinase CLSA_c43170 PF03853 YjeF-related protein N-terminus CLSA_c43180 PF01648 4'-phosphopantetheinyl transferase superfamily CLSA_c43200 PF00436 Single-strand binding protein family CLSA_c43210 PF03631 CLSA_c43210 CLSA_c43220 PF00550 Phosphopantetheine attachment site CLSA_c43230 PF03062 CLSA_c43230 CLSA_c43240 PF00501 AMP-binding enzyme CLSA_c43240 PF13193 AMP-binding enzyme C-terminal domain CLSA_c43260 PF04914 DltD C-terminal region CLSA_c43270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLSA_c43270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLSA_c43270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLSA_c43280 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c43280 PF14602 Hexapeptide repeat of succinyl-transferase CLSA_c43290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLSA_c43300 PF06733 DEAD_2 CLSA_c43300 PF06777 CLSA_c43300 CLSA_c43300 PF13307 Helicase C-terminal domain CLSA_c43310 PF08876 CLSA_c43310 CLSA_c43320 PF04014 Antidote-toxin recognition MazE CLSA_c43330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLSA_c43340 PF05175 Methyltransferase small domain CLSA_c43350 PF00877 NlpC/P60 family CLSA_c43370 PF13419 Haloacid dehalogenase-like hydrolase CLSA_c43380 PF00872 CLSA_c43380 CLSA_c43390 PF13145 PPIC-type PPIASE domain CLSA_c43400 PF03167 Uracil DNA glycosylase superfamily CLSA_c43410 PF12653 CLSA_c43410 CLSA_c43440 PF02146 Sir2 family CLSA_c43470 PF00994 Probable molybdopterin binding domain CLSA_c43470 PF02464 Competence-damaged protein CLSA_c43480 PF00480 ROK family CLSA_c43500 PF13518 Helix-turn-helix domain CLSA_c43510 PF00665 Integrase core domain CLSA_c43520 PF00009 Elongation factor Tu GTP binding domain CLSA_c43520 PF00679 Elongation factor G C-terminus CLSA_c43520 PF03764 Elongation factor G, domain IV CLSA_c43520 PF14492 Elongation Factor G, domain II CLSA_c43540 PF00884 Sulfatase CLSA_c43550 PF04892 CLSA_c43550 CLSA_c43640 PF01965 DJ-1/PfpI family CLSA_c43680 PF03618 CLSA_c43680 CLSA_c43690 PF01252 CLSA_c43690 CLSA_c43720 PF00056 lactate/malate dehydrogenase, NAD binding domain CLSA_c43720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLSA_c43770 PF00483 Nucleotidyl transferase CLSA_c43780 PF00132 Bacterial transferase hexapeptide (six repeats) CLSA_c43780 PF00483 Nucleotidyl transferase CLSA_c43790 PF00128 Alpha amylase, catalytic domain CLSA_c43800 PF00343 Carbohydrate phosphorylase CLSA_c43810 PF00534 Glycosyl transferases group 1 CLSA_c43810 PF08323 Starch synthase catalytic domain CLSA_c43820 PF00128 Alpha amylase, catalytic domain CLSA_c43820 PF02806 Alpha amylase, C-terminal all-beta domain CLSA_c43820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLSA_c43870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLSA_c43880 PF00367 phosphotransferase system, EIIB CLSA_c43880 PF02378 Phosphotransferase system, EIIC CLSA_c43890 PF00874 PRD domain CLSA_c43890 PF03123 CAT RNA binding domain CLSA_c43900 PF13302 Acetyltransferase (GNAT) domain CLSA_c43910 PF00899 ThiF family CLSA_c43920 PF04055 Radical SAM superfamily CLSA_c43920 PF06968 Biotin and Thiamin Synthesis associated domain CLSA_c43930 PF01048 Phosphorylase superfamily CLSA_c43940 PF00881 Nitroreductase family CLSA_c43940 PF13187 4Fe-4S dicluster domain CLSA_c43950 PF00440 Bacterial regulatory proteins, tetR family CLSA_c43960 PF06245 CLSA_c43960 CLSA_c43970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLSA_c43970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLSA_c43980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLSA_c43990 PF00005 ABC transporter CLSA_c43990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLSA_c44000 PF00005 ABC transporter CLSA_c44000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLSA_c44010 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c44010 PF12911 CLSA_c44010 CLSA_c44020 PF00528 Binding-protein-dependent transport system inner membrane component CLSA_c44040 PF01431 Peptidase family M13 CLSA_c44040 PF05649 Peptidase family M13 CLSA_c44050 PF01473 Putative cell wall binding repeat CLSA_c44050 PF05257 CHAP domain CLSA_c44050 PF08239 Bacterial SH3 domain CLSA_c44060 PF07441 CLSA_c44060 CLSA_c44070 PF10704 CLSA_c44070 CLSA_c44080 PF02132 RecR protein CLSA_c44080 PF13662 Toprim domain CLSA_c44090 PF02575 YbaB/EbfC DNA-binding family CLSA_c44100 PF12169 DNA polymerase III subunits gamma and tau domain III CLSA_c44100 PF13177 DNA polymerase III, delta subunit CLSA_c44120 PF00303 Thymidylate synthase CLSA_c44130 PF00186 Dihydrofolate reductase CLSA_c44140 PF01638 HxlR-like helix-turn-helix CLSA_c44150 PF01243 Pyridoxamine 5'-phosphate oxidase CLSA_c44180 PF01566 CLSA_c44180 CLSA_c44190 PF00571 CBS domain CLSA_c44190 PF03448 MgtE intracellular N domain CLSA_c44190 PF05239 PRC-barrel domain CLSA_c44200 PF01098 CLSA_c44200 CLSA_c44210 PF02353 Mycolic acid cyclopropane synthetase CLSA_c44240 PF14437 CLSA_c44240 CLSA_c44250 PF00571 CBS domain CLSA_c44250 PF01595 CLSA_c44250 CLSA_c44250 PF03471 Transporter associated domain CLSA_c44270 PF00294 pfkB family carbohydrate kinase CLSA_c44280 PF00251 Glycosyl hydrolases family 32 N-terminal domain CLSA_c44280 PF08244 Glycosyl hydrolases family 32 C terminal CLSA_c44290 PF00356 Bacterial regulatory proteins, lacI family CLSA_c44290 PF13377 Periplasmic binding protein-like domain CLSA_c44300 PF00367 phosphotransferase system, EIIB CLSA_c44300 PF02378 Phosphotransferase system, EIIC CLSA_c44310 PF01381 Helix-turn-helix CLSA_c44320 PF00005 ABC transporter CLSA_c44320 PF00664 ABC transporter transmembrane region CLSA_c44330 PF00005 ABC transporter CLSA_c44330 PF00664 ABC transporter transmembrane region CLSA_c44340 PF12802 MarR family CLSA_c44350 PF07690 Major Facilitator Superfamily CLSA_c44370 PF06406 StbA protein CLSA_c44380 PF08681 Protein of unknown function (DUF1778) CLSA_c44400 PF02016 LD-carboxypeptidase CLSA_c44410 PF13751 CLSA_c44410 CLSA_c44430 PF00072 Response regulator receiver domain CLSA_c44430 PF04397 LytTr DNA-binding domain CLSA_c44440 PF14501 GHKL domain CLSA_c44460 PF04647 CLSA_c44460 CLSA_c44480 PF00005 ABC transporter CLSA_c44480 PF00664 ABC transporter transmembrane region CLSA_c44480 PF03412 Peptidase C39 family CLSA_c44490 PF13346 CLSA_c44490 CLSA_c44510 PF00005 ABC transporter CLSA_c44520 PF03358 NADPH-dependent FMN reductase CLSA_c44530 PF05147 Lanthionine synthetase C-like protein CLSA_c44530 PF13575 CLSA_c44530 CLSA_c44560 PF01609 Transposase DDE domain CLSA_c44570 PF13276 CLSA_c44570 CLSA_c44580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLSA_c44580 PF08388 CLSA_c44580 CLSA_c44580 PF13655 CLSA_c44580 CLSA_c44620 PF01471 Putative peptidoglycan binding domain CLSA_c44640 PF00122 E1-E2 ATPase CLSA_c44640 PF00702 haloacid dehalogenase-like hydrolase CLSA_c44650 PF01553 Acyltransferase CLSA_c44660 PF00270 DEAD/DEAH box helicase CLSA_c44660 PF00271 Helicase conserved C-terminal domain CLSA_c44660 PF03880 DbpA RNA binding domain CLSA_c44670 PF00011 Hsp20/alpha crystallin family CLSA_c44680 PF00158 Sigma-54 interaction domain CLSA_c44680 PF00874 PRD domain CLSA_c44680 PF03610 PTS system fructose IIA component CLSA_c44690 PF03610 PTS system fructose IIA component CLSA_c44700 PF03830 PTS system sorbose subfamily IIB component CLSA_c44710 PF01966 HD domain CLSA_c44720 PF00543 Nitrogen regulatory protein P-II CLSA_c44730 PF00909 Ammonium Transporter Family CLSA_c44740 PF01636 Phosphotransferase enzyme family CLSA_c44750 PF07561 CLSA_c44750 CLSA_c44760 PF00916 CLSA_c44760 CLSA_c44760 PF01740 STAS domain CLSA_c44780 PF00701 Dihydrodipicolinate synthetase family CLSA_c44800 PF01925 CLSA_c44800 CLSA_c44900 PF01174 SNO glutamine amidotransferase family CLSA_c44910 PF01680 SOR/SNZ family CLSA_c44920 PF01170 Putative RNA methylase family UPF0020 CLSA_c44930 PF01171 PP-loop family CLSA_c44980 PF05066 HB1, ASXL, restriction endonuclease HTH domain CLSA_c44990 PF01520 N-acetylmuramoyl-L-alanine amidase CLSA_c45040 PF03235 CLSA_c45040 CLSA_c45040 PF07510 CLSA_c45040 CLSA_c45050 PF02590 Predicted SPOUT methyltransferase CLSA_c45060 PF07690 Major Facilitator Superfamily CLSA_c45070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLSA_c45080 PF02810 SEC-C motif CLSA_c45090 PF00753 Metallo-beta-lactamase superfamily CLSA_c45100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLSA_c45120 PF08761 dUTPase CLSA_c45130 PF04657 CLSA_c45130 CLSA_c45140 PF12706 Beta-lactamase superfamily domain CLSA_c45150 PF00082 Subtilase family CLSA_c45160 PF07261 Replication initiation and membrane attachment CLSA_c45170 PF01695 IstB-like ATP binding protein CLSA_c45220 PF03486 HI0933-like protein CLSA_c45230 PF01643 Acyl-ACP thioesterase CLSA_c45240 PF08984 Domain of unknown function (DUF1858) CLSA_c45250 PF00709 Adenylosuccinate synthetase CLSA_c45260 PF03807 NADP oxidoreductase coenzyme F420-dependent CLSA_c45260 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLSA_c45270 PF00772 DnaB-like helicase N terminal domain CLSA_c45270 PF03796 DnaB-like helicase C terminal domain CLSA_c45280 PF00004 ATPase family associated with various cellular activities (AAA) CLSA_c45280 PF05362 Lon protease (S16) C-terminal proteolytic domain CLSA_c45290 PF01281 Ribosomal protein L9, N-terminal domain CLSA_c45290 PF03948 Ribosomal protein L9, C-terminal domain CLSA_c45300 PF01368 DHH family CLSA_c45300 PF02272 DHHA1 domain CLSA_c45310 PF12643 CLSA_c45310 CLSA_c45320 PF01084 Ribosomal protein S18 CLSA_c45330 PF00436 Single-strand binding protein family CLSA_c45340 PF01250 Ribosomal protein S6 CLSA_c45350 PF06107 CLSA_c45350 CLSA_c45360 PF00924 Mechanosensitive ion channel CLSA_c45370 PF11823 CLSA_c45370 CLSA_c45380 PF01810 CLSA_c45380 CLSA_c45390 PF00266 Aminotransferase class-V CLSA_c45400 PF06866 CLSA_c45400 CLSA_c45410 PF14584 CLSA_c45410 CLSA_c45420 PF02195 ParB-like nuclease domain CLSA_c45430 PF13614 AAA domain CLSA_c45440 PF02195 ParB-like nuclease domain CLSA_c45450 PF02527 rRNA small subunit methyltransferase G CLSA_c45460 PF01134 Glucose inhibited division protein A CLSA_c45460 PF13932 GidA associated domain 3 CLSA_c45470 PF01926 50S ribosome-binding GTPase CLSA_c45470 PF10396 GTP-binding protein TrmE N-terminus CLSA_c45470 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CLSA_c45480 PF01424 R3H domain CLSA_c45480 PF13083 KH domain CLSA_c45480 PF14804 Jag N-terminus CLSA_c45490 PF02096 60Kd inner membrane protein CLSA_c45500 PF01809 CLSA_c45500 CLSA_c45510 PF00825 Ribonuclease P CLSA_c45520 PF00468 Ribosomal protein L34