CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Pfam PF14492 Elongation Factor G, domain II 400 472 1.3E-22 T 12-10-2018 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Pfam PF00679 Elongation factor G C-terminus 597 681 3.9E-29 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 687 7.5E-213 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 3.7E-41 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 178 8.5E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SMART SM00838 597 684 1.2E-40 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SUPERFAMILY SSF54980 597 687 7.19E-27 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SUPERFAMILY SSF54980 398 475 7.91E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SUPERFAMILY SSF54211 478 596 1.11E-40 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Gene3D G3DSA:3.30.70.240 601 671 5.0E-86 T 12-10-2018 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Gene3D G3DSA:3.40.50.300 1 288 8.4E-77 T 12-10-2018 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SUPERFAMILY SSF50447 263 400 4.89E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Gene3D G3DSA:3.30.230.10 480 681 5.0E-86 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SUPERFAMILY SSF52540 4 278 2.86E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 SMART SM00889 476 595 1.5E-63 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Pfam PF03764 Elongation factor G, domain IV 475 595 1.9E-39 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Gene3D G3DSA:3.30.70.870 402 479 2.4E-20 T 12-10-2018 CLSA_c43520 f2304678335c1b2604e1e1ca347625fd 693 Gene3D G3DSA:2.40.30.10 289 401 5.0E-33 T 12-10-2018 CLSA_c39910 d9ff9b6409a792622dff5cc3ab4b11d7 143 Gene3D G3DSA:3.40.50.360 4 143 2.5E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c39910 d9ff9b6409a792622dff5cc3ab4b11d7 143 Pfam PF00258 Flavodoxin 6 130 1.8E-8 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c39910 d9ff9b6409a792622dff5cc3ab4b11d7 143 SUPERFAMILY SSF52218 3 143 1.57E-29 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 Pfam PF08022 FAD-binding domain 205 281 2.1E-10 T 12-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 PRINTS PR00409 Phthalate dioxygenase reductase family signature 306 325 1.1E-6 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 PRINTS PR00409 Phthalate dioxygenase reductase family signature 284 298 1.1E-6 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 PRINTS PR00409 Phthalate dioxygenase reductase family signature 386 394 1.1E-6 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 SUPERFAMILY SSF63380 201 296 1.36E-15 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 Gene3D G3DSA:3.40.50.80 298 421 1.7E-19 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 SUPERFAMILY SSF52343 285 416 1.96E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 Pfam PF01794 Ferric reductase like transmembrane component 43 155 1.4E-13 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 Gene3D G3DSA:2.40.30.10 195 294 3.1E-15 T 12-10-2018 CLSA_c38200 98b1165e3575f0dbef8f6034dd209dac 421 Pfam PF00175 Oxidoreductase NAD-binding domain 308 400 9.2E-9 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c15410 4ab3083a80fb00aa70b3fbbc97e698c3 363 Gene3D G3DSA:1.10.8.60 286 356 1.6E-17 T 12-10-2018 CLSA_c15410 4ab3083a80fb00aa70b3fbbc97e698c3 363 SUPERFAMILY SSF52540 109 354 1.67E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15410 4ab3083a80fb00aa70b3fbbc97e698c3 363 Gene3D G3DSA:3.40.50.300 97 285 1.4E-31 T 12-10-2018 CLSA_c15410 4ab3083a80fb00aa70b3fbbc97e698c3 363 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 159 282 1.9E-20 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c15410 4ab3083a80fb00aa70b3fbbc97e698c3 363 SMART SM00382 153 286 2.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c17080 57fbe54bf49f4b7cc72636ada4dcdf12 413 Pfam PF01566 Natural resistance-associated macrophage protein 34 385 5.1E-109 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c17080 57fbe54bf49f4b7cc72636ada4dcdf12 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 296 315 1.7E-24 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c17080 57fbe54bf49f4b7cc72636ada4dcdf12 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 93 119 1.7E-24 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c17080 57fbe54bf49f4b7cc72636ada4dcdf12 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 193 216 1.7E-24 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c17080 57fbe54bf49f4b7cc72636ada4dcdf12 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 374 1.7E-24 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c17080 57fbe54bf49f4b7cc72636ada4dcdf12 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 121 140 1.7E-24 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c03910 f9a34a8f64d56237d63d709a504bdbf3 159 Gene3D G3DSA:3.60.21.10 1 159 1.2E-39 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c03910 f9a34a8f64d56237d63d709a504bdbf3 159 SUPERFAMILY SSF56300 1 148 6.81E-38 T 12-10-2018 CLSA_c03910 f9a34a8f64d56237d63d709a504bdbf3 159 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 103 127 - T 12-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site CLSA_c03910 f9a34a8f64d56237d63d709a504bdbf3 159 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 146 1.1E-27 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CLSA_c03910 f9a34a8f64d56237d63d709a504bdbf3 159 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 146 7.1E-33 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 Gene3D G3DSA:3.50.50.60 8 405 6.1E-121 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 SUPERFAMILY SSF51905 3 412 4.99E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 Gene3D G3DSA:1.10.8.260 274 339 6.1E-121 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 409 5.7E-130 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 SUPERFAMILY SSF160996 194 357 8.76E-39 T 12-10-2018 CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.0E-5 T 12-10-2018 CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 1.0E-5 T 12-10-2018 CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 Gene3D G3DSA:2.40.30.10 193 356 6.1E-121 T 12-10-2018 CLSA_c45220 facc3595cb1824c14be2020cb49928bf 414 Pfam PF03486 HI0933-like protein 5 409 3.4E-121 T 12-10-2018 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 Pfam PF13377 Periplasmic binding protein-like domain 165 331 6.9E-43 T 12-10-2018 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 SUPERFAMILY SSF53822 74 332 2.55E-54 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 Gene3D G3DSA:3.40.50.2300 156 324 9.7E-57 T 12-10-2018 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 Gene3D G3DSA:3.40.50.2300 75 323 9.7E-57 T 12-10-2018 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 SUPERFAMILY SSF47413 3 50 7.31E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 Gene3D G3DSA:1.10.260.40 1 47 3.5E-15 T 12-10-2018 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.4E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c32350 edef14a53d6e6dcf02295fb0e1617c4a 334 SMART SM00354 1 72 7.6E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 Gene3D G3DSA:3.30.70.270 238 400 7.8E-40 T 12-10-2018 CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 Pfam PF08448 PAS fold 139 241 3.6E-7 T 12-10-2018 IPR013656 PAS fold-4 CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 Gene3D G3DSA:3.30.450.20 122 237 4.5E-14 T 12-10-2018 CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 SUPERFAMILY SSF109604 422 579 1.38E-36 T 12-10-2018 CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 SUPERFAMILY SSF55073 255 400 2.51E-33 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 Pfam PF01966 HD domain 422 541 8.1E-23 T 12-10-2018 IPR006674 HD domain CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 Gene3D G3DSA:1.10.3210.10 401 584 7.7E-68 T 12-10-2018 CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 246 3.8E-8 T 12-10-2018 IPR000014 PAS domain CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 395 1.4E-35 T 12-10-2018 IPR000160 GGDEF domain CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 SMART SM00091 131 197 0.0079 T 12-10-2018 IPR000014 PAS domain CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 SUPERFAMILY SSF55785 119 237 7.04E-12 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 394 1.8E-34 T 12-10-2018 IPR000160 GGDEF domain CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 SMART SM00471 416 551 1.2E-11 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c24630 63cbd022d8e4ba1ff07db34d872a4c43 585 SMART SM00267 239 402 4.7E-35 T 12-10-2018 IPR000160 GGDEF domain CLSA_c37920 5ae698fde87f7f06ac97df5c467e794c 139 TIGRFAM TIGR01753 flav_short: flavodoxin 2 136 1.3E-44 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 CLSA_c37920 5ae698fde87f7f06ac97df5c467e794c 139 Gene3D G3DSA:3.40.50.360 1 139 4.6E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c37920 5ae698fde87f7f06ac97df5c467e794c 139 Pfam PF00258 Flavodoxin 3 130 1.6E-18 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c37920 5ae698fde87f7f06ac97df5c467e794c 139 SUPERFAMILY SSF52218 3 138 2.48E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c37920 5ae698fde87f7f06ac97df5c467e794c 139 ProSitePatterns PS00201 Flavodoxin signature. 3 19 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 SMART SM00637 520 621 2.9E-40 T 12-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 439 504 6.7E-21 T 12-10-2018 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 352 416 7.7E-20 T 12-10-2018 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 SUPERFAMILY SSF49384 520 621 2.79E-28 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 Gene3D G3DSA:3.20.20.80 39 337 1.2E-103 T 12-10-2018 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 Gene3D G3DSA:2.60.40.290 518 624 1.1E-30 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 Pfam PF00553 Cellulose binding domain 521 621 4.8E-29 T 12-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 SUPERFAMILY SSF51445 20 342 7.88E-93 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 168 177 - T 12-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 CLSA_c09900 d91a6326955d7d2bdbceded56efee1e2 624 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 55 303 3.7E-66 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CLSA_c28470 c1b99242cd05012a77ff3f61c340f219 352 Gene3D G3DSA:3.90.25.10 202 329 2.7E-128 T 12-10-2018 CLSA_c28470 c1b99242cd05012a77ff3f61c340f219 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 322 1.5E-96 T 12-10-2018 IPR016040 NAD(P)-binding domain CLSA_c28470 c1b99242cd05012a77ff3f61c340f219 352 SUPERFAMILY SSF51735 2 348 1.22E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c28470 c1b99242cd05012a77ff3f61c340f219 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 336 2.1E-145 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CLSA_c28470 c1b99242cd05012a77ff3f61c340f219 352 Gene3D G3DSA:3.40.50.720 5 321 2.7E-128 T 12-10-2018 CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 2.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 Gene3D G3DSA:1.10.10.10 3 147 1.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 SUPERFAMILY SSF46785 30 146 4.97E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 SMART SM00347 31 131 7.2E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37680 725669dc7531b50cee0a7ed3081ace41 149 Pfam PF01047 MarR family 38 95 1.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c34300 eaec6bf7a372ecb9cac16c6ff28e8459 37 Gene3D G3DSA:1.10.260.40 2 36 1.2E-6 T 12-10-2018 CLSA_c38320 7fe96a051196cffdd41c176e74250321 387 Gene3D G3DSA:2.160.20.10 22 387 3.7E-48 T 12-10-2018 IPR012334 Pectin lyase fold CLSA_c38320 7fe96a051196cffdd41c176e74250321 387 SMART SM00656 47 324 1.2E-5 T 12-10-2018 IPR002022 Pectate lyase CLSA_c38320 7fe96a051196cffdd41c176e74250321 387 SUPERFAMILY SSF51126 47 386 1.22E-38 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c01000 780747467b14e62755fa903862ff7e09 464 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 7 464 46.246 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 Gene3D G3DSA:2.40.50.140 2 106 1.6E-17 T 12-10-2018 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 SUPERFAMILY SSF50249 13 103 8.57E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c01000 780747467b14e62755fa903862ff7e09 464 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 458 1.6E-87 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 7 464 3.9E-193 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 Pfam PF01336 OB-fold nucleic acid binding domain 22 98 1.5E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 Gene3D G3DSA:3.30.930.10 107 462 7.3E-116 T 12-10-2018 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 SUPERFAMILY SSF55681 103 460 1.85E-100 T 12-10-2018 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 222 235 9.6E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 379 395 9.6E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 419 433 9.6E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01000 780747467b14e62755fa903862ff7e09 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 218 9.6E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 Pfam PF02378 Phosphotransferase system, EIIC 41 380 2.3E-92 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 593 712 8.3E-43 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 593 713 1.6E-48 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 Pfam PF00367 phosphotransferase system, EIIB 488 519 1.9E-11 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 SUPERFAMILY SSF51261 586 736 2.62E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 Gene3D G3DSA:2.70.70.10 580 739 1.1E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 SUPERFAMILY SSF55604 485 556 1.31E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 Gene3D G3DSA:3.30.1360.60 480 559 8.4E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 441 543 3.9E-19 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLSA_c10070 2885e00085c6d4910c48eed3af730bb6 741 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 655 667 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c38710 3ad4dad8d6ab0a4e1366c14abcbb9606 369 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 38 358 5.3E-64 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CLSA_c38710 3ad4dad8d6ab0a4e1366c14abcbb9606 369 Gene3D G3DSA:3.40.50.2300 41 323 2.1E-96 T 12-10-2018 CLSA_c38710 3ad4dad8d6ab0a4e1366c14abcbb9606 369 Gene3D G3DSA:3.40.50.2300 153 356 2.1E-96 T 12-10-2018 CLSA_c38710 3ad4dad8d6ab0a4e1366c14abcbb9606 369 SUPERFAMILY SSF53822 38 285 1.52E-10 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c13080 5d2208f40f2e03cb6e4991b48edf8fce 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 323 68.59 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c13080 5d2208f40f2e03cb6e4991b48edf8fce 323 Gene3D G3DSA:3.40.47.10 1 323 3.2E-127 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c13080 5d2208f40f2e03cb6e4991b48edf8fce 323 SUPERFAMILY SSF53901 2 323 1.87E-61 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c13080 5d2208f40f2e03cb6e4991b48edf8fce 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 323 4.9E-117 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c13080 5d2208f40f2e03cb6e4991b48edf8fce 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 323 4.8E-31 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c13080 5d2208f40f2e03cb6e4991b48edf8fce 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.0E-30 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 Gene3D G3DSA:3.40.50.300 289 560 5.7E-111 T 12-10-2018 CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 12-10-2018 IPR001482 Type II/IV secretion system protein CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 SMART SM00382 313 436 6.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 SUPERFAMILY SSF160246 4 142 5.49E-37 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 Gene3D G3DSA:3.30.300.160 65 143 2.2E-9 T 12-10-2018 CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 146 1.2E-16 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 Gene3D G3DSA:3.30.450.90 146 285 1.2E-42 T 12-10-2018 CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 Pfam PF00437 Type II/IV secretion system protein 192 452 1.5E-80 T 12-10-2018 IPR001482 Type II/IV secretion system protein CLSA_c11480 36ccc7df62ae4fb0ac2e011476c8d5a2 562 SUPERFAMILY SSF52540 173 554 2.15E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 SUPERFAMILY SSF52540 6 232 6.16E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 Gene3D G3DSA:3.40.50.300 262 497 3.1E-48 T 12-10-2018 CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 SMART SM00382 282 477 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 SMART SM00382 32 221 2.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 Gene3D G3DSA:3.40.50.300 2 243 4.3E-54 T 12-10-2018 CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 Pfam PF00005 ABC transporter 273 428 5.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 SUPERFAMILY SSF52540 245 488 3.46E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15890 cdf6752d0776ce4041954797ff4be688 499 Pfam PF00005 ABC transporter 23 173 9.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c31980 0509e73c64657f89a22264813416eb8d 356 Gene3D G3DSA:3.90.1150.10 24 350 8.9E-121 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c31980 0509e73c64657f89a22264813416eb8d 356 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 350 1.3E-93 T 12-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CLSA_c31980 0509e73c64657f89a22264813416eb8d 356 SUPERFAMILY SSF53383 5 352 2.56E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c31980 0509e73c64657f89a22264813416eb8d 356 Pfam PF00155 Aminotransferase class I and II 23 350 4.1E-45 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c31980 0509e73c64657f89a22264813416eb8d 356 Gene3D G3DSA:3.40.640.10 36 260 8.9E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c31980 0509e73c64657f89a22264813416eb8d 356 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 211 224 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 Pfam PF13533 Biotin-lipoyl like 75 120 1.4E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 Gene3D G3DSA:1.10.287.470 105 224 4.8E-64 T 12-10-2018 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 Gene3D G3DSA:2.40.30.170 63 334 4.8E-64 T 12-10-2018 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 Gene3D G3DSA:2.40.50.100 71 258 4.8E-64 T 12-10-2018 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 191 407 7.4E-48 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 185 326 1.7E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 Gene3D G3DSA:2.40.420.20 335 392 4.8E-64 T 12-10-2018 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 SUPERFAMILY SSF111369 63 148 6.67E-6 T 12-10-2018 CLSA_c37550 c855e5c52b35a28081b7481e6b864cfc 445 SUPERFAMILY SSF111369 195 331 1.19E-17 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 188 1.6E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 439 453 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 73 86 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 543 555 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 287 300 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 587 603 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 38 53 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 116 130 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 505 521 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR00418 DNA topoisomerase II family signature 523 540 2.4E-67 T 12-10-2018 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 ProSitePatterns PS00177 DNA topoisomerase II signature. 441 449 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Gene3D G3DSA:3.30.565.10 20 237 5.9E-84 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c39960 6159020532619c34a7b6befdf51af673 649 SMART SM00433 38 648 3.1E-264 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 235 257 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 331 347 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 489 498 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 194 209 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 379 393 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 608 620 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 9 19 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 624 640 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 393 413 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 PRINTS PR01159 DNA gyrase subunit B signature 209 222 5.4E-46 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Gene3D G3DSA:3.30.230.10 238 417 2.2E-58 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c39960 6159020532619c34a7b6befdf51af673 649 SUPERFAMILY SSF54211 236 407 3.6E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c39960 6159020532619c34a7b6befdf51af673 649 SUPERFAMILY SSF56719 418 646 3.4E-72 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 584 643 1.0E-27 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 SUPERFAMILY SSF55874 10 231 3.67E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Gene3D G3DSA:3.40.50.670 425 649 3.5E-86 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Pfam PF01751 Toprim domain 439 548 3.0E-17 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c39960 6159020532619c34a7b6befdf51af673 649 Pfam PF00204 DNA gyrase B 236 408 2.4E-54 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c39960 6159020532619c34a7b6befdf51af673 649 SMART SM00387 34 189 1.1E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c37510 1ecc7839ceba05d22674e91f39972930 401 SUPERFAMILY SSF103473 13 383 1.11E-54 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c37510 1ecc7839ceba05d22674e91f39972930 401 Gene3D G3DSA:1.20.1250.20 10 383 3.0E-44 T 12-10-2018 CLSA_c37510 1ecc7839ceba05d22674e91f39972930 401 Pfam PF07690 Major Facilitator Superfamily 21 270 6.1E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SUPERFAMILY SSF55785 278 399 8.38E-17 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00387 790 902 7.3E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SUPERFAMILY SSF55785 523 647 2.44E-17 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Pfam PF13426 PAS domain 309 400 1.0E-10 T 12-10-2018 IPR000014 PAS domain CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Gene3D G3DSA:1.10.287.130 671 745 4.0E-9 T 12-10-2018 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Gene3D G3DSA:3.30.450.20 535 664 4.4E-23 T 12-10-2018 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00091 538 606 4.0E-7 T 12-10-2018 IPR000014 PAS domain CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00091 290 358 4.1E-4 T 12-10-2018 IPR000014 PAS domain CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00091 417 487 93.0 T 12-10-2018 IPR000014 PAS domain CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SUPERFAMILY SSF55874 750 900 3.14E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Pfam PF08448 PAS fold 544 650 3.5E-6 T 12-10-2018 IPR013656 PAS fold-4 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Gene3D G3DSA:3.30.450.20 277 423 4.3E-19 T 12-10-2018 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Gene3D G3DSA:3.30.565.10 750 903 2.4E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 843 5.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 886 899 5.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 PRINTS PR00344 Bacterial sensor protein C-terminal signature 862 880 5.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SUPERFAMILY SSF47384 666 743 4.9E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00388 680 748 2.4E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00086 360 401 0.05 T 12-10-2018 IPR001610 PAC motif CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 SMART SM00086 609 649 52.0 T 12-10-2018 IPR001610 PAC motif CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 791 901 3.0E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 534 655 2.1E-11 T 12-10-2018 IPR000014 PAS domain CLSA_c36790 53cdb81bc019f85824ebafc0ecc69921 904 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 286 406 1.7E-18 T 12-10-2018 IPR000014 PAS domain CLSA_c32260 81c33be28f5294c21b186937a759877e 468 Gene3D G3DSA:3.30.1490.150 404 466 9.6E-36 T 12-10-2018 CLSA_c32260 81c33be28f5294c21b186937a759877e 468 SUPERFAMILY SSF143447 296 467 4.84E-43 T 12-10-2018 IPR036071 AMMECR1 domain superfamily CLSA_c32260 81c33be28f5294c21b186937a759877e 468 SUPERFAMILY SSF53213 4 277 3.79E-43 T 12-10-2018 CLSA_c32260 81c33be28f5294c21b186937a759877e 468 Gene3D G3DSA:3.30.700.20 303 403 9.6E-36 T 12-10-2018 IPR027485 AMMECR1, N-terminal CLSA_c32260 81c33be28f5294c21b186937a759877e 468 Pfam PF01871 AMMECR1 303 466 7.1E-38 T 12-10-2018 IPR002733 AMMECR1 domain CLSA_c32260 81c33be28f5294c21b186937a759877e 468 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 268 5.9E-47 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CLSA_c32260 81c33be28f5294c21b186937a759877e 468 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 301 466 5.3E-27 T 12-10-2018 IPR023473 AMMECR1 CLSA_c32260 81c33be28f5294c21b186937a759877e 468 Gene3D G3DSA:3.40.830.10 4 273 8.1E-69 T 12-10-2018 CLSA_c32260 81c33be28f5294c21b186937a759877e 468 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 302 464 8.7E-37 T 12-10-2018 IPR027623 AmmeMemoRadiSam system protein A CLSA_c32260 81c33be28f5294c21b186937a759877e 468 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 103 259 7.5E-11 T 12-10-2018 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 Gene3D G3DSA:3.30.1370.10 201 295 3.2E-9 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 TIGRFAM TIGR00277 HDIG: HDIG domain 325 402 2.3E-21 T 12-10-2018 IPR006675 HDIG domain CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 Pfam PF01966 HD domain 330 421 2.9E-18 T 12-10-2018 IPR006674 HD domain CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 SUPERFAMILY SSF109604 309 460 2.47E-31 T 12-10-2018 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 SMART SM00471 325 431 1.3E-13 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 Pfam PF12072 Domain of unknown function (DUF3552) 5 198 1.5E-60 T 12-10-2018 IPR022711 Ribonuclease Y, N-terminal CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 SMART SM00322 201 268 1.2E-7 T 12-10-2018 IPR004087 K Homology domain GO:0003676 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 Hamap MF_00335 Ribonuclease Y [rny]. 6 513 25.152 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 Pfam PF00013 KH domain 207 260 4.4E-6 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 11 513 5.7E-234 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 SUPERFAMILY SSF54791 201 297 4.75E-16 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CLSA_c14560 78eb6a3efdb885725f9c8ae6deeb4576 513 Gene3D G3DSA:1.10.3210.10 311 465 2.6E-19 T 12-10-2018 CLSA_c22540 0bfdbf8deb2116162e758bb10dbafa64 362 SUPERFAMILY SSF56801 1 350 6.93E-92 T 12-10-2018 CLSA_c22540 0bfdbf8deb2116162e758bb10dbafa64 362 Gene3D G3DSA:3.30.300.310 252 356 1.2E-23 T 12-10-2018 CLSA_c22540 0bfdbf8deb2116162e758bb10dbafa64 362 Gene3D G3DSA:3.40.50.12780 1 251 2.6E-65 T 12-10-2018 CLSA_c22540 0bfdbf8deb2116162e758bb10dbafa64 362 Pfam PF00501 AMP-binding enzyme 2 255 1.6E-59 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c22540 0bfdbf8deb2116162e758bb10dbafa64 362 Pfam PF13193 AMP-binding enzyme C-terminal domain 266 341 3.4E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 26 302 3.5E-74 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 Pfam PF01565 FAD binding domain 40 167 2.6E-23 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 304 92.267 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 Gene3D G3DSA:3.90.78.10 219 304 1.3E-35 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 202 300 4.6E-33 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 SUPERFAMILY SSF56194 198 303 1.22E-37 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 Gene3D G3DSA:3.30.43.10 1 91 3.3E-27 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 Gene3D G3DSA:3.30.465.10 92 218 2.4E-41 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CLSA_c42970 2afe3bd3f0d51e4a869c2282077dacf0 304 SUPERFAMILY SSF56176 27 210 9.45E-42 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 Gene3D G3DSA:3.40.50.10710 207 357 9.1E-189 T 12-10-2018 CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 SMART SM00849 20 215 3.8E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 553 1.5E-205 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 Hamap MF_01491 Ribonuclease J [rnj]. 3 555 48.538 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 PIRSF PIRSF004803 1 555 5.4E-248 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 SUPERFAMILY SSF56281 8 424 5.59E-101 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 Gene3D G3DSA:3.60.15.10 11 442 9.1E-189 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 Gene3D G3DSA:3.10.20.580 449 555 1.4E-39 T 12-10-2018 CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 407 5.3E-9 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLSA_c13320 9cf7ab2ec91add8b7bc5e79986d6ff72 555 Pfam PF00753 Metallo-beta-lactamase superfamily 21 164 7.0E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c01210 3ed215e229dce1faa9ee660b7fecd977 97 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 14 97 4.7E-31 T 12-10-2018 IPR012504 Sporulation protein YabP CLSA_c01210 3ed215e229dce1faa9ee660b7fecd977 97 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 16 97 2.0E-20 T 12-10-2018 IPR012504 Sporulation protein YabP CLSA_c01210 3ed215e229dce1faa9ee660b7fecd977 97 Gene3D G3DSA:2.60.40.2000 22 79 2.7E-20 T 12-10-2018 IPR038705 YabP superfamily CLSA_c01210 3ed215e229dce1faa9ee660b7fecd977 97 Pfam PF07873 YabP family 15 79 1.2E-19 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC CLSA_c01210 3ed215e229dce1faa9ee660b7fecd977 97 PIRSF PIRSF011576 2 97 5.3E-16 T 12-10-2018 IPR012504 Sporulation protein YabP CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 SUPERFAMILY SSF158472 197 247 8.63E-11 T 12-10-2018 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 SMART SM00388 257 323 8.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 SMART SM00387 365 475 3.9E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 Gene3D G3DSA:1.10.287.130 253 322 7.9E-11 T 12-10-2018 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 6.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 6.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 6.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 6.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 SMART SM00304 197 249 2.0E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 Gene3D G3DSA:1.20.1480.50 158 252 5.8E-12 T 12-10-2018 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 Pfam PF00672 HAMP domain 197 245 7.3E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 473 1.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 SUPERFAMILY SSF47384 240 317 1.29E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 Gene3D G3DSA:3.30.565.10 323 475 2.0E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 316 3.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36300 54d474868c77733f9daa1a76341aacd5 475 SUPERFAMILY SSF55874 327 473 8.25E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 SMART SM00342 192 275 7.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 Pfam PF02311 AraC-like ligand binding domain 28 83 6.1E-6 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 SUPERFAMILY SSF51182 27 90 1.41E-7 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 Gene3D G3DSA:2.60.120.10 6 90 1.5E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 2.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 2.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 SUPERFAMILY SSF46689 229 279 1.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 Pfam PF12833 Helix-turn-helix domain 203 276 5.5E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c18770 0361c7a9060eba4abd290b271921c03f 310 Gene3D G3DSA:1.10.10.60 171 285 2.6E-25 T 12-10-2018 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 1.0E-80 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 Gene3D G3DSA:3.30.420.40 1 247 1.5E-89 T 12-10-2018 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 PIRSF PIRSF000538 1 500 4.6E-170 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 452 5.3E-35 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 Gene3D G3DSA:3.30.420.40 249 500 1.3E-82 T 12-10-2018 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 TIGRFAM TIGR01312 XylB: xylulokinase 5 494 1.3E-168 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 SUPERFAMILY SSF53067 252 494 9.15E-66 T 12-10-2018 CLSA_c33000 cc3e6f1c8a174f2febb6c23cb92ecaaf 500 SUPERFAMILY SSF53067 3 249 1.3E-83 T 12-10-2018 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Gene3D G3DSA:1.10.1140.10 436 592 1.9E-49 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 SUPERFAMILY SSF52540 149 440 1.25E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 SUPERFAMILY SSF50615 2 71 5.23E-13 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 1 587 50.762 T 12-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Gene3D G3DSA:2.40.30.20 1 71 8.1E-31 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Gene3D G3DSA:2.40.50.100 116 185 2.1E-176 T 12-10-2018 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Gene3D G3DSA:3.40.50.300 72 435 2.1E-176 T 12-10-2018 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 SUPERFAMILY SSF47917 447 539 2.17E-23 T 12-10-2018 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 84 202 1.5E-43 T 12-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 68 2.1E-14 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c30780 e49e45b9891ff8da86cb0ff6238af7d8 592 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 212 435 1.2E-92 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 123 129 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 SUPERFAMILY SSF46767 72 153 4.71E-32 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 153 43.299 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 74 153 3.0E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 7 69 3.3E-4 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 Gene3D G3DSA:3.30.160.70 1 68 3.6E-13 T 12-10-2018 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 SUPERFAMILY SSF53155 4 78 9.61E-15 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 73 152 2.1E-35 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CLSA_c05540 69c1a919a05155318e09db235f5d3edd 154 Gene3D G3DSA:1.10.10.10 72 154 7.1E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Pfam PF01206 Sulfurtransferase TusA 585 655 8.1E-16 T 12-10-2018 IPR001455 TusA-like domain CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 432 8.9E-12 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 SUPERFAMILY SSF51905 1 318 1.02E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 SUPERFAMILY SSF52821 437 544 3.4E-20 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Gene3D G3DSA:3.40.1260.10 668 826 6.0E-68 T 12-10-2018 IPR027396 DsrEFH-like CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 SUPERFAMILY SSF64307 573 656 1.44E-16 T 12-10-2018 IPR036868 TusA-like domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Pfam PF13686 DsrE/DsrF/DrsH-like family 674 825 1.1E-58 T 12-10-2018 IPR032836 DsrE2-like family CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Gene3D G3DSA:3.50.50.60 4 342 6.8E-183 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-22 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.8E-22 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.8E-22 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.8E-22 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.8E-22 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Gene3D G3DSA:3.30.110.40 578 656 2.2E-21 T 12-10-2018 IPR036868 TusA-like domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 3.1E-14 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.1E-14 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 3.1E-14 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 3.1E-14 T 12-10-2018 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 SUPERFAMILY SSF55424 326 448 5.33E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 SUPERFAMILY SSF75169 675 818 8.37E-21 T 12-10-2018 IPR027396 DsrEFH-like CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Gene3D G3DSA:3.40.250.10 452 548 2.5E-20 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 SMART SM00450 456 549 4.5E-8 T 12-10-2018 IPR001763 Rhodanese-like domain CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 299 3.1E-59 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c15010 9a0a501740d82d6e2db7f671ce2c7c1a 826 Gene3D G3DSA:3.50.50.60 116 442 6.8E-183 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c16440 b691e4afb1a94e2dbc2699e63a01b371 227 Gene3D G3DSA:2.60.120.1460 6 226 4.9E-47 T 12-10-2018 CLSA_c16440 b691e4afb1a94e2dbc2699e63a01b371 227 SUPERFAMILY SSF51206 7 150 3.01E-22 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c16440 b691e4afb1a94e2dbc2699e63a01b371 227 SUPERFAMILY SSF46785 161 224 4.15E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c16440 b691e4afb1a94e2dbc2699e63a01b371 227 Pfam PF13545 Crp-like helix-turn-helix domain 162 223 7.8E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c06800 86ee487c1ec1bb8af2d0847f7128614b 337 SUPERFAMILY SSF51569 1 336 1.74E-118 T 12-10-2018 CLSA_c06800 86ee487c1ec1bb8af2d0847f7128614b 337 Gene3D G3DSA:3.30.70.1140 1 75 2.1E-25 T 12-10-2018 CLSA_c06800 86ee487c1ec1bb8af2d0847f7128614b 337 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 328 4.8E-125 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CLSA_c06800 86ee487c1ec1bb8af2d0847f7128614b 337 Gene3D G3DSA:3.20.20.70 76 332 3.7E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c06800 86ee487c1ec1bb8af2d0847f7128614b 337 Pfam PF00793 DAHP synthetase I family 86 327 5.2E-77 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 SUPERFAMILY SSF52283 2 129 8.93E-27 T 12-10-2018 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 SUPERFAMILY SSF51735 102 297 1.11E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 324 1.0E-16 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 Gene3D G3DSA:3.40.50.720 101 295 3.5E-117 T 12-10-2018 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 Gene3D G3DSA:3.40.50.720 2 317 3.5E-117 T 12-10-2018 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 295 3.2E-48 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLSA_c17820 31a16d0a776e2d98a56cd2b180566540 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c16010 e4ca1a69cf4c3929658816806f4ec8ec 387 SUPERFAMILY SSF53474 28 383 7.11E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c16010 e4ca1a69cf4c3929658816806f4ec8ec 387 Pfam PF00561 alpha/beta hydrolase fold 140 237 2.3E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c16010 e4ca1a69cf4c3929658816806f4ec8ec 387 Gene3D G3DSA:3.40.50.1820 115 385 2.0E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 Gene3D G3DSA:3.40.50.300 1 194 1.8E-18 T 12-10-2018 CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 SMART SM00850 238 337 1.7E-28 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 PIRSF PIRSF036612 1 338 4.3E-103 T 12-10-2018 IPR012046 LytTR transcriptional regulator with ABC transporter ATP-binding domain CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 SUPERFAMILY SSF52540 41 207 1.82E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 Pfam PF00005 ABC transporter 41 153 2.4E-6 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 Pfam PF04397 LytTr DNA-binding domain 239 336 5.5E-23 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c10090 42e2d6abf0b96ddcd16b871a67b06727 338 Gene3D G3DSA:2.40.50.40 230 298 2.3E-11 T 12-10-2018 CLSA_c06170 26eb5c84cb1470276b118ce479230d5c 219 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 213 21.064 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CLSA_c06170 26eb5c84cb1470276b118ce479230d5c 219 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 211 8.9E-29 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CLSA_c06170 26eb5c84cb1470276b118ce479230d5c 219 SUPERFAMILY SSF63848 109 212 3.14E-31 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 CLSA_c06170 26eb5c84cb1470276b118ce479230d5c 219 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 111 210 5.1E-30 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CLSA_c06170 26eb5c84cb1470276b118ce479230d5c 219 Gene3D G3DSA:2.160.20.70 92 214 2.3E-36 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 Gene3D G3DSA:3.90.190.10 58 314 4.7E-94 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 Pfam PF14566 Inositol hexakisphosphate 113 253 9.2E-27 T 12-10-2018 CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 SMART SM01301 113 254 4.3E-47 T 12-10-2018 CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 Gene3D G3DSA:3.30.70.1690 135 205 4.7E-94 T 12-10-2018 CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 234 244 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 SUPERFAMILY SSF52799 75 316 2.18E-29 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like CLSA_c30970 700db35a67c666be84ea18185eaf1bc1 321 ProDom PD069361 HYDROLASE VIRULENCE PLASMID AVRBS1.1 HEXAPHOSPHATE TYROSINE PHOSPHOHYDROLASE PRECURSOR MYO-INOSITOL AVIRULENCE 226 314 7.0E-18 T 12-10-2018 CLSA_c18000 eebfdef5ab591df28498c68f88f47523 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 201 2.0E-19 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain CLSA_c18000 eebfdef5ab591df28498c68f88f47523 217 SUPERFAMILY SSF52266 2 213 7.33E-26 T 12-10-2018 CLSA_c18000 eebfdef5ab591df28498c68f88f47523 217 Gene3D G3DSA:3.40.50.1110 1 214 2.3E-76 T 12-10-2018 IPR036514 SGNH hydrolase superfamily CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 SUPERFAMILY SSF50249 2 124 2.23E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PIRSF PIRSF002133 1 124 2.7E-53 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.892 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-41 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.3E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.3E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.3E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.3E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.3E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.3E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.3E-68 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01960 b164ff1c498a521a83d024cd462b8314 125 Gene3D G3DSA:2.40.50.140 1 125 1.1E-61 T 12-10-2018 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 187 4.3E-31 T 12-10-2018 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 Gene3D G3DSA:1.10.150.240 19 87 1.3E-46 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 SUPERFAMILY SSF56784 4 213 6.24E-44 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 Gene3D G3DSA:3.40.50.1000 9 209 1.3E-46 T 12-10-2018 IPR023214 HAD superfamily CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 80 163 5.9E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 187 1.2E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 189 1.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c43370 88e2db6da372cd22751689584a58f2bb 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.2E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c22360 07be821b83863033099fce372510fe1f 123 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 18 117 6.9E-15 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 337 4.4E-79 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 619 4.1E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 2.1E-13 T 12-10-2018 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 404 2.1E-13 T 12-10-2018 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 538 2.1E-13 T 12-10-2018 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 SUPERFAMILY SSF51971 340 549 9.18E-33 T 12-10-2018 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 Gene3D G3DSA:3.40.50.720 384 653 2.5E-51 T 12-10-2018 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 SUPERFAMILY SSF51395 3 353 6.2E-106 T 12-10-2018 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 SUPERFAMILY SSF51905 517 638 8.63E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 Gene3D G3DSA:3.50.50.60 480 611 2.5E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 516 540 8.5E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 573 589 8.5E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 384 406 8.5E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c07030 3f8aa2faec44d066af48552b44ff0c84 666 Gene3D G3DSA:3.20.20.70 1 381 6.3E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.40.50.12780 1543 1966 6.1E-120 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.40.50.12780 477 900 2.1E-119 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SMART SM00823 Phosphopantetheine attachment site 1016 1085 0.0036 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF56801 1509 2095 2.88E-148 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.559.30 208 471 8.9E-32 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1040 1055 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF52777 1274 1514 1.89E-53 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00501 AMP-binding enzyme 1551 1974 7.8E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00501 AMP-binding enzyme 485 908 2.3E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.559.10 20 194 1.4E-29 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.559.10 2150 2327 1.6E-53 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF52777 208 467 1.56E-30 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:1.10.1200.10 2070 2149 1.6E-22 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:1.10.1200.10 1004 1090 8.2E-24 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF47336 2074 2145 5.89E-18 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2465 2619 1.2E-48 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF52777 1103 1266 4.67E-37 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.300.30 903 1003 3.2E-33 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.300.30 1969 2069 6.5E-33 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.559.10 1103 1460 1.9E-139 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00668 Condensation domain 2159 2611 6.9E-101 T 12-10-2018 IPR001242 Condensation domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00668 Condensation domain 1098 1531 3.0E-122 T 12-10-2018 IPR001242 Condensation domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00668 Condensation domain 13 465 4.0E-72 T 12-10-2018 IPR001242 Condensation domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1711 1722 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF56801 443 1029 3.66E-148 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF13193 AMP-binding enzyme C-terminal domain 1982 2055 2.5E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF13193 AMP-binding enzyme C-terminal domain 916 989 5.2E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.559.30 1270 1515 1.9E-139 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1572 1998 3.4E-129 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 506 932 9.7E-129 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 ProSitePatterns PS00455 Putative AMP-binding domain signature. 645 656 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF47336 1008 1081 1.3E-18 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Gene3D G3DSA:3.30.559.30 2328 2599 3.6E-64 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF52777 2346 2594 9.45E-35 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF52777 2156 2332 3.0E-31 T 12-10-2018 CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00550 Phosphopantetheine attachment site 2083 2144 4.7E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 Pfam PF00550 Phosphopantetheine attachment site 1017 1080 3.6E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2106 2121 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site CLSA_c37650 0f477ee6c8fc179a6a4074e4b18a65e8 2624 SUPERFAMILY SSF52777 18 174 2.45E-28 T 12-10-2018 CLSA_c33340 dcf7c54146a9dc5e7fc670e6aa13b500 602 Pfam PF05569 BlaR1 peptidase M56 7 298 1.1E-51 T 12-10-2018 IPR008756 Peptidase M56 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 359 2.0E-141 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.4E-45 T 12-10-2018 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 Gene3D G3DSA:3.40.50.300 13 177 7.2E-103 T 12-10-2018 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 236 362 2.1E-14 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 SMART SM00382 37 179 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 Gene3D G3DSA:1.10.8.60 8 237 7.2E-103 T 12-10-2018 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 SUPERFAMILY SSF48019 243 364 2.3E-23 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 Gene3D G3DSA:1.20.272.10 244 365 3.4E-13 T 12-10-2018 CLSA_c44100 31c243a6b08c06d038f8a301334e0799 548 SUPERFAMILY SSF52540 31 223 5.44E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 Gene3D G3DSA:3.30.70.2740 344 425 2.1E-14 T 12-10-2018 CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 Gene3D G3DSA:1.10.45.10 426 466 1.5E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 SUPERFAMILY SSF55103 195 466 1.24E-57 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 465 1.1E-60 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 SUPERFAMILY SSF56176 22 222 2.71E-68 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 Gene3D G3DSA:3.30.465.40 18 241 2.8E-74 T 12-10-2018 CLSA_c03500 5ea815d0c1d9dbd36d8d0e325e40f8ae 467 Pfam PF01565 FAD binding domain 47 184 1.5E-42 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLSA_c25780 cc21b6a4d2c55dfc413b25e26c003049 332 Gene3D G3DSA:3.90.1720.10 136 332 2.2E-47 T 12-10-2018 CLSA_c25780 cc21b6a4d2c55dfc413b25e26c003049 332 Pfam PF00877 NlpC/P60 family 230 325 4.9E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CLSA_c25780 cc21b6a4d2c55dfc413b25e26c003049 332 SUPERFAMILY SSF54001 207 330 4.41E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c25780 cc21b6a4d2c55dfc413b25e26c003049 332 SUPERFAMILY SSF57997 28 91 3.71E-5 T 12-10-2018 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 Gene3D G3DSA:3.30.420.40 248 514 7.4E-56 T 12-10-2018 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 SUPERFAMILY SSF53067 252 504 3.13E-47 T 12-10-2018 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 Gene3D G3DSA:3.30.420.40 1 247 3.4E-58 T 12-10-2018 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 PIRSF PIRSF000538 2 511 8.7E-121 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 SUPERFAMILY SSF53067 3 253 8.7E-55 T 12-10-2018 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 457 2.4E-21 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLSA_c21380 70f7d832225e5c1294ce77415e0aca5d 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.9E-46 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 Pfam PF02810 SEC-C motif 5 22 1.1E-9 T 12-10-2018 IPR004027 SEC-C motif CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 Gene3D G3DSA:3.90.230.10 41 289 1.5E-100 T 12-10-2018 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 44 288 8.9E-90 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 SUPERFAMILY SSF103642 4 24 5.4E-7 T 12-10-2018 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 Pfam PF00557 Metallopeptidase family M24 52 281 3.3E-56 T 12-10-2018 IPR000994 Peptidase M24 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 231 243 8.6E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 200 212 8.6E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 107 120 8.6E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 130 146 8.6E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 SUPERFAMILY SSF55920 42 289 2.36E-85 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 206 224 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c30430 b03c4b9de81c32da162b6ba48b8e9984 289 Hamap MF_01974 Methionine aminopeptidase [map]. 42 289 38.812 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 SUPERFAMILY SSF52540 60 396 6.05E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 SMART SM01086 311 405 2.0E-31 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 SMART SM00382 107 375 2.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 SUPERFAMILY SSF57716 10 45 3.99E-11 T 12-10-2018 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.2 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 6.3E-17 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Pfam PF06689 ClpX C4-type zinc finger 11 46 6.6E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 304 2.1E-50 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Gene3D G3DSA:3.30.50.30 2 49 2.9E-22 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Gene3D G3DSA:3.40.50.300 53 309 7.7E-110 T 12-10-2018 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 SMART SM00994 9 48 1.5E-22 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 405 8.7E-206 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CLSA_c31220 eb634d682ae7effec97d1549f2072b19 429 Gene3D G3DSA:1.10.8.60 310 415 4.0E-38 T 12-10-2018 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 2.7E-181 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 SMART SM00382 175 320 1.6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 SMART SM00382 2 167 0.47 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 434 1.1E-31 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Gene3D G3DSA:3.40.50.300 171 350 8.6E-56 T 12-10-2018 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Pfam PF01926 50S ribosome-binding GTPase 6 121 6.5E-28 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Pfam PF01926 50S ribosome-binding GTPase 178 296 1.5E-27 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 PIRSF PIRSF006485 2 438 2.4E-180 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Hamap MF_00195 GTPase Der [der]. 3 437 41.024 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Gene3D G3DSA:3.30.300.20 354 437 4.8E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 5.7E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 74 92 5.7E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 SUPERFAMILY SSF52540 140 436 9.57E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 SUPERFAMILY SSF52540 6 169 6.3E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 150 1.4E-27 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 334 4.1E-32 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c13550 b057c18e00e8510ab2a20ec69c3f8e1f 438 Gene3D G3DSA:3.40.50.300 1 164 1.2E-47 T 12-10-2018 CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 Gene3D G3DSA:1.10.10.10 4 143 7.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 SUPERFAMILY SSF46785 10 144 1.15E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 SMART SM00347 28 128 7.9E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c13070 3e620c3757cddd23e8e06baf9be5bc98 149 Pfam PF13463 Winged helix DNA-binding domain 40 101 9.4E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c31780 d7c16bacca1cd70c103aad005fcac2c2 126 Pfam PF14107 Domain of unknown function (DUF4280) 6 125 2.6E-33 T 12-10-2018 IPR025460 Protein of unknown function DUF4280 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 427 2.7E-80 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 SUPERFAMILY SSF103473 9 475 1.96E-71 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 Gene3D G3DSA:1.20.1250.20 260 477 1.1E-24 T 12-10-2018 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 Pfam PF07690 Major Facilitator Superfamily 22 412 9.2E-59 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 Gene3D G3DSA:1.20.1720.10 17 255 1.2E-47 T 12-10-2018 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.3E-10 T 12-10-2018 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.3E-10 T 12-10-2018 CLSA_c45060 1e40d6a287a7fbb9eaf382bc6e0e37e9 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.3E-10 T 12-10-2018 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 SUPERFAMILY SSF58104 394 684 1.83E-60 T 12-10-2018 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 487 630 8.5E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 365 635 0.009 T 12-10-2018 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 Pfam PF02743 Cache domain 33 283 4.1E-23 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 SMART SM00283 410 685 9.7E-53 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 Gene3D G3DSA:3.30.450.20 60 205 5.0E-24 T 12-10-2018 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 Gene3D G3DSA:1.10.287.950 365 685 6.7E-63 T 12-10-2018 CLSA_c28190 766576406aaa98c8b7cd2851ce952c39 687 Gene3D G3DSA:3.30.450.20 50 292 5.0E-24 T 12-10-2018 CLSA_c14020 835262963c9a1e462d742f0e15732526 288 Pfam PF01926 50S ribosome-binding GTPase 122 195 7.7E-16 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c14020 835262963c9a1e462d742f0e15732526 288 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 4.6E-111 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis CLSA_c14020 835262963c9a1e462d742f0e15732526 288 PIRSF PIRSF006230 1 283 1.4E-100 T 12-10-2018 IPR016478 GTPase, MTG1 CLSA_c14020 835262963c9a1e462d742f0e15732526 288 SUPERFAMILY SSF52540 9 273 6.26E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14020 835262963c9a1e462d742f0e15732526 288 Gene3D G3DSA:1.10.1580.10 180 272 1.5E-29 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily CLSA_c14020 835262963c9a1e462d742f0e15732526 288 Gene3D G3DSA:3.40.50.300 12 179 2.5E-44 T 12-10-2018 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 99 115 2.8E-27 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 168 185 2.8E-27 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 291 309 2.8E-27 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 335 351 2.8E-27 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 429 444 2.8E-27 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 132 152 2.8E-27 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 SUPERFAMILY SSF101821 111 241 3.02E-37 T 12-10-2018 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 34 461 1.1E-87 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 Gene3D G3DSA:2.30.250.10 110 246 2.2E-151 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 Gene3D G3DSA:3.40.630.10 45 453 2.2E-151 T 12-10-2018 CLSA_c30640 facb477a4a893829ebdad5359c25eca1 465 SUPERFAMILY SSF53187 10 462 5.03E-106 T 12-10-2018 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 SUPERFAMILY SSF47384 253 336 1.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 Gene3D G3DSA:1.20.1480.50 174 266 1.5E-7 T 12-10-2018 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 Gene3D G3DSA:1.10.287.130 267 336 4.5E-17 T 12-10-2018 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 SUPERFAMILY SSF158472 211 259 6.02E-7 T 12-10-2018 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 491 9.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 334 7.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 Gene3D G3DSA:3.30.565.10 344 494 1.4E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 SUPERFAMILY SSF55874 326 492 3.67E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 434 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 448 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 SMART SM00388 270 337 1.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 SMART SM00304 210 262 5.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c05430 431b0fa405f68ff649cf29fa7f4b5fde 494 SMART SM00387 383 494 4.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c29510 05c31d0835030dedcc379b9f386cfbb7 183 Pfam PF06866 Protein of unknown function (DUF1256) 6 162 1.1E-36 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 CLSA_c29510 05c31d0835030dedcc379b9f386cfbb7 183 SUPERFAMILY SSF53163 6 135 4.18E-29 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 Gene3D G3DSA:1.20.120.160 3 153 1.3E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 Gene3D G3DSA:3.30.750.24 351 472 6.1E-6 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 SUPERFAMILY SSF47226 5 112 9.29E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 SUPERFAMILY SSF55052 162 244 5.23E-7 T 12-10-2018 IPR035891 CheY-binding domain of CheA CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 Pfam PF01627 Hpt domain 5 86 1.7E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 Pfam PF07194 P2 response regulator binding domain 163 244 4.4E-15 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLSA_c20530 a9fcbb81ed112d24ac16eee4ec5d33f4 474 SMART SM00073 3 99 3.8E-21 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Gene3D G3DSA:2.40.50.180 366 478 1.8E-41 T 12-10-2018 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Gene3D G3DSA:2.30.30.40 16 143 1.2E-40 T 12-10-2018 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 SUPERFAMILY SSF50341 343 484 1.11E-35 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Pfam PF01584 CheW-like domain 14 151 2.4E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Pfam PF01584 CheW-like domain 182 317 2.4E-31 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Pfam PF01584 CheW-like domain 347 484 1.1E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Gene3D G3DSA:2.40.50.180 33 144 1.2E-40 T 12-10-2018 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 SUPERFAMILY SSF50341 177 319 9.02E-35 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Gene3D G3DSA:2.30.30.40 349 477 1.8E-41 T 12-10-2018 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Gene3D G3DSA:2.30.30.40 184 310 2.7E-34 T 12-10-2018 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 SMART SM00260 10 149 3.5E-41 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 SMART SM00260 178 316 6.5E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 SMART SM00260 343 483 2.4E-42 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 Gene3D G3DSA:2.40.50.180 201 267 2.7E-34 T 12-10-2018 CLSA_c20390 264389979758add1b521b94567c0c8ec 489 SUPERFAMILY SSF50341 4 152 1.31E-36 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c02420 0baf5983a2375e3a73c323b4571e2088 287 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 9.7E-21 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 CLSA_c02420 0baf5983a2375e3a73c323b4571e2088 287 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 221 1.6E-57 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c02420 0baf5983a2375e3a73c323b4571e2088 287 PIRSF PIRSF006483 1 287 7.2E-85 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c02420 0baf5983a2375e3a73c323b4571e2088 287 Gene3D G3DSA:3.30.70.120 199 274 2.1E-20 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c42630 fc2aa9c4a85e1fead7f5cb16e7e6a946 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c42630 fc2aa9c4a85e1fead7f5cb16e7e6a946 240 PIRSF PIRSF039085 1 240 1.2E-119 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLSA_c42630 fc2aa9c4a85e1fead7f5cb16e7e6a946 240 Pfam PF00005 ABC transporter 18 165 4.2E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c42630 fc2aa9c4a85e1fead7f5cb16e7e6a946 240 Gene3D G3DSA:3.40.50.300 1 240 6.3E-84 T 12-10-2018 CLSA_c42630 fc2aa9c4a85e1fead7f5cb16e7e6a946 240 SMART SM00382 26 221 5.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c42630 fc2aa9c4a85e1fead7f5cb16e7e6a946 240 SUPERFAMILY SSF52540 1 235 2.54E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 PIRSF PIRSF006816 1 263 4.8E-65 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 Pfam PF00175 Oxidoreductase NAD-binding domain 110 204 5.8E-7 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 Gene3D G3DSA:3.40.50.80 107 211 5.1E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 Gene3D G3DSA:2.40.30.10 1 91 4.5E-25 T 12-10-2018 CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 SUPERFAMILY SSF63380 1 91 1.39E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 SUPERFAMILY SSF52343 104 256 3.14E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c16150 c740b429d8bdbbf9ee124ca782521f78 296 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 221 257 2.3E-12 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLSA_c22100 4131c6751260bb5612046eef678fec27 220 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 17 172 1.1E-8 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CLSA_c22100 4131c6751260bb5612046eef678fec27 220 SUPERFAMILY SSF52540 9 199 2.67E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22100 4131c6751260bb5612046eef678fec27 220 Gene3D G3DSA:3.40.50.300 2 207 3.1E-47 T 12-10-2018 CLSA_c41310 0764865362f67e6a361ff3248952956c 286 Pfam PF04991 LicD family 36 261 7.4E-56 T 12-10-2018 IPR007074 LicD family CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 PIRSF PIRSF000770 3 239 8.0E-37 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 SUPERFAMILY SSF88659 149 237 3.55E-24 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 Gene3D G3DSA:1.20.140.160 86 238 1.1E-42 T 12-10-2018 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 SUPERFAMILY SSF88946 8 83 2.83E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 Gene3D G3DSA:1.10.1740.10 2 82 3.0E-29 T 12-10-2018 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 SUPERFAMILY SSF88659 87 162 1.22E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 234 3.3E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 Pfam PF04542 Sigma-70 region 2 14 84 7.1E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 40 53 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 Pfam PF04539 Sigma-70 region 3 93 171 1.1E-10 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 PRINTS PR00046 Major sigma-70 factor signature 220 231 1.0E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 PRINTS PR00046 Major sigma-70 factor signature 205 220 1.0E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 PRINTS PR00046 Major sigma-70 factor signature 40 53 1.0E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 PRINTS PR00046 Major sigma-70 factor signature 188 200 1.0E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 Pfam PF04545 Sigma-70, region 4 184 233 2.9E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c39170 a6911b1d7f0a927ce7fe8e698bd9bfe1 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 13 236 2.3E-78 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 Gene3D G3DSA:1.20.1560.10 1 324 3.3E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 Gene3D G3DSA:3.40.50.300 331 574 4.0E-74 T 12-10-2018 CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 SUPERFAMILY SSF90123 9 318 4.45E-47 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 Pfam PF00005 ABC transporter 358 504 5.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 Pfam PF00664 ABC transporter transmembrane region 23 291 1.8E-26 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 SUPERFAMILY SSF52540 336 570 4.61E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 SMART SM00382 367 550 3.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c37060 3b0b03ce7509fada648755e83d188981 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c00550 129c8cd568b9746ecb214e17b21c9eb8 309 SUPERFAMILY SSF102114 5 297 3.01E-54 T 12-10-2018 CLSA_c00550 129c8cd568b9746ecb214e17b21c9eb8 309 Pfam PF16199 Radical_SAM C-terminal domain 215 297 1.9E-24 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CLSA_c00550 129c8cd568b9746ecb214e17b21c9eb8 309 SMART SM00729 26 253 6.6E-41 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c00550 129c8cd568b9746ecb214e17b21c9eb8 309 Gene3D G3DSA:3.80.30.20 43 251 1.6E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c00550 129c8cd568b9746ecb214e17b21c9eb8 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 9 308 3.4E-115 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 CLSA_c00550 129c8cd568b9746ecb214e17b21c9eb8 309 Pfam PF04055 Radical SAM superfamily 46 209 4.4E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c18330 4f287f4331daae09749a4d435c4e0a45 254 Gene3D G3DSA:3.30.420.40 91 230 5.6E-72 T 12-10-2018 CLSA_c18330 4f287f4331daae09749a4d435c4e0a45 254 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 4 245 6.6E-77 T 12-10-2018 IPR008275 CoA enzyme activase CLSA_c18330 4f287f4331daae09749a4d435c4e0a45 254 SUPERFAMILY SSF53067 4 247 9.51E-38 T 12-10-2018 CLSA_c18330 4f287f4331daae09749a4d435c4e0a45 254 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 247 6.9E-49 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c18330 4f287f4331daae09749a4d435c4e0a45 254 Gene3D G3DSA:3.30.420.40 6 247 5.6E-72 T 12-10-2018 CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 Gene3D G3DSA:1.10.10.10 2 74 8.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 268 1.2E-115 T 12-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 Gene3D G3DSA:3.40.50.2020 77 270 7.2E-46 T 12-10-2018 CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 Pfam PF00156 Phosphoribosyl transferase domain 112 254 4.2E-18 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 Pfam PF09182 Bacterial purine repressor, N-terminal 6 74 4.7E-28 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 SUPERFAMILY SSF46785 3 74 2.45E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 14 74 1.0E-22 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 CLSA_c01040 c2d9318707d1340dcf601994e35feed1 271 SUPERFAMILY SSF53271 97 257 1.7E-31 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c45450 a73ebf102a8af95fd92a36bc4244907a 239 Pfam PF02527 rRNA small subunit methyltransferase G 22 203 1.0E-55 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLSA_c45450 a73ebf102a8af95fd92a36bc4244907a 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 218 4.0E-57 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLSA_c45450 a73ebf102a8af95fd92a36bc4244907a 239 SUPERFAMILY SSF53335 5 238 1.17E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c45450 a73ebf102a8af95fd92a36bc4244907a 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 215 29.027 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLSA_c45450 a73ebf102a8af95fd92a36bc4244907a 239 PIRSF PIRSF003078 1 221 7.6E-59 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLSA_c45450 a73ebf102a8af95fd92a36bc4244907a 239 Gene3D G3DSA:3.40.50.150 2 239 6.5E-84 T 12-10-2018 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 SUPERFAMILY SSF53790 1 251 7.72E-75 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 Gene3D G3DSA:3.30.950.10 118 266 1.7E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 Gene3D G3DSA:3.40.1010.10 1 117 1.2E-39 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 Gene3D G3DSA:3.40.50.10090 399 486 1.0E-14 T 12-10-2018 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 211 5.5E-45 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 PIRSF PIRSF036426 1 251 9.3E-91 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 SUPERFAMILY SSF69618 249 485 1.44E-50 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 236 5.0E-92 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 Gene3D G3DSA:3.40.50.10090 293 398 5.8E-21 T 12-10-2018 CLSA_c31670 9e9ccbd9f0f4fc28b816af9ea3fa2c57 487 Pfam PF02602 Uroporphyrinogen-III synthase HemD 263 479 9.6E-49 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c19490 1c20cdccd8921c0d942edfe4b2b84f28 475 SUPERFAMILY SSF103473 32 452 7.19E-39 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c19490 1c20cdccd8921c0d942edfe4b2b84f28 475 Gene3D G3DSA:1.20.1250.20 32 451 9.3E-23 T 12-10-2018 CLSA_c19490 1c20cdccd8921c0d942edfe4b2b84f28 475 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 31 466 1.8E-134 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CLSA_c19490 1c20cdccd8921c0d942edfe4b2b84f28 475 Pfam PF13347 MFS/sugar transport protein 33 453 1.3E-88 T 12-10-2018 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 Gene3D G3DSA:3.90.230.10 1 249 3.7E-102 T 12-10-2018 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.5E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.5E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.5E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.5E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 Pfam PF00557 Metallopeptidase family M24 12 237 2.8E-50 T 12-10-2018 IPR000994 Peptidase M24 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 SUPERFAMILY SSF55920 1 246 1.19E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 40.632 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.0E-100 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c02240 4a7bb74544b1c11a362d4a5ae9a37d24 249 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c20080 21886791b21854aaca074004626156c4 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 284 440 1.7E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20080 21886791b21854aaca074004626156c4 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 186 1.1E-27 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c20080 21886791b21854aaca074004626156c4 537 SMART SM00283 225 472 8.3E-80 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20080 21886791b21854aaca074004626156c4 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 6.5E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c20080 21886791b21854aaca074004626156c4 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 6.5E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c20080 21886791b21854aaca074004626156c4 537 SUPERFAMILY SSF58104 108 477 7.72E-60 T 12-10-2018 CLSA_c20080 21886791b21854aaca074004626156c4 537 Gene3D G3DSA:1.10.287.950 212 473 4.8E-65 T 12-10-2018 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 2.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 2.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 Gene3D G3DSA:1.10.287.130 475 556 9.7E-22 T 12-10-2018 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 Gene3D G3DSA:3.30.565.10 557 720 9.5E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 351 463 4.0E-9 T 12-10-2018 IPR000014 PAS domain CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 599 709 4.7E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 SUPERFAMILY SSF55785 352 461 1.58E-13 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 SMART SM00388 484 552 5.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 Pfam PF00512 His Kinase A (phospho-acceptor) domain 485 552 3.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 SMART SM00387 598 710 1.9E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 Gene3D G3DSA:3.30.450.20 335 463 3.9E-14 T 12-10-2018 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 SUPERFAMILY SSF55874 541 712 1.38E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 SUPERFAMILY SSF47384 473 552 2.94E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c36810 ba78560144338447eaf32ce1cc5f292d 741 Pfam PF07796 Protein of unknown function (DUF1638) 48 181 3.1E-11 T 12-10-2018 IPR012437 Domain of unknown function DUF1638 CLSA_c06730 3823f496ddc49538850670869107a424 670 SMART SM00606 382 501 1.6E-12 T 12-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 CLSA_c06730 3823f496ddc49538850670869107a424 670 Gene3D G3DSA:2.115.10.20 51 380 4.7E-101 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c06730 3823f496ddc49538850670869107a424 670 Gene3D G3DSA:2.80.10.50 620 669 1.7E-8 T 12-10-2018 CLSA_c06730 3823f496ddc49538850670869107a424 670 Gene3D G3DSA:2.60.120.260 381 503 7.0E-20 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c06730 3823f496ddc49538850670869107a424 670 SUPERFAMILY SSF49785 382 501 3.91E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c06730 3823f496ddc49538850670869107a424 670 SUPERFAMILY SSF75005 49 366 1.21E-54 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c06730 3823f496ddc49538850670869107a424 670 Gene3D G3DSA:2.80.10.50 526 619 3.1E-13 T 12-10-2018 CLSA_c06730 3823f496ddc49538850670869107a424 670 SMART SM00458 528 667 0.0021 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c06730 3823f496ddc49538850670869107a424 670 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 525 603 1.4E-13 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c06730 3823f496ddc49538850670869107a424 670 SUPERFAMILY SSF50370 525 667 4.74E-30 T 12-10-2018 IPR035992 Ricin B-like lectins CLSA_c06730 3823f496ddc49538850670869107a424 670 Pfam PF04616 Glycosyl hydrolases family 43 63 365 7.7E-31 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 Gene3D G3DSA:3.40.50.2300 4 128 9.4E-36 T 12-10-2018 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 Pfam PF00072 Response regulator receiver domain 6 114 3.9E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 SUPERFAMILY SSF46894 126 227 1.87E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 SUPERFAMILY SSF52172 5 119 8.4E-38 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 SMART SM00448 4 113 2.0E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 SMART SM00862 151 227 6.1E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.8E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c40830 364fd12d0dd12ce3ef12cfb4befd129c 229 Gene3D G3DSA:1.10.10.10 129 229 7.6E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c00530 fc2d0ab0e198c2d5441cd19d4604e937 334 PIRSF PIRSF004869 1 323 1.2E-78 T 12-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted CLSA_c00530 fc2d0ab0e198c2d5441cd19d4604e937 334 Gene3D G3DSA:3.20.20.70 52 290 5.9E-10 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c00530 fc2d0ab0e198c2d5441cd19d4604e937 334 Pfam PF04055 Radical SAM superfamily 68 250 2.0E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 2.4E-39 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 SUPERFAMILY SSF54821 109 207 1.12E-37 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 36.58 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 Pfam PF07650 KH domain 39 111 7.8E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 Gene3D G3DSA:3.30.1140.32 109 209 2.3E-41 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 SMART SM00322 60 126 8.3E-9 T 12-10-2018 IPR004087 K Homology domain GO:0003676 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 SUPERFAMILY SSF54814 2 107 2.3E-37 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 Gene3D G3DSA:3.30.300.20 17 108 1.0E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c02070 0cb6b13a55e1491590f3890e0dc26fbe 221 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 1.5E-91 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 Gene3D G3DSA:3.60.15.10 2 247 1.8E-90 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 Pfam PF00258 Flavodoxin 257 307 1.5E-5 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 SMART SM00849 35 227 9.9E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 Pfam PF00753 Metallo-beta-lactamase superfamily 35 192 3.1E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 ProSitePatterns PS00201 Flavodoxin signature. 257 273 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 PIRSF PIRSF005243 1 399 9.8E-120 T 12-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 Gene3D G3DSA:3.40.50.360 249 394 2.5E-26 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 SUPERFAMILY SSF52218 253 396 8.89E-24 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c18540 75caa1e0cab34edc10896e973d3c2335 399 SUPERFAMILY SSF56281 4 289 1.34E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 6.0E-50 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 9.3E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 SUPERFAMILY SSF52467 436 556 7.91E-37 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 PRINTS PR00163 Rubredoxin signature 586 602 1.3E-7 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 PRINTS PR00163 Rubredoxin signature 616 632 1.3E-7 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Gene3D G3DSA:1.10.540.10 1 120 3.2E-40 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.0E-35 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Gene3D G3DSA:2.40.110.10 121 234 1.7E-43 T 12-10-2018 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 ProSitePatterns PS00202 Rubredoxin signature. 616 626 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 SUPERFAMILY SSF47203 227 381 6.93E-58 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Gene3D G3DSA:2.20.28.10 585 635 2.4E-19 T 12-10-2018 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 438 520 6.3E-26 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Gene3D G3DSA:3.40.50.1220 434 566 3.7E-43 T 12-10-2018 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 SUPERFAMILY SSF57802 583 634 5.39E-17 T 12-10-2018 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Gene3D G3DSA:1.20.140.10 235 397 1.2E-54 T 12-10-2018 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 Pfam PF00301 Rubredoxin 587 632 5.0E-17 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c18530 9c6a47dfa4b910bbdfb9d14625bbefff 635 SUPERFAMILY SSF56645 4 242 9.69E-87 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CLSA_c22900 e05a3ce6c91d967c31952082573d1d08 78 Pfam PF10779 Haemolysin XhlA 6 71 3.3E-27 T 12-10-2018 IPR019715 Haemolysin XhlA CLSA_c22900 e05a3ce6c91d967c31952082573d1d08 78 Gene3D G3DSA:1.20.5.340 2 59 2.0E-5 T 12-10-2018 CLSA_c22900 e05a3ce6c91d967c31952082573d1d08 78 SUPERFAMILY SSF57997 6 49 4.14E-5 T 12-10-2018 CLSA_c32140 358be396e23071d85ffa435969416b35 254 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 253 7.9E-62 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CLSA_c32140 358be396e23071d85ffa435969416b35 254 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 249 1.9E-66 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CLSA_c05730 7e7a58687eafb21d645a8b6e88e0323a 153 SUPERFAMILY SSF52540 22 121 6.99E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05730 7e7a58687eafb21d645a8b6e88e0323a 153 Gene3D G3DSA:3.40.50.300 1 149 5.1E-41 T 12-10-2018 CLSA_c05730 7e7a58687eafb21d645a8b6e88e0323a 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 126 2.6E-38 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CLSA_c05730 7e7a58687eafb21d645a8b6e88e0323a 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 125 1.5E-36 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CLSA_c45140 ee91e083d00c881669cf386e6e95b4d4 270 SMART SM00849 41 233 0.0066 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c45140 ee91e083d00c881669cf386e6e95b4d4 270 Gene3D G3DSA:3.60.15.10 11 270 6.7E-55 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c45140 ee91e083d00c881669cf386e6e95b4d4 270 SUPERFAMILY SSF56281 37 245 1.01E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c45140 ee91e083d00c881669cf386e6e95b4d4 270 Pfam PF12706 Beta-lactamase superfamily domain 54 234 6.9E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 Gene3D G3DSA:3.30.1330.10 1 160 4.2E-47 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 PIRSF PIRSF036407 1 345 1.0E-123 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 153 3.4E-18 T 12-10-2018 IPR016188 PurM-like, N-terminal domain CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 Gene3D G3DSA:3.90.650.10 161 345 5.1E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 312 4.1E-118 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 Hamap MF_00625 Selenide, water dikinase [selD]. 4 345 40.799 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 344 1.9E-28 T 12-10-2018 IPR010918 PurM-like, C-terminal domain CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 SUPERFAMILY SSF55326 7 159 7.48E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c18310 098965bdd5569b8a8e9bd9ec0c88622f 345 SUPERFAMILY SSF56042 160 342 3.59E-48 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 Gene3D G3DSA:3.20.20.70 62 325 4.6E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 340 71.913 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 PIRSF PIRSF006004 1 345 2.9E-131 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 Gene3D G3DSA:1.10.150.530 2 61 1.1E-16 T 12-10-2018 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 Pfam PF13394 4Fe-4S single cluster domain 109 199 8.5E-8 T 12-10-2018 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 337 6.7E-128 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 Pfam PF04055 Radical SAM superfamily 104 265 2.4E-21 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c13700 58b76e2c8030c2d45cbf7624ea92fe71 347 SUPERFAMILY SSF102114 94 299 3.53E-15 T 12-10-2018 CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 Pfam PF00005 ABC transporter 335 466 8.7E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 Gene3D G3DSA:3.40.50.300 283 528 6.6E-40 T 12-10-2018 CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 SUPERFAMILY SSF52540 6 237 2.39E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 SUPERFAMILY SSF52540 296 514 2.9E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 Pfam PF00005 ABC transporter 18 184 6.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 Gene3D G3DSA:3.40.50.300 1 279 1.5E-61 T 12-10-2018 CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 SMART SM00382 26 231 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c00350 f510c9b7b3bf0fb3d602d5c6a77f6fca 529 Pfam PF12848 ABC transporter 224 303 2.4E-20 T 12-10-2018 IPR032781 ABC-transporter extension domain CLSA_c40720 8203654dfa49b966c819523b5ad4dff0 211 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c40720 8203654dfa49b966c819523b5ad4dff0 211 Gene3D G3DSA:3.40.50.300 10 211 3.5E-51 T 12-10-2018 CLSA_c40720 8203654dfa49b966c819523b5ad4dff0 211 SUPERFAMILY SSF52540 1 207 1.01E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40720 8203654dfa49b966c819523b5ad4dff0 211 SMART SM00382 21 204 5.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40720 8203654dfa49b966c819523b5ad4dff0 211 Pfam PF00005 ABC transporter 21 155 2.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c30910 c0330ca63ffceadb9ee069d775012662 261 PIRSF PIRSF029755 1 261 1.2E-119 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 CLSA_c30910 c0330ca63ffceadb9ee069d775012662 261 Pfam PF07286 Protein of unknown function (DUF1445) 111 253 2.3E-68 T 12-10-2018 IPR009906 D-glutamate cyclase CLSA_c30910 c0330ca63ffceadb9ee069d775012662 261 SUPERFAMILY SSF160920 2 255 1.09E-113 T 12-10-2018 IPR038021 Putative hydro-lyase CLSA_c30910 c0330ca63ffceadb9ee069d775012662 261 Hamap MF_01830 Putative hydro-lyase . 7 261 52.162 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 CLSA_c30910 c0330ca63ffceadb9ee069d775012662 261 Gene3D G3DSA:3.30.2040.10 121 233 4.1E-94 T 12-10-2018 CLSA_c30910 c0330ca63ffceadb9ee069d775012662 261 Gene3D G3DSA:3.40.1640.10 16 249 4.1E-94 T 12-10-2018 CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 Gene3D G3DSA:3.40.50.200 96 558 1.0E-147 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 PRINTS PR00723 Subtilisin serine protease family (S8) signature 498 514 8.1E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 PRINTS PR00723 Subtilisin serine protease family (S8) signature 175 188 8.1E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 PRINTS PR00723 Subtilisin serine protease family (S8) signature 99 118 8.1E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 SUPERFAMILY SSF52743 80 568 5.76E-46 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 104 115 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 179 189 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 Gene3D G3DSA:2.60.120.1290 295 438 1.0E-147 T 12-10-2018 CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 Pfam PF00082 Subtilase family 99 557 4.8E-20 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c07320 07a52a53a8d151e4e29e4f0b59aeea2e 603 PIRSF PIRSF037894 2 570 1.6E-251 T 12-10-2018 IPR017310 Peptidase S8A, subtilisin-related, clostridia CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 164.48 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 9.5E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 SUPERFAMILY SSF52540 20 251 1.77E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 326 1.0E-31 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 Gene3D G3DSA:3.40.50.300 20 181 3.3E-43 T 12-10-2018 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 Gene3D G3DSA:1.10.10.10 257 335 4.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 1.4E-143 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 SUPERFAMILY SSF46785 257 326 2.99E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 Gene3D G3DSA:1.10.8.60 182 255 3.1E-30 T 12-10-2018 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 2.0E-117 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CLSA_c28780 6cafd22d3828339ce87d909243c1825d 346 SMART SM00382 51 182 2.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c04840 e650faac2c352a99e60a90fabb262783 286 Pfam PF05582 YabG peptidase U57 3 281 7.9E-119 T 12-10-2018 IPR008764 Peptidase U57, YabG CLSA_c04840 e650faac2c352a99e60a90fabb262783 286 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 3 282 1.0E-119 T 12-10-2018 IPR008764 Peptidase U57, YabG CLSA_c04840 e650faac2c352a99e60a90fabb262783 286 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 1 274 5.0E-104 T 12-10-2018 IPR008764 Peptidase U57, YabG CLSA_c04840 e650faac2c352a99e60a90fabb262783 286 PIRSF PIRSF011575 1 286 4.7E-141 T 12-10-2018 IPR008764 Peptidase U57, YabG CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 Pfam PF02637 GatB domain 326 472 2.2E-49 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 38.289 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 Pfam PF02934 GatB/GatE catalytic domain 6 287 2.7E-112 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 SMART SM00845 326 473 3.3E-68 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 Gene3D G3DSA:1.10.10.410 414 476 3.3E-23 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 SUPERFAMILY SSF55931 5 294 1.24E-118 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 SUPERFAMILY SSF89095 295 400 3.27E-32 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 Gene3D G3DSA:1.10.150.380 298 411 4.8E-37 T 12-10-2018 CLSA_c03860 cf6e4d4ee98d580e8eb19a64725117d0 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 2.5E-177 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CLSA_c24070 f0c84458133c5a9e1cf2a276da5a8e86 129 PIRSF PIRSF014972 2 129 2.4E-44 T 12-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase CLSA_c24070 f0c84458133c5a9e1cf2a276da5a8e86 129 SUPERFAMILY SSF54637 1 126 4.74E-41 T 12-10-2018 IPR029069 HotDog domain superfamily CLSA_c24070 f0c84458133c5a9e1cf2a276da5a8e86 129 Gene3D G3DSA:3.10.129.10 1 128 5.8E-42 T 12-10-2018 CLSA_c24070 f0c84458133c5a9e1cf2a276da5a8e86 129 Pfam PF03061 Thioesterase superfamily 39 106 4.2E-5 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 Gene3D G3DSA:3.40.50.300 1 241 5.9E-41 T 12-10-2018 CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 Gene3D G3DSA:3.40.50.300 293 552 7.2E-51 T 12-10-2018 CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 506 2.9E-20 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 SUPERFAMILY SSF52540 1 217 1.42E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.7E-149 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 SUPERFAMILY SSF52540 2 504 6.78E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c26800 4d211c64c7134ca5de769f4e809c1097 562 PIRSF PIRSF003128 1 556 1.9E-160 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 SUPERFAMILY SSF47413 3 60 1.31E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 SUPERFAMILY SSF53822 61 331 2.75E-82 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c00630 be15a381ee284df23effd840784de1b5 332 SMART SM00354 2 72 2.6E-39 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 Gene3D G3DSA:1.10.260.40 1 60 1.8E-25 T 12-10-2018 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.1E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.1E-34 T 12-10-2018 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 Gene3D G3DSA:3.40.50.2300 63 310 2.1E-78 T 12-10-2018 CLSA_c00630 be15a381ee284df23effd840784de1b5 332 Gene3D G3DSA:3.40.50.2300 161 291 2.1E-78 T 12-10-2018 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 PIRSF PIRSF001535 1 566 4.6E-258 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 454 3.3E-50 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Gene3D G3DSA:3.30.930.10 11 460 6.3E-258 T 12-10-2018 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 41.176 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 556 8.7E-228 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Gene3D G3DSA:3.40.50.800 3 545 6.3E-258 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 6.9E-29 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 SUPERFAMILY SSF55681 10 473 1.38E-102 T 12-10-2018 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 SUPERFAMILY SSF52954 458 563 1.09E-28 T 12-10-2018 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Pfam PF03129 Anticodon binding domain 471 560 7.2E-17 T 12-10-2018 IPR004154 Anticodon-binding CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 Gene3D G3DSA:3.90.960.10 240 384 6.3E-258 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 9.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 9.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 9.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 9.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLSA_c01790 475be9c2342eaa6f634b1a124e0bbdc4 570 SUPERFAMILY SSF55826 218 377 9.55E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c25130 49b527e537c2c53f82ec6eb889850331 385 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 271 376 9.6E-24 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c25130 49b527e537c2c53f82ec6eb889850331 385 SUPERFAMILY SSF102114 52 370 4.05E-37 T 12-10-2018 CLSA_c25130 49b527e537c2c53f82ec6eb889850331 385 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 19 384 2.2E-152 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CLSA_c25130 49b527e537c2c53f82ec6eb889850331 385 Gene3D G3DSA:3.20.20.70 22 382 3.8E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c25130 49b527e537c2c53f82ec6eb889850331 385 SMART SM00876 271 377 2.7E-28 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Gene3D G3DSA:3.30.565.10 450 616 4.8E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SMART SM00388 375 447 1.8E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Pfam PF02743 Cache domain 40 266 4.7E-26 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SUPERFAMILY SSF103190 101 167 9.94E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Gene3D G3DSA:1.10.287.130 361 449 3.9E-17 T 12-10-2018 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 4.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 544 4.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 558 4.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 4.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SUPERFAMILY SSF158472 306 358 2.09E-5 T 12-10-2018 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 604 5.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SMART SM00387 493 605 1.4E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SMART SM00304 304 359 3.5E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SUPERFAMILY SSF55874 436 609 6.42E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Gene3D G3DSA:3.30.450.20 139 270 2.1E-25 T 12-10-2018 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 SUPERFAMILY SSF47384 365 447 6.47E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 447 3.2E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c24860 ecaa766c4a0e48b2c0ef491099c741f6 635 Gene3D G3DSA:1.20.1480.50 271 360 6.0E-13 T 12-10-2018 CLSA_c05900 488e138a747e38d2264fffe0a7783e0f 355 Pfam PF03060 Nitronate monooxygenase 14 351 6.6E-57 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLSA_c05900 488e138a747e38d2264fffe0a7783e0f 355 Gene3D G3DSA:3.20.20.70 9 355 6.1E-76 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c05900 488e138a747e38d2264fffe0a7783e0f 355 SUPERFAMILY SSF51412 5 349 1.4E-57 T 12-10-2018 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 Pfam PF02743 Cache domain 66 269 2.9E-26 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 Gene3D G3DSA:3.30.450.20 186 275 1.7E-24 T 12-10-2018 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 SUPERFAMILY SSF103190 71 195 1.06E-8 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 SUPERFAMILY SSF58104 341 665 4.05E-61 T 12-10-2018 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 Gene3D G3DSA:1.10.287.950 358 665 9.2E-64 T 12-10-2018 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 Gene3D G3DSA:3.30.450.20 98 185 1.7E-24 T 12-10-2018 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 SMART SM00304 308 361 3.5E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 SMART SM00283 390 665 1.9E-61 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c11980 0a710543d455264c55c391f5acab77ba 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 617 1.8E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 TIGRFAM TIGR00763 lon: endopeptidase La 8 767 2.4E-286 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 SUPERFAMILY SSF52540 305 586 4.76E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c31200 b0dc0aa79579dac93871346195240801 775 PIRSF PIRSF001174 1 771 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 SMART SM00464 6 198 3.0E-50 T 12-10-2018 IPR003111 Lon, substrate-binding domain CLSA_c31200 b0dc0aa79579dac93871346195240801 775 SUPERFAMILY SSF54211 591 766 7.97E-54 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c31200 b0dc0aa79579dac93871346195240801 775 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 672 680 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Gene3D G3DSA:3.30.230.10 589 775 2.0E-80 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 197 3.0E-35 T 12-10-2018 IPR003111 Lon, substrate-binding domain CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 566 768 8.3E-93 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 SMART SM00382 344 489 6.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Gene3D G3DSA:1.20.58.1480 116 241 4.6E-31 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 348 485 1.6E-22 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 SUPERFAMILY SSF88697 6 197 1.37E-33 T 12-10-2018 IPR015947 PUA-like superfamily CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Hamap MF_01973 Lon protease [lon]. 7 768 64.298 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Gene3D G3DSA:3.40.50.300 310 487 8.6E-65 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Gene3D G3DSA:2.30.130.40 4 112 6.6E-30 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 Gene3D G3DSA:1.10.8.60 488 580 8.6E-25 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 699 718 5.3E-54 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 591 607 5.3E-54 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 740 5.3E-54 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 5.3E-54 T 12-10-2018 CLSA_c31200 b0dc0aa79579dac93871346195240801 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 669 688 5.3E-54 T 12-10-2018 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 SUPERFAMILY SSF55874 375 546 1.22E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 SUPERFAMILY SSF55785 172 296 3.66E-19 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Gene3D G3DSA:3.30.450.20 174 295 4.3E-23 T 12-10-2018 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 SMART SM00387 432 544 1.8E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 541 6.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 6.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 6.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 522 6.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Pfam PF10114 Sensory domain found in PocR 6 167 3.8E-40 T 12-10-2018 IPR018771 PocR domain CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 SMART SM00388 316 386 1.9E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Gene3D G3DSA:1.10.287.130 308 389 9.2E-19 T 12-10-2018 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 385 2.4E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 306 5.5E-17 T 12-10-2018 IPR000014 PAS domain CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 SUPERFAMILY SSF47384 305 385 3.92E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Pfam PF13426 PAS domain 196 296 1.6E-11 T 12-10-2018 IPR000014 PAS domain CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 542 1.4E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 Gene3D G3DSA:3.30.565.10 390 554 6.7E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32660 01d3b44fd09cfc39c4ef827d30906197 578 SMART SM00091 185 251 7.4E-10 T 12-10-2018 IPR000014 PAS domain CLSA_c24670 578bb66e69c671c9ce711d9176748305 296 Gene3D G3DSA:3.60.15.10 1 251 5.5E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c24670 578bb66e69c671c9ce711d9176748305 296 Pfam PF00753 Metallo-beta-lactamase superfamily 26 207 4.3E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c24670 578bb66e69c671c9ce711d9176748305 296 SUPERFAMILY SSF56281 4 253 8.12E-34 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c24670 578bb66e69c671c9ce711d9176748305 296 SMART SM00849 19 207 4.4E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c37960 295f7e46803ba004c27c431e81975678 410 ProSitePatterns PS00201 Flavodoxin signature. 253 269 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLSA_c37960 295f7e46803ba004c27c431e81975678 410 SMART SM00849 34 223 3.5E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c37960 295f7e46803ba004c27c431e81975678 410 Gene3D G3DSA:3.40.50.360 250 403 1.2E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c37960 295f7e46803ba004c27c431e81975678 410 SUPERFAMILY SSF56281 10 278 3.14E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c37960 295f7e46803ba004c27c431e81975678 410 Gene3D G3DSA:3.60.15.10 1 243 1.9E-84 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c37960 295f7e46803ba004c27c431e81975678 410 PIRSF PIRSF005243 1 407 1.2E-127 T 12-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLSA_c37960 295f7e46803ba004c27c431e81975678 410 SUPERFAMILY SSF52218 248 366 1.4E-28 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c37960 295f7e46803ba004c27c431e81975678 410 Pfam PF00258 Flavodoxin 253 350 5.5E-9 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c37960 295f7e46803ba004c27c431e81975678 410 Pfam PF00753 Metallo-beta-lactamase superfamily 35 168 5.3E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c45340 235210fedaceb630cca5470369dc6c2a 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 22.674 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLSA_c45340 235210fedaceb630cca5470369dc6c2a 95 SUPERFAMILY SSF54995 1 92 2.75E-34 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45340 235210fedaceb630cca5470369dc6c2a 95 Gene3D G3DSA:3.30.70.60 1 95 8.5E-34 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLSA_c45340 235210fedaceb630cca5470369dc6c2a 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 6.1E-28 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45340 235210fedaceb630cca5470369dc6c2a 95 Pfam PF01250 Ribosomal protein S6 3 91 2.7E-31 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 300 3.0E-132 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 Gene3D G3DSA:3.40.50.450 3 287 5.4E-112 T 12-10-2018 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PIRSF PIRSF000532 1 319 2.2E-122 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 Gene3D G3DSA:3.40.50.460 142 252 5.4E-112 T 12-10-2018 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 SUPERFAMILY SSF53784 1 317 3.14E-115 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 Pfam PF00365 Phosphofructokinase 3 275 3.1E-108 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 2.3E-86 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c42910 f4ae401288b98de3c3cf5dc8c97b4a53 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 319 46.947 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 SMART SM00382 12 234 3.4 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 SMART SM00382 325 520 0.24 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 Pfam PF02374 Anion-transporting ATPase 13 294 3.3E-78 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 Pfam PF02374 Anion-transporting ATPase 327 468 2.8E-32 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 Pfam PF02374 Anion-transporting ATPase 481 557 5.7E-7 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 17 295 3.8E-80 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 Gene3D G3DSA:3.40.50.300 10 297 1.1E-78 T 12-10-2018 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 SUPERFAMILY SSF52540 311 543 2.17E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 Gene3D G3DSA:3.40.50.300 309 579 1.3E-62 T 12-10-2018 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 12 570 8.5E-259 T 12-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 PIRSF PIRSF001327 2 581 2.4E-270 T 12-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CLSA_c16730 450208353fb7e6f62ac384d480c7e2fd 581 SUPERFAMILY SSF52540 14 292 2.78E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c24100 c747fc6a6474cf7052d6924b10e217e8 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 270 3.1E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c24100 c747fc6a6474cf7052d6924b10e217e8 283 Gene3D G3DSA:1.10.3720.10 86 280 2.1E-25 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c24100 c747fc6a6474cf7052d6924b10e217e8 283 SUPERFAMILY SSF161098 90 268 9.42E-25 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 319 393 9.1E-29 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 PIRSF PIRSF001604 2 663 3.3E-230 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Pfam PF14520 Helix-hairpin-helix domain 442 496 2.2E-5 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SMART SM00532 2 443 3.2E-167 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 316 1.9E-90 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Pfam PF12826 Helix-hairpin-helix motif 506 568 1.2E-23 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SUPERFAMILY SSF50249 316 393 1.46E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Gene3D G3DSA:1.10.287.610 2 68 3.6E-17 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Hamap MF_01588 DNA ligase [ligA]. 1 661 45.532 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Gene3D G3DSA:1.10.150.20 427 500 3.2E-23 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Gene3D G3DSA:3.40.50.10190 579 662 1.7E-27 T 12-10-2018 IPR036420 BRCT domain superfamily CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SMART SM00292 587 663 3.9E-15 T 12-10-2018 IPR001357 BRCT domain CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Gene3D G3DSA:1.10.150.20 501 578 9.8E-23 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SMART SM00278 441 460 0.51 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SMART SM00278 539 558 120.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SMART SM00278 507 526 230.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SMART SM00278 475 494 0.18 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SUPERFAMILY SSF47781 401 577 3.0E-54 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Gene3D G3DSA:3.30.470.90 69 316 5.0E-73 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 657 6.6E-211 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SUPERFAMILY SSF56091 3 313 3.36E-95 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Gene3D G3DSA:2.40.50.140 317 402 6.8E-29 T 12-10-2018 CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 SUPERFAMILY SSF52113 588 661 3.43E-21 T 12-10-2018 IPR036420 BRCT domain superfamily CLSA_c03820 505f84e71dd55d9c5deec59edb6f64ef 663 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 587 659 8.8E-17 T 12-10-2018 IPR001357 BRCT domain CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 PIRSF PIRSF004762 18 342 3.7E-78 T 12-10-2018 CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 Pfam PF04055 Radical SAM superfamily 75 231 6.4E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 248 328 2.5E-5 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 26 353 1.7E-118 T 12-10-2018 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 SMART SM00729 71 275 1.1E-33 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 SUPERFAMILY SSF102114 38 310 7.32E-64 T 12-10-2018 CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 SMART SM00876 244 334 6.1E-4 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c03330 6ed0fe4dfcd9a87dfd8d415d06bb34ac 372 Gene3D G3DSA:3.20.20.70 16 365 4.7E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 SMART SM00919 263 517 3.2E-102 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 Pfam PF03949 Malic enzyme, NAD binding domain 263 517 1.3E-96 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 SUPERFAMILY SSF51735 263 544 1.58E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 Pfam PF00390 Malic enzyme, N-terminal domain 71 253 8.4E-68 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 Gene3D G3DSA:3.40.50.10380 4 260 8.1E-98 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PIRSF PIRSF000106 1 545 6.7E-207 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 SUPERFAMILY SSF53223 3 262 7.12E-97 T 12-10-2018 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 175 197 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 234 252 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 139 168 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 290 306 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 395 411 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 76 100 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 PRINTS PR00072 Malic enzyme signature 259 275 1.4E-66 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 SMART SM01274 70 253 2.9E-83 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c28840 708654cb7d6689248440a2201f1d4fed 545 Gene3D G3DSA:3.40.50.720 261 545 1.8E-96 T 12-10-2018 CLSA_c04720 b8679a1a8182fca6205caab8d19970fd 228 SUPERFAMILY SSF103084 12 126 2.22E-20 T 12-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 CLSA_c04720 b8679a1a8182fca6205caab8d19970fd 228 Pfam PF05866 Endodeoxyribonuclease RusA 11 124 6.6E-17 T 12-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 CLSA_c04720 b8679a1a8182fca6205caab8d19970fd 228 Gene3D G3DSA:3.30.1330.70 14 129 1.0E-6 T 12-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 CLSA_c21090 1924b8daf9c880a00d98bd339b637614 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 1.4E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c21090 1924b8daf9c880a00d98bd339b637614 312 Gene3D G3DSA:1.10.3720.10 87 299 1.0E-23 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c21090 1924b8daf9c880a00d98bd339b637614 312 SUPERFAMILY SSF161098 93 294 2.88E-18 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c29990 0974c524f1b05919fad943e92fb594ad 199 Pfam PF00239 Resolvase, N terminal domain 3 148 5.3E-31 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c29990 0974c524f1b05919fad943e92fb594ad 199 SMART SM00857 3 148 9.7E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c29990 0974c524f1b05919fad943e92fb594ad 199 SUPERFAMILY SSF53041 1 148 4.84E-35 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CLSA_c29990 0974c524f1b05919fad943e92fb594ad 199 Gene3D G3DSA:3.40.50.1390 2 130 7.5E-35 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 954 1430 1.0E-5 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 28 252 3.58E-16 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1239 1268 7.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1400 1429 7.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1352 1381 7.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 478 603 9.0E-6 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 537 632 1.88E-7 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 1147 1358 2.62E-10 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 629 887 1.12E-64 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 130 260 3.6E-9 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 604 885 9.1E-69 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 1226 1351 5.3E-6 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 12 129 6.7E-6 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 1352 1473 9.3E-10 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Gene3D G3DSA:1.10.287.950 328 477 2.8E-6 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 1352 1471 5.1E-8 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SMART SM00283 623 884 1.2E-73 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 863 1051 6.28E-8 T 12-10-2018 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 696 850 2.9E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c23270 4d52a35afc3477c80fa56ac1a76d151e 1473 SUPERFAMILY SSF58104 257 512 3.75E-11 T 12-10-2018 CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 Gene3D G3DSA:3.30.230.10 8 169 2.9E-5 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 395 3.7E-73 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 498 3.2E-24 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 Gene3D G3DSA:3.40.50.300 192 502 5.4E-50 T 12-10-2018 CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 SUPERFAMILY SSF54211 5 168 9.1E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 498 8.7E-154 T 12-10-2018 IPR004482 Mg chelatase-related protein CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 SUPERFAMILY SSF52540 189 498 5.5E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 2.5E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 2.5E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 2.5E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 2.5E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 SMART SM00382 211 392 3.7E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c14060 3cd49925df9c0085173fc1e13be869c8 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 1.8E-45 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 980 1038 1.5E-20 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 SUPERFAMILY SSF69360 737 905 9.42E-51 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 SUPERFAMILY SSF69360 878 1051 2.16E-52 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 613 657 2.9E-10 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 473 612 1.4E-27 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 SUPERFAMILY SSF69360 516 717 2.83E-43 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 963 981 1.5E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1066 1083 1.4E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1085 1103 0.0056 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1003 1021 1.9E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1107 1121 0.007 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 587 606 1.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 631 650 2.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 819 837 4.2E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 779 797 2.2E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 566 584 2.4E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 983 1001 2.4E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 799 817 2.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 842 858 3.6E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 880 898 8.5E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 903 919 9.8E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 610 628 5.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1045 1060 0.0034 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1127 1145 0.0024 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 543 562 2.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 921 939 0.053 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 676 694 4.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 521 540 1.2E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 1147 1165 0.0012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF01473 Putative cell wall binding repeat 654 672 2.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 SUPERFAMILY SSF69360 1034 1185 1.26E-44 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Pfam PF05954 Phage late control gene D protein (GPD) 79 178 3.7E-6 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 1039 1103 5.2E-18 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 1104 1183 4.8E-25 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 749 789 6.7E-7 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 790 847 3.1E-22 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 910 979 2.3E-21 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.10.270.10 848 909 2.7E-19 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 SUPERFAMILY SSF69279 6 184 8.5E-19 T 12-10-2018 CLSA_c08180 6511196eeb9886fb151773f6b4de19f6 1435 Gene3D G3DSA:2.20.120.10 658 705 6.3E-10 T 12-10-2018 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 Gene3D G3DSA:3.30.420.40 158 336 6.5E-116 T 12-10-2018 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 Pfam PF00012 Hsp70 protein 76 473 3.0E-92 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 SUPERFAMILY SSF100920 368 468 2.88E-15 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 Gene3D G3DSA:3.30.420.40 5 346 6.5E-116 T 12-10-2018 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 SUPERFAMILY SSF53067 159 349 1.12E-49 T 12-10-2018 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 Gene3D G3DSA:3.90.640.10 197 279 6.5E-116 T 12-10-2018 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 165 178 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 SUPERFAMILY SSF53067 1 157 1.19E-49 T 12-10-2018 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 171 181 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 52 60 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 30 42 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 451 467 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 304 320 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 334 354 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 PRINTS PR00301 70kDa heat shock protein signature 112 132 6.2E-35 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 Gene3D G3DSA:2.60.34.10 357 483 1.9E-13 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c06650 ec1b261691fd1542394660349a0878ff 514 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 SUPERFAMILY SSF55031 186 291 3.4E-32 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 Gene3D G3DSA:3.30.70.360 183 297 3.4E-130 T 12-10-2018 CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 SUPERFAMILY SSF53187 5 382 1.29E-80 T 12-10-2018 CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 PIRSF PIRSF005962 1 385 3.4E-126 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 Gene3D G3DSA:3.40.630.10 18 367 3.4E-130 T 12-10-2018 CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 Pfam PF07687 Peptidase dimerisation domain 187 283 3.0E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 368 4.0E-121 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 CLSA_c42820 fc8a1fedafc095fbc2c69d720d483f7f 391 Pfam PF01546 Peptidase family M20/M25/M40 76 379 3.7E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 8.0E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 8.0E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 Gene3D G3DSA:3.40.50.300 2 175 5.6E-43 T 12-10-2018 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 SUPERFAMILY SSF52540 2 161 1.6E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 194 555 2.1E-117 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 Pfam PF02421 Ferrous iron transport protein B 2 152 3.6E-60 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 Pfam PF07670 Nucleoside recognition 277 367 7.4E-15 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 Pfam PF07670 Nucleoside recognition 438 558 2.3E-31 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLSA_c26010 4ff951be279624a0622e9e010bfe4eca 587 Pfam PF07664 Ferrous iron transport protein B C terminus 382 433 1.0E-16 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLSA_c37240 b56442c8e69b072e5b943063f964891e 357 Gene3D G3DSA:3.40.50.2300 54 333 1.8E-84 T 12-10-2018 CLSA_c37240 b56442c8e69b072e5b943063f964891e 357 Gene3D G3DSA:3.40.50.2300 157 308 1.8E-84 T 12-10-2018 CLSA_c37240 b56442c8e69b072e5b943063f964891e 357 SUPERFAMILY SSF53822 47 352 1.04E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c37240 b56442c8e69b072e5b943063f964891e 357 Pfam PF13407 Periplasmic binding protein domain 49 326 5.9E-44 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c36610 074b2d55eba29f6f10b5a6e61baa2ee0 322 Pfam PF13599 Pentapeptide repeats (9 copies) 237 307 7.2E-12 T 12-10-2018 IPR001646 Pentapeptide repeat CLSA_c36610 074b2d55eba29f6f10b5a6e61baa2ee0 322 SUPERFAMILY SSF141571 217 305 3.53E-17 T 12-10-2018 CLSA_c36610 074b2d55eba29f6f10b5a6e61baa2ee0 322 Gene3D G3DSA:2.160.20.100 174 319 6.3E-17 T 12-10-2018 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 775 1115 3.9E-61 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 SUPERFAMILY SSF52540 290 731 1.81E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Gene3D G3DSA:3.40.50.300 516 682 4.9E-42 T 12-10-2018 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Gene3D G3DSA:3.40.50.300 278 383 1.6E-29 T 12-10-2018 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 SUPERFAMILY SSF52540 4 224 3.14E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 308 407 1.1E-5 T 12-10-2018 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1143 0.0 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Gene3D G3DSA:3.40.50.300 1 155 3.8E-26 T 12-10-2018 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Gene3D G3DSA:3.40.50.300 156 270 1.4E-21 T 12-10-2018 CLSA_c00230 8ff0b35ca739fcb1bee6d2aa9ec975d8 1166 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1146 58.498 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 SUPERFAMILY SSF50331 257 329 1.7E-6 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 SMART SM00382 27 210 1.0E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 SUPERFAMILY SSF52540 3 239 1.0E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 4 237 7.6E-108 T 12-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 Gene3D G3DSA:3.40.50.300 1 237 2.9E-78 T 12-10-2018 CLSA_c38960 06d98f502c35390bec1da9cc09fc1079 355 Pfam PF00005 ABC transporter 19 161 7.5E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 7 262 1.7E-72 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 Gene3D G3DSA:3.20.20.70 2 288 3.7E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 SUPERFAMILY SSF51366 5 283 2.1E-75 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 19 264 2.1E-28 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 SMART SM00934 18 268 1.8E-39 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 94 107 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12480 12836ed88e20bb02cc3a6238c35a3fb4 290 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 4 285 38.17 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c13310 9004f7b00c236c7e5fe31e28a4637180 154 Pfam PF01475 Ferric uptake regulator family 18 141 1.1E-36 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLSA_c13310 9004f7b00c236c7e5fe31e28a4637180 154 Gene3D G3DSA:3.30.1490.190 96 153 1.7E-19 T 12-10-2018 CLSA_c13310 9004f7b00c236c7e5fe31e28a4637180 154 SUPERFAMILY SSF46785 12 145 2.73E-40 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c13310 9004f7b00c236c7e5fe31e28a4637180 154 Gene3D G3DSA:1.10.10.10 5 92 6.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 SMART SM00418 10 91 4.5E-28 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 2.6E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 2.6E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.6E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 2.6E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 Gene3D G3DSA:1.10.10.10 1 98 3.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 Pfam PF01022 Bacterial regulatory protein, arsR family 17 62 1.7E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 33 51 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLSA_c16710 56d35d1b149867a6c3155e97620d6928 107 SUPERFAMILY SSF46785 2 87 5.28E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c13510 8e8ff7e3db3826a6891ade66ad3ebea7 294 Gene3D G3DSA:1.10.3720.10 50 290 3.7E-27 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c13510 8e8ff7e3db3826a6891ade66ad3ebea7 294 SUPERFAMILY SSF161098 17 277 2.34E-35 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c13510 8e8ff7e3db3826a6891ade66ad3ebea7 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 287 2.2E-77 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CLSA_c13510 8e8ff7e3db3826a6891ade66ad3ebea7 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 285 1.2E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Gene3D G3DSA:3.40.50.300 1 204 1.6E-70 T 12-10-2018 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Pfam PF00271 Helicase conserved C-terminal domain 217 325 6.8E-20 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Gene3D G3DSA:1.10.10.10 337 512 8.0E-44 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SMART SM00490 245 326 3.3E-25 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SMART SM00487 16 211 2.2E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Pfam PF09382 RQC domain 403 508 5.3E-28 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SUPERFAMILY SSF46785 398 519 1.21E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Gene3D G3DSA:3.40.50.300 205 335 1.1E-39 T 12-10-2018 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 11 458 3.2E-142 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Gene3D G3DSA:1.10.150.80 513 593 2.2E-22 T 12-10-2018 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SMART SM00956 407 510 5.3E-33 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SUPERFAMILY SSF52540 60 347 3.28E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07400 f1251577911ece220f75c13a8506302c 593 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 10 584 6.8E-204 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SUPERFAMILY SSF47819 517 589 9.81E-20 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Pfam PF16124 RecQ zinc-binding 338 400 2.9E-15 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CLSA_c07400 f1251577911ece220f75c13a8506302c 593 SMART SM00341 514 593 5.7E-12 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Pfam PF00270 DEAD/DEAH box helicase 23 183 6.7E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c07400 f1251577911ece220f75c13a8506302c 593 Pfam PF00570 HRDC domain 518 584 2.4E-21 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 Gene3D G3DSA:3.40.50.300 6 438 1.0E-207 T 12-10-2018 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 49.298 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 Gene3D G3DSA:3.30.1510.10 129 247 1.0E-207 T 12-10-2018 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 SUPERFAMILY SSF52540 4 554 3.23E-248 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 Gene3D G3DSA:3.10.410.10 443 532 3.1E-35 T 12-10-2018 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 9.6E-272 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLSA_c01390 a666de710c129a758022e0e9f46afaca 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 Pfam PF03734 L,D-transpeptidase catalytic domain 344 463 2.5E-17 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 Pfam PF12229 Putative peptidoglycan binding domain 207 324 1.5E-19 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 Pfam PF12229 Putative peptidoglycan binding domain 80 194 1.2E-12 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 SUPERFAMILY SSF143985 216 337 2.35E-38 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 Gene3D G3DSA:2.40.440.10 343 465 9.9E-39 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 Gene3D G3DSA:1.10.269.20 216 340 5.5E-38 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c14890 149ea3b9e9b95e290b487e031b13eb27 467 SUPERFAMILY SSF141523 341 464 2.35E-29 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 367 37.077 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 Gene3D G3DSA:3.40.50.12740 5 171 2.4E-30 T 12-10-2018 CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 SMART SM00448 5 129 1.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 SUPERFAMILY SSF52738 176 366 1.23E-54 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 SUPERFAMILY SSF52172 4 111 5.69E-28 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 Pfam PF00072 Response regulator receiver domain 7 111 9.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 Pfam PF01339 CheB methylesterase 181 362 2.6E-54 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 PIRSF PIRSF000876 2 369 2.3E-122 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c20400 41c70b750a20758bb6be17843cd32c3c 369 Gene3D G3DSA:3.40.50.180 174 366 1.2E-59 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 PIRSF PIRSF000102 3 316 4.2E-102 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 1.2E-109 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 3.3E-39 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 SUPERFAMILY SSF56327 146 313 4.18E-53 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 312 8.3E-28 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 Gene3D G3DSA:3.40.50.720 2 146 5.5E-51 T 12-10-2018 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 Gene3D G3DSA:3.90.110.10 147 315 1.2E-55 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 SUPERFAMILY SSF51735 3 147 2.13E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 7.1E-38 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 7.1E-38 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 7.1E-38 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 7.1E-38 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 7.1E-38 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c31640 4d231c1e43070358867326fd2c15535a 316 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 315 40.045 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 Pfam PF13353 4Fe-4S single cluster domain 18 121 1.3E-10 T 12-10-2018 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 Gene3D G3DSA:3.20.20.70 1 326 3.4E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 326 5.7E-109 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 326 35.723 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 305 5.9E-34 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 SMART SM00729 10 211 5.4E-12 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 Pfam PF04055 Radical SAM superfamily 14 172 1.3E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c26440 71bee55789e189141351f0a855775a5c 326 SUPERFAMILY SSF102114 2 275 1.22E-69 T 12-10-2018 CLSA_c04670 4cb36b075bd67187d2d90f5b900bd95e 447 Gene3D G3DSA:3.30.2290.10 1 215 8.0E-64 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CLSA_c04670 4cb36b075bd67187d2d90f5b900bd95e 447 SUPERFAMILY SSF111283 7 447 8.89E-109 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CLSA_c04670 4cb36b075bd67187d2d90f5b900bd95e 447 Pfam PF01523 Putative modulator of DNA gyrase 21 310 1.2E-50 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CLSA_c00570 f829a43333fb2cd7e8d9bf815c0f1ab1 70 Gene3D G3DSA:1.10.10.1100 4 70 2.1E-17 T 12-10-2018 CLSA_c00570 f829a43333fb2cd7e8d9bf815c0f1ab1 70 Pfam PF04324 BFD-like [2Fe-2S] binding domain 17 66 9.3E-15 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 SUPERFAMILY SSF55973 121 240 1.57E-53 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 SUPERFAMILY SSF55973 2 108 9.03E-49 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Pfam PF02772 S-adenosylmethionine synthetase, central domain 123 239 4.9E-51 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 124 134 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 7.4E-45 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 391 57.771 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 PIRSF PIRSF000497 1 391 2.5E-177 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Gene3D G3DSA:3.30.300.10 10 278 5.5E-179 T 12-10-2018 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 267 275 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 241 380 3.2E-70 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Gene3D G3DSA:3.30.300.10 101 382 5.5E-179 T 12-10-2018 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 SUPERFAMILY SSF55973 241 390 9.81E-69 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 Gene3D G3DSA:3.30.300.10 4 241 5.5E-179 T 12-10-2018 CLSA_c05320 c806c7641d2e58656edfc48d3c005ce6 391 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 390 3.3E-185 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLSA_c06700 d76973992db10be6cb3676b921dfcced 235 Gene3D G3DSA:3.40.50.300 1 233 3.2E-47 T 12-10-2018 CLSA_c06700 d76973992db10be6cb3676b921dfcced 235 SUPERFAMILY SSF52540 3 210 2.55E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06700 d76973992db10be6cb3676b921dfcced 235 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c06700 d76973992db10be6cb3676b921dfcced 235 Pfam PF00005 ABC transporter 18 159 4.7E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c06700 d76973992db10be6cb3676b921dfcced 235 SMART SM00382 27 206 2.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Pfam PF02151 UvrB/uvrC motif 205 238 3.8E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 SUPERFAMILY SSF46600 191 243 4.58E-13 T 12-10-2018 IPR036876 UVR domain superfamily CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 SUPERFAMILY SSF82771 13 98 6.02E-25 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 551 5.9E-55 T 12-10-2018 IPR001162 UvrC family homology region CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 616 28.753 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Gene3D G3DSA:4.10.860.10 196 240 1.3E-5 T 12-10-2018 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Gene3D G3DSA:3.40.1440.10 3 100 6.3E-35 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Pfam PF01541 GIY-YIG catalytic domain 15 91 1.1E-10 T 12-10-2018 IPR000305 GIY-YIG endonuclease CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 598 3.7E-184 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Gene3D G3DSA:1.10.150.20 559 617 6.1E-19 T 12-10-2018 CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 SMART SM00465 14 96 9.0E-27 T 12-10-2018 IPR000305 GIY-YIG endonuclease CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Gene3D G3DSA:3.30.420.340 379 558 4.1E-58 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 SUPERFAMILY SSF47781 528 619 2.48E-21 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c42990 119fe5282e205d2e8d70506bad7b0d15 629 Pfam PF12826 Helix-hairpin-helix motif 570 621 1.3E-10 T 12-10-2018 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 603 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SUPERFAMILY SSF47226 174 292 1.24E-9 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SUPERFAMILY SSF47384 351 419 5.89E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SUPERFAMILY SSF47226 9 111 7.59E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Gene3D G3DSA:1.20.120.160 8 137 2.7E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SMART SM00260 598 740 1.1E-18 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SUPERFAMILY SSF50341 605 740 1.83E-22 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SMART SM00387 463 606 8.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Gene3D G3DSA:1.20.120.160 172 333 3.9E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Gene3D G3DSA:1.10.287.560 350 418 3.7E-12 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SMART SM01231 350 418 1.8E-11 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Pfam PF01627 Hpt domain 11 103 6.1E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Gene3D G3DSA:3.30.565.10 419 605 2.3E-55 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Gene3D G3DSA:2.30.30.40 606 735 9.4E-33 T 12-10-2018 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Gene3D G3DSA:2.40.50.180 629 695 9.4E-33 T 12-10-2018 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 351 418 1.1E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SUPERFAMILY SSF55874 420 604 3.67E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Pfam PF01584 CheW-like domain 611 741 7.6E-16 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 605 4.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SMART SM00073 9 106 2.0E-21 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c20440 61fa44cd82df25375d2fe4d88e5edfad 745 SMART SM00073 175 285 0.16 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Gene3D G3DSA:3.30.365.10 17 291 3.4E-97 T 12-10-2018 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Gene3D G3DSA:3.30.365.10 379 751 1.2E-115 T 12-10-2018 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Gene3D G3DSA:3.90.1170.50 33 130 3.4E-97 T 12-10-2018 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 SUPERFAMILY SSF54665 2 148 5.63E-35 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Gene3D G3DSA:3.30.365.10 459 611 1.2E-115 T 12-10-2018 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 695 3.3E-156 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 SMART SM01008 18 130 1.4E-35 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Gene3D G3DSA:3.30.365.10 131 368 3.4E-97 T 12-10-2018 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 SUPERFAMILY SSF56003 162 755 1.44E-175 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 CLSA_c18370 a82a0b0b5f1b5d48d6b7af53dd7355da 758 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 129 1.9E-23 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 SUPERFAMILY SSF51011 748 845 1.94E-6 T 12-10-2018 CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 SUPERFAMILY SSF49899 615 745 1.27E-7 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 SUPERFAMILY SSF51445 215 556 8.88E-65 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 SMART SM00813 482 838 3.1E-45 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 Gene3D G3DSA:2.60.120.560 605 763 1.6E-23 T 12-10-2018 CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 482 619 1.2E-34 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 676 838 8.0E-9 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 SUPERFAMILY SSF49785 74 231 1.42E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 Gene3D G3DSA:2.60.120.260 73 231 2.0E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c32560 d8f552b7c6b301e6eef3c4b912365795 847 Gene3D G3DSA:3.20.20.80 232 555 2.7E-87 T 12-10-2018 CLSA_c39700 b12fdff977ea2b536834507f8a8d3663 139 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 139 24.707 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 CLSA_c39700 b12fdff977ea2b536834507f8a8d3663 139 Pfam PF02623 FliW protein 19 138 9.3E-41 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 CLSA_c39700 b12fdff977ea2b536834507f8a8d3663 139 Gene3D G3DSA:2.30.290.10 2 139 8.4E-49 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily CLSA_c39700 b12fdff977ea2b536834507f8a8d3663 139 SUPERFAMILY SSF141457 1 138 6.93E-48 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 SMART SM00354 1 70 1.6E-26 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 SUPERFAMILY SSF53822 57 318 6.23E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 3.5E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 Gene3D G3DSA:3.40.50.2300 154 285 1.2E-62 T 12-10-2018 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 Pfam PF13377 Periplasmic binding protein-like domain 163 323 2.0E-22 T 12-10-2018 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 Gene3D G3DSA:1.10.260.40 3 58 2.7E-18 T 12-10-2018 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 Gene3D G3DSA:3.40.50.2300 61 305 1.2E-62 T 12-10-2018 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 SUPERFAMILY SSF47413 1 59 2.81E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c20700 3bdbfe41f4b4730547274e04a568483a 325 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 SUPERFAMILY SSF58104 328 664 9.81E-66 T 12-10-2018 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 Gene3D G3DSA:3.30.450.20 186 276 5.9E-40 T 12-10-2018 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 617 1.9E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 Pfam PF02743 Cache domain 51 270 3.8E-35 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 SMART SM00283 389 664 5.3E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 Gene3D G3DSA:3.30.450.20 84 185 5.9E-40 T 12-10-2018 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 348 592 0.003 T 12-10-2018 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 Gene3D G3DSA:1.10.8.500 307 360 1.6E-5 T 12-10-2018 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 SUPERFAMILY SSF103190 81 192 4.71E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 SMART SM00304 308 360 2.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 SMART SM00304 381 434 68.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03160 f6ec44925564de863f3fc0f2c7082693 668 Gene3D G3DSA:1.10.287.950 369 664 4.9E-59 T 12-10-2018 CLSA_c15590 9bc5e2eaf1a39d9769a22069fff72e92 142 SUPERFAMILY SSF55620 1 140 7.23E-32 T 12-10-2018 CLSA_c15590 9bc5e2eaf1a39d9769a22069fff72e92 142 Gene3D G3DSA:3.30.479.10 1 142 8.0E-29 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CLSA_c15590 9bc5e2eaf1a39d9769a22069fff72e92 142 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 141 2.6E-30 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CLSA_c15590 9bc5e2eaf1a39d9769a22069fff72e92 142 PIRSF PIRSF006113 79 142 1.8E-4 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CLSA_c15590 9bc5e2eaf1a39d9769a22069fff72e92 142 PIRSF PIRSF006113 1 83 2.6E-14 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 SUPERFAMILY SSF50193 1 122 6.41E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.647 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 Gene3D G3DSA:2.40.150.20 1 122 9.8E-54 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.3E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 SMART SM01374 1 122 2.6E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.6E-56 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLSA_c02120 b9d653019e8783b28f7aec94582d1e30 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 SUPERFAMILY SSF53850 93 291 1.04E-23 T 12-10-2018 CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 Pfam PF03466 LysR substrate binding domain 93 290 3.3E-20 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.2E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 Gene3D G3DSA:1.10.10.10 1 92 1.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 Gene3D G3DSA:3.40.190.290 93 291 3.4E-28 T 12-10-2018 CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 SUPERFAMILY SSF46785 1 84 1.06E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25340 47a2ab3e55dc97aadf5681b64436be85 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 Gene3D G3DSA:3.40.50.620 11 380 1.1E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 SUPERFAMILY SSF52374 10 385 4.64E-84 T 12-10-2018 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 SUPERFAMILY SSF47323 390 543 1.38E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 Gene3D G3DSA:1.10.730.10 381 534 7.4E-38 T 12-10-2018 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 Pfam PF08264 Anticodon-binding domain of tRNA 415 502 2.3E-8 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 Hamap MF_00098 Methionine--tRNA ligase [metG]. 8 543 35.731 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 Gene3D G3DSA:2.20.28.20 144 177 1.1E-135 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 SUPERFAMILY SSF57770 144 177 8.5E-6 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 Pfam PF09334 tRNA synthetases class I (M) 11 397 1.1E-133 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 PRINTS PR01041 Methionyl-tRNA synthetase signature 44 58 1.1E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 1.1E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 PRINTS PR01041 Methionyl-tRNA synthetase signature 12 25 1.1E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 265 1.1E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 1.1E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 PRINTS PR01041 Methionyl-tRNA synthetase signature 92 103 1.1E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00730 89b17e88519f2bf19fcddd38c5268052 549 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 12 533 8.2E-148 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 SMART SM00382 495 680 4.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 Pfam PF00664 ABC transporter transmembrane region 155 422 1.3E-51 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 2 702 1.1E-217 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 Gene3D G3DSA:1.20.1560.10 138 454 9.3E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 Pfam PF03412 Peptidase C39 family 2 127 1.1E-35 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 Pfam PF00005 ABC transporter 486 635 5.2E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 Gene3D G3DSA:3.40.50.300 460 714 1.4E-92 T 12-10-2018 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 Gene3D G3DSA:3.90.70.10 1 136 1.2E-45 T 12-10-2018 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 SUPERFAMILY SSF90123 136 452 1.83E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c02790 40b0cc8b0c6017207d10ebbfeeb3ed04 719 SUPERFAMILY SSF52540 461 705 4.99E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 SUPERFAMILY SSF50891 115 245 5.31E-49 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 SUPERFAMILY SSF160467 26 120 3.92E-17 T 12-10-2018 CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 SMART SM00796 24 229 9.6E-94 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 Gene3D G3DSA:2.40.100.10 114 252 6.0E-60 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 Gene3D G3DSA:3.30.1360.40 20 109 8.3E-23 T 12-10-2018 CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 25 229 3.5E-76 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CLSA_c30880 0e1ab5f727c3f922e21109054bb97af5 252 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 29 237 6.4E-72 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 28.39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 Gene3D G3DSA:2.40.50.100 28 93 1.6E-28 T 12-10-2018 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 90 2.1E-40 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 PRINTS PR00063 Ribosomal protein L27 signature 12 36 1.2E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 PRINTS PR00063 Ribosomal protein L27 signature 62 86 1.2E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 PRINTS PR00063 Ribosomal protein L27 signature 37 61 1.2E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 SUPERFAMILY SSF110324 10 91 2.06E-34 T 12-10-2018 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 8.0E-16 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 Pfam PF01016 Ribosomal L27 protein 10 87 2.3E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06420 53e4ee838418740a480201ffe1ec037e 99 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 Gene3D G3DSA:3.30.70.920 62 143 7.9E-29 T 12-10-2018 CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 Gene3D G3DSA:1.10.10.10 4 60 5.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 9.2E-15 T 12-10-2018 CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 SUPERFAMILY SSF54909 70 152 1.34E-18 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 SMART SM00344 9 116 7.4E-39 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 SUPERFAMILY SSF46785 8 69 2.2E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 75 147 3.1E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 1.2E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 1.2E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c12740 b48405c4d112bcb3d837ade8c9e6c61d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 1.2E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c39740 113a2c7e12006bb38d2abad1a1097c7c 91 SUPERFAMILY SSF101498 1 86 2.75E-14 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily CLSA_c39740 113a2c7e12006bb38d2abad1a1097c7c 91 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 84 2.4E-11 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CLSA_c39740 113a2c7e12006bb38d2abad1a1097c7c 91 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 85 1.6E-11 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CLSA_c45070 60b6acaf51fcf133fd5596e15656ded8 724 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 512 670 5.0E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c45070 60b6acaf51fcf133fd5596e15656ded8 724 SMART SM00283 443 722 1.8E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c45070 60b6acaf51fcf133fd5596e15656ded8 724 Gene3D G3DSA:3.30.450.20 59 159 1.2E-6 T 12-10-2018 CLSA_c45070 60b6acaf51fcf133fd5596e15656ded8 724 SUPERFAMILY SSF58104 382 722 9.29E-61 T 12-10-2018 CLSA_c45070 60b6acaf51fcf133fd5596e15656ded8 724 Gene3D G3DSA:1.10.287.950 409 722 2.6E-56 T 12-10-2018 CLSA_c13590 2aa9d87ae5a973a83a7d89fe7929ba93 457 Pfam PF00860 Permease family 23 407 1.5E-47 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CLSA_c13590 2aa9d87ae5a973a83a7d89fe7929ba93 457 PIRSF PIRSF005353 1 457 1.2E-165 T 12-10-2018 IPR026033 Purine permease PbuG-like CLSA_c23150 b5ff0c289a68ace2723f69336b3a5025 357 Gene3D G3DSA:1.10.150.130 64 170 3.5E-7 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c23150 b5ff0c289a68ace2723f69336b3a5025 357 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 70 121 9.1E-6 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLSA_c23150 b5ff0c289a68ace2723f69336b3a5025 357 Pfam PF00589 Phage integrase family 174 343 2.1E-20 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c23150 b5ff0c289a68ace2723f69336b3a5025 357 Pfam PF14657 Arm DNA-binding domain 14 53 6.1E-9 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain CLSA_c23150 b5ff0c289a68ace2723f69336b3a5025 357 SUPERFAMILY SSF56349 70 349 1.15E-48 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c23150 b5ff0c289a68ace2723f69336b3a5025 357 Gene3D G3DSA:1.10.443.10 171 356 6.7E-33 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 SUPERFAMILY SSF55874 287 451 8.77E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 451 1.2E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 SMART SM00387 343 452 1.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 SUPERFAMILY SSF47384 218 298 6.28E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 297 2.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 SMART SM00304 171 223 0.004 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 Gene3D G3DSA:3.30.565.10 298 453 2.3E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 Gene3D G3DSA:1.10.287.130 170 293 9.7E-20 T 12-10-2018 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 SUPERFAMILY SSF158472 174 219 1.57E-5 T 12-10-2018 CLSA_c31590 4bcac8449faa7410510f0d1ca1bbe305 453 SMART SM00388 231 297 1.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c07000 61f6690cc5682958622b124cc48c8613 246 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 9.3E-29 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c07000 61f6690cc5682958622b124cc48c8613 246 SUPERFAMILY SSF53223 4 108 2.13E-32 T 12-10-2018 CLSA_c07000 61f6690cc5682958622b124cc48c8613 246 SUPERFAMILY SSF51735 109 245 2.89E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c07000 61f6690cc5682958622b124cc48c8613 246 Gene3D G3DSA:3.40.50.10860 13 109 3.3E-81 T 12-10-2018 CLSA_c07000 61f6690cc5682958622b124cc48c8613 246 Gene3D G3DSA:3.40.50.720 110 246 3.3E-81 T 12-10-2018 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 SUPERFAMILY SSF52922 258 412 3.14E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 748 759 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 SMART SM00890 620 681 1.8E-25 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 268 373 3.6E-14 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Gene3D G3DSA:3.40.50.920 258 412 1.3E-56 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 SUPERFAMILY SSF54862 670 834 6.7E-21 T 12-10-2018 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Gene3D G3DSA:3.30.70.20 671 787 2.7E-38 T 12-10-2018 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Pfam PF10371 Domain of unknown function 624 680 1.7E-20 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 20 246 1.8E-80 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Gene3D G3DSA:3.40.50.970 788 1169 3.9E-171 T 12-10-2018 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1068 2.4E-9 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 PIRSF PIRSF000159 1 1169 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Gene3D G3DSA:3.40.50.970 1 257 7.6E-110 T 12-10-2018 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 4 1168 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 SUPERFAMILY SSF52518 789 1168 2.19E-132 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 SUPERFAMILY SSF53323 415 669 6.41E-86 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 424 607 3.7E-32 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 SUPERFAMILY SSF52518 3 257 4.12E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Gene3D G3DSA:3.40.920.10 414 623 2.1E-89 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLSA_c22210 19ae7f2e08e0d9a0a30c78e5a0397398 1169 Pfam PF12838 4Fe-4S dicluster domain 690 760 2.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Gene3D G3DSA:3.30.470.20 518 620 3.2E-14 T 12-10-2018 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Hamap MF_00782 Glutathione biosynthesis bifunctional protein GshAB [gshAB]. 1 782 318.163 T 12-10-2018 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Gene3D G3DSA:3.30.470.20 677 780 2.5E-12 T 12-10-2018 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 SUPERFAMILY SSF55931 5 491 5.69E-139 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Gene3D G3DSA:3.30.1490.20 536 605 3.2E-14 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Pfam PF04262 Glutamate-cysteine ligase 5 275 1.3E-79 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 SUPERFAMILY SSF56059 521 778 1.14E-28 T 12-10-2018 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 TIGRFAM TIGR01435 glu_cys_lig_rel: glutamate--cysteine ligase/glutathione synthase 14 775 1.8E-198 T 12-10-2018 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Gene3D G3DSA:3.30.590.20 3 462 1.1E-132 T 12-10-2018 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 521 615 1.1E-5 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c14750 0f2f3ee6cad63868a633fd4bd7725f83 782 Pfam PF08443 RimK-like ATP-grasp domain 695 758 1.6E-4 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 Hamap MF_00008 Thymidylate synthase [thyA]. 5 263 38.492 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 104 263 5.2E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 ProSitePatterns PS00091 Thymidylate synthase active site. 123 151 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 SUPERFAMILY SSF55831 2 263 1.44E-93 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 PRINTS PR00108 Thymidylate synthase family signature 138 153 7.2E-30 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 PRINTS PR00108 Thymidylate synthase family signature 194 211 7.2E-30 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 PRINTS PR00108 Thymidylate synthase family signature 156 182 7.2E-30 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 PRINTS PR00108 Thymidylate synthase family signature 112 131 7.2E-30 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 PRINTS PR00108 Thymidylate synthase family signature 46 67 7.2E-30 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 Gene3D G3DSA:3.30.572.10 2 263 4.1E-99 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c44120 2a461f6de8295dca30fd824377e21b99 263 Pfam PF00303 Thymidylate synthase 7 263 8.5E-95 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 SUPERFAMILY SSF53335 66 241 3.8E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 Gene3D G3DSA:3.40.50.150 65 255 6.5E-60 T 12-10-2018 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 SUPERFAMILY SSF47757 2 65 1.28E-13 T 12-10-2018 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 SMART SM00138 2 253 9.6E-78 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 PRINTS PR00996 Glutamate methyltransferase family signature 59 71 9.3E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 PRINTS PR00996 Glutamate methyltransferase family signature 194 208 9.3E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 PRINTS PR00996 Glutamate methyltransferase family signature 96 116 9.3E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 PRINTS PR00996 Glutamate methyltransferase family signature 128 144 9.3E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 PRINTS PR00996 Glutamate methyltransferase family signature 22 35 9.3E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 PRINTS PR00996 Glutamate methyltransferase family signature 213 236 9.3E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 Pfam PF01739 CheR methyltransferase, SAM binding domain 66 240 2.6E-54 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 Gene3D G3DSA:1.10.155.10 1 64 3.1E-8 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLSA_c39810 a33d3b19a4fb1d63de07e3d03cd0b601 255 Pfam PF03705 CheR methyltransferase, all-alpha domain 2 52 3.6E-14 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLSA_c34410 87b454618cc13e26c32a774c33a8b1d2 268 Gene3D G3DSA:1.10.10.60 227 268 1.4E-5 T 12-10-2018 CLSA_c34410 87b454618cc13e26c32a774c33a8b1d2 268 Pfam PF02796 Helix-turn-helix domain of resolvase 238 267 5.5E-7 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CLSA_c34410 87b454618cc13e26c32a774c33a8b1d2 268 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 203 2.8E-15 T 12-10-2018 CLSA_c34410 87b454618cc13e26c32a774c33a8b1d2 268 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 266 3.7E-36 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA CLSA_c44270 61e2eb326c29b2b9674398b949e059fe 312 Pfam PF00294 pfkB family carbohydrate kinase 3 307 1.4E-74 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB CLSA_c44270 61e2eb326c29b2b9674398b949e059fe 312 Gene3D G3DSA:3.40.1190.20 1 312 9.1E-78 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c44270 61e2eb326c29b2b9674398b949e059fe 312 SUPERFAMILY SSF53613 1 311 2.81E-71 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c44270 61e2eb326c29b2b9674398b949e059fe 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Gene3D G3DSA:2.30.30.40 464 590 1.6E-29 T 12-10-2018 CLSA_c20570 76e46db704d207c70c552418e586891d 601 SUPERFAMILY SSF50341 460 599 1.06E-27 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Pfam PF01584 CheW-like domain 463 599 7.9E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Pfam PF01584 CheW-like domain 292 428 2.0E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Pfam PF01584 CheW-like domain 127 261 1.3E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Gene3D G3DSA:2.40.50.180 145 255 6.3E-29 T 12-10-2018 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Gene3D G3DSA:2.40.50.180 311 422 1.0E-24 T 12-10-2018 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Gene3D G3DSA:2.40.50.180 481 547 1.6E-29 T 12-10-2018 CLSA_c20570 76e46db704d207c70c552418e586891d 601 SUPERFAMILY SSF50341 291 432 3.14E-25 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 SMART SM00260 288 427 3.0E-18 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 SMART SM00260 122 260 4.8E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 SMART SM00260 458 598 1.7E-17 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Gene3D G3DSA:2.30.30.40 128 254 6.3E-29 T 12-10-2018 CLSA_c20570 76e46db704d207c70c552418e586891d 601 SUPERFAMILY SSF50341 122 261 3.14E-29 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20570 76e46db704d207c70c552418e586891d 601 Gene3D G3DSA:2.30.30.40 294 421 1.0E-24 T 12-10-2018 CLSA_c17600 83089839544394eb59c698beda929db9 271 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 7 259 1.7E-83 T 12-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 CLSA_c17600 83089839544394eb59c698beda929db9 271 Pfam PF02540 NAD synthase 16 78 5.9E-7 T 12-10-2018 IPR022310 NAD/GMP synthase CLSA_c17600 83089839544394eb59c698beda929db9 271 PIRSF PIRSF006661 1 268 2.4E-106 T 12-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 CLSA_c17600 83089839544394eb59c698beda929db9 271 SUPERFAMILY SSF52402 19 219 9.04E-38 T 12-10-2018 CLSA_c17600 83089839544394eb59c698beda929db9 271 Gene3D G3DSA:3.40.50.620 2 166 4.0E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Gene3D G3DSA:1.20.1480.50 132 224 5.6E-11 T 12-10-2018 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 443 552 1.9E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SMART SM00091 225 290 1.3E-4 T 12-10-2018 IPR000014 PAS domain CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SMART SM00388 334 399 1.2E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SUPERFAMILY SSF55785 225 281 3.66E-6 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Pfam PF13188 PAS domain 226 270 3.9E-5 T 12-10-2018 IPR000014 PAS domain CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SUPERFAMILY SSF158472 166 214 1.57E-9 T 12-10-2018 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Pfam PF00672 HAMP domain 166 214 2.7E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Pfam PF00512 His Kinase A (phospho-acceptor) domain 334 398 1.1E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SMART SM00304 166 218 1.9E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Gene3D G3DSA:3.30.565.10 405 554 1.3E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Pfam PF16736 Single Cache-like 60 120 3.9E-7 T 12-10-2018 IPR031967 PhoR, single Cache-like domain CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SUPERFAMILY SSF55874 388 553 4.85E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SMART SM00387 443 555 4.5E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 SUPERFAMILY SSF47384 322 399 8.24E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 510 2.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 533 2.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 496 2.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 552 2.9E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Gene3D G3DSA:3.30.450.20 227 327 1.2E-13 T 12-10-2018 CLSA_c13480 80e7b49ec746fb57f7864507224f3cff 556 Gene3D G3DSA:1.10.287.130 328 402 6.4E-25 T 12-10-2018 CLSA_c45170 5a694d2aad3cdcf6cc0e7de4a75788d0 327 Pfam PF01695 IstB-like ATP binding protein 179 288 1.1E-15 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CLSA_c45170 5a694d2aad3cdcf6cc0e7de4a75788d0 327 SUPERFAMILY SSF52540 157 310 5.0E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c45170 5a694d2aad3cdcf6cc0e7de4a75788d0 327 Gene3D G3DSA:3.40.50.300 136 326 3.9E-35 T 12-10-2018 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 SUPERFAMILY SSF50715 15 178 6.28E-39 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 178 2.1E-36 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 181 20.062 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 Gene3D G3DSA:2.40.240.10 3 93 2.2E-20 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 179 1.5E-15 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 93 4.0E-15 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 Pfam PF01386 Ribosomal L25p family 4 90 1.6E-18 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12270 9ec4ba226553aee3defb86c2cbb9182d 192 Gene3D G3DSA:2.170.120.20 95 189 2.0E-14 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 Pfam PF03466 LysR substrate binding domain 93 298 8.7E-26 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 SUPERFAMILY SSF53850 93 299 5.89E-27 T 12-10-2018 CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 SUPERFAMILY SSF46785 2 82 1.9E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 Gene3D G3DSA:3.40.190.290 93 303 3.7E-24 T 12-10-2018 CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 Gene3D G3DSA:1.10.10.10 2 83 7.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c26060 8532dbebbe5dbf35ed2627d679118b88 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c28590 ad19c57efe7d0f783727101b16f78769 394 Gene3D G3DSA:3.40.50.2000 46 380 2.4E-59 T 12-10-2018 CLSA_c28590 ad19c57efe7d0f783727101b16f78769 394 SUPERFAMILY SSF53756 4 385 4.4E-71 T 12-10-2018 CLSA_c28590 ad19c57efe7d0f783727101b16f78769 394 Gene3D G3DSA:3.40.50.2000 178 367 2.4E-59 T 12-10-2018 CLSA_c28590 ad19c57efe7d0f783727101b16f78769 394 Pfam PF00534 Glycosyl transferases group 1 192 362 1.3E-31 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c28590 ad19c57efe7d0f783727101b16f78769 394 Pfam PF13439 Glycosyltransferase Family 4 15 179 1.2E-14 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c37380 f8db31c1965e1c15bf4ea0def7cc6543 372 SUPERFAMILY SSF55797 249 370 2.35E-25 T 12-10-2018 IPR035940 CAP superfamily CLSA_c37380 f8db31c1965e1c15bf4ea0def7cc6543 372 Pfam PF01473 Putative cell wall binding repeat 70 88 7.7E-9 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c37380 f8db31c1965e1c15bf4ea0def7cc6543 372 Gene3D G3DSA:3.40.33.10 242 372 6.7E-42 T 12-10-2018 IPR035940 CAP superfamily CLSA_c37380 f8db31c1965e1c15bf4ea0def7cc6543 372 Pfam PF00188 Cysteine-rich secretory protein family 255 364 3.5E-20 T 12-10-2018 IPR014044 CAP domain CLSA_c37380 f8db31c1965e1c15bf4ea0def7cc6543 372 SUPERFAMILY SSF69360 35 131 3.14E-24 T 12-10-2018 CLSA_c37380 f8db31c1965e1c15bf4ea0def7cc6543 372 Gene3D G3DSA:2.10.270.10 6 183 5.2E-21 T 12-10-2018 CLSA_c21670 7c8b9f0f23330c5a65c1ec25baf23d0c 259 Pfam PF12705 PD-(D/E)XK nuclease superfamily 4 224 1.1E-9 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CLSA_c21670 7c8b9f0f23330c5a65c1ec25baf23d0c 259 Gene3D G3DSA:3.90.320.10 7 125 2.5E-5 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLSA_c26630 1298d7a8970d9c6ddd08f1de1e82c2cf 202 TIGRFAM TIGR03934 TQXA_dom: TQXA domain 89 129 7.1E-11 T 12-10-2018 IPR023849 Uncharacterised domain CHP03934, TQXA CLSA_c40260 e6d5b3c437fc7131b28dfeae59518774 318 SUPERFAMILY SSF55658 4 56 9.94E-6 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLSA_c40260 e6d5b3c437fc7131b28dfeae59518774 318 Gene3D G3DSA:3.30.420.10 71 218 3.4E-25 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c40260 e6d5b3c437fc7131b28dfeae59518774 318 Pfam PF01693 Caulimovirus viroplasmin 4 55 1.9E-10 T 12-10-2018 IPR011320 Ribonuclease H1, N-terminal CLSA_c40260 e6d5b3c437fc7131b28dfeae59518774 318 Pfam PF13456 Reverse transcriptase-like 79 181 5.2E-5 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CLSA_c40260 e6d5b3c437fc7131b28dfeae59518774 318 SUPERFAMILY SSF53098 74 209 1.18E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c40260 e6d5b3c437fc7131b28dfeae59518774 318 Gene3D G3DSA:3.40.970.10 4 56 4.8E-10 T 12-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 306 1.0E-106 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 Gene3D G3DSA:3.50.50.60 11 305 8.7E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.3E-39 T 12-10-2018 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-39 T 12-10-2018 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.3E-39 T 12-10-2018 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.3E-39 T 12-10-2018 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.3E-39 T 12-10-2018 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 SUPERFAMILY SSF51905 3 304 8.39E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 Gene3D G3DSA:3.50.50.60 124 246 8.7E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 295 1.5E-46 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c01720 8e36924f4fa5360ee2133ad6020c6bb2 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 3.4E-65 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04920 d48a57938105571560aa75ab6784eef5 329 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 3 142 7.0E-12 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 CLSA_c04920 d48a57938105571560aa75ab6784eef5 329 Gene3D G3DSA:3.40.50.620 2 169 1.8E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c04920 d48a57938105571560aa75ab6784eef5 329 SUPERFAMILY SSF52402 2 224 1.3E-30 T 12-10-2018 CLSA_c04920 d48a57938105571560aa75ab6784eef5 329 Pfam PF05670 Domain of unknown function (DUF814) 225 305 1.7E-8 T 12-10-2018 IPR008532 Domain of unknown function DUF814 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 SUPERFAMILY SSF50447 259 386 3.53E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Gene3D G3DSA:3.40.50.300 19 273 2.4E-107 T 12-10-2018 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 527 48.713 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Pfam PF00009 Elongation factor Tu GTP binding domain 10 273 2.1E-50 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 146 1.2E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Pfam PF03144 Elongation factor Tu domain 2 312 378 2.0E-8 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 SUPERFAMILY SSF54980 392 465 7.19E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 SUPERFAMILY SSF52540 7 273 3.1E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.2E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.2E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.2E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.2E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.2E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Gene3D G3DSA:3.30.70.3280 389 527 1.1E-43 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 518 3.2E-209 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 514 5.3E-48 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal CLSA_c41740 4e8afdfae1515b2b129143dedd9a0f6e 531 Gene3D G3DSA:3.40.50.300 12 378 2.4E-107 T 12-10-2018 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 ProSitePatterns PS00760 Signal peptidases I lysine active site. 95 107 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 Pfam PF00717 Peptidase S24-like 48 108 6.8E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 ProSitePatterns PS00761 Signal peptidases I signature 3. 141 154 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 29 178 6.1E-42 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 SUPERFAMILY SSF51306 42 184 1.87E-43 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 5.9E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 105 5.9E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 42 58 5.9E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42710 83f5760a87cb81ae4565c81cb3c5b71f 185 Gene3D G3DSA:2.10.109.10 50 176 3.0E-33 T 12-10-2018 CLSA_c39190 8eab7f8dadf81c9e99f228d4f1f0db17 290 Gene3D G3DSA:3.40.50.300 28 268 3.9E-57 T 12-10-2018 CLSA_c39190 8eab7f8dadf81c9e99f228d4f1f0db17 290 Pfam PF13614 AAA domain 29 194 1.4E-21 T 12-10-2018 IPR025669 AAA domain CLSA_c39190 8eab7f8dadf81c9e99f228d4f1f0db17 290 SUPERFAMILY SSF52540 28 270 4.48E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c39190 8eab7f8dadf81c9e99f228d4f1f0db17 290 PIRSF PIRSF003092 1 290 6.5E-91 T 12-10-2018 IPR025501 ATP binding protein MinD CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Gene3D G3DSA:2.40.50.180 574 635 7.8E-37 T 12-10-2018 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Gene3D G3DSA:1.10.287.560 307 367 4.9E-22 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SMART SM00073 3 100 7.4E-33 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Pfam PF07194 P2 response regulator binding domain 177 253 7.7E-23 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Gene3D G3DSA:1.20.120.160 1 142 2.6E-42 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SUPERFAMILY SSF47226 3 122 4.32E-34 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Pfam PF01627 Hpt domain 6 105 1.3E-21 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Gene3D G3DSA:3.30.70.1110 172 256 4.7E-26 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Gene3D G3DSA:2.30.30.40 551 676 7.8E-37 T 12-10-2018 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Pfam PF01584 CheW-like domain 555 680 1.2E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Gene3D G3DSA:3.30.565.10 368 550 6.1E-54 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 308 367 2.8E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SUPERFAMILY SSF55052 172 253 8.11E-21 T 12-10-2018 IPR035891 CheY-binding domain of CheA CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SMART SM00387 412 551 1.8E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SMART SM00260 543 680 3.5E-36 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SMART SM01231 307 367 8.3E-21 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SUPERFAMILY SSF50341 550 680 2.09E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 8.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 8.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 8.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 550 6.7E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SUPERFAMILY SSF47384 308 368 3.77E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c39800 45f4a723517db428bf6c5cea05b54c18 680 SUPERFAMILY SSF55874 369 549 1.7E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18890 514eabf7fe7680726d60ef035a1482cc 456 PIRSF PIRSF006603 1 455 2.0E-68 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c18890 514eabf7fe7680726d60ef035a1482cc 456 Pfam PF01554 MatE 22 182 1.9E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c18890 514eabf7fe7680726d60ef035a1482cc 456 Pfam PF01554 MatE 246 408 8.2E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c18890 514eabf7fe7680726d60ef035a1482cc 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 5.7E-53 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c17320 06ee16e5dab9e4e569c5f78069e98449 304 Gene3D G3DSA:3.50.30.60 169 303 2.5E-42 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLSA_c17320 06ee16e5dab9e4e569c5f78069e98449 304 PIRSF PIRSF028757 1 304 8.3E-90 T 12-10-2018 IPR003507 Peptidase family S66 CLSA_c17320 06ee16e5dab9e4e569c5f78069e98449 304 SUPERFAMILY SSF52317 1 158 8.7E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c17320 06ee16e5dab9e4e569c5f78069e98449 304 Pfam PF02016 LD-carboxypeptidase 13 293 3.1E-82 T 12-10-2018 IPR003507 Peptidase family S66 CLSA_c17320 06ee16e5dab9e4e569c5f78069e98449 304 Gene3D G3DSA:3.40.50.10740 1 157 6.0E-54 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CLSA_c17320 06ee16e5dab9e4e569c5f78069e98449 304 SUPERFAMILY SSF141986 140 300 6.8E-44 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 Gene3D G3DSA:3.40.190.10 163 193 1.7E-12 T 12-10-2018 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 SUPERFAMILY SSF53850 90 196 2.71E-9 T 12-10-2018 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 SUPERFAMILY SSF46785 1 82 2.99E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 Gene3D G3DSA:3.40.190.10 91 162 1.7E-12 T 12-10-2018 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 Pfam PF03466 LysR substrate binding domain 90 196 9.0E-9 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c17810 5248eeb81d669f77516e2e3695ade2cd 202 Gene3D G3DSA:1.10.10.10 1 89 2.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 PRINTS PR00419 Adrenodoxin reductase family signature 87 100 9.1E-6 T 12-10-2018 CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 PRINTS PR00419 Adrenodoxin reductase family signature 64 86 9.1E-6 T 12-10-2018 CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 SUPERFAMILY SSF51905 61 568 3.37E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 Gene3D G3DSA:1.20.1440.240 175 275 7.0E-71 T 12-10-2018 CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 Gene3D G3DSA:3.50.50.60 64 562 7.0E-71 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 Pfam PF01593 Flavin containing amine oxidoreductase 73 565 6.6E-48 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 Gene3D G3DSA:3.90.660.10 102 509 7.0E-71 T 12-10-2018 CLSA_c41800 5149ed8b8f6be81e9f33ce7821ed284c 579 SUPERFAMILY SSF54373 381 509 1.96E-15 T 12-10-2018 CLSA_c20690 af1e49b4dc61984f0842de93bd247324 60 SUPERFAMILY SSF69360 1 36 1.7E-11 T 12-10-2018 CLSA_c20690 af1e49b4dc61984f0842de93bd247324 60 Pfam PF01473 Putative cell wall binding repeat 3 21 1.4E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c20690 af1e49b4dc61984f0842de93bd247324 60 Gene3D G3DSA:2.10.270.10 1 57 5.0E-11 T 12-10-2018 CLSA_c24230 ee11255598f0a707ed5ef679729c3238 440 Gene3D G3DSA:3.30.420.10 278 431 4.5E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c24230 ee11255598f0a707ed5ef679729c3238 440 SUPERFAMILY SSF53098 271 432 6.98E-26 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c24230 ee11255598f0a707ed5ef679729c3238 440 Pfam PF13276 HTH-like domain 193 248 2.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c24230 ee11255598f0a707ed5ef679729c3238 440 Pfam PF00665 Integrase core domain 279 393 1.1E-17 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c10780 ee11255598f0a707ed5ef679729c3238 440 Gene3D G3DSA:3.30.420.10 278 431 4.5E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c10780 ee11255598f0a707ed5ef679729c3238 440 SUPERFAMILY SSF53098 271 432 6.98E-26 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c10780 ee11255598f0a707ed5ef679729c3238 440 Pfam PF13276 HTH-like domain 193 248 2.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c10780 ee11255598f0a707ed5ef679729c3238 440 Pfam PF00665 Integrase core domain 279 393 1.1E-17 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c28010 ee11255598f0a707ed5ef679729c3238 440 Gene3D G3DSA:3.30.420.10 278 431 4.5E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c28010 ee11255598f0a707ed5ef679729c3238 440 SUPERFAMILY SSF53098 271 432 6.98E-26 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c28010 ee11255598f0a707ed5ef679729c3238 440 Pfam PF13276 HTH-like domain 193 248 2.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c28010 ee11255598f0a707ed5ef679729c3238 440 Pfam PF00665 Integrase core domain 279 393 1.1E-17 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c24020 735f4464ba4aae5adccf6fa43bc02808 175 SUPERFAMILY SSF55144 1 174 1.18E-15 T 12-10-2018 IPR009097 Cyclic phosphodiesterase CLSA_c24020 735f4464ba4aae5adccf6fa43bc02808 175 Gene3D G3DSA:3.90.1140.10 1 175 1.5E-23 T 12-10-2018 CLSA_c24020 735f4464ba4aae5adccf6fa43bc02808 175 Pfam PF13563 2'-5' RNA ligase superfamily 18 164 1.0E-17 T 12-10-2018 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 SMART SM00388 160 231 5.6E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 388 2.2E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 386 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 328 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 367 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 342 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 230 9.8E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 SMART SM00387 277 389 4.6E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 SUPERFAMILY SSF47384 145 232 1.02E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 SUPERFAMILY SSF55874 220 391 1.44E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 SUPERFAMILY SSF52172 7 149 1.57E-30 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 Gene3D G3DSA:1.10.287.130 129 229 4.9E-22 T 12-10-2018 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 Gene3D G3DSA:3.30.565.10 236 401 2.4E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 Gene3D G3DSA:3.40.50.2300 5 128 2.5E-27 T 12-10-2018 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 SMART SM00448 7 123 9.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21890 68a7a09c4d9c0e23cf49f1a1ae93a3db 420 Pfam PF00072 Response regulator receiver domain 9 123 4.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Gene3D G3DSA:3.30.420.40 97 241 1.9E-67 T 12-10-2018 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 SUPERFAMILY SSF53067 320 575 4.43E-51 T 12-10-2018 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 SUPERFAMILY SSF53067 4 255 8.65E-55 T 12-10-2018 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Gene3D G3DSA:3.30.420.40 415 558 7.1E-82 T 12-10-2018 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 321 575 4.7E-35 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 255 1.4E-18 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Gene3D G3DSA:3.30.420.40 321 575 7.1E-82 T 12-10-2018 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Gene3D G3DSA:3.30.420.40 6 255 1.9E-67 T 12-10-2018 CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 905 1223 8.7E-55 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 321 574 8.6E-39 T 12-10-2018 IPR008275 CoA enzyme activase CLSA_c27840 95a1ca15939d056fdc18a31f29bb80e6 1432 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 672 890 5.6E-82 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLSA_c07840 a377b1fb644b1d7c33857130c679f635 367 SUPERFAMILY SSF141571 216 362 2.49E-30 T 12-10-2018 CLSA_c07840 a377b1fb644b1d7c33857130c679f635 367 Pfam PF13599 Pentapeptide repeats (9 copies) 267 342 1.8E-13 T 12-10-2018 IPR001646 Pentapeptide repeat CLSA_c07840 a377b1fb644b1d7c33857130c679f635 367 Gene3D G3DSA:2.160.20.100 186 365 8.8E-32 T 12-10-2018 CLSA_c40120 da0f256e784d235bb0cfa2c24f77f0bc 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 6 144 2.1E-52 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CLSA_c40120 da0f256e784d235bb0cfa2c24f77f0bc 146 Pfam PF00692 dUTPase 14 144 1.2E-32 T 12-10-2018 IPR029054 dUTPase-like CLSA_c40120 da0f256e784d235bb0cfa2c24f77f0bc 146 SUPERFAMILY SSF51283 4 145 1.31E-49 T 12-10-2018 IPR036157 dUTPase-like superfamily CLSA_c40120 da0f256e784d235bb0cfa2c24f77f0bc 146 Gene3D G3DSA:2.70.40.10 1 144 7.6E-54 T 12-10-2018 IPR036157 dUTPase-like superfamily CLSA_c40120 da0f256e784d235bb0cfa2c24f77f0bc 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 145 29.753 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 SUPERFAMILY SSF56112 7 275 3.64E-79 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 Pfam PF03793 PASTA domain 394 455 3.5E-12 T 12-10-2018 IPR005543 PASTA domain CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 Pfam PF00069 Protein kinase domain 10 261 9.8E-51 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 Gene3D G3DSA:3.30.200.20 1 89 7.6E-29 T 12-10-2018 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 SMART SM00220 10 271 1.5E-61 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 PIRSF PIRSF000654 6 285 4.1E-37 T 12-10-2018 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 PIRSF PIRSF000654 434 512 58.0 T 12-10-2018 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 Gene3D G3DSA:1.10.510.10 91 277 9.1E-52 T 12-10-2018 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 Gene3D G3DSA:3.30.10.20 389 458 7.9E-16 T 12-10-2018 CLSA_c25460 01a11bb9aa38db964217b9f24f3e1f20 513 SMART SM00740 389 456 1.7E-9 T 12-10-2018 IPR005543 PASTA domain CLSA_c12820 b4d2a2e5c3ec6aab778afde19ca3badf 251 SUPERFAMILY SSF161098 9 243 6.93E-17 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c12820 b4d2a2e5c3ec6aab778afde19ca3badf 251 Gene3D G3DSA:1.10.3720.10 55 248 2.7E-14 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c12820 b4d2a2e5c3ec6aab778afde19ca3badf 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 246 2.3E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 Gene3D G3DSA:3.30.300.30 121 218 2.5E-8 T 12-10-2018 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 Pfam PF01514 Secretory protein of YscJ/FliF family 30 217 1.4E-57 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF CLSA_c39360 50e85e964872d501df9703704d21ee20 524 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 4 522 4.8E-79 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 PRINTS PR01009 Flagellar M-ring protein signature 193 211 2.9E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 PRINTS PR01009 Flagellar M-ring protein signature 150 164 2.9E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 PRINTS PR01009 Flagellar M-ring protein signature 118 136 2.9E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 PRINTS PR01009 Flagellar M-ring protein signature 268 286 2.9E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 PRINTS PR01009 Flagellar M-ring protein signature 342 366 2.9E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c39360 50e85e964872d501df9703704d21ee20 524 Pfam PF08345 Flagellar M-ring protein C-terminal 255 405 1.2E-34 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal CLSA_c39360 50e85e964872d501df9703704d21ee20 524 PIRSF PIRSF004862 1 524 9.7E-114 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 SMART SM00331 285 490 9.6E-15 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 SMART SM00091 29 94 0.31 T 12-10-2018 IPR000014 PAS domain CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 SMART SM00091 151 216 3.6E-6 T 12-10-2018 IPR000014 PAS domain CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 318 489 1.0E-20 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 Gene3D G3DSA:3.60.40.10 260 490 2.8E-36 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 SUPERFAMILY SSF55785 15 130 5.23E-13 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 Pfam PF00989 PAS fold 151 260 2.1E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 Gene3D G3DSA:3.30.450.20 139 259 3.4E-18 T 12-10-2018 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 Gene3D G3DSA:3.30.450.20 10 138 2.4E-17 T 12-10-2018 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 Pfam PF08448 PAS fold 35 140 3.1E-9 T 12-10-2018 IPR013656 PAS fold-4 CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 265 5.0E-14 T 12-10-2018 IPR000014 PAS domain CLSA_c20820 153d81fd27339f75643527de48c4bce7 491 SUPERFAMILY SSF55785 136 261 4.36E-19 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 Gene3D G3DSA:1.10.10.10 124 223 3.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 Gene3D G3DSA:3.40.50.2300 2 123 5.3E-30 T 12-10-2018 CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 SMART SM00862 147 222 3.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 SUPERFAMILY SSF46894 126 222 1.3E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 Pfam PF00072 Response regulator receiver domain 4 112 6.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 SUPERFAMILY SSF52172 2 124 1.1E-32 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 6.5E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c09590 c807086ea8fc74279e6e7a6b2a3c9e92 223 SMART SM00448 2 112 2.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 SUPERFAMILY SSF46955 7 53 3.48E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 Pfam PF00239 Resolvase, N terminal domain 63 147 1.2E-17 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 SMART SM00422 7 81 0.0035 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 SUPERFAMILY SSF53041 62 160 5.62E-20 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 Pfam PF13411 MerR HTH family regulatory protein 7 53 9.6E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 SMART SM00857 63 161 3.8E-12 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 Gene3D G3DSA:3.40.50.1390 62 161 4.3E-27 T 12-10-2018 CLSA_c25090 bb45fc04999ecc65e05fa93d83995e51 161 Gene3D G3DSA:1.10.1660.10 2 61 5.8E-11 T 12-10-2018 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 34 450 1.2E-141 T 12-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 SUPERFAMILY SSF102114 155 442 9.03E-57 T 12-10-2018 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 Pfam PF04055 Radical SAM superfamily 177 347 4.4E-26 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 Gene3D G3DSA:3.40.50.12160 30 163 1.2E-21 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 Pfam PF00919 Uncharacterized protein family UPF0004 32 126 5.3E-25 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 175 195 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 Gene3D G3DSA:3.80.30.20 168 403 3.3E-86 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 SMART SM00729 171 389 7.0E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 32 460 2.8E-138 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CLSA_c10910 4919718c9b72f4f6c95ce28ae2c92230 463 Pfam PF01938 TRAM domain 400 463 3.8E-9 T 12-10-2018 IPR002792 TRAM domain CLSA_c38670 c9b338ca77ddd792c21a69239d9c67e3 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 1.7E-42 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 CLSA_c38670 c9b338ca77ddd792c21a69239d9c67e3 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLSA_c38670 c9b338ca77ddd792c21a69239d9c67e3 132 Gene3D G3DSA:3.40.140.10 1 132 2.9E-48 T 12-10-2018 CLSA_c38670 c9b338ca77ddd792c21a69239d9c67e3 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 1.1E-14 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CLSA_c38670 c9b338ca77ddd792c21a69239d9c67e3 132 SUPERFAMILY SSF53927 1 129 7.86E-44 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CLSA_c35000 c095a4f0cbfac43992c901706f7e61eb 170 Gene3D G3DSA:3.40.630.30 1 169 2.4E-53 T 12-10-2018 CLSA_c35000 c095a4f0cbfac43992c901706f7e61eb 170 SUPERFAMILY SSF55729 1 163 6.38E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c35000 c095a4f0cbfac43992c901706f7e61eb 170 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 6.0E-24 T 12-10-2018 CLSA_c39590 c9d4d19e8011efeecfa0ce6cbcac5951 322 Gene3D G3DSA:3.40.50.720 2 146 1.1E-26 T 12-10-2018 CLSA_c39590 c9d4d19e8011efeecfa0ce6cbcac5951 322 Gene3D G3DSA:3.30.360.10 147 321 3.9E-11 T 12-10-2018 CLSA_c39590 c9d4d19e8011efeecfa0ce6cbcac5951 322 SUPERFAMILY SSF55347 142 249 4.8E-9 T 12-10-2018 CLSA_c39590 c9d4d19e8011efeecfa0ce6cbcac5951 322 SUPERFAMILY SSF51735 6 183 6.14E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c39590 c9d4d19e8011efeecfa0ce6cbcac5951 322 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 135 2.5E-17 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLSA_c34450 16201c8f4f9abd04ed51ba89d59b38bb 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 9.3E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c34450 16201c8f4f9abd04ed51ba89d59b38bb 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 9.3E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c34450 16201c8f4f9abd04ed51ba89d59b38bb 146 SMART SM00422 4 73 7.8E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c34450 16201c8f4f9abd04ed51ba89d59b38bb 146 SUPERFAMILY SSF46955 4 107 2.2E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c34450 16201c8f4f9abd04ed51ba89d59b38bb 146 Gene3D G3DSA:1.10.1660.10 2 109 2.8E-26 T 12-10-2018 CLSA_c34450 16201c8f4f9abd04ed51ba89d59b38bb 146 Pfam PF13411 MerR HTH family regulatory protein 4 71 3.1E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c11810 37196b3c75b4e0bc9e28b11895dab20c 108 Pfam PF01473 Putative cell wall binding repeat 3 20 5.1E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c11810 37196b3c75b4e0bc9e28b11895dab20c 108 SUPERFAMILY SSF69360 3 38 1.1E-6 T 12-10-2018 CLSA_c11810 37196b3c75b4e0bc9e28b11895dab20c 108 Gene3D G3DSA:2.10.270.10 1 39 1.9E-7 T 12-10-2018 CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 Pfam PF01047 MarR family 34 91 7.6E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 9.4E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 9.4E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 9.4E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 SMART SM00347 26 126 4.2E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 Gene3D G3DSA:1.10.10.10 3 144 5.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 SUPERFAMILY SSF46785 13 142 8.03E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c16780 7a16959172dec391cbdd2ed48413ea16 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 171 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.3E-64 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 SUPERFAMILY SSF56327 170 444 1.06E-88 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 3.9E-56 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 SUPERFAMILY SSF51735 5 166 3.11E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 419 2.0E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 Gene3D G3DSA:3.40.50.720 3 168 2.3E-58 T 12-10-2018 CLSA_c41580 1dcbd52affd0286ff0eb2883248e5999 444 Gene3D G3DSA:3.90.110.10 169 444 4.9E-99 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 Pfam PF14310 Fibronectin type III-like domain 607 677 9.9E-23 T 12-10-2018 IPR026891 Fibronectin type III-like domain CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 SUPERFAMILY SSF52279 338 577 3.53E-46 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 PRINTS PR00133 Glycosyl hydrolase family 3 signature 236 254 1.5E-17 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 PRINTS PR00133 Glycosyl hydrolase family 3 signature 136 152 1.5E-17 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 PRINTS PR00133 Glycosyl hydrolase family 3 signature 65 81 1.5E-17 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 PRINTS PR00133 Glycosyl hydrolase family 3 signature 90 109 1.5E-17 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 PRINTS PR00133 Glycosyl hydrolase family 3 signature 167 183 1.5E-17 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 65 303 8.1E-41 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 Gene3D G3DSA:3.20.20.300 1 310 1.3E-86 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 SUPERFAMILY SSF51445 6 337 4.11E-82 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 Gene3D G3DSA:3.40.50.1700 324 575 4.2E-61 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 Gene3D G3DSA:2.60.40.10 579 688 2.4E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 SMART SM01217 607 677 3.8E-28 T 12-10-2018 IPR026891 Fibronectin type III-like domain CLSA_c18780 fc8cc04229dcb13a7b33684c69d77f2c 689 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 338 574 4.7E-47 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 25 436 2.7E-206 T 12-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 Gene3D G3DSA:3.40.50.12240 17 438 1.6E-152 T 12-10-2018 CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 SMART SM00382 160 341 3.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 SUPERFAMILY SSF52540 95 362 6.72E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 437 3.5E-191 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 357 1.4E-76 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 88 3.4E-7 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c39330 c8101256c7e73ca03b1f8311298b353e 438 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c02650 681dcc522014fc8b556bb132a130fb48 147 Pfam PF00011 Hsp20/alpha crystallin family 46 147 2.2E-22 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain CLSA_c02650 681dcc522014fc8b556bb132a130fb48 147 Gene3D G3DSA:2.60.40.790 11 147 1.5E-33 T 12-10-2018 IPR008978 HSP20-like chaperone CLSA_c02650 681dcc522014fc8b556bb132a130fb48 147 SUPERFAMILY SSF49764 19 145 2.51E-33 T 12-10-2018 IPR008978 HSP20-like chaperone CLSA_c44020 2b8529c394b01ad70f78a580fd90294c 308 Gene3D G3DSA:1.10.3720.10 84 297 3.4E-22 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c44020 2b8529c394b01ad70f78a580fd90294c 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 8.7E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c44020 2b8529c394b01ad70f78a580fd90294c 308 SUPERFAMILY SSF161098 89 284 1.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 SUPERFAMILY SSF50677 199 387 1.05E-50 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 Gene3D G3DSA:3.40.50.620 15 616 1.7E-247 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 385 400 4.7E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 221 244 4.7E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 4.7E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 550 559 4.7E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 510 523 4.7E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 Pfam PF08264 Anticodon-binding domain of tRNA 677 828 5.9E-33 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 9 834 2.6E-291 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 SUPERFAMILY SSF47323 646 884 2.06E-51 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1037 14.043 T 12-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 Gene3D G3DSA:3.90.740.10 197 391 1.7E-247 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 SUPERFAMILY SSF47323 953 1032 5.89E-9 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 SUPERFAMILY SSF52374 11 638 3.43E-131 T 12-10-2018 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 Gene3D G3DSA:1.10.730.10 632 820 2.8E-56 T 12-10-2018 CLSA_c00620 739f1cf95b46554a29e55e80f3387ff1 1037 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 620 6.8E-186 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 Gene3D G3DSA:3.30.559.30 13 221 1.9E-20 T 12-10-2018 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 Pfam PF00668 Condensation domain 6 225 2.1E-14 T 12-10-2018 IPR001242 Condensation domain CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 SUPERFAMILY SSF56801 208 726 1.57E-138 T 12-10-2018 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 Gene3D G3DSA:3.30.300.30 651 727 1.7E-19 T 12-10-2018 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 ProSitePatterns PS00455 Putative AMP-binding domain signature. 394 405 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 270 680 1.1E-121 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 SUPERFAMILY SSF52777 15 217 1.45E-15 T 12-10-2018 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 Pfam PF00501 AMP-binding enzyme 249 657 6.4E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 Gene3D G3DSA:3.40.50.12780 242 649 1.0E-125 T 12-10-2018 CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 PRINTS PR00154 AMP-binding signature 389 400 3.0E-5 T 12-10-2018 IPR020459 AMP-binding CLSA_c09980 3be0c740331d3a6a881a284f8579d49e 740 PRINTS PR00154 AMP-binding signature 401 409 3.0E-5 T 12-10-2018 IPR020459 AMP-binding CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 SUPERFAMILY SSF46565 2 60 1.96E-24 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 SUPERFAMILY SSF48452 103 178 3.57E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 PRINTS PR00625 DnaJ domain signature 42 62 9.7E-15 T 12-10-2018 IPR001623 DnaJ domain CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 PRINTS PR00625 DnaJ domain signature 22 37 9.7E-15 T 12-10-2018 IPR001623 DnaJ domain CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 PRINTS PR00625 DnaJ domain signature 4 22 9.7E-15 T 12-10-2018 IPR001623 DnaJ domain CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 SMART SM00271 1 62 5.2E-26 T 12-10-2018 IPR001623 DnaJ domain CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 Gene3D G3DSA:1.25.40.10 92 168 4.7E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 Pfam PF00226 DnaJ domain 2 66 6.0E-20 T 12-10-2018 IPR001623 DnaJ domain CLSA_c30580 4f9a40811edca6d38ae24d9a27a9b9e5 206 Gene3D G3DSA:1.10.287.110 1 91 1.4E-23 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 Gene3D G3DSA:3.40.50.300 165 287 3.5E-10 T 12-10-2018 CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 Gene3D G3DSA:1.10.10.160 362 438 6.6E-10 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 Gene3D G3DSA:3.40.50.300 439 496 6.6E-10 T 12-10-2018 CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 SUPERFAMILY SSF52540 168 691 5.57E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 Gene3D G3DSA:3.40.50.300 526 704 2.7E-11 T 12-10-2018 CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 Pfam PF00580 UvrD/REP helicase N-terminal domain 174 497 3.3E-14 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CLSA_c20930 fe121b5ec15c3be1fab28ea9ca19baf2 855 SUPERFAMILY SSF48452 739 827 4.49E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40480 75a4f9a222683cb8ec50b1bff1274d09 503 Pfam PF07501 G5 domain 401 467 8.3E-14 T 12-10-2018 IPR011098 G5 domain CLSA_c40480 75a4f9a222683cb8ec50b1bff1274d09 503 SMART SM01208 392 469 2.0E-15 T 12-10-2018 IPR011098 G5 domain CLSA_c40480 75a4f9a222683cb8ec50b1bff1274d09 503 Pfam PF04294 VanW like protein 255 383 2.2E-52 T 12-10-2018 IPR007391 Vancomycin resistance VanW CLSA_c40480 75a4f9a222683cb8ec50b1bff1274d09 503 Pfam PF12229 Putative peptidoglycan binding domain 104 213 1.5E-20 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c40480 75a4f9a222683cb8ec50b1bff1274d09 503 Gene3D G3DSA:2.20.230.10 398 468 4.3E-11 T 12-10-2018 CLSA_c09440 1b64ef723de1ba9520ff368301492430 602 SUPERFAMILY SSF52540 28 349 5.47E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09440 1b64ef723de1ba9520ff368301492430 602 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 51 341 3.6E-18 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 Pfam PF03315 Serine dehydratase beta chain 6 131 5.1E-13 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 SUPERFAMILY SSF143548 19 137 3.14E-31 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 Pfam PF01842 ACT domain 151 211 2.9E-9 T 12-10-2018 IPR002912 ACT domain CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 207 4.2E-70 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 SUPERFAMILY SSF55021 138 217 3.24E-15 T 12-10-2018 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 Gene3D G3DSA:3.30.1330.90 13 136 9.8E-20 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 Gene3D G3DSA:3.30.70.260 148 220 4.6E-13 T 12-10-2018 CLSA_c07250 90662aa1ec2f730164bae9df910d2e2a 225 PIRSF PIRSF036692 1 221 2.4E-97 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 Pfam PF13181 Tetratricopeptide repeat 189 217 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 SMART SM00028 85 118 390.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 SMART SM00028 153 186 0.28 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 SMART SM00028 187 219 250.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 SMART SM00028 119 152 0.27 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 Gene3D G3DSA:1.25.40.10 29 230 1.5E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02430 1871ecb06496f39d397a750b0686ff24 244 SUPERFAMILY SSF48452 87 217 8.01E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c08070 a2ae82ca899daec1d299b9808395b680 283 SUPERFAMILY SSF81606 46 265 3.27E-27 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c08070 a2ae82ca899daec1d299b9808395b680 283 SMART SM00332 32 273 7.0E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c08070 a2ae82ca899daec1d299b9808395b680 283 Pfam PF13672 Protein phosphatase 2C 53 243 5.9E-10 T 12-10-2018 CLSA_c08070 a2ae82ca899daec1d299b9808395b680 283 SMART SM00331 44 276 8.8E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c08070 a2ae82ca899daec1d299b9808395b680 283 Gene3D G3DSA:3.60.40.10 31 278 4.3E-29 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 Gene3D G3DSA:1.10.10.10 132 232 6.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 SUPERFAMILY SSF52172 4 130 4.98E-39 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 SMART SM00448 4 114 9.9E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 SUPERFAMILY SSF46894 132 232 2.13E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 SMART SM00862 156 231 2.8E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 2.4E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c24590 93c5bca5983a2b2cda2d9d676f7d6888 234 Gene3D G3DSA:3.40.50.2300 1 131 5.4E-35 T 12-10-2018 CLSA_c34180 42200588c7826bb5e58741b8bb58fa1e 322 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 322 3.6E-31 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c34180 42200588c7826bb5e58741b8bb58fa1e 322 SUPERFAMILY SSF53901 4 322 7.69E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c34180 42200588c7826bb5e58741b8bb58fa1e 322 Gene3D G3DSA:3.40.47.10 2 322 1.6E-119 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c34180 42200588c7826bb5e58741b8bb58fa1e 322 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 322 2.2E-106 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c34180 42200588c7826bb5e58741b8bb58fa1e 322 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 179 6.4E-26 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c34180 42200588c7826bb5e58741b8bb58fa1e 322 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 322 59.92 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLSA_c39380 7a6074f7a028b7e74d663582797cbdb7 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 84 132 1.5E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLSA_c39380 7a6074f7a028b7e74d663582797cbdb7 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site CLSA_c39380 7a6074f7a028b7e74d663582797cbdb7 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 135 1.4E-47 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CLSA_c39380 7a6074f7a028b7e74d663582797cbdb7 135 Pfam PF00460 Flagella basal body rod protein 7 34 1.4E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 857 1.2E-296 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 1.3E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 197 208 1.3E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 224 237 1.3E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.3E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.3E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 SUPERFAMILY SSF55681 5 243 2.73E-93 T 12-10-2018 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Gene3D G3DSA:3.30.980.10 558 697 6.7E-49 T 12-10-2018 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Gene3D G3DSA:3.10.310.40 765 876 2.3E-32 T 12-10-2018 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 SUPERFAMILY SSF55186 554 713 1.57E-48 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Pfam PF02272 DHHA1 domain 736 869 1.1E-23 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Pfam PF01411 tRNA synthetases class II (A) 9 558 2.1E-194 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 SUPERFAMILY SSF50447 456 554 4.24E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 SMART SM00863 655 698 9.3E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 SUPERFAMILY SSF101353 244 439 2.22E-65 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 879 165.579 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Gene3D G3DSA:3.30.930.10 3 240 3.3E-97 T 12-10-2018 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Gene3D G3DSA:3.30.54.20 626 679 6.7E-49 T 12-10-2018 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Gene3D G3DSA:2.40.30.130 479 554 1.2E-9 T 12-10-2018 CLSA_c13270 c7aa51858212c5d9b6c508bbd9178ec0 879 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 5.8E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CLSA_c39930 7cb613677cc16977bf45ababb8f6b777 587 Pfam PF02272 DHHA1 domain 322 446 2.3E-16 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLSA_c39930 7cb613677cc16977bf45ababb8f6b777 587 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 585 8.9E-159 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CLSA_c39930 7cb613677cc16977bf45ababb8f6b777 587 SUPERFAMILY SSF64182 53 447 5.36E-107 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily CLSA_c39930 7cb613677cc16977bf45ababb8f6b777 587 Pfam PF01368 DHH family 78 217 4.1E-11 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c39930 7cb613677cc16977bf45ababb8f6b777 587 Gene3D G3DSA:3.90.1640.30 52 329 6.3E-94 T 12-10-2018 CLSA_c39930 7cb613677cc16977bf45ababb8f6b777 587 Gene3D G3DSA:3.10.310.30 331 451 8.0E-30 T 12-10-2018 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 Gene3D G3DSA:3.40.605.10 13 443 1.8E-176 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 Gene3D G3DSA:3.40.309.10 216 403 1.8E-176 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 Gene3D G3DSA:1.20.1090.10 644 862 2.9E-68 T 12-10-2018 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 Gene3D G3DSA:3.40.50.1970 449 642 2.3E-60 T 12-10-2018 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 Pfam PF00171 Aldehyde dehydrogenase family 4 396 1.4E-24 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 PIRSF PIRSF000111 1 863 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 SUPERFAMILY SSF56796 447 862 3.79E-128 T 12-10-2018 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 Pfam PF00465 Iron-containing alcohol dehydrogenase 456 847 4.8E-118 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c03350 0b03c91959a487b81a9903b1968cede9 871 SUPERFAMILY SSF53720 3 453 1.83E-78 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c12830 a883071d5bbcbc5806338f20c217c936 222 Gene3D G3DSA:3.40.50.300 1 220 4.7E-54 T 12-10-2018 CLSA_c12830 a883071d5bbcbc5806338f20c217c936 222 SUPERFAMILY SSF52540 3 213 7.05E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12830 a883071d5bbcbc5806338f20c217c936 222 Pfam PF00005 ABC transporter 19 150 3.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c12830 a883071d5bbcbc5806338f20c217c936 222 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c12830 a883071d5bbcbc5806338f20c217c936 222 SMART SM00382 27 207 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c06110 03c735cf97dda84bcef00ecf67e66bc2 229 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 229 5.8E-72 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 CLSA_c06110 03c735cf97dda84bcef00ecf67e66bc2 229 SUPERFAMILY SSF102712 157 206 8.11E-6 T 12-10-2018 CLSA_c06110 03c735cf97dda84bcef00ecf67e66bc2 229 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 178 183 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CLSA_c06110 03c735cf97dda84bcef00ecf67e66bc2 229 Pfam PF04002 RadC-like JAB domain 109 228 1.5E-45 T 12-10-2018 IPR025657 RadC-like JAB domain CLSA_c06110 03c735cf97dda84bcef00ecf67e66bc2 229 Gene3D G3DSA:3.40.140.10 104 229 1.3E-47 T 12-10-2018 CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 SUPERFAMILY SSF56519 52 376 9.42E-42 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 Gene3D G3DSA:3.90.1310.30 52 154 7.4E-10 T 12-10-2018 CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 Gene3D G3DSA:3.40.710.10 653 937 5.7E-47 T 12-10-2018 CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 362 7.8E-52 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 Gene3D G3DSA:3.90.1310.10 255 372 1.3E-24 T 12-10-2018 CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 SUPERFAMILY SSF56601 328 923 2.04E-74 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c06150 b8180e5610f0f1ed91b2bedace0d07bd 1004 Pfam PF00905 Penicillin binding protein transpeptidase domain 411 922 1.3E-53 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 Gene3D G3DSA:3.40.50.300 347 592 1.7E-85 T 12-10-2018 CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 SUPERFAMILY SSF52540 339 587 6.63E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 Gene3D G3DSA:1.20.1560.10 1 337 2.3E-90 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 SMART SM00382 376 562 1.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 SUPERFAMILY SSF90123 6 333 3.14E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 Pfam PF00664 ABC transporter transmembrane region 25 305 2.8E-47 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c19440 2ad53c27d423817bc887ee5ce83c3e88 592 Pfam PF00005 ABC transporter 368 516 1.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 Pfam PF01047 MarR family 34 88 1.0E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 SMART SM00347 24 124 5.4E-27 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 Gene3D G3DSA:1.10.10.10 4 138 4.6E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 4.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 4.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 4.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 4.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 SUPERFAMILY SSF46785 6 135 7.49E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c00640 7e6965159d7c27e4940a1370608419f7 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 97 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CLSA_c32300 3f0824398e461d00fb896dffc7c7093e 667 Pfam PF02705 K+ potassium transporter 19 558 1.8E-170 T 12-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CLSA_c32300 3f0824398e461d00fb896dffc7c7093e 667 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 10 654 27.674 T 12-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 107 123 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 107 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 SUPERFAMILY SSF55136 152 309 1.08E-23 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 Gene3D G3DSA:3.20.80.10 151 309 4.8E-32 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 SMART SM00871 150 309 5.7E-27 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 Gene3D G3DSA:1.10.10.60 77 140 4.7E-17 T 12-10-2018 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 Pfam PF12833 Helix-turn-helix domain 47 124 1.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 SUPERFAMILY SSF46689 76 128 2.44E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 Pfam PF14526 Integron-associated effector binding protein 153 308 2.9E-23 T 12-10-2018 IPR029441 Integron-associated effector binding protein CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 SUPERFAMILY SSF46689 24 74 4.12E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 SMART SM00342 40 123 9.6E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c35840 796e7376b278be35c8bfb7d08ee6c021 309 Gene3D G3DSA:1.10.10.60 17 76 7.4E-17 T 12-10-2018 CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 Pfam PF01782 RimM N-terminal domain 7 83 5.8E-20 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 Gene3D G3DSA:2.40.30.60 5 87 1.3E-18 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 158 2.7E-41 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 Pfam PF05239 PRC-barrel domain 91 161 3.6E-9 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 SUPERFAMILY SSF50346 93 160 1.18E-15 T 12-10-2018 IPR011033 PRC-barrel-like superfamily CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 Gene3D G3DSA:2.30.30.240 88 165 3.6E-14 T 12-10-2018 CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 161 21.1 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CLSA_c13990 394d456c5c863163ad5ce02f0348fea9 165 SUPERFAMILY SSF50447 4 87 1.65E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 PIRSF PIRSF006250 1 278 7.3E-96 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 274 2.8E-62 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 SUPERFAMILY SSF54675 2 108 5.1E-28 T 12-10-2018 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 Gene3D G3DSA:3.90.1170.20 12 273 1.8E-105 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 274 1.3E-101 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 Gene3D G3DSA:3.20.20.70 123 265 1.8E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 107 1.6E-27 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CLSA_c10510 01852a61866b9dffcbcee2fd60449540 280 SUPERFAMILY SSF51690 109 274 4.32E-59 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLSA_c12190 654314d8ef86f377a0083a89cf130876 453 Pfam PF08245 Mur ligase middle domain 58 287 1.7E-14 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c12190 654314d8ef86f377a0083a89cf130876 453 Pfam PF08353 Domain of unknown function (DUF1727) 326 436 1.4E-39 T 12-10-2018 IPR013564 Domain of unknown function DUF1727 CLSA_c12190 654314d8ef86f377a0083a89cf130876 453 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 56 79 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLSA_c12190 654314d8ef86f377a0083a89cf130876 453 SUPERFAMILY SSF53623 46 304 2.75E-34 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c12190 654314d8ef86f377a0083a89cf130876 453 Gene3D G3DSA:3.40.1190.10 43 307 2.1E-43 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 SUPERFAMILY SSF100950 77 236 3.98E-19 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 Pfam PF00455 DeoR C terminal sensor domain 78 235 3.2E-32 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 SUPERFAMILY SSF46785 3 59 8.78E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 SMART SM00420 6 58 4.0E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.8E-16 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 Gene3D G3DSA:1.10.10.10 1 55 1.6E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 SMART SM01134 74 237 4.3E-35 T 12-10-2018 CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.5E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c23990 de1bea1f314b861d05a4f93e111be144 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.5E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c31440 d2d83b05ac9d2b7ec77bc382511f1dd9 461 Pfam PF13786 Domain of unknown function (DUF4179) 40 129 4.5E-19 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 CLSA_c31440 d2d83b05ac9d2b7ec77bc382511f1dd9 461 Gene3D G3DSA:2.60.40.1630 71 230 4.0E-34 T 12-10-2018 CLSA_c16870 4a81a275ed83de521275bf59ea16e1e9 334 Gene3D G3DSA:1.10.10.60 214 265 1.3E-9 T 12-10-2018 CLSA_c16870 4a81a275ed83de521275bf59ea16e1e9 334 Gene3D G3DSA:1.10.10.60 266 320 2.8E-16 T 12-10-2018 CLSA_c16870 4a81a275ed83de521275bf59ea16e1e9 334 SMART SM00342 234 315 5.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c16870 4a81a275ed83de521275bf59ea16e1e9 334 Pfam PF12833 Helix-turn-helix domain 242 316 8.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c16870 4a81a275ed83de521275bf59ea16e1e9 334 SUPERFAMILY SSF46689 268 319 4.03E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c02830 d75607d59944f319efb691cdb636b26d 382 PIRSF PIRSF001434 1 382 6.5E-138 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c02830 d75607d59944f319efb691cdb636b26d 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c02830 d75607d59944f319efb691cdb636b26d 382 SUPERFAMILY SSF53383 22 381 1.86E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c02830 d75607d59944f319efb691cdb636b26d 382 Gene3D G3DSA:3.90.1150.10 249 382 1.4E-43 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c02830 d75607d59944f319efb691cdb636b26d 382 Gene3D G3DSA:3.40.640.10 5 248 1.1E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c02830 d75607d59944f319efb691cdb636b26d 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 380 1.9E-144 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.2E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 SUPERFAMILY SSF47413 3 57 7.5E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 Gene3D G3DSA:3.40.50.2300 159 327 2.6E-64 T 12-10-2018 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 Pfam PF13377 Periplasmic binding protein-like domain 168 329 9.5E-35 T 12-10-2018 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 Gene3D G3DSA:1.10.260.40 2 60 2.2E-22 T 12-10-2018 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.0E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.0E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 SUPERFAMILY SSF53822 63 330 8.39E-70 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 SMART SM00354 2 72 6.7E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c19470 609a6caaee0722c530422e332dd5988d 334 Gene3D G3DSA:3.40.50.2300 76 321 2.6E-64 T 12-10-2018 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 Gene3D G3DSA:1.20.1440.210 46 179 2.7E-28 T 12-10-2018 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 SMART SM00304 214 268 5.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 SMART SM00304 506 569 87.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 SUPERFAMILY SSF58104 236 572 8.63E-62 T 12-10-2018 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 Gene3D G3DSA:1.10.287.950 252 572 5.5E-59 T 12-10-2018 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 SMART SM00283 297 572 6.8E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 Pfam PF05227 CHASE3 domain 41 181 4.9E-36 T 12-10-2018 IPR007891 CHASE3 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 513 2.4E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.2E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 1.2E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18800 67082c3a7d1d705d4802ee78400e73cd 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 1.2E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 Pfam PF01473 Putative cell wall binding repeat 52 70 2.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 Pfam PF01841 Transglutaminase-like superfamily 185 279 1.3E-11 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 Gene3D G3DSA:3.10.620.30 159 298 1.8E-17 T 12-10-2018 CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 SUPERFAMILY SSF69360 34 88 4.19E-13 T 12-10-2018 CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 Gene3D G3DSA:2.10.270.10 25 88 1.1E-12 T 12-10-2018 CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 SUPERFAMILY SSF54001 174 289 3.08E-23 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c34720 46507d1babb071108a5fcdd1102fb9c5 319 SMART SM00460 226 282 3.9E-8 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 Gene3D G3DSA:1.10.287.950 265 554 6.3E-73 T 12-10-2018 CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 3.0E-33 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 SMART SM00304 213 265 9.9E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 SUPERFAMILY SSF58104 233 553 1.28E-65 T 12-10-2018 CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 SMART SM00283 305 552 1.0E-82 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 519 1.7E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 Gene3D G3DSA:1.20.1480.50 172 264 5.9E-15 T 12-10-2018 CLSA_c24170 50ce6770d965b1a57cf520fb2c62ea97 612 Pfam PF00672 HAMP domain 215 261 4.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 SMART SM00304 308 360 1.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 617 5.0E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 SMART SM00283 389 664 3.1E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Gene3D G3DSA:1.10.287.950 389 664 3.6E-57 T 12-10-2018 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Gene3D G3DSA:3.30.450.20 70 185 4.9E-42 T 12-10-2018 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 SUPERFAMILY SSF103190 98 194 8.89E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Pfam PF00672 HAMP domain 314 356 3.5E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Gene3D G3DSA:1.10.8.500 307 360 5.2E-5 T 12-10-2018 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Pfam PF02743 Cache domain 46 270 1.8E-34 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 Gene3D G3DSA:3.30.450.20 60 277 4.9E-42 T 12-10-2018 CLSA_c03170 1c67b7819154c88a5dc8b794b37e4502 666 SUPERFAMILY SSF58104 328 663 5.89E-64 T 12-10-2018 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Pfam PF03144 Elongation factor Tu domain 2 212 282 1.8E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Hamap MF_00071 Elongation factor 4 [lepA]. 1 603 305.905 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Gene3D G3DSA:3.30.70.870 293 374 2.0E-35 T 12-10-2018 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Pfam PF00679 Elongation factor G C-terminus 407 493 2.4E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 SUPERFAMILY SSF54980 300 377 1.12E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 SUPERFAMILY SSF52540 7 239 1.1E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Pfam PF06421 GTP-binding protein LepA C-terminus 495 601 3.8E-51 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Gene3D G3DSA:3.30.70.3380 375 486 1.8E-41 T 12-10-2018 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 PRINTS PR00315 GTP-binding elongation factor signature 13 26 8.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 PRINTS PR00315 GTP-binding elongation factor signature 97 108 8.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 PRINTS PR00315 GTP-binding elongation factor signature 81 91 8.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 PRINTS PR00315 GTP-binding elongation factor signature 133 142 8.5E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 183 1.5E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Gene3D G3DSA:3.40.50.300 8 192 4.0E-73 T 12-10-2018 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Gene3D G3DSA:2.40.30.10 193 292 4.8E-39 T 12-10-2018 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Pfam PF00009 Elongation factor Tu GTP binding domain 10 188 7.5E-53 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 SUPERFAMILY SSF54980 406 501 4.03E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 TIGRFAM TIGR01393 lepA: elongation factor 4 10 603 0.0 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 SMART SM00838 408 493 4.8E-5 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c10800 67efe104dacb2feb68066f2661f4a183 603 Gene3D G3DSA:3.30.70.2570 487 561 2.4E-34 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 SUPERFAMILY SSF52540 342 586 3.06E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 SMART SM00382 376 562 3.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 Gene3D G3DSA:3.40.50.300 346 592 3.1E-79 T 12-10-2018 CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 Pfam PF00664 ABC transporter transmembrane region 36 298 5.7E-39 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 Gene3D G3DSA:1.20.1560.10 10 332 1.5E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 Pfam PF00005 ABC transporter 367 514 2.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c19430 5fe6ce59168b7782e4cca6230f1ee444 593 SUPERFAMILY SSF90123 17 332 2.22E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c05630 7b8d4af631273d808874451d7a4b5cee 349 Gene3D G3DSA:3.10.520.20 21 349 9.6E-108 T 12-10-2018 CLSA_c05630 7b8d4af631273d808874451d7a4b5cee 349 Pfam PF02424 ApbE family 36 317 9.4E-85 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CLSA_c05630 7b8d4af631273d808874451d7a4b5cee 349 PIRSF PIRSF006268 1 343 1.4E-101 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CLSA_c05630 7b8d4af631273d808874451d7a4b5cee 349 SUPERFAMILY SSF143631 28 338 4.97E-89 T 12-10-2018 IPR003374 ApbE-like superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 831 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 870 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 845 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 876 889 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF13426 PAS domain 423 515 3.8E-10 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF13426 PAS domain 23 130 1.7E-12 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF13426 PAS domain 154 273 0.034 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF13426 PAS domain 546 643 2.1E-9 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF00512 His Kinase A (phospho-acceptor) domain 665 728 1.4E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF00072 Response regulator receiver domain 917 1026 6.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00086 89 131 14.0 T 12-10-2018 IPR001610 PAC motif CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00086 602 644 51.0 T 12-10-2018 IPR001610 PAC motif CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00086 476 516 130.0 T 12-10-2018 IPR001610 PAC motif CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00086 358 400 0.061 T 12-10-2018 IPR001610 PAC motif CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF55785 419 525 3.84E-18 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.30.450.20 403 514 8.8E-20 T 12-10-2018 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF52172 916 1030 1.85E-38 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF55785 11 129 2.26E-16 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF47226 1009 1136 2.94E-5 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00387 776 892 1.1E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.30.565.10 730 896 1.7E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.30.450.20 515 639 1.9E-27 T 12-10-2018 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF08447 PAS fold 310 393 2.4E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00091 286 352 1.3E-9 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00091 12 81 2.5E-9 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00091 408 475 1.6E-4 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00091 143 209 0.4 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00091 528 599 0.014 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF47384 650 730 3.73E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF55785 271 398 1.35E-22 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 776 891 8.4E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF55785 513 642 1.48E-22 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.30.450.20 136 278 6.2E-10 T 12-10-2018 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SUPERFAMILY SSF55874 718 890 2.1E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.30.450.20 279 398 6.5E-21 T 12-10-2018 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:1.10.287.130 640 727 4.7E-27 T 12-10-2018 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.30.450.20 2 129 2.0E-22 T 12-10-2018 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00388 664 729 3.8E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 408 521 5.0E-18 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 132 1.8E-13 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 405 9.3E-16 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 524 650 1.2E-18 T 12-10-2018 IPR000014 PAS domain CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 SMART SM00448 915 1026 3.3E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23220 1131c700f19b1416be77043e0354d959 1155 Gene3D G3DSA:3.40.50.12740 915 1062 3.2E-43 T 12-10-2018 CLSA_c17730 ea7bb4002cebed96bca22ff0fe4a0c40 469 Gene3D G3DSA:1.20.1740.10 20 461 6.1E-128 T 12-10-2018 CLSA_c17730 ea7bb4002cebed96bca22ff0fe4a0c40 469 PIRSF PIRSF006060 4 467 7.0E-94 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c17730 ea7bb4002cebed96bca22ff0fe4a0c40 469 Pfam PF13520 Amino acid permease 30 423 1.5E-57 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c44510 26458941b7eeefe112a8b40928b237a1 306 Pfam PF00005 ABC transporter 22 163 1.9E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c44510 26458941b7eeefe112a8b40928b237a1 306 Gene3D G3DSA:3.40.50.300 1 240 7.4E-65 T 12-10-2018 CLSA_c44510 26458941b7eeefe112a8b40928b237a1 306 SMART SM00382 31 212 6.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44510 26458941b7eeefe112a8b40928b237a1 306 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c44510 26458941b7eeefe112a8b40928b237a1 306 SUPERFAMILY SSF52540 4 226 2.51E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 21 688 6.7E-244 T 12-10-2018 IPR011927 Stage V sporulation protein D CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 SUPERFAMILY SSF54184 697 751 2.75E-11 T 12-10-2018 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Gene3D G3DSA:3.30.10.20 630 687 9.4E-8 T 12-10-2018 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Gene3D G3DSA:3.30.10.20 694 750 1.0E-9 T 12-10-2018 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Pfam PF03793 PASTA domain 633 688 5.8E-12 T 12-10-2018 IPR005543 PASTA domain CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Pfam PF03793 PASTA domain 697 750 1.5E-12 T 12-10-2018 IPR005543 PASTA domain CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Pfam PF00905 Penicillin binding protein transpeptidase domain 289 604 1.7E-72 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 242 6.0E-18 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 SMART SM00740 693 752 4.2E-13 T 12-10-2018 IPR005543 PASTA domain CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 SMART SM00740 629 689 3.2E-13 T 12-10-2018 IPR005543 PASTA domain CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 SUPERFAMILY SSF56601 264 618 3.27E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Gene3D G3DSA:3.90.1310.30 58 262 8.8E-40 T 12-10-2018 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Gene3D G3DSA:3.40.710.10 336 532 2.7E-101 T 12-10-2018 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 Gene3D G3DSA:3.30.450.330 264 614 2.7E-101 T 12-10-2018 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 SUPERFAMILY SSF56519 60 262 1.96E-38 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CLSA_c27330 1d4b31e9cb05a2a8372f8042516974d8 756 SUPERFAMILY SSF54184 632 688 9.94E-10 T 12-10-2018 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 SUPERFAMILY SSF51569 5 292 1.15E-97 T 12-10-2018 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 290 1.9E-104 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 SMART SM01130 5 292 2.2E-127 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 PIRSF PIRSF001365 1 294 2.3E-89 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 1.7E-94 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 Gene3D G3DSA:3.20.20.70 4 294 2.4E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 290 60.642 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 5.5E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 5.5E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 5.5E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c25350 45c8543180263ec240bcb1fe7661a62a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 5.5E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c15240 59941e2457bca106498ee4d786cdb318 594 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 4 588 9.8E-189 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 CLSA_c15240 59941e2457bca106498ee4d786cdb318 594 Gene3D G3DSA:1.20.140.70 16 167 3.7E-12 T 12-10-2018 CLSA_c15240 59941e2457bca106498ee4d786cdb318 594 SUPERFAMILY SSF55486 49 589 7.43E-88 T 12-10-2018 CLSA_c15240 59941e2457bca106498ee4d786cdb318 594 Gene3D G3DSA:1.10.1370.20 220 594 1.4E-117 T 12-10-2018 CLSA_c15240 59941e2457bca106498ee4d786cdb318 594 Pfam PF01432 Peptidase family M3 195 575 3.8E-29 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CLSA_c15240 59941e2457bca106498ee4d786cdb318 594 Pfam PF08439 Oligopeptidase F 116 175 1.6E-10 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain CLSA_c40980 3b62700061c1d26646ee991de9e5ba74 444 Pfam PF09967 VWA-like domain (DUF2201) 292 415 4.4E-14 T 12-10-2018 IPR018698 VWA-like domain CLSA_c40980 3b62700061c1d26646ee991de9e5ba74 444 SUPERFAMILY SSF53300 286 384 5.75E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c40980 3b62700061c1d26646ee991de9e5ba74 444 Pfam PF13203 Putative metallopeptidase domain 45 236 4.4E-9 T 12-10-2018 IPR025154 Putative metallopeptidase domain CLSA_c24940 bdc515e3462f9fd1860233dc79afd819 332 Gene3D G3DSA:3.100.10.20 3 80 1.1E-28 T 12-10-2018 CLSA_c24940 bdc515e3462f9fd1860233dc79afd819 332 Pfam PF01867 CRISPR associated protein Cas1 6 285 1.9E-86 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLSA_c24940 bdc515e3462f9fd1860233dc79afd819 332 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 323 1.1E-83 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLSA_c24940 bdc515e3462f9fd1860233dc79afd819 332 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 4 328 3.4E-128 T 12-10-2018 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 CLSA_c24940 bdc515e3462f9fd1860233dc79afd819 332 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 315 23.04 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLSA_c24940 bdc515e3462f9fd1860233dc79afd819 332 Gene3D G3DSA:1.20.120.920 82 329 5.5E-63 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 SUPERFAMILY SSF81665 12 776 3.27E-60 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:3.40.50.1000 304 316 5.7E-60 T 12-10-2018 IPR023214 HAD superfamily CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:3.40.50.1000 453 589 6.5E-49 T 12-10-2018 IPR023214 HAD superfamily CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Pfam PF00702 haloacid dehalogenase-like hydrolase 303 559 8.0E-24 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:1.20.1110.10 50 303 5.7E-60 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:2.70.150.10 16 209 5.7E-60 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:3.40.1110.10 414 452 6.5E-49 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:3.40.1110.10 317 337 5.7E-60 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 408 426 4.2E-7 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 517 533 4.2E-7 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 545 561 4.2E-7 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Gene3D G3DSA:1.20.1110.10 590 690 6.5E-49 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 517 633 6.8E-27 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 79 490 3.9E-41 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 309 315 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 SUPERFAMILY SSF81653 110 202 5.75E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 Pfam PF00122 E1-E2 ATPase 109 286 9.2E-40 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 307 321 1.3E-23 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 477 1.3E-23 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 568 580 1.3E-23 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 156 170 1.3E-23 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 564 1.3E-23 T 12-10-2018 CLSA_c44640 9dc3f4325566a7bce30b5af7830da09c 795 SUPERFAMILY SSF56784 303 595 2.48E-38 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c05950 b9a9191a3a26aaa78538269d0f436729 917 SUPERFAMILY SSF52540 9 896 5.13E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05950 b9a9191a3a26aaa78538269d0f436729 917 Gene3D G3DSA:3.40.50.300 700 908 8.0E-17 T 12-10-2018 CLSA_c05950 b9a9191a3a26aaa78538269d0f436729 917 Gene3D G3DSA:3.40.50.300 7 311 1.1E-19 T 12-10-2018 CLSA_c05950 b9a9191a3a26aaa78538269d0f436729 917 Pfam PF13476 AAA domain 12 238 4.1E-8 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain CLSA_c13290 2192cb7dfc8a61973f81523f5745b07c 137 Gene3D G3DSA:3.30.420.140 1 137 2.7E-49 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CLSA_c13290 2192cb7dfc8a61973f81523f5745b07c 137 Pfam PF03652 Holliday junction resolvase 2 133 1.1E-44 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLSA_c13290 2192cb7dfc8a61973f81523f5745b07c 137 SMART SM00732 1 101 2.2E-44 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CLSA_c13290 2192cb7dfc8a61973f81523f5745b07c 137 SUPERFAMILY SSF53098 2 134 3.03E-44 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c13290 2192cb7dfc8a61973f81523f5745b07c 137 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 136 26.48 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLSA_c13290 2192cb7dfc8a61973f81523f5745b07c 137 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 133 3.4E-45 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 309 559 4.6E-47 T 12-10-2018 IPR008275 CoA enzyme activase CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 SUPERFAMILY SSF53067 3 251 1.88E-27 T 12-10-2018 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 SUPERFAMILY SSF53067 308 559 7.98E-39 T 12-10-2018 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 601 815 3.3E-54 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Gene3D G3DSA:3.30.420.40 309 559 2.8E-83 T 12-10-2018 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 309 557 7.7E-36 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 240 5.8E-29 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Gene3D G3DSA:3.30.420.40 94 239 7.2E-61 T 12-10-2018 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Gene3D G3DSA:3.30.420.40 4 252 7.2E-61 T 12-10-2018 CLSA_c19160 d5c1bfd635bb32f04824fd27ce42fad4 1330 Gene3D G3DSA:3.30.420.40 403 543 2.8E-83 T 12-10-2018 CLSA_c33800 196daf0bad86d4463638656389ffe97f 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 81 194 2.9E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c33800 196daf0bad86d4463638656389ffe97f 227 Gene3D G3DSA:3.40.50.1000 5 223 2.4E-69 T 12-10-2018 IPR023214 HAD superfamily CLSA_c33800 196daf0bad86d4463638656389ffe97f 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 1.8E-24 T 12-10-2018 CLSA_c33800 196daf0bad86d4463638656389ffe97f 227 Gene3D G3DSA:1.10.150.240 16 100 2.4E-69 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLSA_c33800 196daf0bad86d4463638656389ffe97f 227 SUPERFAMILY SSF56784 3 227 5.66E-43 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c33800 196daf0bad86d4463638656389ffe97f 227 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 226 4.0E-69 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 9.8E-19 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 SUPERFAMILY SSF50447 205 304 7.66E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Gene3D G3DSA:3.40.50.300 1 205 4.0E-69 T 12-10-2018 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.0E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 1.3E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 3.6E-32 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Gene3D G3DSA:2.40.30.10 208 337 1.8E-53 T 12-10-2018 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 SUPERFAMILY SSF50465 301 396 2.01E-34 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.895 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.0E-222 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 SUPERFAMILY SSF52540 9 228 1.55E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01860 47c28ce6aa886101d266edb69be6dca9 397 Gene3D G3DSA:2.40.30.10 341 396 1.2E-28 T 12-10-2018 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 9.8E-19 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 SUPERFAMILY SSF50447 205 304 7.66E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Gene3D G3DSA:3.40.50.300 1 205 4.0E-69 T 12-10-2018 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.0E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 1.3E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 3.6E-32 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Gene3D G3DSA:2.40.30.10 208 337 1.8E-53 T 12-10-2018 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 SUPERFAMILY SSF50465 301 396 2.01E-34 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.895 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.0E-222 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 SUPERFAMILY SSF52540 9 228 1.55E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01990 47c28ce6aa886101d266edb69be6dca9 397 Gene3D G3DSA:2.40.30.10 341 396 1.2E-28 T 12-10-2018 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 SUPERFAMILY SSF52343 89 256 3.4E-28 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 SUPERFAMILY SSF63380 7 94 8.96E-16 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 PIRSF PIRSF006816 4 263 7.8E-76 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 Gene3D G3DSA:3.40.50.80 93 223 3.2E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 Pfam PF00175 Oxidoreductase NAD-binding domain 107 207 1.3E-12 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 PRINTS PR00406 Cytochrome B5 reductase signature 105 124 2.1E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 PRINTS PR00406 Cytochrome B5 reductase signature 143 154 2.1E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 PRINTS PR00406 Cytochrome B5 reductase signature 81 95 2.1E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 226 256 5.6E-7 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 Gene3D G3DSA:2.40.30.10 8 92 2.8E-10 T 12-10-2018 CLSA_c26550 3b36b5d89a7586240291368fcf9e6d2b 263 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 3 263 2.0E-138 T 12-10-2018 IPR014260 Sulphite reductase, subunit B CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 Gene3D G3DSA:3.40.50.1860 7 245 3.4E-78 T 12-10-2018 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 Gene3D G3DSA:3.40.50.1860 97 209 3.4E-78 T 12-10-2018 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 Hamap MF_00258 Glutamate racemase [murI]. 6 255 33.606 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 209 4.7E-28 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 SUPERFAMILY SSF53681 7 109 1.5E-32 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 SUPERFAMILY SSF53681 112 256 5.36E-29 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c00480 eba4a6c3701186ea3cef6714f6cc0801 261 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 244 2.7E-66 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 Pfam PF02863 Arginine repressor, C-terminal domain 80 145 1.2E-22 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 Gene3D G3DSA:1.10.10.10 3 65 7.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 TIGRFAM TIGR01529 argR_whole: arginine repressor 4 146 5.5E-43 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 PRINTS PR01467 Bacterial arginine repressor signature 36 51 1.5E-21 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 PRINTS PR01467 Bacterial arginine repressor signature 117 132 1.5E-21 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 PRINTS PR01467 Bacterial arginine repressor signature 20 33 1.5E-21 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 PRINTS PR01467 Bacterial arginine repressor signature 87 100 1.5E-21 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 Gene3D G3DSA:3.30.1360.40 67 147 9.3E-22 T 12-10-2018 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 SUPERFAMILY SSF55252 79 146 2.35E-16 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 Hamap MF_00173 Arginine repressor [argR]. 1 150 57.279 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 SUPERFAMILY SSF46785 2 75 2.27E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 86 144 3.0E-12 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CLSA_c26810 a638e2cf5de85778e03805787f3235ee 150 Pfam PF01316 Arginine repressor, DNA binding domain 2 65 1.8E-23 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CLSA_c17310 f80cc5300206fd45bb87bca8cd4e2a2a 163 Pfam PF02559 CarD-like/TRCF domain 2 112 1.0E-14 T 12-10-2018 IPR003711 CarD-like/TRCF domain CLSA_c17310 f80cc5300206fd45bb87bca8cd4e2a2a 163 SMART SM01058 1 115 3.6E-13 T 12-10-2018 IPR003711 CarD-like/TRCF domain CLSA_c17310 f80cc5300206fd45bb87bca8cd4e2a2a 163 Gene3D G3DSA:1.20.58.1290 65 162 3.9E-17 T 12-10-2018 CLSA_c17310 f80cc5300206fd45bb87bca8cd4e2a2a 163 Gene3D G3DSA:2.30.30.840 1 64 4.8E-23 T 12-10-2018 CLSA_c17310 f80cc5300206fd45bb87bca8cd4e2a2a 163 SUPERFAMILY SSF141259 2 66 1.83E-11 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily CLSA_c20240 33bde64b7f611e8871b5c3d263c993a2 309 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c20240 33bde64b7f611e8871b5c3d263c993a2 309 SMART SM00382 29 210 2.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c20240 33bde64b7f611e8871b5c3d263c993a2 309 SUPERFAMILY SSF52540 3 226 7.89E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20240 33bde64b7f611e8871b5c3d263c993a2 309 Pfam PF00005 ABC transporter 22 161 7.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c20240 33bde64b7f611e8871b5c3d263c993a2 309 Gene3D G3DSA:3.40.50.300 1 241 1.2E-58 T 12-10-2018 CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 Gene3D G3DSA:3.40.50.300 7 273 1.5E-105 T 12-10-2018 CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 Pfam PF13361 UvrD-like helicase C-terminal domain 276 612 6.1E-72 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 Gene3D G3DSA:1.10.10.160 111 186 1.5E-105 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 SUPERFAMILY SSF52540 6 638 2.92E-172 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 6 760 1.3E-286 T 12-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 271 3.8E-81 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 Gene3D G3DSA:3.40.50.300 279 630 1.1E-121 T 12-10-2018 CLSA_c03810 3f2fe032d670fbc36480851a3faf63ce 763 Gene3D G3DSA:1.10.486.10 382 545 1.1E-121 T 12-10-2018 CLSA_c09660 79b4728af9d1fa9186f45cd45a5ae5c9 303 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 217 2.9E-88 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CLSA_c09660 79b4728af9d1fa9186f45cd45a5ae5c9 303 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 303 5.5E-116 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 SUPERFAMILY SSF58104 251 588 7.59E-58 T 12-10-2018 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 SMART SM01049 43 137 7.3E-27 T 12-10-2018 IPR033480 Single Cache domain 2 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 SMART SM00283 284 588 1.7E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 Gene3D G3DSA:1.10.287.950 254 588 4.2E-57 T 12-10-2018 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 Gene3D G3DSA:3.30.450.20 42 197 7.6E-45 T 12-10-2018 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 380 540 1.8E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42770 998107b68718a4c4252dd865a5b20019 589 Pfam PF17200 Single Cache domain 2 49 196 4.4E-44 T 12-10-2018 IPR033480 Single Cache domain 2 CLSA_c24000 682da2244beaba82653471f3024b1196 331 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.3E-46 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 329 1.3E-130 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 SUPERFAMILY SSF53671 4 330 1.83E-103 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 327 8.5E-57 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 Gene3D G3DSA:3.40.50.1370 151 316 2.2E-143 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 Gene3D G3DSA:3.40.50.1370 5 326 2.2E-143 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 3.7E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 3.7E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00102 Ornithine carbamoyltransferase signature 308 319 3.7E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 3.7E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c24000 682da2244beaba82653471f3024b1196 331 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 3.7E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c24000 682da2244beaba82653471f3024b1196 331 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 330 82.587 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 PIRSF PIRSF000124 16 434 9.3E-73 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 PIRSF PIRSF500136 6 437 1.3E-165 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 Gene3D G3DSA:3.40.50.720 2 212 6.5E-69 T 12-10-2018 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 216 306 7.1E-31 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 17 194 9.4E-46 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 Gene3D G3DSA:3.40.50.720 215 435 6.6E-66 T 12-10-2018 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 SUPERFAMILY SSF52413 319 426 1.83E-25 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 SMART SM00984 333 428 2.0E-25 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 SUPERFAMILY SSF48179 215 308 7.99E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 17 424 3.5E-137 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 333 427 1.5E-21 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c41650 1f24fa9ed544eeaaa78c53cca4dffc4c 438 SUPERFAMILY SSF51735 17 208 6.03E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 4.0E-93 T 12-10-2018 CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.0E-140 T 12-10-2018 IPR033752 MetA family CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 SUPERFAMILY SSF52317 17 297 6.11E-100 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 42.616 T 12-10-2018 IPR033752 MetA family CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 Gene3D G3DSA:3.40.50.880 1 301 3.4E-128 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 PIRSF PIRSF000450 1 304 5.4E-149 T 12-10-2018 IPR033752 MetA family CLSA_c31870 8524063bd4afc35c76c4156c527cfd83 304 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 2.1E-142 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 CLSA_c09810 017a1e9f6698ed84b4082835c726ba44 105 Pfam PF00872 Transposase, Mutator family 1 102 7.2E-31 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c09810 017a1e9f6698ed84b4082835c726ba44 105 ProSitePatterns PS01007 Transposases, Mutator family, signature. 46 70 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 SMART SM00387 360 471 6.9E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 7.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 7.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 7.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 Gene3D G3DSA:1.20.1480.50 149 243 2.0E-13 T 12-10-2018 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 SUPERFAMILY SSF47384 236 316 2.35E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 315 1.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 Gene3D G3DSA:3.30.565.10 322 471 8.5E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 SMART SM00388 248 315 3.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 Gene3D G3DSA:1.10.287.130 244 320 3.5E-19 T 12-10-2018 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 468 1.0E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 SUPERFAMILY SSF158472 189 235 7.59E-8 T 12-10-2018 CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 SUPERFAMILY SSF55874 305 469 2.1E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32370 9054b6871ce18d707c07877034b08dbc 472 SMART SM00304 188 240 3.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 136 159 - T 12-10-2018 IPR025505 FHIPEP conserved site CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 Pfam PF00771 FHIPEP family 25 679 2.3E-269 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 Gene3D G3DSA:1.10.8.540 497 585 9.7E-30 T 12-10-2018 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 131 147 9.6E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 9.6E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 150 168 9.6E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 180 197 9.6E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 231 245 9.6E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 9.6E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 Gene3D G3DSA:3.40.30.60 353 496 1.8E-52 T 12-10-2018 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 15 686 1.2E-258 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 PIRSF PIRSF005419 5 688 1.2E-253 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLSA_c39210 de6e8598e28f1cc44645d97947f588d4 688 Gene3D G3DSA:1.10.490.80 588 685 1.1E-24 T 12-10-2018 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 SMART SM00388 540 612 7.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Pfam PF00512 His Kinase A (phospho-acceptor) domain 542 612 2.5E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 SUPERFAMILY SSF55785 258 387 2.27E-5 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Gene3D G3DSA:3.30.450.20 393 526 1.7E-10 T 12-10-2018 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 SMART SM00387 658 770 4.1E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 SUPERFAMILY SSF47384 529 612 4.9E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Gene3D G3DSA:3.30.450.20 261 392 2.9E-10 T 12-10-2018 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 SUPERFAMILY SSF55874 601 773 4.19E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Gene3D G3DSA:3.30.565.10 619 775 1.3E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 723 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 730 748 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 767 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 709 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Gene3D G3DSA:1.10.287.130 527 614 6.0E-18 T 12-10-2018 CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 659 769 2.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 SUPERFAMILY SSF55785 424 527 4.71E-5 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c32650 e28b6b6a023f69a882c58fdcc58e4b13 800 Pfam PF17159 Membrane-associated sensor domain 25 251 2.3E-79 T 12-10-2018 IPR033425 Membrane-associated sensor domain MASE3 CLSA_c33470 d34bea2797a7a7dcdfe63ccd34977ee9 114 Pfam PF13630 SdpI/YhfL protein family 24 94 8.9E-16 T 12-10-2018 IPR025962 SdpI/YhfL protein family CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 Gene3D G3DSA:3.30.450.20 150 289 5.8E-29 T 12-10-2018 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 SUPERFAMILY SSF58104 328 664 1.57E-65 T 12-10-2018 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 SMART SM00283 368 664 4.3E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 Pfam PF00672 HAMP domain 310 354 4.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 Pfam PF02743 Cache domain 35 269 6.5E-32 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 SMART SM00304 308 360 4.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 Gene3D G3DSA:1.10.287.950 394 664 3.6E-57 T 12-10-2018 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 618 6.5E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 Gene3D G3DSA:1.10.8.500 306 356 3.9E-9 T 12-10-2018 CLSA_c20800 d88a5c31cf78cd2159fe0d527b58ab23 665 SUPERFAMILY SSF103190 63 186 1.73E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c23740 75840053e4af36e5593e16f7a21d7188 126 Gene3D G3DSA:3.10.180.10 8 126 3.8E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c23740 75840053e4af36e5593e16f7a21d7188 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CLSA_c23740 75840053e4af36e5593e16f7a21d7188 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 4.2E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLSA_c23740 75840053e4af36e5593e16f7a21d7188 126 SUPERFAMILY SSF54593 1 126 7.52E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 Pfam PF02378 Phosphotransferase system, EIIC 10 345 9.9E-63 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 Gene3D G3DSA:3.30.1360.60 442 520 7.8E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 459 476 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 520 1.6E-221 T 12-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 408 506 7.3E-18 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 Pfam PF00367 phosphotransferase system, EIIB 449 479 1.1E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c41610 926d0c498458d3f293bd3f7e40735739 520 SUPERFAMILY SSF55604 447 519 1.7E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 Gene3D G3DSA:1.10.1040.10 191 276 1.2E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 SUPERFAMILY SSF51735 2 181 7.68E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 6.7E-68 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 SUPERFAMILY SSF48179 183 282 2.81E-34 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 PIRSF PIRSF000105 1 282 8.8E-97 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 181 205 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 Gene3D G3DSA:3.40.50.720 1 187 1.4E-72 T 12-10-2018 CLSA_c03600 dc62843948f34dc592b95197471d3e70 282 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 3.4E-37 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 Pfam PF13306 Leucine rich repeats (6 copies) 143 267 9.0E-43 T 12-10-2018 IPR026906 Leucine rich repeat 5 CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 Gene3D G3DSA:3.80.10.10 220 341 9.7E-39 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 Pfam PF01473 Putative cell wall binding repeat 46 64 0.0056 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 Pfam PF01473 Putative cell wall binding repeat 66 84 1.3E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 Gene3D G3DSA:3.80.10.10 112 219 4.7E-33 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 Gene3D G3DSA:2.10.270.10 20 111 3.3E-17 T 12-10-2018 CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 SUPERFAMILY SSF52058 136 316 9.52E-28 T 12-10-2018 CLSA_c34140 1927dc9d7355076153a333e1eb2dba36 343 SUPERFAMILY SSF69360 24 100 4.32E-20 T 12-10-2018 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.977 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 8.0E-59 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 Pfam PF00572 Ribosomal protein L13 14 138 1.5E-54 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 Gene3D G3DSA:3.90.1180.10 1 142 1.8E-59 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 PIRSF PIRSF002181 1 143 1.7E-48 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLSA_c02370 7749d4a083f3255aa944d45be09990d9 144 SUPERFAMILY SSF52161 4 142 2.88E-57 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c26530 39852f489a852179bddeb5228b951407 695 Gene3D G3DSA:2.20.25.90 1 50 3.3E-13 T 12-10-2018 CLSA_c26530 39852f489a852179bddeb5228b951407 695 Gene3D G3DSA:2.40.40.20 569 693 6.7E-25 T 12-10-2018 CLSA_c26530 39852f489a852179bddeb5228b951407 695 SUPERFAMILY SSF50692 549 689 1.15E-26 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CLSA_c26530 39852f489a852179bddeb5228b951407 695 Pfam PF00384 Molybdopterin oxidoreductase 64 481 2.7E-64 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c26530 39852f489a852179bddeb5228b951407 695 Pfam PF01568 Molydopterin dinucleotide binding domain 578 684 1.3E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CLSA_c26530 39852f489a852179bddeb5228b951407 695 SMART SM00926 1 54 1.9E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c26530 39852f489a852179bddeb5228b951407 695 Gene3D G3DSA:3.40.228.10 136 333 1.2E-144 T 12-10-2018 CLSA_c26530 39852f489a852179bddeb5228b951407 695 SUPERFAMILY SSF53706 2 561 3.14E-151 T 12-10-2018 CLSA_c26530 39852f489a852179bddeb5228b951407 695 Gene3D G3DSA:3.40.50.740 67 531 1.2E-144 T 12-10-2018 CLSA_c26530 39852f489a852179bddeb5228b951407 695 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 51 1.1E-13 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c26530 39852f489a852179bddeb5228b951407 695 PIRSF PIRSF000144 465 693 3.8E-6 T 12-10-2018 CLSA_c26530 39852f489a852179bddeb5228b951407 695 PIRSF PIRSF000144 57 421 2.9E-30 T 12-10-2018 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 Pfam PF01726 LexA DNA binding domain 5 65 1.5E-23 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 SUPERFAMILY SSF46785 6 70 6.58E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 Gene3D G3DSA:2.10.109.10 86 201 1.1E-32 T 12-10-2018 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 TIGRFAM TIGR00498 lexA: repressor LexA 2 200 5.3E-63 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 Gene3D G3DSA:1.10.10.10 5 68 2.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 Hamap MF_00015 LexA repressor [lexA]. 3 201 28.483 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 SUPERFAMILY SSF51306 79 199 1.92E-29 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 1.3E-6 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 1.3E-6 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 1.3E-6 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c15680 69a7397ed4701e6a3682ac634a64af58 201 Pfam PF00717 Peptidase S24-like 120 183 1.5E-8 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 Gene3D G3DSA:3.40.605.10 17 409 1.6E-171 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 Pfam PF00171 Aldehyde dehydrogenase family 10 281 4.2E-15 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 Pfam PF00171 Aldehyde dehydrogenase family 310 404 1.0E-7 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 43.366 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 Gene3D G3DSA:3.40.309.10 224 372 1.6E-171 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 SUPERFAMILY SSF53720 7 414 3.27E-118 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.3E-159 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLSA_c00400 33073d289a6bb2089c38bb95169caf03 414 PIRSF PIRSF000151 1 414 1.1E-186 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CLSA_c11910 ba80a1b07276e13df03d3c1ab902f938 764 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 171 2.0E-49 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal CLSA_c11910 ba80a1b07276e13df03d3c1ab902f938 764 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 540 744 2.3E-39 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal CLSA_c11910 ba80a1b07276e13df03d3c1ab902f938 764 Pfam PF12698 ABC-2 family transporter protein 20 739 1.4E-11 T 12-10-2018 CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 SUPERFAMILY SSF46785 2 56 3.34E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 Pfam PF08279 HTH domain 5 54 2.0E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 Pfam PF13280 WYL domain 133 307 2.9E-27 T 12-10-2018 IPR026881 WYL domain CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 SMART SM00420 5 60 5.3E-4 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 PIRSF PIRSF016838 79 314 5.7E-18 T 12-10-2018 IPR028349 Protein PafC CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 PIRSF PIRSF016838 1 53 4.7E-4 T 12-10-2018 IPR028349 Protein PafC CLSA_c15110 8b2a52a12516e0cea4bfb23ee740c489 315 Gene3D G3DSA:1.10.10.10 1 59 4.6E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 34.121 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Gene3D G3DSA:3.90.190.20 335 482 8.5E-56 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Pfam PF01225 Mur ligase family, catalytic domain 22 97 2.0E-13 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 481 2.2E-154 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Gene3D G3DSA:3.40.1390.10 2 99 2.7E-29 T 12-10-2018 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 414 1.3E-19 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Pfam PF08245 Mur ligase middle domain 109 309 1.5E-51 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 SUPERFAMILY SSF63418 3 98 2.35E-23 T 12-10-2018 IPR035911 MurE/MurF, N-terminal CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 SUPERFAMILY SSF53623 100 326 8.9E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 Gene3D G3DSA:3.40.1190.10 100 333 1.2E-77 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c31470 c047990c5b99a2477d654d8626efef17 482 SUPERFAMILY SSF53244 329 481 6.41E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c42370 fe1ef705d5e6abe93e2a579ba3fe1616 220 Pfam PF02397 Bacterial sugar transferase 27 214 9.4E-69 T 12-10-2018 IPR003362 Bacterial sugar transferase CLSA_c42370 fe1ef705d5e6abe93e2a579ba3fe1616 220 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 16 219 7.9E-90 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 Gene3D G3DSA:1.25.40.10 183 263 5.8E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 SMART SM00028 148 181 50.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 SMART SM00028 80 113 4.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 SMART SM00028 222 255 0.39 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 SMART SM00028 184 217 86.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 SUPERFAMILY SSF48452 81 257 5.88E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 Gene3D G3DSA:1.25.40.10 71 182 1.8E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 188 247 2.5E-6 T 12-10-2018 CLSA_c23480 841cedd2780f8260b581b8e44894abf9 266 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 98 172 2.7E-6 T 12-10-2018 CLSA_c18930 965c776cd2cc69c3d9e30477d626c361 156 SMART SM00347 26 129 2.2E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c18930 965c776cd2cc69c3d9e30477d626c361 156 Pfam PF01047 MarR family 36 91 1.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c18930 965c776cd2cc69c3d9e30477d626c361 156 Gene3D G3DSA:1.10.10.10 1 146 3.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c18930 965c776cd2cc69c3d9e30477d626c361 156 SUPERFAMILY SSF46785 5 148 6.03E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Gene3D G3DSA:3.30.450.40 26 209 3.3E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 SUPERFAMILY SSF46689 558 659 2.24E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Pfam PF01590 GAF domain 74 197 1.5E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Pfam PF00158 Sigma-54 interaction domain 344 511 1.1E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 368 381 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 558 567 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 SUPERFAMILY SSF55785 210 274 3.81E-8 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Pfam PF02954 Bacterial regulatory protein, Fis family 617 657 2.1E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 431 446 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Gene3D G3DSA:1.10.8.60 516 579 1.6E-17 T 12-10-2018 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 SMART SM00382 364 515 6.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 623 640 4.8E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 640 660 4.8E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Gene3D G3DSA:3.30.450.20 224 328 2.7E-10 T 12-10-2018 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Gene3D G3DSA:3.40.50.300 331 515 3.3E-67 T 12-10-2018 CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 SUPERFAMILY SSF52540 343 575 1.06E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c16130 9984370c4c7ac89d322ea7ae921787eb 662 Gene3D G3DSA:1.10.10.60 593 659 4.2E-14 T 12-10-2018 CLSA_c30310 794f16e6af309073c10cb0b607f7a899 96 Gene3D G3DSA:1.10.260.40 1 96 1.5E-26 T 12-10-2018 CLSA_c30310 794f16e6af309073c10cb0b607f7a899 96 SUPERFAMILY SSF47413 2 67 4.02E-22 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c30310 794f16e6af309073c10cb0b607f7a899 96 Pfam PF01381 Helix-turn-helix 6 60 8.2E-21 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30310 794f16e6af309073c10cb0b607f7a899 96 SMART SM00530 5 60 1.2E-20 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 Pfam PF01584 CheW-like domain 16 148 3.5E-23 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 SMART SM00260 11 146 6.4E-19 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 Gene3D G3DSA:2.30.30.40 17 140 7.5E-24 T 12-10-2018 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 SMART SM00448 171 294 4.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 SUPERFAMILY SSF52172 167 299 1.85E-26 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 Pfam PF00072 Response regulator receiver domain 174 294 1.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 PIRSF PIRSF002867 1 300 7.7E-90 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 SUPERFAMILY SSF50341 5 150 1.02E-28 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 Gene3D G3DSA:3.40.50.2300 167 300 1.3E-27 T 12-10-2018 CLSA_c14950 0c890c6170ac72d912703d0ca62b12f2 300 Gene3D G3DSA:2.40.50.180 32 146 7.5E-24 T 12-10-2018 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 Pfam PF01979 Amidohydrolase family 66 348 1.4E-32 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 TIGRFAM TIGR01178 ade: adenine deaminase 20 587 1.6E-186 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 Hamap MF_01518 Adenine deaminase [ade]. 20 586 37.006 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 SUPERFAMILY SSF51556 70 318 1.21E-39 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 Gene3D G3DSA:2.30.40.10 15 349 8.2E-118 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 SUPERFAMILY SSF51338 18 351 3.17E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 Pfam PF13382 Adenine deaminase C-terminal domain 427 583 8.4E-57 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CLSA_c31890 9ce84132c9b3f9ee8298c2b18655db81 589 Gene3D G3DSA:3.20.20.140 70 313 8.2E-118 T 12-10-2018 CLSA_c20090 f8605df0119ff3c2b27a2ce2f2e0bc65 223 SUPERFAMILY SSF52540 3 221 3.06E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20090 f8605df0119ff3c2b27a2ce2f2e0bc65 223 Gene3D G3DSA:3.40.50.300 1 223 3.1E-67 T 12-10-2018 CLSA_c20090 f8605df0119ff3c2b27a2ce2f2e0bc65 223 Pfam PF00005 ABC transporter 23 169 2.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c20090 f8605df0119ff3c2b27a2ce2f2e0bc65 223 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c20090 f8605df0119ff3c2b27a2ce2f2e0bc65 223 SMART SM00382 32 218 3.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36540 e3381a78bea0c38d56193e3f65dc482e 390 Gene3D G3DSA:1.10.340.30 170 287 4.8E-6 T 12-10-2018 CLSA_c36540 e3381a78bea0c38d56193e3f65dc482e 390 Pfam PF01548 Transposase 4 160 9.5E-50 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CLSA_c36540 e3381a78bea0c38d56193e3f65dc482e 390 SUPERFAMILY SSF48150 175 288 3.45E-6 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLSA_c36540 e3381a78bea0c38d56193e3f65dc482e 390 Pfam PF02371 Transposase IS116/IS110/IS902 family 268 351 1.6E-27 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.5E-38 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.5E-38 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.5E-38 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 4.0E-20 T 12-10-2018 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 Gene3D G3DSA:1.10.720.90 2 55 1.9E-20 T 12-10-2018 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 Gene3D G3DSA:1.10.1900.20 56 119 2.3E-27 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 SUPERFAMILY SSF74731 3 115 1.96E-45 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.372 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.7E-47 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27400 1866da84069c81ddefa94aad404a1c5e 119 Pfam PF00453 Ribosomal protein L20 3 109 1.3E-44 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 SUPERFAMILY SSF53955 139 287 2.56E-39 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 Pfam PF00959 Phage lysozyme 167 276 2.1E-15 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 Pfam PF01471 Putative peptidoglycan binding domain 11 64 4.7E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 Pfam PF01471 Putative peptidoglycan binding domain 66 119 4.0E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 Gene3D G3DSA:1.10.530.40 135 287 1.8E-41 T 12-10-2018 CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 Gene3D G3DSA:1.10.101.10 68 129 4.5E-19 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 Gene3D G3DSA:1.10.101.10 1 67 1.3E-19 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 SUPERFAMILY SSF47090 66 120 5.49E-17 T 12-10-2018 IPR036365 PGBD-like superfamily CLSA_c37320 ab1aa002670aca6df17d8017aec246ae 291 SUPERFAMILY SSF47090 2 64 8.89E-16 T 12-10-2018 IPR036365 PGBD-like superfamily CLSA_c40410 8f4dd9a3005b552fe137c2575fdf89fd 248 Gene3D G3DSA:3.20.20.70 1 248 9.8E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c40410 8f4dd9a3005b552fe137c2575fdf89fd 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 3.7E-58 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40410 8f4dd9a3005b552fe137c2575fdf89fd 248 SUPERFAMILY SSF51351 1 247 4.71E-96 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40410 8f4dd9a3005b552fe137c2575fdf89fd 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40410 8f4dd9a3005b552fe137c2575fdf89fd 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 61.523 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40410 8f4dd9a3005b552fe137c2575fdf89fd 248 Pfam PF00121 Triosephosphate isomerase 5 246 4.1E-94 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 SUPERFAMILY SSF55174 1 88 5.15E-11 T 12-10-2018 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 Pfam PF01479 S4 domain 1 44 2.1E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 250 2.4E-40 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 Gene3D G3DSA:3.10.290.10 1 58 2.4E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 SMART SM00363 1 64 1.7E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 Pfam PF00849 RNA pseudouridylate synthase 62 218 4.5E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 SUPERFAMILY SSF55120 60 257 1.17E-41 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 Gene3D G3DSA:3.30.70.1560 128 236 1.2E-52 T 12-10-2018 CLSA_c22070 d4d5c4f8f5d1a615a6de46d1074615ca 263 Gene3D G3DSA:3.30.70.580 62 254 1.2E-52 T 12-10-2018 CLSA_c35780 29f7d078a04840caae25370af2c7172b 295 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c35780 29f7d078a04840caae25370af2c7172b 295 Pfam PF00005 ABC transporter 19 161 4.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c35780 29f7d078a04840caae25370af2c7172b 295 SMART SM00382 26 208 7.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c35780 29f7d078a04840caae25370af2c7172b 295 Gene3D G3DSA:3.40.50.300 1 235 4.5E-61 T 12-10-2018 CLSA_c35780 29f7d078a04840caae25370af2c7172b 295 SUPERFAMILY SSF52540 2 222 5.78E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 356 373 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 393 406 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 168 188 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 61 85 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 99 113 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 319 341 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 PRINTS PR00906 SecA protein signature 115 125 3.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Gene3D G3DSA:1.10.3060.10 571 776 0.0 T 12-10-2018 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 SUPERFAMILY SSF52540 396 569 4.7E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 SMART SM00958 226 338 4.1E-65 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Gene3D G3DSA:3.10.450.50 826 858 4.1E-7 T 12-10-2018 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 SMART SM00957 4 382 1.4E-285 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Pfam PF01043 SecA preprotein cross-linking domain 230 338 1.3E-40 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Pfam PF07516 SecA Wing and Scaffold domain 568 778 7.8E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 SUPERFAMILY SSF81886 571 846 3.14E-75 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 781 19.832 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 SUPERFAMILY SSF52540 4 395 2.24E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 12-10-2018 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 12-10-2018 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Pfam PF07517 SecA DEAD-like domain 5 382 1.1E-131 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 12-10-2018 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 ProSitePatterns PS01312 SecA family signature. 480 495 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 12-10-2018 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 Pfam PF02810 SEC-C motif 838 856 9.3E-10 T 12-10-2018 IPR004027 SEC-C motif CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 1.8E-234 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLSA_c05370 9f0590ceec5247b827cb4c77f9f7fbd5 858 SUPERFAMILY SSF81767 225 348 1.31E-45 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 CLSA_c22840 9d151650a826f508c956e2f6fde399f9 201 Pfam PF07553 Host cell surface-exposed lipoprotein 103 149 1.6E-24 T 12-10-2018 IPR011434 Domain of unknown function DUF1535 CLSA_c22840 9d151650a826f508c956e2f6fde399f9 201 Pfam PF07553 Host cell surface-exposed lipoprotein 152 199 3.3E-25 T 12-10-2018 IPR011434 Domain of unknown function DUF1535 CLSA_c22840 9d151650a826f508c956e2f6fde399f9 201 Gene3D G3DSA:1.10.10.10 151 200 2.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c22840 9d151650a826f508c956e2f6fde399f9 201 Gene3D G3DSA:1.10.10.10 102 150 2.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 7 565 4.8E-267 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 Pfam PF11842 Domain of unknown function (DUF3362) 519 661 4.7E-37 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 Pfam PF08497 Radical SAM N-terminal 7 303 6.4E-133 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 Pfam PF04055 Radical SAM superfamily 305 510 4.0E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 Gene3D G3DSA:3.80.30.20 303 563 8.9E-15 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 SMART SM00729 300 551 1.4E-13 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 SUPERFAMILY SSF102114 305 548 6.87E-18 T 12-10-2018 CLSA_c15390 24ebb581b346f15ba155079ecd6c5f7e 666 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 7 566 51.801 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SMART SM00316 646 728 1.2E-17 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Gene3D G3DSA:2.40.50.140 84 156 3.7E-17 T 12-10-2018 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Gene3D G3DSA:2.40.50.140 157 225 2.9E-10 T 12-10-2018 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SUPERFAMILY SSF50249 648 725 4.07E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SMART SM00955 270 599 5.6E-181 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SUPERFAMILY SSF50249 231 646 4.91E-145 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Pfam PF00773 RNB domain 270 598 9.4E-117 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Pfam PF00575 S1 RNA binding domain 645 726 4.5E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 728 1.8E-272 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Gene3D G3DSA:2.40.50.140 649 746 1.7E-22 T 12-10-2018 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SMART SM00357 94 155 2.9E-12 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SMART SM00357 160 224 1.8E-8 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Hamap MF_01895 Ribonuclease R [rnr]. 41 728 57.068 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 85 727 2.4E-221 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SUPERFAMILY SSF50249 148 247 5.92E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Pfam PF08206 Ribonuclease B OB domain 95 154 4.2E-18 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 Pfam PF08206 Ribonuclease B OB domain 169 223 1.1E-10 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CLSA_c40350 9bc0ff570521cb2477ad0fd51f240718 748 SUPERFAMILY SSF50249 88 157 2.75E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 905 1220 7.1E-37 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 SUPERFAMILY SSF53067 6 255 7.48E-55 T 12-10-2018 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Gene3D G3DSA:3.30.420.40 416 559 2.8E-84 T 12-10-2018 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 322 575 3.1E-40 T 12-10-2018 IPR008275 CoA enzyme activase CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 255 1.7E-22 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 322 576 4.4E-38 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Gene3D G3DSA:3.30.420.40 98 242 2.0E-68 T 12-10-2018 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Gene3D G3DSA:3.30.420.40 322 576 2.8E-84 T 12-10-2018 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 SUPERFAMILY SSF53067 321 576 5.44E-55 T 12-10-2018 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Gene3D G3DSA:3.30.420.40 7 255 2.0E-68 T 12-10-2018 CLSA_c14970 ff93c8ba99fb6cc397772c57c303e4ce 1404 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 672 890 5.9E-79 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:1.10.1200.10 1412 1497 6.6E-12 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 SUPERFAMILY SSF52777 255 493 1.08E-29 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:3.30.300.30 918 999 5.6E-11 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:3.30.559.30 252 501 5.1E-67 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 SUPERFAMILY SSF53335 1142 1286 6.29E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 SUPERFAMILY SSF53474 1518 1810 9.02E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Pfam PF08242 Methyltransferase domain 1166 1265 2.4E-12 T 12-10-2018 IPR013217 Methyltransferase type 12 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 SUPERFAMILY SSF56801 500 1422 7.98E-116 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Pfam PF00501 AMP-binding enzyme 536 923 4.0E-78 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 SUPERFAMILY SSF52777 68 265 2.56E-19 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 ProSitePatterns PS00455 Putative AMP-binding domain signature. 665 676 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 550 948 5.3E-113 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Pfam PF00668 Condensation domain 103 505 3.2E-39 T 12-10-2018 IPR001242 Condensation domain CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:1.10.10.1830 3 56 1.3E-11 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:3.40.50.12780 525 916 2.1E-97 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 SUPERFAMILY SSF47336 1409 1456 3.91E-7 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:3.40.50.150 1040 1322 1.2E-32 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:3.30.300.30 1323 1403 2.1E-13 T 12-10-2018 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Pfam PF00975 Thioesterase domain 1521 1625 3.6E-7 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Gene3D G3DSA:3.30.559.10 65 246 2.6E-39 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c16940 ac714c3410c222ed34b64b29d6db2f63 1811 Pfam PF00550 Phosphopantetheine attachment site 1417 1457 6.3E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 Gene3D G3DSA:2.40.50.620 32 97 1.1E-15 T 12-10-2018 CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 38.868 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 5 204 7.9E-88 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 Pfam PF00297 Ribosomal protein L3 97 182 2.5E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 SUPERFAMILY SSF50447 2 208 7.33E-80 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c02010 08f5b82c17a2c30fdff464fc17f59130 209 Gene3D G3DSA:2.40.30.10 128 209 1.1E-14 T 12-10-2018 CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 SMART SM00862 151 227 8.0E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 Pfam PF00072 Response regulator receiver domain 5 114 4.2E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 Gene3D G3DSA:3.40.50.2300 1 130 3.5E-40 T 12-10-2018 CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 SMART SM00448 3 113 1.3E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 Gene3D G3DSA:1.10.10.10 131 227 6.3E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 SUPERFAMILY SSF46894 127 227 5.67E-31 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 SUPERFAMILY SSF52172 2 129 3.7E-42 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c16330 f71e386861cfec4294ecf999c78f5f39 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 1.7E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 SUPERFAMILY SSF88946 7 98 6.02E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 SUPERFAMILY SSF88659 107 174 5.61E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 Pfam PF04542 Sigma-70 region 2 22 89 3.8E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 Pfam PF08281 Sigma-70, region 4 117 169 3.8E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 172 9.1E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 Gene3D G3DSA:1.10.1740.10 3 85 2.1E-16 T 12-10-2018 CLSA_c15380 1082ca39de4727b11ecdef7440d06cd4 178 Gene3D G3DSA:1.10.10.10 110 176 1.1E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c13440 49725e42ba399030d7d5f000c4205f53 87 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 8 77 4.3E-21 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH CLSA_c13440 49725e42ba399030d7d5f000c4205f53 87 SUPERFAMILY SSF50346 7 77 8.63E-11 T 12-10-2018 IPR011033 PRC-barrel-like superfamily CLSA_c13440 49725e42ba399030d7d5f000c4205f53 87 Gene3D G3DSA:2.30.30.240 5 81 1.1E-8 T 12-10-2018 CLSA_c13440 49725e42ba399030d7d5f000c4205f53 87 Pfam PF05239 PRC-barrel domain 8 79 1.9E-9 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 632 5.4E-221 T 12-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 SUPERFAMILY SSF55604 7 80 2.62E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 Pfam PF02378 Phosphotransferase system, EIIC 108 389 3.5E-31 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 Gene3D G3DSA:2.70.70.10 475 634 2.0E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 Gene3D G3DSA:3.30.1360.60 1 77 1.8E-29 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 550 562 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 488 611 8.0E-51 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 488 608 8.4E-45 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 Pfam PF00367 phosphotransferase system, EIIB 8 41 3.0E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c17860 302cb641c8ce64c4269aea751d1a420f 634 SUPERFAMILY SSF51261 479 632 5.58E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 ProSitePatterns PS00211 ABC transporters family signature. 541 555 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 Gene3D G3DSA:3.40.50.300 402 636 4.0E-95 T 12-10-2018 CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 Gene3D G3DSA:1.20.1560.10 9 358 1.3E-85 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 SMART SM00382 429 621 5.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 SUPERFAMILY SSF52540 393 637 2.78E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 SUPERFAMILY SSF90123 30 355 1.44E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 Pfam PF00005 ABC transporter 420 569 1.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c44320 b5c1e8080e8a857aa39e79bddef06f48 643 Pfam PF00664 ABC transporter transmembrane region 49 325 8.3E-40 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 SMART SM00387 255 366 2.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 208 4.6E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 Gene3D G3DSA:3.30.565.10 212 368 5.9E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 SUPERFAMILY SSF55874 214 363 8.15E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 SMART SM00388 143 210 6.0E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 SUPERFAMILY SSF47384 128 211 1.67E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 363 8.8E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 Gene3D G3DSA:1.10.287.130 80 205 2.2E-17 T 12-10-2018 CLSA_c16360 885f5087d875a14d25e3bf4c8b318ab6 369 SUPERFAMILY SSF158472 87 133 2.62E-5 T 12-10-2018 CLSA_c29300 862645939db7334ed066ee613bca8543 99 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 40 86 1.6E-13 T 12-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 CLSA_c29300 862645939db7334ed066ee613bca8543 99 PIRSF PIRSF037246 17 93 7.8E-34 T 12-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 CLSA_c29300 862645939db7334ed066ee613bca8543 99 Gene3D G3DSA:2.30.31.70 19 96 5.6E-31 T 12-10-2018 CLSA_c33820 7921454150e0cd0d377a72c157a8571a 219 SUPERFAMILY SSF52777 1 211 1.89E-63 T 12-10-2018 CLSA_c33820 7921454150e0cd0d377a72c157a8571a 219 Gene3D G3DSA:3.30.559.10 1 208 1.3E-65 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c33820 7921454150e0cd0d377a72c157a8571a 219 Pfam PF00302 Chloramphenicol acetyltransferase 2 205 6.7E-66 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLSA_c33820 7921454150e0cd0d377a72c157a8571a 219 PIRSF PIRSF000440 1 214 6.0E-72 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLSA_c33820 7921454150e0cd0d377a72c157a8571a 219 SMART SM01059 1 205 4.1E-88 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLSA_c33820 7921454150e0cd0d377a72c157a8571a 219 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 8 204 3.0E-38 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLSA_c38260 1177d709236903503fa051e6574e9a15 417 Pfam PF06277 Ethanolamine utilisation protein EutA 2 416 4.8E-133 T 12-10-2018 IPR009377 Ethanolamine utilisation EutA CLSA_c38260 1177d709236903503fa051e6574e9a15 417 SUPERFAMILY SSF53067 93 178 9.15E-5 T 12-10-2018 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 Gene3D G3DSA:2.10.109.10 392 509 4.5E-36 T 12-10-2018 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 463 475 3.5E-6 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 435 446 3.5E-6 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 424 434 3.5E-6 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 TIGRFAM TIGR00498 lexA: repressor LexA 380 509 7.4E-34 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 SUPERFAMILY SSF51306 387 508 3.66E-31 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 Gene3D G3DSA:3.40.50.300 1 178 3.6E-14 T 12-10-2018 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 Pfam PF00717 Peptidase S24-like 427 494 8.7E-12 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 Gene3D G3DSA:3.40.50.300 179 279 1.0E-5 T 12-10-2018 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 273 9.5E-14 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CLSA_c23730 1aafc3c05222a9175b8f55ae19704d48 509 SUPERFAMILY SSF52540 1 263 2.18E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 Gene3D G3DSA:3.20.20.20 36 123 9.8E-10 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 SUPERFAMILY SSF54862 135 267 9.07E-21 T 12-10-2018 CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 194 28.091 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 98 7.2E-24 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 Pfam PF04060 Putative Fe-S cluster 44 77 3.5E-11 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 Pfam PF13187 4Fe-4S dicluster domain 171 233 1.8E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 Gene3D G3DSA:3.30.70.20 146 197 8.7E-14 T 12-10-2018 CLSA_c05620 2d5c8f5cdef77f66521935b0ed1c66df 269 Gene3D G3DSA:3.30.70.20 205 269 3.8E-9 T 12-10-2018 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 SUPERFAMILY SSF63520 65 174 8.63E-29 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Gene3D G3DSA:2.30.24.10 2 73 9.5E-18 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 SUPERFAMILY SSF63520 179 278 2.35E-26 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 SMART SM01061 9 67 6.2E-18 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Gene3D G3DSA:1.20.890.100 174 229 1.0E-17 T 12-10-2018 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Gene3D G3DSA:1.20.58.1950 230 279 6.3E-13 T 12-10-2018 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 SUPERFAMILY SSF50151 10 62 2.62E-13 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Pfam PF03123 CAT RNA binding domain 11 63 1.4E-16 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Gene3D G3DSA:1.10.1790.10 75 173 1.3E-29 T 12-10-2018 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Pfam PF00874 PRD domain 190 277 1.2E-22 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c43890 2f032aee75552a678891a4b4a5e5a854 285 Pfam PF00874 PRD domain 84 170 1.6E-24 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c16630 f83333977672f68cb17ed0b9f1f923d8 280 SMART SM00062 47 274 4.6E-43 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c16630 f83333977672f68cb17ed0b9f1f923d8 280 Gene3D G3DSA:3.40.190.10 42 266 7.8E-51 T 12-10-2018 CLSA_c16630 f83333977672f68cb17ed0b9f1f923d8 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 269 5.6E-52 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c16630 f83333977672f68cb17ed0b9f1f923d8 280 Gene3D G3DSA:3.40.190.10 136 229 7.8E-51 T 12-10-2018 CLSA_c16630 f83333977672f68cb17ed0b9f1f923d8 280 SUPERFAMILY SSF53850 1 269 1.04E-52 T 12-10-2018 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 SUPERFAMILY SSF47384 241 318 4.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 SMART SM00388 255 320 2.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 Gene3D G3DSA:1.10.287.130 250 319 1.1E-16 T 12-10-2018 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 3.1E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 SMART SM00387 364 475 2.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 2.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 2.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 2.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 Gene3D G3DSA:1.20.1480.50 162 249 1.4E-13 T 12-10-2018 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 SMART SM00304 195 247 7.9E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 471 5.4E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 SUPERFAMILY SSF55874 329 471 1.27E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 Gene3D G3DSA:3.30.565.10 326 474 2.4E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c03740 6e4c6b351f27b9fd79e1f353bf132da3 475 SUPERFAMILY SSF158472 197 246 2.62E-7 T 12-10-2018 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 533 551 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Gene3D G3DSA:3.40.50.300 180 369 3.9E-58 T 12-10-2018 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 SUPERFAMILY SSF52540 183 444 2.63E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 SUPERFAMILY SSF52540 451 753 2.09E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Gene3D G3DSA:3.40.50.300 454 668 2.3E-79 T 12-10-2018 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 SMART SM01086 669 758 5.4E-19 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Gene3D G3DSA:1.10.1780.10 2 139 3.3E-29 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Gene3D G3DSA:1.10.8.60 670 762 6.7E-19 T 12-10-2018 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 355 3.2E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 673 747 2.0E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 14 57 3.6E-7 T 12-10-2018 IPR004176 Clp, N-terminal CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Pfam PF07724 AAA domain (Cdc48 subfamily) 501 663 1.8E-45 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 4 750 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 Gene3D G3DSA:1.10.8.60 370 453 6.2E-31 T 12-10-2018 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 SUPERFAMILY SSF81923 3 137 2.62E-30 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 1.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 610 624 1.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 506 524 1.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 577 595 1.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 SMART SM00382 502 638 6.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c38760 27ea29ed4238367e03ba18487df65d06 762 SMART SM00382 221 364 6.6E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c28670 9738ff81302331ee29ef0ea4aac8c6dc 198 Gene3D G3DSA:3.60.15.10 1 198 9.7E-68 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c28670 9738ff81302331ee29ef0ea4aac8c6dc 198 SUPERFAMILY SSF56281 6 198 2.36E-54 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c28670 9738ff81302331ee29ef0ea4aac8c6dc 198 SMART SM00849 12 182 3.6E-40 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c28670 9738ff81302331ee29ef0ea4aac8c6dc 198 Pfam PF00753 Metallo-beta-lactamase superfamily 11 182 8.5E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 SUPERFAMILY SSF52794 170 271 1.92E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.6E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 173 254 7.2E-32 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 SUPERFAMILY SSF55804 1 148 1.83E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.8E-37 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 Pfam PF02378 Phosphotransferase system, EIIC 299 589 8.3E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 283 642 2.2E-117 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 Gene3D G3DSA:3.40.930.10 1 154 8.4E-48 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 173 263 1.2E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c22160 1b2812259802aa8ab347d24adcbb6467 647 Gene3D G3DSA:3.40.50.2300 159 271 2.1E-42 T 12-10-2018 CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 SMART SM00382 369 555 3.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 Pfam PF00005 ABC transporter 361 509 1.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 SUPERFAMILY SSF90123 17 330 5.62E-52 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 Gene3D G3DSA:1.20.1560.10 2 331 2.7E-46 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 SUPERFAMILY SSF52540 340 578 4.88E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 Gene3D G3DSA:3.40.50.300 335 591 1.8E-84 T 12-10-2018 CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 Pfam PF00664 ABC transporter transmembrane region 29 293 8.3E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c18250 d233b57544faa979d61d6383ee20687b 599 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 8 250 4.4E-58 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 Gene3D G3DSA:2.40.240.20 1 69 4.7E-19 T 12-10-2018 CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 SUPERFAMILY SSF88697 1 69 4.47E-13 T 12-10-2018 IPR015947 PUA-like superfamily CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 Pfam PF04452 RNA methyltransferase 18 245 4.1E-71 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 Gene3D G3DSA:3.40.1280.10 72 253 2.3E-60 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 PIRSF PIRSF015601 1 250 2.6E-61 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CLSA_c10900 7d9a9ab7ff4521789bb4c4eff1bcc6f1 255 SUPERFAMILY SSF75217 72 250 5.23E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases CLSA_c42080 d63600658460317edace3ab4be771aa0 378 Gene3D G3DSA:3.40.50.2000 172 357 1.5E-63 T 12-10-2018 CLSA_c42080 d63600658460317edace3ab4be771aa0 378 Gene3D G3DSA:3.40.50.2000 23 368 1.5E-63 T 12-10-2018 CLSA_c42080 d63600658460317edace3ab4be771aa0 378 Pfam PF13477 Glycosyl transferase 4-like 3 137 4.4E-10 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c42080 d63600658460317edace3ab4be771aa0 378 Pfam PF00534 Glycosyl transferases group 1 187 348 1.7E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c42080 d63600658460317edace3ab4be771aa0 378 SUPERFAMILY SSF53756 3 370 2.41E-62 T 12-10-2018 CLSA_c38130 a66ae3a6493bc437171f20f2d8c4d342 205 Pfam PF01674 Lipase (class 2) 38 140 2.3E-11 T 12-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CLSA_c38130 a66ae3a6493bc437171f20f2d8c4d342 205 SUPERFAMILY SSF53474 37 195 7.46E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c38130 a66ae3a6493bc437171f20f2d8c4d342 205 Gene3D G3DSA:3.40.50.1820 36 205 3.2E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 SUPERFAMILY SSF47384 518 598 7.65E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 Gene3D G3DSA:3.30.565.10 601 750 1.1E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 SMART SM00387 643 750 6.5E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 SUPERFAMILY SSF55874 586 735 1.26E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 SMART SM00388 531 597 4.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 Gene3D G3DSA:1.10.287.130 524 596 4.4E-20 T 12-10-2018 CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 532 597 1.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c24580 542e399c505085692dc6550a0632b3c5 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 644 735 1.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00369 78 100 16.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00369 255 276 35.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00369 299 324 6.1 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00369 233 254 50.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 Pfam PF12799 Leucine Rich repeats (2 copies) 79 118 2.8E-9 T 12-10-2018 IPR025875 Leucine rich repeat 4 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 Pfam PF12799 Leucine Rich repeats (2 copies) 256 297 2.3E-7 T 12-10-2018 IPR025875 Leucine rich repeat 4 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 Pfam PF12799 Leucine Rich repeats (2 copies) 301 334 5.8E-7 T 12-10-2018 IPR025875 Leucine rich repeat 4 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 Gene3D G3DSA:3.80.10.10 1 171 8.0E-30 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 Gene3D G3DSA:3.80.10.10 172 348 1.2E-40 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 78 99 0.04 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 211 232 24.0 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 277 298 450.0 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 299 320 0.34 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 255 276 26.0 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 100 121 200.0 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 321 347 470.0 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SMART SM00365 233 254 0.093 T 12-10-2018 CLSA_c36470 162715eb2a24f31b79f0821d2b39d2aa 350 SUPERFAMILY SSF52058 17 339 2.04E-52 T 12-10-2018 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.8E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.0E-44 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 SMART SM01134 74 233 4.8E-51 T 12-10-2018 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 SUPERFAMILY SSF100950 75 234 1.36E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 SMART SM00420 6 58 1.3E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c41130 cfcb031b82bed569ca08c26bf09aeed2 255 SUPERFAMILY SSF46785 4 67 1.87E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 Pfam PF12002 MgsA AAA+ ATPase C terminal 249 412 1.2E-60 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 SMART SM00382 37 152 4.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 Pfam PF16193 AAA C-terminal domain 174 248 3.4E-18 T 12-10-2018 IPR032423 AAA C-terminal domain CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 Gene3D G3DSA:1.10.3710.10 327 414 1.2E-21 T 12-10-2018 CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 SUPERFAMILY SSF52540 2 206 9.75E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 Gene3D G3DSA:1.20.272.10 224 326 1.6E-36 T 12-10-2018 CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 Gene3D G3DSA:3.40.50.300 1 151 1.4E-40 T 12-10-2018 CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 127 2.5E-14 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CLSA_c13200 d8b102cf76d561b4f9cc2b0f46d7e572 414 SUPERFAMILY SSF48019 234 413 4.08E-64 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CLSA_c10280 7381807cddeb41da2ede2ee017b920e6 283 Gene3D G3DSA:1.10.10.10 2 85 6.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10280 7381807cddeb41da2ede2ee017b920e6 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 81 3.1E-22 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c10280 7381807cddeb41da2ede2ee017b920e6 283 SUPERFAMILY SSF53697 90 264 1.25E-32 T 12-10-2018 CLSA_c10280 7381807cddeb41da2ede2ee017b920e6 283 SUPERFAMILY SSF46689 6 81 1.42E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c10280 7381807cddeb41da2ede2ee017b920e6 283 Pfam PF01380 SIS domain 131 257 1.8E-17 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c10280 7381807cddeb41da2ede2ee017b920e6 283 Gene3D G3DSA:3.40.50.10490 98 281 6.3E-38 T 12-10-2018 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 1.1E-38 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 6.3E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 374 1.9E-48 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 PIRSF PIRSF016578 2 378 1.1E-26 T 12-10-2018 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 SUPERFAMILY SSF56645 2 242 1.57E-91 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 Gene3D G3DSA:2.40.110.10 121 234 1.9E-45 T 12-10-2018 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 SUPERFAMILY SSF47203 227 377 3.87E-57 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 Gene3D G3DSA:1.20.140.10 235 377 1.8E-54 T 12-10-2018 CLSA_c19080 b1a760a1c679184d42de8464aab54b6e 380 Gene3D G3DSA:1.10.540.10 1 120 2.4E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CLSA_c16680 2b691eb8eacdff7f295b874d72ddcedb 74 Pfam PF07872 Protein of unknown function (DUF1659) 8 51 1.4E-20 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 SUPERFAMILY SSF52518 348 527 1.31E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 SUPERFAMILY SSF52922 532 662 5.89E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 Pfam PF02780 Transketolase, C-terminal domain 544 653 9.0E-13 T 12-10-2018 IPR033248 Transketolase, C-terminal domain CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 4.4E-146 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 SUPERFAMILY SSF52518 4 324 2.67E-109 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 Gene3D G3DSA:3.40.50.970 4 333 2.8E-117 T 12-10-2018 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 Gene3D G3DSA:3.40.50.920 536 663 1.6E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 Gene3D G3DSA:3.40.50.970 334 529 3.5E-72 T 12-10-2018 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 662 1.4E-283 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 2.0E-43 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c32970 1dbeea520847ac3230c23bc2bc4f1b25 663 SMART SM00861 354 525 9.1E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Gene3D G3DSA:3.30.230.80 249 379 3.8E-40 T 12-10-2018 CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 156 2.5E-10 T 12-10-2018 CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PRINTS PR00775 90kDa heat shock protein signature 92 109 4.4E-35 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PRINTS PR00775 90kDa heat shock protein signature 190 208 4.4E-35 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PRINTS PR00775 90kDa heat shock protein signature 119 141 4.4E-35 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PRINTS PR00775 90kDa heat shock protein signature 172 189 4.4E-35 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PRINTS PR00775 90kDa heat shock protein signature 74 91 4.4E-35 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PRINTS PR00775 90kDa heat shock protein signature 25 47 4.4E-35 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Gene3D G3DSA:3.30.565.10 10 212 4.6E-63 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 SUPERFAMILY SSF110942 520 639 7.19E-10 T 12-10-2018 IPR037196 HSP90, C-terminal domain CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 PIRSF PIRSF002583 2 644 8.0E-156 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Gene3D G3DSA:1.20.120.790 502 644 2.8E-12 T 12-10-2018 IPR037196 HSP90, C-terminal domain CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Gene3D G3DSA:3.30.70.2140 213 235 4.6E-63 T 12-10-2018 CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 SUPERFAMILY SSF55874 4 213 3.27E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Pfam PF00183 Hsp90 protein 186 643 1.3E-61 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 SUPERFAMILY SSF54211 247 494 2.5E-67 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c38840 1bf6f4cef061c69629fee0f1d85a445d 645 Gene3D G3DSA:3.40.50.12450 381 492 7.8E-20 T 12-10-2018 CLSA_c31770 b09527e7b3de306ccf8980aca646231d 503 Gene3D G3DSA:3.55.50.10 118 183 2.6E-6 T 12-10-2018 CLSA_c31770 b09527e7b3de306ccf8980aca646231d 503 Gene3D G3DSA:2.30.110.50 86 117 2.6E-6 T 12-10-2018 CLSA_c31770 b09527e7b3de306ccf8980aca646231d 503 SUPERFAMILY SSF69279 6 192 6.23E-16 T 12-10-2018 CLSA_c31770 b09527e7b3de306ccf8980aca646231d 503 Pfam PF05954 Phage late control gene D protein (GPD) 87 186 4.1E-6 T 12-10-2018 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 SMART SM00267 634 806 6.5E-34 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Gene3D G3DSA:3.30.450.20 347 477 8.2E-20 T 12-10-2018 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 SUPERFAMILY SSF55781 479 640 3.05E-21 T 12-10-2018 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Gene3D G3DSA:3.30.450.40 480 640 1.8E-20 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Pfam PF13426 PAS domain 241 337 0.54 T 12-10-2018 IPR000014 PAS domain CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 351 469 3.3E-11 T 12-10-2018 IPR000014 PAS domain CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Gene3D G3DSA:3.30.70.270 641 805 2.7E-39 T 12-10-2018 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Pfam PF00989 PAS fold 351 461 1.6E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 SUPERFAMILY SSF55073 650 797 2.43E-36 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Pfam PF13185 GAF domain 493 632 3.6E-12 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 SMART SM00091 230 298 200.0 T 12-10-2018 IPR000014 PAS domain CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 SMART SM00091 350 416 5.5E-5 T 12-10-2018 IPR000014 PAS domain CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 645 802 1.6E-34 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Pfam PF16927 N-terminal 7TM region of histidine kinase 11 229 1.5E-57 T 12-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Gene3D G3DSA:3.30.450.20 231 337 4.1E-7 T 12-10-2018 CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 SUPERFAMILY SSF55785 335 462 2.44E-17 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c21830 a778c81ce0edafb98258e35c784fc055 806 Pfam PF00990 Diguanylate cyclase, GGDEF domain 646 798 2.6E-31 T 12-10-2018 IPR000160 GGDEF domain CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 SMART SM00448 5 116 8.1E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 Gene3D G3DSA:1.10.260.40 130 199 1.7E-20 T 12-10-2018 CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 SUPERFAMILY SSF52172 3 128 5.55E-18 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 Pfam PF01381 Helix-turn-helix 141 195 1.1E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 Gene3D G3DSA:3.40.50.2300 6 129 6.1E-19 T 12-10-2018 CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 SUPERFAMILY SSF47413 134 199 5.89E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 SMART SM00530 140 195 1.3E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c11180 f0a2c8a33783f4a2f421a7202b934724 208 Pfam PF00072 Response regulator receiver domain 7 116 1.2E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40640 ac5a9352c42fb6d5d967ff05769d2792 195 SUPERFAMILY SSF47240 3 134 8.12E-30 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c40640 ac5a9352c42fb6d5d967ff05769d2792 195 Gene3D G3DSA:2.20.28.10 134 177 4.0E-18 T 12-10-2018 CLSA_c40640 ac5a9352c42fb6d5d967ff05769d2792 195 Gene3D G3DSA:1.20.1260.10 1 133 5.7E-40 T 12-10-2018 IPR012347 Ferritin-like CLSA_c40640 ac5a9352c42fb6d5d967ff05769d2792 195 Pfam PF02915 Rubrerythrin 10 124 2.5E-15 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLSA_c40640 ac5a9352c42fb6d5d967ff05769d2792 195 SUPERFAMILY SSF57802 137 174 2.54E-11 T 12-10-2018 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 SMART SM00861 353 524 1.1E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 Gene3D G3DSA:3.40.50.970 335 532 4.2E-73 T 12-10-2018 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 Pfam PF02779 Transketolase, pyrimidine binding domain 352 523 7.0E-45 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 Gene3D G3DSA:3.40.50.920 535 661 3.7E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 335 1.1E-143 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 Pfam PF02780 Transketolase, C-terminal domain 543 652 1.8E-13 T 12-10-2018 IPR033248 Transketolase, C-terminal domain CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 SUPERFAMILY SSF52518 4 324 5.44E-107 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 Gene3D G3DSA:3.40.50.970 4 334 1.7E-114 T 12-10-2018 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 659 8.2E-283 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 SUPERFAMILY SSF52922 530 661 2.22E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c07600 a23f2b857d153e626b682b6fb35ead3b 667 SUPERFAMILY SSF52518 346 526 3.75E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 462 1.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 SMART SM00304 188 240 1.2E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 SMART SM00388 241 308 2.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 Gene3D G3DSA:3.30.565.10 314 464 2.6E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 Gene3D G3DSA:1.10.8.500 187 235 1.5E-11 T 12-10-2018 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 SMART SM00387 354 464 6.4E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 308 1.6E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 Pfam PF00672 HAMP domain 191 236 1.3E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 SUPERFAMILY SSF158472 190 237 3.01E-10 T 12-10-2018 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 Gene3D G3DSA:1.10.287.130 236 313 8.3E-21 T 12-10-2018 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 5.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 5.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 5.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 5.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 SUPERFAMILY SSF47384 224 309 1.37E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c36060 c53b8030af0626cef1e2deea1a7ead80 464 SUPERFAMILY SSF55874 297 462 7.73E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c19570 ba4ac131e3056fe7669f899b5fec0207 227 SUPERFAMILY SSF158560 7 93 1.28E-18 T 12-10-2018 CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 SUPERFAMILY SSF88659 112 173 5.98E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 171 2.0E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 Gene3D G3DSA:1.10.10.10 111 174 1.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 Pfam PF04542 Sigma-70 region 2 29 96 1.4E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 SUPERFAMILY SSF88946 14 111 1.06E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 Gene3D G3DSA:1.10.1740.10 8 110 1.7E-20 T 12-10-2018 CLSA_c31450 8626ddc828d5ac45b8a33005929b2a54 175 Pfam PF08281 Sigma-70, region 4 117 168 6.0E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c44520 a37027199375c6bdd6833c97c2468eb6 243 SUPERFAMILY SSF52218 1 156 2.48E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c44520 a37027199375c6bdd6833c97c2468eb6 243 Gene3D G3DSA:3.40.50.360 1 242 2.9E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c44520 a37027199375c6bdd6833c97c2468eb6 243 Pfam PF03358 NADPH-dependent FMN reductase 18 153 3.0E-18 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 400 418 3.3E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 362 378 6.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 300 318 5.5E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 280 298 8.7E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 341 358 0.02 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 380 398 2.9E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 261 276 0.028 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01473 Putative cell wall binding repeat 320 338 1.0E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Gene3D G3DSA:3.40.630.40 468 668 3.0E-52 T 12-10-2018 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 472 665 1.3E-46 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 SUPERFAMILY SSF69360 259 456 4.24E-67 T 12-10-2018 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 70 199 8.2E-13 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 SMART SM00646 541 665 2.1E-34 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 SUPERFAMILY SSF53187 470 666 2.92E-45 T 12-10-2018 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Gene3D G3DSA:2.10.270.10 379 457 8.2E-25 T 12-10-2018 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Gene3D G3DSA:2.10.270.10 246 318 2.3E-19 T 12-10-2018 CLSA_c41520 5926195a2c2aa0ddc3edcb94873bd9f6 668 Gene3D G3DSA:2.10.270.10 319 378 2.7E-22 T 12-10-2018 CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 Gene3D G3DSA:3.30.230.10 73 165 2.5E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 SUPERFAMILY SSF54211 79 158 1.59E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 Gene3D G3DSA:3.30.160.20 1 72 2.5E-32 T 12-10-2018 CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 34.276 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 9.8E-67 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 1.1E-30 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 SUPERFAMILY SSF54768 7 75 4.29E-24 T 12-10-2018 CLSA_c02190 41f24ecfecc2f57e362892b522f82f2e 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 85 156 3.2E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 Gene3D G3DSA:2.40.50.530 1 64 3.1E-24 T 12-10-2018 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.6E-21 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.6E-21 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.6E-21 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 Pfam PF01632 Ribosomal protein L35 2 62 2.2E-26 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.3E-27 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.553 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLSA_c27410 b9a240e9de12bb696af66fb863567170 65 SUPERFAMILY SSF143034 2 64 1.44E-24 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c20920 772a4ca816929405e97f51f3601e4698 335 SUPERFAMILY SSF63825 163 294 2.22E-6 T 12-10-2018 CLSA_c02380 59d0aae01d7b688a903377e51d49becc 130 Gene3D G3DSA:3.30.230.10 1 130 1.4E-52 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c02380 59d0aae01d7b688a903377e51d49becc 130 SUPERFAMILY SSF54211 5 130 3.79E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c02380 59d0aae01d7b688a903377e51d49becc 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CLSA_c02380 59d0aae01d7b688a903377e51d49becc 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.4E-47 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CLSA_c02380 59d0aae01d7b688a903377e51d49becc 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.029 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CLSA_c13340 8028d7fd28a95f3a8471d177daf1c9fe 341 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 10 341 29.511 T 12-10-2018 IPR003770 Endolytic murein transglycosylase CLSA_c13340 8028d7fd28a95f3a8471d177daf1c9fe 341 Pfam PF02618 YceG-like family 46 337 1.9E-72 T 12-10-2018 IPR003770 Endolytic murein transglycosylase CLSA_c13340 8028d7fd28a95f3a8471d177daf1c9fe 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 11 337 7.8E-67 T 12-10-2018 IPR003770 Endolytic murein transglycosylase CLSA_c28340 e276e1e9a856dd062fa3393a32aabf07 446 Pfam PF10442 FIST C domain 304 429 1.6E-12 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CLSA_c28340 e276e1e9a856dd062fa3393a32aabf07 446 Pfam PF08495 FIST N domain 101 299 1.9E-31 T 12-10-2018 IPR013702 FIST domain, N-terminal CLSA_c28340 e276e1e9a856dd062fa3393a32aabf07 446 SMART SM01204 301 431 3.2E-12 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CLSA_c28340 e276e1e9a856dd062fa3393a32aabf07 446 SMART SM00897 99 300 3.1E-38 T 12-10-2018 IPR013702 FIST domain, N-terminal CLSA_c45050 4f303eb0166f0a78695366bba756e1b3 159 Gene3D G3DSA:3.40.1280.10 1 159 5.4E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLSA_c45050 4f303eb0166f0a78695366bba756e1b3 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 5.1E-61 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CLSA_c45050 4f303eb0166f0a78695366bba756e1b3 159 PIRSF PIRSF004505 1 159 2.7E-56 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CLSA_c45050 4f303eb0166f0a78695366bba756e1b3 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 3.3E-52 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CLSA_c45050 4f303eb0166f0a78695366bba756e1b3 159 SUPERFAMILY SSF75217 1 157 2.81E-59 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases CLSA_c45050 4f303eb0166f0a78695366bba756e1b3 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.776 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CLSA_c00830 312a45eec678a31504d943884ef87b23 63 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 4.9E-10 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLSA_c00830 312a45eec678a31504d943884ef87b23 63 PRINTS PR00352 3Fe-4S ferredoxin signature 47 59 4.9E-10 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLSA_c00830 312a45eec678a31504d943884ef87b23 63 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 4.9E-10 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLSA_c00830 312a45eec678a31504d943884ef87b23 63 SUPERFAMILY SSF54862 3 61 1.32E-13 T 12-10-2018 CLSA_c00830 312a45eec678a31504d943884ef87b23 63 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 5 61 1.3E-17 T 12-10-2018 CLSA_c00830 312a45eec678a31504d943884ef87b23 63 Gene3D G3DSA:3.30.70.20 1 63 1.3E-20 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Pfam PF13246 Cation transport ATPase (P-type) 368 451 1.3E-9 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Gene3D G3DSA:3.40.1110.10 333 515 2.6E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 SUPERFAMILY SSF81660 334 515 9.59E-28 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 SUPERFAMILY SSF81665 4 833 1.96E-17 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Gene3D G3DSA:2.70.150.10 16 228 2.6E-82 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 71 1.3E-5 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Gene3D G3DSA:1.20.1110.10 55 708 2.6E-82 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 SUPERFAMILY SSF81653 115 224 8.76E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Gene3D G3DSA:3.40.50.1000 320 654 2.6E-82 T 12-10-2018 IPR023214 HAD superfamily CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 Pfam PF00122 E1-E2 ATPase 112 292 2.0E-27 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 SUPERFAMILY SSF56784 500 653 6.95E-19 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 2.2E-8 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 519 2.2E-8 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 2.2E-8 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 645 2.2E-8 T 12-10-2018 CLSA_c10720 7f833d03487285d3d6a7a6e353e2a331 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 629 2.2E-8 T 12-10-2018 CLSA_c05720 a117f7e1072ae364a94e9cc001d1734a 238 Gene3D G3DSA:3.30.420.40 95 188 6.7E-53 T 12-10-2018 CLSA_c05720 a117f7e1072ae364a94e9cc001d1734a 238 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 218 6.3E-53 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CLSA_c05720 a117f7e1072ae364a94e9cc001d1734a 238 Pfam PF00814 Glycoprotease family 24 155 3.5E-25 T 12-10-2018 IPR000905 Gcp-like domain CLSA_c05720 a117f7e1072ae364a94e9cc001d1734a 238 SUPERFAMILY SSF53067 108 211 5.44E-13 T 12-10-2018 CLSA_c05720 a117f7e1072ae364a94e9cc001d1734a 238 Gene3D G3DSA:3.30.420.40 3 219 6.7E-53 T 12-10-2018 CLSA_c05720 a117f7e1072ae364a94e9cc001d1734a 238 SUPERFAMILY SSF53067 1 102 8.63E-26 T 12-10-2018 CLSA_c38390 e3ea5fbcb9673d35c2e5bb13fd5f91de 230 SUPERFAMILY SSF53639 1 221 1.04E-69 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c38390 e3ea5fbcb9673d35c2e5bb13fd5f91de 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 3.5E-50 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c38390 e3ea5fbcb9673d35c2e5bb13fd5f91de 230 Gene3D G3DSA:3.40.225.10 1 229 6.2E-62 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c38390 e3ea5fbcb9673d35c2e5bb13fd5f91de 230 SMART SM01007 7 195 1.7E-69 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c11120 031839e5cbc036bc6228f88d0021270d 108 Pfam PF00589 Phage integrase family 33 86 2.5E-13 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c11120 031839e5cbc036bc6228f88d0021270d 108 SUPERFAMILY SSF56349 10 96 1.47E-18 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c11120 031839e5cbc036bc6228f88d0021270d 108 Gene3D G3DSA:1.10.443.10 7 101 1.8E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 8 355 3.2E-90 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 SUPERFAMILY SSF52402 195 462 4.19E-59 T 12-10-2018 CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 Gene3D G3DSA:3.60.20.10 3 186 7.6E-51 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 Pfam PF13537 Glutamine amidotransferase domain 45 161 6.7E-31 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 SUPERFAMILY SSF56235 1 178 7.63E-44 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 Pfam PF00733 Asparagine synthase 207 349 4.9E-42 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 Gene3D G3DSA:3.40.50.620 195 498 6.3E-85 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 PIRSF PIRSF001589 342 506 2.2E-19 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c18850 c2794768921bf2f69a17a65f0bb05dc2 529 PIRSF PIRSF001589 1 347 1.0E-74 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c36500 d3bad9148bf1e27f448fc7050105f7bc 250 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 168 249 3.7E-30 T 12-10-2018 IPR026834 LHH CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 262 1.6E-56 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 SUPERFAMILY SSF56784 1 267 5.68E-67 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 Gene3D G3DSA:3.40.50.1000 7 262 9.0E-70 T 12-10-2018 IPR023214 HAD superfamily CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 235 4.0E-32 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 262 2.8E-64 T 12-10-2018 CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 Gene3D G3DSA:3.30.1240.10 85 191 9.0E-70 T 12-10-2018 CLSA_c42520 35ddd1b287f83ac4beb5b7ea588de17a 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 12-10-2018 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 SUPERFAMILY SSF55174 330 402 2.32E-10 T 12-10-2018 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 57 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 Gene3D G3DSA:3.40.50.620 5 222 2.4E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 Pfam PF00579 tRNA synthetases class I (W and Y) 36 321 1.1E-73 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 Gene3D G3DSA:1.10.240.10 223 331 3.6E-32 T 12-10-2018 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 403 43.813 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 14 401 3.0E-113 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 SUPERFAMILY SSF52374 6 316 1.01E-88 T 12-10-2018 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 Gene3D G3DSA:3.10.290.10 332 402 7.4E-14 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 7.6E-23 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 7.6E-23 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 51 73 7.6E-23 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c15050 35dae25391f901cdedbae737cf53bf53 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 7.6E-23 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 Gene3D G3DSA:3.40.1160.10 1 247 3.8E-79 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 Pfam PF13840 ACT domain 333 394 1.1E-20 T 12-10-2018 IPR027795 CASTOR, ACT domain CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 SUPERFAMILY SSF55021 331 398 1.17E-14 T 12-10-2018 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 SUPERFAMILY SSF53633 2 246 2.49E-70 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 Gene3D G3DSA:3.30.2130.10 250 399 1.5E-28 T 12-10-2018 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 PIRSF PIRSF000726 63 399 2.8E-83 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 PIRSF PIRSF000726 1 71 5.7E-9 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 Pfam PF00696 Amino acid kinase family 2 235 1.2E-48 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CLSA_c14500 a9aa2cef44bf7752e0d2f341e86b25a6 399 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 68 397 3.3E-91 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c12050 aa269d5d6ba691873f2ba8206334bf2a 298 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 236 290 9.2E-21 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 CLSA_c12050 aa269d5d6ba691873f2ba8206334bf2a 298 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 25 230 1.3E-53 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c12050 aa269d5d6ba691873f2ba8206334bf2a 298 Gene3D G3DSA:3.30.70.120 209 283 5.7E-22 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c12050 aa269d5d6ba691873f2ba8206334bf2a 298 PIRSF PIRSF006483 6 297 7.1E-74 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c17580 21ac94d2d58149506c931b50bd0b4f24 241 SMART SM00382 26 221 2.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c17580 21ac94d2d58149506c931b50bd0b4f24 241 SUPERFAMILY SSF52540 2 234 1.52E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17580 21ac94d2d58149506c931b50bd0b4f24 241 Pfam PF00005 ABC transporter 17 169 8.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17580 21ac94d2d58149506c931b50bd0b4f24 241 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c17580 21ac94d2d58149506c931b50bd0b4f24 241 Gene3D G3DSA:3.40.50.300 1 240 3.2E-63 T 12-10-2018 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 SMART SM00342 184 266 1.7E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 Pfam PF12833 Helix-turn-helix domain 191 266 1.5E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 SUPERFAMILY SSF46689 170 218 1.26E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 SUPERFAMILY SSF51215 19 153 1.96E-24 T 12-10-2018 IPR037923 Transcription regulator HTH-like CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 2.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 2.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 Gene3D G3DSA:1.10.10.60 164 217 1.6E-11 T 12-10-2018 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 Pfam PF02311 AraC-like ligand binding domain 25 134 7.2E-20 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 Gene3D G3DSA:2.60.120.10 4 88 2.0E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 Gene3D G3DSA:1.10.10.60 218 269 2.7E-14 T 12-10-2018 CLSA_c20300 df8d99333ef892f92d20018d0a25d799 279 SUPERFAMILY SSF46689 220 267 7.62E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c29920 d4d79b36957c3e94186f73a04c366859 343 Pfam PF03864 Phage major capsid protein E 8 329 6.7E-40 T 12-10-2018 IPR005564 Major capsid protein GpE CLSA_c29920 d4d79b36957c3e94186f73a04c366859 343 Gene3D G3DSA:3.90.1690.10 99 287 6.7E-8 T 12-10-2018 CLSA_c06460 8b77ae040a57d9e4a4cf6beb2214e0df 189 SMART SM00471 15 143 2.6E-9 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c06460 8b77ae040a57d9e4a4cf6beb2214e0df 189 SUPERFAMILY SSF109604 4 185 2.06E-34 T 12-10-2018 CLSA_c06460 8b77ae040a57d9e4a4cf6beb2214e0df 189 Pfam PF01966 HD domain 19 131 1.5E-11 T 12-10-2018 IPR006674 HD domain CLSA_c06460 8b77ae040a57d9e4a4cf6beb2214e0df 189 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 11 183 3.0E-46 T 12-10-2018 IPR005249 Conserved hypothetical protein CHP00488 CLSA_c06460 8b77ae040a57d9e4a4cf6beb2214e0df 189 Gene3D G3DSA:1.10.3210.10 1 188 3.6E-58 T 12-10-2018 CLSA_c40460 4f11731c2d87a1febc34be7cb28110aa 278 Gene3D G3DSA:3.30.1180.10 153 277 4.5E-28 T 12-10-2018 CLSA_c40460 4f11731c2d87a1febc34be7cb28110aa 278 Gene3D G3DSA:3.40.50.10170 1 152 9.9E-51 T 12-10-2018 CLSA_c40460 4f11731c2d87a1febc34be7cb28110aa 278 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 277 1.0E-82 T 12-10-2018 IPR003797 DegV CLSA_c40460 4f11731c2d87a1febc34be7cb28110aa 278 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 275 1.2E-86 T 12-10-2018 IPR003797 DegV CLSA_c40460 4f11731c2d87a1febc34be7cb28110aa 278 SUPERFAMILY SSF82549 3 278 1.88E-78 T 12-10-2018 CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 Gene3D G3DSA:3.40.50.1100 50 146 9.3E-117 T 12-10-2018 CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 Gene3D G3DSA:3.30.70.260 323 393 4.1E-5 T 12-10-2018 CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 301 3.3E-77 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 SUPERFAMILY SSF55021 325 391 1.95E-6 T 12-10-2018 CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 396 3.7E-134 T 12-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 SUPERFAMILY SSF53686 4 308 8.91E-98 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CLSA_c28180 eae0603d43407c05cd0a1285e1b0baef 406 Gene3D G3DSA:3.40.50.1100 8 306 9.3E-117 T 12-10-2018 CLSA_c22480 063cd61a1ef1c8cfd94ac142b517400e 81 SUPERFAMILY SSF50182 8 70 2.24E-22 T 12-10-2018 IPR010920 LSM domain superfamily CLSA_c22480 063cd61a1ef1c8cfd94ac142b517400e 81 Gene3D G3DSA:2.30.30.100 1 72 5.5E-29 T 12-10-2018 CLSA_c22480 063cd61a1ef1c8cfd94ac142b517400e 81 Pfam PF17209 Hfq protein 9 71 6.4E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLSA_c22480 063cd61a1ef1c8cfd94ac142b517400e 81 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 67 27.867 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLSA_c22480 063cd61a1ef1c8cfd94ac142b517400e 81 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 67 9.9E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 Gene3D G3DSA:3.40.50.150 150 387 1.8E-34 T 12-10-2018 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.0E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 SMART SM00422 1 70 1.4E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 SUPERFAMILY SSF46955 2 97 9.52E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 SUPERFAMILY SSF53335 147 375 2.59E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 Pfam PF08241 Methyltransferase domain 173 271 3.2E-22 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c15120 171737675964b9ac7fbe4f87514b737d 388 Gene3D G3DSA:1.10.1660.10 1 137 2.4E-32 T 12-10-2018 CLSA_c41550 f290ae64d4984a10344ac4df687466ac 286 Gene3D G3DSA:1.10.10.10 25 100 7.3E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c41550 f290ae64d4984a10344ac4df687466ac 286 Pfam PF01418 Helix-turn-helix domain, rpiR family 24 94 1.1E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c41550 f290ae64d4984a10344ac4df687466ac 286 Gene3D G3DSA:3.40.50.10490 105 284 1.4E-26 T 12-10-2018 CLSA_c41550 f290ae64d4984a10344ac4df687466ac 286 Pfam PF01380 SIS domain 134 237 2.7E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c41550 f290ae64d4984a10344ac4df687466ac 286 SUPERFAMILY SSF46689 24 97 1.25E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c41550 f290ae64d4984a10344ac4df687466ac 286 SUPERFAMILY SSF53697 107 270 2.83E-23 T 12-10-2018 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.076 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 SUPERFAMILY SSF51735 3 160 2.16E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 4.6E-90 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 SUPERFAMILY SSF48179 161 266 5.61E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 PIRSF PIRSF000193 2 266 1.1E-90 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 3.8E-39 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 5.0E-23 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 Gene3D G3DSA:3.40.50.720 1 164 4.3E-55 T 12-10-2018 CLSA_c45260 08d54dd59fa1ed00f9b50d87fe259b77 266 Gene3D G3DSA:1.10.3730.10 165 266 3.7E-39 T 12-10-2018 CLSA_c02600 578186eb9a03f06bae5d250c843b6222 269 Pfam PF00809 Pterin binding enzyme 17 251 4.1E-86 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c02600 578186eb9a03f06bae5d250c843b6222 269 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 265 4.4E-101 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CLSA_c02600 578186eb9a03f06bae5d250c843b6222 269 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 16 31 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c02600 578186eb9a03f06bae5d250c843b6222 269 SUPERFAMILY SSF51717 3 268 2.62E-103 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c02600 578186eb9a03f06bae5d250c843b6222 269 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 50 63 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c02600 578186eb9a03f06bae5d250c843b6222 269 Gene3D G3DSA:3.20.20.20 1 269 2.0E-114 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 Pfam PF01336 OB-fold nucleic acid binding domain 63 139 4.2E-15 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 501 43.873 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 SUPERFAMILY SSF55681 156 498 2.11E-118 T 12-10-2018 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 4.5E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 4.5E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 4.5E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 4.5E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 4.5E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 501 4.2E-204 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 PIRSF PIRSF039101 1 501 9.9E-194 T 12-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 Gene3D G3DSA:2.40.50.140 15 149 3.8E-40 T 12-10-2018 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 158 497 1.1E-82 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 Gene3D G3DSA:3.30.930.10 152 501 4.8E-135 T 12-10-2018 CLSA_c01430 871d7d2ea4107e9eeb618edb5634dd52 501 SUPERFAMILY SSF50249 14 149 2.14E-37 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c16820 f138c990fd76ed6678c78d73e0a483dc 94 SUPERFAMILY SSF54862 16 72 7.39E-17 T 12-10-2018 CLSA_c16820 f138c990fd76ed6678c78d73e0a483dc 94 Gene3D G3DSA:3.30.70.20 43 72 2.2E-5 T 12-10-2018 CLSA_c16820 f138c990fd76ed6678c78d73e0a483dc 94 Pfam PF13187 4Fe-4S dicluster domain 24 65 6.9E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c16820 f138c990fd76ed6678c78d73e0a483dc 94 Gene3D G3DSA:3.30.70.20 3 42 3.2E-5 T 12-10-2018 CLSA_c16820 f138c990fd76ed6678c78d73e0a483dc 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 SUPERFAMILY SSF46785 1 83 1.96E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 Gene3D G3DSA:1.10.10.10 1 92 1.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 Pfam PF03466 LysR substrate binding domain 119 297 7.9E-8 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 Gene3D G3DSA:3.40.190.10 119 290 1.8E-9 T 12-10-2018 CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 Gene3D G3DSA:3.40.190.10 169 271 1.8E-9 T 12-10-2018 CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 SUPERFAMILY SSF53850 91 296 1.56E-20 T 12-10-2018 CLSA_c32740 84ad1038416fb8a139bb041e3bebf403 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 29 285 1.9E-93 T 12-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 Pfam PF02065 Melibiase 290 635 2.9E-164 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 ProSitePatterns PS00512 Alpha-galactosidase signature. 359 374 - T 12-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 292 312 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 466 481 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 545 561 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 408 430 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 520 536 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 330 344 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 241 256 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PRINTS PR00743 Glycosyl hydrolase family 36 signature 358 373 1.7E-62 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 Gene3D G3DSA:2.60.40.1180 633 728 3.3E-28 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 PIRSF PIRSF005536 1 728 6.9E-300 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 Gene3D G3DSA:2.70.98.60 1 309 6.2E-118 T 12-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 Gene3D G3DSA:3.20.20.70 310 632 8.0E-133 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 649 725 7.0E-20 T 12-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CLSA_c08670 002a677032c975478b0affe3a349b5a6 728 SUPERFAMILY SSF51445 325 664 2.02E-108 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 Gene3D G3DSA:3.40.50.300 1 280 7.1E-46 T 12-10-2018 CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 Pfam PF00005 ABC transporter 17 184 1.4E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 SMART SM00382 354 517 2.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 SMART SM00382 26 231 0.0012 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 SUPERFAMILY SSF52540 2 234 1.07E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 Gene3D G3DSA:3.40.50.300 302 552 3.7E-43 T 12-10-2018 CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 Pfam PF00005 ABC transporter 345 472 1.6E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c19170 9e0da5b97b47b6bf15779a581ca53337 579 SUPERFAMILY SSF52540 324 519 5.33E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c35720 af4753b198d092fcf2983dd5eb7027b5 68 Gene3D G3DSA:1.10.260.40 4 68 6.8E-12 T 12-10-2018 CLSA_c35720 af4753b198d092fcf2983dd5eb7027b5 68 Pfam PF13560 Helix-turn-helix domain 7 59 5.4E-9 T 12-10-2018 CLSA_c35720 af4753b198d092fcf2983dd5eb7027b5 68 SUPERFAMILY SSF47413 6 63 7.88E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c35720 af4753b198d092fcf2983dd5eb7027b5 68 SMART SM00530 5 60 4.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c24540 43f2db94008bce26f57c89a29bebd337 254 Gene3D G3DSA:1.10.3720.10 49 247 1.6E-23 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c24540 43f2db94008bce26f57c89a29bebd337 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 251 8.6E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c24540 43f2db94008bce26f57c89a29bebd337 254 SUPERFAMILY SSF161098 54 234 5.89E-28 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 3.1E-82 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 Gene3D G3DSA:3.20.20.70 1 214 1.3E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 SUPERFAMILY SSF51366 1 213 1.88E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 9.8E-90 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CLSA_c13740 9f577bb428677c51011abb82498e9e90 214 PIRSF PIRSF001461 1 214 1.5E-92 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CLSA_c12020 5f58cfa85b3f4b769536ba8f76559797 285 SUPERFAMILY SSF161098 87 268 4.45E-27 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c12020 5f58cfa85b3f4b769536ba8f76559797 285 Gene3D G3DSA:1.10.3720.10 87 283 4.9E-21 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c12020 5f58cfa85b3f4b769536ba8f76559797 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 279 6.7E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c40060 db3c132667a905b0a4fb333662587271 183 Pfam PF02659 Putative manganese efflux pump 32 181 4.2E-30 T 12-10-2018 IPR003810 Putative manganese efflux pump CLSA_c42930 c9e614ddec49c7d6ebff681d694c7937 94 SUPERFAMILY SSF54909 1 94 1.57E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c42930 c9e614ddec49c7d6ebff681d694c7937 94 Pfam PF07876 Stress responsive A/B Barrel Domain 3 94 9.8E-18 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel CLSA_c42930 c9e614ddec49c7d6ebff681d694c7937 94 SMART SM00886 2 94 2.8E-18 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel CLSA_c42930 c9e614ddec49c7d6ebff681d694c7937 94 Gene3D G3DSA:3.30.70.100 1 94 3.6E-19 T 12-10-2018 CLSA_c31430 17970aab599b7b182044f6534f6e0fba 264 SMART SM00954 67 209 4.6E-26 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 CLSA_c31430 17970aab599b7b182044f6534f6e0fba 264 SUPERFAMILY SSF81301 30 235 6.21E-33 T 12-10-2018 CLSA_c31430 17970aab599b7b182044f6534f6e0fba 264 Gene3D G3DSA:3.30.460.10 22 190 5.2E-16 T 12-10-2018 CLSA_c31430 17970aab599b7b182044f6534f6e0fba 264 Pfam PF04607 Region found in RelA / SpoT proteins 67 207 3.9E-29 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 CLSA_c01770 2715bcadc5350762148c8e75a8714c59 369 Gene3D G3DSA:3.40.50.1010 170 304 1.0E-55 T 12-10-2018 CLSA_c01770 2715bcadc5350762148c8e75a8714c59 369 SMART SM00670 173 280 1.3E-12 T 12-10-2018 IPR002716 PIN domain CLSA_c01770 2715bcadc5350762148c8e75a8714c59 369 Pfam PF13638 PIN domain 176 290 5.8E-5 T 12-10-2018 IPR002716 PIN domain CLSA_c01770 2715bcadc5350762148c8e75a8714c59 369 SUPERFAMILY SSF88723 175 301 1.11E-24 T 12-10-2018 IPR029060 PIN-like domain superfamily CLSA_c02670 260456739152184912eb126d85100360 169 Gene3D G3DSA:3.30.70.1150 84 164 3.4E-31 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CLSA_c02670 260456739152184912eb126d85100360 169 Pfam PF10369 Small subunit of acetolactate synthase 85 158 3.0E-29 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLSA_c02670 260456739152184912eb126d85100360 169 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 74 1.0E-22 T 12-10-2018 CLSA_c02670 260456739152184912eb126d85100360 169 SUPERFAMILY SSF55021 3 75 1.99E-22 T 12-10-2018 CLSA_c02670 260456739152184912eb126d85100360 169 SUPERFAMILY SSF55021 81 162 1.95E-27 T 12-10-2018 CLSA_c02670 260456739152184912eb126d85100360 169 Gene3D G3DSA:3.30.70.260 1 79 7.8E-34 T 12-10-2018 CLSA_c02670 260456739152184912eb126d85100360 169 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 159 3.8E-63 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLSA_c02670 260456739152184912eb126d85100360 169 Pfam PF01842 ACT domain 4 69 7.6E-17 T 12-10-2018 IPR002912 ACT domain CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 Gene3D G3DSA:2.80.10.50 122 175 4.5E-14 T 12-10-2018 CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 SUPERFAMILY SSF50370 33 172 4.72E-35 T 12-10-2018 IPR035992 Ricin B-like lectins CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 Gene3D G3DSA:2.80.10.50 23 75 2.0E-10 T 12-10-2018 CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 35 112 5.0E-16 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 119 174 1.6E-11 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 Gene3D G3DSA:2.80.10.50 76 121 3.2E-9 T 12-10-2018 CLSA_c18490 0486e5203e4d2a53f18d2a204598a6f7 175 SMART SM00458 35 172 6.1E-11 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 Pfam PF02811 PHP domain 26 197 7.3E-55 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 24 1086 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 Pfam PF14579 Helix-hairpin-helix motif 843 931 3.8E-28 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 Gene3D G3DSA:1.10.10.1600 470 546 3.8E-28 T 12-10-2018 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 Gene3D G3DSA:1.10.150.870 829 920 1.8E-7 T 12-10-2018 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 Gene3D G3DSA:3.20.20.140 10 293 2.9E-116 T 12-10-2018 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 SUPERFAMILY SSF89550 24 287 7.46E-46 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 315 759 1.9E-175 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c42920 0fe543fc6f49d83f3d256c8b87b4aed4 1209 SMART SM00481 25 92 1.2E-33 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLSA_c27870 26ca9782454eb122e98ba85f0889a1c1 212 Gene3D G3DSA:1.10.10.10 108 149 1.3E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c27870 26ca9782454eb122e98ba85f0889a1c1 212 Gene3D G3DSA:1.10.10.2800 1 107 4.8E-27 T 12-10-2018 CLSA_c27870 26ca9782454eb122e98ba85f0889a1c1 212 Pfam PF02631 RecX family 84 204 4.0E-24 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CLSA_c27870 26ca9782454eb122e98ba85f0889a1c1 212 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 15.686 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 SUPERFAMILY SSF69360 25 127 2.22E-23 T 12-10-2018 CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 Gene3D G3DSA:2.10.270.10 22 105 7.9E-22 T 12-10-2018 CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 SUPERFAMILY SSF69304 280 421 8.5E-9 T 12-10-2018 CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 Pfam PF01473 Putative cell wall binding repeat 68 86 6.5E-8 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 Pfam PF01473 Putative cell wall binding repeat 49 66 4.1E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 Pfam PF16472 Domain of unknown function (DUF5050) 181 269 2.2E-10 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 Pfam PF16472 Domain of unknown function (DUF5050) 274 356 1.4E-18 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 CLSA_c34570 c7cc7a0cc6618290289da759be2873cf 425 Pfam PF16472 Domain of unknown function (DUF5050) 369 422 5.7E-9 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 CLSA_c24700 792e7c35bb8573783e0e3899bcb263a9 312 PIRSF PIRSF037505 3 229 5.1E-8 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CLSA_c24700 792e7c35bb8573783e0e3899bcb263a9 312 PIRSF PIRSF037505 272 310 0.11 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CLSA_c24700 792e7c35bb8573783e0e3899bcb263a9 312 SUPERFAMILY SSF82282 10 311 2.88E-89 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c24700 792e7c35bb8573783e0e3899bcb263a9 312 Gene3D G3DSA:3.20.20.330 1 308 5.4E-115 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c24700 792e7c35bb8573783e0e3899bcb263a9 312 Pfam PF02574 Homocysteine S-methyltransferase 14 307 1.4E-86 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 SUPERFAMILY SSF52317 1 190 1.07E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00097 Anthranilate synthase component II signature 73 84 1.9E-33 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00097 Anthranilate synthase component II signature 118 130 1.9E-33 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00097 Anthranilate synthase component II signature 46 55 1.9E-33 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00097 Anthranilate synthase component II signature 98 106 1.9E-33 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.9E-33 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.9E-33 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 73 84 9.7E-14 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 9.7E-14 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 46 55 9.7E-14 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 Pfam PF00117 Glutamine amidotransferase class-I 3 187 5.4E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 185 9.4E-69 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 Gene3D G3DSA:3.40.50.880 1 186 3.5E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 43 57 8.0E-9 T 12-10-2018 CLSA_c23610 01632e287c7ccf27de7f6292c1b9ca08 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 73 89 8.0E-9 T 12-10-2018 CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 Pfam PF10635 DisA bacterial checkpoint controller linker region 141 274 1.6E-52 T 12-10-2018 IPR018906 DNA integrity scanning, DisA, linker region CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 24 135 5.7E-28 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 SUPERFAMILY SSF143597 18 141 8.37E-33 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 Gene3D G3DSA:1.20.1260.110 142 286 3.1E-44 T 12-10-2018 IPR038331 DisA, linker domain superfamily CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 Gene3D G3DSA:1.10.150.20 287 351 1.8E-25 T 12-10-2018 CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 SUPERFAMILY SSF47781 257 342 6.67E-11 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 1 351 43.827 T 12-10-2018 IPR023763 DNA integrity scanning protein, DisA CLSA_c01750 3edec195a8b089c5452b2c3fcb4a2d91 354 Gene3D G3DSA:3.40.1700.10 7 141 3.7E-55 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CLSA_c32430 4fcaa0dbce7ddc8089956c3fd9ff6649 391 Pfam PF11760 Cobalamin synthesis G N-terminal 93 172 5.4E-30 T 12-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CLSA_c32430 4fcaa0dbce7ddc8089956c3fd9ff6649 391 Pfam PF01890 Cobalamin synthesis G C-terminus 269 384 5.8E-30 T 12-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLSA_c32430 4fcaa0dbce7ddc8089956c3fd9ff6649 391 SUPERFAMILY SSF159672 12 276 2.09E-49 T 12-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CLSA_c32430 4fcaa0dbce7ddc8089956c3fd9ff6649 391 Gene3D G3DSA:3.30.420.180 259 389 1.1E-29 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 CLSA_c32430 4fcaa0dbce7ddc8089956c3fd9ff6649 391 Gene3D G3DSA:3.40.50.11220 45 167 1.9E-28 T 12-10-2018 CLSA_c32430 4fcaa0dbce7ddc8089956c3fd9ff6649 391 SUPERFAMILY SSF159664 262 386 1.29E-32 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 Gene3D G3DSA:3.20.20.140 50 346 7.2E-137 T 12-10-2018 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 373 5.2E-104 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 Pfam PF01979 Amidohydrolase family 46 374 1.3E-30 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 PIRSF PIRSF038994 1 376 1.2E-124 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 Gene3D G3DSA:2.30.40.10 13 373 7.2E-137 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 SUPERFAMILY SSF51338 1 363 1.66E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c09610 2628724a44a06117c7b1f3d2ee7e6871 376 SUPERFAMILY SSF51556 50 346 1.25E-93 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c01590 d7d3b27e77ed413004f581842b3e6d27 386 SUPERFAMILY SSF53187 3 372 1.26E-43 T 12-10-2018 CLSA_c01590 d7d3b27e77ed413004f581842b3e6d27 386 Gene3D G3DSA:3.40.630.10 19 353 8.2E-79 T 12-10-2018 CLSA_c01590 d7d3b27e77ed413004f581842b3e6d27 386 PIRSF PIRSF037226 1 386 2.7E-84 T 12-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted CLSA_c01590 d7d3b27e77ed413004f581842b3e6d27 386 Gene3D G3DSA:3.30.70.360 162 278 8.2E-79 T 12-10-2018 CLSA_c44140 4d440e47fc5d8909ad1ec7aa60caf8ad 115 Gene3D G3DSA:1.10.10.10 1 115 3.5E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c44140 4d440e47fc5d8909ad1ec7aa60caf8ad 115 SUPERFAMILY SSF46785 11 109 3.43E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c44140 4d440e47fc5d8909ad1ec7aa60caf8ad 115 Pfam PF01638 HxlR-like helix-turn-helix 21 108 5.3E-31 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type CLSA_c09850 563db451aa59bbe0e522eec07d770581 115 Gene3D G3DSA:1.20.58.80 3 104 6.3E-37 T 12-10-2018 CLSA_c09850 563db451aa59bbe0e522eec07d770581 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 11 103 2.1E-34 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c09850 563db451aa59bbe0e522eec07d770581 115 SUPERFAMILY SSF46973 3 103 1.23E-34 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 CLSA_c09850 563db451aa59bbe0e522eec07d770581 115 PIRSF PIRSF000699 1 110 1.6E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c23290 7c436f6575b48a4112240877de76b7cd 141 Gene3D G3DSA:2.30.30.40 11 133 1.9E-35 T 12-10-2018 CLSA_c23290 7c436f6575b48a4112240877de76b7cd 141 Pfam PF01584 CheW-like domain 8 139 2.9E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c23290 7c436f6575b48a4112240877de76b7cd 141 SUPERFAMILY SSF50341 5 139 1.09E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c23290 7c436f6575b48a4112240877de76b7cd 141 SMART SM00260 4 139 6.6E-28 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c23290 7c436f6575b48a4112240877de76b7cd 141 Gene3D G3DSA:2.40.50.180 27 134 1.9E-35 T 12-10-2018 CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 505 4.2E-41 T 12-10-2018 IPR000160 GGDEF domain CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 502 8.8E-43 T 12-10-2018 IPR000160 GGDEF domain CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 Gene3D G3DSA:3.30.70.270 341 519 4.5E-54 T 12-10-2018 CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 Gene3D G3DSA:3.20.20.450 520 769 4.6E-85 T 12-10-2018 IPR035919 EAL domain superfamily CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 Pfam PF00563 EAL domain 530 757 9.4E-66 T 12-10-2018 IPR001633 EAL domain CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 SMART SM00052 516 762 5.0E-97 T 12-10-2018 IPR001633 EAL domain CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 SMART SM00267 335 506 5.9E-51 T 12-10-2018 IPR000160 GGDEF domain CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 SUPERFAMILY SSF141868 524 767 7.98E-79 T 12-10-2018 IPR035919 EAL domain superfamily CLSA_c37020 64363efaed0d5403c3d2cc1f5292b462 776 SUPERFAMILY SSF55073 352 508 2.67E-45 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 SUPERFAMILY SSF51735 2 155 3.78E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 326 36.8 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 PIRSF PIRSF000148 1 330 8.6E-123 T 12-10-2018 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 3 328 8.0E-137 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 SMART SM00859 3 120 2.1E-44 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 119 1.6E-33 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 Gene3D G3DSA:3.40.50.720 4 323 3.3E-132 T 12-10-2018 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 SUPERFAMILY SSF55347 128 313 1.17E-70 T 12-10-2018 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 312 4.3E-49 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c27500 d00558b60ce39328906830b080b9f2ef 330 Gene3D G3DSA:3.30.360.10 127 309 3.3E-132 T 12-10-2018 CLSA_c09180 ac234cf170f9a14bec04603c2df35c38 257 Pfam PF03374 Phage antirepressor protein KilAC domain 145 252 1.8E-31 T 12-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 CLSA_c09180 ac234cf170f9a14bec04603c2df35c38 257 SMART SM01040 14 101 3.5E-30 T 12-10-2018 IPR003497 BRO N-terminal domain CLSA_c09180 ac234cf170f9a14bec04603c2df35c38 257 Pfam PF02498 BRO family, N-terminal domain 15 101 5.6E-21 T 12-10-2018 IPR003497 BRO N-terminal domain CLSA_c04480 fd3399f9c8b1304bd2aa99e3c316d54d 721 Gene3D G3DSA:3.40.50.300 91 329 1.5E-29 T 12-10-2018 CLSA_c04480 fd3399f9c8b1304bd2aa99e3c316d54d 721 SUPERFAMILY SSF52540 122 335 1.58E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c04480 fd3399f9c8b1304bd2aa99e3c316d54d 721 Pfam PF13614 AAA domain 125 310 1.1E-14 T 12-10-2018 IPR025669 AAA domain CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 SMART SM00387 382 494 2.6E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 Gene3D G3DSA:3.30.565.10 342 494 7.4E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 Gene3D G3DSA:1.20.1480.50 158 255 7.4E-13 T 12-10-2018 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 SUPERFAMILY SSF158472 197 245 9.94E-10 T 12-10-2018 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 SUPERFAMILY SSF47384 257 337 9.81E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 Gene3D G3DSA:1.10.287.130 263 336 1.7E-22 T 12-10-2018 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 SMART SM00304 196 248 2.2E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 SUPERFAMILY SSF55874 326 490 2.75E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 SMART SM00388 270 336 3.1E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 336 6.4E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 7.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 7.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 7.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 491 2.0E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c27900 5711b53dc5c0f6e9e85b1b506f245152 502 Pfam PF00672 HAMP domain 198 244 3.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 SUPERFAMILY SSF50129 1 182 5.02E-57 T 12-10-2018 IPR011032 GroES-like superfamily CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 1.2E-35 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 Pfam PF00107 Zinc-binding dehydrogenase 183 309 3.6E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 SUPERFAMILY SSF51735 147 315 1.53E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 SMART SM00829 10 350 2.5E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 Gene3D G3DSA:3.40.50.720 160 296 6.0E-107 T 12-10-2018 CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLSA_c40760 011dfa6a0ad4e063fd442d4bacd6d663 357 Gene3D G3DSA:3.90.180.10 9 331 6.0E-107 T 12-10-2018 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 PIRSF PIRSF000521 27 420 3.5E-40 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 Pfam PF00202 Aminotransferase class-III 20 437 1.7E-134 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 445 50.112 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 442 1.3E-175 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 Gene3D G3DSA:3.40.640.10 62 339 9.7E-163 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 SUPERFAMILY SSF53383 7 444 4.87E-133 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c16190 df734626845c4cb59624b8d15cbe4c1a 453 Gene3D G3DSA:3.90.1150.10 8 438 9.7E-163 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1182 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 SUPERFAMILY SSF52540 1 1168 1.07E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 SUPERFAMILY SSF75553 485 690 3.01E-48 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1184 22.645 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Gene3D G3DSA:3.40.50.300 1 238 1.1E-57 T 12-10-2018 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Gene3D G3DSA:3.30.70.1620 585 671 1.8E-58 T 12-10-2018 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 PIRSF PIRSF005719 1 1185 2.1E-294 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Gene3D G3DSA:3.40.50.300 1031 1185 6.7E-48 T 12-10-2018 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Gene3D G3DSA:1.20.1060.20 498 684 1.8E-58 T 12-10-2018 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 SMART SM00968 525 642 1.9E-32 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Pfam PF02463 RecF/RecN/SMC N terminal domain 773 1175 4.0E-23 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 705 1037 3.0E-5 T 12-10-2018 CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 240 6.9E-36 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CLSA_c13930 fe49e8d8fad99876a641aeb2f3773398 1185 Pfam PF06470 SMC proteins Flexible Hinge Domain 530 642 3.7E-25 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 SUPERFAMILY SSF50494 101 310 4.52E-58 T 12-10-2018 IPR009003 Peptidase S1, PA clan CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 PRINTS PR00834 HtrA/DegQ protease family signature 166 186 7.8E-30 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 PRINTS PR00834 HtrA/DegQ protease family signature 145 157 7.8E-30 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 PRINTS PR00834 HtrA/DegQ protease family signature 268 285 7.8E-30 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 PRINTS PR00834 HtrA/DegQ protease family signature 208 232 7.8E-30 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 PRINTS PR00834 HtrA/DegQ protease family signature 353 365 7.8E-30 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 7.8E-30 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 SMART SM00228 315 395 2.1E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 Gene3D G3DSA:2.30.42.10 315 408 2.9E-23 T 12-10-2018 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 Pfam PF13365 Trypsin-like peptidase domain 136 275 1.6E-34 T 12-10-2018 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 Pfam PF13180 PDZ domain 317 403 4.3E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 Gene3D G3DSA:2.40.10.10 198 314 3.5E-35 T 12-10-2018 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 Gene3D G3DSA:2.40.10.10 84 197 2.9E-30 T 12-10-2018 CLSA_c04750 a4ea3c8630cb81cee21795278d120474 408 SUPERFAMILY SSF50156 294 405 2.1E-19 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 CLSA_c26230 c328c4f402ea7bc02a2137af5fee25b1 235 Pfam PF01553 Acyltransferase 57 181 3.8E-30 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CLSA_c26230 c328c4f402ea7bc02a2137af5fee25b1 235 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 54 181 3.4E-37 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CLSA_c26230 c328c4f402ea7bc02a2137af5fee25b1 235 SUPERFAMILY SSF69593 31 233 2.22E-49 T 12-10-2018 CLSA_c26230 c328c4f402ea7bc02a2137af5fee25b1 235 SMART SM00563 70 184 2.8E-36 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00097 Anthranilate synthase component II signature 240 251 1.2E-7 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00097 Anthranilate synthase component II signature 323 336 1.2E-7 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00097 Anthranilate synthase component II signature 213 222 1.2E-7 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 SUPERFAMILY SSF52317 142 348 9.87E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 Pfam PF00117 Glutamine amidotransferase class-I 173 346 1.1E-48 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 SMART SM01097 1 131 3.1E-89 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 Gene3D G3DSA:3.50.30.20 1 142 6.4E-58 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 1.4E-12 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00096 Glutamine amidotransferase superfamily signature 323 336 1.4E-12 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 1.4E-12 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 1.2E-53 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 SUPERFAMILY SSF52021 1 142 4.18E-57 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 Gene3D G3DSA:3.40.50.880 143 348 1.1E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 2.1E-35 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 2.1E-35 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 2.1E-35 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 2.1E-35 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 2.1E-35 T 12-10-2018 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 346 4.5E-145 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00430 964b9521706ce88340690cf0c7a43f51 349 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 349 47.563 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c02450 31737690f9523d35af9047a879be579e 449 SMART SM00387 339 448 5.4E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c02450 31737690f9523d35af9047a879be579e 449 Gene3D G3DSA:3.30.565.10 293 449 4.4E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c02450 31737690f9523d35af9047a879be579e 449 SUPERFAMILY SSF47384 216 294 6.47E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c02450 31737690f9523d35af9047a879be579e 449 SMART SM00388 227 293 2.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c02450 31737690f9523d35af9047a879be579e 449 SUPERFAMILY SSF55874 297 447 6.57E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c02450 31737690f9523d35af9047a879be579e 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 444 1.2E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c02450 31737690f9523d35af9047a879be579e 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 4.4E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c02450 31737690f9523d35af9047a879be579e 449 Gene3D G3DSA:1.10.287.130 220 292 1.9E-20 T 12-10-2018 CLSA_c02450 31737690f9523d35af9047a879be579e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 1.8E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c02450 31737690f9523d35af9047a879be579e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.8E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c34460 1d0f98e5ddb4134c030248d5025ad3e5 113 Gene3D G3DSA:3.10.310.10 1 101 2.2E-35 T 12-10-2018 CLSA_c34460 1d0f98e5ddb4134c030248d5025ad3e5 113 SUPERFAMILY SSF54506 2 113 4.32E-33 T 12-10-2018 CLSA_c34460 1d0f98e5ddb4134c030248d5025ad3e5 113 Pfam PF02567 Phenazine biosynthesis-like protein 2 109 1.3E-20 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 173 201 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 Gene3D G3DSA:2.160.10.10 4 99 8.1E-6 T 12-10-2018 CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 141 4.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 165 199 8.1E-10 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 SUPERFAMILY SSF51161 42 94 3.3E-5 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 SUPERFAMILY SSF51161 80 207 6.1E-30 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c28580 5e00f6830742a6dda3d5c6d59652c40a 219 Gene3D G3DSA:2.160.10.10 100 214 7.2E-32 T 12-10-2018 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 Pfam PF07690 Major Facilitator Superfamily 21 410 4.1E-60 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 Gene3D G3DSA:1.20.1720.10 16 252 7.4E-49 T 12-10-2018 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 SUPERFAMILY SSF103473 8 470 3.66E-75 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 424 7.9E-87 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 Gene3D G3DSA:1.20.1250.20 259 476 2.3E-29 T 12-10-2018 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 2.4E-9 T 12-10-2018 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 2.4E-9 T 12-10-2018 CLSA_c24240 fda538e8324c1767e294f5b7fcfdd7be 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 2.4E-9 T 12-10-2018 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 SUPERFAMILY SSF55874 272 443 2.88E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 SMART SM00387 329 441 1.9E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 281 4.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 SUPERFAMILY SSF47384 199 282 1.53E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 Pfam PF10114 Sensory domain found in PocR 17 179 2.3E-53 T 12-10-2018 IPR018771 PocR domain CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 Gene3D G3DSA:3.30.565.10 289 453 4.4E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 9.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 9.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 9.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 9.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 438 8.9E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 SMART SM00388 211 283 2.0E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c18520 b4d7dbf0705b6ca8558451ad614639b7 473 Gene3D G3DSA:1.10.287.130 202 287 5.4E-17 T 12-10-2018 CLSA_c20450 66fd399c89d2b69a44e50ef04847924e 123 SMART SM00448 5 117 2.3E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20450 66fd399c89d2b69a44e50ef04847924e 123 Pfam PF00072 Response regulator receiver domain 7 117 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20450 66fd399c89d2b69a44e50ef04847924e 123 SUPERFAMILY SSF52172 3 122 7.26E-35 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20450 66fd399c89d2b69a44e50ef04847924e 123 Gene3D G3DSA:3.40.50.2300 2 123 2.5E-36 T 12-10-2018 CLSA_c02320 54074327d713b06fb53e84b4325ecc6a 113 ProSitePatterns PS01167 Ribosomal protein L17 signature. 31 53 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02320 54074327d713b06fb53e84b4325ecc6a 113 SUPERFAMILY SSF64263 3 113 1.31E-44 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02320 54074327d713b06fb53e84b4325ecc6a 113 Gene3D G3DSA:3.90.1030.10 2 113 3.8E-47 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02320 54074327d713b06fb53e84b4325ecc6a 113 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 2 113 28.017 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02320 54074327d713b06fb53e84b4325ecc6a 113 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 113 1.9E-46 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02320 54074327d713b06fb53e84b4325ecc6a 113 Pfam PF01196 Ribosomal protein L17 17 113 5.2E-40 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 355 368 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 126 138 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 161 172 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 65 83 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 204 231 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 261 276 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 299 316 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 30 46 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 PRINTS PR00992 Alanine racemase signature 278 293 2.1E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 Pfam PF00842 Alanine racemase, C-terminal domain 245 372 1.2E-48 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 SMART SM01005 245 373 6.1E-70 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 SUPERFAMILY SSF51419 11 246 5.23E-67 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 Gene3D G3DSA:2.40.37.10 10 372 1.2E-138 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 TIGRFAM TIGR00492 alr: alanine racemase 8 372 4.0E-120 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 SUPERFAMILY SSF50621 240 373 6.28E-52 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 35 45 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 Pfam PF01168 Alanine racemase, N-terminal domain 11 231 5.9E-69 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 Gene3D G3DSA:3.20.20.10 13 226 1.2E-138 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c30890 80c1021a5e555cf93eda01dc2da45b11 380 Hamap MF_01201 Alanine racemase. 4 373 34.98 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 Pfam PF00912 Transglycosylase 82 264 1.8E-56 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 SUPERFAMILY SSF53955 68 280 2.25E-60 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 Gene3D G3DSA:3.40.710.10 342 678 4.3E-168 T 12-10-2018 CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 92 668 6.9E-155 T 12-10-2018 CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 Gene3D G3DSA:3.90.1310.20 75 581 4.3E-168 T 12-10-2018 CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 SUPERFAMILY SSF56601 254 727 3.69E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 Pfam PF00905 Penicillin binding protein transpeptidase domain 378 640 6.3E-25 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLSA_c11370 431ee628a0a4ba1a709609f2b64cc59b 845 Gene3D G3DSA:1.10.3810.10 91 293 4.3E-168 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Gene3D G3DSA:3.40.50.20 1 93 3.6E-37 T 12-10-2018 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 SMART SM01210 327 416 7.8E-34 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 414 5.3E-25 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 2.5E-72 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 SUPERFAMILY SSF51246 326 415 2.67E-24 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Gene3D G3DSA:3.90.600.10 327 416 2.7E-27 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Gene3D G3DSA:3.30.1490.20 119 188 1.4E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 SMART SM01209 101 293 5.1E-114 T 12-10-2018 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 416 39.651 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Gene3D G3DSA:3.30.470.20 189 326 1.9E-49 T 12-10-2018 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.1E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 SUPERFAMILY SSF56059 102 323 7.07E-55 T 12-10-2018 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 415 1.3E-158 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13030 50a50c463f0e6b4cf57ec568dddaacdc 416 SUPERFAMILY SSF52440 1 101 6.91E-35 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c24680 93da02bc0cdbc9cb40684c7174d533e5 495 Gene3D G3DSA:1.20.1740.10 10 481 8.4E-60 T 12-10-2018 CLSA_c24680 93da02bc0cdbc9cb40684c7174d533e5 495 PIRSF PIRSF006060 1 485 9.7E-84 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c24680 93da02bc0cdbc9cb40684c7174d533e5 495 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CLSA_c24680 93da02bc0cdbc9cb40684c7174d533e5 495 Pfam PF00324 Amino acid permease 19 477 1.9E-138 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 Gene3D G3DSA:2.60.40.420 340 438 1.9E-32 T 12-10-2018 IPR008972 Cupredoxin CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 SUPERFAMILY SSF49503 351 436 5.2E-6 T 12-10-2018 IPR008972 Cupredoxin CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 111 308 1.6E-52 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 Pfam PF13473 Cupredoxin-like domain 345 434 4.2E-7 T 12-10-2018 IPR028096 EfeO-type cupredoxin-like domain CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 Pfam PF00403 Heavy-metal-associated domain 8 67 1.1E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 SUPERFAMILY SSF55008 6 69 1.07E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c23380 b1cdc36a83c60fd30923f44c04aa9ad1 608 Gene3D G3DSA:3.30.70.100 1 70 2.5E-18 T 12-10-2018 CLSA_c13470 7070cef22851b7606dda39083982de73 233 SUPERFAMILY SSF46894 131 230 1.59E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c13470 7070cef22851b7606dda39083982de73 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 3.6E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c13470 7070cef22851b7606dda39083982de73 233 SMART SM00448 4 117 1.5E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c13470 7070cef22851b7606dda39083982de73 233 SMART SM00862 153 229 1.7E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c13470 7070cef22851b7606dda39083982de73 233 SUPERFAMILY SSF52172 3 127 9.82E-42 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c13470 7070cef22851b7606dda39083982de73 233 Gene3D G3DSA:3.40.50.2300 2 130 4.8E-39 T 12-10-2018 CLSA_c13470 7070cef22851b7606dda39083982de73 233 Pfam PF00072 Response regulator receiver domain 6 117 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c13470 7070cef22851b7606dda39083982de73 233 Gene3D G3DSA:1.10.10.10 131 230 2.2E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 600 7.3E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 Gene3D G3DSA:1.20.1480.50 270 362 9.4E-12 T 12-10-2018 CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 SUPERFAMILY SSF58104 334 663 9.02E-62 T 12-10-2018 CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 SMART SM00283 388 663 1.0E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 Gene3D G3DSA:3.30.450.20 138 269 3.9E-28 T 12-10-2018 CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 SUPERFAMILY SSF103190 92 166 1.71E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 Pfam PF02743 Cache domain 45 267 1.9E-25 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c37290 f2445f383bb7cc66017cb3147d8bbb64 665 Gene3D G3DSA:1.10.287.950 363 663 9.5E-63 T 12-10-2018 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 Hamap MF_01987 Ribokinase [rbsK]. 2 305 26.21 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.0E-68 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 PRINTS PR00990 Ribokinase signature 173 188 1.7E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 PRINTS PR00990 Ribokinase signature 217 228 1.7E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 PRINTS PR00990 Ribokinase signature 33 52 1.7E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 PRINTS PR00990 Ribokinase signature 6 27 1.7E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 PRINTS PR00990 Ribokinase signature 105 118 1.7E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 SUPERFAMILY SSF53613 1 306 2.81E-79 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 302 1.7E-111 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLSA_c15870 0ba162120f928a4d92399a28edbf09ac 313 Gene3D G3DSA:3.40.1190.20 1 304 3.6E-101 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c12100 b149913d23654fc00c84759e8191fbb3 384 Gene3D G3DSA:1.20.1090.10 182 384 3.8E-61 T 12-10-2018 CLSA_c12100 b149913d23654fc00c84759e8191fbb3 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 371 5.4E-116 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c12100 b149913d23654fc00c84759e8191fbb3 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c12100 b149913d23654fc00c84759e8191fbb3 384 Gene3D G3DSA:3.40.50.1970 1 181 2.0E-54 T 12-10-2018 CLSA_c12100 b149913d23654fc00c84759e8191fbb3 384 SUPERFAMILY SSF56796 4 383 1.07E-115 T 12-10-2018 CLSA_c25840 b36b94f156d883a79ff563bf054609bc 275 Gene3D G3DSA:1.10.287.950 93 275 1.0E-36 T 12-10-2018 CLSA_c25840 b36b94f156d883a79ff563bf054609bc 275 SUPERFAMILY SSF103190 2 110 9.02E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c25840 b36b94f156d883a79ff563bf054609bc 275 SMART SM00283 106 272 4.5E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c25840 b36b94f156d883a79ff563bf054609bc 275 SUPERFAMILY SSF58104 106 274 6.67E-42 T 12-10-2018 CLSA_c25840 b36b94f156d883a79ff563bf054609bc 275 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 150 264 1.1E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Gene3D G3DSA:1.10.290.10 270 400 2.0E-152 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 713 8.0E-247 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 SMART SM00493 3 126 4.0E-13 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.5E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 386 402 1.5E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 512 526 1.5E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 1.5E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 304 313 1.5E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Gene3D G3DSA:2.70.20.10 210 478 2.0E-152 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 SMART SM00436 126 216 2.9E-40 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Pfam PF01131 DNA topoisomerase 153 583 3.0E-126 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Pfam PF01751 Toprim domain 4 133 1.3E-12 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Gene3D G3DSA:3.40.50.140 3 154 2.6E-49 T 12-10-2018 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 298 313 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 SMART SM00437 261 549 1.3E-84 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Gene3D G3DSA:1.10.460.10 160 593 2.0E-152 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 638 60.689 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CLSA_c25990 5328a950c5ce33815d5ff1e7f8576ae5 729 SUPERFAMILY SSF56712 3 597 6.28E-182 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 323 676 5.2E-41 T 12-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 Pfam PF00270 DEAD/DEAH box helicase 324 496 1.8E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 Gene3D G3DSA:3.40.50.300 299 504 2.5E-14 T 12-10-2018 CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 SMART SM00490 575 659 3.9E-6 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 Pfam PF00271 Helicase conserved C-terminal domain 552 657 1.7E-5 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 Gene3D G3DSA:1.10.3210.30 25 236 5.9E-14 T 12-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 SUPERFAMILY SSF52540 321 673 5.76E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 35 243 2.8E-21 T 12-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain CLSA_c19950 41f1e3a8f59aabfcfd3b67e1f689a994 858 Gene3D G3DSA:3.40.50.300 534 696 1.5E-10 T 12-10-2018 CLSA_c42220 604528cae3637b9dbdc24898d8aca99c 289 Gene3D G3DSA:3.90.550.10 1 288 4.8E-94 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42220 604528cae3637b9dbdc24898d8aca99c 289 SUPERFAMILY SSF53448 5 278 1.01E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42220 604528cae3637b9dbdc24898d8aca99c 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 266 2.0E-123 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CLSA_c42220 604528cae3637b9dbdc24898d8aca99c 289 Pfam PF00483 Nucleotidyl transferase 7 269 1.7E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 Pfam PF01047 MarR family 37 95 1.5E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 4.8E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 4.8E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 4.8E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 SUPERFAMILY SSF46785 3 142 1.75E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 Gene3D G3DSA:1.10.10.10 2 143 2.5E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10380 0755b33ab16befb57f060c7cd44c57ed 143 SMART SM00347 30 128 1.8E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 5.5E-34 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 5.5E-34 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 5.5E-34 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 5.5E-34 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 5.5E-34 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 SMART SM00562 2 139 5.4E-59 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 SUPERFAMILY SSF54919 1 139 1.1E-49 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 Pfam PF00334 Nucleoside diphosphate kinase 3 134 1.1E-49 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 141 30.899 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c11340 9086beeb4e1f90ed2a5ccc31bf84ca77 144 Gene3D G3DSA:3.30.70.141 1 143 3.1E-52 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLSA_c23120 710b7a8eb397ea22e0bf39e588413d99 343 Pfam PF03864 Phage major capsid protein E 8 329 2.2E-42 T 12-10-2018 IPR005564 Major capsid protein GpE CLSA_c23120 710b7a8eb397ea22e0bf39e588413d99 343 Gene3D G3DSA:3.90.1690.10 91 285 7.4E-7 T 12-10-2018 CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 SUPERFAMILY SSF46689 4 66 1.55E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 Gene3D G3DSA:1.10.357.10 3 198 2.8E-36 T 12-10-2018 CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 6.4E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c11890 903b01dbfb65ae0b1132c2de2a212be5 200 Pfam PF13972 Bacterial transcriptional repressor 70 194 5.4E-8 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 88 2.4E-30 T 12-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 9 236 5.9E-109 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 120 1.4E-4 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 1.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 SUPERFAMILY SSF51161 88 228 4.84E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 169 201 2.2E-11 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 175 203 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Gene3D G3DSA:2.160.10.10 86 236 4.0E-48 T 12-10-2018 CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Gene3D G3DSA:3.30.70.250 3 85 1.6E-33 T 12-10-2018 CLSA_c27560 2c73f9609bb36f1131130cf838c69ab5 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 236 43.286 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLSA_c10560 df81a1eeb648cfe4368c0408c95ebc6c 245 SUPERFAMILY SSF52540 5 236 2.59E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10560 df81a1eeb648cfe4368c0408c95ebc6c 245 Pfam PF00005 ABC transporter 26 174 9.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c10560 df81a1eeb648cfe4368c0408c95ebc6c 245 SMART SM00382 35 238 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c10560 df81a1eeb648cfe4368c0408c95ebc6c 245 Gene3D G3DSA:3.40.50.300 3 243 2.5E-68 T 12-10-2018 CLSA_c10560 df81a1eeb648cfe4368c0408c95ebc6c 245 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SMART SM00316 619 689 3.6E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF54211 290 486 5.57E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF54791 554 639 1.63E-21 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SMART SM00322 551 616 1.4E-11 T 12-10-2018 IPR004087 K Homology domain GO:0003676 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 1.0E-285 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Pfam PF00575 S1 RNA binding domain 618 689 1.9E-17 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 1.5E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 4.1E-15 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF55666 146 233 6.81E-23 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Pfam PF00013 KH domain 554 612 1.7E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF55666 447 547 8.38E-24 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF54211 7 142 4.05E-40 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Gene3D G3DSA:2.40.50.140 621 693 9.7E-27 T 12-10-2018 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Gene3D G3DSA:3.30.1370.10 549 620 5.7E-19 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Gene3D G3DSA:3.30.230.70 2 228 1.6E-68 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 1.1E-11 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF50249 619 699 6.71E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 239 316 2.7E-19 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Gene3D G3DSA:3.30.230.70 234 548 7.3E-111 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 PIRSF PIRSF005499 1 701 1.2E-271 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 692 28.587 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLSA_c14470 e3543593bda27cd7f2d7e89e23f94444 701 SUPERFAMILY SSF46915 224 323 7.98E-25 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLSA_c36180 4188453b79135e637344285319d9caad 167 Pfam PF02082 Transcriptional regulator 1 83 1.4E-26 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c36180 4188453b79135e637344285319d9caad 167 SUPERFAMILY SSF46785 3 144 3.88E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c36180 4188453b79135e637344285319d9caad 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 142 9.6E-31 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c36180 4188453b79135e637344285319d9caad 167 Gene3D G3DSA:1.10.10.10 1 158 1.1E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36180 4188453b79135e637344285319d9caad 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CLSA_c18230 42753bb6d09c46bd5fc0c0d460d27bfc 189 Gene3D G3DSA:3.30.70.3050 17 188 1.2E-6 T 12-10-2018 CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 Gene3D G3DSA:3.40.50.1000 3 277 5.2E-78 T 12-10-2018 IPR023214 HAD superfamily CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 Gene3D G3DSA:3.30.1240.10 82 209 5.2E-78 T 12-10-2018 CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 SUPERFAMILY SSF56784 1 284 8.27E-68 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 253 2.1E-26 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 280 6.5E-59 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c41410 26b129bac9cdb77de2a9162fd604a4dc 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 280 1.4E-63 T 12-10-2018 CLSA_c00420 363de54d8444b28d257435862d991b11 260 Pfam PF00106 short chain dehydrogenase 7 196 1.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 SUPERFAMILY SSF51735 5 254 2.88E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c00420 363de54d8444b28d257435862d991b11 260 PIRSF PIRSF000126 1 260 5.3E-66 T 12-10-2018 CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 Gene3D G3DSA:3.40.50.720 4 238 7.4E-56 T 12-10-2018 CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c00420 363de54d8444b28d257435862d991b11 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 SUPERFAMILY SSF52518 358 552 6.66E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 Gene3D G3DSA:3.40.50.1220 185 348 5.7E-51 T 12-10-2018 CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 Gene3D G3DSA:3.40.50.970 1 182 1.7E-71 T 12-10-2018 CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 5.2E-56 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 551 4.6E-221 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 SUPERFAMILY SSF52518 1 179 1.03E-63 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 SUPERFAMILY SSF52467 156 351 2.55E-51 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 326 1.0E-40 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 Gene3D G3DSA:3.40.50.970 353 557 1.4E-68 T 12-10-2018 CLSA_c02730 c7a4d08c98ea73dcfdce468cd8d7fa8c 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 1.2E-53 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 Gene3D G3DSA:3.30.70.980 85 237 1.2E-55 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 1.2E-97 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 Gene3D G3DSA:3.30.70.980 130 206 1.2E-55 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 SUPERFAMILY SSF75625 3 244 2.09E-95 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 Pfam PF01709 Transcriptional regulator 5 238 2.2E-97 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 Gene3D G3DSA:1.10.10.200 1 81 2.0E-31 T 12-10-2018 IPR017856 Integrase-like, N-terminal CLSA_c11450 b338b49c5eb21141161262c4cea37741 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 36.418 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF13306 Leucine rich repeats (6 copies) 111 177 3.6E-7 T 12-10-2018 IPR026906 Leucine rich repeat 5 CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF01473 Putative cell wall binding repeat 282 297 0.047 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF01473 Putative cell wall binding repeat 334 352 6.9E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF01473 Putative cell wall binding repeat 262 280 2.4E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF01473 Putative cell wall binding repeat 235 248 0.15 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF01473 Putative cell wall binding repeat 307 323 0.028 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Pfam PF01473 Putative cell wall binding repeat 169 186 0.025 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 SUPERFAMILY SSF69360 168 370 6.97E-46 T 12-10-2018 CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Gene3D G3DSA:2.10.270.10 227 370 2.8E-36 T 12-10-2018 CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Gene3D G3DSA:2.10.270.10 169 226 7.4E-13 T 12-10-2018 CLSA_c34960 75d29d2d5a541a06b1f8dc8a20bfda51 371 Gene3D G3DSA:3.80.10.10 73 168 3.3E-6 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 Gene3D G3DSA:3.40.718.10 2 402 1.7E-180 T 12-10-2018 CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 393 1.7E-59 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 SMART SM01329 9 394 5.3E-102 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 SUPERFAMILY SSF53659 1 400 8.83E-127 T 12-10-2018 CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 269 288 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 PIRSF PIRSF000108 1 402 2.2E-189 T 12-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CLSA_c11660 bf028adf5adba4ad47bd732d047fd92f 402 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 400 1.2E-159 T 12-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CLSA_c42360 39ed7b2fd9bb7ce32ab76103ba5a265e 348 SUPERFAMILY SSF53448 2 281 6.66E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42360 39ed7b2fd9bb7ce32ab76103ba5a265e 348 Pfam PF00483 Nucleotidyl transferase 4 286 1.5E-52 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c42360 39ed7b2fd9bb7ce32ab76103ba5a265e 348 SUPERFAMILY SSF159283 284 345 1.24E-9 T 12-10-2018 CLSA_c42360 39ed7b2fd9bb7ce32ab76103ba5a265e 348 Gene3D G3DSA:3.90.550.10 2 348 1.5E-111 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c14140 60b48defb4b5f5bac4f02c530cfe5b43 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 22 249 6.2E-92 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLSA_c14140 60b48defb4b5f5bac4f02c530cfe5b43 252 Gene3D G3DSA:3.40.1180.10 4 250 3.9E-101 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CLSA_c14140 60b48defb4b5f5bac4f02c530cfe5b43 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 22 250 40.917 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLSA_c14140 60b48defb4b5f5bac4f02c530cfe5b43 252 SUPERFAMILY SSF64005 17 244 1.83E-91 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CLSA_c14140 60b48defb4b5f5bac4f02c530cfe5b43 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 195 212 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CLSA_c14140 60b48defb4b5f5bac4f02c530cfe5b43 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 29 249 3.8E-84 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLSA_c16280 d9254a1e9446f628563054c761b611df 186 SUPERFAMILY SSF55729 17 184 1.39E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c16280 d9254a1e9446f628563054c761b611df 186 Pfam PF00583 Acetyltransferase (GNAT) family 68 160 3.0E-13 T 12-10-2018 IPR000182 GNAT domain CLSA_c16280 d9254a1e9446f628563054c761b611df 186 Gene3D G3DSA:3.40.630.30 18 186 1.1E-33 T 12-10-2018 CLSA_c07540 ded3969d84fae180cbbc6e2a94fa1dff 463 SUPERFAMILY SSF103473 17 452 6.45E-27 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c07540 ded3969d84fae180cbbc6e2a94fa1dff 463 Gene3D G3DSA:1.20.1250.20 2 222 5.7E-6 T 12-10-2018 CLSA_c07540 ded3969d84fae180cbbc6e2a94fa1dff 463 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 4 460 2.7E-132 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CLSA_c07540 ded3969d84fae180cbbc6e2a94fa1dff 463 Pfam PF13347 MFS/sugar transport protein 6 448 4.7E-86 T 12-10-2018 CLSA_c07540 ded3969d84fae180cbbc6e2a94fa1dff 463 Gene3D G3DSA:1.20.1250.20 240 462 7.5E-10 T 12-10-2018 CLSA_c10540 dc7e10423be9cd0f4b404db698a39367 397 SUPERFAMILY SSF56954 4 387 8.5E-17 T 12-10-2018 CLSA_c10540 dc7e10423be9cd0f4b404db698a39367 397 Gene3D G3DSA:1.20.1600.10 20 293 2.2E-10 T 12-10-2018 CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 295 2.0E-47 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 319 3.2E-20 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 SUPERFAMILY SSF51735 101 296 3.4E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 Gene3D G3DSA:3.40.50.720 2 316 2.0E-112 T 12-10-2018 CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 SUPERFAMILY SSF52283 2 134 4.25E-26 T 12-10-2018 CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c18750 e90d715257787cf4dc4eaacd4dbd0127 328 Gene3D G3DSA:3.40.50.720 101 295 2.0E-112 T 12-10-2018 CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 Gene3D G3DSA:3.30.1340.10 1 85 1.0E-29 T 12-10-2018 IPR035895 HPr-like superfamily CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.3E-28 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 Pfam PF00381 PTS HPr component phosphorylation site 4 82 5.5E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 SUPERFAMILY SSF55594 1 83 6.02E-25 T 12-10-2018 IPR035895 HPr-like superfamily CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.4E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.4E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.4E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like CLSA_c14580 ee2164a3c9cce11533791c98b9b54ad1 86 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLSA_c13380 31272163d437a7a4236c89522c568671 232 SUPERFAMILY SSF88659 136 228 2.83E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c13380 31272163d437a7a4236c89522c568671 232 PIRSF PIRSF000770 9 232 7.9E-60 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 Pfam PF04542 Sigma-70 region 2 54 123 5.9E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 Gene3D G3DSA:1.10.10.10 157 231 1.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c13380 31272163d437a7a4236c89522c568671 232 PRINTS PR00046 Major sigma-70 factor signature 177 189 8.0E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 PRINTS PR00046 Major sigma-70 factor signature 198 213 8.0E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 PRINTS PR00046 Major sigma-70 factor signature 78 91 8.0E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 PRINTS PR00046 Major sigma-70 factor signature 213 224 8.0E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 228 6.3E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 Pfam PF04545 Sigma-70, region 4 176 226 7.9E-14 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 Gene3D G3DSA:1.20.120.1810 23 123 1.4E-22 T 12-10-2018 CLSA_c13380 31272163d437a7a4236c89522c568671 232 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 6 228 1.3E-107 T 12-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c13380 31272163d437a7a4236c89522c568671 232 SUPERFAMILY SSF88946 19 122 2.51E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c13380 31272163d437a7a4236c89522c568671 232 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 198 224 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10600 5b788dc21b871872b105e3ed72fbc31e 218 Gene3D G3DSA:3.30.420.10 54 216 2.4E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c10600 5b788dc21b871872b105e3ed72fbc31e 218 SUPERFAMILY SSF53098 50 210 2.73E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c10600 5b788dc21b871872b105e3ed72fbc31e 218 Pfam PF00665 Integrase core domain 56 169 7.0E-21 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c35140 5b788dc21b871872b105e3ed72fbc31e 218 Gene3D G3DSA:3.30.420.10 54 216 2.4E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c35140 5b788dc21b871872b105e3ed72fbc31e 218 SUPERFAMILY SSF53098 50 210 2.73E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c35140 5b788dc21b871872b105e3ed72fbc31e 218 Pfam PF00665 Integrase core domain 56 169 7.0E-21 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c08840 5b788dc21b871872b105e3ed72fbc31e 218 Gene3D G3DSA:3.30.420.10 54 216 2.4E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c08840 5b788dc21b871872b105e3ed72fbc31e 218 SUPERFAMILY SSF53098 50 210 2.73E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c08840 5b788dc21b871872b105e3ed72fbc31e 218 Pfam PF00665 Integrase core domain 56 169 7.0E-21 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c35760 5b788dc21b871872b105e3ed72fbc31e 218 Gene3D G3DSA:3.30.420.10 54 216 2.4E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c35760 5b788dc21b871872b105e3ed72fbc31e 218 SUPERFAMILY SSF53098 50 210 2.73E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c35760 5b788dc21b871872b105e3ed72fbc31e 218 Pfam PF00665 Integrase core domain 56 169 7.0E-21 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c43510 5b788dc21b871872b105e3ed72fbc31e 218 Gene3D G3DSA:3.30.420.10 54 216 2.4E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c43510 5b788dc21b871872b105e3ed72fbc31e 218 SUPERFAMILY SSF53098 50 210 2.73E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c43510 5b788dc21b871872b105e3ed72fbc31e 218 Pfam PF00665 Integrase core domain 56 169 7.0E-21 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 PIRSF PIRSF000445 1 399 7.5E-99 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 Gene3D G3DSA:3.40.50.720 155 288 1.2E-26 T 12-10-2018 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 9 147 3.9E-39 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 Gene3D G3DSA:3.30.460.30 1 150 1.1E-39 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 9 398 3.9E-79 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 SUPERFAMILY SSF69742 9 149 4.05E-37 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 287 1.3E-24 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 307 398 1.1E-5 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 1 397 22.103 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLSA_c31700 e99a5ef1858374a8d5fe3f582e65913c 399 SUPERFAMILY SSF51735 170 292 3.73E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c27580 d632f78492c32118c86f091a1209652e 253 Gene3D G3DSA:3.20.20.370 24 240 5.7E-63 T 12-10-2018 CLSA_c27580 d632f78492c32118c86f091a1209652e 253 Pfam PF01522 Polysaccharide deacetylase 45 169 4.5E-31 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c27580 d632f78492c32118c86f091a1209652e 253 SUPERFAMILY SSF88713 38 236 2.67E-58 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c22570 112bddee09394ff526ba2a5e761af0e0 262 SUPERFAMILY SSF52402 1 256 8.37E-77 T 12-10-2018 CLSA_c22570 112bddee09394ff526ba2a5e761af0e0 262 Pfam PF01012 Electron transfer flavoprotein domain 23 207 2.2E-49 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c22570 112bddee09394ff526ba2a5e761af0e0 262 Gene3D G3DSA:3.40.50.620 1 262 4.5E-96 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c22570 112bddee09394ff526ba2a5e761af0e0 262 SMART SM00893 22 212 4.6E-57 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c22570 112bddee09394ff526ba2a5e761af0e0 262 PIRSF PIRSF000090 1 262 2.1E-89 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CLSA_c25510 3ae89c657427b1cf5c3f9212bef3625b 191 SUPERFAMILY SSF55729 6 131 2.13E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c25510 3ae89c657427b1cf5c3f9212bef3625b 191 Gene3D G3DSA:3.40.630.30 1 150 2.7E-31 T 12-10-2018 CLSA_c25510 3ae89c657427b1cf5c3f9212bef3625b 191 Pfam PF00583 Acetyltransferase (GNAT) family 15 127 5.4E-5 T 12-10-2018 IPR000182 GNAT domain CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 Pfam PF00117 Glutamine amidotransferase class-I 303 528 6.2E-61 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 Gene3D G3DSA:3.40.50.880 287 534 1.2E-109 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 SUPERFAMILY SSF52317 290 531 1.74E-84 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 2.0E-262 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 Pfam PF06418 CTP synthase N-terminus 4 268 8.1E-133 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 Gene3D G3DSA:3.40.50.300 1 286 2.1E-138 T 12-10-2018 CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 Hamap MF_01227 CTP synthase [pyrG]. 3 533 53.179 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CLSA_c04950 fcd03f7844cb297d38cbc0e66f6ff783 534 SUPERFAMILY SSF52540 3 270 2.44E-126 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 SMART SM00345 18 77 2.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 Gene3D G3DSA:1.10.10.10 4 78 2.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 SUPERFAMILY SSF46785 9 78 5.77E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 Pfam PF00155 Aminotransferase class I and II 149 468 1.6E-25 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 1.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 SUPERFAMILY SSF53383 104 478 9.63E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 Gene3D G3DSA:3.40.640.10 154 373 1.1E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c38500 e07cc8207559aba6cf27fceb494bea00 483 Gene3D G3DSA:3.90.1150.10 116 475 1.1E-93 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 SUPERFAMILY SSF50104 2 102 1.35E-32 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 19.041 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 103 1.9E-23 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 6.6E-37 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 SMART SM00739 4 31 2.8E-6 T 12-10-2018 IPR005824 KOW CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 Gene3D G3DSA:2.30.30.30 1 103 3.5E-36 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 Pfam PF00467 KOW motif 7 37 2.6E-8 T 12-10-2018 IPR005824 KOW CLSA_c02130 4e4c59b105d0a71cfa241de446af6adf 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 307 35.122 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 SUPERFAMILY SSF53671 4 306 5.83E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 Gene3D G3DSA:3.40.50.1370 133 292 2.9E-107 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 Gene3D G3DSA:3.40.50.1370 6 301 2.9E-107 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.1E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 1.1E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.1E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 225 234 1.1E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 1.1E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.1E-36 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 304 5.6E-104 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 4.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 302 3.2E-30 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 145 3.8E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLSA_c12450 5dc9c387ae9642f68cafd690828375bd 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c08390 548c4242c4e2cd472faed84af73bbba1 154 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 45 150 9.7E-14 T 12-10-2018 IPR032871 AHH domain-containing protein CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 SUPERFAMILY SSF56645 7 239 6.02E-53 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 Gene3D G3DSA:1.20.140.10 233 382 1.3E-41 T 12-10-2018 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 380 7.6E-38 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 SUPERFAMILY SSF47203 227 381 5.8E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 116 2.0E-12 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 Gene3D G3DSA:1.10.540.10 3 116 1.3E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 Gene3D G3DSA:2.40.110.10 121 232 3.6E-29 T 12-10-2018 CLSA_c22600 04ee0f291fc8131555dd902492ca8ce9 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.1E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CLSA_c39030 6e5449e182fe027372285dc49d2c5f30 69 Gene3D G3DSA:2.30.30.90 11 69 1.4E-15 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain CLSA_c39030 6e5449e182fe027372285dc49d2c5f30 69 SUPERFAMILY SSF50037 6 69 2.06E-12 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal CLSA_c39030 6e5449e182fe027372285dc49d2c5f30 69 Pfam PF04023 FeoA domain 1 69 2.1E-15 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLSA_c39030 6e5449e182fe027372285dc49d2c5f30 69 SMART SM00899 1 69 1.5E-8 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 272 1.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 286 1.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 1.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 1.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 SMART SM00387 220 332 2.1E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 Gene3D G3DSA:1.10.287.130 128 173 3.2E-29 T 12-10-2018 CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 331 4.9E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 SUPERFAMILY SSF55874 183 330 7.07E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 Gene3D G3DSA:3.30.565.10 174 329 3.2E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c09600 f17a246557b3a051f61038975a3ce102 339 SUPERFAMILY SSF47384 114 174 1.57E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c01700 8d031e6514c188b78f8ead1d9f77bb14 340 Hamap MF_00602 Protein-arginine kinase [mcsB]. 3 340 32.14 T 12-10-2018 IPR023660 Protein arginine kinase GO:0016775 CLSA_c01700 8d031e6514c188b78f8ead1d9f77bb14 340 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 49 244 5.2E-59 T 12-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 CLSA_c01700 8d031e6514c188b78f8ead1d9f77bb14 340 SUPERFAMILY SSF55931 7 259 1.82E-71 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLSA_c01700 8d031e6514c188b78f8ead1d9f77bb14 340 Gene3D G3DSA:3.30.590.10 2 245 2.6E-61 T 12-10-2018 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 Gene3D G3DSA:3.90.70.10 2 151 2.3E-52 T 12-10-2018 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 SUPERFAMILY SSF52540 476 720 1.89E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 SUPERFAMILY SSF90123 151 467 5.49E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 Gene3D G3DSA:1.20.1560.10 153 469 8.1E-90 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 Gene3D G3DSA:3.40.50.300 475 728 2.0E-91 T 12-10-2018 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 Pfam PF00664 ABC transporter transmembrane region 169 437 4.3E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 Pfam PF03412 Peptidase C39 family 9 142 3.2E-41 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 13 717 8.0E-210 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 SMART SM00382 510 696 7.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 Pfam PF00005 ABC transporter 501 650 7.8E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c09770 0ed603a4d21fcf20e4769adca2b828b1 739 ProSitePatterns PS00211 ABC transporters family signature. 622 636 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 25 43 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 114 130 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 295 314 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 160 180 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 132 149 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 217 238 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 PRINTS PR00681 Ribosomal protein S1 signature 334 352 5.6E-39 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SUPERFAMILY SSF50249 17 117 7.46E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SUPERFAMILY SSF50249 265 353 5.42E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 Gene3D G3DSA:2.40.50.140 277 360 7.9E-27 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 Gene3D G3DSA:2.40.50.140 192 275 2.0E-25 T 12-10-2018 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 Pfam PF00575 S1 RNA binding domain 279 351 3.3E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 Pfam PF00575 S1 RNA binding domain 23 92 6.6E-12 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 Pfam PF00575 S1 RNA binding domain 195 262 1.0E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SUPERFAMILY SSF50249 194 275 7.46E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SUPERFAMILY SSF50249 115 190 3.43E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SMART SM00316 280 351 3.7E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SMART SM00316 195 265 1.6E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SMART SM00316 109 176 2.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 SMART SM00316 23 93 1.4E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c06050 d53ab15c2e0b8d469bc054d23ce242c6 384 Gene3D G3DSA:2.40.50.140 9 106 1.8E-17 T 12-10-2018 CLSA_c26920 2f2213341ac315e1a6bde7a5647dd2f6 206 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 22 205 4.5E-52 T 12-10-2018 IPR014195 Sporulation stage III, protein AG CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 1.1E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 1.1E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 1.1E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 PRINTS PR00986 Valyl-tRNA synthetase signature 448 469 1.1E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 PRINTS PR00986 Valyl-tRNA synthetase signature 479 497 1.1E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Gene3D G3DSA:3.40.50.620 27 528 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 SUPERFAMILY SSF52374 8 577 1.31E-143 T 12-10-2018 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 SUPERFAMILY SSF50677 196 346 7.33E-64 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 565 5.4E-214 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 SUPERFAMILY SSF46589 815 879 1.62E-16 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Gene3D G3DSA:1.10.730.10 8 743 0.0 T 12-10-2018 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 815 879 2.4E-20 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Gene3D G3DSA:1.10.287.380 808 880 4.2E-18 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Hamap MF_02004 Valine--tRNA ligase [valS]. 7 880 15.699 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Gene3D G3DSA:3.90.740.10 180 346 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 SUPERFAMILY SSF47323 579 830 9.72E-69 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 Pfam PF08264 Anticodon-binding domain of tRNA 610 756 2.3E-44 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CLSA_c27650 1d047cd23d85eefc0f5748711d64d841 880 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 861 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 SUPERFAMILY SSF54570 2 84 6.8E-34 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 1.6E-41 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.247 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 Pfam PF00203 Ribosomal protein S19 3 83 6.3E-34 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 PIRSF PIRSF002144 1 91 6.6E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 Gene3D G3DSA:3.30.860.10 1 91 4.0E-38 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.0E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.0E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02050 cf2c8c5a3b8d5685a255dfd56db4bae0 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.0E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 563 26.102 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Gene3D G3DSA:3.30.1360.70 2 103 2.9E-30 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 SUPERFAMILY SSF47323 442 563 2.35E-31 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 295 316 9.6E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 127 143 9.6E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 112 127 9.6E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 151 164 9.6E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 20 563 8.4E-159 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Gene3D G3DSA:3.40.50.620 104 441 5.4E-125 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Pfam PF05746 DALR anticodon binding domain 448 563 1.4E-30 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 SUPERFAMILY SSF55190 5 103 7.32E-26 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 SUPERFAMILY SSF52374 106 442 4.88E-98 T 12-10-2018 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 81 7.8E-17 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Pfam PF00750 tRNA synthetases class I (R) 92 434 2.4E-95 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 120 131 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 SMART SM00836 448 563 2.5E-39 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 SMART SM01016 1 82 3.9E-23 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c12630 c0844f074a02f752348153f6025d29cf 563 Gene3D G3DSA:1.10.730.10 442 563 6.4E-34 T 12-10-2018 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 Hamap MF_00020 Acetate kinase [ackA]. 1 401 189.579 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 SUPERFAMILY SSF53067 158 399 1.6E-85 T 12-10-2018 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PRINTS PR00471 Acetate kinase family signature 204 225 4.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PRINTS PR00471 Acetate kinase family signature 324 340 4.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PRINTS PR00471 Acetate kinase family signature 380 392 4.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PRINTS PR00471 Acetate kinase family signature 302 315 4.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PRINTS PR00471 Acetate kinase family signature 3 14 4.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PRINTS PR00471 Acetate kinase family signature 174 187 4.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 Pfam PF00871 Acetokinase family 2 393 2.2E-161 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 Gene3D G3DSA:3.30.420.40 1 195 1.7E-78 T 12-10-2018 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 Gene3D G3DSA:3.30.420.40 197 401 8.5E-80 T 12-10-2018 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 PIRSF PIRSF000722 1 401 2.6E-154 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 SUPERFAMILY SSF53067 1 196 1.75E-72 T 12-10-2018 CLSA_c13860 903aa6678c13152b3ed39cc87c7360c2 401 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 4.9E-159 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 Gene3D G3DSA:3.30.70.1560 130 213 9.5E-55 T 12-10-2018 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 SMART SM00363 3 61 1.4E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 226 1.9E-48 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 Pfam PF00849 RNA pseudouridylate synthase 65 195 1.8E-19 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 Gene3D G3DSA:3.10.290.10 1 60 4.6E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 SUPERFAMILY SSF55120 62 231 1.85E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 Pfam PF01479 S4 domain 3 45 2.8E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 Gene3D G3DSA:3.30.70.580 65 230 9.5E-55 T 12-10-2018 CLSA_c26210 4d4633e726a0c69ae8ed57b82798bca3 236 SUPERFAMILY SSF55174 1 91 2.02E-16 T 12-10-2018 CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 Pfam PF00027 Cyclic nucleotide-binding domain 32 116 2.1E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 Gene3D G3DSA:2.60.120.1460 18 226 2.4E-43 T 12-10-2018 CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 Pfam PF13545 Crp-like helix-turn-helix domain 152 225 3.6E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 SMART SM00419 170 218 1.6E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 SMART SM00100 13 130 3.0E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 SUPERFAMILY SSF46785 149 226 4.38E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c26570 99f23cf621f0d82f19502e94acc419eb 229 SUPERFAMILY SSF51206 8 142 1.44E-27 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c04880 78a5570323111bf8535c6922ec743ad7 281 PIRSF PIRSF032067 6 279 1.9E-66 T 12-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 CLSA_c04880 78a5570323111bf8535c6922ec743ad7 281 Gene3D G3DSA:3.40.50.880 5 266 4.4E-78 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c04880 78a5570323111bf8535c6922ec743ad7 281 Pfam PF03575 Peptidase family S51 9 212 7.3E-26 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CLSA_c04880 78a5570323111bf8535c6922ec743ad7 281 SUPERFAMILY SSF52317 9 221 5.38E-25 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c04880 78a5570323111bf8535c6922ec743ad7 281 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 9 258 2.1E-103 T 12-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 PIRSF PIRSF000098 1 430 1.9E-166 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 Gene3D G3DSA:3.30.70.260 345 418 5.2E-158 T 12-10-2018 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 Gene3D G3DSA:3.30.360.10 136 344 5.2E-158 T 12-10-2018 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 SUPERFAMILY SSF51735 1 158 8.14E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 Gene3D G3DSA:3.40.50.720 4 336 5.2E-158 T 12-10-2018 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 SUPERFAMILY SSF55347 137 302 3.53E-53 T 12-10-2018 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 5.9E-18 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 SUPERFAMILY SSF55021 348 421 1.86E-13 T 12-10-2018 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 Pfam PF00742 Homoserine dehydrogenase 137 315 2.9E-64 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CLSA_c28350 807016d80b2e28b0a95d193cf1903361 431 Pfam PF01842 ACT domain 350 415 1.1E-11 T 12-10-2018 IPR002912 ACT domain CLSA_c08550 c14586922c49d54e65c1f4201044a7f6 160 SUPERFAMILY SSF52218 1 159 3.54E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c08550 c14586922c49d54e65c1f4201044a7f6 160 Gene3D G3DSA:3.40.50.360 1 160 2.6E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c08550 c14586922c49d54e65c1f4201044a7f6 160 Pfam PF12724 Flavodoxin domain 5 89 4.2E-9 T 12-10-2018 IPR026816 Flavodoxin domain CLSA_c08550 c14586922c49d54e65c1f4201044a7f6 160 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 SUPERFAMILY SSF52540 7 270 2.09E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 7 327 3.1E-170 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 SMART SM00382 60 231 3.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 Pfam PF00154 recA bacterial DNA recombination protein 10 271 8.7E-141 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 ProSitePatterns PS00321 recA signature. 216 224 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 Gene3D G3DSA:3.40.50.300 29 270 1.4E-83 T 12-10-2018 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 Gene3D G3DSA:3.30.250.10 271 348 6.3E-28 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 SUPERFAMILY SSF54752 271 329 1.96E-21 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 Hamap MF_00268 Protein RecA [recA]. 8 332 51.511 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 PRINTS PR00142 RecA protein signature 96 125 7.1E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 PRINTS PR00142 RecA protein signature 213 241 7.1E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 PRINTS PR00142 RecA protein signature 168 197 7.1E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 PRINTS PR00142 RecA protein signature 246 275 7.1E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 PRINTS PR00142 RecA protein signature 300 317 7.1E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c14550 c0643948f852fdb1c0c9c34cd5a13159 358 PRINTS PR00142 RecA protein signature 130 159 7.1E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Gene3D G3DSA:3.40.50.970 4 201 7.2E-32 T 12-10-2018 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 SUPERFAMILY SSF52518 415 634 3.04E-48 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Gene3D G3DSA:3.40.50.1220 214 410 2.5E-35 T 12-10-2018 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 196 8.7E-37 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 641 6.6E-286 T 12-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 353 7.8E-31 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 475 494 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 SUPERFAMILY SSF52467 186 375 5.46E-39 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 439 598 1.1E-34 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Gene3D G3DSA:3.40.50.970 411 611 2.0E-39 T 12-10-2018 CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 SUPERFAMILY SSF52518 2 208 2.06E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c12140 3f9dbd8d7ea59dfd6ef245f5ed5b6ada 643 Hamap MF_01669 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [iolD]. 1 643 58.119 T 12-10-2018 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes GO:0000287|GO:0016787|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 SUPERFAMILY SSF55060 206 386 1.76E-56 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 Pfam PF08544 GHMP kinases C terminal 285 367 7.7E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00473 Galactokinase signature 92 103 6.4E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00473 Galactokinase signature 270 284 6.4E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00473 Galactokinase signature 113 131 6.4E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00473 Galactokinase signature 27 45 6.4E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 Gene3D G3DSA:3.30.230.10 22 202 4.5E-137 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 Pfam PF10509 Galactokinase galactose-binding signature 9 58 2.2E-20 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 Pfam PF00288 GHMP kinases N terminal domain 116 182 7.6E-14 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 Gene3D G3DSA:3.30.70.890 203 363 4.5E-137 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 TIGRFAM TIGR00131 gal_kin: galactokinase 7 387 4.8E-136 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 Hamap MF_00246 Galactokinase [galK]. 25 387 47.182 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PIRSF PIRSF000530 1 389 6.0E-129 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00959 Mevalonate kinase family signature 120 142 3.1E-43 T 12-10-2018 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00959 Mevalonate kinase family signature 334 351 3.1E-43 T 12-10-2018 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00959 Mevalonate kinase family signature 25 49 3.1E-43 T 12-10-2018 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 PRINTS PR00959 Mevalonate kinase family signature 163 182 3.1E-43 T 12-10-2018 CLSA_c08530 b1bc6b189afe4ce7eb9f4abab36c6693 389 SUPERFAMILY SSF54211 4 204 2.66E-66 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 PIRSF PIRSF000429 1 378 3.0E-88 T 12-10-2018 IPR002155 Thiolase GO:0016747 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 376 8.0E-96 T 12-10-2018 IPR002155 Thiolase GO:0016747 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 SUPERFAMILY SSF53901 3 378 2.21E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 Pfam PF00108 Thiolase, N-terminal domain 4 247 1.3E-40 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 Gene3D G3DSA:3.40.47.10 5 261 3.1E-96 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 Gene3D G3DSA:3.40.47.10 125 375 3.1E-96 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 Pfam PF02803 Thiolase, C-terminal domain 256 377 3.7E-24 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CLSA_c28130 af5b1dbb4d50d7edfaabb83b4ede6f1a 378 ProSitePatterns PS00737 Thiolases signature 2. 324 340 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CLSA_c29040 f36f16fe3b85cd20d79e2e339dabe66b 626 Pfam PF13476 AAA domain 34 270 1.2E-9 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain CLSA_c29040 f36f16fe3b85cd20d79e2e339dabe66b 626 SUPERFAMILY SSF52540 15 87 4.16E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40320 79399f0d4308d2809d80f6d485f829e1 212 Gene3D G3DSA:1.10.3720.10 1 212 3.1E-49 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c40320 79399f0d4308d2809d80f6d485f829e1 212 SUPERFAMILY SSF161098 4 200 5.63E-47 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c40320 79399f0d4308d2809d80f6d485f829e1 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 9.8E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 SUPERFAMILY SSF46894 128 231 1.02E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 Gene3D G3DSA:3.40.50.2300 1 131 6.7E-35 T 12-10-2018 CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 Gene3D G3DSA:1.10.10.10 132 232 1.3E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 SMART SM00448 2 112 9.3E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 SMART SM00862 154 230 4.5E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 9.1E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 SUPERFAMILY SSF52172 1 124 1.57E-38 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c10530 edf6d9c95a4f883cb0ae18a6bdc191b3 232 Pfam PF00072 Response regulator receiver domain 4 113 2.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Gene3D G3DSA:1.10.287.470 97 127 7.9E-10 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Gene3D G3DSA:2.40.50.100 245 282 5.2E-19 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Pfam PF13437 HlyD family secretion protein 244 357 9.3E-18 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Gene3D G3DSA:2.40.50.100 63 96 7.9E-10 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 SUPERFAMILY SSF111369 177 336 3.01E-5 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Pfam PF13533 Biotin-lipoyl like 65 111 3.1E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Gene3D G3DSA:2.40.30.170 283 372 5.2E-19 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 375 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 257 278 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 375 389 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 291 315 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 338 2.7E-32 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 SUPERFAMILY SSF111369 63 136 1.96E-8 T 12-10-2018 CLSA_c09780 4b800087a0e064e6ef9c02307fca262e 389 Gene3D G3DSA:1.10.287.470 170 244 5.2E-19 T 12-10-2018 CLSA_c02750 3531d101b6e381b096e4765df2ca78f2 83 Gene3D G3DSA:3.40.1440.10 1 83 4.0E-33 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CLSA_c02750 3531d101b6e381b096e4765df2ca78f2 83 Pfam PF01541 GIY-YIG catalytic domain 1 73 1.2E-17 T 12-10-2018 IPR000305 GIY-YIG endonuclease CLSA_c02750 3531d101b6e381b096e4765df2ca78f2 83 SUPERFAMILY SSF82771 2 71 6.28E-15 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 SUPERFAMILY SSF56014 100 300 7.63E-30 T 12-10-2018 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 25 75 6.8E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 SUPERFAMILY SSF55124 4 79 8.87E-15 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 99 297 3.4E-23 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 Gene3D G3DSA:3.90.480.20 14 102 5.0E-10 T 12-10-2018 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 Gene3D G3DSA:3.30.70.20 163 227 2.6E-13 T 12-10-2018 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 PRINTS PR00397 Sirohaem Fe-binding site signature 102 120 1.6E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 PRINTS PR00397 Sirohaem Fe-binding site signature 143 161 1.6E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 143 159 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 SUPERFAMILY SSF54862 147 229 7.18E-18 T 12-10-2018 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 Pfam PF14697 4Fe-4S dicluster domain 169 216 1.5E-10 T 12-10-2018 CLSA_c26540 d829828a1f6321892e4596bde4591ae6 326 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 2 315 2.8E-159 T 12-10-2018 IPR014261 Sulphite reductase, subunit C CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 Pfam PF00501 AMP-binding enzyme 13 403 2.1E-77 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 SUPERFAMILY SSF56801 14 501 7.06E-109 T 12-10-2018 CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 2 502 2.5E-170 T 12-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 26 428 1.8E-105 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 Gene3D G3DSA:3.40.50.12780 3 396 3.4E-105 T 12-10-2018 CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 503 190.728 T 12-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 Gene3D G3DSA:3.30.300.30 398 503 2.6E-25 T 12-10-2018 CLSA_c43240 0111c539e04b5eec8cb84665ae2355df 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 492 1.3E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 SUPERFAMILY SSF58104 240 570 5.49E-51 T 12-10-2018 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 SMART SM00283 280 570 9.3E-15 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 Gene3D G3DSA:1.10.287.950 267 570 9.2E-48 T 12-10-2018 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 8.8E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 421 450 8.8E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 419 8.8E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 522 1.8E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 Gene3D G3DSA:1.20.1480.50 169 266 1.3E-12 T 12-10-2018 CLSA_c37420 54a53e4514167e62689e5fc105f6bd4b 571 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 183 1.2E-33 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 Pfam PF00072 Response regulator receiver domain 6 108 2.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 SMART SM00448 4 119 1.6E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 SUPERFAMILY SSF52172 1 108 1.27E-28 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 348 33.801 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 Gene3D G3DSA:3.40.50.2300 2 137 1.6E-28 T 12-10-2018 CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 Gene3D G3DSA:3.40.50.180 156 347 6.2E-61 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 Pfam PF01339 CheB methylesterase 165 345 1.0E-54 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 PIRSF PIRSF000876 1 349 6.4E-114 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c23250 25ab5c43c2271738706a27680f350df8 349 SUPERFAMILY SSF52738 162 346 5.89E-56 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c05610 80ace9182f85db1b80188f55649366a2 191 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 24.182 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CLSA_c05610 80ace9182f85db1b80188f55649366a2 191 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 2 191 9.8E-73 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 CLSA_c05610 80ace9182f85db1b80188f55649366a2 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 191 2.0E-51 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CLSA_c05610 80ace9182f85db1b80188f55649366a2 191 PIRSF PIRSF006102 1 191 5.1E-52 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Gene3D G3DSA:3.40.50.300 278 614 3.7E-75 T 12-10-2018 CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Gene3D G3DSA:1.10.486.10 379 527 3.7E-75 T 12-10-2018 CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 SUPERFAMILY SSF52540 3 611 1.41E-116 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Gene3D G3DSA:3.40.50.300 5 268 1.5E-64 T 12-10-2018 CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Pfam PF13361 UvrD-like helicase C-terminal domain 454 595 3.8E-24 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Gene3D G3DSA:1.10.10.160 108 184 1.5E-64 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Pfam PF13361 UvrD-like helicase C-terminal domain 273 423 8.2E-21 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLSA_c31090 9a57650f1831da88dd45850899b1e905 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 135 267 6.0E-30 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF07532 Bacterial Ig-like domain (group 4) 1274 1328 1.5E-10 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF07532 Bacterial Ig-like domain (group 4) 1371 1424 3.4E-9 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF07532 Bacterial Ig-like domain (group 4) 1178 1231 1.3E-10 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00409 977 1056 3.3 T 12-10-2018 IPR003599 Immunoglobulin subtype CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00409 428 506 5.4 T 12-10-2018 IPR003599 Immunoglobulin subtype CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00409 1071 1160 0.25 T 12-10-2018 IPR003599 Immunoglobulin subtype CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF01473 Putative cell wall binding repeat 1820 1837 0.0012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF01473 Putative cell wall binding repeat 1898 1916 2.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF01473 Putative cell wall binding repeat 1871 1887 0.0067 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SUPERFAMILY SSF52058 81 304 4.47E-27 T 12-10-2018 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SUPERFAMILY SSF69360 1807 1934 2.88E-27 T 12-10-2018 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:2.10.270.10 1760 1934 2.1E-30 T 12-10-2018 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00635 969 1051 5.8E-9 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00635 420 501 2.5E-10 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:3.80.10.10 222 315 2.7E-32 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00060 327 408 2.3 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SMART SM00060 652 731 4.1 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF13306 Leucine rich repeats (6 copies) 83 211 2.1E-43 T 12-10-2018 IPR026906 Leucine rich repeat 5 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF13306 Leucine rich repeats (6 copies) 528 621 1.5E-26 T 12-10-2018 IPR026906 Leucine rich repeat 5 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:2.60.40.10 329 416 1.5E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:2.60.40.1080 968 1058 1.0E-10 T 12-10-2018 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:2.60.40.1080 420 501 1.0E-14 T 12-10-2018 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SUPERFAMILY SSF48726 1064 1160 1.17E-6 T 12-10-2018 IPR036179 Immunoglobulin-like domain superfamily CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:2.60.40.10 1063 1159 4.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SUPERFAMILY SSF52058 539 622 3.2E-11 T 12-10-2018 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF02368 Bacterial Ig-like domain (group 2) 422 498 2.5E-11 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Pfam PF02368 Bacterial Ig-like domain (group 2) 970 1043 1.5E-7 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 SUPERFAMILY SSF49373 421 505 2.12E-6 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:3.80.10.10 502 736 1.8E-36 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c40930 c2a5e595a8c905600be29314b3b95da4 1934 Gene3D G3DSA:3.80.10.10 37 221 2.3E-66 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c22030 3e47292199ad5ef9921c1f790f181eff 356 SUPERFAMILY SSF109604 122 287 3.14E-27 T 12-10-2018 CLSA_c22030 3e47292199ad5ef9921c1f790f181eff 356 Pfam PF01966 HD domain 128 251 7.1E-12 T 12-10-2018 IPR006674 HD domain CLSA_c22030 3e47292199ad5ef9921c1f790f181eff 356 SMART SM00471 123 261 2.5E-9 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c22030 3e47292199ad5ef9921c1f790f181eff 356 Gene3D G3DSA:1.10.3210.10 2 292 3.8E-57 T 12-10-2018 CLSA_c04170 f7538051e0c17beb759285af87371281 266 Pfam PF01695 IstB-like ATP binding protein 122 231 2.4E-16 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CLSA_c04170 f7538051e0c17beb759285af87371281 266 Gene3D G3DSA:3.40.50.300 71 256 1.8E-37 T 12-10-2018 CLSA_c04170 f7538051e0c17beb759285af87371281 266 SUPERFAMILY SSF52540 89 255 2.01E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15330 6981ba9b37c98e129515632fabb27d4c 294 Gene3D G3DSA:3.20.20.370 69 292 2.6E-72 T 12-10-2018 CLSA_c15330 6981ba9b37c98e129515632fabb27d4c 294 SUPERFAMILY SSF88713 93 281 9.64E-44 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c15330 6981ba9b37c98e129515632fabb27d4c 294 Pfam PF01522 Polysaccharide deacetylase 130 253 2.3E-33 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 2 246 5.0E-102 T 12-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 Gene3D G3DSA:3.30.950.10 110 229 4.9E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 SUPERFAMILY SSF53790 1 246 1.57E-64 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 Gene3D G3DSA:3.40.1010.10 1 109 1.7E-28 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 75 108 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 5 19 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CLSA_c32440 ff29a7ad39d13e4ac12c41401c1f2cb8 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 206 3.1E-42 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c25000 fd3b418fb5ad400616d71d0928f4e154 230 Pfam PF01881 CRISPR associated protein Cas6 101 226 1.8E-7 T 12-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLSA_c25000 fd3b418fb5ad400616d71d0928f4e154 230 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 41 226 2.6E-18 T 12-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLSA_c25000 fd3b418fb5ad400616d71d0928f4e154 230 Gene3D G3DSA:3.30.70.1900 110 227 6.1E-7 T 12-10-2018 CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 Gene3D G3DSA:3.30.70.140 1 91 3.2E-27 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 SUPERFAMILY SSF57825 95 139 8.24E-15 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 Gene3D G3DSA:2.30.30.20 93 140 1.8E-13 T 12-10-2018 CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 138 1.1E-15 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 4 92 2.0E-22 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 SUPERFAMILY SSF54893 1 93 1.44E-29 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily CLSA_c12460 f2f1386825796db467a438e4cd8da071 140 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 89 1.9E-27 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 Gene3D G3DSA:1.10.287.130 252 319 4.1E-18 T 12-10-2018 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 SUPERFAMILY SSF55874 324 454 1.38E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 Gene3D G3DSA:3.30.565.10 324 469 4.4E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 SMART SM00387 362 469 5.5E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 2.7E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 2.7E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 454 4.3E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 5.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 SUPERFAMILY SSF47384 245 317 1.14E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 Gene3D G3DSA:1.20.1480.50 155 251 1.5E-14 T 12-10-2018 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 SMART SM00304 194 247 1.6E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 SUPERFAMILY SSF158472 195 246 1.11E-8 T 12-10-2018 CLSA_c33680 968753b74ee2e150e9499486eacc78bc 470 SMART SM00388 255 321 5.5E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 PIRSF PIRSF001365 1 287 6.1E-82 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 Gene3D G3DSA:3.20.20.70 1 287 2.0E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 SMART SM01130 2 286 1.2E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.4E-23 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.4E-23 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.4E-23 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.4E-23 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 Pfam PF00701 Dihydrodipicolinate synthetase family 3 286 1.6E-73 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 286 9.8E-82 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 48.235 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CLSA_c44780 d8ecc937a104aceb3a74063c29c5a440 287 SUPERFAMILY SSF51569 3 286 3.04E-83 T 12-10-2018 CLSA_c32700 4bfa2982f8d67df02837633ee1199ed5 337 Pfam PF01032 FecCD transport family 13 333 5.7E-90 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CLSA_c32700 4bfa2982f8d67df02837633ee1199ed5 337 Gene3D G3DSA:1.10.3470.10 2 337 1.0E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like CLSA_c32700 4bfa2982f8d67df02837633ee1199ed5 337 SUPERFAMILY SSF81345 5 334 3.4E-75 T 12-10-2018 IPR037294 ABC transporter, BtuC-like CLSA_c43180 239cf8205ced437176741f36d925f654 123 SUPERFAMILY SSF56214 1 121 6.28E-30 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c43180 239cf8205ced437176741f36d925f654 123 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 93 3.9E-18 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c43180 239cf8205ced437176741f36d925f654 123 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 121 4.3E-29 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CLSA_c43180 239cf8205ced437176741f36d925f654 123 Gene3D G3DSA:3.90.470.20 1 122 4.5E-36 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c43180 239cf8205ced437176741f36d925f654 123 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 17 86 4.0E-18 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CLSA_c43180 239cf8205ced437176741f36d925f654 123 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 24.749 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CLSA_c43180 239cf8205ced437176741f36d925f654 123 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 122 1.6E-30 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 192 278 2.9E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 SUPERFAMILY SSF55874 149 281 7.99E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 SMART SM00387 191 293 7.7E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 Gene3D G3DSA:1.10.287.130 53 143 8.6E-17 T 12-10-2018 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 SUPERFAMILY SSF47384 67 146 8.44E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 PRINTS PR01780 Lantibiotic regulatory protein signature 248 263 2.4E-5 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 PRINTS PR01780 Lantibiotic regulatory protein signature 89 105 2.4E-5 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 Pfam PF00512 His Kinase A (phospho-acceptor) domain 82 140 9.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 SMART SM00388 80 145 1.3E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20270 39f8243c413b866e9dab349f94d87aab 293 Gene3D G3DSA:3.30.565.10 149 287 1.5E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c38210 895b680d2a7b6dbc47039eb024b36db8 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 77 1.4E-14 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLSA_c38210 895b680d2a7b6dbc47039eb024b36db8 197 PIRSF PIRSF000847 3 196 2.0E-25 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CLSA_c38210 895b680d2a7b6dbc47039eb024b36db8 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLSA_c38210 895b680d2a7b6dbc47039eb024b36db8 197 Gene3D G3DSA:1.20.120.1760 2 182 9.2E-11 T 12-10-2018 CLSA_c20860 142c6d80b29e446818c9c4eea749814a 317 Gene3D G3DSA:3.40.50.300 2 267 6.1E-58 T 12-10-2018 CLSA_c20860 142c6d80b29e446818c9c4eea749814a 317 SMART SM00382 43 224 7.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c20860 142c6d80b29e446818c9c4eea749814a 317 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c20860 142c6d80b29e446818c9c4eea749814a 317 SUPERFAMILY SSF52540 22 240 1.84E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20860 142c6d80b29e446818c9c4eea749814a 317 Pfam PF00005 ABC transporter 34 175 3.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c12110 f3587071f527950dbc6094f63d5fc554 281 PIRSF PIRSF001359 1 281 1.3E-79 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c12110 f3587071f527950dbc6094f63d5fc554 281 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 281 2.6E-77 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c12110 f3587071f527950dbc6094f63d5fc554 281 SUPERFAMILY SSF51569 3 281 8.5E-87 T 12-10-2018 CLSA_c12110 f3587071f527950dbc6094f63d5fc554 281 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 280 2.7E-89 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c12110 f3587071f527950dbc6094f63d5fc554 281 Gene3D G3DSA:3.20.20.70 1 281 5.0E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c12110 f3587071f527950dbc6094f63d5fc554 281 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c16520 e4545ec2e10f1c410c81e4b317977b35 131 Pfam PF13411 MerR HTH family regulatory protein 4 72 8.7E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c16520 e4545ec2e10f1c410c81e4b317977b35 131 SUPERFAMILY SSF46955 4 112 6.59E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c16520 e4545ec2e10f1c410c81e4b317977b35 131 SMART SM00422 4 73 5.7E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c16520 e4545ec2e10f1c410c81e4b317977b35 131 Gene3D G3DSA:1.10.1660.10 2 126 1.4E-29 T 12-10-2018 CLSA_c33270 de8152a8fbcf47f44c105393dc859fc3 256 SUPERFAMILY SSF52540 3 251 1.36E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c33270 de8152a8fbcf47f44c105393dc859fc3 256 SMART SM00382 28 230 2.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c33270 de8152a8fbcf47f44c105393dc859fc3 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 251 6.1E-10 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLSA_c33270 de8152a8fbcf47f44c105393dc859fc3 256 Gene3D G3DSA:3.40.50.300 1 253 9.8E-61 T 12-10-2018 CLSA_c33270 de8152a8fbcf47f44c105393dc859fc3 256 Pfam PF00005 ABC transporter 20 179 1.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c19500 8160ce7835e9515f86888ac7fe6191b3 466 Hamap MF_00675 Uronate isomerase [uxaC]. 2 466 50.344 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLSA_c19500 8160ce7835e9515f86888ac7fe6191b3 466 SUPERFAMILY SSF51556 2 465 5.27E-188 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c19500 8160ce7835e9515f86888ac7fe6191b3 466 Gene3D G3DSA:3.20.20.140 7 464 5.9E-202 T 12-10-2018 CLSA_c19500 8160ce7835e9515f86888ac7fe6191b3 466 Gene3D G3DSA:1.10.2020.10 46 136 5.9E-202 T 12-10-2018 CLSA_c19500 8160ce7835e9515f86888ac7fe6191b3 466 Pfam PF02614 Glucuronate isomerase 1 464 2.8E-227 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLSA_c09540 75bd7b89a683b36a76caddae96db3dde 255 SMART SM00382 33 221 1.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c09540 75bd7b89a683b36a76caddae96db3dde 255 SUPERFAMILY SSF52540 4 224 8.65E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09540 75bd7b89a683b36a76caddae96db3dde 255 Gene3D G3DSA:3.40.50.300 1 244 7.4E-68 T 12-10-2018 CLSA_c09540 75bd7b89a683b36a76caddae96db3dde 255 Pfam PF00005 ABC transporter 25 172 4.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c18020 3564bc10f2ec6805f677e63ac5d39fb0 257 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 74 242 8.0E-71 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CLSA_c18020 3564bc10f2ec6805f677e63ac5d39fb0 257 Gene3D G3DSA:2.30.210.20 44 99 1.2E-24 T 12-10-2018 CLSA_c18020 3564bc10f2ec6805f677e63ac5d39fb0 257 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 257 74.55 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CLSA_c18020 3564bc10f2ec6805f677e63ac5d39fb0 257 Gene3D G3DSA:3.40.630.70 100 257 1.4E-58 T 12-10-2018 CLSA_c18020 3564bc10f2ec6805f677e63ac5d39fb0 257 SUPERFAMILY SSF55729 43 254 6.67E-82 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c18020 3564bc10f2ec6805f677e63ac5d39fb0 257 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 71 255 9.7E-56 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF14493 Helix-turn-helix domain 719 811 9.9E-19 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SMART SM00341 618 699 9.2E-5 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SMART SM00341 513 593 6.5E-16 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Gene3D G3DSA:3.40.50.300 1 201 3.1E-77 T 12-10-2018 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF09382 RQC domain 403 510 1.6E-35 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF00270 DEAD/DEAH box helicase 21 182 2.6E-21 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Gene3D G3DSA:1.10.10.10 334 512 1.2E-50 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SUPERFAMILY SSF47819 620 703 8.07E-17 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 457 1.7E-149 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SMART SM00487 14 211 5.8E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SUPERFAMILY SSF47819 513 592 2.83E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SUPERFAMILY SSF52540 58 345 2.92E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 585 4.9E-242 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF00271 Helicase conserved C-terminal domain 216 323 2.2E-19 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Gene3D G3DSA:1.10.150.80 513 596 7.0E-25 T 12-10-2018 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Gene3D G3DSA:1.10.150.80 616 702 1.3E-19 T 12-10-2018 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF16124 RecQ zinc-binding 335 398 2.9E-16 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SMART SM00490 243 324 4.9E-27 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SUPERFAMILY SSF46785 396 539 3.72E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF00570 HRDC domain 623 689 4.4E-15 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Pfam PF00570 HRDC domain 517 583 2.4E-20 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 Gene3D G3DSA:3.40.50.300 202 333 1.8E-39 T 12-10-2018 CLSA_c17650 ef0e47391c1f390ceeb5a38e0bd8ed29 817 SMART SM00956 405 508 4.8E-47 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLSA_c28120 f111872b5e5b329a6eef7efcfb23d7b5 495 Gene3D G3DSA:3.40.50.12780 1 396 5.9E-33 T 12-10-2018 CLSA_c28120 f111872b5e5b329a6eef7efcfb23d7b5 495 Gene3D G3DSA:3.30.300.310 397 492 1.2E-16 T 12-10-2018 CLSA_c28120 f111872b5e5b329a6eef7efcfb23d7b5 495 SUPERFAMILY SSF56801 6 490 1.83E-66 T 12-10-2018 CLSA_c28120 f111872b5e5b329a6eef7efcfb23d7b5 495 Pfam PF00501 AMP-binding enzyme 14 357 4.5E-27 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c28120 f111872b5e5b329a6eef7efcfb23d7b5 495 Pfam PF13193 AMP-binding enzyme C-terminal domain 409 482 5.6E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 SMART SM00740 432 498 6.5E-11 T 12-10-2018 IPR005543 PASTA domain CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 SMART SM00740 365 431 2.5E-17 T 12-10-2018 IPR005543 PASTA domain CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 SMART SM00220 10 270 5.1E-62 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 PIRSF PIRSF000654 7 278 1.4E-41 T 12-10-2018 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 PIRSF PIRSF000654 501 619 4000.0 T 12-10-2018 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Pfam PF03793 PASTA domain 437 498 2.3E-12 T 12-10-2018 IPR005543 PASTA domain CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Pfam PF03793 PASTA domain 369 431 5.9E-15 T 12-10-2018 IPR005543 PASTA domain CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Gene3D G3DSA:3.30.200.20 1 89 4.4E-26 T 12-10-2018 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Gene3D G3DSA:1.10.510.10 91 281 2.3E-53 T 12-10-2018 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Pfam PF00069 Protein kinase domain 10 261 2.0E-54 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 SUPERFAMILY SSF54184 368 430 6.67E-6 T 12-10-2018 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 SUPERFAMILY SSF56112 7 268 1.6E-78 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Gene3D G3DSA:3.30.10.20 434 501 3.2E-16 T 12-10-2018 CLSA_c13720 6ce73d2f11e769573d88ba159d0a87ee 621 Gene3D G3DSA:3.30.10.20 364 433 9.3E-17 T 12-10-2018 CLSA_c34760 72fd4166e7bf8ee75f6f7c69bf02bd39 184 Gene3D G3DSA:1.10.10.60 1 49 1.1E-13 T 12-10-2018 CLSA_c34760 72fd4166e7bf8ee75f6f7c69bf02bd39 184 SUPERFAMILY SSF46689 6 72 1.15E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c34760 72fd4166e7bf8ee75f6f7c69bf02bd39 184 SUPERFAMILY SSF48498 77 183 1.11E-17 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c34760 72fd4166e7bf8ee75f6f7c69bf02bd39 184 Gene3D G3DSA:1.10.357.10 51 184 3.3E-18 T 12-10-2018 CLSA_c34760 72fd4166e7bf8ee75f6f7c69bf02bd39 184 Pfam PF13305 WHG domain 87 161 4.4E-9 T 12-10-2018 IPR025996 WHG domain CLSA_c05600 2283a9ccb3e9100565a33763a5dc4fda 208 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 197 23.537 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 CLSA_c05600 2283a9ccb3e9100565a33763a5dc4fda 208 PIRSF PIRSF006102 1 206 1.4E-66 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CLSA_c05600 2283a9ccb3e9100565a33763a5dc4fda 208 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 187 2.4E-57 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 CLSA_c20050 e6683daa59022db694caf236484505da 683 Gene3D G3DSA:3.30.70.1110 167 258 5.0E-9 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CLSA_c20050 e6683daa59022db694caf236484505da 683 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 303 362 1.2E-5 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c20050 e6683daa59022db694caf236484505da 683 Pfam PF01627 Hpt domain 9 89 5.1E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c20050 e6683daa59022db694caf236484505da 683 Gene3D G3DSA:3.30.565.10 364 547 2.5E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20050 e6683daa59022db694caf236484505da 683 Pfam PF07194 P2 response regulator binding domain 171 256 2.8E-14 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLSA_c20050 e6683daa59022db694caf236484505da 683 SUPERFAMILY SSF47384 302 364 1.69E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20050 e6683daa59022db694caf236484505da 683 Gene3D G3DSA:1.10.287.560 302 363 2.1E-7 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CLSA_c20050 e6683daa59022db694caf236484505da 683 Gene3D G3DSA:1.20.120.160 1 143 9.7E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20050 e6683daa59022db694caf236484505da 683 Pfam PF01584 CheW-like domain 557 682 2.4E-19 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20050 e6683daa59022db694caf236484505da 683 Gene3D G3DSA:2.40.50.180 572 636 2.2E-29 T 12-10-2018 CLSA_c20050 e6683daa59022db694caf236484505da 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20050 e6683daa59022db694caf236484505da 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20050 e6683daa59022db694caf236484505da 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20050 e6683daa59022db694caf236484505da 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 503 1.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20050 e6683daa59022db694caf236484505da 683 SUPERFAMILY SSF47226 3 124 5.23E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c20050 e6683daa59022db694caf236484505da 683 SUPERFAMILY SSF55052 167 254 3.4E-9 T 12-10-2018 IPR035891 CheY-binding domain of CheA CLSA_c20050 e6683daa59022db694caf236484505da 683 SMART SM01231 301 363 2.7E-7 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c20050 e6683daa59022db694caf236484505da 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 547 2.9E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20050 e6683daa59022db694caf236484505da 683 SUPERFAMILY SSF50341 549 681 1.96E-22 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20050 e6683daa59022db694caf236484505da 683 Gene3D G3DSA:2.30.30.40 549 677 2.2E-29 T 12-10-2018 CLSA_c20050 e6683daa59022db694caf236484505da 683 SMART SM00387 408 549 2.2E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20050 e6683daa59022db694caf236484505da 683 SMART SM00260 541 681 2.4E-18 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20050 e6683daa59022db694caf236484505da 683 SMART SM00073 1 98 8.5E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c20050 e6683daa59022db694caf236484505da 683 SUPERFAMILY SSF55874 365 546 5.76E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 4 465 1.1E-198 T 12-10-2018 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 Pfam PF00232 Glycosyl hydrolase family 1 2 466 9.2E-164 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 Gene3D G3DSA:3.20.20.80 1 468 2.5E-167 T 12-10-2018 CLSA_c41080 2f43fba80f1e445ba7b5986737a67f30 475 SUPERFAMILY SSF51445 2 465 2.64E-163 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c04660 a00108e23db878e22b9fa9750009b6cb 459 PIRSF PIRSF004919 1 459 4.5E-126 T 12-10-2018 IPR025502 TldD CLSA_c04660 a00108e23db878e22b9fa9750009b6cb 459 SUPERFAMILY SSF111283 2 459 1.44E-120 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 CLSA_c04660 a00108e23db878e22b9fa9750009b6cb 459 Gene3D G3DSA:3.30.2290.10 2 221 7.3E-25 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal CLSA_c04660 a00108e23db878e22b9fa9750009b6cb 459 Pfam PF01523 Putative modulator of DNA gyrase 21 313 1.4E-68 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 317 9.0E-55 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 157 1.1E-50 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PIRSF PIRSF000114 1 329 3.5E-110 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 SUPERFAMILY SSF48179 176 328 3.23E-57 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 1.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 1.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 1.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 1.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 SUPERFAMILY SSF51735 3 175 2.1E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 Gene3D G3DSA:3.40.50.720 1 184 4.7E-61 T 12-10-2018 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 Gene3D G3DSA:1.10.1040.10 186 330 8.1E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLSA_c13560 efb1c7d9fd17626680357322b376b3f7 330 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 319 35.041 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 SMART SM00278 116 135 0.91 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 SMART SM00278 83 102 1900.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 SMART SM00278 180 199 88.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Gene3D G3DSA:1.10.150.20 74 136 3.9E-11 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Pfam PF14490 Helix-hairpin-helix containing domain 138 228 1.1E-28 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Gene3D G3DSA:3.40.50.300 480 721 2.1E-148 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Gene3D G3DSA:3.40.50.300 302 727 2.1E-148 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 SUPERFAMILY SSF47781 79 135 2.97E-10 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Pfam PF14520 Helix-hairpin-helix domain 88 134 7.0E-7 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 1 734 27.801 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 SMART SM00382 332 450 6.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 SUPERFAMILY SSF52540 316 712 6.96E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Gene3D G3DSA:2.30.30.940 570 658 2.1E-148 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Gene3D G3DSA:1.10.10.2220 180 271 6.4E-16 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Pfam PF13604 AAA domain 319 501 1.8E-46 T 12-10-2018 CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 Pfam PF13538 UvrD-like helicase C-terminal domain 658 705 3.2E-17 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain CLSA_c05330 c54949bd24ef92f9a87d1484a40b47e1 742 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 5 731 2.0E-199 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 SUPERFAMILY SSF57802 2 34 4.16E-11 T 12-10-2018 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 Pfam PF01880 Desulfoferrodoxin 40 120 8.6E-22 T 12-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 4 34 2.7E-14 T 12-10-2018 IPR004462 Desulforodoxin domain GO:0005506 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 38 121 8.5E-23 T 12-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 5 31 3.7E-13 T 12-10-2018 IPR004462 Desulforodoxin domain GO:0005506 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 Gene3D G3DSA:2.20.28.100 1 35 3.4E-14 T 12-10-2018 IPR038094 Desulforodoxin domain superfamily CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 Gene3D G3DSA:2.60.40.730 37 122 6.9E-30 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 TIGRFAM TIGR00320 dfx_rbo: desulfoferrodoxin 3 121 1.1E-47 T 12-10-2018 IPR004793 Desulfoferrodoxin GO:0005506|GO:0019430 CLSA_c38480 de1929418569d8cdc0b7f9483da532c8 122 SUPERFAMILY SSF49367 36 121 1.27E-32 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 CLSA_c21900 c7095f9ff48716ca5b9ab6c3d63321a9 320 Pfam PF13407 Periplasmic binding protein domain 37 293 7.2E-57 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c21900 c7095f9ff48716ca5b9ab6c3d63321a9 320 Gene3D G3DSA:3.40.50.2300 37 303 1.0E-85 T 12-10-2018 CLSA_c21900 c7095f9ff48716ca5b9ab6c3d63321a9 320 SUPERFAMILY SSF53822 33 314 1.52E-78 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c21900 c7095f9ff48716ca5b9ab6c3d63321a9 320 Gene3D G3DSA:3.40.50.2300 139 311 1.0E-85 T 12-10-2018 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 Pfam PF13393 Histidyl-tRNA synthetase 10 308 4.1E-51 T 12-10-2018 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 Gene3D G3DSA:3.30.930.10 3 320 4.1E-120 T 12-10-2018 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 PIRSF PIRSF001549 1 416 9.2E-127 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 Pfam PF03129 Anticodon binding domain 337 412 3.1E-11 T 12-10-2018 IPR004154 Anticodon-binding CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 405 1.1E-155 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 Gene3D G3DSA:3.40.50.800 321 412 1.3E-21 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 SUPERFAMILY SSF55681 6 314 6.13E-101 T 12-10-2018 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 415 33.421 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CLSA_c28650 448307eadbfa8de1cfc61743a59ed6b2 417 SUPERFAMILY SSF52954 325 412 8.51E-20 T 12-10-2018 CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 Gene3D G3DSA:1.20.1250.20 238 440 3.3E-52 T 12-10-2018 CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 Pfam PF07690 Major Facilitator Superfamily 35 394 5.4E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 PIRSF PIRSF002808 6 442 6.6E-151 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 ProSitePatterns PS00942 glpT family of transporters signature. 149 165 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 SUPERFAMILY SSF103473 12 431 1.29E-79 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 413 2.1E-139 T 12-10-2018 CLSA_c28270 b6e65cd9cc2f4a2f5af3d957c453aae7 442 Gene3D G3DSA:1.20.1250.20 19 222 1.9E-51 T 12-10-2018 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 SUPERFAMILY SSF46894 127 227 3.97E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 Pfam PF00072 Response regulator receiver domain 8 117 8.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.4E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 SMART SM00862 151 225 2.9E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 Gene3D G3DSA:3.40.50.2300 2 132 1.8E-37 T 12-10-2018 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 SMART SM00448 6 116 1.8E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 SUPERFAMILY SSF52172 6 125 9.96E-42 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c01080 5150f7777c6c337cef42bafb9a707dff 228 Gene3D G3DSA:1.10.10.10 133 228 1.4E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 Gene3D G3DSA:3.40.470.10 1 225 9.8E-101 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 SMART SM00986 50 210 2.2E-39 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 1.1E-82 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 5.3E-25 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 41.542 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 SUPERFAMILY SSF52141 4 222 2.62E-95 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c43400 a7852c15d30ec4f35b2483f675fa02fc 225 SMART SM00987 50 210 2.2E-39 T 12-10-2018 CLSA_c12890 095405b859766ae5bba9e1d791c55d61 140 SUPERFAMILY SSF141322 83 139 9.42E-10 T 12-10-2018 CLSA_c12890 095405b859766ae5bba9e1d791c55d61 140 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 139 5.0E-19 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain CLSA_c12890 095405b859766ae5bba9e1d791c55d61 140 Gene3D G3DSA:2.40.50.140 70 140 4.6E-13 T 12-10-2018 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 PIRSF PIRSF003095 1 427 8.5E-122 T 12-10-2018 IPR005215 Trigger factor GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.6E-43 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 SUPERFAMILY SSF102735 1 132 1.29E-39 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 2.2E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Hamap MF_00303 Trigger factor [tig]. 1 427 22.05 T 12-10-2018 IPR005215 Trigger factor GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 TIGRFAM TIGR00115 tig: trigger factor 13 422 2.4E-133 T 12-10-2018 IPR005215 Trigger factor GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 SUPERFAMILY SSF54534 89 243 3.93E-33 T 12-10-2018 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Gene3D G3DSA:1.10.3120.10 114 427 9.1E-86 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Gene3D G3DSA:3.10.50.40 151 248 9.1E-86 T 12-10-2018 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Gene3D G3DSA:3.30.70.1050 1 113 1.7E-31 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 424 8.9E-38 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CLSA_c31240 88dceae072d6791c74323962e5d5e0b9 427 SUPERFAMILY SSF109998 250 427 1.7E-37 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily CLSA_c27300 d591fd152b52fafbe3d94aeb1e47ea93 326 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 12 326 21.748 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c27300 d591fd152b52fafbe3d94aeb1e47ea93 326 Pfam PF00953 Glycosyl transferase family 4 87 253 1.0E-36 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CLSA_c27300 d591fd152b52fafbe3d94aeb1e47ea93 326 ProSitePatterns PS01348 MraY family signature 2. 173 184 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c27300 d591fd152b52fafbe3d94aeb1e47ea93 326 ProSitePatterns PS01347 MraY family signature 1. 55 67 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c27300 d591fd152b52fafbe3d94aeb1e47ea93 326 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 55 67 1.6E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c27300 d591fd152b52fafbe3d94aeb1e47ea93 326 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 24 325 4.1E-97 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 163 1.4E-8 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 SUPERFAMILY SSF51735 4 185 1.97E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 251 268 1.4E-8 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.4E-8 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 180 204 1.4E-8 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 140 160 1.4E-8 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 187 335 6.7E-21 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 Gene3D G3DSA:3.40.50.720 3 186 2.0E-32 T 12-10-2018 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 SUPERFAMILY SSF48179 187 342 4.76E-22 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 Gene3D G3DSA:1.10.1040.10 187 342 1.9E-26 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLSA_c18100 72e123adf656c2c362364c4d74eb03aa 347 PIRSF PIRSF000114 1 346 1.5E-39 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CLSA_c41700 89770901ce43d8d87aa2a0b1734d3191 836 Gene3D G3DSA:3.40.50.2000 72 169 4.0E-7 T 12-10-2018 CLSA_c41700 89770901ce43d8d87aa2a0b1734d3191 836 Pfam PF00534 Glycosyl transferases group 1 161 285 6.3E-13 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c41700 89770901ce43d8d87aa2a0b1734d3191 836 Gene3D G3DSA:3.40.50.2000 623 806 5.1E-12 T 12-10-2018 CLSA_c41700 89770901ce43d8d87aa2a0b1734d3191 836 Gene3D G3DSA:3.40.50.2000 170 323 1.0E-15 T 12-10-2018 CLSA_c41700 89770901ce43d8d87aa2a0b1734d3191 836 SUPERFAMILY SSF53756 613 826 4.34E-11 T 12-10-2018 CLSA_c41700 89770901ce43d8d87aa2a0b1734d3191 836 SUPERFAMILY SSF53756 94 330 8.9E-31 T 12-10-2018 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 1.2E-44 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 521 2.1E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 SUPERFAMILY SSF58104 232 569 8.37E-59 T 12-10-2018 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 Gene3D G3DSA:1.10.287.950 256 569 2.0E-59 T 12-10-2018 CLSA_c19370 412d6a49e97127a65d724bc80994a312 570 SMART SM00283 293 569 4.8E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c04160 84a0325b15ee23f3ebaf0000e676ca44 386 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 301 336 2.5E-8 T 12-10-2018 IPR006343 DnaD domain CLSA_c04160 84a0325b15ee23f3ebaf0000e676ca44 386 Pfam PF07261 Replication initiation and membrane attachment 303 335 2.4E-6 T 12-10-2018 IPR006343 DnaD domain CLSA_c04160 84a0325b15ee23f3ebaf0000e676ca44 386 SUPERFAMILY SSF158499 277 336 9.15E-10 T 12-10-2018 IPR034829 DnaD-like domain superfamily CLSA_c04160 84a0325b15ee23f3ebaf0000e676ca44 386 Gene3D G3DSA:1.10.10.630 294 342 6.8E-7 T 12-10-2018 IPR034829 DnaD-like domain superfamily CLSA_c04160 84a0325b15ee23f3ebaf0000e676ca44 386 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 7 127 1.5E-39 T 12-10-2018 IPR010056 Phage replisome organiser, N-terminal domain CLSA_c04160 84a0325b15ee23f3ebaf0000e676ca44 386 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 7 127 4.4E-50 T 12-10-2018 IPR010056 Phage replisome organiser, N-terminal domain CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 SUPERFAMILY SSF57783 613 647 1.02E-6 T 12-10-2018 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Pfam PF01751 Toprim domain 5 113 1.2E-29 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Gene3D G3DSA:3.40.50.140 1 134 3.2E-54 T 12-10-2018 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 609 2.6E-248 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Gene3D G3DSA:1.10.460.10 135 548 1.1E-162 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Gene3D G3DSA:1.10.290.10 250 385 1.1E-162 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 575 610 1.1E-13 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 651 1.6E-13 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 655 691 5.4E-7 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 SUPERFAMILY SSF57783 571 611 2.55E-13 T 12-10-2018 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 SMART SM00437 242 508 2.1E-119 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 SMART SM00436 104 192 1.9E-47 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Gene3D G3DSA:3.30.65.10 562 615 1.4E-15 T 12-10-2018 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Gene3D G3DSA:2.70.20.10 184 455 1.1E-162 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 SUPERFAMILY SSF56712 3 559 9.81E-196 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Pfam PF01131 DNA topoisomerase 128 545 2.7E-133 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 9.9E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 9.9E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 9.9E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 9.9E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 471 485 9.9E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 SMART SM00493 3 103 3.3E-31 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c14080 41a4e284c3bc33c64a3d8b9174f50d33 700 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 679 54.685 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CLSA_c20810 3d9bc575be690e6d35b81010b2eca5b5 94 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 17 94 1.1E-15 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CLSA_c20810 3d9bc575be690e6d35b81010b2eca5b5 94 Gene3D G3DSA:3.30.750.24 2 94 8.4E-26 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c20810 3d9bc575be690e6d35b81010b2eca5b5 94 Pfam PF01740 STAS domain 10 93 1.3E-12 T 12-10-2018 IPR002645 STAS domain CLSA_c20810 3d9bc575be690e6d35b81010b2eca5b5 94 SUPERFAMILY SSF52091 7 94 5.3E-21 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 Pfam PF00366 Ribosomal protein S17 11 78 2.2E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 4.7E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 4.7E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 4.7E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 3.0E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 SUPERFAMILY SSF50249 7 83 2.96E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.285 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 1.6E-35 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02100 2007679d30a8799af1c11bf1d8517581 84 Gene3D G3DSA:2.40.50.140 5 84 1.6E-34 T 12-10-2018 CLSA_c40170 c80e07b29a007bb3716c418e3f8ba58d 62 Pfam PF14056 Domain of unknown function (DUF4250) 9 61 1.5E-25 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 227 43.254 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 Gene3D G3DSA:3.40.50.790 65 157 1.6E-86 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 Gene3D G3DSA:3.30.190.20 18 222 1.6E-86 T 12-10-2018 CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 225 9.5E-101 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 Pfam PF00687 Ribosomal protein L1p/L10e family 28 218 1.4E-58 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 SUPERFAMILY SSF56808 3 224 6.28E-85 T 12-10-2018 IPR023674 Ribosomal protein L1-like CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 PIRSF PIRSF002155 1 225 2.6E-79 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c01910 5196ee32e2bd24524f7dd965c46d0904 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 137 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c38020 f82c7d662457b5c5fc1ae9f0ae24dcfc 319 SUPERFAMILY SSF58104 31 314 4.19E-55 T 12-10-2018 CLSA_c38020 f82c7d662457b5c5fc1ae9f0ae24dcfc 319 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 105 282 3.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c38020 f82c7d662457b5c5fc1ae9f0ae24dcfc 319 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 318 4.0E-4 T 12-10-2018 CLSA_c38020 f82c7d662457b5c5fc1ae9f0ae24dcfc 319 SMART SM00283 64 312 1.6E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c38020 f82c7d662457b5c5fc1ae9f0ae24dcfc 319 Gene3D G3DSA:1.10.287.950 6 319 8.8E-54 T 12-10-2018 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 PIRSF PIRSF016578 3 379 7.0E-20 T 12-10-2018 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 4.8E-53 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 Gene3D G3DSA:2.40.110.10 121 235 4.5E-44 T 12-10-2018 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.2E-35 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 SUPERFAMILY SSF47203 227 379 1.34E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 Gene3D G3DSA:1.20.140.10 236 379 8.3E-55 T 12-10-2018 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.1E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 SUPERFAMILY SSF56645 1 242 6.68E-88 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CLSA_c03570 625adac7dec8f7a771ab026a39e02214 379 Gene3D G3DSA:1.10.540.10 1 120 4.7E-41 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CLSA_c14790 1b34f95ec98cc3b77adb9a181d516c8a 207 SUPERFAMILY SSF69360 27 138 6.28E-29 T 12-10-2018 CLSA_c14790 1b34f95ec98cc3b77adb9a181d516c8a 207 Pfam PF01473 Putative cell wall binding repeat 49 66 5.0E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c14790 1b34f95ec98cc3b77adb9a181d516c8a 207 Pfam PF01473 Putative cell wall binding repeat 68 86 3.5E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c14790 1b34f95ec98cc3b77adb9a181d516c8a 207 Pfam PF01473 Putative cell wall binding repeat 88 106 9.4E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c14790 1b34f95ec98cc3b77adb9a181d516c8a 207 Gene3D G3DSA:2.10.270.10 46 125 7.3E-27 T 12-10-2018 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 23 456 1.7E-131 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 SMART SM00729 165 383 1.2E-52 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 Gene3D G3DSA:3.80.30.20 162 396 4.3E-87 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 Gene3D G3DSA:3.40.50.12160 22 155 7.5E-41 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 23 456 3.7E-155 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 Pfam PF00919 Uncharacterized protein family UPF0004 23 121 3.3E-26 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 SUPERFAMILY SSF102114 164 388 2.09E-55 T 12-10-2018 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 Pfam PF04055 Radical SAM superfamily 171 341 1.1E-25 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 169 189 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 Gene3D G3DSA:2.40.50.140 398 463 3.3E-18 T 12-10-2018 CLSA_c14530 03bd7e81fdf0f0f3adec473260aaae5d 464 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 22 458 63.817 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CLSA_c15040 206d942e987b397d3415653335164c42 551 Gene3D G3DSA:2.60.40.1120 290 374 1.1E-24 T 12-10-2018 CLSA_c15040 206d942e987b397d3415653335164c42 551 Pfam PF14683 Polysaccharide lyase family 4, domain III 383 549 6.2E-32 T 12-10-2018 IPR029411 Rhamnogalacturonan lyase, domain III MetaCyc: PWY-6769|MetaCyc: PWY-6771 CLSA_c15040 206d942e987b397d3415653335164c42 551 Pfam PF09284 Rhamnogalacturonan lyase B, N-terminal 41 288 9.8E-87 T 12-10-2018 IPR015364 Rhamnogalacturonase B, N-terminal GO:0005975|GO:0016837|GO:0030246 MetaCyc: PWY-6769|MetaCyc: PWY-6771 CLSA_c15040 206d942e987b397d3415653335164c42 551 SUPERFAMILY SSF74650 39 285 1.69E-52 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CLSA_c15040 206d942e987b397d3415653335164c42 551 Gene3D G3DSA:2.70.98.10 38 289 1.6E-81 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CLSA_c15040 206d942e987b397d3415653335164c42 551 Gene3D G3DSA:2.60.120.260 379 550 7.6E-62 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c15040 206d942e987b397d3415653335164c42 551 SUPERFAMILY SSF49785 381 549 1.7E-39 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c15040 206d942e987b397d3415653335164c42 551 SUPERFAMILY SSF49452 283 370 5.89E-7 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 CLSA_c15040 206d942e987b397d3415653335164c42 551 Pfam PF14686 Polysaccharide lyase family 4, domain II 308 368 1.5E-15 T 12-10-2018 IPR029413 Rhamnogalacturonan lyase, domain II MetaCyc: PWY-6769|MetaCyc: PWY-6771 CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 Pfam PF00005 ABC transporter 23 173 1.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 Gene3D G3DSA:3.40.50.300 298 559 2.0E-65 T 12-10-2018 CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 Gene3D G3DSA:3.40.50.300 2 253 1.4E-67 T 12-10-2018 CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 SUPERFAMILY SSF52540 297 529 9.7E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 SMART SM00382 327 511 1.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 SMART SM00382 32 224 3.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 SUPERFAMILY SSF52540 3 235 3.38E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 Pfam PF00005 ABC transporter 318 464 1.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 Pfam PF12558 ATP-binding cassette cobalt transporter 237 309 2.8E-24 T 12-10-2018 IPR022216 Putative ABC cobalt transporter CLSA_c32070 6cd01b9afcbc6bc0f062d484539ad976 568 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c14070 ebbdd6cf7926051d25e06c0762fbd8a4 351 Pfam PF02481 DNA recombination-mediator protein A 69 273 4.0E-76 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CLSA_c14070 ebbdd6cf7926051d25e06c0762fbd8a4 351 SUPERFAMILY SSF102405 76 278 1.53E-38 T 12-10-2018 CLSA_c14070 ebbdd6cf7926051d25e06c0762fbd8a4 351 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 278 8.9E-72 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CLSA_c14070 ebbdd6cf7926051d25e06c0762fbd8a4 351 Gene3D G3DSA:3.40.50.450 3 288 2.3E-88 T 12-10-2018 CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 Gene3D G3DSA:1.10.10.10 22 88 1.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 SUPERFAMILY SSF46785 21 81 6.96E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 SMART SM00529 43 140 1.9E-13 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 21 77 5.4E-15 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 82 142 4.1E-10 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 Gene3D G3DSA:1.10.60.10 93 156 1.7E-10 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 CLSA_c38340 c4013c12ca40edd6354bff971d6631c1 156 SUPERFAMILY SSF47979 82 150 1.96E-10 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 Pfam PF01037 Lrp/AsnC ligand binding domain 67 134 1.3E-11 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 4.0E-16 T 12-10-2018 CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.3E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 SUPERFAMILY SSF54909 62 137 1.88E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 Gene3D G3DSA:1.10.10.10 1 51 5.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 Gene3D G3DSA:3.30.70.920 52 140 4.1E-22 T 12-10-2018 CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 SUPERFAMILY SSF46785 1 61 4.87E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c15290 9dcc028e99c7411a30cb67d16d5b463b 150 SMART SM00344 1 107 3.4E-35 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLSA_c02510 02cce81cabf80a72394e8b5ce7b9a620 202 Pfam PF07486 Cell Wall Hydrolase 98 198 6.0E-30 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLSA_c02510 02cce81cabf80a72394e8b5ce7b9a620 202 Gene3D G3DSA:1.10.10.2520 82 161 3.8E-29 T 12-10-2018 CLSA_c02510 02cce81cabf80a72394e8b5ce7b9a620 202 Gene3D G3DSA:2.40.10.420 162 199 2.6E-11 T 12-10-2018 CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 Pfam PF00733 Asparagine synthase 243 605 5.2E-83 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 SUPERFAMILY SSF52402 222 570 9.31E-68 T 12-10-2018 CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 SUPERFAMILY SSF56235 1 227 1.54E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 PIRSF PIRSF001589 1 612 3.3E-137 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 533 3.8E-155 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 Gene3D G3DSA:3.60.20.10 2 185 8.2E-58 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c12790 96046e82e7508f9fcfe5ce234c50a8e2 614 Pfam PF13537 Glutamine amidotransferase domain 48 169 2.8E-40 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 Gene3D G3DSA:3.40.50.2300 6 129 1.7E-35 T 12-10-2018 CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 222 2.0E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 SMART SM00862 150 222 5.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 SUPERFAMILY SSF52172 8 131 7.97E-39 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 Pfam PF00072 Response regulator receiver domain 11 119 4.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 SMART SM00448 9 118 5.3E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 SUPERFAMILY SSF46894 123 223 7.27E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c36310 da92461b72d64f84640ee3d9b6b11908 224 Gene3D G3DSA:1.10.10.10 130 224 3.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 SUPERFAMILY SSF100920 402 527 7.85E-20 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 SUPERFAMILY SSF53067 9 169 7.99E-42 T 12-10-2018 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 Gene3D G3DSA:3.90.640.10 215 308 2.7E-111 T 12-10-2018 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 60 68 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 10 23 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 37 49 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 125 145 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 493 509 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 184 194 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.0E-26 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 SUPERFAMILY SSF53067 173 381 1.44E-47 T 12-10-2018 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 Pfam PF00012 Hsp70 protein 11 526 3.3E-101 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 Gene3D G3DSA:3.30.420.40 171 366 2.7E-111 T 12-10-2018 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 Gene3D G3DSA:3.30.420.40 12 376 2.7E-111 T 12-10-2018 CLSA_c06660 02a919ee7903bddde8513e4987261b12 530 Gene3D G3DSA:2.60.34.10 402 530 1.1E-27 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c31990 a9fbdf4abb03b1c5c4f7b31ff1f24e0c 314 Pfam PF03186 CobD/Cbib protein 4 291 1.9E-102 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CLSA_c31990 a9fbdf4abb03b1c5c4f7b31ff1f24e0c 314 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 313 89.586 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CLSA_c31990 a9fbdf4abb03b1c5c4f7b31ff1f24e0c 314 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 297 2.6E-74 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CLSA_c31360 4606c882e5f171970d28b3bab7ba7ca9 381 PIRSF PIRSF001549 1 373 6.3E-73 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CLSA_c31360 4606c882e5f171970d28b3bab7ba7ca9 381 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 320 2.5E-96 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CLSA_c31360 4606c882e5f171970d28b3bab7ba7ca9 381 Gene3D G3DSA:3.30.930.10 2 324 9.4E-88 T 12-10-2018 CLSA_c31360 4606c882e5f171970d28b3bab7ba7ca9 381 SUPERFAMILY SSF55681 7 321 5.38E-60 T 12-10-2018 CLSA_c31360 4606c882e5f171970d28b3bab7ba7ca9 381 Pfam PF13393 Histidyl-tRNA synthetase 10 319 1.6E-73 T 12-10-2018 CLSA_c31360 4606c882e5f171970d28b3bab7ba7ca9 381 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 17 376 29.08 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 Pfam PF13537 Glutamine amidotransferase domain 56 166 5.9E-20 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 Gene3D G3DSA:3.60.20.10 7 224 1.3E-29 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 PIRSF PIRSF001589 1 632 5.8E-54 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 Pfam PF00733 Asparagine synthase 243 609 4.4E-23 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 SUPERFAMILY SSF56235 24 223 2.65E-26 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 SUPERFAMILY SSF52402 220 611 1.34E-27 T 12-10-2018 CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 Gene3D G3DSA:3.40.50.620 231 392 8.5E-19 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c28400 878b14dd74d55a0fecb6db5f3ea2abd5 642 Gene3D G3DSA:3.40.50.620 478 620 4.1E-13 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c06330 a9e09e1c298c5de94745554661d6bc4f 227 SUPERFAMILY SSF52540 3 223 2.06E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06330 a9e09e1c298c5de94745554661d6bc4f 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c06330 a9e09e1c298c5de94745554661d6bc4f 227 SMART SM00382 32 218 9.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c06330 a9e09e1c298c5de94745554661d6bc4f 227 Gene3D G3DSA:3.40.50.300 1 227 6.2E-62 T 12-10-2018 CLSA_c06330 a9e09e1c298c5de94745554661d6bc4f 227 Pfam PF00005 ABC transporter 23 169 4.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c27290 e00a6de7e7e8b455215d627487309b25 378 Pfam PF01098 Cell cycle protein 19 368 2.4E-110 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c27290 e00a6de7e7e8b455215d627487309b25 378 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 16 368 9.7E-115 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c27290 e00a6de7e7e8b455215d627487309b25 378 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 16 367 1.7E-146 T 12-10-2018 IPR013438 Sporulation stage V, protein E CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 SUPERFAMILY SSF55945 10 113 3.77E-21 T 12-10-2018 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 17 119 9.3E-23 T 12-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 Gene3D G3DSA:1.10.1670.50 251 311 2.0E-25 T 12-10-2018 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 SMART SM00478 124 302 3.7E-13 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 SUPERFAMILY SSF48150 114 302 2.2E-35 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 Gene3D G3DSA:3.30.310.260 1 113 2.5E-38 T 12-10-2018 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 Gene3D G3DSA:1.10.340.30 114 250 4.2E-35 T 12-10-2018 CLSA_c03620 a33c1fd4c6d647f6155f07558a210a2e 311 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 120 273 3.0E-10 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 Gene3D G3DSA:3.50.30.10 4 231 1.4E-77 T 12-10-2018 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 SUPERFAMILY SSF51621 247 536 3.14E-111 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 445 463 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 Pfam PF05524 PEP-utilising enzyme, N-terminal 3 124 1.5E-29 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 Gene3D G3DSA:3.20.20.60 232 539 4.0E-122 T 12-10-2018 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 PIRSF PIRSF000732 1 539 9.3E-216 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 Pfam PF00391 PEP-utilising enzyme, mobile domain 151 223 2.1E-25 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 SUPERFAMILY SSF47831 24 141 4.58E-31 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 536 1.6E-216 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 249 537 5.8E-125 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 1.9E-31 T 12-10-2018 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 291 310 1.9E-31 T 12-10-2018 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 462 477 1.9E-31 T 12-10-2018 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 498 510 1.9E-31 T 12-10-2018 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 Gene3D G3DSA:1.10.274.10 21 144 1.4E-77 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 182 193 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CLSA_c02480 c850ff3c04936049f00a45b742931e01 539 SUPERFAMILY SSF52009 123 244 4.06E-38 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CLSA_c00030 0c20d7d0839308877192ecc982a767b4 68 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 3 62 4.3E-25 T 12-10-2018 IPR014330 RNA-binding S4-related,YaaA CLSA_c00030 0c20d7d0839308877192ecc982a767b4 68 Gene3D G3DSA:3.10.290.10 1 68 1.6E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c00030 0c20d7d0839308877192ecc982a767b4 68 Pfam PF13275 S4 domain 4 67 1.5E-25 T 12-10-2018 CLSA_c00030 0c20d7d0839308877192ecc982a767b4 68 SUPERFAMILY SSF55174 2 65 2.75E-19 T 12-10-2018 CLSA_c00030 0c20d7d0839308877192ecc982a767b4 68 SMART SM00363 11 67 1.2E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c43350 290d657988e027051a6d0f2f4ef5d818 423 SUPERFAMILY SSF54001 308 422 4.41E-42 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c43350 290d657988e027051a6d0f2f4ef5d818 423 Gene3D G3DSA:1.20.5.340 10 107 5.3E-5 T 12-10-2018 CLSA_c43350 290d657988e027051a6d0f2f4ef5d818 423 Pfam PF00877 NlpC/P60 family 326 421 1.1E-26 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CLSA_c43350 290d657988e027051a6d0f2f4ef5d818 423 Gene3D G3DSA:3.90.1720.10 238 422 1.6E-53 T 12-10-2018 CLSA_c28020 aa72b894974d5851282e7043e4d83c97 599 Gene3D G3DSA:3.40.50.300 44 277 3.0E-24 T 12-10-2018 CLSA_c28020 aa72b894974d5851282e7043e4d83c97 599 Pfam PF00350 Dynamin family 44 185 3.1E-17 T 12-10-2018 IPR022812 Dynamin superfamily CLSA_c28020 aa72b894974d5851282e7043e4d83c97 599 SUPERFAMILY SSF52540 37 259 1.67E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10470 54cf5f6fe21005819627d890963648a0 122 Gene3D G3DSA:1.10.10.10 8 122 4.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10470 54cf5f6fe21005819627d890963648a0 122 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.1E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c10470 54cf5f6fe21005819627d890963648a0 122 SMART SM00345 15 74 1.1E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c10470 54cf5f6fe21005819627d890963648a0 122 SUPERFAMILY SSF46785 4 84 2.08E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 397 4.8E-20 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Pfam PF01225 Mur ligase family, catalytic domain 27 101 6.3E-11 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 448 4.4E-124 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 SUPERFAMILY SSF53623 107 317 2.49E-49 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 SUPERFAMILY SSF53244 320 448 1.57E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Gene3D G3DSA:3.40.1190.10 88 317 2.2E-65 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Gene3D G3DSA:3.40.1390.10 1 78 1.2E-19 T 12-10-2018 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Pfam PF08245 Mur ligase middle domain 112 296 7.4E-45 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Gene3D G3DSA:3.90.190.20 318 452 6.0E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 451 32.111 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c27310 d08d7df65ef1785f8b49979e2f9d30d9 452 SUPERFAMILY SSF63418 3 104 3.92E-22 T 12-10-2018 IPR035911 MurE/MurF, N-terminal CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 SMART SM00382 368 559 1.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 SUPERFAMILY SSF90123 6 319 2.88E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 Pfam PF00005 ABC transporter 360 508 5.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 Gene3D G3DSA:3.40.50.300 328 587 3.2E-83 T 12-10-2018 CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 Pfam PF00664 ABC transporter transmembrane region 23 293 1.6E-16 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 Gene3D G3DSA:1.20.1560.10 4 319 8.8E-32 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c18260 f0c76771144aa829c79633e489849fb5 589 SUPERFAMILY SSF52540 330 577 9.92E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c02630 4de7fd71aadee11892a64621e81689a9 103 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 9 95 5.3E-44 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD CLSA_c02630 4de7fd71aadee11892a64621e81689a9 103 SUPERFAMILY SSF48295 4 96 1.52E-31 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c02630 4de7fd71aadee11892a64621e81689a9 103 Pfam PF01371 Trp repressor protein 12 95 3.5E-32 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CLSA_c02630 4de7fd71aadee11892a64621e81689a9 103 PIRSF PIRSF012508 1 102 7.7E-49 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD CLSA_c02630 4de7fd71aadee11892a64621e81689a9 103 Gene3D G3DSA:1.10.1270.10 2 103 5.0E-38 T 12-10-2018 IPR038116 TrpR-like superfamily CLSA_c41840 70447590130232608ccbd3e4f68fa8f7 324 Gene3D G3DSA:3.20.20.190 100 220 5.2E-14 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CLSA_c41840 70447590130232608ccbd3e4f68fa8f7 324 Gene3D G3DSA:3.20.20.190 1 99 2.1E-38 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CLSA_c41840 70447590130232608ccbd3e4f68fa8f7 324 Gene3D G3DSA:3.20.20.190 231 320 1.3E-10 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CLSA_c41840 70447590130232608ccbd3e4f68fa8f7 324 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 306 1.7E-45 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CLSA_c41840 70447590130232608ccbd3e4f68fa8f7 324 SUPERFAMILY SSF51695 3 312 4.45E-62 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 209 317 1.1E-28 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 Gene3D G3DSA:3.40.50.2020 11 306 2.0E-128 T 12-10-2018 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 8 318 50.942 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 Gene3D G3DSA:3.40.50.2020 151 294 2.0E-128 T 12-10-2018 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 SMART SM01400 8 124 7.0E-83 T 12-10-2018 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 318 2.9E-125 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 SUPERFAMILY SSF53271 73 309 1.39E-66 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c01070 7b233cd8893a9ec7e8182290dee95a42 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 3.7E-52 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLSA_c24570 1355cd4f9ed919ece53488146c44ad9c 703 SUPERFAMILY SSF49785 560 681 5.83E-9 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c24570 1355cd4f9ed919ece53488146c44ad9c 703 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 177 454 6.5E-54 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 CLSA_c24570 1355cd4f9ed919ece53488146c44ad9c 703 Gene3D G3DSA:2.60.120.260 557 703 2.3E-35 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c38110 414e0fc6bd649f54176e2bb8a49ae0f7 258 Pfam PF01966 HD domain 36 150 1.4E-12 T 12-10-2018 IPR006674 HD domain CLSA_c38110 414e0fc6bd649f54176e2bb8a49ae0f7 258 Gene3D G3DSA:1.10.3210.10 8 186 2.5E-22 T 12-10-2018 CLSA_c38110 414e0fc6bd649f54176e2bb8a49ae0f7 258 TIGRFAM TIGR00277 HDIG: HDIG domain 36 106 4.8E-9 T 12-10-2018 IPR006675 HDIG domain CLSA_c38110 414e0fc6bd649f54176e2bb8a49ae0f7 258 SMART SM00471 30 161 0.0048 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c38110 414e0fc6bd649f54176e2bb8a49ae0f7 258 SUPERFAMILY SSF109604 30 168 1.04E-19 T 12-10-2018 CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 1.9E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 SUPERFAMILY SSF52172 2 180 2.05E-41 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 Gene3D G3DSA:3.40.50.2300 2 128 3.3E-38 T 12-10-2018 CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 Gene3D G3DSA:1.10.10.10 129 226 8.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 SMART SM00862 148 223 2.7E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 Pfam PF00072 Response regulator receiver domain 6 115 2.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c28920 36fbcc3bfab46b05dfafccba73187c3d 226 SMART SM00448 4 114 3.3E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c07640 977ae0a11fdf12332acc8399841d1c13 472 SUPERFAMILY SSF102114 46 384 2.49E-47 T 12-10-2018 CLSA_c07640 977ae0a11fdf12332acc8399841d1c13 472 Gene3D G3DSA:3.20.20.70 16 395 1.3E-115 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c07640 977ae0a11fdf12332acc8399841d1c13 472 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 275 380 3.6E-23 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c07640 977ae0a11fdf12332acc8399841d1c13 472 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 2 472 1.1E-283 T 12-10-2018 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM CLSA_c07640 977ae0a11fdf12332acc8399841d1c13 472 Pfam PF04055 Radical SAM superfamily 93 243 3.6E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c07640 977ae0a11fdf12332acc8399841d1c13 472 SMART SM00876 275 383 3.9E-27 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c45290 255123a39353bd33dc39646786e6438f 147 SUPERFAMILY SSF55653 57 145 5.49E-24 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CLSA_c45290 255123a39353bd33dc39646786e6438f 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 9.0E-24 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45290 255123a39353bd33dc39646786e6438f 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 25.68 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c45290 255123a39353bd33dc39646786e6438f 147 Gene3D G3DSA:3.10.430.100 61 147 4.6E-27 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CLSA_c45290 255123a39353bd33dc39646786e6438f 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45290 255123a39353bd33dc39646786e6438f 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.3E-41 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c45290 255123a39353bd33dc39646786e6438f 147 SUPERFAMILY SSF55658 1 56 7.67E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLSA_c45290 255123a39353bd33dc39646786e6438f 147 Gene3D G3DSA:3.40.5.10 1 60 5.4E-24 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45290 255123a39353bd33dc39646786e6438f 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 4.1E-26 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal CLSA_c34870 caadb681677f31c33ef78074a4d90e82 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 3.0E-17 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLSA_c34870 caadb681677f31c33ef78074a4d90e82 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 9.8E-34 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CLSA_c34870 caadb681677f31c33ef78074a4d90e82 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.61 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLSA_c34870 caadb681677f31c33ef78074a4d90e82 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 3.8E-37 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLSA_c34870 caadb681677f31c33ef78074a4d90e82 98 PIRSF PIRSF002736 1 97 4.1E-41 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLSA_c39710 4cab7ef3b91c8f76ca5aceb6ad3530e4 483 Gene3D G3DSA:1.20.1330.10 41 311 2.3E-36 T 12-10-2018 CLSA_c39710 4cab7ef3b91c8f76ca5aceb6ad3530e4 483 Pfam PF00700 Bacterial flagellin C-terminal helical region 400 482 3.4E-7 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLSA_c39710 4cab7ef3b91c8f76ca5aceb6ad3530e4 483 SUPERFAMILY SSF64518 1 482 1.12E-59 T 12-10-2018 CLSA_c39710 4cab7ef3b91c8f76ca5aceb6ad3530e4 483 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 7.7E-25 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLSA_c39710 4cab7ef3b91c8f76ca5aceb6ad3530e4 483 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 482 7.2E-68 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CLSA_c07480 16c81d48d172d1fba6a1b61d1a93387a 314 Gene3D G3DSA:3.40.50.2300 49 295 5.4E-74 T 12-10-2018 CLSA_c07480 16c81d48d172d1fba6a1b61d1a93387a 314 Gene3D G3DSA:3.40.50.2300 141 278 5.4E-74 T 12-10-2018 CLSA_c07480 16c81d48d172d1fba6a1b61d1a93387a 314 SUPERFAMILY SSF53822 37 312 7.74E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c07480 16c81d48d172d1fba6a1b61d1a93387a 314 Pfam PF13407 Periplasmic binding protein domain 40 295 1.0E-38 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00690 Adhesin family signature 187 208 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00690 Adhesin family signature 68 81 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00690 Adhesin family signature 240 258 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00690 Adhesin family signature 81 98 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00690 Adhesin family signature 37 55 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 Gene3D G3DSA:3.40.50.1980 26 189 1.7E-48 T 12-10-2018 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 295 1.5E-74 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00691 Adhesin B signature 81 100 1.0E-15 T 12-10-2018 IPR006129 Adhesin B GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00691 Adhesin B signature 275 293 1.0E-15 T 12-10-2018 IPR006129 Adhesin B GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00691 Adhesin B signature 213 231 1.0E-15 T 12-10-2018 IPR006129 Adhesin B GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00691 Adhesin B signature 37 58 1.0E-15 T 12-10-2018 IPR006129 Adhesin B GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 PRINTS PR00691 Adhesin B signature 62 80 1.0E-15 T 12-10-2018 IPR006129 Adhesin B GO:0007155 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 SUPERFAMILY SSF53807 34 298 1.91E-78 T 12-10-2018 CLSA_c05960 289abf5af90bb5d22eb3798096d2775f 304 Gene3D G3DSA:3.40.50.1980 190 304 3.4E-32 T 12-10-2018 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 Pfam PF01546 Peptidase family M20/M25/M40 73 481 1.6E-20 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 484 1.7E-190 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PIRSF PIRSF016599 1 485 2.3E-191 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 Gene3D G3DSA:3.40.630.10 373 485 5.5E-25 T 12-10-2018 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 SUPERFAMILY SSF55031 212 299 1.14E-5 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 Gene3D G3DSA:3.40.630.10 1 243 6.5E-63 T 12-10-2018 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 Pfam PF07687 Peptidase dimerisation domain 209 291 1.0E-9 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 SUPERFAMILY SSF53187 10 482 2.49E-59 T 12-10-2018 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 451 473 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 429 445 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 364 382 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c06070 1fa1a7d03617362459f7025685a17bb3 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 6.3E-61 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 PIRSF PIRSF000412 1 407 3.0E-173 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 411 53.559 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 Pfam PF00464 Serine hydroxymethyltransferase 7 382 1.8E-181 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 Gene3D G3DSA:3.40.640.10 35 285 1.0E-192 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 SUPERFAMILY SSF53383 2 410 6.05E-184 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 Gene3D G3DSA:3.90.1150.10 9 389 1.0E-192 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c27950 41980c9a555bc862a4a3fd9d3dea3790 411 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 SUPERFAMILY SSF52922 258 412 3.57E-49 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 424 608 2.2E-31 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Gene3D G3DSA:3.40.920.10 414 623 1.1E-90 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 246 2.6E-81 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 4 1167 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 268 370 6.7E-17 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Gene3D G3DSA:4.10.780.10 630 668 9.0E-6 T 12-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 SMART SM00890 620 679 1.8E-29 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 SUPERFAMILY SSF52518 3 257 9.61E-78 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Gene3D G3DSA:3.40.50.970 787 1169 2.9E-172 T 12-10-2018 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Pfam PF12838 4Fe-4S dicluster domain 688 758 2.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 SUPERFAMILY SSF54862 672 768 9.63E-18 T 12-10-2018 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Gene3D G3DSA:3.30.70.20 669 785 6.1E-37 T 12-10-2018 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Gene3D G3DSA:3.40.50.970 1 257 3.3E-110 T 12-10-2018 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 PIRSF PIRSF000159 1 1169 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1064 1.6E-8 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Pfam PF10371 Domain of unknown function 627 678 1.9E-23 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 SUPERFAMILY SSF52518 788 1168 1.15E-136 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 SUPERFAMILY SSF53323 415 666 1.28E-86 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 Gene3D G3DSA:3.40.50.920 258 413 6.8E-62 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c39900 44e17591843d04e8db14c81558c4de79 1169 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 746 757 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c13970 062b45a087631424f1c59139e73c07d8 81 Pfam PF00886 Ribosomal protein S16 9 67 2.8E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13970 062b45a087631424f1c59139e73c07d8 81 Gene3D G3DSA:3.30.1320.10 1 81 7.1E-36 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13970 062b45a087631424f1c59139e73c07d8 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.926 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13970 062b45a087631424f1c59139e73c07d8 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 1.4E-34 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13970 062b45a087631424f1c59139e73c07d8 81 SUPERFAMILY SSF54565 2 79 5.62E-33 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 Gene3D G3DSA:1.10.150.240 18 83 1.0E-57 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 189 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 181 1.4E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 Gene3D G3DSA:3.40.50.1000 6 188 1.0E-57 T 12-10-2018 IPR023214 HAD superfamily CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 3.6E-41 T 12-10-2018 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 185 6.7E-18 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c28210 26e8e7682b30d027ad55ade211b1b31c 218 SUPERFAMILY SSF56784 3 216 9.32E-56 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 SUPERFAMILY SSF50677 224 411 2.83E-53 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Gene3D G3DSA:1.10.730.10 597 752 9.5E-40 T 12-10-2018 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 414 604 1.1E-20 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 571 3.9E-253 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 3.8E-48 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Gene3D G3DSA:3.90.740.10 226 412 9.5E-253 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 401 1.2E-68 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 SUPERFAMILY SSF47323 643 816 1.72E-32 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Gene3D G3DSA:3.10.20.590 754 816 3.4E-17 T 12-10-2018 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Pfam PF08264 Anticodon-binding domain of tRNA 663 778 4.9E-21 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Pfam PF09334 tRNA synthetases class I (M) 41 186 1.7E-17 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Gene3D G3DSA:3.40.50.620 32 571 9.5E-253 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Gene3D G3DSA:2.30.210.10 572 587 9.5E-253 T 12-10-2018 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 815 21.616 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLSA_c40920 059b908e7572c154dfd6102248e2c513 816 SUPERFAMILY SSF52374 7 622 1.49E-136 T 12-10-2018 CLSA_c18430 f64240ad5b756b3c7851fff7ba882f5f 259 SUPERFAMILY SSF53474 4 258 9.53E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c18430 f64240ad5b756b3c7851fff7ba882f5f 259 Gene3D G3DSA:3.40.50.1820 1 259 2.0E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c18430 f64240ad5b756b3c7851fff7ba882f5f 259 Pfam PF00561 alpha/beta hydrolase fold 12 126 6.4E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 Gene3D G3DSA:3.20.70.20 64 737 2.4E-190 T 12-10-2018 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 Pfam PF02867 Ribonucleotide reductase, barrel domain 215 727 9.4E-142 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 428 439 2.6E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 612 639 2.6E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 290 309 2.6E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 485 508 2.6E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 523 545 2.6E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 551 574 2.6E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 135 210 4.6E-21 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 SUPERFAMILY SSF48168 15 213 6.67E-59 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 SUPERFAMILY SSF51998 214 732 1.71E-161 T 12-10-2018 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 138 731 2.1E-174 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02460 d9c7fd657afbd0b1b0ab18091f1c0958 743 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 601 623 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c04790 dc7162d13f7523fb8bb49806eca24b58 338 SUPERFAMILY SSF56112 10 334 8.34E-61 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c04790 dc7162d13f7523fb8bb49806eca24b58 338 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 20 332 7.0E-95 T 12-10-2018 IPR014255 Spore coat protein CotS CLSA_c04790 dc7162d13f7523fb8bb49806eca24b58 338 Gene3D G3DSA:3.90.1200.10 99 336 5.8E-70 T 12-10-2018 CLSA_c04790 dc7162d13f7523fb8bb49806eca24b58 338 Pfam PF01636 Phosphotransferase enzyme family 31 253 6.3E-14 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase CLSA_c04790 dc7162d13f7523fb8bb49806eca24b58 338 Gene3D G3DSA:3.30.200.20 1 97 2.9E-23 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1446 367.127 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:3.20.20.140 555 805 1.1E-60 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Pfam PF14579 Helix-hairpin-helix motif 1355 1435 1.3E-8 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Pfam PF00929 Exonuclease 425 578 3.5E-33 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 420 639 7.0E-31 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Pfam PF02811 PHP domain 337 699 6.7E-49 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 827 1239 2.0E-91 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 230 1443 0.0 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:3.30.420.10 419 554 1.1E-41 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 SUPERFAMILY SSF53098 422 879 1.9E-97 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:1.10.150.700 1236 1292 1.2E-13 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:1.10.150.700 1097 1185 3.6E-33 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:1.10.100.20 996 1043 8.7E-57 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 SMART SM00481 336 405 1.5E-22 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Pfam PF14480 DNA polymerase III polC-type N-terminus I 4 71 3.3E-7 T 12-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:3.30.1900.20 974 1096 8.7E-57 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:2.40.50.140 220 319 4.0E-22 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:1.10.150.870 1293 1428 9.0E-47 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 SMART SM00479 422 587 8.6E-46 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Gene3D G3DSA:3.20.20.140 332 418 3.3E-10 T 12-10-2018 CLSA_c37670 42f055ba00f385c579c80f92ec60d896 1446 Pfam PF11490 DNA polymerase III polC-type N-terminus II 83 193 8.3E-12 T 12-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c04680 491bb77702878dc93a91b838b8b7d14a 623 PIRSF PIRSF005091 1 623 1.0E-175 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like CLSA_c04680 491bb77702878dc93a91b838b8b7d14a 623 Pfam PF00884 Sulfatase 272 562 1.0E-30 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CLSA_c04680 491bb77702878dc93a91b838b8b7d14a 623 Gene3D G3DSA:3.40.720.10 264 569 2.0E-64 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CLSA_c04680 491bb77702878dc93a91b838b8b7d14a 623 SUPERFAMILY SSF53649 270 581 1.29E-53 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 SUPERFAMILY SSF63418 1 100 5.75E-23 T 12-10-2018 IPR035911 MurE/MurF, N-terminal CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Pfam PF08245 Mur ligase middle domain 109 309 3.1E-54 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Pfam PF01225 Mur ligase family, catalytic domain 22 97 6.9E-12 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 SUPERFAMILY SSF53623 100 325 9.42E-71 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Gene3D G3DSA:3.90.190.20 338 488 6.5E-60 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 481 35.154 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Gene3D G3DSA:3.40.1190.10 100 332 1.9E-81 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Gene3D G3DSA:3.40.1390.10 1 99 2.3E-29 T 12-10-2018 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 SUPERFAMILY SSF53244 328 483 8.24E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 481 5.9E-164 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLSA_c27320 86170fb822e947af4c5af69efaf87a04 488 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 415 1.3E-19 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Gene3D G3DSA:3.30.54.20 130 184 1.6E-59 T 12-10-2018 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 SUPERFAMILY SSF55681 240 532 3.73E-81 T 12-10-2018 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 SUPERFAMILY SSF52954 533 640 1.48E-31 T 12-10-2018 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 637 3.7E-196 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 4.7E-37 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 4.7E-37 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 4.7E-37 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 4.7E-37 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 4.7E-37 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Pfam PF03129 Anticodon binding domain 547 635 3.7E-23 T 12-10-2018 IPR004154 Anticodon-binding CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Gene3D G3DSA:3.30.930.10 222 538 2.0E-103 T 12-10-2018 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 535 7.6E-34 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Gene3D G3DSA:3.30.980.10 69 219 1.6E-59 T 12-10-2018 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 SUPERFAMILY SSF81271 2 62 6.54E-14 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Gene3D G3DSA:3.40.50.800 539 643 2.5E-35 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 SMART SM00863 167 216 7.6E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 167 216 1.1E-11 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 SUPERFAMILY SSF55186 63 238 2.62E-58 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Pfam PF02824 TGS domain 2 61 1.8E-10 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 640 30.924 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLSA_c03240 3ab754546f1c06dddfd1b098b5392128 643 Gene3D G3DSA:3.10.20.30 1 61 7.3E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 86 171 8.3E-34 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 Gene3D G3DSA:3.30.110.10 79 173 1.7E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 Gene3D G3DSA:3.10.20.80 4 78 3.1E-34 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 ProSitePatterns PS00938 Initiation factor 3 signature. 61 74 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 SUPERFAMILY SSF55200 85 172 4.05E-29 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 10 172 2.3E-67 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 10 79 1.4E-31 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 4 173 29.489 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLSA_c27420 75fcb4afcc2696fec2d3c51e723d0450 173 SUPERFAMILY SSF54364 8 81 4.97E-30 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 Pfam PF02743 Cache domain 43 275 1.8E-29 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 Pfam PF00672 HAMP domain 314 361 1.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 SMART SM00283 394 669 1.8E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 Gene3D G3DSA:1.10.287.950 361 669 1.1E-63 T 12-10-2018 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 SMART SM00304 313 365 2.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 622 1.6E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 Gene3D G3DSA:3.30.450.20 74 282 1.2E-29 T 12-10-2018 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 SUPERFAMILY SSF58104 333 668 2.09E-67 T 12-10-2018 CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 SUPERFAMILY SSF103190 109 200 4.71E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c04850 f4f9c01d1812a01bf814940ad4142257 670 Gene3D G3DSA:3.30.450.20 79 190 1.2E-29 T 12-10-2018 CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 Gene3D G3DSA:1.10.10.10 1 136 1.7E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 SMART SM00347 24 124 2.1E-27 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 SUPERFAMILY SSF46785 2 135 2.73E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CLSA_c40880 37c2a5e9913938e41b12b01804889fb4 136 Pfam PF01047 MarR family 32 88 2.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c17900 a1e3b977081cf475f5094c06d6056e97 312 Gene3D G3DSA:3.40.50.300 1 185 1.5E-21 T 12-10-2018 CLSA_c17900 a1e3b977081cf475f5094c06d6056e97 312 SUPERFAMILY SSF52540 3 179 3.72E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17900 a1e3b977081cf475f5094c06d6056e97 312 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 171 4.3E-10 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLSA_c43260 6f96504723f1779be110c8322312fb7d 394 Pfam PF04914 DltD protein 43 391 2.9E-101 T 12-10-2018 IPR006998 DltD CLSA_c43260 6f96504723f1779be110c8322312fb7d 394 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 8 391 1.6E-98 T 12-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes CLSA_c43260 6f96504723f1779be110c8322312fb7d 394 PIRSF PIRSF021438 1 394 3.0E-93 T 12-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes CLSA_c43260 6f96504723f1779be110c8322312fb7d 394 SUPERFAMILY SSF52266 300 391 4.58E-6 T 12-10-2018 CLSA_c19400 ea5ababa67b4a282acb412bf5bdfc422 390 Gene3D G3DSA:3.40.630.40 177 366 5.3E-40 T 12-10-2018 CLSA_c19400 ea5ababa67b4a282acb412bf5bdfc422 390 SUPERFAMILY SSF53187 179 363 1.66E-35 T 12-10-2018 CLSA_c19400 ea5ababa67b4a282acb412bf5bdfc422 390 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 181 358 1.0E-37 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c19400 ea5ababa67b4a282acb412bf5bdfc422 390 SMART SM00646 239 358 4.6E-5 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c31070 09ab5f1ca04fc333914e73a0650f0c0a 485 Pfam PF05598 Transposase domain (DUF772) 52 125 9.8E-18 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c31070 09ab5f1ca04fc333914e73a0650f0c0a 485 Pfam PF13751 Transposase DDE domain 355 479 5.3E-16 T 12-10-2018 IPR025668 Transposase DDE domain CLSA_c29320 eb2c47050fe93c6a14645f40911173d2 237 Pfam PF01863 Protein of unknown function DUF45 22 230 3.3E-58 T 12-10-2018 IPR002725 Protein of unknown function DUF45 CLSA_c29320 eb2c47050fe93c6a14645f40911173d2 237 Gene3D G3DSA:3.30.2010.10 139 229 9.3E-19 T 12-10-2018 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 Gene3D G3DSA:3.90.550.10 1 117 2.1E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 Pfam PF00535 Glycosyl transferase family 2 6 89 1.1E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 Gene3D G3DSA:1.25.40.10 169 236 3.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 Gene3D G3DSA:1.25.40.10 253 451 2.7E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 SMART SM00028 202 235 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 SMART SM00028 319 352 0.051 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 SUPERFAMILY SSF53448 2 175 1.41E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 SUPERFAMILY SSF48452 190 356 1.77E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c41640 10bcd03020a01611c8e5af17af3d2472 595 SUPERFAMILY SSF48452 319 439 6.58E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 177 9.7E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 Pfam PF04542 Sigma-70 region 2 24 92 5.4E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 Gene3D G3DSA:1.10.10.10 104 180 6.1E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 Pfam PF08281 Sigma-70, region 4 123 174 3.9E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 SUPERFAMILY SSF88659 112 178 9.16E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 Gene3D G3DSA:1.10.1740.10 5 90 2.4E-15 T 12-10-2018 CLSA_c20170 c48c8db7c55ff1ee3fd7662c22b624e0 186 SUPERFAMILY SSF88946 4 104 2.49E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Gene3D G3DSA:3.40.50.300 564 803 4.1E-246 T 12-10-2018 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Gene3D G3DSA:3.90.1150.50 1021 1166 1.8E-30 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Pfam PF03461 TRCF domain 1027 1114 6.0E-25 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SMART SM01058 501 598 3.4E-49 T 12-10-2018 IPR003711 CarD-like/TRCF domain CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SMART SM00490 848 932 2.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SUPERFAMILY SSF141259 496 570 7.85E-25 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SUPERFAMILY SSF143517 1011 1163 4.05E-34 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Pfam PF02559 CarD-like/TRCF domain 502 597 4.9E-33 T 12-10-2018 IPR003711 CarD-like/TRCF domain CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Pfam PF00271 Helicase conserved C-terminal domain 828 931 1.0E-17 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SUPERFAMILY SSF52540 804 1012 1.08E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Gene3D G3DSA:3.30.2060.10 140 225 6.2E-69 T 12-10-2018 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SMART SM00982 1025 1125 2.9E-34 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SUPERFAMILY SSF52540 545 805 2.77E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 48 1156 28.114 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SUPERFAMILY SSF52540 380 486 2.1E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SMART SM00487 622 812 1.9E-37 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Pfam PF00270 DEAD/DEAH box helicase 628 786 8.8E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 SUPERFAMILY SSF52540 16 366 3.01E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Gene3D G3DSA:3.40.50.11180 39 356 6.2E-69 T 12-10-2018 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Gene3D G3DSA:3.40.50.300 500 1011 4.1E-246 T 12-10-2018 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 Gene3D G3DSA:2.30.30.840 505 563 4.1E-246 T 12-10-2018 CLSA_c01110 af9819e76ed8b1a0e82274d782b4fe0f 1166 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1099 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 Pfam PF07719 Tetratricopeptide repeat 125 153 7.9E-6 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 SUPERFAMILY SSF48452 281 412 1.23E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 Gene3D G3DSA:1.25.40.10 2 85 3.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 Gene3D G3DSA:1.25.40.10 296 414 3.6E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 SUPERFAMILY SSF48452 9 168 2.12E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 Gene3D G3DSA:1.25.40.10 86 182 2.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 SMART SM00028 5 38 420.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 SMART SM00028 296 329 160.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 SMART SM00028 121 154 4.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c02490 9b6807230906c377b77861080fc793d7 415 SMART SM00028 39 72 55.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 Gene3D G3DSA:3.30.70.260 239 322 8.5E-9 T 12-10-2018 CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 SUPERFAMILY SSF55021 241 321 3.66E-15 T 12-10-2018 CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 SMART SM00382 26 213 4.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 SMART SM00930 248 321 1.9E-17 T 12-10-2018 IPR018449 NIL domain CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 Pfam PF09383 NIL domain 251 320 1.3E-13 T 12-10-2018 IPR018449 NIL domain CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 Pfam PF00005 ABC transporter 18 165 1.3E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 Gene3D G3DSA:3.40.50.300 1 238 1.6E-72 T 12-10-2018 CLSA_c40330 ac3bcddb235a4157553021f743ea7cea 322 SUPERFAMILY SSF52540 1 233 2.25E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 Pfam PF10397 Adenylosuccinate lyase C-terminus 370 450 1.2E-15 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 9.6E-9 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 9.6E-9 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 9.6E-9 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 9 451 7.6E-117 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 SUPERFAMILY SSF48557 8 455 2.83E-96 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 Gene3D G3DSA:1.20.200.10 420 473 6.5E-6 T 12-10-2018 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 Gene3D G3DSA:1.20.200.10 101 419 2.9E-113 T 12-10-2018 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 SMART SM00998 369 453 1.9E-27 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 Pfam PF00206 Lyase 81 303 4.0E-21 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal CLSA_c14590 ae3e39c1c6f99c2717a4bb9c6cd24072 476 Gene3D G3DSA:1.10.275.10 3 100 3.8E-37 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal CLSA_c21980 6791048cb40a2d5108609e0994cc33c7 140 Pfam PF06725 3D domain 74 134 3.8E-22 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CLSA_c21980 6791048cb40a2d5108609e0994cc33c7 140 Gene3D G3DSA:2.40.40.10 32 122 1.5E-6 T 12-10-2018 IPR036908 RlpA-like domain superfamily CLSA_c21980 6791048cb40a2d5108609e0994cc33c7 140 SUPERFAMILY SSF50685 73 119 1.85E-10 T 12-10-2018 IPR036908 RlpA-like domain superfamily CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Pfam PF11852 Domain of unknown function (DUF3372) 541 655 1.6E-7 T 12-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 10 633 7.7E-232 T 12-10-2018 IPR011840 Pullulanase, type I CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Gene3D G3DSA:2.60.40.10 3 115 1.3E-29 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 SMART SM00642 138 553 1.3E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 SUPERFAMILY SSF81296 7 116 8.4E-21 T 12-10-2018 IPR014756 Immunoglobulin E-set CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 14 97 6.0E-14 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Gene3D G3DSA:2.60.40.1180 563 656 4.4E-19 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Gene3D G3DSA:3.20.20.80 116 562 2.2E-172 T 12-10-2018 CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 SUPERFAMILY SSF51445 125 560 1.06E-125 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Pfam PF00128 Alpha amylase, catalytic domain 179 267 5.6E-11 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c38550 eb8c3c711eaff030ec702d5781c4bdd6 657 Pfam PF00128 Alpha amylase, catalytic domain 298 513 1.6E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c21620 86a3aa6d56a48c7a78fda8f5f3486d93 268 Pfam PF00005 ABC transporter 21 164 4.5E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c21620 86a3aa6d56a48c7a78fda8f5f3486d93 268 Gene3D G3DSA:3.40.50.300 1 265 7.0E-58 T 12-10-2018 CLSA_c21620 86a3aa6d56a48c7a78fda8f5f3486d93 268 SMART SM00382 28 213 6.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c21620 86a3aa6d56a48c7a78fda8f5f3486d93 268 SUPERFAMILY SSF52540 1 226 1.04E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c41370 f4fab51cd0524acaf4239facff0e82b7 243 Gene3D G3DSA:3.40.50.10490 75 241 4.4E-31 T 12-10-2018 CLSA_c41370 f4fab51cd0524acaf4239facff0e82b7 243 Gene3D G3DSA:1.10.10.10 4 72 9.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c41370 f4fab51cd0524acaf4239facff0e82b7 243 SUPERFAMILY SSF46689 5 72 1.58E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c41370 f4fab51cd0524acaf4239facff0e82b7 243 Pfam PF01380 SIS domain 108 222 1.1E-11 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c41370 f4fab51cd0524acaf4239facff0e82b7 243 SUPERFAMILY SSF53697 83 229 3.27E-29 T 12-10-2018 CLSA_c41370 f4fab51cd0524acaf4239facff0e82b7 243 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 71 3.3E-15 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 Gene3D G3DSA:3.40.1280.10 1 159 4.4E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 PIRSF PIRSF000386 1 239 2.2E-101 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 SUPERFAMILY SSF75217 1 235 1.95E-98 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 226 1.2E-97 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 239 105.446 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 Gene3D G3DSA:1.10.1270.20 160 239 7.6E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLSA_c14000 f9ce241667b5bbba778486d45f201d06 239 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 217 5.2E-66 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 143 159 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 SUPERFAMILY SSF51735 2 170 4.48E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 41.483 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 Gene3D G3DSA:3.40.50.720 3 330 7.9E-128 T 12-10-2018 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 Gene3D G3DSA:3.30.360.10 146 312 7.9E-128 T 12-10-2018 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 315 7.6E-15 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 SUPERFAMILY SSF55347 148 312 2.06E-53 T 12-10-2018 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 139 5.6E-33 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 SMART SM00859 3 140 3.7E-48 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLSA_c07180 42032c72ea0438155a3a7e6c4a531af4 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 339 2.6E-126 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c19780 aa3c1b21a45430cef1400f6461a1c57c 158 SMART SM00347 32 131 1.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c19780 aa3c1b21a45430cef1400f6461a1c57c 158 SUPERFAMILY SSF46785 36 154 1.66E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c19780 aa3c1b21a45430cef1400f6461a1c57c 158 Pfam PF01047 MarR family 42 94 7.3E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c19780 aa3c1b21a45430cef1400f6461a1c57c 158 Gene3D G3DSA:1.10.10.10 2 151 4.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 Gene3D G3DSA:2.40.33.10 80 183 2.9E-80 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 Gene3D G3DSA:3.20.20.60 19 350 2.9E-80 T 12-10-2018 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 PRINTS PR01050 Pyruvate kinase family signature 68 84 4.4E-24 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 PRINTS PR01050 Pyruvate kinase family signature 313 331 4.4E-24 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 PRINTS PR01050 Pyruvate kinase family signature 202 216 4.4E-24 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 PRINTS PR01050 Pyruvate kinase family signature 235 261 4.4E-24 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 PRINTS PR01050 Pyruvate kinase family signature 288 312 4.4E-24 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 PRINTS PR01050 Pyruvate kinase family signature 332 348 4.4E-24 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 Pfam PF00224 Pyruvate kinase, barrel domain 17 349 3.7E-54 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c30600 fcffdb00582baf18c3b20a5c99583351 356 SUPERFAMILY SSF51621 14 352 1.7E-54 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 Gene3D G3DSA:3.30.1330.10 644 805 1.7E-31 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 SUPERFAMILY SSF52317 981 1247 4.91E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 SUPERFAMILY SSF56042 441 605 4.54E-37 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 SUPERFAMILY SSF55326 194 429 2.44E-30 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 Gene3D G3DSA:3.40.50.880 983 1248 1.1E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 SUPERFAMILY SSF56042 810 955 1.67E-13 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 SUPERFAMILY SSF55326 624 809 5.53E-39 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 Gene3D G3DSA:3.90.650.10 812 955 2.0E-12 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 984 1247 6.8E-91 T 12-10-2018 CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 SMART SM01211 984 1247 2.5E-116 T 12-10-2018 CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 Gene3D G3DSA:3.90.650.10 428 606 7.3E-45 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 6 1247 0.0 T 12-10-2018 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM CLSA_c12960 3b488ff5096ad8d14a78f532d6e3dfca 1248 Pfam PF02769 AIR synthase related protein, C-terminal domain 441 591 9.6E-23 T 12-10-2018 IPR010918 PurM-like, C-terminal domain CLSA_c21750 5b23a9add311fa27e394897891520e37 182 SUPERFAMILY SSF46785 4 145 8.54E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c21750 5b23a9add311fa27e394897891520e37 182 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CLSA_c21750 5b23a9add311fa27e394897891520e37 182 Gene3D G3DSA:1.10.10.10 1 182 5.5E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c21750 5b23a9add311fa27e394897891520e37 182 Pfam PF12802 MarR family 35 94 3.8E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21750 5b23a9add311fa27e394897891520e37 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 4.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21750 5b23a9add311fa27e394897891520e37 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 4.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21750 5b23a9add311fa27e394897891520e37 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 4.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21750 5b23a9add311fa27e394897891520e37 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 4.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21750 5b23a9add311fa27e394897891520e37 182 SMART SM00347 28 130 3.5E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 Pfam PF01047 MarR family 42 99 1.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 SUPERFAMILY SSF46785 11 146 3.54E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 6.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 6.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 6.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 SMART SM00347 35 135 2.7E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c21190 c3ecb7bef89a34ab1b81ec53a8ec049e 148 Gene3D G3DSA:1.10.10.10 9 148 6.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c04550 908347160690ac484199e2471cdcbf33 463 PIRSF PIRSF006603 4 460 1.7E-79 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c04550 908347160690ac484199e2471cdcbf33 463 Pfam PF01554 MatE 30 191 1.3E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c04550 908347160690ac484199e2471cdcbf33 463 Pfam PF01554 MatE 260 417 4.5E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c04550 908347160690ac484199e2471cdcbf33 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 424 8.4E-55 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c05780 2b4031050e626f9fbfd12466ebd755bb 200 SMART SM00793 4 186 5.5E-32 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c05780 2b4031050e626f9fbfd12466ebd755bb 200 Pfam PF04647 Accessory gene regulator B 8 177 2.0E-36 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 Pfam PF00664 ABC transporter transmembrane region 20 292 2.8E-55 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 Gene3D G3DSA:3.40.50.300 335 580 2.8E-89 T 12-10-2018 CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 SMART SM00382 364 557 8.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 Pfam PF00005 ABC transporter 356 504 3.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 SUPERFAMILY SSF52540 331 575 2.44E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 Gene3D G3DSA:1.20.1560.10 1 325 3.1E-97 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c36880 2425504f6fce8d53298d5851390138b6 580 SUPERFAMILY SSF90123 8 322 1.44E-82 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c39870 3fe5dca24ac1cb9a984d1a8b44bb2b70 212 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 202 1.2E-55 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CLSA_c39870 3fe5dca24ac1cb9a984d1a8b44bb2b70 212 SUPERFAMILY SSF56784 2 209 3.02E-25 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c39870 3fe5dca24ac1cb9a984d1a8b44bb2b70 212 Gene3D G3DSA:3.40.50.1000 4 201 3.8E-41 T 12-10-2018 IPR023214 HAD superfamily CLSA_c39870 3fe5dca24ac1cb9a984d1a8b44bb2b70 212 Gene3D G3DSA:1.20.1440.100 16 88 3.8E-41 T 12-10-2018 CLSA_c39870 3fe5dca24ac1cb9a984d1a8b44bb2b70 212 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 192 1.9E-32 T 12-10-2018 CLSA_c39870 3fe5dca24ac1cb9a984d1a8b44bb2b70 212 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 189 7.6E-31 T 12-10-2018 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 Pfam PF00664 ABC transporter transmembrane region 165 430 9.1E-16 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 Gene3D G3DSA:1.20.1560.10 148 464 1.7E-42 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 Pfam PF03412 Peptidase C39 family 9 137 3.7E-36 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 ProSitePatterns PS00211 ABC transporters family signature. 615 629 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 Pfam PF00005 ABC transporter 494 643 2.0E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 Gene3D G3DSA:3.90.70.10 1 145 2.6E-37 T 12-10-2018 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 Gene3D G3DSA:3.40.50.300 467 722 1.1E-84 T 12-10-2018 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 SUPERFAMILY SSF90123 152 462 5.1E-45 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 SMART SM00382 503 687 1.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44480 8bd7becafea878e6c92ddd36807a6e1a 724 SUPERFAMILY SSF52540 469 711 1.09E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 Gene3D G3DSA:3.20.20.70 4 294 2.6E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 SMART SM01130 5 292 5.7E-130 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 289 3.6E-105 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 PIRSF PIRSF001365 1 294 3.0E-91 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 290 61.451 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.2E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.2E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 2.2E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.2E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 SUPERFAMILY SSF51569 5 292 1.57E-98 T 12-10-2018 CLSA_c42600 1d3a8a7be12126d421bdad7699eac69c 294 Pfam PF00701 Dihydrodipicolinate synthetase family 6 289 8.3E-97 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Gene3D G3DSA:1.10.530.40 377 534 8.5E-31 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Gene3D G3DSA:2.10.270.10 91 148 8.9E-20 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Gene3D G3DSA:2.10.270.10 21 90 1.8E-19 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Gene3D G3DSA:2.10.270.10 149 260 2.2E-32 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Gene3D G3DSA:2.20.120.10 320 368 5.9E-14 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 SUPERFAMILY SSF69360 193 373 3.86E-52 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Gene3D G3DSA:2.10.270.10 261 319 8.3E-16 T 12-10-2018 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 277 293 0.0083 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 296 313 0.093 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 193 209 0.33 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 255 272 8.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 234 251 0.012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 339 355 2.4E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 152 169 2.3E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 71 89 7.0E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 52 69 4.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 92 109 2.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 31 46 0.7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 316 334 1.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 213 231 1.8E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 174 189 0.11 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 132 149 2.0E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF01473 Putative cell wall binding repeat 111 129 0.001 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 Pfam PF00959 Phage lysozyme 406 483 8.0E-9 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 SUPERFAMILY SSF53955 374 528 1.02E-25 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c23870 347dff96fb3ef3c7f73f67213f03b3bf 535 SUPERFAMILY SSF69360 30 235 2.12E-66 T 12-10-2018 CLSA_c00800 9ef11864abe683fd9b6e66ebc457dc6d 257 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 241 1.3E-57 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c00800 9ef11864abe683fd9b6e66ebc457dc6d 257 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 248 14.144 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c00800 9ef11864abe683fd9b6e66ebc457dc6d 257 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 243 3.4E-35 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c30450 0eb379d8970a318fc6a42f6eb614cd20 376 SUPERFAMILY SSF54862 178 247 3.91E-16 T 12-10-2018 CLSA_c30450 0eb379d8970a318fc6a42f6eb614cd20 376 Pfam PF04015 Domain of unknown function (DUF362) 42 315 9.6E-49 T 12-10-2018 IPR007160 Domain of unknown function DUF362 CLSA_c30450 0eb379d8970a318fc6a42f6eb614cd20 376 Pfam PF00037 4Fe-4S binding domain 222 244 9.7E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c30450 0eb379d8970a318fc6a42f6eb614cd20 376 Gene3D G3DSA:3.30.70.20 190 272 1.0E-10 T 12-10-2018 CLSA_c16950 57ae5f1f437a2c318707bbc1d5bb5f8f 359 Gene3D G3DSA:3.30.360.10 130 291 7.9E-107 T 12-10-2018 CLSA_c16950 57ae5f1f437a2c318707bbc1d5bb5f8f 359 Gene3D G3DSA:3.40.50.720 9 337 7.9E-107 T 12-10-2018 CLSA_c16950 57ae5f1f437a2c318707bbc1d5bb5f8f 359 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 7 343 3.5E-76 T 12-10-2018 IPR010091 Thiazolinyl imide reductase CLSA_c16950 57ae5f1f437a2c318707bbc1d5bb5f8f 359 SUPERFAMILY SSF51735 8 138 2.13E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c16950 57ae5f1f437a2c318707bbc1d5bb5f8f 359 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 126 5.7E-19 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLSA_c24960 50535950f1baa69605280a88343222c8 863 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 33 247 4.3E-23 T 12-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain CLSA_c24960 50535950f1baa69605280a88343222c8 863 Gene3D G3DSA:1.10.3210.30 16 240 1.7E-14 T 12-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CLSA_c24960 50535950f1baa69605280a88343222c8 863 Gene3D G3DSA:3.40.50.300 283 515 7.2E-18 T 12-10-2018 CLSA_c24960 50535950f1baa69605280a88343222c8 863 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 326 681 2.5E-44 T 12-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core CLSA_c24960 50535950f1baa69605280a88343222c8 863 Pfam PF00271 Helicase conserved C-terminal domain 545 660 5.2E-5 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c24960 50535950f1baa69605280a88343222c8 863 Gene3D G3DSA:3.40.50.300 517 692 1.0E-10 T 12-10-2018 CLSA_c24960 50535950f1baa69605280a88343222c8 863 SUPERFAMILY SSF52540 323 672 1.73E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c24960 50535950f1baa69605280a88343222c8 863 SMART SM00487 305 531 8.5E-6 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c24960 50535950f1baa69605280a88343222c8 863 Pfam PF00270 DEAD/DEAH box helicase 326 500 1.0E-9 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c05470 49941705aa22da3b7cfee9a2ce20c63d 431 Pfam PF07687 Peptidase dimerisation domain 184 271 4.1E-6 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain CLSA_c05470 49941705aa22da3b7cfee9a2ce20c63d 431 Pfam PF01546 Peptidase family M20/M25/M40 75 278 7.3E-8 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 CLSA_c05470 49941705aa22da3b7cfee9a2ce20c63d 431 SUPERFAMILY SSF53187 2 412 1.48E-54 T 12-10-2018 CLSA_c05470 49941705aa22da3b7cfee9a2ce20c63d 431 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 383 1.7E-69 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 CLSA_c05470 49941705aa22da3b7cfee9a2ce20c63d 431 SUPERFAMILY SSF55031 180 286 1.26E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CLSA_c05470 49941705aa22da3b7cfee9a2ce20c63d 431 PIRSF PIRSF037227 1 431 2.3E-134 T 12-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 SUPERFAMILY SSF55073 429 539 5.96E-35 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 Gene3D G3DSA:3.30.70.270 420 545 1.2E-41 T 12-10-2018 CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 SUPERFAMILY SSF55073 588 638 5.1E-5 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 541 1.6E-41 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 Gene3D G3DSA:3.30.450.40 105 282 1.4E-32 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 SUPERFAMILY SSF55781 277 425 3.92E-10 T 12-10-2018 CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 543 4.2E-34 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 SMART SM00065 132 273 4.9E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 Gene3D G3DSA:3.30.70.270 574 641 1.3E-6 T 12-10-2018 CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 Pfam PF13185 GAF domain 131 263 2.8E-18 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 SMART SM00267 413 639 1.4E-27 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 Gene3D G3DSA:3.30.450.40 283 419 2.6E-9 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c21870 79ff904d46097257eb33764d4ebfa906 644 SUPERFAMILY SSF55781 115 270 5.89E-31 T 12-10-2018 CLSA_c36220 4f0239340bc47b22856569eaa104fd2a 216 Gene3D G3DSA:3.40.50.360 1 213 4.4E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c36220 4f0239340bc47b22856569eaa104fd2a 216 SUPERFAMILY SSF52218 1 215 1.24E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c36220 4f0239340bc47b22856569eaa104fd2a 216 Pfam PF03358 NADPH-dependent FMN reductase 1 128 2.0E-26 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 Pfam PF00072 Response regulator receiver domain 3 111 9.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 SMART SM00448 1 111 8.8E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 2.2E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 SMART SM00862 147 223 1.6E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 Gene3D G3DSA:3.40.50.2300 1 126 1.6E-37 T 12-10-2018 CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 SUPERFAMILY SSF52172 2 185 2.99E-40 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c05420 2065010005be94f3f4a3495334a54af3 234 Gene3D G3DSA:1.10.10.10 127 227 5.0E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c12560 4c75e2296cc39623f225cd38d1da57d1 53 Gene3D G3DSA:2.20.28.10 1 51 4.2E-26 T 12-10-2018 CLSA_c12560 4c75e2296cc39623f225cd38d1da57d1 53 Pfam PF00301 Rubredoxin 3 49 5.8E-22 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c12560 4c75e2296cc39623f225cd38d1da57d1 53 SUPERFAMILY SSF57802 1 51 4.04E-22 T 12-10-2018 CLSA_c12560 4c75e2296cc39623f225cd38d1da57d1 53 PRINTS PR00163 Rubredoxin signature 33 49 2.9E-11 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c12560 4c75e2296cc39623f225cd38d1da57d1 53 PRINTS PR00163 Rubredoxin signature 3 19 2.9E-11 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c12560 4c75e2296cc39623f225cd38d1da57d1 53 PIRSF PIRSF000071 1 53 1.2E-28 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 197 29.485 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Gene3D G3DSA:1.10.150.20 66 138 2.6E-23 T 12-10-2018 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 SUPERFAMILY SSF50249 1 63 4.34E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Gene3D G3DSA:2.40.50.140 1 65 1.0E-18 T 12-10-2018 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 SUPERFAMILY SSF46929 154 197 9.68E-9 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 5.5E-44 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.6E-14 T 12-10-2018 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Gene3D G3DSA:1.10.8.10 152 196 3.3E-10 T 12-10-2018 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 SUPERFAMILY SSF47781 66 133 1.81E-18 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Pfam PF07499 RuvA, C-terminal domain 154 197 2.8E-14 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CLSA_c28790 9438573df9e999d190cb1d833b8eecbb 198 Pfam PF01330 RuvA N terminal domain 1 62 4.1E-18 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 Gene3D G3DSA:2.40.37.10 9 373 1.6E-133 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 Pfam PF01168 Alanine racemase, N-terminal domain 12 232 2.8E-64 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 SMART SM01005 246 374 1.7E-71 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 SUPERFAMILY SSF51419 12 247 6.87E-65 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 Hamap MF_01201 Alanine racemase. 5 374 34.493 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 279 294 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 127 139 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 356 369 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 162 173 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 30 46 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 205 232 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 300 317 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 262 277 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 PRINTS PR00992 Alanine racemase signature 66 84 6.1E-57 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 Gene3D G3DSA:3.20.20.10 14 228 1.6E-133 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 SUPERFAMILY SSF50621 239 382 5.23E-53 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 TIGRFAM TIGR00492 alr: alanine racemase 6 374 7.8E-117 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c38510 fc8ccd11072f6d02ba7310d5a40a5984 387 Pfam PF00842 Alanine racemase, C-terminal domain 246 373 1.3E-46 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 5 371 1.3E-104 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 385 146.881 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 SUPERFAMILY SSF52402 173 383 4.85E-50 T 12-10-2018 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 SUPERFAMILY SSF143437 6 171 3.66E-41 T 12-10-2018 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 Gene3D G3DSA:3.40.50.620 173 385 3.0E-71 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 Gene3D G3DSA:3.30.2130.30 1 172 1.6E-44 T 12-10-2018 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 173 368 1.2E-67 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 Pfam PF02926 THUMP domain 60 157 1.2E-16 T 12-10-2018 IPR004114 THUMP domain GO:0003723 CLSA_c31380 810cf88fe1368b3faaa6cb24f5dce055 385 SMART SM00981 71 161 8.0E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 CLSA_c33560 21efb963b6c05dc10abe7bed254cf036 111 SUPERFAMILY SSF103481 8 109 6.28E-9 T 12-10-2018 CLSA_c33560 21efb963b6c05dc10abe7bed254cf036 111 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 110 22.607 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CLSA_c33560 21efb963b6c05dc10abe7bed254cf036 111 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 3 111 5.8E-43 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CLSA_c43000 a942c67b647cbbc26bbadb3d14c17aa8 494 Pfam PF00905 Penicillin binding protein transpeptidase domain 172 488 3.7E-67 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLSA_c43000 a942c67b647cbbc26bbadb3d14c17aa8 494 SUPERFAMILY SSF56519 43 122 1.28E-9 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CLSA_c43000 a942c67b647cbbc26bbadb3d14c17aa8 494 SUPERFAMILY SSF56601 155 492 7.34E-86 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c43000 a942c67b647cbbc26bbadb3d14c17aa8 494 Gene3D G3DSA:3.90.1310.10 64 388 8.5E-124 T 12-10-2018 CLSA_c43000 a942c67b647cbbc26bbadb3d14c17aa8 494 Gene3D G3DSA:3.40.710.10 154 487 8.5E-124 T 12-10-2018 CLSA_c28080 e953b1a52d7d7375c57b900b9af7eac3 167 Gene3D G3DSA:3.40.630.30 28 164 9.2E-27 T 12-10-2018 CLSA_c28080 e953b1a52d7d7375c57b900b9af7eac3 167 Pfam PF13673 Acetyltransferase (GNAT) domain 46 166 1.1E-17 T 12-10-2018 IPR000182 GNAT domain CLSA_c28080 e953b1a52d7d7375c57b900b9af7eac3 167 SUPERFAMILY SSF55729 30 166 3.32E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 SUPERFAMILY SSF55979 1 119 2.62E-24 T 12-10-2018 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 244 363 1.7E-30 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 239 2.0E-29 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 364 9.9E-98 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 Gene3D G3DSA:3.70.10.10 137 362 2.8E-119 T 12-10-2018 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 SMART SM00480 17 360 2.0E-108 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 SUPERFAMILY SSF55979 243 364 2.3E-33 T 12-10-2018 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.2E-27 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 SUPERFAMILY SSF55979 124 242 4.11E-28 T 12-10-2018 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 Gene3D G3DSA:3.10.150.10 1 240 2.8E-119 T 12-10-2018 CLSA_c00020 c88424d1f97e243ef3b64a15c491c9b2 366 PIRSF PIRSF000804 1 365 2.5E-111 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 SMART SM00382 28 247 2.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 SMART SM00382 349 511 3.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 Gene3D G3DSA:3.40.50.300 288 516 1.0E-45 T 12-10-2018 CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 Pfam PF00005 ABC transporter 341 469 4.2E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 SUPERFAMILY SSF52540 307 505 7.71E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 SUPERFAMILY SSF52540 5 246 1.54E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 Pfam PF00005 ABC transporter 20 191 1.1E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 Gene3D G3DSA:3.40.50.300 6 285 3.8E-64 T 12-10-2018 CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 Pfam PF12848 ABC transporter 230 315 4.8E-24 T 12-10-2018 IPR032781 ABC-transporter extension domain CLSA_c28150 879d7de4279f2c5fcabc489675a71ce2 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c38570 af62522f671546d8cbc9ed89b01c193a 300 Pfam PF06207 Protein of unknown function (DUF1002) 39 258 7.5E-80 T 12-10-2018 IPR009343 Protein of unknown function DUF1002 CLSA_c21430 e0a01d5fc0fcea941dcc8b5757ebb669 366 Gene3D G3DSA:3.40.50.2300 43 350 2.2E-84 T 12-10-2018 CLSA_c21430 e0a01d5fc0fcea941dcc8b5757ebb669 366 Pfam PF13407 Periplasmic binding protein domain 43 310 2.0E-49 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c21430 e0a01d5fc0fcea941dcc8b5757ebb669 366 Gene3D G3DSA:3.40.50.2300 143 366 2.2E-84 T 12-10-2018 CLSA_c21430 e0a01d5fc0fcea941dcc8b5757ebb669 366 SUPERFAMILY SSF53822 41 366 2.03E-54 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c12700 0eb7e42da7f04618504d0bf387644463 293 SUPERFAMILY SSF56281 43 291 4.19E-57 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c12700 0eb7e42da7f04618504d0bf387644463 293 Pfam PF00753 Metallo-beta-lactamase superfamily 53 248 1.6E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c12700 0eb7e42da7f04618504d0bf387644463 293 SMART SM00849 55 250 1.0E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c12700 0eb7e42da7f04618504d0bf387644463 293 Gene3D G3DSA:3.60.15.10 43 291 3.0E-76 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 SUPERFAMILY SSF102114 15 316 1.31E-72 T 12-10-2018 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 Hamap MF_01694 Biotin synthase [bioB]. 15 319 42.374 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 TIGRFAM TIGR00433 bioB: biotin synthase 24 317 2.8E-121 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 SMART SM00729 52 257 7.9E-36 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 PIRSF PIRSF001619 1 322 9.0E-112 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 317 3.2E-16 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 Gene3D G3DSA:3.20.20.70 15 321 9.4E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 SMART SM00876 228 318 7.9E-35 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c43920 59db1fd2ae4f87438a65d98d3012f725 322 Pfam PF04055 Radical SAM superfamily 61 214 3.6E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c39020 4266870bd7b327ef84689c28e65e835e 73 SUPERFAMILY SSF50037 6 72 7.63E-21 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal CLSA_c39020 4266870bd7b327ef84689c28e65e835e 73 Gene3D G3DSA:2.30.30.90 1 73 5.1E-25 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain CLSA_c39020 4266870bd7b327ef84689c28e65e835e 73 SMART SM00899 2 73 1.2E-19 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLSA_c39020 4266870bd7b327ef84689c28e65e835e 73 Pfam PF04023 FeoA domain 3 71 1.4E-16 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 Pfam PF00005 ABC transporter 351 500 7.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 Gene3D G3DSA:1.20.1560.10 6 323 1.8E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 Gene3D G3DSA:3.40.50.300 332 576 2.5E-83 T 12-10-2018 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 SUPERFAMILY SSF52540 328 570 2.78E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 SUPERFAMILY SSF90123 19 318 2.88E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 Pfam PF00664 ABC transporter transmembrane region 25 290 2.4E-18 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c17130 5a58cafae5465dfe4e5ce2b5d2ce3491 578 SMART SM00382 360 546 6.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 SUPERFAMILY SSF51717 315 571 2.35E-84 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 SUPERFAMILY SSF52242 666 806 1.23E-40 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 SUPERFAMILY SSF82282 3 356 2.88E-109 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 SUPERFAMILY SSF47644 596 676 3.66E-17 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Pfam PF00809 Pterin binding enzyme 317 537 1.2E-35 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 PIRSF PIRSF037472 1 806 0.0 T 12-10-2018 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Pfam PF02574 Homocysteine S-methyltransferase 12 284 2.5E-64 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Gene3D G3DSA:3.20.20.20 313 580 6.5E-98 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Pfam PF02607 B12 binding domain 601 673 8.3E-17 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Gene3D G3DSA:1.10.1240.10 598 680 1.7E-17 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Gene3D G3DSA:3.40.50.280 685 806 3.4E-46 T 12-10-2018 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Pfam PF02310 B12 binding domain 688 794 2.7E-23 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 SMART SM01018 598 680 9.9E-28 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30720 e62d37424d6153136cea27801f7581ae 806 Gene3D G3DSA:3.20.20.330 2 297 1.5E-93 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 PRINTS PR00046 Major sigma-70 factor signature 201 216 1.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 PRINTS PR00046 Major sigma-70 factor signature 82 95 1.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 PRINTS PR00046 Major sigma-70 factor signature 180 192 1.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 PRINTS PR00046 Major sigma-70 factor signature 216 227 1.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 Gene3D G3DSA:1.10.10.10 157 234 1.8E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 3 235 1.2E-128 T 12-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 Pfam PF04545 Sigma-70, region 4 176 229 1.4E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 Gene3D G3DSA:1.20.120.1810 28 127 7.4E-25 T 12-10-2018 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 201 227 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 56 230 2.1E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 SUPERFAMILY SSF88659 139 232 2.24E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 PIRSF PIRSF000770 14 235 1.5E-71 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 SUPERFAMILY SSF88946 7 127 5.1E-35 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 82 95 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13420 da614c4566c22a0c72d6416bdb7d4535 235 Pfam PF04542 Sigma-70 region 2 58 127 5.3E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 SMART SM00895 84 211 9.4E-18 T 12-10-2018 IPR011711 GntR, C-terminal CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 SUPERFAMILY SSF48008 80 219 1.07E-23 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 71 3.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 SUPERFAMILY SSF46785 8 78 1.5E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 Gene3D G3DSA:1.10.10.10 9 74 1.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 SMART SM00345 16 74 1.9E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 Gene3D G3DSA:1.20.120.530 78 223 9.1E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CLSA_c17880 0084c31f775ef6afd0e63643153c05e5 226 Pfam PF07729 FCD domain 84 210 4.1E-21 T 12-10-2018 IPR011711 GntR, C-terminal CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SUPERFAMILY SSF55785 274 381 1.68E-18 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Gene3D G3DSA:1.10.3210.10 535 725 2.6E-64 T 12-10-2018 CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Gene3D G3DSA:3.30.450.20 248 371 6.0E-21 T 12-10-2018 CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 380 9.0E-20 T 12-10-2018 IPR000014 PAS domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 252 2.6E-15 T 12-10-2018 IPR000014 PAS domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SMART SM00471 550 685 5.2E-6 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SUPERFAMILY SSF55785 125 246 6.46E-14 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SMART SM00091 135 201 0.001 T 12-10-2018 IPR000014 PAS domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SMART SM00091 260 325 6.8E-8 T 12-10-2018 IPR000014 PAS domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Pfam PF13487 HD domain 605 667 4.4E-20 T 12-10-2018 CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Pfam PF08447 PAS fold 284 351 1.8E-9 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 533 3.0E-35 T 12-10-2018 IPR000160 GGDEF domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Gene3D G3DSA:3.30.70.270 372 534 8.5E-44 T 12-10-2018 CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Pfam PF13426 PAS domain 149 246 1.3E-10 T 12-10-2018 IPR000014 PAS domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 380 537 1.2E-38 T 12-10-2018 IPR000160 GGDEF domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SMART SM00086 208 248 1.9 T 12-10-2018 IPR001610 PAC motif CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SMART SM00086 333 373 0.44 T 12-10-2018 IPR001610 PAC motif CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SMART SM00267 373 538 7.0E-38 T 12-10-2018 IPR000160 GGDEF domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SUPERFAMILY SSF55073 389 532 1.1E-36 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 Gene3D G3DSA:3.30.450.20 130 246 2.1E-19 T 12-10-2018 CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 TIGRFAM TIGR00277 HDIG: HDIG domain 556 645 2.7E-7 T 12-10-2018 IPR006675 HDIG domain CLSA_c33780 dd82ea5c67fd072f017d6d1eb4fca98c 725 SUPERFAMILY SSF109604 555 713 2.42E-36 T 12-10-2018 CLSA_c36820 149d650861874f12298e2e1a22acd6ac 365 Gene3D G3DSA:3.40.50.2300 41 323 2.8E-92 T 12-10-2018 CLSA_c36820 149d650861874f12298e2e1a22acd6ac 365 Gene3D G3DSA:3.40.50.2300 150 301 2.8E-92 T 12-10-2018 CLSA_c36820 149d650861874f12298e2e1a22acd6ac 365 Pfam PF13407 Periplasmic binding protein domain 41 321 1.4E-48 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c36820 149d650861874f12298e2e1a22acd6ac 365 SUPERFAMILY SSF53822 37 334 3.93E-62 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c43960 74833d0c88fc9dc8763b5953692b3ee1 418 Pfam PF06245 Protein of unknown function (DUF1015) 4 415 1.4E-137 T 12-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 CLSA_c43960 74833d0c88fc9dc8763b5953692b3ee1 418 PIRSF PIRSF033563 1 418 1.5E-152 T 12-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 142 157 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 PIRSF PIRSF001563 1 434 2.5E-143 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 Pfam PF08245 Mur ligase middle domain 46 271 1.7E-21 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 Gene3D G3DSA:3.40.1190.10 1 299 1.5E-101 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 429 1.4E-122 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 Gene3D G3DSA:3.90.190.20 300 434 8.6E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 SUPERFAMILY SSF53244 300 432 2.56E-28 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 SUPERFAMILY SSF53623 2 298 2.24E-95 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLSA_c27630 35197cf532e8d7d05d99c4050d45f633 435 Pfam PF02875 Mur ligase family, glutamate ligase domain 300 376 4.4E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CLSA_c17140 d3d0951e621af30aa30962a6724c2dd2 213 Gene3D G3DSA:2.60.40.420 1 57 1.5E-11 T 12-10-2018 IPR008972 Cupredoxin CLSA_c17140 d3d0951e621af30aa30962a6724c2dd2 213 Pfam PF07732 Multicopper oxidase 1 57 1.2E-9 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CLSA_c17140 d3d0951e621af30aa30962a6724c2dd2 213 Gene3D G3DSA:2.60.40.420 58 213 3.0E-38 T 12-10-2018 IPR008972 Cupredoxin CLSA_c17140 d3d0951e621af30aa30962a6724c2dd2 213 SUPERFAMILY SSF49503 64 195 6.88E-29 T 12-10-2018 IPR008972 Cupredoxin CLSA_c17140 d3d0951e621af30aa30962a6724c2dd2 213 Pfam PF07731 Multicopper oxidase 92 197 2.3E-21 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CLSA_c17140 d3d0951e621af30aa30962a6724c2dd2 213 SUPERFAMILY SSF49503 8 69 8.81E-12 T 12-10-2018 IPR008972 Cupredoxin CLSA_c30700 3200378923fe764332d2a50be73b89ce 267 Pfam PF12706 Beta-lactamase superfamily domain 31 231 6.6E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c30700 3200378923fe764332d2a50be73b89ce 267 SUPERFAMILY SSF56281 4 267 1.97E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c30700 3200378923fe764332d2a50be73b89ce 267 Gene3D G3DSA:3.60.15.10 3 267 5.2E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 Gene3D G3DSA:3.40.50.980 179 352 1.2E-47 T 12-10-2018 CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 519 2.9E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 Gene3D G3DSA:2.30.38.10 353 427 1.2E-24 T 12-10-2018 CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 Gene3D G3DSA:3.40.50.980 20 177 5.3E-46 T 12-10-2018 CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 SUPERFAMILY SSF56801 14 530 2.35E-126 T 12-10-2018 CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 Pfam PF00501 AMP-binding enzyme 30 434 1.2E-75 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c16920 bf3d426372220abdd51cb7ef950b807e 532 Gene3D G3DSA:3.30.300.310 430 531 2.7E-23 T 12-10-2018 CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 SMART SM00382 368 554 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 SUPERFAMILY SSF90123 9 334 3.27E-49 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 Gene3D G3DSA:1.20.1560.10 1 329 1.2E-39 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 Pfam PF00005 ABC transporter 359 508 3.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 Pfam PF00664 ABC transporter transmembrane region 26 293 1.4E-18 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 SUPERFAMILY SSF52540 334 576 6.12E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17120 9f027a99a92e51465e6bc7613b69365b 588 Gene3D G3DSA:3.40.50.300 330 579 8.0E-81 T 12-10-2018 CLSA_c43320 f9738b85307a850da962b8d752e567c0 81 SMART SM00966 8 51 3.4E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c43320 f9738b85307a850da962b8d752e567c0 81 SUPERFAMILY SSF89447 1 53 2.75E-16 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily CLSA_c43320 f9738b85307a850da962b8d752e567c0 81 Gene3D G3DSA:2.10.260.10 1 51 1.1E-25 T 12-10-2018 CLSA_c43320 f9738b85307a850da962b8d752e567c0 81 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 3.6E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c43320 f9738b85307a850da962b8d752e567c0 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.0E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c36990 7edc2961dfb5c10480c616e74d46a58b 275 SMART SM00382 26 195 3.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36990 7edc2961dfb5c10480c616e74d46a58b 275 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c36990 7edc2961dfb5c10480c616e74d46a58b 275 Gene3D G3DSA:3.40.50.300 1 228 5.9E-57 T 12-10-2018 CLSA_c36990 7edc2961dfb5c10480c616e74d46a58b 275 SUPERFAMILY SSF52540 2 208 2.09E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36990 7edc2961dfb5c10480c616e74d46a58b 275 Pfam PF00005 ABC transporter 17 147 7.6E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 Pfam PF02310 B12 binding domain 22 132 2.1E-19 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 SMART SM00729 190 404 2.3E-17 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 SUPERFAMILY SSF52242 26 141 1.18E-9 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 Gene3D G3DSA:3.80.30.20 192 417 5.8E-20 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 Gene3D G3DSA:3.40.50.280 29 147 1.5E-11 T 12-10-2018 CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 Pfam PF04055 Radical SAM superfamily 196 357 6.9E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c03070 1c1bd451da194de7ace046bcf0ff0c74 434 SUPERFAMILY SSF102114 165 399 1.57E-32 T 12-10-2018 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 Pfam PF12844 Helix-turn-helix domain 7 67 2.9E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 Gene3D G3DSA:1.25.40.10 71 184 4.6E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SUPERFAMILY SSF48452 75 190 2.88E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 Gene3D G3DSA:1.10.260.40 4 68 3.3E-16 T 12-10-2018 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SMART SM00028 237 270 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SMART SM00028 277 310 66.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SMART SM00028 75 108 290.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SMART SM00028 155 188 77.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SMART SM00028 197 230 72.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SUPERFAMILY SSF47413 4 68 2.65E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SMART SM00530 9 63 3.2E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 SUPERFAMILY SSF48452 149 341 7.11E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40240 08d8e522666210c1606dd527b33d7d8b 436 Gene3D G3DSA:1.25.40.10 192 433 8.6E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 SUPERFAMILY SSF47384 5 88 5.1E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 SUPERFAMILY SSF55874 77 240 6.02E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 Pfam PF00512 His Kinase A (phospho-acceptor) domain 22 88 1.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 PRINTS PR00344 Bacterial sensor protein C-terminal signature 187 197 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 PRINTS PR00344 Bacterial sensor protein C-terminal signature 228 241 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 PRINTS PR00344 Bacterial sensor protein C-terminal signature 169 183 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 PRINTS PR00344 Bacterial sensor protein C-terminal signature 204 222 5.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 SMART SM00387 132 244 2.3E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 Gene3D G3DSA:1.10.287.130 16 85 1.7E-21 T 12-10-2018 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 SMART SM00388 22 88 2.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 Gene3D G3DSA:3.30.565.10 86 241 8.7E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21700 96e07e6baceb5a4332a38cfeac2a60d6 244 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 133 241 3.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36430 0487e2fe59a31647a46a795f336e2315 341 Gene3D G3DSA:3.40.50.2300 49 316 4.0E-57 T 12-10-2018 CLSA_c36430 0487e2fe59a31647a46a795f336e2315 341 Pfam PF13407 Periplasmic binding protein domain 40 308 2.8E-51 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c36430 0487e2fe59a31647a46a795f336e2315 341 SUPERFAMILY SSF53822 35 325 7.66E-53 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c36430 0487e2fe59a31647a46a795f336e2315 341 Gene3D G3DSA:3.40.50.2300 144 324 4.0E-57 T 12-10-2018 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 SUPERFAMILY SSF50465 345 446 9.11E-28 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 Gene3D G3DSA:2.40.30.10 254 341 1.1E-23 T 12-10-2018 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 43 445 2.4E-158 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 SUPERFAMILY SSF52540 38 250 9.13E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 Gene3D G3DSA:3.40.50.300 23 253 6.5E-64 T 12-10-2018 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 SUPERFAMILY SSF50447 254 341 4.24E-20 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 Gene3D G3DSA:2.40.30.10 343 445 5.6E-28 T 12-10-2018 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 100 228 8.5E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 Pfam PF00009 Elongation factor Tu GTP binding domain 42 227 2.1E-41 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 PRINTS PR00315 GTP-binding elongation factor signature 140 151 3.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 PRINTS PR00315 GTP-binding elongation factor signature 44 57 3.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 PRINTS PR00315 GTP-binding elongation factor signature 104 112 3.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 PRINTS PR00315 GTP-binding elongation factor signature 177 186 3.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 PRINTS PR00315 GTP-binding elongation factor signature 124 134 3.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c38920 aa975b1c8faebad3904facb3f7dca49b 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 97 112 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 SMART SM00382 233 379 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 SMART SM00962 234 425 7.8E-66 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 Pfam PF00448 SRP54-type protein, GTPase domain 237 424 1.5E-46 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 Gene3D G3DSA:1.20.120.1380 191 416 2.5E-70 T 12-10-2018 CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 SUPERFAMILY SSF52540 234 425 2.03E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 321 4.6E-73 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CLSA_c39200 1ecd5e8f95e990984a75255c91b6b81e 430 Gene3D G3DSA:3.40.50.300 229 413 2.5E-70 T 12-10-2018 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 SUPERFAMILY SSF55874 448 585 4.19E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 SUPERFAMILY SSF158472 328 374 1.96E-5 T 12-10-2018 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 2.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 563 2.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 2.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 SMART SM00304 327 379 0.0043 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 SMART SM00387 481 588 2.3E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 585 1.2E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 Gene3D G3DSA:3.30.565.10 446 589 1.7E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 Pfam PF06580 Histidine kinase 392 468 1.0E-21 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 Gene3D G3DSA:1.20.1480.50 292 386 1.5E-8 T 12-10-2018 CLSA_c36400 7e15eecbceeb34e0eba2d9d9eb9bf633 589 Pfam PF02743 Cache domain 55 287 7.6E-20 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c10190 665b2be28ed7599baeb2165d5b4255ba 248 Pfam PF00691 OmpA family 130 229 3.6E-18 T 12-10-2018 IPR006665 OmpA-like domain CLSA_c10190 665b2be28ed7599baeb2165d5b4255ba 248 Gene3D G3DSA:3.30.1330.60 80 246 8.0E-46 T 12-10-2018 IPR036737 OmpA-like domain superfamily CLSA_c10190 665b2be28ed7599baeb2165d5b4255ba 248 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 54 5.9E-20 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain CLSA_c10190 665b2be28ed7599baeb2165d5b4255ba 248 SUPERFAMILY SSF103088 119 235 1.7E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:3.30.450.40 1318 1486 4.5E-25 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF55781 1315 1483 3.65E-17 T 12-10-2018 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1920 1933 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1861 1875 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1896 1914 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1879 1889 2.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Pfam PF00069 Protein kinase domain 9 261 3.7E-37 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF56112 3 262 2.08E-56 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF55785 1500 1612 3.49E-21 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF47384 1692 1777 1.22E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00091 1492 1561 0.0073 T 12-10-2018 IPR000014 PAS domain CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:3.30.200.20 4 92 1.7E-8 T 12-10-2018 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00028 742 775 380.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00028 1207 1240 0.0097 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF52540 292 570 2.79E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00388 1707 1778 1.7E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:3.30.565.10 1783 1948 2.2E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00065 1327 1480 4.3E-4 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:3.30.450.20 1487 1606 5.4E-26 T 12-10-2018 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1825 1934 3.2E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:1.25.40.10 1114 1317 3.5E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Pfam PF13191 AAA ATPase domain 295 483 1.6E-40 T 12-10-2018 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:1.10.510.10 93 274 4.3E-38 T 12-10-2018 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1708 1777 5.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1488 1618 1.5E-13 T 12-10-2018 IPR000014 PAS domain CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Pfam PF08447 PAS fold 1515 1605 3.0E-20 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00086 1568 1611 1.7E-8 T 12-10-2018 IPR001610 PAC motif CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF48452 1207 1286 4.93E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SMART SM00387 1824 1936 1.2E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 Gene3D G3DSA:1.10.287.130 1674 1776 1.8E-20 T 12-10-2018 CLSA_c37440 9db7fcc983c6011f4ae297ba4a2d9aef 1969 SUPERFAMILY SSF55874 1767 1938 9.69E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c01980 45abafff26683e31507c567e434d5051 688 SUPERFAMILY SSF54211 479 594 1.06E-40 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c01980 45abafff26683e31507c567e434d5051 688 SUPERFAMILY SSF52540 5 280 1.42E-111 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01980 45abafff26683e31507c567e434d5051 688 Pfam PF03764 Elongation factor G, domain IV 476 593 1.0E-43 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 5.1E-67 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 SMART SM00838 595 682 2.7E-61 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c01980 45abafff26683e31507c567e434d5051 688 Gene3D G3DSA:3.30.70.240 599 669 7.5E-89 T 12-10-2018 CLSA_c01980 45abafff26683e31507c567e434d5051 688 Pfam PF14492 Elongation Factor G, domain II 401 474 1.8E-33 T 12-10-2018 CLSA_c01980 45abafff26683e31507c567e434d5051 688 SMART SM00889 477 593 1.5E-64 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 686 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c01980 45abafff26683e31507c567e434d5051 688 Gene3D G3DSA:2.40.30.10 292 402 1.6E-42 T 12-10-2018 CLSA_c01980 45abafff26683e31507c567e434d5051 688 SUPERFAMILY SSF54980 598 684 2.41E-32 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c01980 45abafff26683e31507c567e434d5051 688 Gene3D G3DSA:3.40.50.300 1 291 3.4E-113 T 12-10-2018 CLSA_c01980 45abafff26683e31507c567e434d5051 688 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.3E-12 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 Gene3D G3DSA:3.30.230.10 481 682 7.5E-89 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c01980 45abafff26683e31507c567e434d5051 688 Gene3D G3DSA:3.30.70.870 403 480 3.9E-31 T 12-10-2018 CLSA_c01980 45abafff26683e31507c567e434d5051 688 Hamap MF_00054_B Elongation factor G [fusA]. 6 686 111.786 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c01980 45abafff26683e31507c567e434d5051 688 SUPERFAMILY SSF54980 399 477 2.16E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c01980 45abafff26683e31507c567e434d5051 688 Pfam PF00679 Elongation factor G C-terminus 595 681 5.9E-33 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c01980 45abafff26683e31507c567e434d5051 688 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c01980 45abafff26683e31507c567e434d5051 688 SUPERFAMILY SSF50447 263 401 2.78E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c01980 45abafff26683e31507c567e434d5051 688 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c01980 45abafff26683e31507c567e434d5051 688 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 3.9E-37 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 SUPERFAMILY SSF51735 104 288 3.95E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 Gene3D G3DSA:3.40.50.720 100 286 5.1E-111 T 12-10-2018 CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 287 7.7E-62 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 Gene3D G3DSA:3.40.50.720 18 316 5.1E-111 T 12-10-2018 CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 317 1.1E-25 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CLSA_c19090 40c4256222603a29b97a576f093cd47e 318 SUPERFAMILY SSF52283 7 122 5.67E-25 T 12-10-2018 CLSA_c20900 fe50b947c3d2c9b20e76e3c94ec8b464 434 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 8 377 8.4E-60 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CLSA_c20900 fe50b947c3d2c9b20e76e3c94ec8b464 434 SUPERFAMILY SSF53649 4 418 4.58E-80 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CLSA_c20900 fe50b947c3d2c9b20e76e3c94ec8b464 434 Gene3D G3DSA:3.40.720.10 1 434 1.1E-82 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 SMART SM00387 353 465 1.4E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 307 1.8E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 SMART SM00304 190 243 2.9E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 Gene3D G3DSA:1.20.1480.50 152 249 6.3E-12 T 12-10-2018 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 SUPERFAMILY SSF158472 191 240 1.96E-7 T 12-10-2018 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 SUPERFAMILY SSF55874 297 462 8.51E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 SUPERFAMILY SSF47384 229 306 3.53E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 Gene3D G3DSA:3.30.565.10 306 463 5.7E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 Gene3D G3DSA:1.10.287.130 250 305 2.2E-11 T 12-10-2018 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 462 2.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 SMART SM00388 244 308 8.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23310 85e40c3fc061306256454d177d3f797e 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c27930 1482e953a0abd0f17b93ada179cecd4e 310 Gene3D G3DSA:3.20.20.140 1 310 7.4E-99 T 12-10-2018 CLSA_c27930 1482e953a0abd0f17b93ada179cecd4e 310 SUPERFAMILY SSF51556 1 310 8.17E-80 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c27930 1482e953a0abd0f17b93ada179cecd4e 310 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 308 5.1E-88 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 CLSA_c02540 9975f2bb6aa5f1884f13eff2ed5a7401 411 Gene3D G3DSA:2.170.120.40 225 313 1.3E-11 T 12-10-2018 CLSA_c02540 9975f2bb6aa5f1884f13eff2ed5a7401 411 Pfam PF07949 YbbR-like protein 330 407 3.6E-6 T 12-10-2018 IPR012505 YbbR-like CLSA_c02540 9975f2bb6aa5f1884f13eff2ed5a7401 411 Pfam PF07949 YbbR-like protein 41 117 4.1E-5 T 12-10-2018 IPR012505 YbbR-like CLSA_c02540 9975f2bb6aa5f1884f13eff2ed5a7401 411 Pfam PF07949 YbbR-like protein 228 308 6.8E-9 T 12-10-2018 IPR012505 YbbR-like CLSA_c02540 9975f2bb6aa5f1884f13eff2ed5a7401 411 Gene3D G3DSA:2.170.120.30 29 140 7.6E-18 T 12-10-2018 CLSA_c02540 9975f2bb6aa5f1884f13eff2ed5a7401 411 Gene3D G3DSA:2.170.120.30 325 411 5.7E-14 T 12-10-2018 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Gene3D G3DSA:3.40.120.10 173 362 6.0E-70 T 12-10-2018 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 2.8E-43 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 43.946 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 SUPERFAMILY SSF53738 3 180 2.2E-47 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Gene3D G3DSA:3.30.310.50 370 448 1.5E-25 T 12-10-2018 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 SUPERFAMILY SSF55957 358 447 7.98E-21 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 367 1.8E-33 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 SUPERFAMILY SSF53738 157 255 1.37E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 3.8E-173 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 SUPERFAMILY SSF53738 258 364 3.81E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 3.8E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 3.8E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 3.8E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 3.3E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Gene3D G3DSA:3.40.120.10 3 153 1.1E-53 T 12-10-2018 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Gene3D G3DSA:3.40.120.10 256 339 6.0E-70 T 12-10-2018 CLSA_c02640 4bbd37131b5126dbf14fec14f16b6aa4 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 444 9.2E-15 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 SUPERFAMILY SSF51735 160 389 5.92E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 SMART SM01274 15 148 9.8E-86 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 PIRSF PIRSF000106 20 390 6.6E-84 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 1.1E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 Gene3D G3DSA:3.40.50.720 158 390 4.1E-86 T 12-10-2018 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 SMART SM00919 160 383 1.2E-127 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 SUPERFAMILY SSF53223 6 158 3.81E-56 T 12-10-2018 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 Pfam PF00390 Malic enzyme, N-terminal domain 17 110 1.7E-24 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 Pfam PF00390 Malic enzyme, N-terminal domain 111 148 1.6E-6 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c32220 f47ce75c22d9d2955572c90c37393338 390 Gene3D G3DSA:3.40.50.10380 1 157 2.4E-74 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CLSA_c26820 fb97dd6928bb3839121b8d88d6b0214f 284 Hamap MF_00361 NAD kinase [nadK]. 2 274 30.968 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CLSA_c26820 fb97dd6928bb3839121b8d88d6b0214f 284 Gene3D G3DSA:3.40.50.10330 44 272 2.6E-81 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CLSA_c26820 fb97dd6928bb3839121b8d88d6b0214f 284 Pfam PF01513 ATP-NAD kinase 31 256 1.1E-56 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CLSA_c26820 fb97dd6928bb3839121b8d88d6b0214f 284 SUPERFAMILY SSF111331 34 273 1.31E-75 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CLSA_c26820 fb97dd6928bb3839121b8d88d6b0214f 284 Gene3D G3DSA:2.60.200.30 116 251 2.6E-81 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 13 20 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 Pfam PF00012 Hsp70 protein 81 488 2.5E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 Pfam PF00012 Hsp70 protein 10 79 2.4E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 SUPERFAMILY SSF100920 387 489 1.44E-23 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 Gene3D G3DSA:3.30.420.40 11 366 8.2E-90 T 12-10-2018 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 SUPERFAMILY SSF53067 177 371 3.44E-42 T 12-10-2018 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 PRINTS PR00301 70kDa heat shock protein signature 9 22 3.4E-24 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 PRINTS PR00301 70kDa heat shock protein signature 354 374 3.4E-24 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 PRINTS PR00301 70kDa heat shock protein signature 188 198 3.4E-24 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 PRINTS PR00301 70kDa heat shock protein signature 124 144 3.4E-24 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 PRINTS PR00301 70kDa heat shock protein signature 36 48 3.4E-24 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 PRINTS PR00301 70kDa heat shock protein signature 322 338 3.4E-24 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 Gene3D G3DSA:3.30.420.40 176 354 8.2E-90 T 12-10-2018 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 SUPERFAMILY SSF53067 8 169 8.79E-39 T 12-10-2018 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 182 195 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 Gene3D G3DSA:3.90.640.10 218 303 8.2E-90 T 12-10-2018 CLSA_c06680 682a1e357a4f6fe3972c262e758d3ccb 496 Gene3D G3DSA:2.60.34.10 367 494 1.6E-25 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c36370 397f3b7ecd767dbecadf566e79453cea 320 Gene3D G3DSA:1.10.10.10 1 63 5.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36370 397f3b7ecd767dbecadf566e79453cea 320 Pfam PF13280 WYL domain 139 314 4.7E-30 T 12-10-2018 IPR026881 WYL domain CLSA_c36370 397f3b7ecd767dbecadf566e79453cea 320 SUPERFAMILY SSF46785 1 60 5.76E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c36370 397f3b7ecd767dbecadf566e79453cea 320 Pfam PF08279 HTH domain 8 60 4.5E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 SUPERFAMILY SSF102741 364 429 3.92E-17 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Pfam PF01018 GTP1/OBG 3 157 6.6E-59 T 12-10-2018 IPR006169 GTP1/OBG domain CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Hamap MF_01454 GTPase Obg [obg]. 1 331 47.106 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 SUPERFAMILY SSF82051 1 157 1.2E-53 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Gene3D G3DSA:2.40.240.60 359 429 3.1E-14 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 365 429 1.6E-19 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 330 2.3E-136 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Gene3D G3DSA:2.70.210.12 1 157 1.1E-56 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Pfam PF09269 Domain of unknown function (DUF1967) 361 428 4.6E-21 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 PIRSF PIRSF002401 1 376 1.7E-137 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 SUPERFAMILY SSF52540 152 337 6.09E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.3E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 Gene3D G3DSA:3.40.50.300 158 341 2.3E-53 T 12-10-2018 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.2E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 8.2E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 8.2E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.2E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c06430 0c36d5507de33b6b6b53355662c599a9 430 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 324 4.3E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c07810 7abf948d7188ea25e6ba33482298144b 480 Gene3D G3DSA:3.55.50.10 96 162 1.6E-5 T 12-10-2018 CLSA_c07810 7abf948d7188ea25e6ba33482298144b 480 Pfam PF05954 Phage late control gene D protein (GPD) 68 165 1.5E-7 T 12-10-2018 CLSA_c07810 7abf948d7188ea25e6ba33482298144b 480 Gene3D G3DSA:2.30.110.50 72 95 1.6E-5 T 12-10-2018 CLSA_c07810 7abf948d7188ea25e6ba33482298144b 480 SUPERFAMILY SSF69279 11 173 7.94E-22 T 12-10-2018 CLSA_c15140 914d3a6d4563e6fa79f27747b86aad97 184 Gene3D G3DSA:1.10.10.10 2 88 1.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15140 914d3a6d4563e6fa79f27747b86aad97 184 Pfam PF10400 Virulence activator alpha C-term 95 178 2.8E-18 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal CLSA_c15140 914d3a6d4563e6fa79f27747b86aad97 184 SUPERFAMILY SSF46785 4 179 2.16E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c15140 914d3a6d4563e6fa79f27747b86aad97 184 Pfam PF03551 Transcriptional regulator PadR-like family 8 81 8.4E-17 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 567 583 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 37 52 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 72 85 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 115 129 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 504 521 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 486 502 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 524 536 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 420 434 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.0E-72 T 12-10-2018 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 564 624 2.0E-29 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 SUPERFAMILY SSF54211 222 392 8.91E-64 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 175 1.3E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Gene3D G3DSA:3.30.565.10 4 220 4.6E-92 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 SUPERFAMILY SSF56719 394 630 4.45E-91 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Pfam PF00204 DNA gyrase B 222 391 6.1E-65 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 SUPERFAMILY SSF55874 7 219 1.44E-73 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Pfam PF01751 Toprim domain 419 530 3.4E-18 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 8 18 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 375 395 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 313 329 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 361 375 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 221 243 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 470 479 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 182 197 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 588 600 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 197 210 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 PRINTS PR01159 DNA gyrase subunit B signature 604 620 5.0E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 SMART SM00433 37 628 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 635 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 635 93.953 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Gene3D G3DSA:3.30.230.10 221 398 6.0E-76 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 SMART SM00387 33 191 7.8E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c00060 f47b631e44e12055311b6dea19dfaf08 635 Gene3D G3DSA:3.40.50.670 399 635 4.5E-110 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c32000 4bdb98d84a5bd065eefccab13ab0e0cf 208 SUPERFAMILY SSF53254 1 189 1.07E-32 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c32000 4bdb98d84a5bd065eefccab13ab0e0cf 208 SMART SM00855 5 159 1.1E-9 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c32000 4bdb98d84a5bd065eefccab13ab0e0cf 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 172 2.7E-25 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c32000 4bdb98d84a5bd065eefccab13ab0e0cf 208 Gene3D G3DSA:3.40.50.1240 1 202 4.3E-33 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c09270 e3e047ad0465652617e304cfdb914b60 187 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 72 175 1.5E-9 T 12-10-2018 IPR030910 SLAP domain, Bacillus-type CLSA_c21590 9e073971c5b4b101b9fbe7dbbc414cc7 201 Gene3D G3DSA:1.10.1760.20 2 191 6.1E-16 T 12-10-2018 CLSA_c21590 9e073971c5b4b101b9fbe7dbbc414cc7 201 Pfam PF12822 ECF transporter, substrate-specific component 24 179 1.6E-7 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 Pfam PF01261 Xylose isomerase-like TIM barrel 23 233 1.6E-30 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 275 38.825 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 274 2.1E-91 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 SMART SM00518 3 275 5.3E-98 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 172 179 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 SUPERFAMILY SSF51658 2 275 1.17E-86 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily CLSA_c14910 d5d59f4c2acc93b004e375765e51d47a 278 Gene3D G3DSA:3.20.20.150 1 277 1.1E-93 T 12-10-2018 CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 Pfam PF08279 HTH domain 6 59 2.7E-14 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 SUPERFAMILY SSF75500 67 169 9.29E-33 T 12-10-2018 IPR035922 3H domain superfamily CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 Gene3D G3DSA:1.10.10.10 1 62 7.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 75 168 1.0E-21 T 12-10-2018 IPR004173 3H domain GO:0036094 CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 Gene3D G3DSA:3.30.1340.20 64 170 8.7E-34 T 12-10-2018 IPR035922 3H domain superfamily CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 PIRSF PIRSF037847 1 170 1.4E-66 T 12-10-2018 IPR026043 Transcription repressor NadR CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 Pfam PF02829 3H domain 71 166 2.0E-32 T 12-10-2018 IPR004173 3H domain GO:0036094 CLSA_c00140 0af4e76aea544eb5bff84eff5ced0c72 170 SUPERFAMILY SSF46785 1 62 2.9E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 Gene3D G3DSA:3.30.230.30 2 131 2.9E-48 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 SUPERFAMILY SSF54980 137 198 1.44E-9 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 77 106 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 Pfam PF01205 Uncharacterized protein family UPF0029 17 119 8.2E-32 T 12-10-2018 IPR001498 Impact, N-terminal CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 SUPERFAMILY SSF54211 2 130 5.69E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 Pfam PF09186 Domain of unknown function (DUF1949) 139 193 1.2E-15 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CLSA_c11440 5b15b2434cb4ce45917666e34644fb67 215 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 3 200 8.1E-60 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 SUPERFAMILY SSF47384 397 479 6.47E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 SMART SM00387 525 637 7.1E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 Gene3D G3DSA:3.30.565.10 484 640 8.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 576 6.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 6.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 Gene3D G3DSA:1.10.287.130 394 481 8.1E-15 T 12-10-2018 CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 SMART SM00388 411 479 1.0E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 SUPERFAMILY SSF55874 468 636 1.96E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 634 2.8E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c11930 20d7691db9aa03700e0d2e8bb4e41d97 642 Pfam PF00512 His Kinase A (phospho-acceptor) domain 411 478 7.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c35200 e7137ea9fc7b18d9737adbbbbd2b8b6c 192 Pfam PF05076 Suppressor of fused protein (SUFU) 33 189 8.6E-28 T 12-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 CLSA_c35200 e7137ea9fc7b18d9737adbbbbd2b8b6c 192 ProDom PD105609 PLASMID YQCF RSP1132 10 191 4.0E-55 T 12-10-2018 CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 256 9.6E-59 T 12-10-2018 CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 SUPERFAMILY SSF56784 1 261 3.47E-59 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 254 1.5E-51 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 Gene3D G3DSA:3.40.50.1000 3 253 8.3E-61 T 12-10-2018 IPR023214 HAD superfamily CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 Gene3D G3DSA:3.30.1240.10 83 185 8.3E-61 T 12-10-2018 CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.3E-20 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c23980 551d1e557cee86274bc1aff85c609731 262 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 12-10-2018 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 Gene3D G3DSA:3.90.220.20 1 202 3.1E-37 T 12-10-2018 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 SUPERFAMILY SSF116734 211 398 2.29E-38 T 12-10-2018 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 Pfam PF01420 Type I restriction modification DNA specificity domain 214 378 2.4E-16 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 Pfam PF01420 Type I restriction modification DNA specificity domain 7 181 1.7E-17 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 Gene3D G3DSA:1.10.287.1120 352 397 1.5E-35 T 12-10-2018 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 Gene3D G3DSA:3.90.220.20 214 351 1.5E-35 T 12-10-2018 CLSA_c04440 3e61eaa28325146d5a9c2e58266f4773 400 SUPERFAMILY SSF116734 5 200 1.28E-36 T 12-10-2018 CLSA_c15440 3d3aca3ae5cd369740a89396e728cab7 171 SUPERFAMILY SSF52499 2 161 2.62E-27 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c15440 3d3aca3ae5cd369740a89396e728cab7 171 Pfam PF00857 Isochorismatase family 4 154 3.0E-20 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 CLSA_c15440 3d3aca3ae5cd369740a89396e728cab7 171 Gene3D G3DSA:3.40.50.850 1 166 7.5E-24 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 Hamap MF_00300 Chorismate synthase [aroC]. 9 357 32.674 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 TIGRFAM TIGR00033 aroC: chorismate synthase 9 357 2.8E-120 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 Pfam PF01264 Chorismate synthase 9 356 9.4E-127 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 SUPERFAMILY SSF103263 4 356 6.93E-118 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 331 347 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 15 30 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 PIRSF PIRSF001456 2 357 8.3E-135 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c06830 532bbb8d3982480cbfbbb06ca525065c 357 Gene3D G3DSA:3.60.150.10 1 357 5.4E-141 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 5.7E-74 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 4.8E-48 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 51.766 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Gene3D G3DSA:1.20.150.20 372 504 3.1E-49 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Gene3D G3DSA:2.40.30.20 1 93 1.7E-34 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 500 9.7E-252 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 PIRSF PIRSF039088 1 503 4.9E-253 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 SUPERFAMILY SSF52540 96 370 1.59E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.0E-18 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 Gene3D G3DSA:3.40.50.300 94 371 3.4E-126 T 12-10-2018 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 SUPERFAMILY SSF47917 372 500 1.86E-45 T 12-10-2018 CLSA_c05130 1e2fbe9583e26c346453adbfc6462383 504 SUPERFAMILY SSF50615 10 94 2.16E-28 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 681 737 2.8E-15 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 27 324 2.3E-63 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 Pfam PF00460 Flagella basal body rod protein 30 57 7.5E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 PRINTS PR01005 Flagellar hook-associated protein signature 187 211 3.6E-6 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 PRINTS PR01005 Flagellar hook-associated protein signature 34 57 3.6E-6 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 SUPERFAMILY SSF64518 164 522 1.02E-5 T 12-10-2018 CLSA_c39720 a95284ca3bbe2eaee7cd8e9952cfcae0 741 SUPERFAMILY SSF64518 434 739 5.1E-16 T 12-10-2018 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 Gene3D G3DSA:1.20.120.610 5 159 8.4E-56 T 12-10-2018 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 SUPERFAMILY SSF81333 89 157 4.58E-14 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 Pfam PF00137 ATP synthase subunit C 21 79 6.5E-18 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 Pfam PF00137 ATP synthase subunit C 98 156 4.4E-17 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 SUPERFAMILY SSF81333 18 83 1.96E-13 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 108 134 2.5E-10 T 12-10-2018 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 34 58 2.5E-10 T 12-10-2018 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 60 84 2.5E-10 T 12-10-2018 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30820 fbe8214c919a2aa4f22487fb49b830de 162 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 135 158 2.5E-10 T 12-10-2018 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 9.9E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 214 228 9.9E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 9.9E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00412 Epoxide hydrolase signature 50 65 1.8E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00412 Epoxide hydrolase signature 30 48 1.8E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00412 Epoxide hydrolase signature 245 267 1.8E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 PRINTS PR00412 Epoxide hydrolase signature 212 228 1.8E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 Pfam PF00561 alpha/beta hydrolase fold 25 124 7.6E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 Gene3D G3DSA:3.40.50.1820 2 269 3.5E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c17800 669f33d89f91f3242aaf818f82d97f66 270 SUPERFAMILY SSF53474 3 269 2.53E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c08460 8b62488959c55ba45b5f6c15ee851795 267 Gene3D G3DSA:3.30.470.30 24 229 7.2E-21 T 12-10-2018 CLSA_c08460 8b62488959c55ba45b5f6c15ee851795 267 Pfam PF09414 RNA ligase 37 229 1.4E-32 T 12-10-2018 IPR021122 RNA ligase domain, REL/Rln2 CLSA_c08460 8b62488959c55ba45b5f6c15ee851795 267 SUPERFAMILY SSF56091 4 234 6.24E-37 T 12-10-2018 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 Gene3D G3DSA:3.30.70.120 1 112 1.9E-33 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 SMART SM00938 4 105 5.1E-24 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 Pfam PF00543 Nitrogen regulatory protein P-II 5 104 5.4E-25 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 SUPERFAMILY SSF54913 1 112 3.81E-30 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 PRINTS PR00340 P-II protein signature 23 41 1.1E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 PRINTS PR00340 P-II protein signature 2 17 1.1E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 PRINTS PR00340 P-II protein signature 52 75 1.1E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c33200 cf04fa80bc402ebb5441cd6f2d5c914d 112 PRINTS PR00340 P-II protein signature 83 103 1.1E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 Pfam PF00155 Aminotransferase class I and II 86 431 6.3E-23 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 SUPERFAMILY SSF53383 57 436 1.37E-68 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 Gene3D G3DSA:3.90.1150.10 76 433 5.8E-79 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 SMART SM00345 7 66 1.4E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 Gene3D G3DSA:3.40.640.10 115 334 5.8E-79 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 SUPERFAMILY SSF46785 5 71 1.22E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c25370 b07a039ab4f8e107beb9b8f238725fd6 445 Gene3D G3DSA:1.10.10.10 2 68 5.0E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c44010 c2066fc6c920caf1b696914f76dcc121 314 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 83 1.1E-13 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLSA_c44010 c2066fc6c920caf1b696914f76dcc121 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 313 2.3E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c44010 c2066fc6c920caf1b696914f76dcc121 314 SUPERFAMILY SSF161098 103 296 4.06E-29 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c44010 c2066fc6c920caf1b696914f76dcc121 314 Gene3D G3DSA:1.10.3720.10 100 313 8.7E-25 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Pfam PF00689 Cation transporting ATPase, C-terminus 693 863 1.8E-39 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Gene3D G3DSA:3.40.1110.10 334 514 9.8E-275 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 SUPERFAMILY SSF81665 2 865 2.48E-112 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 623 8.3E-24 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 SMART SM00831 3 76 1.3E-16 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 SUPERFAMILY SSF81660 330 518 5.89E-50 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Gene3D G3DSA:3.40.50.1000 321 654 9.8E-275 T 12-10-2018 IPR023214 HAD superfamily CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Gene3D G3DSA:1.20.1110.10 54 861 9.8E-275 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 666 2.5E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 609 625 2.5E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 467 485 2.5E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 581 597 2.5E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Pfam PF00690 Cation transporter/ATPase, N-terminus 8 71 4.7E-16 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 628 6.2E-39 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 6.2E-39 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 518 6.2E-39 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 539 6.2E-39 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 6.2E-39 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 645 6.2E-39 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Gene3D G3DSA:2.70.150.10 19 227 9.8E-275 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 SUPERFAMILY SSF81653 113 224 3.01E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 Pfam PF00122 E1-E2 ATPase 111 304 3.1E-56 T 12-10-2018 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 SUPERFAMILY SSF56784 322 714 4.32E-60 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 349 6.5E-44 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c03450 973c9f35b64495c805072783d178e0e6 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 580 699 1.7E-32 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 356 5.2E-169 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 Pfam PF00472 RF-1 domain 211 321 1.1E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 Gene3D G3DSA:3.30.70.1660 112 342 1.9E-97 T 12-10-2018 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 357 40.738 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 Gene3D G3DSA:3.30.160.20 211 297 1.9E-97 T 12-10-2018 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 SUPERFAMILY SSF75620 10 353 1.28E-138 T 12-10-2018 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 SMART SM00937 65 179 1.1E-64 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 Gene3D G3DSA:1.20.58.410 3 103 6.8E-7 T 12-10-2018 CLSA_c05010 1ae27f220c1e923b38e48f4920413ab2 361 Pfam PF03462 PCRF domain 10 204 6.9E-76 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 317 1.6E-152 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 SUPERFAMILY SSF51569 3 319 2.05E-143 T 12-10-2018 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 Gene3D G3DSA:3.20.20.70 1 320 2.8E-151 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 SMART SM01004 1 319 1.6E-241 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PIRSF PIRSF001415 1 321 5.0E-151 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 238 250 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 2.8E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 186 205 2.8E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 148 167 2.8E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 238 254 2.8E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 293 312 2.8E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c31660 e8bde95001acd9a47242288a80dc25b0 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 263 278 2.8E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CLSA_c03780 f3564924b5777963014495f392bf6ae5 819 Pfam PF07495 Y_Y_Y domain 657 721 5.1E-8 T 12-10-2018 IPR011123 Two component regulator three Y CLSA_c03780 f3564924b5777963014495f392bf6ae5 819 Pfam PF07495 Y_Y_Y domain 36 95 2.0E-8 T 12-10-2018 IPR011123 Two component regulator three Y CLSA_c03780 f3564924b5777963014495f392bf6ae5 819 Pfam PF07495 Y_Y_Y domain 466 528 1.9E-7 T 12-10-2018 IPR011123 Two component regulator three Y CLSA_c03780 f3564924b5777963014495f392bf6ae5 819 Pfam PF07495 Y_Y_Y domain 559 618 2.6E-7 T 12-10-2018 IPR011123 Two component regulator three Y CLSA_c37620 927301826caadee51464000a241268e3 124 Gene3D G3DSA:1.10.10.10 8 71 1.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37620 927301826caadee51464000a241268e3 124 PIRSF PIRSF019455 1 124 1.2E-40 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLSA_c37620 927301826caadee51464000a241268e3 124 Gene3D G3DSA:1.10.4040.10 72 122 4.6E-18 T 12-10-2018 CLSA_c37620 927301826caadee51464000a241268e3 124 SUPERFAMILY SSF46785 5 122 9.26E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37620 927301826caadee51464000a241268e3 124 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 6 123 3.2E-37 T 12-10-2018 IPR014071 Copper transport repressor CopY/TcrY CLSA_c37620 927301826caadee51464000a241268e3 124 Pfam PF03965 Penicillinase repressor 7 121 4.1E-38 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PIRSF PIRSF000410 3 275 5.5E-77 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 263 1.2E-55 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 Gene3D G3DSA:3.40.50.150 72 274 3.1E-59 T 12-10-2018 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 SMART SM00138 5 272 1.4E-68 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 SUPERFAMILY SSF53335 73 262 4.32E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 9.8E-37 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 9.8E-37 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 9.8E-37 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 9.8E-37 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 9.8E-37 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 9.8E-37 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 8 55 2.3E-10 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 Gene3D G3DSA:1.10.155.10 1 71 4.1E-12 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLSA_c20420 8c913ebe672d3929a4da5373f5041c25 280 SUPERFAMILY SSF47757 4 72 1.7E-13 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 Gene3D G3DSA:3.30.870.10 306 454 2.1E-27 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 SUPERFAMILY SSF56024 264 461 4.04E-47 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 56 1.0E-9 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 SMART SM00155 390 417 0.0088 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 SMART SM00155 212 239 1.6E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 477 4.0E-167 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 PIRSF PIRSF000850 275 379 2.1 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 PIRSF PIRSF000850 372 467 0.032 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 PIRSF PIRSF000850 99 189 3.4E-4 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 Hamap MF_01916 Cardiolipin synthase. 8 477 43.521 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 SUPERFAMILY SSF56024 99 307 9.1E-53 T 12-10-2018 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 Pfam PF13091 PLD-like domain 318 443 3.0E-27 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 Pfam PF13091 PLD-like domain 129 272 9.9E-15 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CLSA_c06760 3afd5991c05b37c0ecf9026d906b5249 477 Gene3D G3DSA:3.30.870.10 106 299 2.3E-44 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Pfam PF02824 TGS domain 394 453 5.0E-21 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Gene3D G3DSA:3.30.70.260 657 736 2.8E-16 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Pfam PF13291 ACT domain 656 733 1.0E-18 T 12-10-2018 IPR002912 ACT domain CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Gene3D G3DSA:3.10.20.30 387 460 4.6E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 SMART SM00954 236 346 1.0E-68 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 SUPERFAMILY SSF55021 658 734 7.79E-9 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 SUPERFAMILY SSF81301 181 398 5.4E-65 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 8.0E-39 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Gene3D G3DSA:3.30.460.10 193 325 3.5E-52 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Pfam PF13328 HD domain 24 176 1.3E-53 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 SUPERFAMILY SSF81271 381 453 5.23E-23 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 SUPERFAMILY SSF109604 3 192 1.57E-76 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 24 733 3.2E-252 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 Gene3D G3DSA:1.10.3210.10 1 192 9.1E-86 T 12-10-2018 CLSA_c28690 c25d0683e6879b2e8fc71207b3a9f631 736 SMART SM00471 39 154 5.6E-11 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Gene3D G3DSA:1.10.8.60 321 393 2.3E-19 T 12-10-2018 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Pfam PF01434 Peptidase family M41 379 577 1.5E-49 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 ProSitePatterns PS00674 AAA-protein family signature. 289 307 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Pfam PF06480 FtsH Extracellular 14 92 2.4E-7 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 SUPERFAMILY SSF52540 147 409 1.2E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Gene3D G3DSA:3.40.50.300 133 320 4.3E-67 T 12-10-2018 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 578 30.201 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 185 317 2.6E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 108 577 6.1E-166 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 Gene3D G3DSA:1.20.58.760 394 579 1.4E-54 T 12-10-2018 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 SUPERFAMILY SSF140990 401 577 3.4E-51 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CLSA_c23950 2f904cb0999ff8f170f3ff08ad232a2f 579 SMART SM00382 181 321 2.0E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c16740 de70fb2eecdd17dac9a265581b87407b 137 SMART SM00226 3 128 1.8E-16 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CLSA_c16740 de70fb2eecdd17dac9a265581b87407b 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 125 4.6E-15 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CLSA_c16740 de70fb2eecdd17dac9a265581b87407b 137 SUPERFAMILY SSF52788 1 126 4.06E-28 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CLSA_c16740 de70fb2eecdd17dac9a265581b87407b 137 Gene3D G3DSA:3.40.50.2300 2 134 6.1E-35 T 12-10-2018 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 Gene3D G3DSA:4.10.520.10 1 91 5.8E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 SUPERFAMILY SSF47729 1 90 8.98E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 SMART SM00411 1 90 2.8E-47 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.6E-34 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CLSA_c01190 fbc426257a622ba3925f2316291b2edf 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 Gene3D G3DSA:3.40.50.11060 183 304 1.8E-39 T 12-10-2018 CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 188 537 6.2E-138 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 Gene3D G3DSA:3.40.50.300 363 542 7.4E-39 T 12-10-2018 CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 Pfam PF16360 GTP-binding GTPase Middle Region 280 358 7.7E-31 T 12-10-2018 IPR032305 GTP-binding protein, middle domain CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 SUPERFAMILY SSF52540 364 561 1.22E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 Hamap MF_00900 GTPase HflX [hflX]. 193 566 47.963 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 Pfam PF01926 50S ribosome-binding GTPase 365 494 1.7E-17 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 Pfam PF13167 GTP-binding GTPase N-terminal 191 278 1.9E-30 T 12-10-2018 IPR025121 GTPase HflX, N-terminal CLSA_c11400 46ee6ae6ea9046673f3a2b599341d064 594 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 362 534 3.1E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c13210 507c7bee93bb8ed4f4c04d8dfce9d60c 150 Pfam PF02082 Transcriptional regulator 1 82 4.0E-28 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c13210 507c7bee93bb8ed4f4c04d8dfce9d60c 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.4E-41 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c13210 507c7bee93bb8ed4f4c04d8dfce9d60c 150 SUPERFAMILY SSF46785 2 134 3.74E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c13210 507c7bee93bb8ed4f4c04d8dfce9d60c 150 Gene3D G3DSA:1.10.10.10 1 143 2.4E-53 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c28500 c9d2377f2917598af8a41b834459b9ef 303 Gene3D G3DSA:3.90.550.10 1 293 1.2E-80 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c28500 c9d2377f2917598af8a41b834459b9ef 303 Pfam PF00483 Nucleotidyl transferase 2 238 2.3E-69 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c28500 c9d2377f2917598af8a41b834459b9ef 303 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 1.5E-144 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CLSA_c28500 c9d2377f2917598af8a41b834459b9ef 303 SUPERFAMILY SSF53448 1 286 1.27E-86 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41300 18444505a903b1a5b029d0edacc03389 344 Pfam PF00535 Glycosyl transferase family 2 21 149 7.9E-31 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c41300 18444505a903b1a5b029d0edacc03389 344 SUPERFAMILY SSF53448 20 241 3.19E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41300 18444505a903b1a5b029d0edacc03389 344 Gene3D G3DSA:3.90.550.10 19 218 3.4E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39550 77f72f0b5d6d598cd0823e15853da02d 207 Pfam PF00117 Glutamine amidotransferase class-I 8 204 2.2E-20 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c39550 77f72f0b5d6d598cd0823e15853da02d 207 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 206 4.0E-72 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLSA_c39550 77f72f0b5d6d598cd0823e15853da02d 207 PIRSF PIRSF000495 4 207 1.0E-71 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLSA_c39550 77f72f0b5d6d598cd0823e15853da02d 207 Gene3D G3DSA:3.40.50.880 1 207 2.5E-74 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c39550 77f72f0b5d6d598cd0823e15853da02d 207 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 207 35.79 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLSA_c39550 77f72f0b5d6d598cd0823e15853da02d 207 SUPERFAMILY SSF52317 5 206 2.47E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 Gene3D G3DSA:3.40.50.2000 2 179 5.1E-60 T 12-10-2018 CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 Gene3D G3DSA:3.40.50.2000 180 340 2.8E-36 T 12-10-2018 CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 355 28.996 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 SUPERFAMILY SSF53756 5 353 1.35E-91 T 12-10-2018 CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 141 6.4E-41 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 341 4.9E-79 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c39920 cd5c6f13cd878036c97859b8a05877a4 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 342 4.6E-31 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CLSA_c00710 0cb79ec7e5089e86b01acf7a61c7acd1 539 Gene3D G3DSA:1.10.510.10 239 327 1.9E-5 T 12-10-2018 CLSA_c00710 0cb79ec7e5089e86b01acf7a61c7acd1 539 SUPERFAMILY SSF56112 76 295 1.22E-22 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c00710 0cb79ec7e5089e86b01acf7a61c7acd1 539 Pfam PF03109 ABC1 family 94 210 1.2E-27 T 12-10-2018 IPR004147 UbiB domain CLSA_c34590 24b141e8e0ed8acc35131d014e11528f 127 SUPERFAMILY SSF54593 1 126 6.18E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c34590 24b141e8e0ed8acc35131d014e11528f 127 Gene3D G3DSA:3.10.180.10 1 127 1.7E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c34590 24b141e8e0ed8acc35131d014e11528f 127 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 108 5.7E-12 T 12-10-2018 CLSA_c16380 9b7873a7b0a61ad55eef29947c8ff7a8 403 Pfam PF13533 Biotin-lipoyl like 63 107 2.6E-9 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLSA_c16380 9b7873a7b0a61ad55eef29947c8ff7a8 403 SUPERFAMILY SSF111369 54 144 2.09E-6 T 12-10-2018 CLSA_c16380 9b7873a7b0a61ad55eef29947c8ff7a8 403 Pfam PF13437 HlyD family secretion protein 224 313 1.5E-8 T 12-10-2018 CLSA_c17590 5a98e39c3a1f3844f22abdf9fc4e251d 439 Gene3D G3DSA:3.30.70.1380 290 380 1.3E-17 T 12-10-2018 CLSA_c17590 5a98e39c3a1f3844f22abdf9fc4e251d 439 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 430 1.4E-110 T 12-10-2018 IPR002822 Nickel insertion protein CLSA_c17590 5a98e39c3a1f3844f22abdf9fc4e251d 439 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 1 439 42.147 T 12-10-2018 IPR002822 Nickel insertion protein CLSA_c17590 5a98e39c3a1f3844f22abdf9fc4e251d 439 Pfam PF01969 Protein of unknown function DUF111 4 430 6.5E-156 T 12-10-2018 IPR002822 Nickel insertion protein CLSA_c03180 27bfc59bd57d83502f586010f2f38552 216 Gene3D G3DSA:2.60.120.10 11 116 1.1E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c03180 27bfc59bd57d83502f586010f2f38552 216 Pfam PF05962 HutD 11 130 1.4E-16 T 12-10-2018 IPR010282 Uncharacterised protein family HutD/Ves CLSA_c03180 27bfc59bd57d83502f586010f2f38552 216 SUPERFAMILY SSF51182 4 178 3.29E-28 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c04820 324a9d9899c3ee293e4f971097029b47 373 Gene3D G3DSA:3.40.50.2000 1 181 2.9E-8 T 12-10-2018 CLSA_c04820 324a9d9899c3ee293e4f971097029b47 373 SUPERFAMILY SSF53756 11 372 4.89E-74 T 12-10-2018 CLSA_c04820 324a9d9899c3ee293e4f971097029b47 373 Gene3D G3DSA:3.40.50.2000 182 371 1.3E-44 T 12-10-2018 CLSA_c04820 324a9d9899c3ee293e4f971097029b47 373 Pfam PF00534 Glycosyl transferases group 1 193 339 2.8E-38 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c04820 324a9d9899c3ee293e4f971097029b47 373 Pfam PF13439 Glycosyltransferase Family 4 17 167 4.4E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c07360 3c8aaf5802c5b4482eb8c97d2c125579 436 Gene3D G3DSA:3.20.20.540 46 363 2.0E-136 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLSA_c07360 3c8aaf5802c5b4482eb8c97d2c125579 436 Pfam PF01964 Radical SAM ThiC family 5 422 2.1E-194 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLSA_c07360 3c8aaf5802c5b4482eb8c97d2c125579 436 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 423 8.5E-180 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLSA_c07360 3c8aaf5802c5b4482eb8c97d2c125579 436 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 427 86.57 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 313 24.077 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 Pfam PF11734 TilS substrate C-terminal domain 390 459 3.6E-19 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 SMART SM00977 390 462 6.5E-32 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 Gene3D G3DSA:3.40.50.620 1 211 9.8E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 SUPERFAMILY SSF56037 379 464 5.75E-25 T 12-10-2018 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 SUPERFAMILY SSF52402 8 234 3.49E-55 T 12-10-2018 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 SUPERFAMILY SSF82829 214 318 3.66E-13 T 12-10-2018 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 205 7.6E-60 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 Pfam PF01171 PP-loop family 20 200 3.1E-53 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CLSA_c01360 d5e7a5e6ddc7948ad153dd0f4f05a1d3 469 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 390 436 1.7E-20 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLSA_c01370 3713c1d9ddf84ef577271189c30b6155 179 SUPERFAMILY SSF53271 3 178 3.15E-57 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c01370 3713c1d9ddf84ef577271189c30b6155 179 Pfam PF00156 Phosphoribosyl transferase domain 10 159 2.4E-26 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c01370 3713c1d9ddf84ef577271189c30b6155 179 Gene3D G3DSA:3.40.50.2020 1 179 8.1E-66 T 12-10-2018 CLSA_c01370 3713c1d9ddf84ef577271189c30b6155 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 2.7E-65 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CLSA_c00920 89efd50d49bd4bace57d6f15a6f60d38 329 SUPERFAMILY SSF51735 1 328 2.33E-98 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c00920 89efd50d49bd4bace57d6f15a6f60d38 329 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 326 3.4E-133 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLSA_c00920 89efd50d49bd4bace57d6f15a6f60d38 329 Gene3D G3DSA:3.40.50.720 3 252 5.4E-128 T 12-10-2018 CLSA_c00920 89efd50d49bd4bace57d6f15a6f60d38 329 Gene3D G3DSA:3.90.25.10 173 305 5.4E-128 T 12-10-2018 CLSA_c00920 89efd50d49bd4bace57d6f15a6f60d38 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 4.0E-61 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CLSA_c45520 1ef56a651c66ee005789c15da4f68204 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.168 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45520 1ef56a651c66ee005789c15da4f68204 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c45520 1ef56a651c66ee005789c15da4f68204 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-10 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45520 1ef56a651c66ee005789c15da4f68204 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 4 44 1.8E-18 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45520 1ef56a651c66ee005789c15da4f68204 44 Pfam PF00468 Ribosomal protein L34 2 44 5.8E-22 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10610 ae9c8ca2508fe311de114e87188f2560 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 169 201 2.0E-4 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c10610 ae9c8ca2508fe311de114e87188f2560 244 Gene3D G3DSA:2.160.10.10 49 234 4.3E-39 T 12-10-2018 CLSA_c10610 ae9c8ca2508fe311de114e87188f2560 244 SUPERFAMILY SSF51161 83 219 1.33E-34 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 SUPERFAMILY SSF46785 1 87 8.39E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 Gene3D G3DSA:1.10.10.10 1 91 1.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 SUPERFAMILY SSF53850 91 285 2.05E-29 T 12-10-2018 CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 Pfam PF03466 LysR substrate binding domain 87 285 6.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36900 66a9ee90e3e61e19f66b95579b7eb1c8 288 Gene3D G3DSA:3.40.190.290 92 288 7.3E-36 T 12-10-2018 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 SUPERFAMILY SSF47384 181 263 3.34E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 Gene3D G3DSA:3.30.450.20 50 170 2.2E-24 T 12-10-2018 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 5.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 369 5.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 5.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 5.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 SMART SM00091 61 126 5.9E-6 T 12-10-2018 IPR000014 PAS domain CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 Pfam PF13426 PAS domain 72 174 3.3E-12 T 12-10-2018 IPR000014 PAS domain CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 SMART SM00388 192 262 4.9E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 414 1.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 SUPERFAMILY SSF55874 251 417 1.83E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 Gene3D G3DSA:3.30.565.10 264 420 4.5E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 262 1.2E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 SMART SM00387 308 416 2.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 58 182 4.4E-23 T 12-10-2018 IPR000014 PAS domain CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 SUPERFAMILY SSF55785 48 173 2.44E-21 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c18990 15a9048c00e0d8c1b589f9580c298670 450 Gene3D G3DSA:1.10.287.130 171 263 5.3E-20 T 12-10-2018 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 Gene3D G3DSA:3.40.50.10300 184 393 1.3E-78 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 365 3.7E-71 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 SUPERFAMILY SSF102645 181 391 3.27E-73 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 SUPERFAMILY SSF52507 2 176 1.83E-59 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 389 2.0E-144 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 Gene3D G3DSA:3.40.50.1950 1 183 4.7E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CLSA_c13640 c1400b3deb905cc10c2b63cab7f32892 393 Pfam PF02441 Flavoprotein 3 177 5.3E-47 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLSA_c02270 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02270 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02270 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02270 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 12-10-2018 CLSA_c02270 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02270 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c18860 ee14774d43f8c13737c1f6860d63d18c 414 Gene3D G3DSA:1.10.3430.10 1 412 3.2E-144 T 12-10-2018 IPR029020 Ammonium/urea transporter CLSA_c18860 ee14774d43f8c13737c1f6860d63d18c 414 TIGRFAM TIGR00836 amt: ammonium transporter 7 407 5.7E-140 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CLSA_c18860 ee14774d43f8c13737c1f6860d63d18c 414 SUPERFAMILY SSF111352 4 388 1.18E-123 T 12-10-2018 CLSA_c18860 ee14774d43f8c13737c1f6860d63d18c 414 Pfam PF00909 Ammonium Transporter Family 10 407 5.1E-126 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CLSA_c18860 ee14774d43f8c13737c1f6860d63d18c 414 ProSitePatterns PS01219 Ammonium transporters signature. 161 186 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Pfam PF00005 ABC transporter 790 860 4.2E-5 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.859 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Gene3D G3DSA:3.30.190.20 131 243 6.9E-251 T 12-10-2018 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Gene3D G3DSA:1.20.1580.10 91 494 6.9E-251 T 12-10-2018 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Gene3D G3DSA:3.40.50.300 6 597 6.9E-251 T 12-10-2018 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 SMART SM00382 633 908 0.009 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 SUPERFAMILY SSF52540 10 571 9.61E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Gene3D G3DSA:3.40.50.300 614 936 1.3E-143 T 12-10-2018 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Gene3D G3DSA:1.10.8.280 286 405 6.9E-251 T 12-10-2018 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 Gene3D G3DSA:1.20.1580.10 693 830 1.3E-143 T 12-10-2018 CLSA_c43030 14c8ce7ec13b45bb8ed4df5ae48a062d 941 SUPERFAMILY SSF52540 618 913 1.17E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Gene3D G3DSA:2.40.30.10 286 405 4.2E-10 T 12-10-2018 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Pfam PF03764 Elongation factor G, domain IV 499 592 4.8E-19 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SUPERFAMILY SSF54980 596 678 5.76E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Gene3D G3DSA:3.30.230.10 501 678 1.2E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SUPERFAMILY SSF54980 407 481 1.19E-10 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Pfam PF00679 Elongation factor G C-terminus 596 678 3.0E-16 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SUPERFAMILY SSF52540 3 251 9.14E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SMART SM00889 480 594 1.8E-21 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Gene3D G3DSA:3.40.50.300 3 268 7.3E-67 T 12-10-2018 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SUPERFAMILY SSF50447 281 402 2.05E-9 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SMART SM00838 596 681 0.0045 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Gene3D G3DSA:3.30.70.240 600 670 1.2E-36 T 12-10-2018 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Pfam PF00009 Elongation factor Tu GTP binding domain 4 253 3.2E-50 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 Gene3D G3DSA:3.30.70.870 419 483 4.8E-7 T 12-10-2018 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 150 1.4E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 PRINTS PR00315 GTP-binding elongation factor signature 122 131 2.7E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 PRINTS PR00315 GTP-binding elongation factor signature 4 17 2.7E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 PRINTS PR00315 GTP-binding elongation factor signature 86 97 2.7E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 PRINTS PR00315 GTP-binding elongation factor signature 50 58 2.7E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 PRINTS PR00315 GTP-binding elongation factor signature 70 80 2.7E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c15510 26f1873d5af1de42638adcf8c2aa9d45 724 SUPERFAMILY SSF54211 480 592 1.67E-25 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 206 235 4.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 100 129 4.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 177 204 4.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 SUPERFAMILY SSF58104 50 330 2.22E-61 T 12-10-2018 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 Gene3D G3DSA:1.20.120.30 338 457 6.1E-5 T 12-10-2018 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 151 305 9.0E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 Gene3D G3DSA:1.10.287.950 21 326 1.2E-57 T 12-10-2018 CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 Pfam PF13682 Chemoreceptor zinc-binding domain 356 422 4.3E-13 T 12-10-2018 IPR025991 Chemoreceptor zinc-binding domain CLSA_c35330 886c5817c2a1c4647f4604b8e59fe310 459 SMART SM00283 79 338 2.0E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c34860 fa88694e9bd9e27b2dcfc9881c2a15cc 299 Gene3D G3DSA:3.20.20.60 1 290 3.3E-91 T 12-10-2018 CLSA_c34860 fa88694e9bd9e27b2dcfc9881c2a15cc 299 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 289 2.0E-147 T 12-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CLSA_c34860 fa88694e9bd9e27b2dcfc9881c2a15cc 299 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 6.7E-78 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CLSA_c34860 fa88694e9bd9e27b2dcfc9881c2a15cc 299 SUPERFAMILY SSF51621 2 235 4.71E-64 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c34860 fa88694e9bd9e27b2dcfc9881c2a15cc 299 PIRSF PIRSF015582 1 297 1.1E-82 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 290 2.2E-15 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-13 T 12-10-2018 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.6E-13 T 12-10-2018 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 1.6E-13 T 12-10-2018 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 1.6E-13 T 12-10-2018 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.6E-13 T 12-10-2018 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 Gene3D G3DSA:3.50.50.60 6 290 3.9E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.1E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 1.1E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 1.1E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 1.1E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.1E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 278 296 1.1E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 SUPERFAMILY SSF51905 1 316 7.03E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c04700 2278e72ac3adbaa7054dc5c252704937 319 Gene3D G3DSA:3.50.50.60 123 248 3.9E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c08640 e62a4cc94b40b9de5e64d6ba0660ae48 311 SUPERFAMILY SSF53187 30 308 2.15E-56 T 12-10-2018 CLSA_c08640 e62a4cc94b40b9de5e64d6ba0660ae48 311 Gene3D G3DSA:3.40.630.10 26 310 2.8E-67 T 12-10-2018 CLSA_c08640 e62a4cc94b40b9de5e64d6ba0660ae48 311 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 33 306 2.1E-32 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 CLSA_c25080 e964bf68861d3f4a1a0ae9ada9ce9372 386 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 264 338 7.5E-12 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal CLSA_c25080 e964bf68861d3f4a1a0ae9ada9ce9372 386 Pfam PF01385 Probable transposase 175 298 2.5E-14 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLSA_c25080 e964bf68861d3f4a1a0ae9ada9ce9372 386 Pfam PF07282 Putative transposase DNA-binding domain 311 379 3.0E-18 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal CLSA_c25080 e964bf68861d3f4a1a0ae9ada9ce9372 386 Pfam PF12323 Helix-turn-helix domain 2 46 4.6E-18 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 Gene3D G3DSA:3.40.50.1100 89 437 5.8E-130 T 12-10-2018 CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 SUPERFAMILY SSF53686 1 481 7.78E-136 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 Pfam PF14821 Threonine synthase N terminus 2 78 8.3E-21 T 12-10-2018 IPR029144 Threonine synthase, N-terminal CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 412 2.7E-14 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 Gene3D G3DSA:3.90.1380.10 1 88 3.5E-20 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 TIGRFAM TIGR00260 thrC: threonine synthase 91 429 6.1E-75 T 12-10-2018 IPR004450 Threonine synthase-like CLSA_c31520 b41b8b11e1d6e6d6c1707612f492a699 485 Gene3D G3DSA:3.40.50.1100 98 220 5.8E-130 T 12-10-2018 CLSA_c40050 e33b062d18e701a3714bb17ca0adc1f7 137 Pfam PF01475 Ferric uptake regulator family 10 126 4.2E-23 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLSA_c40050 e33b062d18e701a3714bb17ca0adc1f7 137 Gene3D G3DSA:3.30.1490.190 82 137 1.9E-10 T 12-10-2018 CLSA_c40050 e33b062d18e701a3714bb17ca0adc1f7 137 SUPERFAMILY SSF46785 2 132 4.35E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c40050 e33b062d18e701a3714bb17ca0adc1f7 137 Gene3D G3DSA:1.10.10.10 1 81 2.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 Gene3D G3DSA:2.40.50.140 147 213 4.2E-6 T 12-10-2018 CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 Gene3D G3DSA:1.10.10.10 216 278 5.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 PIRSF PIRSF012524 1 278 5.8E-84 T 12-10-2018 IPR014464 Conserved virulence factor B CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 Pfam PF13509 S1 domain 4 65 2.8E-22 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 Pfam PF13509 S1 domain 71 131 1.8E-6 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 SMART SM00316 3 65 1.1 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 SMART SM00316 70 131 1.2 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 SMART SM00316 145 208 1.2 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c12780 33790a7ec4535ca4f3ec15a64e3a829f 278 SUPERFAMILY SSF50249 143 213 2.17E-7 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 1.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 1.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 1.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 1.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 Pfam PF01047 MarR family 53 107 7.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 SMART SM00347 43 143 3.2E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 SUPERFAMILY SSF46785 30 158 3.03E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c02850 475db52a3742a4e9031650c5b5e0579d 161 Gene3D G3DSA:1.10.10.10 12 160 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c16670 cc69c61676118d57afa690c7005c94a9 72 Pfam PF11148 Protein of unknown function (DUF2922) 4 69 7.4E-22 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 CLSA_c19480 635314575faed416e8904025b1b10309 141 Gene3D G3DSA:3.30.428.10 11 141 1.2E-34 T 12-10-2018 IPR036265 HIT-like superfamily CLSA_c19480 635314575faed416e8904025b1b10309 141 Pfam PF01230 HIT domain 33 106 5.6E-10 T 12-10-2018 IPR001310 Histidine triad (HIT) protein CLSA_c19480 635314575faed416e8904025b1b10309 141 SUPERFAMILY SSF54197 4 138 1.38E-31 T 12-10-2018 IPR036265 HIT-like superfamily CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 Gene3D G3DSA:1.10.1660.10 2 61 9.4E-11 T 12-10-2018 CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 Gene3D G3DSA:3.40.50.1390 62 161 2.2E-26 T 12-10-2018 CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 SUPERFAMILY SSF53041 62 192 4.32E-22 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 SMART SM00857 63 200 8.5E-22 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 Pfam PF13411 MerR HTH family regulatory protein 7 53 1.5E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 SUPERFAMILY SSF46955 7 88 4.4E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c09280 cb722ab633d3891dce055828dc0d167f 207 Pfam PF00239 Resolvase, N terminal domain 63 181 6.6E-18 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c43290 4611994eb258f1116cd8f988fb76c9b4 393 Gene3D G3DSA:3.90.1150.10 276 393 1.3E-44 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c43290 4611994eb258f1116cd8f988fb76c9b4 393 PIRSF PIRSF000390 1 393 2.1E-121 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c43290 4611994eb258f1116cd8f988fb76c9b4 393 Gene3D G3DSA:3.40.640.10 1 273 1.9E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c43290 4611994eb258f1116cd8f988fb76c9b4 393 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 391 8.1E-134 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c43290 4611994eb258f1116cd8f988fb76c9b4 393 SUPERFAMILY SSF53383 15 393 1.48E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 PIRSF PIRSF005023 1 639 1.4E-257 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 Gene3D G3DSA:3.40.50.2030 244 421 7.3E-52 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 SUPERFAMILY SSF56821 4 638 9.31E-184 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 14 638 2.2E-278 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 Gene3D G3DSA:3.40.50.2030 422 635 4.2E-77 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 Pfam PF03063 Prismane/CO dehydrogenase family 54 618 9.9E-137 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c11710 abba90e5213a76b77352b47f647ebc2c 639 Gene3D G3DSA:1.20.1270.30 69 243 8.1E-48 T 12-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 SMART SM00861 280 443 1.5E-28 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 SUPERFAMILY SSF52518 278 463 3.07E-35 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Pfam PF02780 Transketolase, C-terminal domain 456 574 2.3E-18 T 12-10-2018 IPR033248 Transketolase, C-terminal domain CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Gene3D G3DSA:3.40.50.920 456 579 5.0E-22 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 SUPERFAMILY SSF52518 3 342 1.28E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Gene3D G3DSA:3.40.50.970 277 451 1.6E-44 T 12-10-2018 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 SUPERFAMILY SSF52922 452 578 5.89E-24 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 199 7.5E-79 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 200 244 5.6E-6 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Pfam PF02779 Transketolase, pyrimidine binding domain 288 440 1.2E-18 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c17970 6a8240e6843ce8e9e0af960a2387d7b8 579 Gene3D G3DSA:3.40.50.970 1 253 7.7E-73 T 12-10-2018 CLSA_c03040 9eeef77ad2c032f96dd36e956d133c3e 293 SUPERFAMILY SSF52540 4 222 1.2E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c03040 9eeef77ad2c032f96dd36e956d133c3e 293 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c03040 9eeef77ad2c032f96dd36e956d133c3e 293 Pfam PF00005 ABC transporter 20 158 2.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c03040 9eeef77ad2c032f96dd36e956d133c3e 293 SMART SM00382 28 206 8.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c03040 9eeef77ad2c032f96dd36e956d133c3e 293 Gene3D G3DSA:3.40.50.300 1 266 1.3E-56 T 12-10-2018 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 SUPERFAMILY SSF46785 2 109 4.64E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 Gene3D G3DSA:3.40.190.10 89 280 1.3E-44 T 12-10-2018 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 Gene3D G3DSA:1.10.10.10 1 88 7.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 Gene3D G3DSA:3.40.190.10 158 258 1.3E-44 T 12-10-2018 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 Pfam PF03466 LysR substrate binding domain 86 285 1.5E-38 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 SUPERFAMILY SSF53850 88 288 5.43E-36 T 12-10-2018 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c00970 1c4326d213d652bc6cad745101196f8e 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 1.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 Pfam PF00347 Ribosomal protein L6 11 83 1.1E-21 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 Pfam PF00347 Ribosomal protein L6 91 165 8.5E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 Gene3D G3DSA:3.90.930.12 1 83 9.0E-31 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 2.6E-75 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 SUPERFAMILY SSF56053 1 83 1.18E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 Gene3D G3DSA:3.90.930.12 84 179 2.6E-40 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 PIRSF PIRSF002162 1 178 8.0E-48 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 4.7E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 PRINTS PR00059 Ribosomal protein L6 signature 142 163 4.7E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 PRINTS PR00059 Ribosomal protein L6 signature 100 116 4.7E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.175 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLSA_c02170 f4fd9c091f758824dadd212e005a311b 180 SUPERFAMILY SSF56053 84 178 3.17E-35 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 PRINTS PR00988 Uridine kinase signature 148 159 7.1E-35 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 PRINTS PR00988 Uridine kinase signature 170 183 7.1E-35 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 PRINTS PR00988 Uridine kinase signature 134 144 7.1E-35 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 PRINTS PR00988 Uridine kinase signature 78 93 7.1E-35 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 PRINTS PR00988 Uridine kinase signature 4 21 7.1E-35 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 PRINTS PR00988 Uridine kinase signature 33 44 7.1E-35 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 Hamap MF_00551 Uridine kinase [udk]. 1 204 39.811 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 190 4.2E-46 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 Gene3D G3DSA:3.40.50.300 2 207 1.6E-67 T 12-10-2018 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 TIGRFAM TIGR00235 udk: uridine kinase 3 203 1.7E-83 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CLSA_c28220 53dcaf327d03ba963c9a2b3965488352 207 SUPERFAMILY SSF52540 6 195 1.47E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c45270 110e7469485e33a7d73f81a579829616 446 SUPERFAMILY SSF48024 6 119 1.96E-35 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CLSA_c45270 110e7469485e33a7d73f81a579829616 446 Pfam PF03796 DnaB-like helicase C terminal domain 184 439 8.4E-117 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CLSA_c45270 110e7469485e33a7d73f81a579829616 446 Gene3D G3DSA:1.10.860.10 4 165 2.2E-54 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLSA_c45270 110e7469485e33a7d73f81a579829616 446 Gene3D G3DSA:3.40.50.300 167 444 2.3E-113 T 12-10-2018 CLSA_c45270 110e7469485e33a7d73f81a579829616 446 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 440 4.1E-179 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CLSA_c45270 110e7469485e33a7d73f81a579829616 446 SMART SM00382 201 405 8.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c45270 110e7469485e33a7d73f81a579829616 446 SUPERFAMILY SSF52540 182 432 1.69E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c45270 110e7469485e33a7d73f81a579829616 446 Pfam PF00772 DnaB-like helicase N terminal domain 9 110 7.0E-33 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 SUPERFAMILY SSF51230 77 150 4.84E-18 T 12-10-2018 IPR011053 Single hybrid motif CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 Gene3D G3DSA:2.40.50.100 72 150 2.1E-22 T 12-10-2018 CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 Pfam PF00364 Biotin-requiring enzyme 78 150 2.0E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 6.7E-6 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 6.7E-6 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c30860 7c38d4cf9a3b30082a6653ec214f4029 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 6.7E-6 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 8.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 8.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 8.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 8.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 SMART SM00347 25 125 7.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 SUPERFAMILY SSF46785 13 140 2.14E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 Pfam PF01047 MarR family 39 89 1.5E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24250 1555aa214283fc57dc74120b7c8b2390 146 Gene3D G3DSA:1.10.10.10 10 142 2.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 Gene3D G3DSA:3.30.390.10 5 130 5.8E-54 T 12-10-2018 IPR029017 Enolase-like, N-terminal CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 Gene3D G3DSA:3.20.20.120 131 431 5.8E-140 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 SMART SM01193 7 137 1.5E-92 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 7 428 6.7E-215 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PIRSF PIRSF001400 3 428 3.3E-193 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 Hamap MF_00318 Enolase [eno]. 5 414 45.702 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 Pfam PF03952 Enolase, N-terminal domain 7 137 2.6E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 SUPERFAMILY SSF54826 6 141 1.69E-56 T 12-10-2018 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 426 2.1E-138 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 SMART SM01192 142 428 2.1E-230 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 SUPERFAMILY SSF51604 141 428 1.27E-133 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PRINTS PR00148 Enolase signature 164 177 6.2E-48 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PRINTS PR00148 Enolase signature 314 325 6.2E-48 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PRINTS PR00148 Enolase signature 337 351 6.2E-48 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PRINTS PR00148 Enolase signature 366 383 6.2E-48 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PRINTS PR00148 Enolase signature 110 126 6.2E-48 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40370 b96799ad6189709b66b49c2a06ee29c8 431 PRINTS PR00148 Enolase signature 40 54 6.2E-48 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 153 791 40.701 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 PIRSF PIRSF000463 70 800 1.4E-268 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Gene3D G3DSA:2.60.40.1180 688 792 1.7E-33 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 692 790 1.1E-22 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Pfam PF00128 Alpha amylase, catalytic domain 333 412 1.8E-9 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 SUPERFAMILY SSF51445 244 680 3.26E-103 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Gene3D G3DSA:3.20.20.80 286 686 9.1E-156 T 12-10-2018 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 SUPERFAMILY SSF81296 196 270 6.58E-5 T 12-10-2018 IPR014756 Immunoglobulin E-set CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 SMART SM00642 313 668 3.1E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 185 269 1.3E-15 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 170 789 1.1E-250 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 Gene3D G3DSA:2.60.40.10 105 283 4.0E-36 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c43820 8c23f28a9173c873bf4f47fcc5e8e302 806 SUPERFAMILY SSF51011 688 791 2.84E-30 T 12-10-2018 CLSA_c28480 e500b852784c8fb1e17c063002e4e9f2 293 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 288 2.1E-88 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CLSA_c28480 e500b852784c8fb1e17c063002e4e9f2 293 Gene3D G3DSA:3.90.25.10 171 284 3.9E-101 T 12-10-2018 CLSA_c28480 e500b852784c8fb1e17c063002e4e9f2 293 Pfam PF04321 RmlD substrate binding domain 1 291 6.6E-93 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CLSA_c28480 e500b852784c8fb1e17c063002e4e9f2 293 SUPERFAMILY SSF51735 1 289 1.69E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c28480 e500b852784c8fb1e17c063002e4e9f2 293 Gene3D G3DSA:3.40.50.720 3 278 3.9E-101 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF00668 Condensation domain 1056 1484 4.0E-106 T 12-10-2018 IPR001242 Condensation domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF00668 Condensation domain 6 445 4.3E-69 T 12-10-2018 IPR001242 Condensation domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:1.10.1200.10 1999 2077 3.2E-18 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:1.10.1200.10 960 1039 1.8E-21 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF52777 11 185 9.78E-24 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.40.50.12780 452 857 9.3E-126 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.40.50.12780 1490 1896 5.2E-124 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.30.559.10 1060 1414 6.5E-115 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF07993 Male sterility protein 2135 2378 6.2E-46 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.30.559.30 1228 1470 6.5E-115 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 ProSitePatterns PS00012 Phosphopantetheine attachment site. 994 1009 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.30.559.30 198 451 1.8E-27 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF52777 191 429 5.56E-20 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF47336 2001 2069 5.63E-15 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF00550 Phosphopantetheine attachment site 2011 2069 1.5E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF00550 Phosphopantetheine attachment site 975 1035 1.5E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1647 1658 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF51735 2131 2442 1.18E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF52777 1061 1224 7.23E-35 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF00501 AMP-binding enzyme 466 862 2.1E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF00501 AMP-binding enzyme 1505 1901 1.2E-92 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 ProSitePatterns PS00455 Putative AMP-binding domain signature. 608 619 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF56801 1463 2022 1.44E-140 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF13193 AMP-binding enzyme C-terminal domain 871 944 4.8E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Pfam PF13193 AMP-binding enzyme C-terminal domain 1910 1983 2.0E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF47336 963 1035 3.8E-17 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF52777 1234 1468 9.34E-48 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 487 887 5.9E-129 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1526 1926 6.9E-126 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.30.300.30 1897 1998 3.0E-32 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.30.300.30 858 959 4.8E-31 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SMART SM00823 Phosphopantetheine attachment site 2009 2076 0.081 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SMART SM00823 Phosphopantetheine attachment site 975 1039 0.021 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 SUPERFAMILY SSF56801 424 981 5.49E-140 T 12-10-2018 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.30.559.10 11 197 4.2E-20 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c08430 0a524d08c01dc1f4178b0e3a9a97cdb5 2498 Gene3D G3DSA:3.40.50.720 2102 2496 1.7E-82 T 12-10-2018 CLSA_c16120 8e73349709e3dea61784ac8aa74aca74 51 Pfam PF13451 Probable zinc-ribbon domain 2 48 2.0E-27 T 12-10-2018 IPR025306 Probable zinc-binding domain CLSA_c14430 3b86269f4179650bff7579e73352a97c 326 Pfam PF02272 DHHA1 domain 251 320 6.3E-10 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLSA_c14430 3b86269f4179650bff7579e73352a97c 326 Pfam PF01368 DHH family 16 159 4.7E-13 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c14430 3b86269f4179650bff7579e73352a97c 326 Gene3D G3DSA:3.10.310.30 209 325 6.0E-31 T 12-10-2018 CLSA_c14430 3b86269f4179650bff7579e73352a97c 326 SUPERFAMILY SSF64182 15 312 1.31E-64 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily CLSA_c14430 3b86269f4179650bff7579e73352a97c 326 Gene3D G3DSA:3.90.1640.10 2 208 1.9E-58 T 12-10-2018 CLSA_c01730 7def2526833f944cdcbb649f36b34f1d 76 SUPERFAMILY SSF52833 1 74 2.71E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c01730 7def2526833f944cdcbb649f36b34f1d 76 TIGRFAM TIGR02196 GlrX_YruB: glutaredoxin-like protein, YruB-family 1 73 1.9E-30 T 12-10-2018 IPR011911 Glutaredoxin-like protein, YruB CLSA_c01730 7def2526833f944cdcbb649f36b34f1d 76 Pfam PF00462 Glutaredoxin 2 60 1.7E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CLSA_c01730 7def2526833f944cdcbb649f36b34f1d 76 ProSitePatterns PS00195 Glutaredoxin active site. 4 20 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CLSA_c01730 7def2526833f944cdcbb649f36b34f1d 76 Gene3D G3DSA:3.40.30.10 1 74 8.9E-24 T 12-10-2018 CLSA_c21150 5ad539ab07dfd0fd714598baf0988e04 417 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 130 376 1.3E-58 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 CLSA_c35730 90bc3cf247eb596941f2dc5b726f274b 125 Gene3D G3DSA:1.10.260.40 1 117 1.2E-20 T 12-10-2018 CLSA_c35730 90bc3cf247eb596941f2dc5b726f274b 125 SUPERFAMILY SSF47413 2 66 1.85E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c35730 90bc3cf247eb596941f2dc5b726f274b 125 SMART SM00530 5 60 1.0E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c35730 90bc3cf247eb596941f2dc5b726f274b 125 Pfam PF01381 Helix-turn-helix 6 60 4.0E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 Pfam PF14310 Fibronectin type III-like domain 619 687 2.7E-12 T 12-10-2018 IPR026891 Fibronectin type III-like domain CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 SUPERFAMILY SSF52279 346 585 1.96E-49 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 51 306 1.1E-46 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 SMART SM01217 619 688 1.6E-12 T 12-10-2018 IPR026891 Fibronectin type III-like domain CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 Gene3D G3DSA:3.40.50.1700 331 585 3.9E-69 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 Gene3D G3DSA:3.20.20.300 11 327 1.5E-95 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 SUPERFAMILY SSF51445 10 345 8.21E-87 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 PRINTS PR00133 Glycosyl hydrolase family 3 signature 65 84 7.3E-9 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 PRINTS PR00133 Glycosyl hydrolase family 3 signature 230 248 7.3E-9 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 PRINTS PR00133 Glycosyl hydrolase family 3 signature 159 175 7.3E-9 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 Gene3D G3DSA:2.60.40.10 587 703 1.7E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c36750 cf2f2fb47f2c6dbb765438d0d2f32a53 709 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 346 583 3.0E-56 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 4.9E-112 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 SUPERFAMILY SSF53901 3 270 2.36E-97 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 3.6E-157 T 12-10-2018 IPR002155 Thiolase GO:0016747 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 Gene3D G3DSA:3.40.47.10 6 276 6.3E-164 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 SUPERFAMILY SSF53901 271 392 1.87E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 PIRSF PIRSF000429 1 393 7.3E-140 T 12-10-2018 IPR002155 Thiolase GO:0016747 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 Gene3D G3DSA:3.40.47.10 126 390 6.3E-164 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c05080 4c6f6ce5fb303b46181c4bf5f485ab42 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 4.4E-52 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CLSA_c00910 bb42305e97bd1d693ff0ff992c3a9c27 216 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 3 201 7.0E-62 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLSA_c00910 bb42305e97bd1d693ff0ff992c3a9c27 216 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 6 198 1.0E-59 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLSA_c00910 bb42305e97bd1d693ff0ff992c3a9c27 216 SUPERFAMILY SSF50486 3 206 1.8E-65 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CLSA_c00910 bb42305e97bd1d693ff0ff992c3a9c27 216 Gene3D G3DSA:3.10.300.10 1 211 2.5E-72 T 12-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLSA_c00910 bb42305e97bd1d693ff0ff992c3a9c27 216 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 5 201 32.997 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 Gene3D G3DSA:3.40.190.10 140 233 6.7E-74 T 12-10-2018 CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 75 88 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 Gene3D G3DSA:3.40.190.10 47 261 6.7E-74 T 12-10-2018 CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 265 4.0E-59 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 SMART SM00062 49 270 1.6E-55 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 SUPERFAMILY SSF53850 7 263 3.63E-66 T 12-10-2018 CLSA_c42650 657ff5e36aac398047007abed2ef21f2 275 SMART SM00079 49 269 0.0072 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 388 449 1.7E-8 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 251 324 1.1E-28 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 SUPERFAMILY SSF101386 361 460 2.99E-23 T 12-10-2018 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 205 2.2E-23 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 Gene3D G3DSA:3.40.1010.10 1 118 5.4E-10 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 Gene3D G3DSA:1.10.287.1080 225 349 2.0E-40 T 12-10-2018 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 TIGRFAM TIGR00444 mazG: MazG family protein 235 480 4.3E-91 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 Gene3D G3DSA:1.10.287.1080 356 483 9.9E-39 T 12-10-2018 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 PIRSF PIRSF002845 1 483 1.7E-216 T 12-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 SUPERFAMILY SSF53790 1 253 7.12E-29 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c01180 080be0126751ab6887967695d1df6cd0 483 SUPERFAMILY SSF101386 227 326 1.47E-24 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Gene3D G3DSA:3.30.70.20 222 269 1.6E-139 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 224 235 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 SUPERFAMILY SSF54862 193 274 1.96E-19 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Gene3D G3DSA:3.40.950.10 336 571 1.6E-139 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 287 577 4.1E-85 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Gene3D G3DSA:3.10.20.600 29 108 1.7E-10 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 SMART SM00902 584 643 5.9E-23 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 SUPERFAMILY SSF142984 34 100 3.66E-11 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Gene3D G3DSA:3.40.50.1780 270 580 1.6E-139 T 12-10-2018 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Pfam PF10531 SLBB domain 37 74 2.5E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Pfam PF00037 4Fe-4S binding domain 249 270 2.1E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 221 581 2.8E-128 T 12-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 254 265 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Gene3D G3DSA:4.10.260.20 583 648 1.5E-17 T 12-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 Pfam PF02256 Iron hydrogenase small subunit 588 642 6.9E-20 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit CLSA_c23760 3d2e31b572d55f121c499eb55f8878c6 649 SUPERFAMILY SSF53920 253 640 1.7E-119 T 12-10-2018 IPR009016 Iron hydrogenase CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 Gene3D G3DSA:3.30.450.20 55 271 1.1E-42 T 12-10-2018 CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 Gene3D G3DSA:1.10.287.950 354 663 3.0E-51 T 12-10-2018 CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 444 615 3.6E-29 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 SUPERFAMILY SSF103190 63 183 1.36E-14 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 SUPERFAMILY SSF58104 327 663 1.7E-51 T 12-10-2018 CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 SMART SM00283 380 663 1.4E-23 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 Gene3D G3DSA:3.30.450.20 63 174 1.1E-42 T 12-10-2018 CLSA_c18760 f12372007be469cb9ec31b4b1b6e3fc0 664 Pfam PF02743 Cache domain 48 263 3.1E-30 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 197 352 6.5E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Gene3D G3DSA:3.40.50.10050 487 594 1.5E-40 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Gene3D G3DSA:2.40.30.10 595 692 4.8E-34 T 12-10-2018 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 ProSitePatterns PS01176 Initiation factor 2 signature. 644 666 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Gene3D G3DSA:1.10.10.2480 1 70 5.6E-22 T 12-10-2018 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Pfam PF11987 Translation-initiation factor 2 478 583 8.8E-39 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 112 692 1.8E-261 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 691 17.375 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 SUPERFAMILY SSF52540 178 366 2.91E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Gene3D G3DSA:2.40.30.10 365 481 2.0E-42 T 12-10-2018 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 SUPERFAMILY SSF52156 474 600 2.22E-39 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Pfam PF00009 Elongation factor Tu GTP binding domain 197 354 2.4E-33 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 49 1.4E-18 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 119 166 2.1E-13 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 SUPERFAMILY SSF50447 366 448 6.28E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 Gene3D G3DSA:3.40.50.300 190 364 7.7E-72 T 12-10-2018 CLSA_c14410 8abe4850b5365e66fd0aa4024cf7d99f 694 SUPERFAMILY SSF50447 594 691 1.96E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c13570 b2b6825cf624d07a6a5f1be397705da2 492 SUPERFAMILY SSF52540 18 250 3.46E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13570 b2b6825cf624d07a6a5f1be397705da2 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 2 492 3.4E-247 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLSA_c13570 b2b6825cf624d07a6a5f1be397705da2 492 PIRSF PIRSF007466 1 492 5.7E-232 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLSA_c13570 b2b6825cf624d07a6a5f1be397705da2 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 1.1E-229 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLSA_c13570 b2b6825cf624d07a6a5f1be397705da2 492 Gene3D G3DSA:3.40.50.300 10 240 6.9E-11 T 12-10-2018 CLSA_c06260 b3fd7d7d2ea1e313b60f637907e9bb64 307 SUPERFAMILY SSF52540 3 235 3.59E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06260 b3fd7d7d2ea1e313b60f637907e9bb64 307 Gene3D G3DSA:3.40.50.300 2 240 2.1E-59 T 12-10-2018 CLSA_c06260 b3fd7d7d2ea1e313b60f637907e9bb64 307 SMART SM00382 30 253 6.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c06260 b3fd7d7d2ea1e313b60f637907e9bb64 307 Pfam PF00005 ABC transporter 21 162 3.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c06260 b3fd7d7d2ea1e313b60f637907e9bb64 307 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 Gene3D G3DSA:1.10.287.130 196 320 6.6E-19 T 12-10-2018 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 SMART SM00388 258 324 6.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 322 2.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 466 6.0E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 SUPERFAMILY SSF47384 242 324 1.96E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 SUPERFAMILY SSF55874 313 477 2.36E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 Gene3D G3DSA:3.30.565.10 331 478 1.5E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 SMART SM00387 370 479 6.9E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c19720 0e1429bfbe4d9dcf6780d5982450da7b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c14030 55319437df05c19cd2c041d218f56840 270 Pfam PF01351 Ribonuclease HII 87 267 2.4E-36 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain CLSA_c14030 55319437df05c19cd2c041d218f56840 270 Hamap MF_00052_B Ribonuclease HII [rnhB]. 85 268 32.094 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 CLSA_c14030 55319437df05c19cd2c041d218f56840 270 SUPERFAMILY SSF53098 76 266 1.43E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c14030 55319437df05c19cd2c041d218f56840 270 Gene3D G3DSA:3.30.420.10 63 270 9.1E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c17930 1a104337c120118350a04628b4a9918a 262 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 252 1.0E-65 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c17930 1a104337c120118350a04628b4a9918a 262 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 245 4.9E-74 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c17930 1a104337c120118350a04628b4a9918a 262 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 129 141 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c17930 1a104337c120118350a04628b4a9918a 262 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 251 16.2 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 Gene3D G3DSA:3.40.1550.10 34 233 3.7E-49 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 SUPERFAMILY SSF101801 313 394 8.89E-24 T 12-10-2018 IPR036429 SpoA-like superfamily CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 SUPERFAMILY SSF103039 35 226 2.01E-45 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 Pfam PF04509 CheC-like family 42 75 9.2E-11 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 Pfam PF04509 CheC-like family 138 172 2.1E-14 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 316 386 1.9E-24 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 Gene3D G3DSA:2.30.330.10 304 396 2.4E-33 T 12-10-2018 IPR036429 SpoA-like superfamily CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 313 387 3.0E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 333 349 1.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 362 377 1.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 316 332 1.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLSA_c39750 be61071e289ccfd5c0d98da256769bd2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 349 362 1.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 Gene3D G3DSA:3.30.980.10 85 238 3.4E-40 T 12-10-2018 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 SMART SM00863 180 222 4.1E-11 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 180 220 2.2E-7 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 Pfam PF02272 DHHA1 domain 259 391 1.2E-14 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 Pfam PF01411 tRNA synthetases class II (A) 13 85 4.2E-6 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 Gene3D G3DSA:2.40.30.130 1 84 3.2E-28 T 12-10-2018 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 Gene3D G3DSA:3.10.310.40 290 396 5.0E-17 T 12-10-2018 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 SUPERFAMILY SSF55186 88 229 5.49E-27 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CLSA_c42750 faf0fc23bfae3baf101de0db83bb63c1 399 SUPERFAMILY SSF50447 2 72 1.02E-13 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 Gene3D G3DSA:3.10.28.10 1 251 1.9E-62 T 12-10-2018 IPR027434 Homing endonuclease CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 21 106 2.6E-27 T 12-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 Pfam PF02650 WhiA C-terminal HTH domain 225 308 1.3E-38 T 12-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 SUPERFAMILY SSF55608 122 226 2.44E-19 T 12-10-2018 IPR027434 Homing endonuclease CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 311 34.22 T 12-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 309 1.0E-117 T 12-10-2018 IPR033981 Sporulation regulator WhiA-like CLSA_c42940 a626666eaba967ea07cd35b2fba05d80 315 Pfam PF14527 WhiA LAGLIDADG-like domain 131 222 1.4E-37 T 12-10-2018 IPR039518 WhiA, LAGLIDADG-like domain CLSA_c24180 a783cfe08fe910cf4a76dc0b78d6d0a2 166 Gene3D G3DSA:2.30.30.40 21 146 7.8E-42 T 12-10-2018 CLSA_c24180 a783cfe08fe910cf4a76dc0b78d6d0a2 166 SUPERFAMILY SSF50341 18 156 1.12E-38 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c24180 a783cfe08fe910cf4a76dc0b78d6d0a2 166 SMART SM00260 15 152 2.9E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c24180 a783cfe08fe910cf4a76dc0b78d6d0a2 166 Gene3D G3DSA:2.40.50.180 38 147 7.8E-42 T 12-10-2018 CLSA_c24180 a783cfe08fe910cf4a76dc0b78d6d0a2 166 Pfam PF01584 CheW-like domain 20 154 1.2E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 5.5E-107 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 85 5.1E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 278 6.1E-108 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 39.82 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 Gene3D G3DSA:3.40.50.620 1 177 2.5E-76 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 SUPERFAMILY SSF52374 1 278 2.82E-108 T 12-10-2018 CLSA_c22710 7f1c2af13124c3783eb5a73a4b63a7ac 281 Gene3D G3DSA:3.30.1300.10 178 277 4.1E-33 T 12-10-2018 CLSA_c24530 0b304e0ca61cbf6d34269f38b684fc9e 334 Gene3D G3DSA:3.40.190.10 120 222 1.0E-106 T 12-10-2018 CLSA_c24530 0b304e0ca61cbf6d34269f38b684fc9e 334 SUPERFAMILY SSF53850 40 322 3.93E-42 T 12-10-2018 CLSA_c24530 0b304e0ca61cbf6d34269f38b684fc9e 334 Gene3D G3DSA:3.40.190.10 42 331 1.0E-106 T 12-10-2018 CLSA_c24530 0b304e0ca61cbf6d34269f38b684fc9e 334 Pfam PF09084 NMT1/THI5 like 47 261 9.0E-72 T 12-10-2018 IPR015168 SsuA/THI5-like CLSA_c40380 a9e685746ab821fa67d75a42c0514eb7 167 SUPERFAMILY SSF69360 39 166 1.15E-30 T 12-10-2018 CLSA_c40380 a9e685746ab821fa67d75a42c0514eb7 167 Pfam PF01473 Putative cell wall binding repeat 130 144 5.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c40380 a9e685746ab821fa67d75a42c0514eb7 167 Pfam PF01473 Putative cell wall binding repeat 111 128 0.0012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c40380 a9e685746ab821fa67d75a42c0514eb7 167 Pfam PF01473 Putative cell wall binding repeat 95 108 0.014 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c40380 a9e685746ab821fa67d75a42c0514eb7 167 Gene3D G3DSA:2.10.270.10 22 90 2.2E-5 T 12-10-2018 CLSA_c40380 a9e685746ab821fa67d75a42c0514eb7 167 Gene3D G3DSA:2.10.270.10 91 167 7.8E-24 T 12-10-2018 CLSA_c35870 8e73c81f0977f9b28fcf57b4de096de3 306 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 87 295 1.3E-61 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 CLSA_c33130 f2f8584dc676e1841f264cf54d91fd4f 348 Pfam PF13407 Periplasmic binding protein domain 42 321 1.3E-49 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c33130 f2f8584dc676e1841f264cf54d91fd4f 348 Gene3D G3DSA:3.40.50.2300 151 302 7.0E-99 T 12-10-2018 CLSA_c33130 f2f8584dc676e1841f264cf54d91fd4f 348 Gene3D G3DSA:3.40.50.2300 43 328 7.0E-99 T 12-10-2018 CLSA_c33130 f2f8584dc676e1841f264cf54d91fd4f 348 SUPERFAMILY SSF53822 38 343 3.44E-65 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 3.5E-32 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 Gene3D G3DSA:1.10.8.50 1 72 5.3E-31 T 12-10-2018 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 PIRSF PIRSF002134 1 122 5.4E-45 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 SUPERFAMILY SSF46946 2 121 1.96E-46 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.2E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 Gene3D G3DSA:4.10.910.10 73 122 5.3E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02280 8ec34da082b483dd92d0947656c9c51f 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.588 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c32340 306a03c51276dd191f656c98b5750d5b 348 TIGRFAM TIGR00378 cax: calcium/proton exchanger 7 346 7.6E-119 T 12-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 CLSA_c32340 306a03c51276dd191f656c98b5750d5b 348 Gene3D G3DSA:1.20.58.1130 191 236 9.6E-24 T 12-10-2018 CLSA_c32340 306a03c51276dd191f656c98b5750d5b 348 Pfam PF01699 Sodium/calcium exchanger protein 25 179 5.2E-15 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLSA_c32340 306a03c51276dd191f656c98b5750d5b 348 Pfam PF01699 Sodium/calcium exchanger protein 205 343 4.2E-17 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLSA_c32340 306a03c51276dd191f656c98b5750d5b 348 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 4 346 6.0E-97 T 12-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c32340 306a03c51276dd191f656c98b5750d5b 348 Gene3D G3DSA:1.20.1420.30 57 339 9.6E-24 T 12-10-2018 CLSA_c21580 c24adb6f2aef0edaaa7fa49b2c813515 247 Gene3D G3DSA:3.40.50.1580 2 246 5.3E-73 T 12-10-2018 CLSA_c21580 c24adb6f2aef0edaaa7fa49b2c813515 247 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c21580 c24adb6f2aef0edaaa7fa49b2c813515 247 SUPERFAMILY SSF53167 6 227 3.93E-63 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CLSA_c21580 c24adb6f2aef0edaaa7fa49b2c813515 247 Pfam PF01048 Phosphorylase superfamily 18 202 3.3E-32 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 Gene3D G3DSA:3.40.50.80 107 211 1.1E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 PIRSF PIRSF006816 1 263 1.3E-64 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 SUPERFAMILY SSF52343 104 256 6.94E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 221 256 4.1E-12 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 Gene3D G3DSA:2.40.30.10 1 91 7.7E-25 T 12-10-2018 CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 Pfam PF00175 Oxidoreductase NAD-binding domain 110 205 3.7E-6 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c40750 192f1de9923f575847541ce6a5d92ccf 296 SUPERFAMILY SSF63380 1 91 1.17E-20 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c40080 bf158dccd336271bdfe4d81f3d55e119 434 Gene3D G3DSA:3.40.640.10 49 307 3.9E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c40080 bf158dccd336271bdfe4d81f3d55e119 434 Pfam PF00266 Aminotransferase class-V 31 421 9.7E-86 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c40080 bf158dccd336271bdfe4d81f3d55e119 434 Gene3D G3DSA:3.90.1150.10 31 422 3.9E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c40080 bf158dccd336271bdfe4d81f3d55e119 434 SUPERFAMILY SSF53383 29 428 3.3E-83 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c40080 bf158dccd336271bdfe4d81f3d55e119 434 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 223 242 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLSA_c38030 431a8c96ca2450ee47860d0d9d594779 376 Gene3D G3DSA:2.10.270.10 225 375 4.3E-27 T 12-10-2018 CLSA_c38030 431a8c96ca2450ee47860d0d9d594779 376 Pfam PF01473 Putative cell wall binding repeat 338 357 1.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c38030 431a8c96ca2450ee47860d0d9d594779 376 Pfam PF01473 Putative cell wall binding repeat 299 315 0.0023 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c38030 431a8c96ca2450ee47860d0d9d594779 376 Pfam PF01473 Putative cell wall binding repeat 318 336 3.5E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c38030 431a8c96ca2450ee47860d0d9d594779 376 SUPERFAMILY SSF69360 273 375 6.15E-25 T 12-10-2018 CLSA_c38030 431a8c96ca2450ee47860d0d9d594779 376 Pfam PF12733 Cadherin-like beta sandwich domain 166 255 1.5E-21 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 2.9E-150 T 12-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 PIRSF PIRSF000770 11 257 1.3E-35 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 PRINTS PR00046 Major sigma-70 factor signature 210 222 6.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 PRINTS PR00046 Major sigma-70 factor signature 242 253 6.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 PRINTS PR00046 Major sigma-70 factor signature 227 242 6.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 PRINTS PR00046 Major sigma-70 factor signature 66 79 6.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 PRINTS PR00046 Major sigma-70 factor signature 90 98 6.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 SUPERFAMILY SSF88659 114 189 3.31E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 SUPERFAMILY SSF88659 175 256 2.8E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 256 2.1E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 Pfam PF04545 Sigma-70, region 4 206 255 8.9E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 Gene3D G3DSA:1.20.120.1810 4 110 1.6E-27 T 12-10-2018 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 Pfam PF04542 Sigma-70 region 2 43 111 5.8E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 36 256 1.0E-81 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 SUPERFAMILY SSF88946 5 110 9.42E-34 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c13430 77437063f1db122af78653ba9bbffe3b 257 Gene3D G3DSA:1.20.140.160 113 257 2.9E-25 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:1.20.1640.10 500 998 2.0E-259 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 SUPERFAMILY SSF82693 137 318 2.44E-16 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:1.20.1640.10 10 499 2.0E-259 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Pfam PF00873 AcrB/AcrD/AcrF family 4 1001 5.5E-186 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:3.30.70.1320 133 326 2.0E-259 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 SUPERFAMILY SSF82693 41 129 1.05E-19 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:3.30.2090.10 176 268 2.0E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 SUPERFAMILY SSF82714 702 785 2.88E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 SUPERFAMILY SSF82866 296 488 6.02E-34 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:3.30.70.1430 40 795 2.0E-259 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:3.30.70.1440 650 844 2.0E-259 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 PRINTS PR00702 Acriflavin resistance protein family signature 531 548 1.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:3.30.2090.10 701 787 2.0E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 SUPERFAMILY SSF82866 783 1005 7.85E-47 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 Gene3D G3DSA:3.30.70.1430 546 649 2.0E-259 T 12-10-2018 CLSA_c16390 05258953f5d5c09459ed65a838215c76 1034 SUPERFAMILY SSF82714 180 265 4.84E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c40030 abd9b0d11b5a5311f2a5bd9d3c0188c7 223 SMART SM00382 27 197 3.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40030 abd9b0d11b5a5311f2a5bd9d3c0188c7 223 Pfam PF00005 ABC transporter 18 150 1.3E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c40030 abd9b0d11b5a5311f2a5bd9d3c0188c7 223 Gene3D G3DSA:3.40.50.300 1 220 2.9E-51 T 12-10-2018 CLSA_c40030 abd9b0d11b5a5311f2a5bd9d3c0188c7 223 SUPERFAMILY SSF52540 1 210 7.94E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40030 abd9b0d11b5a5311f2a5bd9d3c0188c7 223 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c40660 efb21f78ef560d81ed7718fec8fe9513 390 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 2 388 34.18 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 CLSA_c40660 efb21f78ef560d81ed7718fec8fe9513 390 SUPERFAMILY SSF53300 217 331 1.69E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c40660 efb21f78ef560d81ed7718fec8fe9513 390 Pfam PF04285 Protein of unknown function (DUF444) 185 386 2.4E-78 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 CLSA_c40660 efb21f78ef560d81ed7718fec8fe9513 390 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 4 383 2.0E-141 T 12-10-2018 IPR014230 Sporulation protein YhbH CLSA_c20490 d49ee159ce934efb8bccab533bdaeecc 138 Gene3D G3DSA:3.30.750.24 2 121 8.9E-29 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c20490 d49ee159ce934efb8bccab533bdaeecc 138 Pfam PF01740 STAS domain 6 96 1.8E-8 T 12-10-2018 IPR002645 STAS domain CLSA_c20490 d49ee159ce934efb8bccab533bdaeecc 138 SUPERFAMILY SSF52091 2 114 1.96E-14 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c01620 36d420367c77fcc9c900b78fab6d7ac8 110 SUPERFAMILY SSF54913 1 110 3.71E-14 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLSA_c01620 36d420367c77fcc9c900b78fab6d7ac8 110 Gene3D G3DSA:3.30.70.120 1 104 3.1E-40 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c01620 36d420367c77fcc9c900b78fab6d7ac8 110 Pfam PF06153 Cyclic-di-AMP receptor 1 110 1.8E-44 T 12-10-2018 IPR010375 Cyclic-di-AMP receptor CLSA_c06440 388fae86547b519df7e6ed39f6480f81 100 SUPERFAMILY SSF75471 1 95 2.49E-26 T 12-10-2018 IPR035920 YhbY-like superfamily CLSA_c06440 388fae86547b519df7e6ed39f6480f81 100 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 1.8E-24 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CLSA_c06440 388fae86547b519df7e6ed39f6480f81 100 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 2.0E-31 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CLSA_c06440 388fae86547b519df7e6ed39f6480f81 100 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 85 7.9E-18 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CLSA_c06440 388fae86547b519df7e6ed39f6480f81 100 Gene3D G3DSA:3.30.110.60 1 100 6.8E-31 T 12-10-2018 IPR035920 YhbY-like superfamily CLSA_c06440 388fae86547b519df7e6ed39f6480f81 100 SMART SM01103 2 85 9.1E-33 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 PIRSF PIRSF000524 1 373 1.7E-59 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 Gene3D G3DSA:3.90.1150.10 8 366 9.9E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 Gene3D G3DSA:3.40.640.10 17 268 9.9E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 373 127.354 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 Pfam PF00266 Aminotransferase class-V 45 344 1.7E-25 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 SUPERFAMILY SSF53383 5 368 5.01E-74 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c08750 6ba94f523951778d8b3c1a20f0f01a7b 373 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 7 366 2.8E-119 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 SMART SM00862 146 220 1.2E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 9.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 Gene3D G3DSA:3.40.50.2300 1 129 3.8E-35 T 12-10-2018 CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 Pfam PF00072 Response regulator receiver domain 4 113 5.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 SUPERFAMILY SSF52172 1 179 1.29E-39 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 Gene3D G3DSA:1.10.10.10 130 225 3.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37560 222eaec80fab382a4f19bd9bef0c0498 225 SMART SM00448 2 113 1.2E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 Pfam PF00881 Nitroreductase family 85 250 1.7E-26 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 Gene3D G3DSA:3.40.109.10 64 268 5.4E-35 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 SUPERFAMILY SSF55469 85 268 7.72E-34 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 Pfam PF12838 4Fe-4S dicluster domain 10 56 1.5E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 Gene3D G3DSA:3.30.70.20 4 59 1.5E-12 T 12-10-2018 CLSA_c36970 0f662f30120b0a67b6ebe7fb8300bcb4 270 SUPERFAMILY SSF54862 6 65 5.87E-18 T 12-10-2018 CLSA_c38940 05dbed8d14660b3da49753e54342206d 104 Gene3D G3DSA:3.30.70.20 3 59 2.9E-16 T 12-10-2018 CLSA_c38940 05dbed8d14660b3da49753e54342206d 104 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c38940 05dbed8d14660b3da49753e54342206d 104 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 41 52 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c38940 05dbed8d14660b3da49753e54342206d 104 Pfam PF13187 4Fe-4S dicluster domain 9 56 2.0E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c38940 05dbed8d14660b3da49753e54342206d 104 SUPERFAMILY SSF54862 4 60 2.17E-17 T 12-10-2018 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 SUPERFAMILY SSF54862 3 56 2.87E-6 T 12-10-2018 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 Pfam PF01012 Electron transfer flavoprotein domain 73 246 2.0E-42 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 Gene3D G3DSA:3.40.50.620 69 266 3.9E-69 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 Gene3D G3DSA:3.40.50.1220 267 396 5.5E-52 T 12-10-2018 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 PIRSF PIRSF000089 69 395 9.8E-102 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 Gene3D G3DSA:3.30.70.20 8 58 3.0E-5 T 12-10-2018 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 SUPERFAMILY SSF52402 71 253 2.02E-54 T 12-10-2018 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 SUPERFAMILY SSF52467 270 390 4.91E-45 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 SMART SM00893 72 260 1.0E-48 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03490 5605a47b0c351b72cd1e7daa728ada41 396 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 272 353 3.3E-33 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Gene3D G3DSA:3.30.200.20 325 419 1.7E-26 T 12-10-2018 CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Gene3D G3DSA:1.10.10.10 1 76 3.0E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Pfam PF01633 Choline/ethanolamine kinase 368 554 2.9E-30 T 12-10-2018 CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Pfam PF12804 MobA-like NTP transferase domain 93 212 3.1E-9 T 12-10-2018 IPR025877 MobA-like NTP transferase CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 SUPERFAMILY SSF46785 6 74 1.75E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 47 1.2E-7 T 12-10-2018 CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 SUPERFAMILY SSF53448 90 313 1.4E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Gene3D G3DSA:3.90.550.10 77 312 9.0E-38 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 Gene3D G3DSA:3.90.1200.10 420 616 9.1E-60 T 12-10-2018 CLSA_c41490 cc82eae9b5f0eb9ad018dfb60a947485 616 SUPERFAMILY SSF56112 323 615 2.48E-42 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 Gene3D G3DSA:2.20.150.10 20 116 1.7E-95 T 12-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 SUPERFAMILY SSF53613 11 325 2.81E-72 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 Pfam PF00294 pfkB family carbohydrate kinase 13 317 1.4E-56 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 Gene3D G3DSA:3.40.1190.20 17 304 1.7E-95 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 11 325 1.4E-124 T 12-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 CLSA_c12120 8239915b893ebacaa4952e9e7326e409 339 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 8 329 55.293 T 12-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 ProSitePatterns PS00674 AAA-protein family signature. 311 329 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 121 608 1.1E-206 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 SUPERFAMILY SSF140990 422 614 9.42E-69 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Gene3D G3DSA:3.40.50.300 157 342 4.7E-69 T 12-10-2018 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Pfam PF06480 FtsH Extracellular 24 112 6.9E-10 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 18 624 35.009 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 SMART SM00382 205 343 1.9E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 340 2.8E-45 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Gene3D G3DSA:1.20.58.760 422 629 6.4E-70 T 12-10-2018 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Pfam PF01434 Peptidase family M41 402 605 9.9E-70 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CLSA_c42680 39f2c101579f69df8decb218841fd312 700 SUPERFAMILY SSF52540 170 435 3.33E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42680 39f2c101579f69df8decb218841fd312 700 Gene3D G3DSA:1.10.8.60 343 419 5.8E-24 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 367 1.1E-32 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 96 115 1.1E-32 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 470 489 1.1E-32 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 493 511 1.1E-32 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 440 459 1.1E-32 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 Gene3D G3DSA:3.40.50.300 50 262 4.1E-34 T 12-10-2018 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 SMART SM00382 88 266 1.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 92 263 6.9E-18 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 SUPERFAMILY SSF54211 349 534 1.29E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 3 533 5.2E-258 T 12-10-2018 IPR014251 Sporulation protease LonB CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 342 535 3.4E-33 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 Gene3D G3DSA:3.30.230.10 343 551 8.3E-49 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c31210 a092bbae538eeb67acc7a689590ffced 556 SUPERFAMILY SSF52540 55 327 2.44E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Gene3D G3DSA:3.40.50.200 124 558 2.6E-149 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Gene3D G3DSA:1.10.101.10 946 1024 1.0E-15 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Pfam PF00082 Subtilase family 126 310 2.0E-16 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Pfam PF01471 Putative peptidoglycan binding domain 957 1017 3.9E-13 T 12-10-2018 IPR002477 Peptidoglycan binding-like CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 PRINTS PR00723 Subtilisin serine protease family (S8) signature 498 514 7.8E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 PRINTS PR00723 Subtilisin serine protease family (S8) signature 126 145 7.8E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 202 7.8E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 SUPERFAMILY SSF52743 68 630 8.16E-59 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Gene3D G3DSA:3.30.70.2980 8 105 7.8E-34 T 12-10-2018 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Pfam PF00082 Subtilase family 435 556 2.9E-18 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 131 142 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 499 509 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 Gene3D G3DSA:2.60.120.1290 295 436 2.6E-149 T 12-10-2018 CLSA_c00520 66a645b3aa71acc0e0351d6f338f5260 1065 SUPERFAMILY SSF47090 947 1018 2.83E-13 T 12-10-2018 IPR036365 PGBD-like superfamily CLSA_c02570 5b39423d715b11448c130885713050f0 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 77 295 5.2E-67 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLSA_c02570 5b39423d715b11448c130885713050f0 302 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 5 298 5.3E-155 T 12-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 CLSA_c02570 5b39423d715b11448c130885713050f0 302 SUPERFAMILY SSF53659 6 299 6.99E-65 T 12-10-2018 CLSA_c02570 5b39423d715b11448c130885713050f0 302 Gene3D G3DSA:3.40.718.10 2 300 1.2E-104 T 12-10-2018 CLSA_c02570 5b39423d715b11448c130885713050f0 302 PIRSF PIRSF000428 1 302 1.2E-93 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 SMART SM00304 206 258 1.8E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 Gene3D G3DSA:1.10.287.950 260 562 6.2E-57 T 12-10-2018 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 SMART SM00283 287 562 1.0E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 412 6.0E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 6.0E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 22 47 6.0E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 SUPERFAMILY SSF58104 226 562 2.62E-57 T 12-10-2018 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 Gene3D G3DSA:1.20.1480.50 168 259 9.5E-11 T 12-10-2018 CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 SUPERFAMILY SSF103190 71 171 8.63E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c24010 9c332e1b2c6c9dbdcb4a7797d0250c8f 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 512 2.9E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 Pfam PF01791 DeoC/LacD family aldolase 15 202 8.4E-19 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 PIRSF PIRSF001357 1 221 4.9E-76 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 SUPERFAMILY SSF51569 3 216 2.62E-76 T 12-10-2018 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 Gene3D G3DSA:3.20.20.70 1 219 4.0E-85 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 6 214 3.0E-70 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 4 217 32.363 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CLSA_c10410 b2327d936c6d389aec7b51325cdef991 221 SMART SM01133 5 215 8.1E-78 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CLSA_c05830 a4200c2d646b36d688b14b0b86b3ff36 322 Gene3D G3DSA:1.10.10.1880 180 243 6.3E-12 T 12-10-2018 CLSA_c05830 a4200c2d646b36d688b14b0b86b3ff36 322 Gene3D G3DSA:3.40.50.1010 1 142 1.2E-17 T 12-10-2018 CLSA_c05830 a4200c2d646b36d688b14b0b86b3ff36 322 Pfam PF12872 OST-HTH/LOTUS domain 178 237 4.2E-10 T 12-10-2018 IPR025605 OST-HTH/LOTUS domain CLSA_c05830 a4200c2d646b36d688b14b0b86b3ff36 322 Pfam PF01936 NYN domain 6 140 2.0E-27 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 Gene3D G3DSA:2.40.500.20 94 201 4.0E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 166 173 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 PRINTS PR01703 Manganese superoxide dismutase signature 164 176 1.0E-17 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.0E-17 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 1.0E-17 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 1.0E-17 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.0E-17 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 198 1.9E-38 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 SUPERFAMILY SSF54719 96 200 1.44E-40 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 SUPERFAMILY SSF46609 3 91 4.06E-28 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 PIRSF PIRSF000349 1 201 5.4E-71 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 91 2.1E-24 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c22230 8ce45908845319ba2791edbc41aef5d1 201 Gene3D G3DSA:1.10.287.990 20 91 7.1E-26 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CLSA_c11700 24a7cc6182a79275185cb19885ce5603 329 Gene3D G3DSA:1.10.10.2840 226 329 6.4E-13 T 12-10-2018 CLSA_c11700 24a7cc6182a79275185cb19885ce5603 329 Pfam PF05651 Putative sugar diacid recognition 6 135 2.9E-44 T 12-10-2018 IPR008599 Putative sugar diacid recognition CLSA_c11700 24a7cc6182a79275185cb19885ce5603 329 Pfam PF13556 PucR C-terminal helix-turn-helix domain 287 327 1.4E-14 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 Pfam PF13604 AAA domain 197 376 2.5E-37 T 12-10-2018 CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 Pfam PF13538 UvrD-like helicase C-terminal domain 518 565 5.3E-13 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 Gene3D G3DSA:3.40.50.300 189 586 2.0E-97 T 12-10-2018 CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 Pfam PF14490 Helix-hairpin-helix containing domain 17 99 3.4E-7 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 SUPERFAMILY SSF52540 192 570 5.43E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 Gene3D G3DSA:2.30.30.940 448 518 2.0E-97 T 12-10-2018 CLSA_c29470 69faa00960f7e4dbe760b54f5a298966 595 Gene3D G3DSA:3.40.50.300 358 580 2.0E-97 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF13193 AMP-binding enzyme C-terminal domain 1146 1219 1.8E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:1.10.1200.10 1237 1314 6.4E-19 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 SUPERFAMILY SSF52777 1465 1615 3.89E-13 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.30.559.30 192 450 8.5E-126 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 SUPERFAMILY SSF53335 644 783 1.59E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF00501 AMP-binding enzyme 864 1138 2.8E-64 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF00501 AMP-binding enzyme 475 611 7.6E-28 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.30.300.30 1132 1236 1.3E-31 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 SUPERFAMILY SSF47336 1239 1310 3.93E-17 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 SUPERFAMILY SSF56801 451 1231 7.88E-128 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.30.559.10 1455 1635 1.2E-16 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF00550 Phosphopantetheine attachment site 1247 1310 7.2E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 PRINTS PR00154 AMP-binding signature 889 900 6.3E-5 T 12-10-2018 IPR020459 AMP-binding CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 PRINTS PR00154 AMP-binding signature 901 909 6.3E-5 T 12-10-2018 IPR020459 AMP-binding CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.30.559.10 13 385 8.5E-126 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF13847 Methyltransferase domain 664 783 1.0E-11 T 12-10-2018 IPR025714 Methyltransferase domain CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 SUPERFAMILY SSF52777 13 190 5.26E-41 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.40.50.12780 819 1131 1.6E-82 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 ProSitePatterns PS00455 Putative AMP-binding domain signature. 894 905 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.40.50.980 465 625 1.9E-38 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF00668 Condensation domain 8 453 1.2E-120 T 12-10-2018 IPR001242 Condensation domain CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Pfam PF00668 Condensation domain 1465 1621 6.4E-18 T 12-10-2018 IPR001242 Condensation domain CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 SUPERFAMILY SSF52777 192 457 2.89E-44 T 12-10-2018 CLSA_c37640 3746ac404b6d3c5f7b7ec0361ffdc7ba 1863 Gene3D G3DSA:3.40.50.150 632 818 4.8E-20 T 12-10-2018 CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 Gene3D G3DSA:3.90.1570.30 173 322 5.2E-32 T 12-10-2018 CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 Gene3D G3DSA:3.40.50.300 523 737 1.5E-50 T 12-10-2018 CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 Pfam PF00271 Helicase conserved C-terminal domain 599 698 2.2E-7 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 Pfam PF04851 Type III restriction enzyme, res subunit 340 491 6.5E-33 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 SUPERFAMILY SSF52540 456 699 5.32E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 SUPERFAMILY SSF52540 302 504 4.05E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 SMART SM00487 336 522 2.1E-21 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 Gene3D G3DSA:3.40.50.300 323 505 2.8E-50 T 12-10-2018 CLSA_c04420 e9ee6f8a81bb49304c6cd7d7085f12da 1102 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 195 303 1.0E-9 T 12-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain CLSA_c20500 f05617cf1d5d64e74b2308d3e35d943b 131 SUPERFAMILY SSF55874 30 127 1.57E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20500 f05617cf1d5d64e74b2308d3e35d943b 131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 128 2.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20500 f05617cf1d5d64e74b2308d3e35d943b 131 SMART SM00387 33 131 0.0073 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20500 f05617cf1d5d64e74b2308d3e35d943b 131 Gene3D G3DSA:3.30.565.10 4 130 4.8E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c18150 3e088f1284c6f2dc14b0e5680c27ffc4 498 PIRSF PIRSF006060 1 498 1.6E-50 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c18150 3e088f1284c6f2dc14b0e5680c27ffc4 498 Pfam PF13520 Amino acid permease 13 481 1.8E-31 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c18150 3e088f1284c6f2dc14b0e5680c27ffc4 498 Gene3D G3DSA:1.20.1740.10 5 498 4.4E-22 T 12-10-2018 CLSA_c36410 ac16d970bcbc67b2dd8248ea8802177d 413 Pfam PF01547 Bacterial extracellular solute-binding protein 42 329 2.2E-34 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein CLSA_c36410 ac16d970bcbc67b2dd8248ea8802177d 413 SUPERFAMILY SSF53850 22 410 5.26E-71 T 12-10-2018 CLSA_c36410 ac16d970bcbc67b2dd8248ea8802177d 413 Gene3D G3DSA:3.40.190.10 46 373 1.8E-97 T 12-10-2018 CLSA_c36410 ac16d970bcbc67b2dd8248ea8802177d 413 Gene3D G3DSA:3.40.190.10 143 404 1.8E-97 T 12-10-2018 CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 SUPERFAMILY SSF51998 2 742 5.49E-273 T 12-10-2018 CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 4 742 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 Pfam PF01228 Glycine radical 618 723 1.3E-41 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 PIRSF PIRSF000379 1 743 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 ProSitePatterns PS00850 Glycine radical domain signature. 713 721 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 Gene3D G3DSA:3.20.70.20 1 743 6.6E-290 T 12-10-2018 CLSA_c12530 4628fcc2ef3f2bf2100c3db26ea03847 743 Pfam PF02901 Pyruvate formate lyase-like 19 601 6.5E-197 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 SMART SM00382 122 256 0.0071 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 SUPERFAMILY SSF52540 4 337 1.04E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 Gene3D G3DSA:3.30.450.90 1 100 1.0E-21 T 12-10-2018 CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 Pfam PF00437 Type II/IV secretion system protein 120 256 3.6E-39 T 12-10-2018 IPR001482 Type II/IV secretion system protein CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 334 4.9E-124 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CLSA_c11460 05250670ed2d0ad273a5c20e17476cfd 345 Gene3D G3DSA:3.40.50.300 102 344 1.5E-89 T 12-10-2018 CLSA_c13490 e87e2459d133edb1fb559dc78923b8af 303 Gene3D G3DSA:3.40.190.10 51 295 3.0E-78 T 12-10-2018 CLSA_c13490 e87e2459d133edb1fb559dc78923b8af 303 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 295 1.0E-76 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 CLSA_c13490 e87e2459d133edb1fb559dc78923b8af 303 SUPERFAMILY SSF53850 49 300 3.91E-66 T 12-10-2018 CLSA_c13490 e87e2459d133edb1fb559dc78923b8af 303 Pfam PF12849 PBP superfamily domain 43 283 3.8E-37 T 12-10-2018 IPR024370 PBP domain CLSA_c13490 e87e2459d133edb1fb559dc78923b8af 303 Gene3D G3DSA:3.40.190.10 124 254 3.0E-78 T 12-10-2018 CLSA_c31390 cf26c583484cc428160f46abc134d71a 382 Gene3D G3DSA:3.40.640.10 14 253 5.7E-124 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c31390 cf26c583484cc428160f46abc134d71a 382 SUPERFAMILY SSF53383 3 374 8.29E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c31390 cf26c583484cc428160f46abc134d71a 382 Pfam PF00266 Aminotransferase class-V 3 366 1.1E-79 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c31390 cf26c583484cc428160f46abc134d71a 382 PIRSF PIRSF005572 1 380 1.1E-105 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CLSA_c31390 cf26c583484cc428160f46abc134d71a 382 Gene3D G3DSA:3.90.1150.10 3 372 5.7E-124 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c31390 cf26c583484cc428160f46abc134d71a 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 Gene3D G3DSA:3.40.50.300 488 696 5.0E-27 T 12-10-2018 CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 Gene3D G3DSA:3.90.1570.50 54 244 5.5E-9 T 12-10-2018 CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 SMART SM00487 295 505 2.3E-4 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 SUPERFAMILY SSF52540 321 674 1.1E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 SUPERFAMILY SSF52540 261 515 1.49E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 185 1.7E-18 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 Gene3D G3DSA:3.40.50.300 298 487 4.6E-40 T 12-10-2018 CLSA_c09070 2beeb92477ded2f55716820a19257e43 1003 Pfam PF04851 Type III restriction enzyme, res subunit 298 468 2.3E-23 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 Pfam PF12833 Helix-turn-helix domain 321 398 8.8E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 366 381 1.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 381 397 1.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 SMART SM00342 314 397 4.4E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 Gene3D G3DSA:1.10.10.60 293 347 1.0E-15 T 12-10-2018 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 SMART SM00448 2 116 2.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 Gene3D G3DSA:3.40.50.12740 3 168 4.9E-31 T 12-10-2018 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 Pfam PF00072 Response regulator receiver domain 5 116 6.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 Gene3D G3DSA:1.10.10.60 348 399 2.1E-16 T 12-10-2018 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 SUPERFAMILY SSF46689 350 399 1.39E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 351 393 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c07470 c70f8748d48b2751dfc2fdf8cc07e84c 400 SUPERFAMILY SSF52172 1 137 1.57E-30 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c23630 06265399d0701b3d2f76b8bc431ccc97 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 13 140 2.0E-33 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c23630 06265399d0701b3d2f76b8bc431ccc97 154 SUPERFAMILY SSF46785 14 144 3.5E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c23630 06265399d0701b3d2f76b8bc431ccc97 154 Pfam PF02082 Transcriptional regulator 13 94 1.5E-23 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c23630 06265399d0701b3d2f76b8bc431ccc97 154 Gene3D G3DSA:1.10.10.10 11 154 4.1E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c23630 06265399d0701b3d2f76b8bc431ccc97 154 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 61 79 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Pfam PF01645 Conserved region in glutamate synthase 816 1184 1.2E-156 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.4E-187 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Gene3D G3DSA:2.160.20.60 1238 1510 2.9E-108 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 SUPERFAMILY SSF56235 21 447 4.1E-149 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 SUPERFAMILY SSF51395 458 1220 1.1E-256 T 12-10-2018 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Gene3D G3DSA:3.20.20.70 799 1235 1.7E-192 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Pfam PF01493 GXGXG motif 1267 1454 1.8E-82 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Gene3D G3DSA:3.20.20.70 451 798 3.4E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Pfam PF04898 Glutamate synthase central domain 473 750 6.2E-115 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 Gene3D G3DSA:3.60.20.10 21 450 2.3E-182 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c11630 d8771748ba3ac57d91f3844857dc47ff 1525 SUPERFAMILY SSF69336 1237 1500 5.62E-92 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:1.10.150.390 1107 1168 1.9E-29 T 12-10-2018 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Pfam PF05000 RNA polymerase Rpb1, domain 4 669 735 7.4E-15 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:1.10.132.30 637 771 6.4E-60 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1168 18.617 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 376 2.3E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 475 2.8E-28 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Pfam PF04998 RNA polymerase Rpb1, domain 5 747 1105 7.2E-67 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:1.10.274.100 547 636 5.0E-21 T 12-10-2018 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 332 3.4E-92 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 640 8.4E-28 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 SMART SM00663 225 504 2.0E-181 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1158 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 SUPERFAMILY SSF64484 5 1159 0.0 T 12-10-2018 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:1.10.274.100 480 546 7.2E-27 T 12-10-2018 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:1.10.1790.20 928 1105 4.0E-68 T 12-10-2018 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:1.10.40.90 364 406 1.0E-23 T 12-10-2018 CLSA_c01950 e482679481af97239931f216278a5ad6 1174 Gene3D G3DSA:2.40.50.100 944 1006 4.0E-68 T 12-10-2018 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 5.6E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 5.6E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 5.6E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 69 5.6E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 SUPERFAMILY SSF46785 21 112 1.36E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 SMART SM00418 37 115 2.0E-31 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 Gene3D G3DSA:1.10.10.10 4 121 2.3E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 Pfam PF01022 Bacterial regulatory protein, arsR family 44 90 1.2E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c17750 f0ab76b9eff5594b0b4ea9f949f3308e 121 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 60 78 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLSA_c27490 c27aad3d1ddb662409b6099e50ed2eba 91 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 21 67 1.5E-10 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c27490 c27aad3d1ddb662409b6099e50ed2eba 91 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 31 40 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c27490 c27aad3d1ddb662409b6099e50ed2eba 91 Gene3D G3DSA:1.10.8.910 18 73 1.6E-9 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Gene3D G3DSA:1.20.1110.10 42 842 5.2E-295 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Gene3D G3DSA:3.40.50.1000 300 635 5.2E-295 T 12-10-2018 IPR023214 HAD superfamily CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 SUPERFAMILY SSF81660 310 491 4.14E-49 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 SMART SM00831 3 64 1.9E-17 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 450 468 5.5E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 606 5.5E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 562 578 5.5E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 622 647 5.5E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 560 677 4.6E-35 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 390 535 5.3E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 70 326 1.4E-50 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 SUPERFAMILY SSF81665 8 847 1.31E-131 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Gene3D G3DSA:3.40.1110.10 313 495 5.2E-295 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 6 839 9.1E-154 T 12-10-2018 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Pfam PF00689 Cation transporting ATPase, C-terminus 674 843 1.6E-52 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 149 163 8.8E-39 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 609 8.8E-39 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 488 499 8.8E-39 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 8.8E-39 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 520 8.8E-39 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 626 8.8E-39 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Gene3D G3DSA:2.70.150.10 6 206 5.2E-295 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 59 8.8E-16 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 604 2.9E-21 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 Pfam PF00122 E1-E2 ATPase 99 283 1.3E-52 T 12-10-2018 CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 SUPERFAMILY SSF56784 301 695 1.84E-58 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c39110 5b936f1fd3258e7dc1a5c0c842338d94 850 SUPERFAMILY SSF81653 102 203 2.48E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Gene3D G3DSA:3.40.50.10490 246 607 7.0E-146 T 12-10-2018 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Pfam PF01380 SIS domain 462 587 1.9E-19 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Pfam PF01380 SIS domain 289 415 2.2E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 40.572 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 SUPERFAMILY SSF53697 244 608 2.88E-109 T 12-10-2018 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Gene3D G3DSA:3.40.50.10490 446 593 7.0E-146 T 12-10-2018 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.2E-249 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Gene3D G3DSA:3.60.20.10 2 239 1.6E-76 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 SUPERFAMILY SSF56235 2 235 1.03E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c02870 fe5d55e5f21355df0a4ec8456c598985 608 Pfam PF13522 Glutamine amidotransferase domain 63 190 1.1E-18 T 12-10-2018 CLSA_c03670 4579d73a404030623eb3125059b40c17 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 3.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c03670 4579d73a404030623eb3125059b40c17 137 SUPERFAMILY SSF54523 19 98 1.1E-14 T 12-10-2018 CLSA_c03670 4579d73a404030623eb3125059b40c17 137 Gene3D G3DSA:3.30.700.10 19 136 1.2E-15 T 12-10-2018 CLSA_c03670 4579d73a404030623eb3125059b40c17 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 39 5.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c03670 4579d73a404030623eb3125059b40c17 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c22420 590cf60d5846f918c7c6df2e19607da7 159 PIRSF PIRSF006181 2 159 1.5E-57 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLSA_c22420 590cf60d5846f918c7c6df2e19607da7 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 7 157 6.2E-54 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLSA_c22420 590cf60d5846f918c7c6df2e19607da7 159 Pfam PF04073 Aminoacyl-tRNA editing domain 36 148 2.0E-20 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c22420 590cf60d5846f918c7c6df2e19607da7 159 SUPERFAMILY SSF55826 7 158 1.02E-36 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c22420 590cf60d5846f918c7c6df2e19607da7 159 Gene3D G3DSA:3.90.960.10 1 159 1.4E-48 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c06030 5ae169038ef984afd7b05323340cdb8d 217 SUPERFAMILY SSF57997 15 153 5.56E-6 T 12-10-2018 CLSA_c06030 5ae169038ef984afd7b05323340cdb8d 217 Pfam PF04012 PspA/IM30 family 2 201 7.6E-40 T 12-10-2018 IPR007157 PspA/IM30 CLSA_c19540 27ba0a7890b8d90279d62b32cdf96a40 495 Pfam PF08666 SAF domain 11 82 4.0E-15 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CLSA_c19540 27ba0a7890b8d90279d62b32cdf96a40 495 SMART SM00858 11 82 1.1E-13 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CLSA_c19540 27ba0a7890b8d90279d62b32cdf96a40 495 Gene3D G3DSA:3.90.1210.30 3 85 2.2E-28 T 12-10-2018 CLSA_c19540 27ba0a7890b8d90279d62b32cdf96a40 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 4.5E-159 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CLSA_c14990 45b1f8ff07e318baab1925232ad15c56 429 SUPERFAMILY SSF49899 29 265 2.38E-81 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c14990 45b1f8ff07e318baab1925232ad15c56 429 Pfam PF00722 Glycosyl hydrolases family 16 70 261 3.6E-35 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 CLSA_c14990 45b1f8ff07e318baab1925232ad15c56 429 Gene3D G3DSA:2.60.120.200 26 273 2.1E-88 T 12-10-2018 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 SMART SM00363 12 80 3.1E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 Gene3D G3DSA:3.10.290.10 1 67 4.8E-14 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 Pfam PF00849 RNA pseudouridylate synthase 91 250 3.5E-22 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 SUPERFAMILY SSF55174 11 62 4.41E-6 T 12-10-2018 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 Gene3D G3DSA:3.30.2350.10 82 318 8.9E-45 T 12-10-2018 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 SUPERFAMILY SSF55120 79 301 1.46E-41 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c31040 474d012427e4c0b9a24cfdf6102787fb 324 Pfam PF01479 S4 domain 12 58 3.5E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c36160 80e61c64e82936a9b31c02f8211f44ea 190 SMART SM00903 12 154 0.0027 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c36160 80e61c64e82936a9b31c02f8211f44ea 190 Pfam PF01613 Flavin reductase like domain 14 147 2.1E-15 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c36160 80e61c64e82936a9b31c02f8211f44ea 190 Gene3D G3DSA:2.30.110.10 8 190 2.0E-45 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c36160 80e61c64e82936a9b31c02f8211f44ea 190 SUPERFAMILY SSF50475 14 175 9.67E-32 T 12-10-2018 CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 SUPERFAMILY SSF55326 2 165 1.94E-51 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 SUPERFAMILY SSF56042 166 330 2.99E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 Gene3D G3DSA:3.30.1330.10 2 165 4.3E-66 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 332 45.347 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 159 2.6E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 329 2.0E-33 T 12-10-2018 IPR010918 PurM-like, C-terminal domain CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 2 325 3.9E-131 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLSA_c13000 f3dc170bb64d106603cff81b5c030510 333 Gene3D G3DSA:3.90.650.10 166 331 1.5E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 377 441 3.0 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Gene3D G3DSA:3.30.413.10 364 500 2.0E-19 T 12-10-2018 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 SUPERFAMILY SSF55124 249 386 4.09E-13 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 302 366 6.0E-8 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 46 104 2.0E-12 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 SUPERFAMILY SSF56014 376 486 2.36E-19 T 12-10-2018 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Gene3D G3DSA:3.30.413.10 117 287 1.8E-74 T 12-10-2018 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 SUPERFAMILY SSF55124 11 114 2.13E-26 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Gene3D G3DSA:3.90.480.10 50 360 1.8E-74 T 12-10-2018 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 SUPERFAMILY SSF56014 118 276 5.89E-41 T 12-10-2018 CLSA_c10870 3aec112c4fa162148d20bc2c2cad04fa 516 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 118 270 9.9E-34 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 Gene3D G3DSA:3.30.70.600 1 102 1.6E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 SUPERFAMILY SSF54999 5 102 1.96E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 4.7E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 5.0E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.6E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.6E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.6E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.343 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 SMART SM01403 7 101 2.3E-57 T 12-10-2018 IPR027486 Ribosomal protein S10 domain CLSA_c02000 484dd675585996822f4bf0d728c241cb 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 317 1.0E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 619 1.7E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 SUPERFAMILY SSF58104 98 361 2.49E-51 T 12-10-2018 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.1E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 519 548 1.1E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 SUPERFAMILY SSF58104 379 661 1.66E-47 T 12-10-2018 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 Gene3D G3DSA:1.10.287.950 47 364 1.7E-53 T 12-10-2018 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 Gene3D G3DSA:1.10.287.950 365 662 4.2E-45 T 12-10-2018 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 SMART SM00283 392 653 6.1E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20380 a4ab6a6b05d972a5a6926abf62b679d1 662 SMART SM00283 71 367 2.2E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 PRINTS PR00095 Anthranilate synthase component I signature 378 392 6.0E-7 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 PRINTS PR00095 Anthranilate synthase component I signature 393 407 6.0E-7 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 PRINTS PR00095 Anthranilate synthase component I signature 284 297 6.0E-7 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 PRINTS PR00095 Anthranilate synthase component I signature 298 311 6.0E-7 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 Gene3D G3DSA:3.60.120.10 4 446 1.5E-116 T 12-10-2018 IPR005801 ADC synthase GO:0009058 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 24 445 8.0E-132 T 12-10-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 Pfam PF00425 chorismate binding enzyme 182 436 8.1E-66 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CLSA_c16880 ee55b0127d7949bf6c48e3e1f7a9f022 448 SUPERFAMILY SSF56322 24 444 6.02E-81 T 12-10-2018 IPR005801 ADC synthase GO:0009058 CLSA_c27810 31c7a11052233f75a0821f36b2b44603 449 PIRSF PIRSF006603 2 449 8.3E-94 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c27810 31c7a11052233f75a0821f36b2b44603 449 Pfam PF01554 MatE 14 176 1.0E-36 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c27810 31c7a11052233f75a0821f36b2b44603 449 Pfam PF01554 MatE 244 404 1.3E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c27810 31c7a11052233f75a0821f36b2b44603 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 418 2.3E-79 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 SUPERFAMILY SSF51735 280 544 8.56E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 Pfam PF13727 CoA-binding domain 109 238 9.2E-14 T 12-10-2018 CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 Gene3D G3DSA:3.40.50.720 137 264 3.4E-37 T 12-10-2018 CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 Gene3D G3DSA:3.40.50.720 281 567 3.7E-122 T 12-10-2018 CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 Pfam PF02719 Polysaccharide biosynthesis protein 283 565 1.4E-124 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 SUPERFAMILY SSF51735 140 270 2.28E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c41290 5eaaba6be227c243a8457dff722c3fa7 621 Gene3D G3DSA:3.90.25.30 445 545 3.7E-122 T 12-10-2018 CLSA_c03770 cb28f1ef5a26d153b33b8396621f7fc3 473 ProSitePatterns PS00942 glpT family of transporters signature. 158 174 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 CLSA_c03770 cb28f1ef5a26d153b33b8396621f7fc3 473 Pfam PF07690 Major Facilitator Superfamily 37 397 5.4E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c03770 cb28f1ef5a26d153b33b8396621f7fc3 473 Gene3D G3DSA:1.20.1250.20 247 465 1.4E-38 T 12-10-2018 CLSA_c03770 cb28f1ef5a26d153b33b8396621f7fc3 473 PIRSF PIRSF002808 10 467 5.0E-128 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CLSA_c03770 cb28f1ef5a26d153b33b8396621f7fc3 473 SUPERFAMILY SSF103473 21 455 1.57E-63 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c03770 cb28f1ef5a26d153b33b8396621f7fc3 473 Gene3D G3DSA:1.20.1250.20 23 232 1.4E-40 T 12-10-2018 CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 SUPERFAMILY SSF46785 158 237 7.99E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 Gene3D G3DSA:2.60.120.10 12 156 1.8E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 Pfam PF00027 Cyclic nucleotide-binding domain 42 129 4.1E-22 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 1.8E-10 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 1.8E-10 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 SMART SM00419 180 229 3.8E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 Gene3D G3DSA:1.10.10.10 157 237 2.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 SMART SM00100 23 141 1.7E-25 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 SUPERFAMILY SSF51206 19 156 2.49E-36 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 ProSitePatterns PS00042 Crp-type HTH domain signature. 188 211 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CLSA_c37860 3ccd64f52fdf5da21211c49f5d98137a 237 Pfam PF13545 Crp-like helix-turn-helix domain 162 236 8.7E-20 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 Pfam PF02033 Ribosome-binding factor A 6 110 7.2E-33 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 2.0E-29 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 9.4E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 Gene3D G3DSA:3.30.300.20 1 116 5.8E-37 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 SUPERFAMILY SSF89919 1 113 2.75E-33 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 110 27.582 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CLSA_c14420 8ebe58026c332767d6dc8de80e9e0ec7 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 203 2.1E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 Pfam PF04542 Sigma-70 region 2 30 99 6.7E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 7 204 3.5E-108 T 12-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 PIRSF PIRSF002939 2 206 3.8E-104 T 12-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 SUPERFAMILY SSF88946 8 99 2.49E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 Pfam PF08281 Sigma-70, region 4 164 199 4.5E-7 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 SUPERFAMILY SSF46894 144 200 1.17E-7 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c01840 79469952088d450548ab6f9d2a28867e 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c38520 c851c863adf5bff2b1bffbd9f7ff0fba 289 SUPERFAMILY SSF82549 3 287 2.88E-83 T 12-10-2018 CLSA_c38520 c851c863adf5bff2b1bffbd9f7ff0fba 289 Gene3D G3DSA:3.30.1180.10 157 288 1.1E-39 T 12-10-2018 CLSA_c38520 c851c863adf5bff2b1bffbd9f7ff0fba 289 Gene3D G3DSA:3.40.50.10170 1 155 1.6E-47 T 12-10-2018 CLSA_c38520 c851c863adf5bff2b1bffbd9f7ff0fba 289 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 6 285 7.8E-87 T 12-10-2018 IPR003797 DegV CLSA_c38520 c851c863adf5bff2b1bffbd9f7ff0fba 289 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 286 4.6E-82 T 12-10-2018 IPR003797 DegV CLSA_c02330 23501378ea4ac845aa21232114f1f2a7 283 SMART SM00382 38 224 7.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c02330 23501378ea4ac845aa21232114f1f2a7 283 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c02330 23501378ea4ac845aa21232114f1f2a7 283 Pfam PF00005 ABC transporter 29 176 1.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c02330 23501378ea4ac845aa21232114f1f2a7 283 SUPERFAMILY SSF52540 5 237 1.18E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c02330 23501378ea4ac845aa21232114f1f2a7 283 Gene3D G3DSA:3.40.50.300 2 282 5.9E-76 T 12-10-2018 CLSA_c02330 23501378ea4ac845aa21232114f1f2a7 283 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 280 1.5E-123 T 12-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CLSA_c05690 61491b47abd59aa77d188ee79539df28 129 Gene3D G3DSA:1.20.120.50 2 129 1.7E-32 T 12-10-2018 IPR035938 Hemerythrin-like superfamily CLSA_c05690 61491b47abd59aa77d188ee79539df28 129 Pfam PF01814 Hemerythrin HHE cation binding domain 12 121 2.8E-9 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CLSA_c05690 61491b47abd59aa77d188ee79539df28 129 SUPERFAMILY SSF47188 2 127 4.58E-28 T 12-10-2018 IPR035938 Hemerythrin-like superfamily CLSA_c05690 61491b47abd59aa77d188ee79539df28 129 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 127 1.2E-27 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 SUPERFAMILY SSF46785 4 71 8.72E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 5.9E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 SUPERFAMILY SSF100950 76 232 6.05E-17 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 SMART SM01134 73 231 2.5E-42 T 12-10-2018 CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 SMART SM00420 6 58 9.6E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 Gene3D G3DSA:1.10.10.10 1 58 1.4E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 Pfam PF00455 DeoR C terminal sensor domain 76 229 7.4E-33 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.5E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c42530 be758a4ed0f3b87df89bae31174acb3b 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.5E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c16000 0d53dd113da223d370c1b3e55e1e6188 255 Gene3D G3DSA:1.10.10.60 144 251 1.2E-13 T 12-10-2018 CLSA_c16000 0d53dd113da223d370c1b3e55e1e6188 255 SMART SM00342 168 247 6.1E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c16000 0d53dd113da223d370c1b3e55e1e6188 255 Pfam PF12833 Helix-turn-helix domain 171 246 6.2E-11 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c01020 071847833a5253df63c99de29f0143e2 359 SUPERFAMILY SSF53092 4 129 5.06E-14 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLSA_c01020 071847833a5253df63c99de29f0143e2 359 Pfam PF00557 Metallopeptidase family M24 138 342 1.5E-66 T 12-10-2018 IPR000994 Peptidase M24 CLSA_c01020 071847833a5253df63c99de29f0143e2 359 SUPERFAMILY SSF55920 133 358 4.45E-73 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like CLSA_c01020 071847833a5253df63c99de29f0143e2 359 Gene3D G3DSA:3.90.230.10 132 358 4.3E-80 T 12-10-2018 CLSA_c01020 071847833a5253df63c99de29f0143e2 359 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 131 1.5E-13 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 CLSA_c01020 071847833a5253df63c99de29f0143e2 359 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 288 300 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLSA_c01020 071847833a5253df63c99de29f0143e2 359 Gene3D G3DSA:3.40.350.10 2 131 4.1E-21 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLSA_c02700 bf39ef578b3d27d94a4ebe7b66b683d9 162 Gene3D G3DSA:3.20.19.10 1 162 4.7E-61 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CLSA_c02700 bf39ef578b3d27d94a4ebe7b66b683d9 162 Pfam PF00694 Aconitase C-terminal domain 39 104 5.1E-20 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CLSA_c02700 bf39ef578b3d27d94a4ebe7b66b683d9 162 SUPERFAMILY SSF52016 3 161 1.33E-51 T 12-10-2018 CLSA_c02700 bf39ef578b3d27d94a4ebe7b66b683d9 162 TIGRFAM TIGR02084 leud: 3-isopropylmalate dehydratase, small subunit 5 159 1.0E-83 T 12-10-2018 IPR011824 Hydrolyase LeuD/DmdB, bacterial GO:0016836 KEGG: 00290+4.2.1.33 CLSA_c02700 bf39ef578b3d27d94a4ebe7b66b683d9 162 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 160 4.9E-65 T 12-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 CLSA_c02700 bf39ef578b3d27d94a4ebe7b66b683d9 162 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 162 38.033 T 12-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 Gene3D G3DSA:3.30.420.40 1 253 5.6E-110 T 12-10-2018 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 Gene3D G3DSA:3.30.420.40 254 499 3.7E-91 T 12-10-2018 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 496 1.5E-228 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 SUPERFAMILY SSF53067 3 255 9.07E-96 T 12-10-2018 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 SUPERFAMILY SSF53067 255 497 1.3E-84 T 12-10-2018 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 252 9.2E-86 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 5.9E-61 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 PIRSF PIRSF000538 2 499 3.4E-182 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLSA_c28310 01a4352cd10dea1f6d544e6573ddc0e3 499 Hamap MF_00186 Glycerol kinase [glpK]. 2 497 59.832 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 Pfam PF03734 L,D-transpeptidase catalytic domain 351 469 1.2E-17 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 Pfam PF12229 Putative peptidoglycan binding domain 215 330 4.3E-24 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 Pfam PF12229 Putative peptidoglycan binding domain 91 202 4.1E-14 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 Gene3D G3DSA:2.40.440.10 350 471 1.5E-38 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 SUPERFAMILY SSF143985 223 344 2.48E-40 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 Gene3D G3DSA:1.10.269.20 223 346 1.2E-37 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c37170 0fbbb62c71afdfcad7291bb2dcabb7dd 473 SUPERFAMILY SSF141523 348 470 1.07E-29 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c15220 b614644b64fffa81498a8598b3dbf7f0 67 Pfam PF00403 Heavy-metal-associated domain 6 65 4.2E-8 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c15220 b614644b64fffa81498a8598b3dbf7f0 67 Gene3D G3DSA:3.30.70.100 3 66 3.4E-10 T 12-10-2018 CLSA_c15220 b614644b64fffa81498a8598b3dbf7f0 67 SUPERFAMILY SSF55008 3 66 1.57E-12 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c10340 22e98e6453002fc0f740e27cacd79e80 583 Gene3D G3DSA:3.20.20.140 70 531 4.8E-116 T 12-10-2018 CLSA_c10340 22e98e6453002fc0f740e27cacd79e80 583 SUPERFAMILY SSF51338 10 574 4.61E-21 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c10340 22e98e6453002fc0f740e27cacd79e80 583 SUPERFAMILY SSF51556 211 532 4.67E-18 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c10340 22e98e6453002fc0f740e27cacd79e80 583 Pfam PF07969 Amidohydrolase family 58 572 4.6E-64 T 12-10-2018 IPR013108 Amidohydrolase 3 CLSA_c10340 22e98e6453002fc0f740e27cacd79e80 583 Gene3D G3DSA:3.10.310.70 89 212 4.8E-116 T 12-10-2018 CLSA_c10340 22e98e6453002fc0f740e27cacd79e80 583 Gene3D G3DSA:2.30.40.10 16 548 4.8E-116 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c34390 af859fd773a7f4d6c6470c46d4078340 177 Gene3D G3DSA:3.40.630.30 2 142 1.8E-10 T 12-10-2018 CLSA_c34390 af859fd773a7f4d6c6470c46d4078340 177 SUPERFAMILY SSF55729 4 143 2.66E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c34390 af859fd773a7f4d6c6470c46d4078340 177 Pfam PF00583 Acetyltransferase (GNAT) family 47 135 9.3E-7 T 12-10-2018 IPR000182 GNAT domain CLSA_c10150 7cac9e7107ee9baa7e68abc562698b1a 217 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 89 170 1.5E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLSA_c10150 7cac9e7107ee9baa7e68abc562698b1a 217 Gene3D G3DSA:2.40.50.100 45 78 5.9E-6 T 12-10-2018 CLSA_c10150 7cac9e7107ee9baa7e68abc562698b1a 217 SUPERFAMILY SSF111369 43 166 1.57E-9 T 12-10-2018 CLSA_c10150 7cac9e7107ee9baa7e68abc562698b1a 217 Gene3D G3DSA:2.40.30.170 107 217 3.8E-31 T 12-10-2018 CLSA_c16750 92f79ad3a14dc7270cbcf65d9b58db36 350 Gene3D G3DSA:1.20.1530.20 3 343 9.8E-27 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily CLSA_c16750 92f79ad3a14dc7270cbcf65d9b58db36 350 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 8 337 2.6E-131 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLSA_c16750 92f79ad3a14dc7270cbcf65d9b58db36 350 PIRSF PIRSF005508 1 350 1.8E-134 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLSA_c16750 92f79ad3a14dc7270cbcf65d9b58db36 350 Pfam PF01758 Sodium Bile acid symporter family 53 249 6.3E-64 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 Gene3D G3DSA:1.10.10.10 1 56 2.2E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 SUPERFAMILY SSF46785 4 71 1.57E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.1E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 SMART SM01134 75 233 4.9E-62 T 12-10-2018 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 SMART SM00420 6 58 2.2E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 Pfam PF00455 DeoR C terminal sensor domain 77 229 9.9E-48 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c22140 90d9c53db45a4e04a994c7d6f86fe0f2 251 SUPERFAMILY SSF100950 76 229 2.09E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c40960 43c7fcc5a1ef60f26bd6d8a29c8f38fc 248 Gene3D G3DSA:3.40.50.150 79 176 6.9E-14 T 12-10-2018 CLSA_c40960 43c7fcc5a1ef60f26bd6d8a29c8f38fc 248 SUPERFAMILY SSF53335 6 158 2.34E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c40960 43c7fcc5a1ef60f26bd6d8a29c8f38fc 248 Pfam PF00398 Ribosomal RNA adenine dimethylase 89 147 3.6E-5 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLSA_c28870 eecaff943d24b40d97ef619c43bdde89 216 Pfam PF04055 Radical SAM superfamily 31 177 1.8E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c28870 eecaff943d24b40d97ef619c43bdde89 216 TIGRFAM TIGR04038 tatD_link_rSAM: radical SAM protein, TatD family-associated 24 215 3.1E-59 T 12-10-2018 IPR023821 Radical SAM, TatD-associated CLSA_c28870 eecaff943d24b40d97ef619c43bdde89 216 Pfam PF13394 4Fe-4S single cluster domain 30 142 1.3E-10 T 12-10-2018 CLSA_c28870 eecaff943d24b40d97ef619c43bdde89 216 Gene3D G3DSA:3.20.20.70 18 216 1.2E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c28870 eecaff943d24b40d97ef619c43bdde89 216 SUPERFAMILY SSF102114 28 189 1.12E-21 T 12-10-2018 CLSA_c28870 eecaff943d24b40d97ef619c43bdde89 216 TIGRFAM TIGR04100 rSAM_pair_X: radical SAM enzyme, TIGR04100 family 24 216 1.2E-79 T 12-10-2018 IPR023822 Radical SAM, TatD-associated, bacteria CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 2.4E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 421 450 2.4E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 419 2.4E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 522 8.9E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 2.1E-44 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 SUPERFAMILY SSF58104 233 570 1.7E-56 T 12-10-2018 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 SMART SM00283 294 570 1.0E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 Gene3D G3DSA:1.10.287.950 254 570 2.2E-55 T 12-10-2018 CLSA_c18190 3c1f41a5c4c6a9fe9abaf1730b8c2c58 571 SMART SM00304 213 265 6.9E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c10490 6560d63c8a37113611b434d238e1c16b 342 Gene3D G3DSA:3.40.50.10800 114 325 2.7E-111 T 12-10-2018 CLSA_c10490 6560d63c8a37113611b434d238e1c16b 342 Gene3D G3DSA:3.40.50.10800 198 284 2.7E-111 T 12-10-2018 CLSA_c10490 6560d63c8a37113611b434d238e1c16b 342 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 325 1.6E-99 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLSA_c10490 6560d63c8a37113611b434d238e1c16b 342 Pfam PF02445 Quinolinate synthetase A protein 35 325 2.6E-115 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLSA_c10490 6560d63c8a37113611b434d238e1c16b 342 SUPERFAMILY SSF142754 31 326 8.5E-114 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLSA_c10490 6560d63c8a37113611b434d238e1c16b 342 Gene3D G3DSA:3.40.50.10800 34 309 2.7E-111 T 12-10-2018 CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 SMART SM00862 149 222 1.6E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 Gene3D G3DSA:3.40.50.2300 1 128 1.3E-34 T 12-10-2018 CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 Pfam PF00072 Response regulator receiver domain 4 112 9.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 SUPERFAMILY SSF52172 2 179 7.31E-38 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 SMART SM00448 2 112 1.7E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 1.1E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c06300 2e619cdff68f808c96fa71eb200f2dc2 225 Gene3D G3DSA:1.10.10.10 129 225 1.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c21920 9042922a961ffb597ec770e401587f41 380 SUPERFAMILY SSF53335 179 360 4.93E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c21920 9042922a961ffb597ec770e401587f41 380 Gene3D G3DSA:3.40.50.150 178 378 2.4E-57 T 12-10-2018 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 SMART SM00138 113 376 5.7E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 PRINTS PR00996 Glutamate methyltransferase family signature 240 256 1.6E-27 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 PRINTS PR00996 Glutamate methyltransferase family signature 333 356 1.6E-27 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 PRINTS PR00996 Glutamate methyltransferase family signature 314 328 1.6E-27 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 PRINTS PR00996 Glutamate methyltransferase family signature 208 228 1.6E-27 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 PRINTS PR00996 Glutamate methyltransferase family signature 172 184 1.6E-27 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c21920 9042922a961ffb597ec770e401587f41 380 Pfam PF01739 CheR methyltransferase, SAM binding domain 179 369 1.2E-44 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLSA_c36140 95bf71a8360769acc597ea2623c90691 403 Pfam PF00465 Iron-containing alcohol dehydrogenase 25 393 1.1E-93 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c36140 95bf71a8360769acc597ea2623c90691 403 SUPERFAMILY SSF56796 16 402 6.41E-92 T 12-10-2018 CLSA_c36140 95bf71a8360769acc597ea2623c90691 403 Gene3D G3DSA:1.20.1090.10 207 403 1.2E-37 T 12-10-2018 CLSA_c36140 95bf71a8360769acc597ea2623c90691 403 Gene3D G3DSA:3.40.50.1970 7 205 3.8E-55 T 12-10-2018 CLSA_c30760 d07ab6e8a3a92da0d7769dae6d00458c 213 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 3 212 21.738 T 12-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30760 d07ab6e8a3a92da0d7769dae6d00458c 213 Pfam PF01813 ATP synthase subunit D 12 207 7.8E-57 T 12-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30760 d07ab6e8a3a92da0d7769dae6d00458c 213 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 211 1.7E-47 T 12-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 131 34.155 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 Pfam PF00411 Ribosomal protein S11 21 130 7.1E-49 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 Gene3D G3DSA:3.30.420.80 3 131 3.5E-53 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 SUPERFAMILY SSF53137 16 131 1.77E-48 T 12-10-2018 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 PIRSF PIRSF002131 1 131 2.6E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 2.0E-58 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02290 58fc55ca2e243beb6719278c92f65953 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site CLSA_c14130 14ff00dc063560715a9c5fb0a20e3f7b 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 4.4E-67 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CLSA_c14130 14ff00dc063560715a9c5fb0a20e3f7b 185 Gene3D G3DSA:1.10.132.20 12 182 3.0E-65 T 12-10-2018 CLSA_c14130 14ff00dc063560715a9c5fb0a20e3f7b 185 Gene3D G3DSA:3.30.1360.40 31 105 3.0E-65 T 12-10-2018 CLSA_c14130 14ff00dc063560715a9c5fb0a20e3f7b 185 Pfam PF01765 Ribosome recycling factor 20 183 1.8E-62 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CLSA_c14130 14ff00dc063560715a9c5fb0a20e3f7b 185 SUPERFAMILY SSF55194 3 183 1.07E-68 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 CLSA_c14130 14ff00dc063560715a9c5fb0a20e3f7b 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.766 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CLSA_c15850 1b1259b4f61d0ebd35ff250de5b396ea 142 Gene3D G3DSA:3.10.580.10 1 141 1.3E-40 T 12-10-2018 CLSA_c15850 1b1259b4f61d0ebd35ff250de5b396ea 142 Pfam PF00571 CBS domain 68 117 2.1E-13 T 12-10-2018 IPR000644 CBS domain CLSA_c15850 1b1259b4f61d0ebd35ff250de5b396ea 142 Pfam PF00571 CBS domain 3 53 1.2E-13 T 12-10-2018 IPR000644 CBS domain CLSA_c15850 1b1259b4f61d0ebd35ff250de5b396ea 142 SMART SM00116 10 57 6.1E-8 T 12-10-2018 IPR000644 CBS domain CLSA_c15850 1b1259b4f61d0ebd35ff250de5b396ea 142 SMART SM00116 75 122 3.7E-10 T 12-10-2018 IPR000644 CBS domain CLSA_c15850 1b1259b4f61d0ebd35ff250de5b396ea 142 SUPERFAMILY SSF54631 1 117 2.4E-35 T 12-10-2018 CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 Gene3D G3DSA:2.30.30.280 217 276 7.9E-17 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 354 3.8E-111 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 Gene3D G3DSA:2.40.30.10 277 358 5.2E-27 T 12-10-2018 CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 355 41.349 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 SUPERFAMILY SSF52402 1 246 1.17E-59 T 12-10-2018 CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 Gene3D G3DSA:3.40.50.620 1 211 3.4E-86 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c13240 6d7dcb8511b898e270fa774b70646231 358 Pfam PF03054 tRNA methyl transferase 3 354 1.3E-123 T 12-10-2018 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 SUPERFAMILY SSF53850 91 288 1.53E-32 T 12-10-2018 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 Gene3D G3DSA:3.40.190.10 92 279 9.1E-31 T 12-10-2018 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 2.7E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 Gene3D G3DSA:1.10.10.10 1 70 1.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 Pfam PF03466 LysR substrate binding domain 91 286 3.0E-33 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 Gene3D G3DSA:3.40.190.10 163 268 9.1E-31 T 12-10-2018 CLSA_c36270 b9c71cb01c583ce41d8a2fecf7fbc7c0 290 SUPERFAMILY SSF46785 6 81 4.68E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c22000 4383e37980b713181eb8112322fa57de 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 113 4.1E-18 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CLSA_c22000 4383e37980b713181eb8112322fa57de 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 208 5.2E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c22000 4383e37980b713181eb8112322fa57de 225 Gene3D G3DSA:1.10.3720.10 8 225 4.8E-44 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c22000 4383e37980b713181eb8112322fa57de 225 SUPERFAMILY SSF161098 17 216 2.49E-38 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 Pfam PF00270 DEAD/DEAH box helicase 29 192 1.3E-53 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 Gene3D G3DSA:3.30.70.330 446 521 4.6E-14 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 SUPERFAMILY SSF52540 70 357 1.27E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 SMART SM00490 256 337 1.8E-32 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 Gene3D G3DSA:3.40.50.300 213 420 3.8E-56 T 12-10-2018 CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 Pfam PF03880 DbpA RNA binding domain 447 517 2.2E-20 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 SMART SM00487 23 220 5.7E-61 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 Pfam PF00271 Helicase conserved C-terminal domain 229 337 1.2E-31 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c44660 b6ec35fa5839d360784873400ce33a09 524 Gene3D G3DSA:3.40.50.300 1 208 7.4E-79 T 12-10-2018 CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.5E-12 T 12-10-2018 CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.5E-12 T 12-10-2018 CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 1.5E-12 T 12-10-2018 CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 194 8.3E-33 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 Gene3D G3DSA:3.50.50.60 4 115 3.0E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 SUPERFAMILY SSF51905 2 195 2.91E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 Gene3D G3DSA:3.50.50.60 116 196 3.0E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.5E-8 T 12-10-2018 CLSA_c23160 502c5cc1411ef69e35ce49dce82fa35b 198 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 1.5E-8 T 12-10-2018 CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 Gene3D G3DSA:2.40.30.20 10 97 2.3E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 Gene3D G3DSA:2.40.30.20 110 214 3.0E-34 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 SUPERFAMILY SSF63380 101 203 3.57E-33 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 SUPERFAMILY SSF63380 10 101 2.38E-23 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 11 213 1.7E-71 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 Pfam PF00677 Lumazine binding domain 12 95 4.5E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 Pfam PF00677 Lumazine binding domain 108 192 3.9E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14630 8ebfb598703dee72ab4f075391e3e74e 226 PIRSF PIRSF000498 10 221 1.9E-75 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 PIRSF PIRSF004749 1 136 6.6E-34 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 PRINTS PR01576 Peptide deformylase signature 30 59 1.2E-8 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 PRINTS PR01576 Peptide deformylase signature 113 136 1.2E-8 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 PRINTS PR01576 Peptide deformylase signature 83 94 1.2E-8 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 Pfam PF01327 Polypeptide deformylase 14 136 2.7E-25 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 Gene3D G3DSA:3.90.45.10 8 136 9.1E-31 T 12-10-2018 IPR036821 Peptide deformylase superfamily CLSA_c16050 08d0f91f07ea50079de9fb27b30dbaea 136 SUPERFAMILY SSF56420 4 136 4.45E-35 T 12-10-2018 IPR036821 Peptide deformylase superfamily CLSA_c26200 853860431aab249b43108970363c694a 298 SUPERFAMILY SSF46689 11 87 1.11E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c26200 853860431aab249b43108970363c694a 298 SUPERFAMILY SSF53697 108 264 2.22E-27 T 12-10-2018 CLSA_c26200 853860431aab249b43108970363c694a 298 Gene3D G3DSA:1.10.10.10 7 85 2.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26200 853860431aab249b43108970363c694a 298 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 84 3.9E-14 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c26200 853860431aab249b43108970363c694a 298 Pfam PF01380 SIS domain 136 262 1.4E-26 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c26200 853860431aab249b43108970363c694a 298 Gene3D G3DSA:3.40.50.10490 103 287 4.4E-36 T 12-10-2018 CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 315 2.1E-28 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 Gene3D G3DSA:3.40.50.720 96 286 3.4E-111 T 12-10-2018 CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 Gene3D G3DSA:3.40.50.720 16 315 3.4E-111 T 12-10-2018 CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 SUPERFAMILY SSF52283 1 134 3.21E-29 T 12-10-2018 CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 287 6.3E-55 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 SUPERFAMILY SSF51735 100 288 1.04E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c11270 9cd5cb3aecb4bb9d525eb7491e6e3c17 319 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 10 195 4.0E-56 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 6 197 34.117 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 75 91 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 SUPERFAMILY SSF55620 2 194 6.89E-58 T 12-10-2018 CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 Gene3D G3DSA:3.30.1130.10 66 197 1.6E-43 T 12-10-2018 CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 Pfam PF01227 GTP cyclohydrolase I 10 194 5.3E-64 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CLSA_c15610 ff3f61ee96f712e4e330dd35a6f9e8c3 197 Gene3D G3DSA:1.10.286.10 1 53 4.5E-20 T 12-10-2018 CLSA_c31330 ea0620347bcc48ebb1f696f5a27670b5 345 Gene3D G3DSA:3.90.1150.10 4 336 1.8E-87 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c31330 ea0620347bcc48ebb1f696f5a27670b5 345 SUPERFAMILY SSF53383 15 342 5.42E-60 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c31330 ea0620347bcc48ebb1f696f5a27670b5 345 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 202 211 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CLSA_c31330 ea0620347bcc48ebb1f696f5a27670b5 345 Gene3D G3DSA:3.40.640.10 38 252 1.8E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c31330 ea0620347bcc48ebb1f696f5a27670b5 345 Pfam PF00155 Aminotransferase class I and II 15 338 1.5E-37 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c21050 ed3460122214d4bdca204f4af574d12e 700 Pfam PF03170 Bacterial cellulose synthase subunit 38 611 9.8E-54 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CLSA_c21050 ed3460122214d4bdca204f4af574d12e 700 Gene3D G3DSA:2.60.120.260 334 467 1.2E-20 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c21050 ed3460122214d4bdca204f4af574d12e 700 Gene3D G3DSA:2.60.120.260 42 168 5.7E-11 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c22340 5daa5d2d2173b9f2a8b554ac4c4e3e57 289 SUPERFAMILY SSF55729 55 285 9.05E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c22340 5daa5d2d2173b9f2a8b554ac4c4e3e57 289 Gene3D G3DSA:3.40.630.30 133 288 4.2E-20 T 12-10-2018 CLSA_c22340 5daa5d2d2173b9f2a8b554ac4c4e3e57 289 Pfam PF00583 Acetyltransferase (GNAT) family 171 275 1.1E-11 T 12-10-2018 IPR000182 GNAT domain CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 SUPERFAMILY SSF54814 177 293 4.58E-39 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 Gene3D G3DSA:3.40.50.300 2 181 8.9E-50 T 12-10-2018 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 275 6.9E-94 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 SUPERFAMILY SSF52540 7 198 1.35E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 165 4.0E-31 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 Hamap MF_00367 GTPase Era [era]. 2 292 37.117 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 Pfam PF01926 50S ribosome-binding GTPase 7 121 4.4E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 Pfam PF07650 KH domain 204 281 7.5E-17 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c11000 276dbcf59b9bb3de458c4a91f4fd9217 296 Gene3D G3DSA:3.30.300.20 182 296 1.3E-39 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c30250 0dc63cacaa373a067fcdd7d206556b14 91 SMART SM00966 8 51 3.4E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c30250 0dc63cacaa373a067fcdd7d206556b14 91 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 8.8E-16 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c30250 0dc63cacaa373a067fcdd7d206556b14 91 SUPERFAMILY SSF89447 1 53 8.37E-17 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily CLSA_c30250 0dc63cacaa373a067fcdd7d206556b14 91 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 51 1.7E-12 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c30250 0dc63cacaa373a067fcdd7d206556b14 91 Gene3D G3DSA:2.10.260.10 1 54 1.2E-26 T 12-10-2018 CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 SUPERFAMILY SSF48498 83 192 4.22E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 Pfam PF13305 WHG domain 90 175 3.2E-10 T 12-10-2018 IPR025996 WHG domain CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 SUPERFAMILY SSF46689 5 78 6.48E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 Gene3D G3DSA:1.10.357.10 2 193 2.4E-38 T 12-10-2018 CLSA_c05680 7cf2de19138db00ea9141a6b2bd033e8 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.4E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 2.7E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 Pfam PF00072 Response regulator receiver domain 11 120 2.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 SMART SM00448 9 119 5.7E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 Gene3D G3DSA:3.40.50.12740 8 133 4.2E-42 T 12-10-2018 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 SMART SM00862 152 226 8.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 SUPERFAMILY SSF46894 131 227 9.35E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 SUPERFAMILY SSF52172 6 125 2.28E-41 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c07270 52d5c8a6f896c55b10335dc6c8079989 229 Gene3D G3DSA:1.10.10.10 134 229 9.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 5.1E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 5.1E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 606 624 5.1E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 713 727 5.1E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 766 1.2E-56 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Gene3D G3DSA:3.40.50.300 351 549 3.7E-67 T 12-10-2018 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 852 5.7E-26 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 307 7.9E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 SUPERFAMILY SSF52540 160 550 7.99E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Gene3D G3DSA:1.10.8.60 772 863 6.8E-27 T 12-10-2018 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 SUPERFAMILY SSF52540 551 853 3.35E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 SMART SM01086 772 861 4.7E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 SMART SM00382 602 754 3.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 SMART SM00382 201 346 6.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Gene3D G3DSA:3.40.50.300 555 770 2.4E-87 T 12-10-2018 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 860 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 636 654 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Gene3D G3DSA:3.40.50.300 161 350 6.1E-73 T 12-10-2018 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 SUPERFAMILY SSF81923 4 159 7.26E-39 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Gene3D G3DSA:1.10.1780.10 1 153 3.4E-30 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 68 8.2E-10 T 12-10-2018 IPR004176 Clp, N-terminal CLSA_c40220 3b8d1b4eaf1fd0a05a07d4fd9707a79e 864 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 148 1.2E-8 T 12-10-2018 IPR004176 Clp, N-terminal CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 Pfam PF00890 FAD binding domain 13 376 6.4E-28 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 PIRSF PIRSF000171 2 568 1.8E-209 T 12-10-2018 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 3.4E-8 T 12-10-2018 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 3.4E-8 T 12-10-2018 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 Gene3D G3DSA:3.50.50.60 10 428 6.1E-194 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 Gene3D G3DSA:3.90.700.10 246 351 6.1E-194 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 SUPERFAMILY SSF56425 233 351 2.41E-27 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 SUPERFAMILY SSF51905 8 407 5.15E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 SUPERFAMILY SSF46977 436 558 1.18E-22 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c38950 388fc6cfe16917cf49f5c109606f4bc4 568 Gene3D G3DSA:1.20.58.100 429 532 6.1E-194 T 12-10-2018 CLSA_c26670 7f891e3841c26e0f500ee7ca1e53ff89 247 Pfam PF01473 Putative cell wall binding repeat 49 67 0.0024 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c26670 7f891e3841c26e0f500ee7ca1e53ff89 247 SUPERFAMILY SSF69360 24 92 1.12E-13 T 12-10-2018 CLSA_c26670 7f891e3841c26e0f500ee7ca1e53ff89 247 Gene3D G3DSA:2.10.270.10 29 100 5.0E-12 T 12-10-2018 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 SMART SM00788 3 424 4.0E-294 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.4E-187 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 Gene3D G3DSA:3.90.170.10 267 428 8.0E-72 T 12-10-2018 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 SUPERFAMILY SSF52540 1 426 1.06E-178 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 208.092 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 Gene3D G3DSA:3.40.440.10 5 260 5.5E-106 T 12-10-2018 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 Gene3D G3DSA:1.10.300.10 102 201 5.5E-106 T 12-10-2018 CLSA_c45250 5a9ac7dae8ca08a588db5d9b86cca337 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 4.1E-177 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLSA_c28700 a21f708f7d357ce54c63d11781a01ea6 172 Gene3D G3DSA:3.40.50.2020 1 171 1.6E-63 T 12-10-2018 CLSA_c28700 a21f708f7d357ce54c63d11781a01ea6 172 SUPERFAMILY SSF53271 2 164 1.31E-49 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c28700 a21f708f7d357ce54c63d11781a01ea6 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 39.128 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CLSA_c28700 a21f708f7d357ce54c63d11781a01ea6 172 Pfam PF00156 Phosphoribosyl transferase domain 36 139 5.4E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c28700 a21f708f7d357ce54c63d11781a01ea6 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 9.4E-70 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SUPERFAMILY SSF47807 170 285 1.79E-33 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SUPERFAMILY SSF88723 1 167 7.52E-52 T 12-10-2018 IPR029060 PIN-like domain superfamily CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 167 3.2E-50 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 TIGRFAM TIGR00593 pola: DNA polymerase I 4 867 4.0E-291 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Pfam PF00476 DNA polymerase family A 492 865 2.2E-152 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Gene3D G3DSA:3.30.70.370 602 863 1.7E-104 T 12-10-2018 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Gene3D G3DSA:3.30.420.10 299 481 6.4E-22 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SMART SM00475 2 261 1.2E-128 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Gene3D G3DSA:1.20.1060.10 483 595 1.1E-39 T 12-10-2018 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Gene3D G3DSA:1.10.150.20 173 246 4.5E-97 T 12-10-2018 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 170 262 1.4E-34 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Gene3D G3DSA:3.40.50.1010 4 271 4.5E-97 T 12-10-2018 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Gene3D G3DSA:1.10.150.20 648 791 1.7E-104 T 12-10-2018 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 593 615 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 827 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 800 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 752 763 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 616 631 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 639 662 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 718 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 669 682 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 741 2.4E-74 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SMART SM00279 172 207 3.5E-18 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SUPERFAMILY SSF56672 462 867 5.67E-151 T 12-10-2018 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SUPERFAMILY SSF53098 301 434 3.64E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 ProSitePatterns PS00447 DNA polymerase family A signature. 693 712 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 Pfam PF01612 3'-5' exonuclease 298 430 2.5E-7 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CLSA_c11750 920edd94ccc564e8396fcde680c78773 867 SMART SM00482 624 831 1.4E-110 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 Pfam PF02743 Cache domain 43 267 7.1E-28 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 Gene3D G3DSA:3.30.450.20 142 283 4.9E-28 T 12-10-2018 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 Gene3D G3DSA:1.10.8.500 304 356 3.0E-7 T 12-10-2018 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 SUPERFAMILY SSF58104 334 662 4.19E-59 T 12-10-2018 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 447 616 8.1E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 SMART SM00283 388 663 6.0E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c19650 cd5cc5c6802d90e377ae422d1c7169cf 664 Gene3D G3DSA:1.10.287.950 357 663 3.8E-59 T 12-10-2018 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 SUPERFAMILY SSF47384 109 193 3.53E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 Gene3D G3DSA:3.30.565.10 190 344 2.2E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 127 191 5.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 324 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 301 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 343 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 SMART SM00387 236 344 2.7E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 Gene3D G3DSA:1.10.287.130 131 189 3.7E-16 T 12-10-2018 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 SUPERFAMILY SSF55874 183 344 2.49E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 Gene3D G3DSA:1.20.1480.50 48 129 9.0E-7 T 12-10-2018 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 343 1.3E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 SMART SM00304 71 125 8.5E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 SMART SM00388 126 192 1.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c37570 a7f86c7c3fb8dfb28f7a994bbe800fb2 344 SUPERFAMILY SSF158472 72 122 5.23E-6 T 12-10-2018 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 Gene3D G3DSA:3.30.230.10 4 154 9.8E-90 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 TIGRFAM TIGR00191 thrB: homoserine kinase 2 294 9.3E-86 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 82 93 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 SUPERFAMILY SSF55060 158 275 1.03E-31 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 Pfam PF08544 GHMP kinases C terminal 216 268 4.5E-7 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 Hamap MF_00384 Homoserine kinase [thrB]. 4 294 30.246 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 Pfam PF00288 GHMP kinases N terminal domain 77 136 7.9E-10 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 Gene3D G3DSA:3.30.70.890 155 261 9.8E-90 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 PRINTS PR00958 Homoserine kinase signature 9 24 4.1E-40 T 12-10-2018 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 PRINTS PR00958 Homoserine kinase signature 123 136 4.1E-40 T 12-10-2018 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 PRINTS PR00958 Homoserine kinase signature 89 104 4.1E-40 T 12-10-2018 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 PRINTS PR00958 Homoserine kinase signature 162 179 4.1E-40 T 12-10-2018 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 PRINTS PR00958 Homoserine kinase signature 241 256 4.1E-40 T 12-10-2018 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 PIRSF PIRSF000676 1 295 8.3E-93 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CLSA_c31510 d1e919832328acc7f4b27a79a1dc99d7 298 SUPERFAMILY SSF54211 1 147 2.28E-29 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c00850 450e9f8fe9d2806d0b2a3c92285a477e 282 Gene3D G3DSA:3.30.1180.10 154 280 7.6E-33 T 12-10-2018 CLSA_c00850 450e9f8fe9d2806d0b2a3c92285a477e 282 SUPERFAMILY SSF82549 1 278 2.09E-78 T 12-10-2018 CLSA_c00850 450e9f8fe9d2806d0b2a3c92285a477e 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 4.5E-83 T 12-10-2018 IPR003797 DegV CLSA_c00850 450e9f8fe9d2806d0b2a3c92285a477e 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 278 1.5E-81 T 12-10-2018 IPR003797 DegV CLSA_c00850 450e9f8fe9d2806d0b2a3c92285a477e 282 Gene3D G3DSA:3.40.50.10170 1 152 5.9E-50 T 12-10-2018 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 Gene3D G3DSA:3.40.50.2300 185 351 3.5E-79 T 12-10-2018 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 Gene3D G3DSA:1.10.10.10 4 70 5.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 3.4E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 3.4E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 SUPERFAMILY SSF53822 79 354 2.36E-59 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 SMART SM00345 11 70 7.4E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 Gene3D G3DSA:3.40.50.2300 82 346 3.5E-79 T 12-10-2018 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 SUPERFAMILY SSF46785 5 74 2.39E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 69 3.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c07570 e32216b2b4a4fa4691c2f81753af1725 357 Pfam PF13377 Periplasmic binding protein-like domain 194 354 1.3E-32 T 12-10-2018 CLSA_c40200 f287374420c8142f6c72f049bcf42444 325 Pfam PF03576 Peptidase family S58 7 310 6.2E-47 T 12-10-2018 IPR005321 Peptidase S58, DmpA CLSA_c40200 f287374420c8142f6c72f049bcf42444 325 Gene3D G3DSA:3.60.70.12 1 306 2.7E-107 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c40200 f287374420c8142f6c72f049bcf42444 325 SUPERFAMILY SSF56266 7 322 2.04E-61 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c41150 3e108ff1dbe0c0cdfc7626f6e4f38618 85 SUPERFAMILY SSF160544 2 82 9.16E-22 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CLSA_c41150 3e108ff1dbe0c0cdfc7626f6e4f38618 85 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 77 5.6E-19 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c41150 3e108ff1dbe0c0cdfc7626f6e4f38618 85 Gene3D G3DSA:3.40.1690.10 4 85 3.2E-23 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 Gene3D G3DSA:3.40.35.10 157 319 6.6E-50 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 SUPERFAMILY SSF53062 1 128 7.06E-40 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 Pfam PF03830 PTS system sorbose subfamily IIB component 160 307 1.4E-49 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 107 9.2E-31 T 12-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 Pfam PF03610 PTS system fructose IIA component 3 116 3.3E-37 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 SUPERFAMILY SSF52728 159 316 6.41E-52 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c09640 8e1ad16fe49ba4d3a6c74b696151f835 325 Gene3D G3DSA:3.40.50.510 1 142 4.1E-43 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 SUPERFAMILY SSF56024 97 324 3.59E-49 T 12-10-2018 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 Gene3D G3DSA:3.30.870.10 323 465 1.0E-23 T 12-10-2018 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 494 3.2E-144 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 56 3.7E-10 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 SMART SM00155 407 434 0.0095 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 SMART SM00155 212 239 7.1E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 Gene3D G3DSA:3.30.870.10 106 311 6.0E-44 T 12-10-2018 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 SUPERFAMILY SSF56024 264 477 1.84E-42 T 12-10-2018 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 Pfam PF13091 PLD-like domain 336 460 7.6E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 Pfam PF13091 PLD-like domain 130 256 1.1E-13 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CLSA_c38330 3e884d174a37e4148bec8912aff8b82b 494 Hamap MF_01916 Cardiolipin synthase. 8 494 40.515 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 6.7E-67 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 SUPERFAMILY SSF54211 4 87 6.32E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 Gene3D G3DSA:3.30.230.40 1 91 1.2E-35 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 Gene3D G3DSA:3.30.230.40 92 195 1.0E-40 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 195 41.584 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLSA_c31320 4f2ef99c6838d52c4659ba73308ebda3 195 SUPERFAMILY SSF54211 89 179 9.99E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c18810 a9aa4c4d3f5d98eb440fbbbe0291436a 265 Pfam PF04445 Putative SAM-dependent methyltransferase 83 230 3.9E-15 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CLSA_c18810 a9aa4c4d3f5d98eb440fbbbe0291436a 265 Gene3D G3DSA:3.40.50.150 73 259 6.3E-36 T 12-10-2018 CLSA_c18810 a9aa4c4d3f5d98eb440fbbbe0291436a 265 SUPERFAMILY SSF53335 5 260 1.74E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c07230 d6add4dc44fc16b262567798acbe10bc 551 SUPERFAMILY SSF55186 65 234 1.16E-31 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CLSA_c07230 d6add4dc44fc16b262567798acbe10bc 551 Gene3D G3DSA:3.40.50.300 220 494 2.9E-56 T 12-10-2018 CLSA_c07230 d6add4dc44fc16b262567798acbe10bc 551 Gene3D G3DSA:3.30.980.10 65 218 1.1E-21 T 12-10-2018 CLSA_c07230 d6add4dc44fc16b262567798acbe10bc 551 SUPERFAMILY SSF52540 281 482 3.43E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07230 d6add4dc44fc16b262567798acbe10bc 551 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 287 484 1.5E-16 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 CLSA_c07410 69607a012432086cc914f122cecea5e9 230 Gene3D G3DSA:3.20.20.140 1 225 1.0E-45 T 12-10-2018 CLSA_c07410 69607a012432086cc914f122cecea5e9 230 SMART SM00481 5 70 1.5E-18 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLSA_c07410 69607a012432086cc914f122cecea5e9 230 Pfam PF02811 PHP domain 6 121 2.6E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c07410 69607a012432086cc914f122cecea5e9 230 SUPERFAMILY SSF89550 1 226 1.2E-43 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 Pfam PF00375 Sodium:dicarboxylate symporter family 13 401 9.1E-94 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 Gene3D G3DSA:1.10.3860.10 2 405 1.5E-76 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 SUPERFAMILY SSF118215 12 401 3.01E-80 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 PRINTS PR00173 Glutamate-aspartate symporter signature 144 166 2.7E-16 T 12-10-2018 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 2.7E-16 T 12-10-2018 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 PRINTS PR00173 Glutamate-aspartate symporter signature 191 210 2.7E-16 T 12-10-2018 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 2.7E-16 T 12-10-2018 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 2.7E-16 T 12-10-2018 CLSA_c31460 6fcd6c68c0248abdb28852cce96f8163 406 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 2.7E-16 T 12-10-2018 CLSA_c03340 b212bcdf0df5652f4c24e314660a2043 370 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 252 325 5.1E-12 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal CLSA_c03340 b212bcdf0df5652f4c24e314660a2043 370 Pfam PF12323 Helix-turn-helix domain 1 46 3.2E-16 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain CLSA_c03340 b212bcdf0df5652f4c24e314660a2043 370 Pfam PF01385 Probable transposase 166 285 1.6E-14 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLSA_c03340 b212bcdf0df5652f4c24e314660a2043 370 Pfam PF07282 Putative transposase DNA-binding domain 299 367 1.7E-24 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal CLSA_c09330 f27fa37bacdd8eaa3f58b795fa9dcaca 627 Pfam PF00069 Protein kinase domain 170 416 5.2E-47 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c09330 f27fa37bacdd8eaa3f58b795fa9dcaca 627 Gene3D G3DSA:1.10.510.10 160 437 7.7E-58 T 12-10-2018 CLSA_c09330 f27fa37bacdd8eaa3f58b795fa9dcaca 627 SMART SM00220 167 403 3.2E-43 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c09330 f27fa37bacdd8eaa3f58b795fa9dcaca 627 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 282 294 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CLSA_c09330 f27fa37bacdd8eaa3f58b795fa9dcaca 627 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 173 196 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 CLSA_c09330 f27fa37bacdd8eaa3f58b795fa9dcaca 627 SUPERFAMILY SSF56112 167 400 5.93E-59 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c43390 6db7150213e2161dba39dda93a5b6a59 248 Pfam PF13145 PPIC-type PPIASE domain 94 217 6.9E-24 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CLSA_c43390 6db7150213e2161dba39dda93a5b6a59 248 Gene3D G3DSA:1.10.4030.30 65 217 1.1E-39 T 12-10-2018 CLSA_c43390 6db7150213e2161dba39dda93a5b6a59 248 SUPERFAMILY SSF109998 3 142 2.09E-19 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily CLSA_c43390 6db7150213e2161dba39dda93a5b6a59 248 SUPERFAMILY SSF54534 106 202 6.02E-32 T 12-10-2018 CLSA_c43390 6db7150213e2161dba39dda93a5b6a59 248 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 143 163 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CLSA_c43390 6db7150213e2161dba39dda93a5b6a59 248 Gene3D G3DSA:3.10.50.40 114 205 1.1E-39 T 12-10-2018 CLSA_c41660 1b4accdc693897fc90cf1b1e95971a89 296 Gene3D G3DSA:2.160.10.10 99 284 3.2E-42 T 12-10-2018 CLSA_c41660 1b4accdc693897fc90cf1b1e95971a89 296 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 268 5.8E-4 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c41660 1b4accdc693897fc90cf1b1e95971a89 296 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 141 8.2E-7 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c41660 1b4accdc693897fc90cf1b1e95971a89 296 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 198 233 5.4E-9 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c41660 1b4accdc693897fc90cf1b1e95971a89 296 SUPERFAMILY SSF51161 35 290 3.46E-44 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Gene3D G3DSA:3.30.70.100 1 68 5.3E-20 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 SUPERFAMILY SSF55008 2 68 3.01E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 137 1.8E-12 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 67 1.6E-13 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Pfam PF00403 Heavy-metal-associated domain 6 65 2.0E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Pfam PF00403 Heavy-metal-associated domain 75 136 9.2E-18 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Pfam PF00122 E1-E2 ATPase 301 480 1.2E-54 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 SUPERFAMILY SSF56784 499 813 2.33E-65 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 214 233 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 194 212 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 271 290 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 117 137 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 683 700 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 291 309 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 424 438 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 484 499 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00943 Copper-transporting ATPase signature 740 754 3.5E-25 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Gene3D G3DSA:3.40.50.1000 482 758 1.7E-101 T 12-10-2018 IPR023214 HAD superfamily CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Gene3D G3DSA:3.40.1110.10 512 638 1.7E-101 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 SUPERFAMILY SSF55008 70 138 5.76E-21 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 SUPERFAMILY SSF81653 304 401 1.83E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 273 786 5.9E-99 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 SUPERFAMILY SSF81665 268 802 4.45E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Gene3D G3DSA:3.30.70.100 70 155 1.3E-20 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 211 816 6.9E-184 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 815 1.1E-199 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00942 Copper-transporting ATPase 1 signature 96 117 3.1E-7 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00942 Copper-transporting ATPase 1 signature 212 237 3.1E-7 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 3.1E-7 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 720 1.1E-47 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 Gene3D G3DSA:2.70.150.20 294 406 2.2E-42 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 5.9E-30 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 351 365 5.9E-30 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 5.9E-30 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 5.9E-30 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 5.9E-30 T 12-10-2018 CLSA_c42790 e4c3f9c6e35c229073882bc6c24d76db 820 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.9E-30 T 12-10-2018 CLSA_c26910 2471d9e93294ecf36daa90c6bcbddd39 178 Pfam PF12685 SpoIIIAH-like protein 44 170 1.7E-21 T 12-10-2018 IPR024232 Stage III sporulation protein AH-like CLSA_c26910 2471d9e93294ecf36daa90c6bcbddd39 178 Gene3D G3DSA:3.30.300.270 65 178 1.2E-21 T 12-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Pfam PF01584 CheW-like domain 551 682 6.4E-15 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SUPERFAMILY SSF50341 545 681 1.44E-21 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Gene3D G3DSA:1.10.287.560 298 359 8.9E-16 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Gene3D G3DSA:3.30.565.10 360 545 1.1E-53 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Pfam PF07194 P2 response regulator binding domain 160 242 6.3E-15 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SUPERFAMILY SSF55874 361 544 3.14E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SMART SM01231 297 359 2.3E-16 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SUPERFAMILY SSF47384 299 360 2.16E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Gene3D G3DSA:2.40.50.180 569 633 3.0E-33 T 12-10-2018 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SMART SM00387 404 546 7.4E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SUPERFAMILY SSF55052 159 241 1.7E-10 T 12-10-2018 IPR035891 CheY-binding domain of CheA CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Gene3D G3DSA:1.20.120.160 1 138 2.0E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 298 359 1.2E-14 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SMART SM00260 538 681 8.2E-20 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SUPERFAMILY SSF47226 1 119 1.16E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Pfam PF01627 Hpt domain 1 74 6.1E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 SMART SM00073 1 98 6.3E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Gene3D G3DSA:2.30.30.40 546 676 3.0E-33 T 12-10-2018 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 500 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 543 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c24190 c99427a42eb336697125d0a82f8be544 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 545 2.1E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 Pfam PF12704 MacB-like periplasmic core domain 281 508 1.6E-12 T 12-10-2018 IPR025857 MacB-like periplasmic core domain CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 SUPERFAMILY SSF52540 3 229 1.73E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 Pfam PF00005 ABC transporter 25 172 6.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 SMART SM00382 33 220 2.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 Gene3D G3DSA:3.40.50.300 1 248 1.1E-68 T 12-10-2018 CLSA_c42150 c1fa33ec858da66a184b01eab16ae8d8 662 Pfam PF02687 FtsX-like permease family 563 655 7.1E-16 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c22610 2d371afb72226f67557db5d764028b09 330 Gene3D G3DSA:3.20.20.140 2 330 3.8E-105 T 12-10-2018 CLSA_c22610 2d371afb72226f67557db5d764028b09 330 SUPERFAMILY SSF51556 4 329 1.58E-81 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c22610 2d371afb72226f67557db5d764028b09 330 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 327 3.5E-91 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CLSA_c22610 2d371afb72226f67557db5d764028b09 330 Hamap MF_00540 Adenosine deaminase [add]. 1 330 53.113 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CLSA_c22610 2d371afb72226f67557db5d764028b09 330 Pfam PF00962 Adenosine/AMP deaminase 6 326 4.8E-74 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CLSA_c26890 645afca8874153c05ba6eb71d3775046 133 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 133 20.026 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 CLSA_c26890 645afca8874153c05ba6eb71d3775046 133 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 132 6.5E-41 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 CLSA_c26890 645afca8874153c05ba6eb71d3775046 133 Gene3D G3DSA:1.10.940.10 1 133 2.5E-41 T 12-10-2018 IPR035926 NusB-like superfamily CLSA_c26890 645afca8874153c05ba6eb71d3775046 133 SUPERFAMILY SSF48013 3 132 1.44E-35 T 12-10-2018 IPR035926 NusB-like superfamily CLSA_c26890 645afca8874153c05ba6eb71d3775046 133 Pfam PF01029 NusB family 6 131 3.4E-35 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 Gene3D G3DSA:3.30.450.20 162 319 8.3E-22 T 12-10-2018 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 664 4.3E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 SMART SM00283 436 704 2.8E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 SUPERFAMILY SSF103190 105 202 1.04E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 Pfam PF02743 Cache domain 58 318 6.0E-32 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 Gene3D G3DSA:1.20.1480.50 320 409 2.0E-12 T 12-10-2018 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 Gene3D G3DSA:1.10.287.950 410 711 5.6E-54 T 12-10-2018 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 SMART SM00304 355 407 4.3E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c42510 05d02f92c67d33d0654ddbd076f226fb 713 SUPERFAMILY SSF58104 375 710 3.4E-57 T 12-10-2018 CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 Pfam PF00005 ABC transporter 33 176 2.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 Pfam PF00005 ABC transporter 280 432 2.2E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 Gene3D G3DSA:3.40.50.300 274 511 2.4E-40 T 12-10-2018 CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 SUPERFAMILY SSF52540 17 237 2.31E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 SMART SM00382 288 481 2.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 SMART SM00382 42 231 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 SUPERFAMILY SSF52540 278 489 9.69E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c21400 5c9e2fc0132d936b2e599d284abb62f5 513 Gene3D G3DSA:3.40.50.300 3 254 3.2E-57 T 12-10-2018 CLSA_c07210 9c46e1b4d4dfa6bae9ec93878e79a050 126 Pfam PF14276 Domain of unknown function (DUF4363) 7 125 5.0E-24 T 12-10-2018 IPR025373 Protein of unknown function DUF4363 CLSA_c38630 c55f51a7f5f3952520a4cd8ac4b3f5b8 363 Pfam PF01966 HD domain 148 269 3.2E-16 T 12-10-2018 IPR006674 HD domain CLSA_c38630 c55f51a7f5f3952520a4cd8ac4b3f5b8 363 Gene3D G3DSA:1.10.3210.10 7 311 6.6E-61 T 12-10-2018 CLSA_c38630 c55f51a7f5f3952520a4cd8ac4b3f5b8 363 SUPERFAMILY SSF109604 132 308 6.54E-32 T 12-10-2018 CLSA_c38630 c55f51a7f5f3952520a4cd8ac4b3f5b8 363 SMART SM00471 143 279 4.1E-7 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 227 238 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 Gene3D G3DSA:3.30.70.20 192 246 3.3E-10 T 12-10-2018 CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 Pfam PF13187 4Fe-4S dicluster domain 198 242 4.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 SUPERFAMILY SSF52218 5 121 6.99E-10 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 Gene3D G3DSA:3.40.50.360 7 152 7.9E-7 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c36860 8b25aed6f39fe95240a108867ce06444 267 SUPERFAMILY SSF54862 192 255 7.48E-16 T 12-10-2018 CLSA_c11790 0962093df0cc2fb5661fba470a8beaf7 250 Gene3D G3DSA:3.40.50.300 64 249 9.6E-50 T 12-10-2018 CLSA_c11790 0962093df0cc2fb5661fba470a8beaf7 250 SUPERFAMILY SSF52540 68 230 4.53E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11790 0962093df0cc2fb5661fba470a8beaf7 250 SMART SM00382 100 232 1.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c11790 0962093df0cc2fb5661fba470a8beaf7 250 Pfam PF01695 IstB-like ATP binding protein 58 232 4.9E-58 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CLSA_c11790 0962093df0cc2fb5661fba470a8beaf7 250 PIRSF PIRSF003073 1 250 8.8E-73 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLSA_c11350 7947764101853c490f45df2ad379f27d 179 SUPERFAMILY SSF47413 1 67 9.01E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c11350 7947764101853c490f45df2ad379f27d 179 SUPERFAMILY SSF51182 54 179 3.15E-31 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c11350 7947764101853c490f45df2ad379f27d 179 Pfam PF07883 Cupin domain 105 173 3.7E-18 T 12-10-2018 IPR013096 Cupin 2, conserved barrel CLSA_c11350 7947764101853c490f45df2ad379f27d 179 Pfam PF12844 Helix-turn-helix domain 4 65 1.5E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c11350 7947764101853c490f45df2ad379f27d 179 Gene3D G3DSA:1.10.260.40 1 68 6.7E-19 T 12-10-2018 CLSA_c11350 7947764101853c490f45df2ad379f27d 179 SMART SM00530 6 61 2.1E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c11350 7947764101853c490f45df2ad379f27d 179 Gene3D G3DSA:2.60.120.10 69 174 1.4E-22 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c23060 9c77d44b01263726fc584ea812f117fe 125 Gene3D G3DSA:2.30.110.40 3 125 4.9E-19 T 12-10-2018 IPR038628 XkdM-like superfamily CLSA_c23060 9c77d44b01263726fc584ea812f117fe 125 SUPERFAMILY SSF69279 7 120 2.55E-18 T 12-10-2018 CLSA_c23060 9c77d44b01263726fc584ea812f117fe 125 Pfam PF09393 Phage tail tube protein 3 114 9.4E-19 T 12-10-2018 IPR018989 Phage tail tube protein CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:2.40.30.170 40 53 1.2E-16 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 SUPERFAMILY SSF111369 46 128 5.89E-10 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:2.40.50.100 54 87 1.2E-16 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 192 323 2.5E-31 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 321 5.3E-26 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:1.10.287.470 88 114 1.2E-16 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:2.40.50.100 218 252 7.6E-28 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:1.10.287.470 185 217 7.6E-28 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 SUPERFAMILY SSF111369 187 326 3.4E-23 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:1.10.287.470 123 183 3.0E-7 T 12-10-2018 CLSA_c10140 599d9f2226c15b3e4d2c44f5aee490ed 327 Gene3D G3DSA:2.40.30.170 253 322 7.6E-28 T 12-10-2018 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 Gene3D G3DSA:3.40.190.10 90 286 1.1E-42 T 12-10-2018 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 Gene3D G3DSA:1.10.10.10 1 89 7.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 SUPERFAMILY SSF46785 1 86 2.31E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 Gene3D G3DSA:3.40.190.10 164 264 1.1E-42 T 12-10-2018 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 Pfam PF03466 LysR substrate binding domain 87 289 2.9E-43 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c37880 9970b5d30938c60933d77aee737b97f8 306 SUPERFAMILY SSF53850 87 289 9.96E-41 T 12-10-2018 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 SUPERFAMILY SSF47384 198 272 9.61E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 Gene3D G3DSA:3.30.565.10 281 431 4.2E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 Gene3D G3DSA:1.10.287.130 195 272 3.3E-13 T 12-10-2018 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 SMART SM00388 207 274 2.2E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 429 8.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 SUPERFAMILY SSF55874 278 429 4.45E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 SMART SM00387 319 431 9.9E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c00590 1faabd2819c7e7e53c2f2ff9d825ea56 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 272 4.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 Gene3D G3DSA:3.40.50.880 249 437 2.9E-24 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 SUPERFAMILY SSF52540 1 228 1.22E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 Gene3D G3DSA:3.40.50.300 1 247 2.0E-53 T 12-10-2018 CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 SUPERFAMILY SSF52317 191 402 1.86E-34 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 Pfam PF13500 AAA domain 4 227 4.6E-21 T 12-10-2018 CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 493 9.2E-153 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 443 1.2E-50 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CLSA_c31960 8172b16353de5d3508890b6b08a41d8d 499 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 499 154.412 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CLSA_c38540 7b74dcffbc03b8685d7a2cab553be9a6 256 Gene3D G3DSA:3.30.428.10 58 133 1.3E-10 T 12-10-2018 IPR036265 HIT-like superfamily CLSA_c38540 7b74dcffbc03b8685d7a2cab553be9a6 256 Pfam PF16285 Domain of unknown function (DUF4931) 9 255 8.1E-110 T 12-10-2018 CLSA_c38540 7b74dcffbc03b8685d7a2cab553be9a6 256 SUPERFAMILY SSF54197 25 131 1.19E-21 T 12-10-2018 IPR036265 HIT-like superfamily CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 271 4.6E-98 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 SUPERFAMILY SSF53167 3 273 1.57E-93 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 25 270 1.1E-100 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 Pfam PF01048 Phosphorylase superfamily 24 270 2.4E-51 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 PIRSF PIRSF000477 1 273 5.2E-99 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 Gene3D G3DSA:3.40.50.1580 1 272 1.7E-109 T 12-10-2018 CLSA_c32540 41bd1fc1f9ae523f9a6786f0c615368c 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 CLSA_c39180 c8eec7743700bf2ef0673a24ee2bb98d 213 Gene3D G3DSA:2.40.10.220 96 208 4.2E-11 T 12-10-2018 CLSA_c39180 c8eec7743700bf2ef0673a24ee2bb98d 213 SUPERFAMILY SSF141371 127 203 3.53E-6 T 12-10-2018 CLSA_c39180 c8eec7743700bf2ef0673a24ee2bb98d 213 Pfam PF07238 PilZ domain 95 203 3.2E-15 T 12-10-2018 IPR009875 PilZ domain GO:0035438 CLSA_c39180 c8eec7743700bf2ef0673a24ee2bb98d 213 Pfam PF12945 Flagellar protein YcgR 7 88 6.0E-17 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLSA_c35690 faa1673f203cff85855a05249967152a 272 Pfam PF01695 IstB-like ATP binding protein 131 238 9.8E-18 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CLSA_c35690 faa1673f203cff85855a05249967152a 272 Gene3D G3DSA:3.40.50.300 77 260 1.5E-39 T 12-10-2018 CLSA_c35690 faa1673f203cff85855a05249967152a 272 SUPERFAMILY SSF52540 96 250 5.4E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 Pfam PF12844 Helix-turn-helix domain 7 68 1.1E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SUPERFAMILY SSF47413 5 64 8.59E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SUPERFAMILY SSF48452 147 418 2.15E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 Gene3D G3DSA:1.25.40.10 306 421 1.3E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 Pfam PF13181 Tetratricopeptide repeat 275 302 0.025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 Gene3D G3DSA:1.10.260.40 5 69 5.5E-12 T 12-10-2018 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SMART SM00028 192 225 36.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SMART SM00028 348 381 230.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SMART SM00028 388 421 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SMART SM00028 269 302 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c40230 f6c111c1a841db7ca73f59715b4dc9e8 421 SMART SM00028 149 182 360.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 334 6.9E-95 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 SMART SM00640 31 445 8.3E-121 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 SUPERFAMILY SSF49899 338 481 1.35E-21 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 338 478 2.3E-13 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 Gene3D G3DSA:2.115.10.20 3 353 6.2E-103 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 19 456 1.0E-149 T 12-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 Gene3D G3DSA:2.60.120.560 354 481 2.4E-16 T 12-10-2018 CLSA_c44280 3ffd45c6d2050a52bf78e9ed330b6f3a 486 SUPERFAMILY SSF75005 23 334 2.14E-97 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 SUPERFAMILY SSF46557 3 76 6.15E-20 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 Gene3D G3DSA:3.10.50.30 76 154 2.1E-16 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 Gene3D G3DSA:1.10.287.180 1 75 3.9E-22 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.6E-19 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 154 27.888 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 153 4.1E-18 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 153 2.1E-41 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 SUPERFAMILY SSF54534 80 153 1.44E-15 T 12-10-2018 CLSA_c37490 63dbada7e662b0abd6141891243036ab 154 PIRSF PIRSF006092 1 154 4.1E-46 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CLSA_c34290 82dea5b6db5fba3edff465c4e90d31ea 343 SUPERFAMILY SSF48452 91 303 3.74E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c34290 82dea5b6db5fba3edff465c4e90d31ea 343 Gene3D G3DSA:1.10.260.40 1 64 1.0E-15 T 12-10-2018 CLSA_c34290 82dea5b6db5fba3edff465c4e90d31ea 343 Pfam PF01381 Helix-turn-helix 7 58 8.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c34290 82dea5b6db5fba3edff465c4e90d31ea 343 SMART SM00530 6 61 4.1E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c34290 82dea5b6db5fba3edff465c4e90d31ea 343 Gene3D G3DSA:1.25.40.10 81 295 2.0E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c34290 82dea5b6db5fba3edff465c4e90d31ea 343 SUPERFAMILY SSF47413 1 67 1.26E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 250 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 Gene3D G3DSA:2.60.120.10 10 115 1.2E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 SUPERFAMILY SSF51215 17 96 2.88E-10 T 12-10-2018 IPR037923 Transcription regulator HTH-like CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 Pfam PF02311 AraC-like ligand binding domain 19 72 2.6E-10 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 Pfam PF12833 Helix-turn-helix domain 179 254 2.2E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 2.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 2.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 Gene3D G3DSA:1.10.10.60 205 254 3.8E-16 T 12-10-2018 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 SUPERFAMILY SSF46689 208 254 4.39E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 SMART SM00342 171 254 2.8E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36760 2c24bec16d8b846f80d83b6d96238d43 254 Gene3D G3DSA:1.10.10.60 154 204 3.6E-11 T 12-10-2018 CLSA_c35620 4cb0270c3d78bd1de9eab19a072b3735 315 Pfam PF03592 Terminase small subunit 102 267 6.8E-35 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 CLSA_c35620 4cb0270c3d78bd1de9eab19a072b3735 315 Pfam PF10668 Phage terminase small subunit 10 50 5.4E-5 T 12-10-2018 IPR018925 Phage terminase small subunit CLSA_c35620 4cb0270c3d78bd1de9eab19a072b3735 315 Gene3D G3DSA:1.10.10.1400 98 164 1.2E-7 T 12-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 SUPERFAMILY SSF50104 126 272 9.03E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 Gene3D G3DSA:4.10.950.10 196 276 1.8E-33 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 PIRSF PIRSF002158 3 276 1.9E-100 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 47.82 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 8.0E-135 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 Gene3D G3DSA:2.30.30.30 118 195 2.2E-34 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 8.6E-35 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 SUPERFAMILY SSF50249 2 125 1.86E-50 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 SMART SM01383 42 118 3.2E-46 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 Gene3D G3DSA:2.40.50.140 1 114 2.0E-47 T 12-10-2018 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 SMART SM01382 124 253 1.5E-91 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CLSA_c02040 0d606a469dbbd16fd3a267a23138d7ab 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.1E-55 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CLSA_c12230 d0eb055e8b0264f23b564d745f37de69 242 Pfam PF04463 Protein of unknown function (DUF523) 3 144 1.8E-42 T 12-10-2018 IPR007553 Domain of unknown function DUF523 CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 351 1.6E-43 T 12-10-2018 IPR000160 GGDEF domain CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 Gene3D G3DSA:3.30.70.270 194 355 4.1E-45 T 12-10-2018 CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 SMART SM00267 184 353 9.5E-47 T 12-10-2018 IPR000160 GGDEF domain CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 349 2.0E-41 T 12-10-2018 IPR000160 GGDEF domain CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 Pfam PF13492 GAF domain 68 184 4.5E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 SUPERFAMILY SSF55073 202 351 1.57E-40 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 SMART SM00065 58 192 0.006 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 Gene3D G3DSA:3.30.450.40 45 193 5.3E-13 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c41200 ff64f640eeda7f6b58c42f033d45950d 357 SUPERFAMILY SSF55781 41 195 5.89E-14 T 12-10-2018 CLSA_c07290 eb1138d61fae47e5711fc980831206f6 352 PIRSF PIRSF006268 5 341 2.6E-109 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CLSA_c07290 eb1138d61fae47e5711fc980831206f6 352 SUPERFAMILY SSF143631 35 336 8.37E-92 T 12-10-2018 IPR003374 ApbE-like superfamily CLSA_c07290 eb1138d61fae47e5711fc980831206f6 352 Pfam PF02424 ApbE family 43 320 1.5E-82 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CLSA_c07290 eb1138d61fae47e5711fc980831206f6 352 Gene3D G3DSA:3.10.520.20 27 349 4.6E-107 T 12-10-2018 CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 Gene3D G3DSA:3.40.50.720 6 247 9.3E-81 T 12-10-2018 CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 7.7E-66 T 12-10-2018 CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 SUPERFAMILY SSF51735 6 246 2.67E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c27920 091db8fb32601d2293de570aa894a1fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 308 4.8E-140 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 SUPERFAMILY SSF53686 3 308 3.8E-107 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 Gene3D G3DSA:3.40.50.1100 48 149 7.0E-131 T 12-10-2018 CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 297 4.9E-75 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 Gene3D G3DSA:3.40.50.1100 10 303 7.0E-131 T 12-10-2018 CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 308 3.0E-135 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLSA_c08570 7a490623c15da781540ab79cd98669fa 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 SUPERFAMILY SSF55124 270 401 4.51E-22 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 135 287 1.1E-38 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 SUPERFAMILY SSF56014 135 293 1.96E-45 T 12-10-2018 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Gene3D G3DSA:3.30.413.10 389 529 3.3E-33 T 12-10-2018 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 393 528 5.9E-13 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 SUPERFAMILY SSF56014 390 526 1.22E-30 T 12-10-2018 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 PRINTS PR00397 Sirohaem Fe-binding site signature 390 408 5.4E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 PRINTS PR00397 Sirohaem Fe-binding site signature 434 452 5.4E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 58 126 2.1E-17 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 313 373 4.8E-15 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Gene3D G3DSA:3.90.480.20 13 378 1.4E-139 T 12-10-2018 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 Gene3D G3DSA:3.30.413.10 127 307 1.4E-139 T 12-10-2018 CLSA_c23430 aa8845b748d30e639adb1b3d18c804e8 529 SUPERFAMILY SSF55124 10 134 9.74E-30 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c45040 4577a4e8aea3cf5f82f2af44118eb057 655 Pfam PF03235 Protein of unknown function DUF262 8 244 5.6E-31 T 12-10-2018 IPR004919 Domain of unknown function DUF262 CLSA_c45040 4577a4e8aea3cf5f82f2af44118eb057 655 Pfam PF07510 Protein of unknown function (DUF1524) 493 626 1.3E-15 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 349 6.4E-68 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 SUPERFAMILY SSF52540 78 354 4.46E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 PIRSF PIRSF039114 1 459 3.6E-239 T 12-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 SUPERFAMILY SSF47917 362 421 4.71E-5 T 12-10-2018 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 458 59.772 T 12-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 Gene3D G3DSA:3.40.50.12240 1 458 6.0E-188 T 12-10-2018 CLSA_c30770 b0a62cad1b713d273f800260f985441d 459 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 4.1E-11 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c13840 6d8a26fd178ffe4c711561fcb4c2dec5 402 Pfam PF05636 HIGH Nucleotidyl Transferase 5 386 2.5E-142 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 CLSA_c13840 6d8a26fd178ffe4c711561fcb4c2dec5 402 SUPERFAMILY SSF52374 8 237 5.91E-17 T 12-10-2018 CLSA_c13840 6d8a26fd178ffe4c711561fcb4c2dec5 402 Gene3D G3DSA:3.40.50.620 3 244 2.7E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c13840 6d8a26fd178ffe4c711561fcb4c2dec5 402 Hamap MF_01539 UPF0348 protein . 4 400 36.109 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 CLSA_c23920 7d95262541a33bfddebc4d1e17f03fb5 200 Gene3D G3DSA:1.10.1760.20 3 188 6.9E-38 T 12-10-2018 CLSA_c23920 7d95262541a33bfddebc4d1e17f03fb5 200 Pfam PF07155 ECF-type riboflavin transporter, S component 7 184 6.7E-40 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 SUPERFAMILY SSF63520 301 401 5.62E-16 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 411 489 6.6E-6 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 SUPERFAMILY SSF46894 2 66 4.82E-5 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 SUPERFAMILY SSF52794 409 491 6.8E-10 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Gene3D G3DSA:1.10.1790.10 199 288 5.9E-13 T 12-10-2018 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Pfam PF05043 Mga helix-turn-helix domain 98 172 1.3E-15 T 12-10-2018 IPR007737 Mga helix-turn-helix domain CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Pfam PF00874 PRD domain 211 285 3.6E-12 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Pfam PF00874 PRD domain 311 399 2.1E-15 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Gene3D G3DSA:3.40.930.10 519 663 2.0E-12 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 SUPERFAMILY SSF55804 521 663 7.85E-16 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Gene3D G3DSA:1.10.10.10 1 67 2.8E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Gene3D G3DSA:1.10.10.10 83 198 7.7E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Pfam PF08279 HTH domain 6 63 7.0E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Gene3D G3DSA:1.10.1790.10 302 403 5.6E-12 T 12-10-2018 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Gene3D G3DSA:3.40.50.2300 409 496 1.3E-8 T 12-10-2018 CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 522 662 5.6E-14 T 12-10-2018 IPR002178 PTS EIIA type-2 domain CLSA_c09840 852f3b7d0bbfd84258e147292148b70f 665 SUPERFAMILY SSF63520 202 284 2.22E-13 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 SUPERFAMILY SSF51735 174 403 1.16E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 PIRSF PIRSF000106 58 404 2.0E-78 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 SUPERFAMILY SSF53223 20 172 2.45E-51 T 12-10-2018 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 Pfam PF03949 Malic enzyme, NAD binding domain 176 397 5.7E-25 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 Gene3D G3DSA:3.40.50.720 172 404 8.9E-81 T 12-10-2018 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 Pfam PF00390 Malic enzyme, N-terminal domain 30 162 3.0E-24 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 Gene3D G3DSA:3.40.50.10380 10 171 8.5E-67 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 SMART SM01274 29 162 3.2E-72 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLSA_c34780 e3fe0ab72bdd37e2a5eb391e43835776 404 SMART SM00919 174 397 7.4E-119 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 Gene3D G3DSA:3.20.20.70 158 328 1.3E-203 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 SUPERFAMILY SSF54675 12 145 7.07E-49 T 12-10-2018 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 PIRSF PIRSF000484 8 489 7.1E-165 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 Gene3D G3DSA:3.20.140.10 17 479 1.3E-203 T 12-10-2018 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 SUPERFAMILY SSF51690 146 487 6.48E-128 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 17 475 2.3E-169 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 CLSA_c31100 9c21160e0f903e4db32d75a5dcec8dde 492 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 163 331 2.8E-4 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 Pfam PF00122 E1-E2 ATPase 119 290 5.1E-45 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 70 615 4.1E-128 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 595 9.9E-83 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 SUPERFAMILY SSF56784 309 612 1.7E-52 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 Gene3D G3DSA:2.70.150.20 112 223 2.7E-34 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 448 6.2E-26 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 469 6.2E-26 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 6.2E-26 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 168 182 6.2E-26 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 531 6.2E-26 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 548 6.2E-26 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 Gene3D G3DSA:3.40.50.1000 291 564 1.2E-88 T 12-10-2018 IPR023214 HAD superfamily CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 544 569 5.9E-5 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 512 528 5.9E-5 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 SUPERFAMILY SSF81653 121 218 2.48E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 SUPERFAMILY SSF81665 72 592 2.09E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 525 9.3E-38 T 12-10-2018 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 614 4.6E-169 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c21070 39ecc51ba26808ec87251bc169508701 621 Gene3D G3DSA:3.40.1110.10 321 444 1.2E-88 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 SUPERFAMILY SSF48452 599 726 1.22E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 Gene3D G3DSA:1.10.10.10 753 824 5.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 Pfam PF00196 Bacterial regulatory proteins, luxR family 762 817 1.6E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 SMART SM00421 760 817 2.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 SUPERFAMILY SSF52540 10 206 7.32E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 ProSitePatterns PS00622 LuxR-type HTH domain signature. 777 804 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 SUPERFAMILY SSF46894 757 823 2.04E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 Gene3D G3DSA:1.25.40.10 497 745 5.5E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 777 793 6.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 793 805 6.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c26040 6478c9a03a3b17435f46e4f3d77ea4af 824 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 763 777 6.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c39990 4f3180a716c9a3a68ea82212421b824d 350 Gene3D G3DSA:1.20.1540.10 132 348 3.1E-44 T 12-10-2018 IPR035952 Rhomboid-like superfamily CLSA_c39990 4f3180a716c9a3a68ea82212421b824d 350 Pfam PF01694 Rhomboid family 199 339 1.8E-41 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CLSA_c39990 4f3180a716c9a3a68ea82212421b824d 350 SUPERFAMILY SSF144091 138 341 5.62E-46 T 12-10-2018 CLSA_c20480 f4aa2c5a2db93133f10d6446cd1c8205 286 Gene3D G3DSA:3.30.750.24 157 278 1.5E-34 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c20480 f4aa2c5a2db93133f10d6446cd1c8205 286 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 12 109 5.6E-16 T 12-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain CLSA_c20480 f4aa2c5a2db93133f10d6446cd1c8205 286 SUPERFAMILY SSF52091 157 254 2.55E-17 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c20480 f4aa2c5a2db93133f10d6446cd1c8205 286 Pfam PF01740 STAS domain 164 254 1.2E-7 T 12-10-2018 IPR002645 STAS domain CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 Pfam PF00672 HAMP domain 316 359 2.3E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 SMART SM00283 393 668 1.7E-59 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 621 5.9E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 Gene3D G3DSA:1.20.1480.50 275 367 4.0E-12 T 12-10-2018 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 SUPERFAMILY SSF58104 332 667 7.32E-67 T 12-10-2018 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 Gene3D G3DSA:1.10.287.950 368 668 6.6E-63 T 12-10-2018 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 SMART SM00304 312 364 8.7E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 Pfam PF02743 Cache domain 36 273 4.7E-30 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 SUPERFAMILY SSF103190 124 196 6.08E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c42540 20203c7bf1f452d3e7bd08f0c6aa3349 669 Gene3D G3DSA:3.30.450.20 77 186 7.5E-19 T 12-10-2018 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 Gene3D G3DSA:3.20.20.100 10 292 2.5E-55 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 Pfam PF13534 4Fe-4S dicluster domain 303 370 3.1E-10 T 12-10-2018 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 356 367 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 SUPERFAMILY SSF46548 279 373 2.38E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 Pfam PF00248 Aldo/keto reductase family 24 286 1.4E-36 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 Gene3D G3DSA:1.10.1060.10 293 385 1.7E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 PRINTS PR00069 Aldo-keto reductase signature 50 74 4.3E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 PRINTS PR00069 Aldo-keto reductase signature 143 160 4.3E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 PRINTS PR00069 Aldo-keto reductase signature 107 125 4.3E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c19200 ee3957c116c335878fedf8c79f03f136 401 SUPERFAMILY SSF51430 13 323 1.7E-61 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 Gene3D G3DSA:3.30.450.20 139 270 1.6E-23 T 12-10-2018 CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 Gene3D G3DSA:1.10.287.950 363 663 1.3E-57 T 12-10-2018 CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 SMART SM00283 388 656 2.8E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 Pfam PF02743 Cache domain 36 267 8.4E-19 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 SUPERFAMILY SSF58104 334 663 4.32E-59 T 12-10-2018 CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 Gene3D G3DSA:1.20.1480.50 271 362 6.1E-7 T 12-10-2018 CLSA_c32320 733cda53c18c4d4d3be3684408a66c2b 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 468 601 5.7E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c33210 84af782d14993b6180cb9e9a6128ae49 236 SMART SM00382 26 213 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c33210 84af782d14993b6180cb9e9a6128ae49 236 SUPERFAMILY SSF52540 2 233 1.04E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c33210 84af782d14993b6180cb9e9a6128ae49 236 PIRSF PIRSF039137 1 235 3.0E-112 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CLSA_c33210 84af782d14993b6180cb9e9a6128ae49 236 Gene3D G3DSA:3.40.50.300 1 235 2.3E-64 T 12-10-2018 CLSA_c33210 84af782d14993b6180cb9e9a6128ae49 236 Pfam PF00005 ABC transporter 17 162 1.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c33210 84af782d14993b6180cb9e9a6128ae49 236 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c16310 5bcaf1123febc02a80b591c893106c4a 191 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 135 3.9E-8 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLSA_c16310 5bcaf1123febc02a80b591c893106c4a 191 SUPERFAMILY SSF53335 5 160 6.33E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c16310 5bcaf1123febc02a80b591c893106c4a 191 Gene3D G3DSA:3.40.50.150 2 183 1.3E-17 T 12-10-2018 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 6.0E-24 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 122 24.808 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 SUPERFAMILY SSF48300 2 58 2.75E-14 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 122 3.4E-49 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 Gene3D G3DSA:1.20.5.710 1 52 1.1E-20 T 12-10-2018 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 SUPERFAMILY SSF54736 52 122 6.1E-26 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 Gene3D G3DSA:3.30.1390.10 53 122 2.7E-32 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 49 9.0E-19 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01930 7723ca8cf27ed04eb0f0aa643b5a40d2 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 8.1E-32 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c42410 b22cc2e86efc622cc59514f8df9127fe 247 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 31 232 1.6E-66 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CLSA_c42410 b22cc2e86efc622cc59514f8df9127fe 247 Gene3D G3DSA:3.40.50.300 2 239 4.5E-74 T 12-10-2018 CLSA_c42410 b22cc2e86efc622cc59514f8df9127fe 247 SUPERFAMILY SSF52540 50 229 4.48E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42410 b22cc2e86efc622cc59514f8df9127fe 247 Pfam PF13614 AAA domain 54 178 5.3E-13 T 12-10-2018 IPR025669 AAA domain CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 PRINTS PR00297 10kDa chaperonin signature 25 46 2.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 PRINTS PR00297 10kDa chaperonin signature 80 93 2.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 PRINTS PR00297 10kDa chaperonin signature 59 71 2.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 PRINTS PR00297 10kDa chaperonin signature 3 18 2.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 Gene3D G3DSA:2.30.33.40 1 94 1.3E-37 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 6.1E-35 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 SMART SM00883 2 93 1.2E-50 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 26.812 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 SUPERFAMILY SSF50129 1 94 3.67E-33 T 12-10-2018 IPR011032 GroES-like superfamily CLSA_c03650 976ae92d1c5a819f91b2e96a1c6625da 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CLSA_c32570 744ffebeb3b838c8e52bbad6d71fd3a8 258 Pfam PF02535 ZIP Zinc transporter 106 251 3.2E-24 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 SMART SM00905 4 117 5.9E-43 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 SUPERFAMILY SSF55620 2 119 1.61E-31 T 12-10-2018 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 Gene3D G3DSA:3.30.70.560 119 271 3.1E-59 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 SUPERFAMILY SSF55083 120 269 3.66E-54 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 123 251 1.2E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 TIGRFAM TIGR00526 folB_dom: FolB domain 2 120 5.8E-31 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 122 251 6.4E-45 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 5.1E-36 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 206 217 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 Gene3D G3DSA:3.30.1130.10 1 118 1.4E-35 T 12-10-2018 CLSA_c02610 db23bcf5d54e1295e49c933f40752f3f 271 Pfam PF02152 Dihydroneopterin aldolase 5 115 2.8E-29 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 127 1.6E-45 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 Gene3D G3DSA:1.10.1200.120 1 130 1.6E-43 T 12-10-2018 IPR036019 Gated mechanosensitive channel CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.0E-13 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 82 90 2.0E-13 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 91 100 2.0E-13 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 129 5.1E-45 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 SUPERFAMILY SSF81330 10 123 4.84E-34 T 12-10-2018 IPR036019 Gated mechanosensitive channel CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CLSA_c37820 e95d5b965557e84b4ad51806d381621d 131 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 128 23.783 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Pfam PF12733 Cadherin-like beta sandwich domain 787 867 2.6E-15 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Pfam PF12733 Cadherin-like beta sandwich domain 670 769 1.7E-13 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Gene3D G3DSA:2.10.270.10 983 1024 3.6E-10 T 12-10-2018 CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Gene3D G3DSA:2.10.270.10 824 982 1.5E-16 T 12-10-2018 CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 SUPERFAMILY SSF69360 897 1024 4.81E-28 T 12-10-2018 CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Pfam PF01473 Putative cell wall binding repeat 964 982 0.055 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Pfam PF01473 Putative cell wall binding repeat 921 935 0.036 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41500 f95acba2240cd948bce082eda0b0284b 1025 Pfam PF01473 Putative cell wall binding repeat 985 1002 1.3E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c08600 b7eca042b6b26062bd129df497f1c2fe 291 Gene3D G3DSA:3.40.190.10 136 239 8.7E-52 T 12-10-2018 CLSA_c08600 b7eca042b6b26062bd129df497f1c2fe 291 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 274 2.0E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c08600 b7eca042b6b26062bd129df497f1c2fe 291 SUPERFAMILY SSF53850 7 276 2.33E-54 T 12-10-2018 CLSA_c08600 b7eca042b6b26062bd129df497f1c2fe 291 Gene3D G3DSA:3.40.190.10 49 273 8.7E-52 T 12-10-2018 CLSA_c08600 b7eca042b6b26062bd129df497f1c2fe 291 SMART SM00062 51 277 1.2E-43 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c02260 eb597a3191d5f26d3cc210a25fd17996 72 Gene3D G3DSA:2.40.50.140 1 72 1.0E-36 T 12-10-2018 CLSA_c02260 eb597a3191d5f26d3cc210a25fd17996 72 SUPERFAMILY SSF50249 1 70 1.54E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c02260 eb597a3191d5f26d3cc210a25fd17996 72 SMART SM00316 2 72 9.3E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c02260 eb597a3191d5f26d3cc210a25fd17996 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.073 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CLSA_c02260 eb597a3191d5f26d3cc210a25fd17996 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.0E-28 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CLSA_c02260 eb597a3191d5f26d3cc210a25fd17996 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.9E-37 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 SUPERFAMILY SSF52540 13 255 1.14E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 Gene3D G3DSA:3.40.50.300 6 167 1.8E-7 T 12-10-2018 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 SMART SM00421 790 847 4.4E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 807 823 2.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 793 807 2.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 823 835 2.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 Pfam PF00196 Bacterial regulatory proteins, luxR family 792 845 8.2E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 Gene3D G3DSA:1.10.10.10 790 850 7.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 Gene3D G3DSA:1.25.40.10 454 788 5.2E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 SUPERFAMILY SSF48452 595 706 6.96E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 ProSitePatterns PS00622 LuxR-type HTH domain signature. 807 834 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c25410 0d0921b77fda1675ce27b835654705d9 852 SUPERFAMILY SSF46894 784 846 5.78E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 Gene3D G3DSA:2.30.140.10 1 52 8.5E-22 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 SUPERFAMILY SSF53335 3 280 3.83E-89 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 Gene3D G3DSA:3.40.50.150 53 280 1.3E-78 T 12-10-2018 CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 280 41.079 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 Pfam PF17284 Spermidine synthase tetramerisation domain 3 55 1.4E-14 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 Pfam PF01564 Spermine/spermidine synthase domain 58 238 1.1E-58 T 12-10-2018 CLSA_c07760 e1237331b9c0f8fd2d4e6de4987da99a 281 TIGRFAM TIGR00417 speE: spermidine synthase 4 274 3.4E-98 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLSA_c31400 764db275415ef96623e2f7b93ae98383 358 SUPERFAMILY SSF109604 122 292 3.66E-33 T 12-10-2018 CLSA_c31400 764db275415ef96623e2f7b93ae98383 358 SMART SM00471 126 262 9.6E-11 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c31400 764db275415ef96623e2f7b93ae98383 358 Pfam PF13487 HD domain 182 244 1.5E-14 T 12-10-2018 CLSA_c31400 764db275415ef96623e2f7b93ae98383 358 Gene3D G3DSA:1.10.3210.10 2 294 2.1E-74 T 12-10-2018 CLSA_c31400 764db275415ef96623e2f7b93ae98383 358 TIGRFAM TIGR00277 HDIG: HDIG domain 126 221 1.5E-7 T 12-10-2018 IPR006675 HDIG domain CLSA_c30810 690d90b1a49ca10f3f70e5171dccf551 217 Gene3D G3DSA:1.20.5.620 39 119 3.8E-15 T 12-10-2018 CLSA_c30810 690d90b1a49ca10f3f70e5171dccf551 217 Pfam PF01991 ATP synthase (E/31 kDa) subunit 31 215 3.8E-18 T 12-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30810 690d90b1a49ca10f3f70e5171dccf551 217 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 23 217 11.959 T 12-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30810 690d90b1a49ca10f3f70e5171dccf551 217 SUPERFAMILY SSF160527 103 215 8.63E-14 T 12-10-2018 CLSA_c41330 0f864c0ea2b8ac3a9b63668aaea1f73d 279 SUPERFAMILY SSF53187 75 278 1.38E-39 T 12-10-2018 CLSA_c41330 0f864c0ea2b8ac3a9b63668aaea1f73d 279 SMART SM00646 157 275 3.2E-24 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c41330 0f864c0ea2b8ac3a9b63668aaea1f73d 279 Gene3D G3DSA:3.40.630.40 73 279 2.0E-51 T 12-10-2018 CLSA_c41330 0f864c0ea2b8ac3a9b63668aaea1f73d 279 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 77 275 1.4E-42 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 Gene3D G3DSA:3.40.1190.10 107 311 1.8E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 Gene3D G3DSA:3.40.50.720 12 104 1.3E-14 T 12-10-2018 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 16 456 1.2E-104 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 SUPERFAMILY SSF53244 313 458 5.19E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 Pfam PF08245 Mur ligase middle domain 122 294 1.5E-33 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 SUPERFAMILY SSF53623 110 311 4.19E-41 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 SUPERFAMILY SSF51984 15 105 8.89E-12 T 12-10-2018 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 15 458 30.295 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLSA_c01480 8625effb53bb8fab10b6e6a93db1feb6 458 Gene3D G3DSA:3.90.190.20 319 458 3.5E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Gene3D G3DSA:1.10.8.60 350 485 5.5E-47 T 12-10-2018 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 SMART SM01086 719 808 2.8E-28 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Pfam PF07724 AAA domain (Cdc48 subfamily) 540 712 7.6E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Gene3D G3DSA:3.40.50.300 493 718 2.1E-89 T 12-10-2018 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Gene3D G3DSA:1.10.1780.10 5 152 2.3E-36 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Gene3D G3DSA:4.10.860.10 413 471 5.5E-47 T 12-10-2018 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 719 799 7.5E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 SMART SM00382 204 348 2.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 SMART SM00382 541 681 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 SUPERFAMILY SSF52540 165 477 4.02E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 575 593 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Gene3D G3DSA:1.10.8.60 719 811 7.0E-24 T 12-10-2018 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Gene3D G3DSA:3.40.50.300 155 347 6.2E-72 T 12-10-2018 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 321 1.0E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 299 311 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 590 608 1.1E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 619 637 1.1E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 545 563 1.1E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 666 1.1E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 SUPERFAMILY SSF81923 4 146 1.37E-25 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Pfam PF02151 UvrB/uvrC motif 421 456 3.7E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 3.2E-12 T 12-10-2018 IPR004176 Clp, N-terminal CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.5E-11 T 12-10-2018 IPR004176 Clp, N-terminal CLSA_c01710 6a33293d7632c67d2968652105f40d43 812 SUPERFAMILY SSF52540 490 807 3.63E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13090 14b007c318f4872225675e77e0bfb034 73 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 69 2.0E-8 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CLSA_c13090 14b007c318f4872225675e77e0bfb034 73 SUPERFAMILY SSF47336 2 71 7.33E-17 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c13090 14b007c318f4872225675e77e0bfb034 73 Pfam PF00550 Phosphopantetheine attachment site 4 68 8.9E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c13090 14b007c318f4872225675e77e0bfb034 73 Hamap MF_01217 Acyl carrier protein [acpP]. 1 72 17.051 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CLSA_c13090 14b007c318f4872225675e77e0bfb034 73 Gene3D G3DSA:1.10.1200.10 1 73 3.8E-19 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c24420 182e423d0ccb166ed59e7f996d0b2b1c 258 Pfam PF08241 Methyltransferase domain 47 141 5.0E-15 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CLSA_c24420 182e423d0ccb166ed59e7f996d0b2b1c 258 Gene3D G3DSA:3.40.50.150 2 258 2.6E-36 T 12-10-2018 CLSA_c24420 182e423d0ccb166ed59e7f996d0b2b1c 258 SUPERFAMILY SSF53335 1 204 2.99E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c04400 6b48b9ffea60f120a8b35de3f3f1fc19 195 SUPERFAMILY SSF88946 3 88 6.02E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c04400 6b48b9ffea60f120a8b35de3f3f1fc19 195 Gene3D G3DSA:1.20.120.1810 4 91 1.7E-7 T 12-10-2018 CLSA_c04400 6b48b9ffea60f120a8b35de3f3f1fc19 195 Pfam PF04542 Sigma-70 region 2 25 89 8.5E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c04400 6b48b9ffea60f120a8b35de3f3f1fc19 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 184 1.0E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c21310 db13f623ec8794bec15d7fa2ca46f8af 197 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 16.1 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLSA_c21310 db13f623ec8794bec15d7fa2ca46f8af 197 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 197 9.1E-46 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLSA_c21310 db13f623ec8794bec15d7fa2ca46f8af 197 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 191 1.2E-42 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLSA_c21310 db13f623ec8794bec15d7fa2ca46f8af 197 SMART SM01207 8 192 3.2E-63 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 Gene3D G3DSA:3.30.70.250 128 197 1.7E-84 T 12-10-2018 CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 PIRSF PIRSF000446 3 311 7.5E-81 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 Pfam PF00698 Acyl transferase domain 8 291 3.9E-27 T 12-10-2018 IPR014043 Acyl transferase CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 SUPERFAMILY SSF55048 131 197 1.83E-12 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 SUPERFAMILY SSF52151 6 309 5.49E-64 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 301 3.2E-19 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 291 2.1E-84 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLSA_c13110 d564fcf8a97da0ed435d1a56f45f1df5 312 Gene3D G3DSA:3.40.366.10 7 286 1.7E-84 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 SMART SM00116 363 411 0.0087 T 12-10-2018 IPR000644 CBS domain CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 SMART SM00116 299 352 5.6 T 12-10-2018 IPR000644 CBS domain CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 Gene3D G3DSA:3.10.580.10 288 412 8.4E-32 T 12-10-2018 CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 SUPERFAMILY SSF54631 291 406 2.91E-25 T 12-10-2018 CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 SMART SM00924 189 292 4.3E-35 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 SUPERFAMILY SSF158791 163 288 3.14E-31 T 12-10-2018 CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 Pfam PF03448 MgtE intracellular N domain 189 289 3.8E-28 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 Gene3D G3DSA:1.25.60.10 167 287 2.3E-28 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 Pfam PF05239 PRC-barrel domain 6 79 9.7E-6 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 Pfam PF00571 CBS domain 292 348 1.0E-6 T 12-10-2018 IPR000644 CBS domain CLSA_c44190 d39bb0dfa9e9edd11a417a44b1c4ca6e 418 Pfam PF00571 CBS domain 359 405 2.1E-7 T 12-10-2018 IPR000644 CBS domain CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 PIRSF PIRSF000505 1 431 1.5E-129 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 Gene3D G3DSA:3.65.10.10 20 222 5.5E-58 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 Gene3D G3DSA:3.65.10.10 223 430 1.3E-66 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 427 32.623 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 SUPERFAMILY SSF55205 6 426 1.83E-107 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 420 1.4E-101 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CLSA_c06820 dd8a37f11596e5a306188eba5d7c1aed 435 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 13 425 2.7E-111 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLSA_c12010 801e1a91ee61f2cc1a40afa27a5c8193 251 Pfam PF00005 ABC transporter 23 162 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c12010 801e1a91ee61f2cc1a40afa27a5c8193 251 SUPERFAMILY SSF52540 4 213 5.9E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12010 801e1a91ee61f2cc1a40afa27a5c8193 251 Gene3D G3DSA:3.40.50.300 2 223 4.5E-62 T 12-10-2018 CLSA_c12010 801e1a91ee61f2cc1a40afa27a5c8193 251 SMART SM00382 32 213 1.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c12010 801e1a91ee61f2cc1a40afa27a5c8193 251 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c05670 5c64beed018a230bfae148f67fae8284 169 Gene3D G3DSA:3.40.50.360 24 169 3.3E-11 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c05670 5c64beed018a230bfae148f67fae8284 169 SUPERFAMILY SSF52218 32 95 1.05E-10 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c43130 f61f69333265e0b81e3460a9d4222f9f 119 SUPERFAMILY SSF50118 5 116 1.64E-41 T 12-10-2018 CLSA_c43130 f61f69333265e0b81e3460a9d4222f9f 119 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 113 7.7E-35 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CLSA_c43130 f61f69333265e0b81e3460a9d4222f9f 119 PIRSF PIRSF033490 4 116 1.1E-37 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CLSA_c43130 f61f69333265e0b81e3460a9d4222f9f 119 Gene3D G3DSA:2.30.30.110 1 119 1.4E-51 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLSA_c43200 d6da37822b1315f5769117a592f659b1 115 Hamap MF_00984 Single-stranded DNA-binding protein. 1 107 28.55 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLSA_c43200 d6da37822b1315f5769117a592f659b1 115 Gene3D G3DSA:2.40.50.140 1 112 5.0E-39 T 12-10-2018 CLSA_c43200 d6da37822b1315f5769117a592f659b1 115 Pfam PF00436 Single-strand binding protein family 1 103 3.9E-33 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CLSA_c43200 d6da37822b1315f5769117a592f659b1 115 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 107 8.8E-32 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLSA_c43200 d6da37822b1315f5769117a592f659b1 115 PIRSF PIRSF002070 1 115 4.4E-35 T 12-10-2018 CLSA_c43200 d6da37822b1315f5769117a592f659b1 115 SUPERFAMILY SSF50249 1 108 2.04E-38 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c45300 e6df5d6a965d963146e6e240757d6fa9 647 PIRSF PIRSF026583 2 647 6.3E-194 T 12-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA CLSA_c45300 e6df5d6a965d963146e6e240757d6fa9 647 Pfam PF02272 DHHA1 domain 514 639 5.6E-16 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLSA_c45300 e6df5d6a965d963146e6e240757d6fa9 647 Gene3D G3DSA:3.10.310.30 538 645 8.7E-12 T 12-10-2018 CLSA_c45300 e6df5d6a965d963146e6e240757d6fa9 647 Pfam PF01368 DHH family 337 492 3.4E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c45300 e6df5d6a965d963146e6e240757d6fa9 647 Gene3D G3DSA:3.90.1640.10 320 536 1.3E-56 T 12-10-2018 CLSA_c45300 e6df5d6a965d963146e6e240757d6fa9 647 SUPERFAMILY SSF64182 337 635 1.57E-63 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily CLSA_c21550 4794290e2e75098e9f7e3a8329fec53c 543 Gene3D G3DSA:1.25.40.10 350 537 8.0E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c21550 4794290e2e75098e9f7e3a8329fec53c 543 SUPERFAMILY SSF48452 463 538 1.4E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c21550 4794290e2e75098e9f7e3a8329fec53c 543 SUPERFAMILY SSF53335 63 345 1.25E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c21550 4794290e2e75098e9f7e3a8329fec53c 543 Pfam PF07719 Tetratricopeptide repeat 494 526 2.6E-7 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 CLSA_c21550 4794290e2e75098e9f7e3a8329fec53c 543 SMART SM00028 460 493 290.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c21550 4794290e2e75098e9f7e3a8329fec53c 543 SMART SM00028 494 527 3.9E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 SUPERFAMILY SSF82866 784 1003 1.44E-49 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:3.30.2090.10 176 268 7.1E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37160 94049258dce2656c455280c000417fbd 1027 SUPERFAMILY SSF82714 703 786 1.57E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:3.30.70.1440 651 845 7.1E-260 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 532 549 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:3.30.70.1320 133 326 7.1E-260 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:3.30.70.1430 547 650 7.1E-260 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Pfam PF00873 AcrB/AcrD/AcrF family 4 1002 3.3E-185 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 SUPERFAMILY SSF82693 41 126 9.59E-21 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 SUPERFAMILY SSF82693 137 318 1.08E-15 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:1.20.1640.10 10 500 7.1E-260 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 SUPERFAMILY SSF82714 180 265 3.27E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:3.30.2090.10 702 788 7.1E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37160 94049258dce2656c455280c000417fbd 1027 SUPERFAMILY SSF82866 296 489 7.32E-36 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:1.20.1640.10 501 999 7.1E-260 T 12-10-2018 CLSA_c37160 94049258dce2656c455280c000417fbd 1027 Gene3D G3DSA:3.30.70.1430 40 796 7.1E-260 T 12-10-2018 CLSA_c12410 9e1e98e4450af5d0a36bc462d48e10df 325 Gene3D G3DSA:2.60.120.10 1 218 1.3E-77 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c12410 9e1e98e4450af5d0a36bc462d48e10df 325 Pfam PF01238 Phosphomannose isomerase type I 5 195 1.7E-20 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 CLSA_c12410 9e1e98e4450af5d0a36bc462d48e10df 325 SUPERFAMILY SSF51182 1 310 1.51E-86 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c12410 9e1e98e4450af5d0a36bc462d48e10df 325 Gene3D G3DSA:2.60.120.10 222 309 4.4E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c12410 9e1e98e4450af5d0a36bc462d48e10df 325 PIRSF PIRSF036894 1 309 2.7E-113 T 12-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 CLSA_c35450 c1839812f1c6a5dde848c005bf55d044 228 SMART SM00287 167 228 3.3E-7 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c35450 c1839812f1c6a5dde848c005bf55d044 228 Pfam PF08239 Bacterial SH3 domain 175 225 2.0E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c35450 c1839812f1c6a5dde848c005bf55d044 228 Gene3D G3DSA:2.30.30.40 167 228 4.1E-13 T 12-10-2018 CLSA_c12610 2a6f012b446253e2655b07b4e859950b 348 SUPERFAMILY SSF82171 56 269 1.96E-7 T 12-10-2018 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 SUPERFAMILY SSF50486 203 306 1.35E-31 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 Gene3D G3DSA:3.40.50.170 1 203 1.0E-70 T 12-10-2018 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 Gene3D G3DSA:3.10.25.10 205 306 3.0E-31 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 299 2.1E-96 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 302 34.268 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 4.8E-32 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 SUPERFAMILY SSF53328 1 199 1.57E-59 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 Pfam PF00551 Formyl transferase 1 177 1.6E-34 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c13670 8d6d37a6d767d6d5e6db55ea2e2bd273 308 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c22740 dad25a4cc8c2791ce7a0700901f7c5f3 453 SUPERFAMILY SSF53720 25 408 6.81E-62 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c22740 dad25a4cc8c2791ce7a0700901f7c5f3 453 Gene3D G3DSA:3.40.309.10 231 409 3.1E-121 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c22740 dad25a4cc8c2791ce7a0700901f7c5f3 453 PIRSF PIRSF036410 4 452 9.9E-189 T 12-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CLSA_c22740 dad25a4cc8c2791ce7a0700901f7c5f3 453 Gene3D G3DSA:3.40.605.10 26 230 3.1E-121 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c22740 dad25a4cc8c2791ce7a0700901f7c5f3 453 Pfam PF00171 Aldehyde dehydrogenase family 25 284 1.4E-28 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c34280 3514468d223cd317bed5d3feebf5d277 264 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 262 7.7E-33 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA CLSA_c34280 3514468d223cd317bed5d3feebf5d277 264 Gene3D G3DSA:1.10.10.60 224 264 2.5E-6 T 12-10-2018 CLSA_c34280 3514468d223cd317bed5d3feebf5d277 264 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 211 1.5E-15 T 12-10-2018 CLSA_c34280 3514468d223cd317bed5d3feebf5d277 264 Pfam PF02796 Helix-turn-helix domain of resolvase 234 263 2.2E-7 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 SUPERFAMILY SSF53720 26 428 2.75E-87 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 Pfam PF00815 Histidinol dehydrogenase 24 427 4.2E-178 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 135 161 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 3.6E-91 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 427 43.397 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 Gene3D G3DSA:3.40.50.1980 233 349 2.4E-130 T 12-10-2018 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 PIRSF PIRSF000099 2 430 3.1E-175 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 426 1.5E-171 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CLSA_c31340 82bd3555656d7ed5d28a92f10bbd130e 432 Gene3D G3DSA:3.40.50.1980 33 231 2.4E-130 T 12-10-2018 CLSA_c38310 0072541f69413d96d7641e627f89e91b 491 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 486 2.1E-206 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CLSA_c38310 0072541f69413d96d7641e627f89e91b 491 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site CLSA_c38310 0072541f69413d96d7641e627f89e91b 491 Gene3D G3DSA:1.20.1730.10 21 490 1.5E-96 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily CLSA_c38310 0072541f69413d96d7641e627f89e91b 491 Pfam PF00474 Sodium:solute symporter family 33 432 1.3E-103 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CLSA_c38310 0072541f69413d96d7641e627f89e91b 491 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 432 1.6E-95 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CLSA_c38310 0072541f69413d96d7641e627f89e91b 491 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site CLSA_c06600 c70bcc12eb583457b826fb7c2ed6c3a7 192 Gene3D G3DSA:2.60.60.30 19 187 7.1E-68 T 12-10-2018 CLSA_c06600 c70bcc12eb583457b826fb7c2ed6c3a7 192 Pfam PF02342 TerD domain 1 188 5.1E-81 T 12-10-2018 IPR003325 TerD domain CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 Gene3D G3DSA:3.40.350.10 1 171 4.2E-52 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 SUPERFAMILY SSF53092 1 172 7.06E-36 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 SUPERFAMILY SSF55920 173 413 1.01E-72 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 SMART SM01011 1 135 8.7E-32 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 125 2.4E-26 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 Gene3D G3DSA:3.90.230.10 172 414 2.9E-92 T 12-10-2018 CLSA_c00690 3eb1a0eea6261b0bbb32c4b0bf2bbfe7 414 Pfam PF00557 Metallopeptidase family M24 179 392 1.2E-60 T 12-10-2018 IPR000994 Peptidase M24 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Pfam PF00679 Elongation factor G C-terminus 400 482 3.2E-23 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Gene3D G3DSA:3.40.50.300 6 202 8.4E-66 T 12-10-2018 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 146 5.0E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Gene3D G3DSA:3.30.70.870 310 592 3.0E-130 T 12-10-2018 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 SUPERFAMILY SSF52540 4 211 5.61E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 601 1.6E-294 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Gene3D G3DSA:3.30.70.240 392 484 3.0E-130 T 12-10-2018 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Pfam PF03144 Elongation factor Tu domain 2 223 292 2.9E-11 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 1.7E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Gene3D G3DSA:2.40.50.250 485 601 3.0E-130 T 12-10-2018 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 SUPERFAMILY SSF50447 156 302 9.5E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 PRINTS PR00315 GTP-binding elongation factor signature 127 136 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 PRINTS PR00315 GTP-binding elongation factor signature 75 85 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 PRINTS PR00315 GTP-binding elongation factor signature 55 63 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 SMART SM00838 401 486 0.0014 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 SUPERFAMILY SSF54980 306 390 6.71E-13 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 Gene3D G3DSA:2.40.30.10 204 303 8.5E-35 T 12-10-2018 CLSA_c13330 ef9e28906b4eb3dde67aa12fa9f847b4 608 SUPERFAMILY SSF54980 401 514 1.1E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 484 2.1E-175 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 SUPERFAMILY SSF68912 4 41 1.14E-5 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 Gene3D G3DSA:3.40.50.300 201 485 7.8E-122 T 12-10-2018 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 Pfam PF07497 Rho termination factor, RNA-binding domain 123 195 3.9E-31 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 SUPERFAMILY SSF50249 112 182 1.11E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 228 431 2.8E-19 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 SUPERFAMILY SSF52540 160 439 1.65E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 SMART SM00357 123 188 1.7E-15 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 Pfam PF07498 Rho termination factor, N-terminal domain 5 41 6.2E-11 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 SMART SM00382 238 423 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 Hamap MF_01884 Transcription termination factor Rho [rho]. 122 488 180.947 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CLSA_c04960 85f6e162f1adc3de736c7af68f02370e 488 SMART SM00959 5 47 1.2E-9 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Pfam PF13596 PAS domain 217 312 4.5E-9 T 12-10-2018 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 SUPERFAMILY SSF103190 34 164 1.26E-34 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Pfam PF17203 Single cache domain 3 33 166 6.1E-21 T 12-10-2018 IPR033463 Single cache domain 3 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 372 4.0E-13 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Gene3D G3DSA:3.30.450.20 27 169 6.7E-40 T 12-10-2018 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 SUPERFAMILY SSF55785 214 304 5.06E-8 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 521 9.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Gene3D G3DSA:3.30.565.10 370 520 7.0E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 Gene3D G3DSA:3.30.450.20 197 312 1.8E-21 T 12-10-2018 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 3.6E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 3.6E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 SMART SM00387 417 523 2.2E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 SUPERFAMILY SSF55874 400 521 2.05E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32190 055454cc6ac53cfc2509cafc0d5c6da3 524 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 216 321 8.0E-6 T 12-10-2018 IPR000014 PAS domain CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Gene3D G3DSA:3.50.40.10 199 398 9.8E-82 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SUPERFAMILY SSF46955 406 477 5.58E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Gene3D G3DSA:3.30.56.10 5 182 1.1E-66 T 12-10-2018 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SUPERFAMILY SSF54991 693 791 2.35E-32 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Gene3D G3DSA:3.30.56.10 404 477 5.1E-20 T 12-10-2018 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SUPERFAMILY SSF56037 203 400 6.28E-71 T 12-10-2018 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 3.2E-31 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Pfam PF01588 Putative tRNA binding domain 45 146 2.5E-21 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SUPERFAMILY SSF55681 469 685 6.96E-41 T 12-10-2018 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SUPERFAMILY SSF50249 41 194 4.16E-44 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Pfam PF03483 B3/4 domain 216 386 7.3E-66 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Gene3D G3DSA:3.30.930.10 492 684 1.5E-49 T 12-10-2018 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Gene3D G3DSA:3.30.70.380 699 792 1.3E-33 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Gene3D G3DSA:2.40.50.140 39 155 1.1E-66 T 12-10-2018 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SMART SM00874 405 473 2.0E-21 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 2.4E-265 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Pfam PF03484 tRNA synthetase B5 domain 410 473 1.3E-15 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SMART SM00896 698 791 1.2E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 SMART SM00873 215 388 1.3E-84 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLSA_c27370 2cca02567711d4b0ba1f16f8fb24d47c 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 40.562 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 Gene3D G3DSA:1.10.150.170 111 215 7.3E-109 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 Pfam PF01795 MraW methylase family 2 309 8.4E-130 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 SUPERFAMILY SSF81799 113 214 1.7E-37 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 SUPERFAMILY SSF53335 5 310 4.27E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 PIRSF PIRSF004486 1 310 4.4E-117 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 309 5.9E-126 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 310 39.918 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CLSA_c27350 6a75da0032389feea79c20b49fd04e4c 310 Gene3D G3DSA:3.40.50.150 8 309 7.3E-109 T 12-10-2018 CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 SUPERFAMILY SSF46785 1 85 2.45E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 Gene3D G3DSA:3.40.190.290 91 295 2.3E-48 T 12-10-2018 CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 Gene3D G3DSA:1.10.10.10 1 84 4.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 Pfam PF03466 LysR substrate binding domain 89 290 2.8E-36 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c06980 1174c0ddd55b17a0a168ba613c53a6bd 298 SUPERFAMILY SSF53850 86 291 8.54E-36 T 12-10-2018 CLSA_c25280 6d3dc8e0d491038c5d3a9efe97535827 297 Pfam PF02666 Phosphatidylserine decarboxylase 86 292 2.4E-57 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CLSA_c25280 6d3dc8e0d491038c5d3a9efe97535827 297 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 1 294 43.07 T 12-10-2018 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CLSA_c25280 6d3dc8e0d491038c5d3a9efe97535827 297 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 74 293 1.4E-42 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 Pfam PF01595 Domain of unknown function DUF21 12 188 8.3E-55 T 12-10-2018 IPR002550 CNNM, transmembrane domain CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 Pfam PF03471 Transporter associated domain 339 412 5.0E-19 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 Gene3D G3DSA:3.30.465.10 332 418 6.2E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 SUPERFAMILY SSF56176 337 415 1.17E-18 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 Pfam PF00571 CBS domain 204 258 5.3E-5 T 12-10-2018 IPR000644 CBS domain CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 Pfam PF00571 CBS domain 278 323 7.2E-6 T 12-10-2018 IPR000644 CBS domain CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 SUPERFAMILY SSF54631 199 341 1.21E-30 T 12-10-2018 CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 SMART SM01091 338 416 2.3E-19 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c44250 07e1e6537d8de98dd2124a503fd10270 420 Gene3D G3DSA:3.10.580.10 184 331 2.6E-53 T 12-10-2018 CLSA_c29810 554601f6edcee6cecf836bcbe159c8b4 574 Gene3D G3DSA:3.90.1720.10 316 456 5.8E-49 T 12-10-2018 CLSA_c29810 554601f6edcee6cecf836bcbe159c8b4 574 Pfam PF00877 NlpC/P60 family 360 455 4.6E-27 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CLSA_c29810 554601f6edcee6cecf836bcbe159c8b4 574 SUPERFAMILY SSF54001 344 454 3.92E-41 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c05350 22eb41e717f0b247b4ef1bf411c18f7b 218 Gene3D G3DSA:3.40.50.2020 79 217 6.1E-17 T 12-10-2018 CLSA_c05350 22eb41e717f0b247b4ef1bf411c18f7b 218 Pfam PF00156 Phosphoribosyl transferase domain 125 213 2.1E-6 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c05350 22eb41e717f0b247b4ef1bf411c18f7b 218 SUPERFAMILY SSF53271 57 213 2.02E-20 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c18580 89c8ba25ec0fab814680367e8028577e 135 Pfam PF00293 NUDIX domain 6 112 2.1E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c18580 89c8ba25ec0fab814680367e8028577e 135 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.2E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CLSA_c18580 89c8ba25ec0fab814680367e8028577e 135 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.2E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CLSA_c18580 89c8ba25ec0fab814680367e8028577e 135 Gene3D G3DSA:3.90.79.10 1 133 1.5E-39 T 12-10-2018 CLSA_c18580 89c8ba25ec0fab814680367e8028577e 135 SUPERFAMILY SSF55811 1 125 9.88E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c33220 022c4baa8c5edb9af008eeb4a4ad7772 256 Gene3D G3DSA:3.40.50.300 1 253 5.6E-61 T 12-10-2018 CLSA_c33220 022c4baa8c5edb9af008eeb4a4ad7772 256 Pfam PF00005 ABC transporter 20 179 2.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c33220 022c4baa8c5edb9af008eeb4a4ad7772 256 SMART SM00382 28 230 1.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c33220 022c4baa8c5edb9af008eeb4a4ad7772 256 SUPERFAMILY SSF52540 3 251 1.28E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c33220 022c4baa8c5edb9af008eeb4a4ad7772 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 251 6.1E-10 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 164 1.1E-45 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 Gene3D G3DSA:2.40.50.100 86 163 7.7E-30 T 12-10-2018 CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 Pfam PF00364 Biotin-requiring enzyme 90 163 3.2E-24 T 12-10-2018 IPR000089 Biotin/lipoyl attachment CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 SUPERFAMILY SSF51230 87 163 1.3E-24 T 12-10-2018 IPR011053 Single hybrid motif CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 93 106 3.4E-18 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 124 3.4E-18 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c13140 a71a74be1b4cdbccdf6ecc03fe8209ef 166 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 125 138 3.4E-18 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLSA_c03310 babf9eea7a24503f8b012e61427ced52 297 Pfam PF01522 Polysaccharide deacetylase 134 255 3.7E-34 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c03310 babf9eea7a24503f8b012e61427ced52 297 SUPERFAMILY SSF88713 96 278 1.39E-45 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c03310 babf9eea7a24503f8b012e61427ced52 297 Gene3D G3DSA:3.20.20.370 70 293 3.8E-77 T 12-10-2018 CLSA_c41480 429ec2a93fc8c945cb0b925205a6fb76 232 PIRSF PIRSF037382 1 232 4.0E-82 T 12-10-2018 IPR017189 CTP:phosphocholine cytidylyltransferase CLSA_c41480 429ec2a93fc8c945cb0b925205a6fb76 232 SUPERFAMILY SSF53448 1 227 1.9E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41480 429ec2a93fc8c945cb0b925205a6fb76 232 Gene3D G3DSA:3.90.550.10 1 230 6.6E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41480 429ec2a93fc8c945cb0b925205a6fb76 232 Pfam PF00483 Nucleotidyl transferase 3 71 1.9E-10 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF12733 Cadherin-like beta sandwich domain 43 135 1.1E-15 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF12733 Cadherin-like beta sandwich domain 142 230 8.9E-11 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Gene3D G3DSA:2.10.270.10 308 363 1.7E-20 T 12-10-2018 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 SUPERFAMILY SSF69360 348 472 9.61E-40 T 12-10-2018 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Gene3D G3DSA:2.10.270.10 409 472 8.3E-14 T 12-10-2018 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Gene3D G3DSA:2.10.270.10 239 307 1.1E-11 T 12-10-2018 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 SUPERFAMILY SSF69360 249 369 1.06E-31 T 12-10-2018 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Gene3D G3DSA:2.10.270.10 364 408 4.1E-13 T 12-10-2018 CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 415 432 0.085 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 314 331 1.1E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 373 391 9.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 393 411 0.064 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 434 452 0.013 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 353 371 0.024 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41930 ef4bc690ee886a596efd710d59c26a9f 477 Pfam PF01473 Putative cell wall binding repeat 333 351 1.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c10980 051ff5af0ce600bdab5f01902edac4b2 166 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 132 142 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site CLSA_c10980 051ff5af0ce600bdab5f01902edac4b2 166 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 10 166 23.023 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLSA_c10980 051ff5af0ce600bdab5f01902edac4b2 166 SUPERFAMILY SSF55486 2 165 5.62E-42 T 12-10-2018 CLSA_c10980 051ff5af0ce600bdab5f01902edac4b2 166 Gene3D G3DSA:3.40.390.30 2 165 2.9E-41 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 CLSA_c10980 051ff5af0ce600bdab5f01902edac4b2 166 Pfam PF02130 Uncharacterized protein family UPF0054 18 162 8.5E-44 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLSA_c10980 051ff5af0ce600bdab5f01902edac4b2 166 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 162 1.9E-36 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLSA_c03190 b507f0b628cbb7bdcae0292db01061eb 255 Gene3D G3DSA:1.20.1080.10 1 255 2.8E-66 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CLSA_c03190 b507f0b628cbb7bdcae0292db01061eb 255 Pfam PF01226 Formate/nitrite transporter 10 246 2.4E-59 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 Gene3D G3DSA:2.60.120.200 26 115 3.7E-19 T 12-10-2018 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 Gene3D G3DSA:2.60.120.200 116 246 1.8E-45 T 12-10-2018 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 113 129 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 150 163 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 94 112 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 134 149 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 168 185 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 232 244 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 208 230 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 PRINTS PR00737 Glycosyl hydrolase family 16 signature 188 205 9.9E-70 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 SUPERFAMILY SSF49899 28 242 3.27E-56 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 137 147 - T 12-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 CLSA_c17380 91ac53028a2bcae27e1e63f563257913 246 Pfam PF00722 Glycosyl hydrolases family 16 57 240 1.0E-45 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 CLSA_c15900 0fd2326d38f775b47bc5c2823eda93bf 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 302 3.6E-55 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c22190 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF13276 HTH-like domain 59 114 1.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c22190 5839407e6c40d6b3ab7bfce70e9f526b 306 Gene3D G3DSA:3.30.420.10 144 298 4.7E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c22190 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF00665 Integrase core domain 145 259 7.6E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c22190 5839407e6c40d6b3ab7bfce70e9f526b 306 SUPERFAMILY SSF53098 137 298 3.64E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c22830 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF13276 HTH-like domain 59 114 1.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c22830 5839407e6c40d6b3ab7bfce70e9f526b 306 Gene3D G3DSA:3.30.420.10 144 298 4.7E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c22830 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF00665 Integrase core domain 145 259 7.6E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c22830 5839407e6c40d6b3ab7bfce70e9f526b 306 SUPERFAMILY SSF53098 137 298 3.64E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c21520 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF13276 HTH-like domain 59 114 1.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c21520 5839407e6c40d6b3ab7bfce70e9f526b 306 Gene3D G3DSA:3.30.420.10 144 298 4.7E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c21520 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF00665 Integrase core domain 145 259 7.6E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c21520 5839407e6c40d6b3ab7bfce70e9f526b 306 SUPERFAMILY SSF53098 137 298 3.64E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c09460 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF13276 HTH-like domain 59 114 1.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c09460 5839407e6c40d6b3ab7bfce70e9f526b 306 Gene3D G3DSA:3.30.420.10 144 298 4.7E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c09460 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF00665 Integrase core domain 145 259 7.6E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c09460 5839407e6c40d6b3ab7bfce70e9f526b 306 SUPERFAMILY SSF53098 137 298 3.64E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c02910 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF13276 HTH-like domain 59 114 1.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c02910 5839407e6c40d6b3ab7bfce70e9f526b 306 Gene3D G3DSA:3.30.420.10 144 298 4.7E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c02910 5839407e6c40d6b3ab7bfce70e9f526b 306 Pfam PF00665 Integrase core domain 145 259 7.6E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c02910 5839407e6c40d6b3ab7bfce70e9f526b 306 SUPERFAMILY SSF53098 137 298 3.64E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 SUPERFAMILY SSF46785 14 94 4.63E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 Hamap MF_01804 Segregation and condensation protein B [scpB]. 18 196 31.846 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 Gene3D G3DSA:1.10.10.10 14 96 2.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 PIRSF PIRSF019345 10 204 2.4E-57 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 SUPERFAMILY SSF46785 98 172 1.43E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 20 195 4.2E-49 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 Gene3D G3DSA:1.10.10.10 97 193 4.9E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26340 362ebcb3be59219cb4f5a78ba177c843 204 Pfam PF04079 Segregation and condensation complex subunit ScpB 23 181 4.2E-59 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLSA_c42850 efc5a71dfb63b63c6ea0ad96319762b5 258 Pfam PF00795 Carbon-nitrogen hydrolase 4 240 2.1E-36 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CLSA_c42850 efc5a71dfb63b63c6ea0ad96319762b5 258 SUPERFAMILY SSF56317 1 249 5.23E-62 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CLSA_c42850 efc5a71dfb63b63c6ea0ad96319762b5 258 Gene3D G3DSA:3.60.110.10 1 255 1.0E-69 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 Pfam PF08239 Bacterial SH3 domain 56 103 5.1E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 SUPERFAMILY SSF55797 152 274 3.84E-25 T 12-10-2018 IPR035940 CAP superfamily CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 SMART SM00287 46 108 5.5E-5 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 152 275 1.3E-54 T 12-10-2018 IPR014258 CAP domain, YkwD-like CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 Gene3D G3DSA:3.40.33.10 145 278 2.4E-44 T 12-10-2018 IPR035940 CAP superfamily CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 Pfam PF00188 Cysteine-rich secretory protein family 159 273 5.4E-20 T 12-10-2018 IPR014044 CAP domain CLSA_c37220 33e5ce81498a8781ac69d605fd5a1182 279 Gene3D G3DSA:2.30.30.40 44 108 5.2E-14 T 12-10-2018 CLSA_c14440 b35c0526635bb4b9974966b270b81f8a 309 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 190 244 8.6E-11 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CLSA_c14440 b35c0526635bb4b9974966b270b81f8a 309 SUPERFAMILY SSF55120 19 244 1.18E-75 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c14440 b35c0526635bb4b9974966b270b81f8a 309 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 19 228 5.8E-74 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c14440 b35c0526635bb4b9974966b270b81f8a 309 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 19 308 17.532 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c14440 b35c0526635bb4b9974966b270b81f8a 309 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 43 189 3.5E-57 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CLSA_c14440 b35c0526635bb4b9974966b270b81f8a 309 Gene3D G3DSA:3.30.2350.10 9 250 1.0E-87 T 12-10-2018 CLSA_c07110 691c2a6ab50a368cba7852a5cc946c84 69 Pfam PF01381 Helix-turn-helix 11 64 9.0E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c07110 691c2a6ab50a368cba7852a5cc946c84 69 SMART SM00530 10 65 1.1E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c07110 691c2a6ab50a368cba7852a5cc946c84 69 SUPERFAMILY SSF47413 5 68 3.49E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c07110 691c2a6ab50a368cba7852a5cc946c84 69 Gene3D G3DSA:1.10.260.40 6 69 1.2E-22 T 12-10-2018 CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 SUPERFAMILY SSF53474 18 328 1.16E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 26 562 1.5E-73 T 12-10-2018 IPR005674 CocE/Serine esterase GO:0016787 CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 29 289 5.5E-43 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 SUPERFAMILY SSF49785 334 562 1.83E-38 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 Gene3D G3DSA:2.60.120.260 343 536 1.2E-51 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 Gene3D G3DSA:1.10.3020.20 179 240 1.4E-98 T 12-10-2018 CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 315 557 2.5E-41 T 12-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 SMART SM00939 302 558 5.4E-40 T 12-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 CLSA_c11900 2b7cb5c92180fe45e42ce81b83f8271a 564 Gene3D G3DSA:3.40.50.1820 28 325 1.4E-98 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 SUPERFAMILY SSF52317 242 439 1.71E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 Gene3D G3DSA:3.40.50.880 244 439 1.4E-5 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 Gene3D G3DSA:3.40.50.300 45 185 1.3E-13 T 12-10-2018 CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 245 428 6.5E-33 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 183 2.7E-13 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 4 438 1.9E-122 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 SUPERFAMILY SSF52540 1 191 6.16E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32510 6e2095936f4283fb26da2c8e1b4429c4 441 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 1 431 36.601 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CLSA_c17920 15bb1644135803e6bf7ef66c45041dd4 382 Gene3D G3DSA:3.30.420.40 188 357 8.4E-53 T 12-10-2018 CLSA_c17920 15bb1644135803e6bf7ef66c45041dd4 382 Gene3D G3DSA:1.10.10.10 11 76 6.3E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17920 15bb1644135803e6bf7ef66c45041dd4 382 SUPERFAMILY SSF53067 81 377 9.98E-39 T 12-10-2018 CLSA_c17920 15bb1644135803e6bf7ef66c45041dd4 382 Pfam PF00480 ROK family 83 373 9.4E-33 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c17920 15bb1644135803e6bf7ef66c45041dd4 382 SUPERFAMILY SSF46785 16 73 7.56E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17920 15bb1644135803e6bf7ef66c45041dd4 382 Gene3D G3DSA:3.30.420.40 87 367 8.4E-53 T 12-10-2018 CLSA_c06890 d7e90e2d25703811eed0bdd06f446296 277 SUPERFAMILY SSF48179 172 276 7.25E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c06890 d7e90e2d25703811eed0bdd06f446296 277 SUPERFAMILY SSF51735 2 166 2.27E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c06890 d7e90e2d25703811eed0bdd06f446296 277 Gene3D G3DSA:1.10.3660.10 176 277 6.6E-29 T 12-10-2018 CLSA_c06890 d7e90e2d25703811eed0bdd06f446296 277 Gene3D G3DSA:3.40.50.720 1 175 3.3E-44 T 12-10-2018 CLSA_c06890 d7e90e2d25703811eed0bdd06f446296 277 Pfam PF02153 Prephenate dehydrogenase 17 267 1.2E-58 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CLSA_c10660 3cf44d509a70bcbf79cc3317cdd2ab70 111 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 4 108 2.8E-38 T 12-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 CLSA_c10660 3cf44d509a70bcbf79cc3317cdd2ab70 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 106 7.8E-28 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CLSA_c10660 3cf44d509a70bcbf79cc3317cdd2ab70 111 Pfam PF01740 STAS domain 2 107 1.4E-21 T 12-10-2018 IPR002645 STAS domain CLSA_c10660 3cf44d509a70bcbf79cc3317cdd2ab70 111 Gene3D G3DSA:3.30.750.24 5 111 8.1E-29 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c10660 3cf44d509a70bcbf79cc3317cdd2ab70 111 SUPERFAMILY SSF52091 1 109 7.46E-28 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 6 364 41.996 T 12-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 154 172 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 36 49 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 192 209 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 109 125 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 228 240 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 136 153 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 279 301 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 1.2E-71 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 Gene3D G3DSA:3.40.50.450 8 340 2.2E-109 T 12-10-2018 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 ProSitePatterns PS00433 Phosphofructokinase signature. 283 301 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 TIGRFAM TIGR02483 PFK_mixed: phosphofructokinase 7 339 4.1E-139 T 12-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 Pfam PF00365 Phosphofructokinase 7 315 4.7E-101 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 Gene3D G3DSA:3.40.50.460 156 295 2.2E-109 T 12-10-2018 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 PIRSF PIRSF000532 4 365 1.2E-128 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLSA_c12430 07797c6155fdcffe082069dfdd4f33f7 365 SUPERFAMILY SSF53784 3 352 7.98E-114 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SUPERFAMILY SSF49373 280 356 1.65E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 204 270 1.1E-12 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SUPERFAMILY SSF69360 30 167 5.59E-41 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SUPERFAMILY SSF49373 693 762 1.96E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:3.10.20.660 202 276 2.9E-10 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF02368 Bacterial Ig-like domain (group 2) 692 754 5.6E-7 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF02368 Bacterial Ig-like domain (group 2) 281 351 6.4E-12 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF02368 Bacterial Ig-like domain (group 2) 586 655 5.8E-5 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:2.60.40.1080 766 867 6.5E-5 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:2.60.40.1080 667 764 6.2E-8 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:2.60.40.1080 278 363 9.5E-14 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:2.60.40.1080 568 663 2.6E-7 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:2.60.40.1080 365 460 5.9E-9 T 12-10-2018 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SMART SM00635 367 455 0.12 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SMART SM00635 676 759 3.8E-4 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SMART SM00635 766 862 9.8 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SMART SM00635 280 357 2.5E-10 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SMART SM00635 869 954 4.4 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SMART SM00635 571 658 0.014 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 SUPERFAMILY SSF49373 366 457 3.45E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF01473 Putative cell wall binding repeat 69 86 6.0E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF01473 Putative cell wall binding repeat 49 67 4.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Pfam PF01473 Putative cell wall binding repeat 90 107 4.8E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41870 517a8eeb47f4541deb00c722a892a619 964 Gene3D G3DSA:2.10.270.10 10 166 4.4E-38 T 12-10-2018 CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 SMART SM00228 90 165 2.2E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 SUPERFAMILY SSF50156 79 172 4.6E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 6 394 7.5E-144 T 12-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 SUPERFAMILY SSF50494 283 388 6.5E-6 T 12-10-2018 IPR009003 Peptidase S1, PA clan CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 88 154 2.0E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 Gene3D G3DSA:2.30.42.10 111 190 2.7E-13 T 12-10-2018 CLSA_c26790 6705fcb06de71316749ba6e6fec3d730 396 Pfam PF05580 SpoIVB peptidase S55 181 389 2.2E-86 T 12-10-2018 IPR008763 Peptidase S55, SpoIVB CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Gene3D G3DSA:3.40.930.10 850 987 8.7E-22 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 SMART SM00382 176 326 8.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 853 987 1.5E-24 T 12-10-2018 IPR002178 PTS EIIA type-2 domain CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Gene3D G3DSA:1.10.10.60 2 51 9.6E-7 T 12-10-2018 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 SUPERFAMILY SSF63520 510 606 3.27E-20 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 SUPERFAMILY SSF55804 850 987 1.29E-25 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 SUPERFAMILY SSF52540 153 388 3.74E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Pfam PF00158 Sigma-54 interaction domain 153 318 8.0E-47 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Gene3D G3DSA:1.10.1790.10 513 609 2.2E-20 T 12-10-2018 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Pfam PF00874 PRD domain 524 606 7.7E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Gene3D G3DSA:3.40.50.300 139 329 4.0E-42 T 12-10-2018 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Gene3D G3DSA:3.40.50.510 615 741 2.6E-35 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 Pfam PF03610 PTS system fructose IIA component 620 728 4.0E-11 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c18040 cc57f34db4414ff75090e04760d0c60f 988 SUPERFAMILY SSF53062 618 730 1.57E-17 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 SMART SM00530 11 66 1.9E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 Gene3D G3DSA:2.60.120.10 91 184 1.7E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 Gene3D G3DSA:1.10.260.40 2 79 1.2E-20 T 12-10-2018 CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 Pfam PF01381 Helix-turn-helix 12 65 2.8E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 SUPERFAMILY SSF51182 59 180 3.69E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 Pfam PF07883 Cupin domain 121 176 2.8E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel CLSA_c33450 31ce8978afaec5833112e120f2ab1155 184 SUPERFAMILY SSF47413 3 73 1.58E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 207 395 1.1E-80 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 SUPERFAMILY SSF55821 2 201 2.17E-82 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 2 393 50.848 T 12-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 196 7.3E-85 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 PIRSF PIRSF001259 1 397 1.6E-161 T 12-10-2018 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Gene3D G3DSA:3.40.50.10990 206 374 8.8E-75 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 SUPERFAMILY SSF142695 204 374 9.81E-65 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Pfam PF00925 GTP cyclohydrolase II 208 371 3.7E-70 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 37.827 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 397 43.186 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 Gene3D G3DSA:3.90.870.10 1 205 1.4E-86 T 12-10-2018 CLSA_c14640 976a12fa76491ff7ef1c3daae66e3560 397 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 197 2.0E-79 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c32690 d32e89001a735c09ae4d93343b4bc397 304 Pfam PF01497 Periplasmic binding protein 48 275 9.0E-40 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain CLSA_c32690 d32e89001a735c09ae4d93343b4bc397 304 SUPERFAMILY SSF53807 32 302 1.41E-58 T 12-10-2018 CLSA_c32690 d32e89001a735c09ae4d93343b4bc397 304 Gene3D G3DSA:3.40.50.1980 168 299 1.4E-36 T 12-10-2018 CLSA_c32690 d32e89001a735c09ae4d93343b4bc397 304 Gene3D G3DSA:3.40.50.1980 44 167 4.4E-28 T 12-10-2018 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 SUPERFAMILY SSF55729 34 119 1.65E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 Pfam PF13673 Acetyltransferase (GNAT) domain 23 116 3.7E-6 T 12-10-2018 IPR000182 GNAT domain CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 12 330 2.1E-105 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 156 205 6.7E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 Gene3D G3DSA:3.40.50.620 155 341 5.8E-23 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 SUPERFAMILY SSF52374 154 330 1.31E-27 T 12-10-2018 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 Gene3D G3DSA:3.40.630.30 4 129 1.8E-9 T 12-10-2018 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 Pfam PF08218 Citrate lyase ligase C-terminal domain 148 329 1.1E-76 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 PIRSF PIRSF005751 1 341 4.5E-126 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 123 329 6.0E-55 T 12-10-2018 CLSA_c34880 4af486940394ce906dd4e929b53e0971 341 SMART SM00764 148 329 5.2E-108 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 Pfam PF12229 Putative peptidoglycan binding domain 80 191 2.0E-18 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 Pfam PF12229 Putative peptidoglycan binding domain 204 320 2.0E-23 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 SUPERFAMILY SSF141523 337 458 1.83E-31 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 Gene3D G3DSA:2.40.440.10 339 459 1.1E-39 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 Gene3D G3DSA:1.10.269.20 213 335 4.2E-40 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 SUPERFAMILY SSF143985 213 333 1.31E-40 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c14900 c2cf219ab3e7d9794079675d61b301b7 461 Pfam PF03734 L,D-transpeptidase catalytic domain 340 457 3.4E-20 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 Gene3D G3DSA:3.30.160.40 217 291 1.6E-11 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 Gene3D G3DSA:3.40.190.10 100 199 2.1E-73 T 12-10-2018 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 222 289 7.6E-14 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 SUPERFAMILY SSF53850 2 207 3.69E-72 T 12-10-2018 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 289 8.2E-97 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 206 3.8E-70 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 227 243 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 SUPERFAMILY SSF54782 218 289 1.57E-14 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 2.7E-36 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 2.7E-36 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 2.7E-36 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 2.7E-36 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 PRINTS PR00151 Porphobilinogen deaminase signature 226 243 2.7E-36 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 PIRSF PIRSF001438 1 291 3.9E-102 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 291 34.462 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLSA_c31680 6a9bfd6645757ed5b17d712c435226aa 293 Gene3D G3DSA:3.40.190.10 5 205 2.1E-73 T 12-10-2018 CLSA_c14960 a3490b6f6334fe2700626337c1868824 300 SMART SM00471 146 280 2.1E-8 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c14960 a3490b6f6334fe2700626337c1868824 300 SUPERFAMILY SSF109604 140 270 1.97E-18 T 12-10-2018 CLSA_c14960 a3490b6f6334fe2700626337c1868824 300 Pfam PF01966 HD domain 151 270 1.6E-11 T 12-10-2018 IPR006674 HD domain CLSA_c14960 a3490b6f6334fe2700626337c1868824 300 TIGRFAM TIGR00277 HDIG: HDIG domain 149 218 1.9E-7 T 12-10-2018 IPR006675 HDIG domain CLSA_c14960 a3490b6f6334fe2700626337c1868824 300 Gene3D G3DSA:1.10.3210.10 48 288 1.3E-15 T 12-10-2018 CLSA_c35420 de62f6f45be914112d937173f2d1b975 145 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 50 130 7.0E-14 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 CLSA_c35420 de62f6f45be914112d937173f2d1b975 145 Pfam PF10934 Protein of unknown function (DUF2634) 27 128 3.3E-29 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 CLSA_c11470 569981cdedac5a32235227e5c1ca17c6 271 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 29 112 3.2E-35 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal CLSA_c11470 569981cdedac5a32235227e5c1ca17c6 271 Pfam PF01478 Type IV leader peptidase family 123 228 2.7E-14 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CLSA_c03210 9bb50070456c51fbc3cb3cfd74574cd9 193 SUPERFAMILY SSF100950 6 193 1.67E-51 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c03210 9bb50070456c51fbc3cb3cfd74574cd9 193 PIRSF PIRSF006806 2 192 4.2E-50 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLSA_c03210 9bb50070456c51fbc3cb3cfd74574cd9 193 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 3.7E-47 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLSA_c03210 9bb50070456c51fbc3cb3cfd74574cd9 193 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 189 2.4E-53 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLSA_c03210 9bb50070456c51fbc3cb3cfd74574cd9 193 Gene3D G3DSA:3.40.50.10420 1 193 6.2E-62 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 SUPERFAMILY SSF55174 15 101 5.38E-12 T 12-10-2018 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 SUPERFAMILY SSF55120 74 301 1.19E-79 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 Pfam PF01479 S4 domain 16 61 2.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 Gene3D G3DSA:3.30.2350.10 81 304 6.9E-77 T 12-10-2018 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 Gene3D G3DSA:3.10.290.10 3 69 1.2E-18 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 301 5.9E-99 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 Pfam PF00849 RNA pseudouridylate synthase 88 242 4.3E-36 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c27190 7384c529bb308f25eeaddc92075111c3 305 SMART SM00363 15 79 1.9E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Gene3D G3DSA:2.70.98.40 2301 2609 2.1E-93 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Gene3D G3DSA:2.70.98.40 1682 1978 2.7E-77 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Gene3D G3DSA:1.50.10.140 993 1162 1.1E-13 T 12-10-2018 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Gene3D G3DSA:1.50.10.140 1285 1515 4.6E-8 T 12-10-2018 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Pfam PF10091 Putative glucoamylase 1334 1506 5.4E-13 T 12-10-2018 IPR019282 Domain of unknown function DUF2329 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 SUPERFAMILY SSF74650 2300 2574 1.73E-69 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 SUPERFAMILY SSF48208 2583 3125 6.8E-93 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 SUPERFAMILY SSF74650 1679 1947 1.16E-65 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 SMART SM01068 1674 1734 3.1E-7 T 12-10-2018 IPR009342 Putative carbohydrate binding domain CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 SMART SM01068 2300 2365 2.0E-31 T 12-10-2018 IPR009342 Putative carbohydrate binding domain CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Pfam PF06165 Glycosyltransferase family 36 2323 2574 2.1E-86 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Pfam PF06165 Glycosyltransferase family 36 1697 1945 7.2E-73 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2604 2889 6.3E-86 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain CLSA_c42550 0db5a18a23a73d1690c718fc2d54f08f 3138 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2922 3062 2.4E-45 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Gene3D G3DSA:2.40.50.140 286 384 4.3E-15 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Pfam PF00575 S1 RNA binding domain 395 443 1.9E-4 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Pfam PF00575 S1 RNA binding domain 297 370 4.9E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Pfam PF00575 S1 RNA binding domain 560 631 4.5E-24 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Pfam PF00575 S1 RNA binding domain 475 545 7.2E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Gene3D G3DSA:2.40.50.140 472 552 4.0E-27 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Gene3D G3DSA:2.40.50.140 553 633 2.2E-30 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Gene3D G3DSA:3.40.50.11270 13 99 5.1E-94 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SUPERFAMILY SSF50249 540 632 3.76E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 614 632 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 575 594 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 368 387 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 440 460 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 410 427 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 497 518 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 PRINTS PR00681 Ribosomal protein S1 signature 300 318 2.4E-33 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Gene3D G3DSA:3.40.1010.20 100 189 5.1E-94 T 12-10-2018 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 2 280 32.63 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SUPERFAMILY SSF50249 387 459 2.42E-7 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Pfam PF02401 LytB protein 4 276 4.6E-90 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SUPERFAMILY SSF50249 295 393 1.17E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4 277 7.5E-96 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SMART SM00316 387 456 0.01 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SMART SM00316 560 631 3.8E-30 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SMART SM00316 475 545 3.9E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SMART SM00316 298 371 4.9E-12 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 SUPERFAMILY SSF50249 475 561 1.58E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c22330 c6c8aafc343848788fff8ac2352fa68f 633 Gene3D G3DSA:3.40.1010.20 4 276 5.1E-94 T 12-10-2018 CLSA_c31500 d3478f9256240a0965112dd7468c0da2 145 Gene3D G3DSA:3.30.70.260 67 143 1.3E-6 T 12-10-2018 CLSA_c31500 d3478f9256240a0965112dd7468c0da2 145 PIRSF PIRSF025624 1 145 7.5E-50 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein CLSA_c31500 d3478f9256240a0965112dd7468c0da2 145 Hamap MF_00707 UPF0735 ACT domain-containing protein . 1 145 29.996 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein CLSA_c31500 d3478f9256240a0965112dd7468c0da2 145 Pfam PF13291 ACT domain 67 140 1.6E-7 T 12-10-2018 IPR002912 ACT domain CLSA_c31500 d3478f9256240a0965112dd7468c0da2 145 SUPERFAMILY SSF55021 69 141 9.92E-9 T 12-10-2018 CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 Gene3D G3DSA:2.60.40.10 2 103 3.5E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 SUPERFAMILY SSF51445 89 529 1.16E-83 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 Gene3D G3DSA:3.20.20.80 126 524 1.6E-113 T 12-10-2018 CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 SUPERFAMILY SSF51011 531 606 1.03E-6 T 12-10-2018 CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 Pfam PF00128 Alpha amylase, catalytic domain 188 495 3.3E-52 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 SMART SM00642 138 522 8.1E-55 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 Gene3D G3DSA:2.60.40.1180 532 592 2.9E-5 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c43790 cb8beb58d2b05b28097833270e100ef4 608 SUPERFAMILY SSF81296 6 104 6.3E-5 T 12-10-2018 IPR014756 Immunoglobulin E-set CLSA_c43440 05f8ee9e19229caee35218a5d5930989 266 Gene3D G3DSA:3.40.50.1220 35 259 7.8E-73 T 12-10-2018 CLSA_c43440 05f8ee9e19229caee35218a5d5930989 266 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 28 263 61.139 T 12-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 CLSA_c43440 05f8ee9e19229caee35218a5d5930989 266 Gene3D G3DSA:3.30.1600.10 53 190 7.8E-73 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily CLSA_c43440 05f8ee9e19229caee35218a5d5930989 266 SUPERFAMILY SSF52467 14 265 1.59E-80 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c43440 05f8ee9e19229caee35218a5d5930989 266 Pfam PF02146 Sir2 family 44 220 2.0E-47 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 Gene3D G3DSA:3.90.640.10 182 257 2.1E-129 T 12-10-2018 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 SUPERFAMILY SSF53067 145 327 3.74E-49 T 12-10-2018 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 Pfam PF06723 MreB/Mbl protein 8 334 9.1E-152 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 298 324 1.3E-57 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 1.3E-57 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 45 63 1.3E-57 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 65 88 1.3E-57 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 1.3E-57 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 Gene3D G3DSA:3.30.420.40 150 315 2.1E-129 T 12-10-2018 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 8 334 1.9E-151 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 SUPERFAMILY SSF53067 8 144 1.55E-37 T 12-10-2018 CLSA_c06120 ad1ff0a51c7af2688f93ec0e5b1d0e35 339 Gene3D G3DSA:3.30.420.40 10 325 2.1E-129 T 12-10-2018 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 SUPERFAMILY SSF53244 315 457 1.83E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Gene3D G3DSA:3.40.50.720 11 98 2.3E-33 T 12-10-2018 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 SUPERFAMILY SSF51984 11 97 1.96E-29 T 12-10-2018 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 12 455 7.1E-141 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Gene3D G3DSA:3.40.1190.10 99 314 6.9E-66 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 10 459 38.694 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Gene3D G3DSA:3.90.190.20 315 459 1.4E-52 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Pfam PF01225 Mur ligase family, catalytic domain 12 110 2.8E-28 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Pfam PF08245 Mur ligase middle domain 116 295 2.1E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 SUPERFAMILY SSF53623 97 312 1.83E-59 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c01030 ec9183f9a4b6ca33a9764f9d9d20de23 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 398 5.0E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 Pfam PF01256 Carbohydrate kinase 254 493 7.0E-51 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 496 1.0E-57 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 215 24.313 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 230 501 21.044 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 SUPERFAMILY SSF64153 4 252 5.23E-53 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 Pfam PF03853 YjeF-related protein N-terminus 27 194 1.1E-36 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 Gene3D G3DSA:3.40.1190.20 227 501 1.7E-78 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 PIRSF PIRSF017184 2 502 9.4E-136 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 216 1.6E-44 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 SUPERFAMILY SSF53613 233 499 6.08E-65 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c43170 3bd356879af3ffd271b084ea57fbe936 502 Gene3D G3DSA:3.40.50.10260 2 221 1.4E-56 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CLSA_c08510 b145f4d05317065d5ad85ac0d0b9449f 497 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 497 262.157 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08510 b145f4d05317065d5ad85ac0d0b9449f 497 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 257 274 - T 12-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08510 b145f4d05317065d5ad85ac0d0b9449f 497 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 246 442 3.9E-33 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CLSA_c08510 b145f4d05317065d5ad85ac0d0b9449f 497 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 6 496 3.6E-205 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c08510 b145f4d05317065d5ad85ac0d0b9449f 497 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 23 229 8.0E-36 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 CLSA_c08510 b145f4d05317065d5ad85ac0d0b9449f 497 PIRSF PIRSF006005 1 497 4.7E-223 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 SUPERFAMILY SSF53850 111 290 1.95E-54 T 12-10-2018 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 PIRSF PIRSF001500 1 380 5.3E-103 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 SUPERFAMILY SSF48600 1 82 3.05E-18 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 Gene3D G3DSA:3.40.190.10 104 195 2.0E-23 T 12-10-2018 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 Gene3D G3DSA:3.40.190.10 196 277 7.7E-28 T 12-10-2018 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 Gene3D G3DSA:1.20.59.10 1 86 4.0E-19 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 SMART SM00830 8 87 1.2E-15 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 Pfam PF01817 Chorismate mutase type II 8 84 3.9E-17 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 SUPERFAMILY SSF55021 283 378 1.3E-24 T 12-10-2018 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 Gene3D G3DSA:3.30.70.260 292 379 5.5E-27 T 12-10-2018 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 Pfam PF00800 Prephenate dehydratase 112 289 7.1E-56 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CLSA_c06840 5930418d55f790344cbd4b394daab6c0 381 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 5 84 1.1E-23 T 12-10-2018 IPR011279 Chorismate mutase, Gram-positive CLSA_c13540 0805d45ae4509675b752de1c21b8fc82 445 SUPERFAMILY SSF50156 4 74 6.59E-9 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 CLSA_c13540 0805d45ae4509675b752de1c21b8fc82 445 SUPERFAMILY SSF102114 85 262 1.39E-11 T 12-10-2018 CLSA_c13540 0805d45ae4509675b752de1c21b8fc82 445 Gene3D G3DSA:2.30.42.10 1 77 2.4E-7 T 12-10-2018 CLSA_c13540 0805d45ae4509675b752de1c21b8fc82 445 Pfam PF04459 Protein of unknown function (DUF512) 219 427 2.2E-69 T 12-10-2018 IPR007549 Domain of unknown function DUF512 CLSA_c13540 0805d45ae4509675b752de1c21b8fc82 445 Gene3D G3DSA:3.20.20.70 119 287 8.2E-8 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Gene3D G3DSA:1.25.40.10 5 122 3.7E-31 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Pfam PF08238 Sel1 repeat 141 175 1.3E-8 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Pfam PF08238 Sel1 repeat 36 67 1.3E-7 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Pfam PF08238 Sel1 repeat 70 103 9.4E-11 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Pfam PF08238 Sel1 repeat 178 209 7.2E-6 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Pfam PF08238 Sel1 repeat 212 246 4.5E-9 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Pfam PF08238 Sel1 repeat 105 139 3.6E-11 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SUPERFAMILY SSF81901 21 105 6.28E-22 T 12-10-2018 CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SUPERFAMILY SSF81901 95 255 4.45E-45 T 12-10-2018 CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 Gene3D G3DSA:1.25.40.10 123 257 8.9E-46 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SMART SM00671 176 211 1.8E-7 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SMART SM00671 140 175 1.5E-9 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SMART SM00671 68 103 4.0E-11 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SMART SM00671 104 139 6.8E-9 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SMART SM00671 212 247 1.1E-10 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c14760 7182a29a23f88f967806beab04eccf28 258 SMART SM00671 32 67 1.6E-9 T 12-10-2018 IPR006597 Sel1-like repeat CLSA_c38970 b7c35df4f32f513bc09852a1eec92590 271 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 11 265 1.4E-93 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CLSA_c38970 b7c35df4f32f513bc09852a1eec92590 271 Gene3D G3DSA:1.10.3720.10 12 269 4.5E-64 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c38970 b7c35df4f32f513bc09852a1eec92590 271 SUPERFAMILY SSF161098 8 261 1.7E-55 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c38970 b7c35df4f32f513bc09852a1eec92590 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 260 1.3E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c38970 b7c35df4f32f513bc09852a1eec92590 271 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 10 268 2.7E-114 T 12-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 Gene3D G3DSA:3.40.50.2000 465 789 1.1E-132 T 12-10-2018 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 PIRSF PIRSF000460 1 809 7.6E-225 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 6 803 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 Pfam PF00343 Carbohydrate phosphorylase 96 803 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 Gene3D G3DSA:3.40.50.2000 1 464 1.7E-200 T 12-10-2018 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 SUPERFAMILY SSF53756 2 805 7.06E-304 T 12-10-2018 CLSA_c43800 8bba9cef1bbbde7233f34639c5b30663 811 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 648 660 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c11050 146418aa982669dbe9d09f2efb9a363a 355 Gene3D G3DSA:3.90.1200.10 113 348 2.9E-48 T 12-10-2018 CLSA_c11050 146418aa982669dbe9d09f2efb9a363a 355 Pfam PF01636 Phosphotransferase enzyme family 72 258 7.4E-9 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase CLSA_c11050 146418aa982669dbe9d09f2efb9a363a 355 Gene3D G3DSA:3.30.200.20 2 112 1.4E-28 T 12-10-2018 CLSA_c11050 146418aa982669dbe9d09f2efb9a363a 355 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 36 338 4.6E-72 T 12-10-2018 IPR014255 Spore coat protein CotS CLSA_c11050 146418aa982669dbe9d09f2efb9a363a 355 SUPERFAMILY SSF56112 12 339 1.15E-49 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c30560 e53dcab14f44bfb80242dfdb552b7bdd 180 SUPERFAMILY SSF57802 1 44 2.19E-12 T 12-10-2018 CLSA_c30560 e53dcab14f44bfb80242dfdb552b7bdd 180 Gene3D G3DSA:2.20.28.10 1 35 4.1E-15 T 12-10-2018 CLSA_c30560 e53dcab14f44bfb80242dfdb552b7bdd 180 SUPERFAMILY SSF47240 54 179 2.32E-32 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c30560 e53dcab14f44bfb80242dfdb552b7bdd 180 Pfam PF02915 Rubrerythrin 61 174 6.7E-14 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLSA_c30560 e53dcab14f44bfb80242dfdb552b7bdd 180 Gene3D G3DSA:1.20.1260.10 53 178 2.9E-25 T 12-10-2018 IPR012347 Ferritin-like CLSA_c45230 31d6e70975626d88cd6f4a9e84e47242 251 SUPERFAMILY SSF54637 151 246 1.6E-23 T 12-10-2018 IPR029069 HotDog domain superfamily CLSA_c45230 31d6e70975626d88cd6f4a9e84e47242 251 SUPERFAMILY SSF54637 3 133 7.03E-36 T 12-10-2018 IPR029069 HotDog domain superfamily CLSA_c45230 31d6e70975626d88cd6f4a9e84e47242 251 Pfam PF01643 Acyl-ACP thioesterase 3 248 1.4E-61 T 12-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 CLSA_c45230 31d6e70975626d88cd6f4a9e84e47242 251 Gene3D G3DSA:3.10.129.10 2 251 6.3E-65 T 12-10-2018 CLSA_c26490 8baaf6b8c7be4a01723c86e53f0ce0b0 192 Gene3D G3DSA:3.90.550.10 1 191 2.9E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c26490 8baaf6b8c7be4a01723c86e53f0ce0b0 192 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 188 21.622 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CLSA_c26490 8baaf6b8c7be4a01723c86e53f0ce0b0 192 SUPERFAMILY SSF53448 1 148 2.25E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c26490 8baaf6b8c7be4a01723c86e53f0ce0b0 192 Pfam PF12804 MobA-like NTP transferase domain 5 149 2.6E-26 T 12-10-2018 IPR025877 MobA-like NTP transferase CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 Gene3D G3DSA:3.50.50.60 218 342 1.1E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 SUPERFAMILY SSF46548 5 119 7.32E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 Gene3D G3DSA:1.10.1060.10 2 109 5.9E-28 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 384 1.0E-21 T 12-10-2018 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 334 350 1.0E-21 T 12-10-2018 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 1.0E-21 T 12-10-2018 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 1.0E-21 T 12-10-2018 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 357 9.4E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 132 9.4E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 372 390 9.4E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 258 9.4E-16 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 SUPERFAMILY SSF51971 108 343 2.59E-56 T 12-10-2018 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 SUPERFAMILY SSF51971 302 396 8.36E-8 T 12-10-2018 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 5 95 3.1E-27 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 109 395 6.4E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c34790 fd065f3c653d3c39b93246cc8934766c 413 Gene3D G3DSA:3.50.50.60 110 217 2.4E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 Gene3D G3DSA:3.30.70.270 459 628 9.9E-49 T 12-10-2018 CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 SMART SM00267 462 629 5.1E-44 T 12-10-2018 IPR000160 GGDEF domain CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 Gene3D G3DSA:3.30.450.20 228 346 1.7E-27 T 12-10-2018 CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 474 628 3.2E-47 T 12-10-2018 IPR000160 GGDEF domain CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 Pfam PF00990 Diguanylate cyclase, GGDEF domain 474 626 8.7E-43 T 12-10-2018 IPR000160 GGDEF domain CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 SUPERFAMILY SSF55073 478 627 1.73E-40 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 Pfam PF08269 Cache domain 38 337 2.3E-86 T 12-10-2018 IPR004010 Double Cache domain 2 CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 SMART SM01049 210 284 0.0024 T 12-10-2018 IPR033480 Single Cache domain 2 CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 SMART SM01049 75 169 1.6E-18 T 12-10-2018 IPR033480 Single Cache domain 2 CLSA_c07390 47b1e3a6909a49d6e49f7f204f8c265b 629 Gene3D G3DSA:3.30.450.20 77 227 6.7E-36 T 12-10-2018 CLSA_c40420 8564851004b279a935d013a413257b55 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 17 27 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 SUPERFAMILY SSF53748 4 391 1.77E-154 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 Gene3D G3DSA:3.40.50.1260 10 389 2.4E-158 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 Pfam PF00162 Phosphoglycerate kinase 8 381 4.9E-161 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 391 41.739 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 Gene3D G3DSA:3.40.50.1260 169 381 2.4E-158 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 311 336 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 344 355 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 108 123 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 136 158 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 367 384 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 1.8E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40420 8564851004b279a935d013a413257b55 391 PIRSF PIRSF000724 1 391 2.4E-150 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 SUPERFAMILY SSF52016 440 637 2.75E-54 T 12-10-2018 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 637 6.1E-276 T 12-10-2018 IPR006250 Aconitase, putative CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 Pfam PF00694 Aconitase C-terminal domain 522 576 1.5E-24 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 Gene3D G3DSA:3.30.499.10 270 432 7.4E-52 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 SUPERFAMILY SSF53732 2 418 3.14E-147 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 Pfam PF00330 Aconitase family (aconitate hydratase) 8 407 1.7E-109 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 Gene3D G3DSA:3.20.19.10 463 640 2.3E-47 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 PRINTS PR00415 Aconitase family signature 186 199 3.4E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 PRINTS PR00415 Aconitase family signature 124 139 3.4E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 PRINTS PR00415 Aconitase family signature 110 123 3.4E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 PRINTS PR00415 Aconitase family signature 200 213 3.4E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 PRINTS PR00415 Aconitase family signature 349 362 3.4E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 PRINTS PR00415 Aconitase family signature 90 98 3.4E-24 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLSA_c00880 a13810dbfa0f56e39388f05cafd6f8c8 640 Gene3D G3DSA:3.30.499.20 4 267 1.0E-86 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Gene3D G3DSA:3.40.50.1000 447 794 5.1E-259 T 12-10-2018 IPR023214 HAD superfamily CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 452 458 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 SUPERFAMILY SSF56784 448 844 6.75E-55 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Pfam PF00702 haloacid dehalogenase-like hydrolase 447 763 4.6E-21 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Pfam PF00690 Cation transporter/ATPase, N-terminus 130 198 7.1E-11 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 SUPERFAMILY SSF81660 457 652 2.4E-52 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Gene3D G3DSA:3.40.1110.10 460 655 5.1E-259 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Pfam PF00689 Cation transporting ATPase, C-terminus 835 983 8.2E-27 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 551 695 2.8E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 716 833 6.7E-33 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 472 1.3E-38 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 SMART SM00831 129 203 8.4E-10 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 781 806 5.1E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 749 765 5.1E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 611 629 5.1E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 721 737 5.1E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 SUPERFAMILY SSF81665 130 986 2.09E-86 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Gene3D G3DSA:2.70.150.10 142 353 5.1E-259 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Gene3D G3DSA:1.20.1110.10 181 983 5.1E-259 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 Pfam PF00122 E1-E2 ATPase 239 429 9.5E-48 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 SUPERFAMILY SSF81653 242 349 8.24E-29 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 288 302 3.9E-39 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 450 464 3.9E-39 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 749 768 3.9E-39 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 773 785 3.9E-39 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 670 680 3.9E-39 T 12-10-2018 CLSA_c33920 a683fb4ad643aa561f3402280709af20 990 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 659 3.9E-39 T 12-10-2018 CLSA_c40700 1eada7454275d967d8088622ed267805 291 Pfam PF00072 Response regulator receiver domain 6 115 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40700 1eada7454275d967d8088622ed267805 291 SUPERFAMILY SSF103039 136 280 7.06E-18 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c40700 1eada7454275d967d8088622ed267805 291 Gene3D G3DSA:3.40.1550.10 132 281 2.1E-23 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c40700 1eada7454275d967d8088622ed267805 291 SMART SM00448 4 116 1.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40700 1eada7454275d967d8088622ed267805 291 Gene3D G3DSA:3.40.50.2300 1 130 1.7E-34 T 12-10-2018 CLSA_c40700 1eada7454275d967d8088622ed267805 291 Pfam PF13690 Chemotaxis phosphatase CheX 171 258 1.5E-12 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CLSA_c40700 1eada7454275d967d8088622ed267805 291 SUPERFAMILY SSF52172 1 130 2.42E-34 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c19300 fcfede14d65d9d56bac753b4e525d19c 448 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 135 2.8E-10 T 12-10-2018 CLSA_c19300 fcfede14d65d9d56bac753b4e525d19c 448 Gene3D G3DSA:3.30.565.10 7 206 9.7E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c19300 fcfede14d65d9d56bac753b4e525d19c 448 SUPERFAMILY SSF55874 10 124 7.86E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 Gene3D G3DSA:3.30.450.20 97 208 2.6E-33 T 12-10-2018 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 Pfam PF02743 Cache domain 58 296 3.8E-31 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 SUPERFAMILY SSF103190 147 219 1.12E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 SUPERFAMILY SSF58104 367 696 2.49E-63 T 12-10-2018 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 Gene3D G3DSA:1.10.287.950 393 696 1.9E-62 T 12-10-2018 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 468 649 1.3E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 SMART SM00283 421 682 2.5E-53 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 SMART SM00304 337 392 6.3E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c09430 548ba5076da7bf6500973bc978d62b45 697 Gene3D G3DSA:3.30.450.20 88 309 2.6E-33 T 12-10-2018 CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 251 4.5E-102 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 Gene3D G3DSA:3.60.10.10 1 251 1.7E-98 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 243 2.1E-24 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 250 1.1E-99 T 12-10-2018 CLSA_c15420 db7e24b386c77149d1b324188d971d1d 252 SUPERFAMILY SSF56219 3 251 5.1E-82 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLSA_c06100 68a6f8616ecd0ea57a1b0c9652b050de 188 Pfam PF02545 Maf-like protein 2 186 5.6E-57 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 CLSA_c06100 68a6f8616ecd0ea57a1b0c9652b050de 188 SUPERFAMILY SSF52972 1 186 6.08E-57 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CLSA_c06100 68a6f8616ecd0ea57a1b0c9652b050de 188 PIRSF PIRSF006305 1 188 2.9E-58 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 CLSA_c06100 68a6f8616ecd0ea57a1b0c9652b050de 188 Gene3D G3DSA:3.90.950.10 1 188 1.4E-65 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CLSA_c06100 68a6f8616ecd0ea57a1b0c9652b050de 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.0E-52 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 CLSA_c06100 68a6f8616ecd0ea57a1b0c9652b050de 188 Hamap MF_00528 Septum formation protein Maf [maf]. 2 187 27.408 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 CLSA_c25870 7514d28d2bb88623b543528547622413 212 Gene3D G3DSA:2.160.20.80 3 120 2.4E-24 T 12-10-2018 CLSA_c25870 7514d28d2bb88623b543528547622413 212 Pfam PF13599 Pentapeptide repeats (9 copies) 51 117 3.1E-14 T 12-10-2018 IPR001646 Pentapeptide repeat CLSA_c25870 7514d28d2bb88623b543528547622413 212 SUPERFAMILY SSF141571 13 127 1.7E-26 T 12-10-2018 CLSA_c02030 b646f46f569a17e8b6e30ee63d9a8b84 98 ProSitePatterns PS00050 Ribosomal protein L23 signature. 78 93 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02030 b646f46f569a17e8b6e30ee63d9a8b84 98 Gene3D G3DSA:3.30.70.330 3 98 9.3E-34 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLSA_c02030 b646f46f569a17e8b6e30ee63d9a8b84 98 Pfam PF00276 Ribosomal protein L23 7 89 1.1E-33 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CLSA_c02030 b646f46f569a17e8b6e30ee63d9a8b84 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 6 96 21.952 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CLSA_c02030 b646f46f569a17e8b6e30ee63d9a8b84 98 SUPERFAMILY SSF54189 5 95 1.87E-32 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 SUPERFAMILY SSF54211 1 154 9.87E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 Gene3D G3DSA:3.30.70.890 161 279 7.0E-26 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 Pfam PF00288 GHMP kinases N terminal domain 84 141 1.9E-7 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 277 33.702 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 Gene3D G3DSA:3.30.230.10 1 156 2.6E-57 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 Pfam PF08544 GHMP kinases C terminal 189 272 1.4E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 SUPERFAMILY SSF55060 159 279 1.01E-25 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 273 7.0E-80 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CLSA_c04900 f9a7c86475189af7d0319fbb76326707 280 PIRSF PIRSF010376 1 280 2.2E-94 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.6E-226 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 SMART SM00878 336 442 2.0E-68 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 1.1E-41 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.2E-80 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 SUPERFAMILY SSF52440 1 113 1.87E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 Gene3D G3DSA:3.30.470.130 1 448 1.4E-198 T 12-10-2018 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.0E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 SUPERFAMILY SSF56059 83 348 1.31E-73 T 12-10-2018 CLSA_c30850 a890d4f3a82242c1ef5b9e85c88d4a81 448 SUPERFAMILY SSF51246 331 443 7.85E-45 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CLSA_c21110 301853ee35195da930d7dddaf5f79d70 514 PIRSF PIRSF002741 1 514 2.1E-96 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLSA_c21110 301853ee35195da930d7dddaf5f79d70 514 SUPERFAMILY SSF53850 35 509 1.59E-121 T 12-10-2018 CLSA_c21110 301853ee35195da930d7dddaf5f79d70 514 Gene3D G3DSA:3.10.105.10 262 471 8.7E-127 T 12-10-2018 CLSA_c21110 301853ee35195da930d7dddaf5f79d70 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 434 5.0E-85 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain CLSA_c21110 301853ee35195da930d7dddaf5f79d70 514 Gene3D G3DSA:3.40.190.10 62 261 8.7E-127 T 12-10-2018 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 Gene3D G3DSA:1.10.287.10 15 102 1.6E-35 T 12-10-2018 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 23 101 1.0E-30 T 12-10-2018 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 18 102 7.6E-40 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 SUPERFAMILY SSF47060 16 102 2.38E-37 T 12-10-2018 IPR009068 S15/NS1, RNA-binding CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 ProSitePatterns PS00362 Ribosomal protein S15 signature. 52 82 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 SMART SM01387 21 101 1.1E-55 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 Pfam PF00312 Ribosomal protein S15 21 101 3.2E-39 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14460 af72b841a7551362e2ac0bbb8571c0d2 102 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 16 102 22.991 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c37090 ddac338eae2828fe82550f69c279571b 369 TIGRFAM TIGR04066 nat_prod_clost: peptide maturation system protein, TIGR04066 family 6 361 8.3E-82 T 12-10-2018 IPR023823 Conserved hypothetical protein CHP04066, peptide maturation system CLSA_c39390 5823c1387531b0a0e075b9c4a9ccc4a8 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 12 133 2.1E-30 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CLSA_c39390 5823c1387531b0a0e075b9c4a9ccc4a8 133 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 18 38 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site CLSA_c39390 5823c1387531b0a0e075b9c4a9ccc4a8 133 PIRSF PIRSF002889 3 133 2.3E-36 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CLSA_c06340 ae1309d9d1b2f00c643c97b6f6254800 878 Pfam PF02687 FtsX-like permease family 776 866 9.8E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c06340 ae1309d9d1b2f00c643c97b6f6254800 878 Pfam PF02687 FtsX-like permease family 312 407 1.3E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c21210 f6536835b72df39589354d96fc10b3a5 137 Gene3D G3DSA:1.10.10.1100 23 78 1.3E-14 T 12-10-2018 CLSA_c21210 f6536835b72df39589354d96fc10b3a5 137 Gene3D G3DSA:1.10.10.1100 84 136 5.0E-15 T 12-10-2018 CLSA_c21210 f6536835b72df39589354d96fc10b3a5 137 Pfam PF04324 BFD-like [2Fe-2S] binding domain 23 70 1.5E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CLSA_c21210 f6536835b72df39589354d96fc10b3a5 137 Pfam PF04324 BFD-like [2Fe-2S] binding domain 84 132 4.9E-16 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CLSA_c11320 7a36d41f28b2e7b9cc6376ffbd1cbb18 242 ProSitePatterns PS00770 Aminotransferases class-IV signature. 153 182 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 CLSA_c11320 7a36d41f28b2e7b9cc6376ffbd1cbb18 242 SUPERFAMILY SSF56752 14 240 7.98E-54 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CLSA_c11320 7a36d41f28b2e7b9cc6376ffbd1cbb18 242 Gene3D G3DSA:3.20.10.10 97 241 1.5E-44 T 12-10-2018 CLSA_c11320 7a36d41f28b2e7b9cc6376ffbd1cbb18 242 Pfam PF01063 Amino-transferase class IV 22 222 6.9E-46 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CLSA_c11320 7a36d41f28b2e7b9cc6376ffbd1cbb18 242 Gene3D G3DSA:3.30.470.10 2 96 2.1E-13 T 12-10-2018 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 PIRSF PIRSF002937 1 274 1.1E-137 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 164 272 8.0E-58 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 4 274 5.1E-131 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 SUPERFAMILY SSF52172 4 127 6.69E-31 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 SUPERFAMILY SSF46894 158 272 1.96E-49 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 SMART SM00448 6 121 1.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 Pfam PF00072 Response regulator receiver domain 8 121 1.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 164 267 1.5E-46 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 Gene3D G3DSA:1.10.10.10 156 274 2.8E-53 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c26780 6a1580dc9595da2f3a8481b692db967a 274 Gene3D G3DSA:3.40.50.2300 1 131 5.0E-31 T 12-10-2018 CLSA_c29720 8a27f23dc373ba15d1f2ca0ead77e1f4 336 Gene3D G3DSA:2.60.40.1080 174 255 2.5E-19 T 12-10-2018 CLSA_c29720 8a27f23dc373ba15d1f2ca0ead77e1f4 336 SUPERFAMILY SSF49373 175 254 2.71E-16 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c29720 8a27f23dc373ba15d1f2ca0ead77e1f4 336 Pfam PF02368 Bacterial Ig-like domain (group 2) 179 250 3.7E-16 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c29720 8a27f23dc373ba15d1f2ca0ead77e1f4 336 SMART SM00635 176 251 2.3E-14 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c35900 3199f85874d09811679de55c172fb001 282 SMART SM00645 59 281 1.3E-6 T 12-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 CLSA_c35900 3199f85874d09811679de55c172fb001 282 Pfam PF00112 Papain family cysteine protease 59 278 4.2E-19 T 12-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 CLSA_c35900 3199f85874d09811679de55c172fb001 282 Gene3D G3DSA:3.90.70.10 42 279 3.6E-56 T 12-10-2018 CLSA_c35900 3199f85874d09811679de55c172fb001 282 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 229 239 - T 12-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 CLSA_c35900 3199f85874d09811679de55c172fb001 282 SUPERFAMILY SSF54001 50 278 2.53E-42 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 Gene3D G3DSA:1.20.1560.10 152 468 1.1E-89 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 SUPERFAMILY SSF90123 150 466 1.7E-69 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 Gene3D G3DSA:3.90.70.10 1 150 2.7E-50 T 12-10-2018 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 Pfam PF00664 ABC transporter transmembrane region 167 436 8.2E-51 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 Pfam PF00005 ABC transporter 498 647 4.7E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 SMART SM00382 507 692 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 Pfam PF03412 Peptidase C39 family 7 141 1.4E-39 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 Gene3D G3DSA:3.40.50.300 472 726 7.4E-88 T 12-10-2018 CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 SUPERFAMILY SSF52540 475 717 5.46E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01140 530e8503c84e64a1f229b0c3756cb4fd 730 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 12 714 1.7E-209 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 CLSA_c40140 da471511da41d131115954f68ea1474f 238 Gene3D G3DSA:3.20.20.370 18 235 2.9E-57 T 12-10-2018 CLSA_c40140 da471511da41d131115954f68ea1474f 238 Pfam PF01522 Polysaccharide deacetylase 32 143 2.5E-26 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c40140 da471511da41d131115954f68ea1474f 238 SUPERFAMILY SSF88713 31 226 1.78E-49 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c26930 7c53a3d132dadc8049ecef08c8583e2c 201 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 14 196 3.2E-32 T 12-10-2018 IPR014245 Sporulation stage III, protein AF CLSA_c26930 7c53a3d132dadc8049ecef08c8583e2c 201 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 5 105 4.4E-21 T 12-10-2018 IPR014245 Sporulation stage III, protein AF CLSA_c09340 91912aa2818b954aac790b2b37e88375 242 SUPERFAMILY SSF50249 109 189 1.89E-9 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c09340 91912aa2818b954aac790b2b37e88375 242 Gene3D G3DSA:2.40.50.140 100 214 5.0E-10 T 12-10-2018 CLSA_c09340 91912aa2818b954aac790b2b37e88375 242 Pfam PF00436 Single-strand binding protein family 109 202 3.6E-7 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CLSA_c29490 c3de3bd445f9d9cca458c52a3a66650f 307 Gene3D G3DSA:3.40.1360.10 189 307 7.8E-6 T 12-10-2018 CLSA_c29490 c3de3bd445f9d9cca458c52a3a66650f 307 Pfam PF13155 Toprim-like 208 301 6.4E-12 T 12-10-2018 CLSA_c29490 c3de3bd445f9d9cca458c52a3a66650f 307 SUPERFAMILY SSF56731 129 305 4.84E-7 T 12-10-2018 CLSA_c29490 c3de3bd445f9d9cca458c52a3a66650f 307 Pfam PF13154 Protein of unknown function (DUF3991) 125 191 1.1E-15 T 12-10-2018 IPR025054 Domain of unknown function DUF3991 CLSA_c29490 c3de3bd445f9d9cca458c52a3a66650f 307 SUPERFAMILY SSF57783 1 87 5.61E-7 T 12-10-2018 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 520 532 3.2E-5 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 541 557 3.2E-5 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 612 623 3.2E-5 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 Pfam PF05649 Peptidase family M13 62 448 2.3E-61 T 12-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 Pfam PF01431 Peptidase family M13 512 701 1.4E-40 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 Gene3D G3DSA:1.10.1380.10 89 495 5.1E-149 T 12-10-2018 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 SUPERFAMILY SSF55486 59 704 4.03E-126 T 12-10-2018 CLSA_c42620 31c814d4a8cc65869e9e998a10dd3433 705 Gene3D G3DSA:3.40.390.10 59 704 5.1E-149 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CLSA_c17330 30190a811b00229cf74b70710e5e497b 272 Gene3D G3DSA:3.90.1720.10 146 271 1.0E-31 T 12-10-2018 CLSA_c17330 30190a811b00229cf74b70710e5e497b 272 SUPERFAMILY SSF54001 149 251 2.13E-31 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c17330 30190a811b00229cf74b70710e5e497b 272 Gene3D G3DSA:2.30.30.40 69 135 2.3E-10 T 12-10-2018 CLSA_c17330 30190a811b00229cf74b70710e5e497b 272 Pfam PF00877 NlpC/P60 family 164 252 1.3E-22 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CLSA_c17330 30190a811b00229cf74b70710e5e497b 272 Gene3D G3DSA:2.30.30.40 1 62 1.5E-8 T 12-10-2018 CLSA_c23070 99fd6485e7883e921d7dc36d1a886fe8 357 Gene3D G3DSA:3.40.50.11790 89 256 3.2E-34 T 12-10-2018 CLSA_c23070 99fd6485e7883e921d7dc36d1a886fe8 357 Pfam PF17482 Phage tail sheath C-terminal domain 237 357 4.4E-11 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain CLSA_c23070 99fd6485e7883e921d7dc36d1a886fe8 357 Gene3D G3DSA:1.10.10.2290 147 226 3.2E-34 T 12-10-2018 CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 408 1.0E-189 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 SUPERFAMILY SSF53901 212 409 1.08E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 3.6E-60 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 SUPERFAMILY SSF53901 3 250 2.25E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 SMART SM00825 Beta-ketoacyl synthase 5 412 8.4E-17 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 367 1.2E-38 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 Gene3D G3DSA:3.40.47.10 1 253 2.9E-95 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 Gene3D G3DSA:3.40.47.10 255 399 2.0E-55 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c25610 4517a628d9acdf749a136cd8ce38497c 412 PIRSF PIRSF000447 1 411 2.4E-180 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CLSA_c33360 b4cf5e41b6795ff0d037f72206b70ed0 169 Pfam PF13302 Acetyltransferase (GNAT) domain 45 153 7.8E-15 T 12-10-2018 IPR000182 GNAT domain CLSA_c33360 b4cf5e41b6795ff0d037f72206b70ed0 169 Gene3D G3DSA:3.40.630.30 2 167 8.6E-24 T 12-10-2018 CLSA_c33360 b4cf5e41b6795ff0d037f72206b70ed0 169 SUPERFAMILY SSF55729 5 159 1.17E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c42210 e70dba851d2fe8434f4af2410a3a8be0 99 SUPERFAMILY SSF81301 8 98 2.34E-14 T 12-10-2018 CLSA_c42210 e70dba851d2fe8434f4af2410a3a8be0 99 Gene3D G3DSA:3.30.460.10 1 99 2.3E-18 T 12-10-2018 CLSA_c42210 e70dba851d2fe8434f4af2410a3a8be0 99 Pfam PF01909 Nucleotidyltransferase domain 17 89 1.1E-8 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 Gene3D G3DSA:3.40.50.150 65 269 6.8E-85 T 12-10-2018 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 238 1.4E-87 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 PIRSF PIRSF005578 1 265 2.3E-107 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 SMART SM00363 6 71 5.6E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 SUPERFAMILY SSF53335 28 248 5.32E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 Gene3D G3DSA:3.10.290.10 1 64 1.1E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 Pfam PF01479 S4 domain 6 48 1.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c26830 29534280784b5cce9df9515f71be16a8 269 Pfam PF01728 FtsJ-like methyltransferase 62 242 2.4E-22 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 Gene3D G3DSA:1.25.40.10 382 746 1.4E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 Gene3D G3DSA:3.40.50.300 7 162 5.4E-8 T 12-10-2018 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 SUPERFAMILY SSF52540 7 221 6.13E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 762 776 1.0E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 792 804 1.0E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 776 792 1.0E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 SUPERFAMILY SSF48452 440 546 3.6E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 SUPERFAMILY SSF46894 758 822 5.44E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 Gene3D G3DSA:1.10.10.10 752 822 1.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 Pfam PF00196 Bacterial regulatory proteins, luxR family 762 814 6.5E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c38830 a274328a4e93943320cec8987f3478a6 822 SMART SM00421 759 816 5.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c33110 3065ef91253fc3bbd4bdc9409d2c637c 286 Gene3D G3DSA:3.30.70.120 196 271 7.9E-25 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c33110 3065ef91253fc3bbd4bdc9409d2c637c 286 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 16 219 1.6E-65 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c33110 3065ef91253fc3bbd4bdc9409d2c637c 286 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 224 274 1.6E-18 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 CLSA_c33110 3065ef91253fc3bbd4bdc9409d2c637c 286 PIRSF PIRSF006483 1 285 8.3E-88 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 TIGRFAM TIGR03963 rSAM_QueE_Clost: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 222 2.0E-99 T 12-10-2018 IPR023868 7-carboxy-7-deazaguanine synthase, Clostridial form KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 PIRSF PIRSF000370 1 221 1.9E-60 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 218 37.012 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 SUPERFAMILY SSF102114 23 134 7.46E-18 T 12-10-2018 CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 Gene3D G3DSA:3.20.20.70 1 215 3.8E-39 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 Pfam PF13394 4Fe-4S single cluster domain 24 109 4.1E-15 T 12-10-2018 CLSA_c15600 99d14149a6685c668e13b60ca52e00ad 222 Pfam PF04055 Radical SAM superfamily 26 105 1.4E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c13450 12a514f1bf23fb98ad9e33f298412c0d 149 Pfam PF03477 ATP cone domain 50 136 1.3E-16 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CLSA_c13450 12a514f1bf23fb98ad9e33f298412c0d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.8E-58 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CLSA_c13450 12a514f1bf23fb98ad9e33f298412c0d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 81.644 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Gene3D G3DSA:3.30.450.20 167 290 9.0E-12 T 12-10-2018 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Gene3D G3DSA:3.30.70.270 629 800 3.1E-43 T 12-10-2018 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SMART SM00304 318 370 0.0018 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SUPERFAMILY SSF55785 493 622 2.27E-11 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 635 795 1.1E-37 T 12-10-2018 IPR000160 GGDEF domain CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Gene3D G3DSA:3.30.450.20 395 496 2.3E-18 T 12-10-2018 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SUPERFAMILY SSF55785 395 492 4.54E-15 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SMART SM00086 583 625 0.064 T 12-10-2018 IPR001610 PAC motif CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SMART SM00086 455 496 0.72 T 12-10-2018 IPR001610 PAC motif CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 636 792 7.4E-38 T 12-10-2018 IPR000160 GGDEF domain CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Gene3D G3DSA:3.30.450.20 498 622 2.4E-16 T 12-10-2018 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SUPERFAMILY SSF158472 320 366 5.36E-6 T 12-10-2018 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Pfam PF08447 PAS fold 558 619 4.4E-6 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Pfam PF08447 PAS fold 405 488 1.4E-17 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SUPERFAMILY SSF55073 641 799 2.28E-40 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 408 503 1.6E-10 T 12-10-2018 IPR000014 PAS domain CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Pfam PF02743 Cache domain 35 280 2.1E-19 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 Gene3D G3DSA:1.20.1480.50 291 376 2.4E-6 T 12-10-2018 CLSA_c41420 09fc5a9396c925a1a635d89a8674b244 801 SMART SM00267 626 797 2.4E-41 T 12-10-2018 IPR000160 GGDEF domain CLSA_c35600 f99a7921dddc825e4394493a6d09c448 229 TIGRFAM TIGR01453 grpIintron_endo: group I intron endonuclease 1 210 9.0E-29 T 12-10-2018 IPR006350 Intron endonuclease, group I GO:0004519 CLSA_c35600 f99a7921dddc825e4394493a6d09c448 229 SMART SM00465 1 95 2.0E-5 T 12-10-2018 IPR000305 GIY-YIG endonuclease CLSA_c35600 f99a7921dddc825e4394493a6d09c448 229 Gene3D G3DSA:3.40.1440.10 1 97 2.0E-30 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CLSA_c35600 f99a7921dddc825e4394493a6d09c448 229 SUPERFAMILY SSF82771 3 92 4.84E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CLSA_c35600 f99a7921dddc825e4394493a6d09c448 229 Pfam PF01541 GIY-YIG catalytic domain 3 85 1.9E-9 T 12-10-2018 IPR000305 GIY-YIG endonuclease CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 SUPERFAMILY SSF69360 85 243 1.49E-50 T 12-10-2018 CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Gene3D G3DSA:2.10.270.10 183 242 1.2E-11 T 12-10-2018 CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 266 299 - T 12-10-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 SMART SM00641 262 367 1.9E-14 T 12-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Gene3D G3DSA:2.10.270.10 52 182 8.5E-32 T 12-10-2018 CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 SUPERFAMILY SSF51445 263 446 7.9E-48 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Pfam PF01473 Putative cell wall binding repeat 146 164 0.0013 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Pfam PF01473 Putative cell wall binding repeat 206 221 0.12 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Pfam PF01473 Putative cell wall binding repeat 126 144 1.7E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Pfam PF01473 Putative cell wall binding repeat 106 124 2.0E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Pfam PF01473 Putative cell wall binding repeat 187 204 8.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Gene3D G3DSA:3.20.20.80 245 449 8.7E-59 T 12-10-2018 CLSA_c24140 e5b6dd8294543df0f46a70df5c10acc9 449 Pfam PF01183 Glycosyl hydrolases family 25 265 434 6.2E-40 T 12-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CLSA_c29560 bb476400fdcd80c738281233f64d4593 149 Pfam PF12844 Helix-turn-helix domain 9 66 1.1E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c29560 bb476400fdcd80c738281233f64d4593 149 SMART SM00530 11 67 2.5E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c29560 bb476400fdcd80c738281233f64d4593 149 Gene3D G3DSA:1.10.260.40 7 144 1.2E-14 T 12-10-2018 CLSA_c29560 bb476400fdcd80c738281233f64d4593 149 SUPERFAMILY SSF47413 6 65 4.79E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c07680 6056f4088e921b838a43f36297ef2dd5 362 SMART SM01204 219 349 9.4E-4 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CLSA_c07680 6056f4088e921b838a43f36297ef2dd5 362 Pfam PF10442 FIST C domain 220 347 1.4E-8 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CLSA_c07680 6056f4088e921b838a43f36297ef2dd5 362 Pfam PF08495 FIST N domain 29 217 4.8E-20 T 12-10-2018 IPR013702 FIST domain, N-terminal CLSA_c07680 6056f4088e921b838a43f36297ef2dd5 362 SMART SM00897 26 218 7.6E-7 T 12-10-2018 IPR013702 FIST domain, N-terminal CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Gene3D G3DSA:3.20.20.70 529 833 6.7E-268 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SUPERFAMILY SSF56059 107 379 5.22E-69 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Gene3D G3DSA:1.10.472.90 834 958 6.7E-268 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 PIRSF PIRSF001594 20 1165 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SUPERFAMILY SSF52440 18 137 7.19E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SUPERFAMILY SSF89000 849 1025 3.02E-56 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 310 317 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Pfam PF00682 HMGL-like 550 822 5.5E-32 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Gene3D G3DSA:1.10.10.2790 959 994 6.7E-268 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Gene3D G3DSA:3.10.600.10 526 1075 6.7E-268 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Gene3D G3DSA:3.30.470.130 13 481 3.8E-195 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SUPERFAMILY SSF51569 541 851 2.38E-81 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Pfam PF00364 Biotin-requiring enzyme 1099 1164 2.1E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Pfam PF02436 Conserved carboxylase domain 844 1043 6.8E-72 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SUPERFAMILY SSF51246 361 478 3.66E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SMART SM00878 366 473 1.6E-41 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 139 346 3.7E-78 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 27 1164 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Gene3D G3DSA:2.40.50.100 1088 1163 9.1E-22 T 12-10-2018 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1121 1138 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Pfam PF02785 Biotin carboxylase C-terminal domain 366 473 1.3E-27 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 177 191 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 SUPERFAMILY SSF51230 1088 1164 9.68E-21 T 12-10-2018 IPR011053 Single hybrid motif CLSA_c10210 78c1faeddb776301d6767142247f66d4 1165 Pfam PF00289 Biotin carboxylase, N-terminal domain 25 134 9.8E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c29450 fa3c7bb2d15d5023ada291241a1e7c6b 180 SUPERFAMILY SSF47413 9 82 3.85E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c29450 fa3c7bb2d15d5023ada291241a1e7c6b 180 Gene3D G3DSA:1.10.260.40 6 84 3.6E-8 T 12-10-2018 CLSA_c36960 344f261d30e6a78ec64b2b1483ce0e39 159 Pfam PF01638 HxlR-like helix-turn-helix 61 148 9.6E-35 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type CLSA_c36960 344f261d30e6a78ec64b2b1483ce0e39 159 Gene3D G3DSA:1.10.10.10 34 159 4.0E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36960 344f261d30e6a78ec64b2b1483ce0e39 159 SUPERFAMILY SSF46785 50 147 9.97E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 183 6.2E-68 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 176 37.316 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 SUPERFAMILY SSF53178 1 184 1.44E-67 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 Gene3D G3DSA:3.40.50.1470 1 190 6.1E-71 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CLSA_c01100 19f0e40d58f0748558861976346ca9b3 191 Pfam PF01195 Peptidyl-tRNA hydrolase 3 183 3.2E-62 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLSA_c05590 f4e5c3e1a556588eac282f73cc46ce62 187 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 17 178 5.5E-31 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLSA_c05590 f4e5c3e1a556588eac282f73cc46ce62 187 PIRSF PIRSF006091 4 185 6.8E-34 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLSA_c05590 f4e5c3e1a556588eac282f73cc46ce62 187 Pfam PF04205 FMN-binding domain 92 177 1.3E-20 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c05590 f4e5c3e1a556588eac282f73cc46ce62 187 SMART SM00900 92 180 9.9E-25 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c05590 f4e5c3e1a556588eac282f73cc46ce62 187 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 9 182 21.277 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLSA_c39650 8540b9fd1be85d168a43f642fce80aea 645 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 341 635 1.1E-34 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 CLSA_c39650 8540b9fd1be85d168a43f642fce80aea 645 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 25 127 5.0E-20 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CLSA_c18180 cc177a5cf6f4bea7c74d9b0d24c6adb6 249 SUPERFAMILY SSF55469 1 245 2.22E-66 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c18180 cc177a5cf6f4bea7c74d9b0d24c6adb6 249 Pfam PF00881 Nitroreductase family 8 164 5.1E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c18180 cc177a5cf6f4bea7c74d9b0d24c6adb6 249 PIRSF PIRSF005426 1 246 1.5E-85 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CLSA_c18180 cc177a5cf6f4bea7c74d9b0d24c6adb6 249 Gene3D G3DSA:3.40.109.10 1 249 1.1E-71 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 Gene3D G3DSA:2.10.270.10 3 106 1.4E-22 T 12-10-2018 CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 Pfam PF00959 Phage lysozyme 134 252 7.9E-11 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 Gene3D G3DSA:1.10.530.40 108 264 9.8E-32 T 12-10-2018 CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 Pfam PF01473 Putative cell wall binding repeat 18 35 3.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 Pfam PF01473 Putative cell wall binding repeat 59 79 2.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 Pfam PF01473 Putative cell wall binding repeat 37 52 0.0019 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 SUPERFAMILY SSF53955 107 261 2.66E-25 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c22880 0e27f4427bfd8eec2e02d734611d33df 267 SUPERFAMILY SSF69360 5 108 3.14E-23 T 12-10-2018 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 SUPERFAMILY SSF52172 5 127 4.84E-33 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 Pfam PF00072 Response regulator receiver domain 7 118 1.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 SMART SM00342 180 263 7.7E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 Gene3D G3DSA:1.10.10.2730 218 264 5.5E-14 T 12-10-2018 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 SUPERFAMILY SSF46689 164 213 4.57E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 Gene3D G3DSA:3.40.50.2300 4 140 1.4E-32 T 12-10-2018 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 SUPERFAMILY SSF46689 217 264 1.22E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 Gene3D G3DSA:1.10.10.60 160 216 1.7E-15 T 12-10-2018 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 SMART SM00448 5 119 4.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36390 295e60fe5208381bcbdb9c158140e675 267 Pfam PF12833 Helix-turn-helix domain 187 264 1.1E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 3.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 Gene3D G3DSA:3.40.50.2300 1 123 1.3E-30 T 12-10-2018 CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 SUPERFAMILY SSF46894 124 222 1.45E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 Gene3D G3DSA:1.10.10.10 124 224 3.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 SMART SM00448 2 112 3.1E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 SUPERFAMILY SSF52172 1 121 1.85E-32 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c00580 7bca2e73157f0bcd1825dcafff057b6c 227 SMART SM00862 146 221 1.1E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Pfam PF14449 Pre-toxin TG 509 573 4.3E-17 T 12-10-2018 IPR027797 Pre-toxin TG domain CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2300 2374 4.3E-23 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:3.90.930.1 1018 1137 8.2E-9 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:3.90.930.1 1729 1831 2.6E-9 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:3.90.930.1 1589 1728 1.4E-7 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:2.180.10.10 2109 2374 7.2E-32 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:2.180.10.10 1999 2108 1.0E-5 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1739 1780 5.2E-7 T 12-10-2018 IPR006530 YD repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1037 1072 3.4E-5 T 12-10-2018 IPR006530 YD repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1620 1653 7.0E-5 T 12-10-2018 IPR006530 YD repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1781 1821 5.7E-5 T 12-10-2018 IPR006530 YD repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Pfam PF05954 Phage late control gene D protein (GPD) 66 170 1.3E-8 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Pfam PF05593 RHS Repeat 1761 1797 4.0E-6 T 12-10-2018 IPR031325 RHS repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Pfam PF05593 RHS Repeat 1036 1071 1.6E-5 T 12-10-2018 IPR031325 RHS repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Pfam PF05593 RHS Repeat 1739 1775 1.3E-7 T 12-10-2018 IPR031325 RHS repeat CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:3.55.50.10 96 169 2.0E-6 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 SUPERFAMILY SSF69279 6 173 1.3E-18 T 12-10-2018 CLSA_c08340 80a64270f83e601377d42477544ca13d 2521 Gene3D G3DSA:2.30.110.50 65 95 2.0E-6 T 12-10-2018 CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 Gene3D G3DSA:3.40.50.2300 1 129 3.6E-39 T 12-10-2018 CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 Pfam PF00072 Response regulator receiver domain 5 113 6.3E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 8.7E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 SUPERFAMILY SSF52172 3 173 4.39E-41 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 SMART SM00448 3 113 4.0E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 Gene3D G3DSA:1.10.10.10 130 223 3.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c27890 9f49b43ef3d36d1138f4ece753261912 223 SMART SM00862 147 220 1.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c25440 1b3db7275f1a809e0381ab3680aca8dc 314 Pfam PF00005 ABC transporter 21 163 8.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c25440 1b3db7275f1a809e0381ab3680aca8dc 314 SMART SM00382 29 212 4.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c25440 1b3db7275f1a809e0381ab3680aca8dc 314 SUPERFAMILY SSF52540 4 231 1.96E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25440 1b3db7275f1a809e0381ab3680aca8dc 314 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c25440 1b3db7275f1a809e0381ab3680aca8dc 314 Gene3D G3DSA:3.40.50.300 1 243 1.3E-73 T 12-10-2018 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SMART SM00387 438 554 1.1E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF52172 569 702 5.27E-25 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF47226 817 947 4.06E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 553 2.9E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF52172 717 836 1.41E-37 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:1.10.287.130 303 389 7.7E-27 T 12-10-2018 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SMART SM00448 571 689 2.7E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SMART SM00448 720 834 4.2E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:3.40.50.2300 569 719 3.6E-26 T 12-10-2018 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF55781 39 176 1.26E-10 T 12-10-2018 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF01590 GAF domain 39 174 9.1E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:3.40.50.12740 720 852 1.3E-42 T 12-10-2018 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF47384 312 392 1.26E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:3.30.450.20 192 302 7.8E-12 T 12-10-2018 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SMART SM00388 326 391 8.9E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF55785 197 307 3.32E-13 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF01627 Hpt domain 872 934 7.6E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:3.30.565.10 392 560 6.5E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF00072 Response regulator receiver domain 722 834 4.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF00072 Response regulator receiver domain 573 689 3.0E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF13426 PAS domain 217 305 1.4E-6 T 12-10-2018 IPR000014 PAS domain CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 310 1.2E-8 T 12-10-2018 IPR000014 PAS domain CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 507 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 493 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 SUPERFAMILY SSF55874 380 550 5.24E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:1.20.120.160 853 948 4.3E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Gene3D G3DSA:3.30.450.40 32 187 1.6E-14 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c22040 870e276541ef53bcddceae2934557cb0 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 390 1.4E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SUPERFAMILY SSF55052 171 252 2.09E-12 T 12-10-2018 IPR035891 CheY-binding domain of CheA CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SMART SM00260 542 680 9.9E-36 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Gene3D G3DSA:3.30.70.1110 169 255 4.2E-8 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Gene3D G3DSA:2.40.50.180 573 635 2.4E-42 T 12-10-2018 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Gene3D G3DSA:2.30.30.40 550 676 2.4E-42 T 12-10-2018 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 549 1.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Gene3D G3DSA:3.30.565.10 363 549 2.4E-58 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SUPERFAMILY SSF50341 549 678 2.88E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SMART SM00387 407 550 1.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SMART SM01231 294 362 3.5E-19 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SUPERFAMILY SSF47226 8 130 8.11E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SMART SM00073 7 104 9.3E-21 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SUPERFAMILY SSF55874 364 548 1.31E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Gene3D G3DSA:1.10.287.560 294 362 9.4E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Pfam PF01584 CheW-like domain 555 680 3.8E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 294 361 5.0E-18 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 2.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 2.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 2.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Pfam PF01627 Hpt domain 9 93 6.4E-15 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 SUPERFAMILY SSF47384 295 363 2.98E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Pfam PF07194 P2 response regulator binding domain 175 251 9.6E-14 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLSA_c23280 3312d7d7a41181406bcda924ae128610 699 Gene3D G3DSA:1.20.120.160 5 112 1.6E-31 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 CLSA_c27550 ab7a968b6f31b97f35bd75f09e8192f5 381 Gene3D G3DSA:3.90.1150.10 26 370 5.5E-111 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c27550 ab7a968b6f31b97f35bd75f09e8192f5 381 Pfam PF00155 Aminotransferase class I and II 27 370 6.4E-59 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c27550 ab7a968b6f31b97f35bd75f09e8192f5 381 Gene3D G3DSA:3.40.640.10 54 273 5.5E-111 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c27550 ab7a968b6f31b97f35bd75f09e8192f5 381 SUPERFAMILY SSF53383 2 375 8.51E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c27550 ab7a968b6f31b97f35bd75f09e8192f5 381 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLSA_c23330 47b3b12da9068045a2eb3624a35930ab 82 Pfam PF09851 Short C-terminal domain 52 78 5.8E-7 T 12-10-2018 IPR018649 SHOCT domain CLSA_c29680 394546aefe989c041c20b4a9f504e02d 275 Gene3D G3DSA:3.40.570.10 27 271 1.3E-85 T 12-10-2018 CLSA_c29680 394546aefe989c041c20b4a9f504e02d 275 SMART SM00477 52 260 4.8E-37 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CLSA_c29680 394546aefe989c041c20b4a9f504e02d 275 Pfam PF01223 DNA/RNA non-specific endonuclease 43 259 2.3E-47 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CLSA_c29680 394546aefe989c041c20b4a9f504e02d 275 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 111 119 - T 12-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 CLSA_c29680 394546aefe989c041c20b4a9f504e02d 275 SUPERFAMILY SSF54060 27 270 1.88E-63 T 12-10-2018 CLSA_c29680 394546aefe989c041c20b4a9f504e02d 275 SMART SM00892 51 260 3.5E-40 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Pfam PF16326 ABC transporter C-terminal domain 567 633 2.6E-19 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 SUPERFAMILY SSF52540 324 510 2.25E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Gene3D G3DSA:1.10.287.380 559 637 2.0E-10 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Pfam PF00005 ABC transporter 19 189 1.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 SUPERFAMILY SSF52540 4 239 8.71E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Pfam PF12848 ABC transporter 228 307 1.7E-15 T 12-10-2018 IPR032781 ABC-transporter extension domain CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 SMART SM00382 28 234 7.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 SMART SM00382 345 515 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Pfam PF00005 ABC transporter 337 471 4.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Gene3D G3DSA:3.40.50.300 284 558 2.0E-56 T 12-10-2018 CLSA_c23470 c77593c63b38d1e2b97eeeb820b3f0ba 645 Gene3D G3DSA:3.40.50.300 1 283 6.1E-71 T 12-10-2018 CLSA_c05700 b186ddbca33af8c1cd1052532ebfb84e 194 Gene3D G3DSA:1.10.1760.20 1 180 6.2E-50 T 12-10-2018 CLSA_c05700 b186ddbca33af8c1cd1052532ebfb84e 194 Pfam PF12822 ECF transporter, substrate-specific component 7 170 3.1E-28 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLSA_c05700 b186ddbca33af8c1cd1052532ebfb84e 194 PIRSF PIRSF037778 1 181 1.0E-43 T 12-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 Gene3D G3DSA:3.40.50.2300 1 122 2.7E-30 T 12-10-2018 CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 SUPERFAMILY SSF52172 1 175 1.41E-33 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 Gene3D G3DSA:1.10.10.10 123 225 1.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 SMART SM00862 147 223 1.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 SMART SM00448 2 112 4.2E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 3.0E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c20850 5260a44c28b4fde6a40305711224dc82 225 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c04140 07d08862da417c7b616724cc8e9442a6 63 Gene3D G3DSA:1.10.260.40 1 63 5.6E-13 T 12-10-2018 CLSA_c04140 07d08862da417c7b616724cc8e9442a6 63 SMART SM00530 3 59 4.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c04140 07d08862da417c7b616724cc8e9442a6 63 SUPERFAMILY SSF47413 2 61 3.94E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c04140 07d08862da417c7b616724cc8e9442a6 63 Pfam PF01381 Helix-turn-helix 6 58 7.5E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 Gene3D G3DSA:1.20.1250.20 255 481 1.1E-22 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 Gene3D G3DSA:1.20.1720.10 8 241 7.3E-53 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 ProSitePatterns PS00217 Sugar transport proteins signature 2. 359 384 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 SUPERFAMILY SSF103473 1 479 2.88E-73 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 2.2E-8 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 11 35 2.2E-8 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 2.2E-8 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 393 412 2.2E-8 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 196 214 2.2E-8 T 12-10-2018 CLSA_c18110 508eeb213e0c2cfe92858cd22296442d 487 Pfam PF07690 Major Facilitator Superfamily 13 402 3.0E-57 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c25890 ab607fb7602a0a9b35f9a097129ca634 430 Pfam PF00860 Permease family 16 386 3.2E-41 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CLSA_c40970 4c862b1ab4178913ce56a1161e881d9b 110 SUPERFAMILY SSF89360 2 91 7.46E-12 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CLSA_c40970 4c862b1ab4178913ce56a1161e881d9b 110 TIGRFAM TIGR01911 HesB_rel_seleno: HesB-like selenoprotein 1 91 2.2E-30 T 12-10-2018 IPR010965 HesB-related, selonoprotein CLSA_c40970 4c862b1ab4178913ce56a1161e881d9b 110 Gene3D G3DSA:2.60.300.12 2 93 6.9E-6 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CLSA_c13850 988d5f97442b6d92655aaeda7f9fee91 333 Gene3D G3DSA:3.40.50.10950 10 329 1.4E-144 T 12-10-2018 CLSA_c13850 988d5f97442b6d92655aaeda7f9fee91 333 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 326 6.5E-137 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLSA_c13850 988d5f97442b6d92655aaeda7f9fee91 333 SUPERFAMILY SSF53659 1 330 4.52E-102 T 12-10-2018 CLSA_c13850 988d5f97442b6d92655aaeda7f9fee91 333 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 326 2.2E-126 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLSA_c13850 988d5f97442b6d92655aaeda7f9fee91 333 Gene3D G3DSA:3.40.50.10750 142 302 1.4E-144 T 12-10-2018 CLSA_c13850 988d5f97442b6d92655aaeda7f9fee91 333 PIRSF PIRSF000428 1 333 4.3E-115 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Pfam PF00874 PRD domain 484 566 1.7E-11 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Pfam PF00874 PRD domain 848 930 1.1E-6 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Pfam PF03610 PTS system fructose IIA component 577 676 5.5E-16 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Gene3D G3DSA:3.40.50.510 572 708 1.6E-37 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Gene3D G3DSA:1.10.1790.10 471 569 1.3E-10 T 12-10-2018 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 207 222 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 SUPERFAMILY SSF63520 837 929 2.09E-10 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 SUPERFAMILY SSF53062 575 691 4.32E-20 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 SMART SM00382 134 285 2.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 SUPERFAMILY SSF52540 111 352 1.36E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Pfam PF00158 Sigma-54 interaction domain 111 277 2.6E-46 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 SUPERFAMILY SSF63520 465 569 4.45E-14 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c20630 15626fd5f3ea31ef6e08075446e6ef7e 931 Gene3D G3DSA:3.40.50.300 99 287 1.6E-39 T 12-10-2018 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 651 762 4.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SUPERFAMILY SSF47384 525 607 2.75E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Pfam PF00512 His Kinase A (phospho-acceptor) domain 539 606 1.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Pfam PF00072 Response regulator receiver domain 954 1065 5.8E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Pfam PF00072 Response regulator receiver domain 807 916 1.9E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SUPERFAMILY SSF52172 950 1070 2.28E-39 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Pfam PF13185 GAF domain 284 416 1.3E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SMART SM00388 538 606 1.0E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SUPERFAMILY SSF52172 803 932 3.42E-17 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Gene3D G3DSA:3.40.50.12740 951 1072 2.8E-44 T 12-10-2018 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Gene3D G3DSA:3.30.565.10 608 770 9.6E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SMART SM00065 284 428 0.0027 T 12-10-2018 IPR003018 GAF domain GO:0005515 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 169 1.6E-13 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 725 743 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 718 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 762 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 704 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SUPERFAMILY SSF55874 595 766 9.43E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Gene3D G3DSA:3.40.50.2300 796 934 1.7E-19 T 12-10-2018 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SUPERFAMILY SSF55781 249 417 2.58E-22 T 12-10-2018 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Gene3D G3DSA:1.10.287.130 522 607 1.3E-24 T 12-10-2018 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SMART SM00448 804 920 3.1E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SMART SM00448 952 1065 4.3E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 SMART SM00387 651 765 1.1E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Gene3D G3DSA:1.20.1480.50 174 263 4.5E-7 T 12-10-2018 CLSA_c21910 93e56b8050f48216b62bcf9b6e1264f6 1072 Gene3D G3DSA:3.30.450.40 264 421 6.8E-17 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c15090 885a6c5cbd32a7e14c7b7e878cd3a1a4 207 Pfam PF06445 GyrI-like small molecule binding domain 18 202 1.4E-25 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain CLSA_c15090 885a6c5cbd32a7e14c7b7e878cd3a1a4 207 PIRSF PIRSF031644 1 206 8.2E-82 T 12-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 CLSA_c15090 885a6c5cbd32a7e14c7b7e878cd3a1a4 207 SUPERFAMILY SSF55136 129 197 6.28E-8 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c15090 885a6c5cbd32a7e14c7b7e878cd3a1a4 207 Gene3D G3DSA:3.20.80.10 1 204 2.4E-83 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 96 102 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Gene3D G3DSA:3.30.1370.100 584 681 2.5E-56 T 12-10-2018 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Gene3D G3DSA:2.30.42.20 543 726 2.5E-56 T 12-10-2018 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Gene3D G3DSA:3.30.565.10 5 215 3.4E-65 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 328 9.1E-34 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 SUPERFAMILY SSF55874 5 217 3.54E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 SUPERFAMILY SSF54211 193 329 2.77E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 129 2.2E-13 T 12-10-2018 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 SMART SM01340 211 329 4.8E-47 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 SMART SM00853 542 684 5.0E-46 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 4 724 26.169 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Pfam PF08676 MutL C terminal dimerisation domain 542 684 7.9E-39 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 SUPERFAMILY SSF118116 537 726 1.2E-50 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 308 4.8E-94 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c22500 1ffc024f2059c76643f6995cf7dd004e 728 Gene3D G3DSA:3.30.230.10 216 328 2.3E-30 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c26460 b8a7d104ad562e7005f57c4e418da21e 160 Gene3D G3DSA:3.30.70.640 2 160 5.6E-67 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26460 b8a7d104ad562e7005f57c4e418da21e 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 6 153 8.7E-59 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26460 b8a7d104ad562e7005f57c4e418da21e 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 159 34.716 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26460 b8a7d104ad562e7005f57c4e418da21e 160 Pfam PF01967 MoaC family 16 151 3.5E-55 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26460 b8a7d104ad562e7005f57c4e418da21e 160 SUPERFAMILY SSF55040 12 156 2.48E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c32810 fe7fc283994e6108d4209117897fccee 89 Pfam PF07875 Coat F domain 8 70 5.9E-21 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:2.180.10.10 1974 2082 2.2E-5 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:2.180.10.10 2083 2340 9.3E-28 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Pfam PF05954 Phage late control gene D protein (GPD) 24 127 5.4E-8 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1483 1514 0.0025 T 12-10-2018 IPR006530 YD repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1713 1754 5.3E-7 T 12-10-2018 IPR006530 YD repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1755 1795 3.9E-5 T 12-10-2018 IPR006530 YD repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 888 919 1.2E-4 T 12-10-2018 IPR006530 YD repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:3.55.50.10 59 124 3.6E-8 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 SUPERFAMILY SSF69279 18 146 2.55E-18 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:2.30.110.50 24 58 3.6E-8 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2266 2340 9.2E-23 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Pfam PF05593 RHS Repeat 1735 1771 6.8E-7 T 12-10-2018 IPR031325 RHS repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Pfam PF05593 RHS Repeat 1010 1042 8.5E-5 T 12-10-2018 IPR031325 RHS repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Pfam PF05593 RHS Repeat 1713 1749 1.2E-7 T 12-10-2018 IPR031325 RHS repeat CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:3.90.930.1 950 1113 4.3E-10 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:3.90.930.1 1564 1704 1.2E-6 T 12-10-2018 CLSA_c07870 8e2a880ce882a841376fff1604aa8133 2563 Gene3D G3DSA:3.90.930.1 1705 1838 1.3E-9 T 12-10-2018 CLSA_c07660 7d5d689da4f8a062b2d39502aaf64ec5 188 SUPERFAMILY SSF53056 4 181 5.1E-39 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CLSA_c07660 7d5d689da4f8a062b2d39502aaf64ec5 188 SMART SM00947 26 182 1.7E-35 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLSA_c07660 7d5d689da4f8a062b2d39502aaf64ec5 188 Pfam PF00484 Carbonic anhydrase 34 178 1.9E-15 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLSA_c07660 7d5d689da4f8a062b2d39502aaf64ec5 188 Gene3D G3DSA:3.40.1050.10 3 183 8.8E-47 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 Gene3D G3DSA:3.30.565.10 359 508 2.0E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 1.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 1.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 1.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 505 1.7E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 Gene3D G3DSA:3.30.450.20 163 273 6.2E-7 T 12-10-2018 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 SUPERFAMILY SSF55874 360 504 8.64E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 Pfam PF16927 N-terminal 7TM region of histidine kinase 1 162 9.2E-43 T 12-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 SMART SM00387 396 508 4.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 344 1.5E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 Gene3D G3DSA:1.10.287.130 274 351 1.2E-10 T 12-10-2018 CLSA_c40950 c444619c41dc106b92c06b376689f5d7 510 SUPERFAMILY SSF47384 273 345 4.9E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c03480 88734a8a4bb778825530662a2616596f 262 SUPERFAMILY SSF52402 1 257 3.84E-72 T 12-10-2018 CLSA_c03480 88734a8a4bb778825530662a2616596f 262 Gene3D G3DSA:3.40.50.620 1 261 6.2E-82 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c03480 88734a8a4bb778825530662a2616596f 262 Pfam PF01012 Electron transfer flavoprotein domain 22 196 1.1E-42 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03480 88734a8a4bb778825530662a2616596f 262 SMART SM00893 22 213 2.6E-51 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03480 88734a8a4bb778825530662a2616596f 262 PIRSF PIRSF000090 1 262 6.1E-82 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CLSA_c09250 f7f371e0bf519ea32a14dc911df706a7 269 Gene3D G3DSA:1.10.1660.10 2 132 1.3E-24 T 12-10-2018 CLSA_c09250 f7f371e0bf519ea32a14dc911df706a7 269 Pfam PF13411 MerR HTH family regulatory protein 5 74 1.0E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c09250 f7f371e0bf519ea32a14dc911df706a7 269 SUPERFAMILY SSF55136 192 258 2.46E-6 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c09250 f7f371e0bf519ea32a14dc911df706a7 269 SMART SM00422 5 75 1.6E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c09250 f7f371e0bf519ea32a14dc911df706a7 269 SUPERFAMILY SSF46955 3 109 2.56E-24 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 Pfam PF00072 Response regulator receiver domain 6 115 6.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 SMART SM00448 4 114 6.1E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 Gene3D G3DSA:1.10.10.10 132 228 6.5E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 SMART SM00862 153 227 3.2E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 Gene3D G3DSA:3.40.50.2300 1 131 4.4E-38 T 12-10-2018 CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 SUPERFAMILY SSF46894 139 227 4.82E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 2.4E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c33690 6d260c0ecf93aafac8c97fbb3aae2b38 228 SUPERFAMILY SSF52172 2 127 4.98E-41 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 SUPERFAMILY SSF46785 2 61 4.26E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 Gene3D G3DSA:3.30.70.920 52 138 1.1E-15 T 12-10-2018 CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 Gene3D G3DSA:1.10.10.10 1 51 1.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 Pfam PF01037 Lrp/AsnC ligand binding domain 72 121 2.5E-8 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 Pfam PF13404 AsnC-type helix-turn-helix domain 3 43 4.7E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 SMART SM00344 2 108 7.6E-25 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 SUPERFAMILY SSF54909 63 137 1.13E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.6E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.6E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c35930 d80970bfe90aa8661ae582fcb9d0b551 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.6E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 Pfam PF00082 Subtilase family 22 261 5.2E-31 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 PRINTS PR00723 Subtilisin serine protease family (S8) signature 22 41 1.6E-10 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 PRINTS PR00723 Subtilisin serine protease family (S8) signature 58 71 1.6E-10 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 PRINTS PR00723 Subtilisin serine protease family (S8) signature 210 226 1.6E-10 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 62 72 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 Gene3D G3DSA:3.40.50.200 4 268 1.9E-62 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 SUPERFAMILY SSF49373 294 359 1.61E-8 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 Gene3D G3DSA:2.60.40.1080 285 360 9.0E-9 T 12-10-2018 CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 Gene3D G3DSA:3.40.50.200 375 644 3.0E-22 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 SUPERFAMILY SSF52743 379 642 4.45E-21 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c28380 624bc1a3b3223c810e9a38718bc8cfb5 646 SUPERFAMILY SSF52743 7 266 1.57E-63 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c15350 7a047738ac3f27c11cad22d55289f0f8 89 Gene3D G3DSA:3.30.70.260 1 89 5.1E-25 T 12-10-2018 CLSA_c15350 7a047738ac3f27c11cad22d55289f0f8 89 SUPERFAMILY SSF55021 1 83 1.09E-19 T 12-10-2018 CLSA_c15350 7a047738ac3f27c11cad22d55289f0f8 89 Hamap MF_01054 UPF0237 protein . 1 89 25.23 T 12-10-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type CLSA_c15350 7a047738ac3f27c11cad22d55289f0f8 89 Pfam PF13740 ACT domain 4 77 7.6E-12 T 12-10-2018 CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 Gene3D G3DSA:1.10.10.10 130 232 2.8E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 SMART SM00448 3 113 9.9E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 Pfam PF00072 Response regulator receiver domain 5 113 1.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 Gene3D G3DSA:3.40.50.2300 1 129 2.8E-35 T 12-10-2018 CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 SUPERFAMILY SSF52172 4 188 8.25E-38 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 8.6E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c06240 d9d01134ee5117aff60c5321a22b61ae 232 SMART SM00862 152 228 9.4E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 SMART SM00342 21 103 1.1E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 Pfam PF06445 GyrI-like small molecule binding domain 127 283 4.7E-23 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 Gene3D G3DSA:1.10.10.60 55 107 3.6E-10 T 12-10-2018 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 99 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 SUPERFAMILY SSF55136 127 284 8.89E-22 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 Gene3D G3DSA:1.10.10.60 3 54 1.9E-16 T 12-10-2018 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 SUPERFAMILY SSF46689 5 55 1.03E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 Pfam PF12833 Helix-turn-helix domain 28 104 6.2E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 SMART SM00871 127 283 8.3E-29 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 SUPERFAMILY SSF46689 57 112 1.66E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 9.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 9.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c10040 9e8829fe2a632cb5a0b7426680688e7d 284 Gene3D G3DSA:3.20.80.10 127 284 1.8E-43 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c12060 d8fefca71d03909345b96897c45b5783 202 SMART SM00903 10 157 8.5E-24 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c12060 d8fefca71d03909345b96897c45b5783 202 Pfam PF01613 Flavin reductase like domain 14 158 1.5E-28 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c12060 d8fefca71d03909345b96897c45b5783 202 SUPERFAMILY SSF50475 10 175 5.4E-49 T 12-10-2018 CLSA_c12060 d8fefca71d03909345b96897c45b5783 202 Gene3D G3DSA:2.30.110.10 1 199 2.5E-62 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 SMART SM00448 22 132 3.5E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 SUPERFAMILY SSF46894 145 242 9.59E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 Gene3D G3DSA:3.40.50.2300 15 148 1.5E-37 T 12-10-2018 CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 Gene3D G3DSA:1.10.10.10 149 247 3.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 241 3.7E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 SUPERFAMILY SSF52172 16 142 1.99E-39 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 Pfam PF00072 Response regulator receiver domain 24 133 1.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36050 ee04394f9a18b1811d209965d0288a9a 247 SMART SM00862 168 241 2.0E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 32 396 7.2E-96 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 Pfam PF01566 Natural resistance-associated macrophage protein 54 402 5.7E-121 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 15 428 36.126 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 PRINTS PR00447 Natural resistance-associated macrophage protein signature 141 160 3.8E-29 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 PRINTS PR00447 Natural resistance-associated macrophage protein signature 166 187 3.8E-29 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 PRINTS PR00447 Natural resistance-associated macrophage protein signature 216 239 3.8E-29 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 PRINTS PR00447 Natural resistance-associated macrophage protein signature 113 139 3.8E-29 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c33170 465cb76274a8177cb17592313906b21e 432 PRINTS PR00447 Natural resistance-associated macrophage protein signature 318 337 3.8E-29 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 SUPERFAMILY SSF50800 70 167 3.31E-28 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 SUPERFAMILY SSF52935 323 472 1.96E-41 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 Gene3D G3DSA:3.40.1380.20 336 468 6.5E-188 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 3.7E-184 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 Pfam PF02887 Pyruvate kinase, alpha/beta domain 359 469 5.9E-37 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 SUPERFAMILY SSF51621 1 342 2.51E-99 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.2E-77 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 3.3E-145 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 Gene3D G3DSA:2.40.33.10 70 168 6.5E-188 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c42900 301c32ae86587e2bdfb7c3d18873b714 473 Gene3D G3DSA:3.20.20.60 2 335 6.5E-188 T 12-10-2018 CLSA_c17420 874a4ca703922d1dca2e8fae3ff8231c 209 Gene3D G3DSA:3.40.50.300 1 192 7.9E-23 T 12-10-2018 CLSA_c17420 874a4ca703922d1dca2e8fae3ff8231c 209 SUPERFAMILY SSF52540 2 187 6.33E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17420 874a4ca703922d1dca2e8fae3ff8231c 209 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 174 2.5E-12 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 164 247 1.7E-7 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 SUPERFAMILY SSF52954 359 461 1.96E-35 T 12-10-2018 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 462 51.673 T 12-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 245 1.2E-92 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 SUPERFAMILY SSF55681 6 375 3.45E-127 T 12-10-2018 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 Pfam PF03129 Anticodon binding domain 372 459 7.0E-25 T 12-10-2018 IPR004154 Anticodon-binding CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 Gene3D G3DSA:3.40.50.800 368 461 4.7E-34 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 203 220 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 171 188 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 327 339 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 407 426 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 220 230 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c01470 3a2e260b405aaab53319846dd3aa3fbf 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 150 162 4.5E-54 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 SUPERFAMILY SSF56014 86 219 2.22E-44 T 12-10-2018 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 Gene3D G3DSA:3.90.480.20 4 79 6.8E-8 T 12-10-2018 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 86 219 6.6E-31 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 PIRSF PIRSF037487 1 220 4.5E-108 T 12-10-2018 IPR017220 Sulphite reductase, assimilatory CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 SUPERFAMILY SSF55124 9 75 6.69E-16 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 131 147 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 Gene3D G3DSA:3.30.413.10 83 223 1.5E-39 T 12-10-2018 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 PRINTS PR00397 Sirohaem Fe-binding site signature 131 149 7.5E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 PRINTS PR00397 Sirohaem Fe-binding site signature 88 106 7.5E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c19130 0f987f35738bc89164a8c7c14992630d 224 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 13 75 3.4E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 Hamap MF_00494 Probable transaldolase [tal]. 1 214 46.308 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 SUPERFAMILY SSF51569 1 213 7.01E-78 T 12-10-2018 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 6.0E-56 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 Gene3D G3DSA:3.20.20.70 1 215 5.2E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c38350 735004c4e5df2af0feea33d69d54623a 215 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 2.9E-98 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLSA_c38730 16bb35d5a9da535d47b770a6007ddc99 389 Gene3D G3DSA:3.40.640.10 60 283 8.3E-128 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c38730 16bb35d5a9da535d47b770a6007ddc99 389 Gene3D G3DSA:3.90.1150.10 31 380 8.3E-128 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c38730 16bb35d5a9da535d47b770a6007ddc99 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLSA_c38730 16bb35d5a9da535d47b770a6007ddc99 389 Pfam PF00155 Aminotransferase class I and II 31 380 7.5E-71 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c38730 16bb35d5a9da535d47b770a6007ddc99 389 SUPERFAMILY SSF53383 6 386 3.59E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 Gene3D G3DSA:1.10.3860.10 1 416 6.5E-134 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 2.8E-36 T 12-10-2018 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 SUPERFAMILY SSF118215 6 402 1.83E-125 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CLSA_c10010 1de7953781df4f6fce4b330437af76e2 421 Pfam PF00375 Sodium:dicarboxylate symporter family 6 401 8.0E-121 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLSA_c36200 d9731cc684fe5039f214da2ac10a13ac 58 Gene3D G3DSA:3.30.70.20 4 58 1.4E-11 T 12-10-2018 CLSA_c36200 d9731cc684fe5039f214da2ac10a13ac 58 Pfam PF13187 4Fe-4S dicluster domain 9 55 9.1E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c36200 d9731cc684fe5039f214da2ac10a13ac 58 SUPERFAMILY SSF54862 4 57 1.12E-13 T 12-10-2018 CLSA_c36200 d9731cc684fe5039f214da2ac10a13ac 58 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 Pfam PF04055 Radical SAM superfamily 104 247 3.5E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 104 115 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 SUPERFAMILY SSF102114 93 431 3.01E-41 T 12-10-2018 CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 TIGRFAM TIGR04068 rSAM_ocin_clost: Cys-rich peptide radical SAM maturase CcpM 8 476 2.7E-157 T 12-10-2018 IPR024001 Cysteine-rich peptide, radical SAM maturase, CcpM CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 Gene3D G3DSA:3.20.20.70 95 471 5.9E-71 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 366 447 2.2E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c37100 73e68f0534c7f9999063b4ddebd33550 481 Pfam PF13353 4Fe-4S single cluster domain 105 225 6.3E-11 T 12-10-2018 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Gene3D G3DSA:3.90.1640.10 269 426 3.1E-47 T 12-10-2018 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 SUPERFAMILY SSF64182 4 543 6.38E-71 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 SUPERFAMILY SSF54631 68 300 9.03E-25 T 12-10-2018 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Gene3D G3DSA:3.40.1390.20 130 245 1.3E-39 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Pfam PF01368 DHH family 5 382 4.0E-27 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Gene3D G3DSA:3.90.1640.10 3 86 3.7E-21 T 12-10-2018 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Pfam PF07085 DRTGG domain 142 244 7.5E-22 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 SMART SM00116 256 304 3.1E-6 T 12-10-2018 IPR000644 CBS domain CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 SMART SM00116 77 125 0.12 T 12-10-2018 IPR000644 CBS domain CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 SMART SM01131 418 544 2.7E-59 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Gene3D G3DSA:3.10.310.20 427 548 2.3E-40 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Pfam PF02833 DHHA2 domain 419 542 1.1E-21 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 SUPERFAMILY SSF75138 137 252 2.09E-26 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Pfam PF00571 CBS domain 253 301 4.1E-7 T 12-10-2018 IPR000644 CBS domain CLSA_c39120 82423ce3fbec4a5f663a266e491de030 548 Pfam PF00571 CBS domain 77 124 2.1E-7 T 12-10-2018 IPR000644 CBS domain CLSA_c04990 74c256e0508b0237beefcb0f79a992f3 194 SUPERFAMILY SSF52540 1 143 7.1E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c04990 74c256e0508b0237beefcb0f79a992f3 194 Pfam PF00265 Thymidine kinase 3 188 8.0E-41 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CLSA_c04990 74c256e0508b0237beefcb0f79a992f3 194 Gene3D G3DSA:3.40.50.300 1 142 2.1E-28 T 12-10-2018 CLSA_c04990 74c256e0508b0237beefcb0f79a992f3 194 SUPERFAMILY SSF57716 143 191 4.75E-9 T 12-10-2018 CLSA_c04990 74c256e0508b0237beefcb0f79a992f3 194 PIRSF PIRSF035805 1 194 5.7E-55 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CLSA_c04990 74c256e0508b0237beefcb0f79a992f3 194 Hamap MF_00124 Thymidine kinase [tdk]. 1 191 28.209 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CLSA_c30620 47725eb0de31dd5077941c8600bf120c 480 Gene3D G3DSA:1.20.1740.10 21 472 3.6E-135 T 12-10-2018 CLSA_c30620 47725eb0de31dd5077941c8600bf120c 480 Pfam PF13520 Amino acid permease 27 428 2.9E-55 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c30620 47725eb0de31dd5077941c8600bf120c 480 PIRSF PIRSF006060 10 473 4.8E-96 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c13400 87aaca4d6176591414c5827030687206 388 Gene3D G3DSA:3.40.50.1440 16 232 8.6E-80 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 Gene3D G3DSA:3.30.1330.20 234 348 9.6E-37 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 SUPERFAMILY SSF55307 218 331 8.24E-40 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 ProSitePatterns PS01135 FtsZ protein signature 2. 110 131 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CLSA_c13400 87aaca4d6176591414c5827030687206 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 26 186 7.0E-43 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 ProSitePatterns PS01134 FtsZ protein signature 1. 57 91 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CLSA_c13400 87aaca4d6176591414c5827030687206 388 Pfam PF12327 FtsZ family, C-terminal domain 235 329 1.1E-31 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal CLSA_c13400 87aaca4d6176591414c5827030687206 388 SMART SM00865 220 337 1.7E-49 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 PRINTS PR00423 Cell division protein FtsZ signature 139 160 2.4E-47 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 PRINTS PR00423 Cell division protein FtsZ signature 111 131 2.4E-47 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 PRINTS PR00423 Cell division protein FtsZ signature 202 224 2.4E-47 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 PRINTS PR00423 Cell division protein FtsZ signature 225 246 2.4E-47 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 SUPERFAMILY SSF52490 26 221 1.44E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 SMART SM00864 26 218 3.3E-114 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLSA_c13400 87aaca4d6176591414c5827030687206 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 22 348 4.8E-126 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CLSA_c13400 87aaca4d6176591414c5827030687206 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 22 377 37.204 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CLSA_c16460 19dfff376de031d406d583f0b73e81e6 233 Pfam PF12706 Beta-lactamase superfamily domain 35 136 5.8E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c16460 19dfff376de031d406d583f0b73e81e6 233 SUPERFAMILY SSF56281 2 228 1.82E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c16460 19dfff376de031d406d583f0b73e81e6 233 SMART SM00849 23 212 8.4E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c16460 19dfff376de031d406d583f0b73e81e6 233 Gene3D G3DSA:3.60.15.10 2 230 3.3E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 SMART SM00893 3 179 2.0E-21 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 Pfam PF01012 Electron transfer flavoprotein domain 4 161 2.0E-25 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 SUPERFAMILY SSF52402 1 178 6.63E-32 T 12-10-2018 CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 Gene3D G3DSA:3.40.50.1220 181 312 9.5E-56 T 12-10-2018 CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 PIRSF PIRSF000089 1 311 6.3E-94 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 186 269 2.8E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 SUPERFAMILY SSF52467 186 305 2.18E-46 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c19050 c746636e471fd534841b6412efd7ed72 312 Gene3D G3DSA:3.40.50.620 2 178 1.6E-32 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 SUPERFAMILY SSF47384 350 433 7.85E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 Gene3D G3DSA:3.30.565.10 436 598 6.7E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 Pfam PF13426 PAS domain 231 335 8.5E-8 T 12-10-2018 IPR000014 PAS domain CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 SUPERFAMILY SSF55785 216 334 1.31E-13 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 SMART SM00388 362 434 1.6E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 Gene3D G3DSA:3.30.450.20 224 346 2.2E-14 T 12-10-2018 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 433 1.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 SMART SM00387 480 592 1.4E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 219 341 9.0E-14 T 12-10-2018 IPR000014 PAS domain CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 SUPERFAMILY SSF55874 423 593 1.44E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 Gene3D G3DSA:1.10.287.130 347 435 2.7E-22 T 12-10-2018 CLSA_c25730 ea391b35366c0275f8cfd7b21574e8be 623 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 589 1.7E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 SUPERFAMILY SSF53790 4 221 1.83E-84 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 PIRSF PIRSF005917 1 281 1.0E-105 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 Gene3D G3DSA:3.30.950.10 113 228 2.0E-39 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 223 38.49 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 278 1.3E-86 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 Gene3D G3DSA:3.40.1010.10 1 112 2.0E-46 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c43330 95158961f1ccc34bc1c4148831dbbed8 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 1.2E-34 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c02410 c2bebead6cee3e9dc103eab005f0a57a 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 13 174 1.8E-54 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLSA_c02410 c2bebead6cee3e9dc103eab005f0a57a 185 Pfam PF05683 Fumarase C-terminus 2 174 1.5E-61 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLSA_c02410 c2bebead6cee3e9dc103eab005f0a57a 185 Gene3D G3DSA:3.20.130.10 1 174 3.4E-71 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CLSA_c02410 c2bebead6cee3e9dc103eab005f0a57a 185 SUPERFAMILY SSF117457 3 174 2.22E-63 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 Hamap MF_01469 Ribonuclease M5 [rnmV]. 2 175 29.351 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 SUPERFAMILY SSF110455 2 114 2.88E-32 T 12-10-2018 CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 Pfam PF01751 Toprim domain 4 80 4.4E-8 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 Gene3D G3DSA:3.40.1360.20 1 121 2.5E-23 T 12-10-2018 CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 173 2.0E-43 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 Pfam PF13331 Domain of unknown function (DUF4093) 89 173 1.7E-23 T 12-10-2018 IPR025156 Ribonuclease M5, C-terminal domain CLSA_c00760 dfe7117bb73b69753896b85e100ea3ce 185 SMART SM00493 3 76 2.0E-11 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 Gene3D G3DSA:3.40.50.920 179 308 5.8E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 SUPERFAMILY SSF52518 3 168 1.35E-56 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 SUPERFAMILY SSF52922 173 307 3.8E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 Gene3D G3DSA:3.40.50.970 2 178 7.2E-64 T 12-10-2018 CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 SMART SM00861 3 169 1.7E-56 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 Pfam PF02779 Transketolase, pyrimidine binding domain 4 166 1.4E-37 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c38360 86e3bbe8abe85981a62286dea5c9402e 308 Pfam PF02780 Transketolase, C-terminal domain 179 299 5.2E-32 T 12-10-2018 IPR033248 Transketolase, C-terminal domain CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 Pfam PF07993 Male sterility protein 148 391 1.0E-51 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 SUPERFAMILY SSF47336 29 97 6.02E-13 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 Gene3D G3DSA:1.10.1200.10 24 106 6.9E-16 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 Gene3D G3DSA:3.40.50.720 113 508 4.7E-85 T 12-10-2018 CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 Pfam PF00550 Phosphopantetheine attachment site 39 98 5.2E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 SUPERFAMILY SSF51735 144 451 9.18E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c09970 a7efadcfda0584c64877e3df2b24a46e 512 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 145 506 1.3E-68 T 12-10-2018 IPR010080 Thioester reductase-like domain CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 Gene3D G3DSA:3.40.109.10 60 269 6.4E-37 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 Pfam PF00881 Nitroreductase family 82 253 4.3E-29 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 Pfam PF13187 4Fe-4S dicluster domain 8 53 2.6E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 Gene3D G3DSA:3.30.70.20 1 59 2.4E-14 T 12-10-2018 CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 SUPERFAMILY SSF54862 1 66 2.96E-20 T 12-10-2018 CLSA_c34170 1cef20f400d9bfdbc0b48f6f0c22d9bd 272 SUPERFAMILY SSF55469 77 266 4.71E-30 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c11760 0fd4d9be1705c3398d4b79b63c5d1587 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 188 7.6E-47 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CLSA_c11760 0fd4d9be1705c3398d4b79b63c5d1587 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 198 24.616 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CLSA_c11760 0fd4d9be1705c3398d4b79b63c5d1587 199 Pfam PF01121 Dephospho-CoA kinase 5 181 2.9E-48 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CLSA_c11760 0fd4d9be1705c3398d4b79b63c5d1587 199 SUPERFAMILY SSF52540 1 194 3.2E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11760 0fd4d9be1705c3398d4b79b63c5d1587 199 Gene3D G3DSA:3.40.50.300 1 197 1.9E-61 T 12-10-2018 CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.7E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 SMART SM00862 145 222 1.6E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 Gene3D G3DSA:1.10.10.10 124 226 2.5E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 Pfam PF00072 Response regulator receiver domain 4 112 3.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 Gene3D G3DSA:3.40.50.2300 2 123 6.8E-32 T 12-10-2018 CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 SUPERFAMILY SSF52172 1 173 4.05E-37 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20140 757ec976b2f60f2a9a8c05b9815777f2 226 SMART SM00448 2 112 2.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 SUPERFAMILY SSF53613 13 273 1.05E-58 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 Gene3D G3DSA:3.40.1190.20 2 274 6.9E-100 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 15 268 33.418 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 13 267 9.5E-86 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 Pfam PF02110 Hydroxyethylthiazole kinase family 13 265 1.3E-81 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PIRSF PIRSF000513 8 274 4.2E-90 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 34 55 9.0E-37 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 171 188 9.0E-37 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 21 28 9.0E-37 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 91 108 9.0E-37 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 65 73 9.0E-37 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07370 eee357ce23745c5a8977540a3ce31e9b 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 122 136 9.0E-37 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c44670 dc851551b11e94443029fca8de604faa 179 SUPERFAMILY SSF49764 65 151 1.19E-5 T 12-10-2018 IPR008978 HSP20-like chaperone CLSA_c44670 dc851551b11e94443029fca8de604faa 179 Pfam PF00011 Hsp20/alpha crystallin family 66 163 1.1E-6 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain CLSA_c44670 dc851551b11e94443029fca8de604faa 179 Gene3D G3DSA:2.60.40.790 51 156 2.5E-9 T 12-10-2018 IPR008978 HSP20-like chaperone CLSA_c10960 0503abbefa2cedaaca671b72bb5b39c8 376 Pfam PF06898 Putative stage IV sporulation protein YqfD 7 371 1.9E-101 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD CLSA_c10960 0503abbefa2cedaaca671b72bb5b39c8 376 PIRSF PIRSF029895 1 376 2.2E-67 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD CLSA_c10960 0503abbefa2cedaaca671b72bb5b39c8 376 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 4 372 5.6E-109 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD CLSA_c02360 7605a42547515d7996c0af12511238e3 244 Gene3D G3DSA:3.30.70.660 106 242 2.3E-45 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 Pfam PF01416 tRNA pseudouridine synthase 143 244 3.2E-26 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 Pfam PF01416 tRNA pseudouridine synthase 7 104 6.2E-11 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 Gene3D G3DSA:3.30.70.580 1 105 5.1E-34 T 12-10-2018 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 239 5.6E-58 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 34.564 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 SUPERFAMILY SSF55120 1 244 1.4E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c02360 7605a42547515d7996c0af12511238e3 244 PIRSF PIRSF001430 1 244 8.9E-78 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 SMART SM00388 130 197 8.1E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 SUPERFAMILY SSF47384 114 196 2.16E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 341 8.5E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 Gene3D G3DSA:3.30.565.10 201 356 3.5E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 3.8E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 308 3.8E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 3.8E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 SMART SM00387 243 354 7.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 194 1.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 SUPERFAMILY SSF55874 201 352 8.25E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 Gene3D G3DSA:1.10.287.130 72 193 9.2E-23 T 12-10-2018 CLSA_c16340 8a3625ce2cd376b317e7922739fc0c7a 356 SMART SM00304 70 122 0.0065 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c29940 268f2dd291767883feb70a446137fb41 212 Pfam PF14265 Domain of unknown function (DUF4355) 52 172 4.4E-30 T 12-10-2018 IPR025580 Protein of unknown function DUF4355 CLSA_c13280 9a94692e4e9145fe148d5f055fed3052 85 PIRSF PIRSF037258 1 85 1.3E-39 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 CLSA_c13280 9a94692e4e9145fe148d5f055fed3052 85 Hamap MF_01507 UPF0297 protein . 2 85 25.875 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 CLSA_c13280 9a94692e4e9145fe148d5f055fed3052 85 Pfam PF06135 Bacterial protein of unknown function (DUF965) 6 83 7.6E-37 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 417 5.0E-73 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 Gene3D G3DSA:1.20.1720.10 12 258 2.3E-32 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 SUPERFAMILY SSF103473 8 463 4.19E-58 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 2.5E-8 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 2.5E-8 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 2.5E-8 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 2.5E-8 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 2.5E-8 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 Gene3D G3DSA:1.20.1250.20 259 470 7.1E-21 T 12-10-2018 CLSA_c25680 36ac26ce1e7954c22a0984e0a76f4e47 473 Pfam PF07690 Major Facilitator Superfamily 16 405 4.1E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c42260 0b0a0dbc5fadce3ff0ce97f47b07f603 293 Pfam PF04321 RmlD substrate binding domain 1 291 2.6E-99 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CLSA_c42260 0b0a0dbc5fadce3ff0ce97f47b07f603 293 SUPERFAMILY SSF51735 1 290 4.67E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c42260 0b0a0dbc5fadce3ff0ce97f47b07f603 293 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 290 8.5E-94 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CLSA_c42260 0b0a0dbc5fadce3ff0ce97f47b07f603 293 Gene3D G3DSA:3.40.50.720 3 278 6.8E-107 T 12-10-2018 CLSA_c42260 0b0a0dbc5fadce3ff0ce97f47b07f603 293 Gene3D G3DSA:3.90.25.10 171 284 6.8E-107 T 12-10-2018 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 SUPERFAMILY SSF55681 119 421 7.11E-102 T 12-10-2018 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 42.472 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 SUPERFAMILY SSF46589 1 115 1.67E-30 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 Gene3D G3DSA:3.30.930.10 108 425 1.3E-125 T 12-10-2018 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 402 7.5E-35 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 5.3E-172 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 PIRSF PIRSF001529 1 425 1.6E-181 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 110 1.3E-32 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.5E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.5E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.5E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.5E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.5E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLSA_c00170 31f2a94500d920bb376829ecb9a4bb34 425 Gene3D G3DSA:1.10.287.40 1 107 3.1E-30 T 12-10-2018 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 SMART SM00448 1 112 6.1E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 Gene3D G3DSA:1.25.40.10 231 377 5.0E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 Pfam PF03704 Bacterial transcriptional activator domain 260 370 1.2E-4 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 Pfam PF00072 Response regulator receiver domain 3 110 6.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 SUPERFAMILY SSF52172 1 124 3.42E-28 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 216 8.8E-6 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 SUPERFAMILY SSF48452 273 371 4.36E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 Gene3D G3DSA:3.40.50.2300 1 128 4.5E-30 T 12-10-2018 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 SUPERFAMILY SSF46894 134 217 3.97E-10 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 Gene3D G3DSA:1.10.10.10 129 226 1.8E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c40940 23f89dc2a51a6bec00119631aea5bfbb 377 SMART SM01043 231 370 0.0013 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 SMART SM00388 81 158 5.7E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 SMART SM00387 204 316 5.0E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 7.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 241 255 7.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 259 269 7.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 7.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 SUPERFAMILY SSF47384 66 159 6.08E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 Gene3D G3DSA:1.10.287.130 21 154 2.4E-17 T 12-10-2018 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 Gene3D G3DSA:3.30.565.10 160 315 3.4E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 SUPERFAMILY SSF55874 148 314 3.8E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 Pfam PF00512 His Kinase A (phospho-acceptor) domain 81 157 8.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c40820 95c4b1327578a5a82bb1139c33fbe407 316 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 204 314 1.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 Gene3D G3DSA:1.10.287.950 256 573 4.9E-51 T 12-10-2018 CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 142 5.7E-25 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 SUPERFAMILY SSF58104 243 573 1.4E-52 T 12-10-2018 CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 SMART SM00283 290 573 8.9E-18 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 8.2E-14 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.2E-14 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 8.2E-14 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c18170 c3a0b112043241c8ef031bf4b14f33c0 575 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 507 2.7E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c01050 8962d42868e5b6bc6cb5397d9be7b818 91 Gene3D G3DSA:3.30.1120.40 1 91 1.7E-39 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 CLSA_c01050 8962d42868e5b6bc6cb5397d9be7b818 91 SUPERFAMILY SSF160537 1 86 9.94E-36 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 CLSA_c01050 8962d42868e5b6bc6cb5397d9be7b818 91 Pfam PF04026 SpoVG 1 82 7.1E-40 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 CLSA_c01050 8962d42868e5b6bc6cb5397d9be7b818 91 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 91 28.245 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 SUPERFAMILY SSF51215 26 165 2.88E-14 T 12-10-2018 IPR037923 Transcription regulator HTH-like CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 Gene3D G3DSA:1.10.10.60 235 288 9.6E-18 T 12-10-2018 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 Pfam PF02311 AraC-like ligand binding domain 31 160 8.2E-14 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 SUPERFAMILY SSF46689 185 235 2.06E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 Pfam PF12833 Helix-turn-helix domain 207 284 4.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 Gene3D G3DSA:1.10.10.60 186 234 4.1E-17 T 12-10-2018 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 SMART SM00342 201 284 2.5E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 Gene3D G3DSA:2.60.120.10 14 87 1.2E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c21720 544de25a4723442ba01070c19422f1b8 290 SUPERFAMILY SSF46689 237 285 5.73E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c30800 7fefec6a0817ddd2b5a06a0046638ac6 333 SUPERFAMILY SSF103486 6 329 4.05E-71 T 12-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30800 7fefec6a0817ddd2b5a06a0046638ac6 333 Gene3D G3DSA:1.20.1690.10 183 289 1.7E-54 T 12-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30800 7fefec6a0817ddd2b5a06a0046638ac6 333 Gene3D G3DSA:1.20.1690.10 81 182 1.7E-54 T 12-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30800 7fefec6a0817ddd2b5a06a0046638ac6 333 Gene3D G3DSA:1.10.132.50 12 319 1.7E-54 T 12-10-2018 CLSA_c30800 7fefec6a0817ddd2b5a06a0046638ac6 333 Pfam PF01992 ATP synthase (C/AC39) subunit 11 327 3.1E-67 T 12-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 2.0E-46 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 Gene3D G3DSA:1.20.140.10 235 379 8.6E-50 T 12-10-2018 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 PIRSF PIRSF016578 2 111 7.3E-4 T 12-10-2018 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 PIRSF PIRSF016578 234 368 1.1E-10 T 12-10-2018 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 PIRSF PIRSF016578 138 190 520.0 T 12-10-2018 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 SUPERFAMILY SSF56645 1 242 3.4E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 Gene3D G3DSA:1.10.540.10 1 119 2.2E-40 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 Gene3D G3DSA:2.40.110.10 121 234 4.1E-41 T 12-10-2018 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 9.5E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 SUPERFAMILY SSF47203 228 378 8.22E-54 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CLSA_c40890 630f150245c23089aa384bbcc187d72a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.8E-33 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 462 1.1E-250 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 Gene3D G3DSA:3.40.50.300 78 346 2.9E-117 T 12-10-2018 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 75 1.1E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 344 1.4E-68 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 SMART SM00382 144 407 3.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c05150 d01501752b768990575831e9fa962ac0 463 SUPERFAMILY SSF47917 347 462 1.86E-49 T 12-10-2018 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 SUPERFAMILY SSF52540 79 349 4.86E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05150 d01501752b768990575831e9fa962ac0 463 Gene3D G3DSA:2.40.10.170 2 77 1.9E-28 T 12-10-2018 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 462 58.016 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 Gene3D G3DSA:1.10.1140.10 347 463 1.3E-51 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c05150 d01501752b768990575831e9fa962ac0 463 SUPERFAMILY SSF50615 4 77 6.8E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CLSA_c08720 a053c2addf1e34b7542443b1a4bc678d 257 SUPERFAMILY SSF53448 5 241 3.76E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c08720 a053c2addf1e34b7542443b1a4bc678d 257 Gene3D G3DSA:3.90.550.10 6 244 3.8E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c08720 a053c2addf1e34b7542443b1a4bc678d 257 Pfam PF12804 MobA-like NTP transferase domain 7 106 5.5E-14 T 12-10-2018 IPR025877 MobA-like NTP transferase CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Gene3D G3DSA:2.10.270.10 211 314 1.4E-23 T 12-10-2018 CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 SUPERFAMILY SSF56281 321 588 1.19E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Gene3D G3DSA:2.10.270.10 114 210 1.3E-18 T 12-10-2018 CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Pfam PF00753 Metallo-beta-lactamase superfamily 331 521 2.1E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Pfam PF01473 Putative cell wall binding repeat 238 251 0.24 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Pfam PF01473 Putative cell wall binding repeat 214 232 1.2E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Pfam PF01473 Putative cell wall binding repeat 175 191 2.7E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Pfam PF01473 Putative cell wall binding repeat 194 212 0.002 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 SUPERFAMILY SSF69360 120 314 4.81E-47 T 12-10-2018 CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 SMART SM00849 332 567 1.5E-4 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c42500 dcbbbc4512156756e601890354241a6b 609 Gene3D G3DSA:3.60.15.10 320 608 2.4E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 Gene3D G3DSA:3.30.300.20 59 141 1.4E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 Pfam PF14804 Jag N-terminus 6 55 7.5E-20 T 12-10-2018 IPR032782 Jag, N-terminal CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 SUPERFAMILY SSF82708 159 203 7.85E-8 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 Gene3D G3DSA:3.30.30.80 1 57 7.0E-20 T 12-10-2018 IPR038247 Jag, N-terminal domain superfamily CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 Gene3D G3DSA:3.30.1370.50 142 209 1.2E-28 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 Pfam PF01424 R3H domain 145 204 1.1E-16 T 12-10-2018 IPR001374 R3H domain GO:0003676 CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 Pfam PF13083 KH domain 65 126 9.3E-17 T 12-10-2018 CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 SMART SM00393 127 206 5.9E-20 T 12-10-2018 IPR001374 R3H domain GO:0003676 CLSA_c45480 62cd965a78041ec174cfe4a95768546e 209 SMART SM01245 5 57 5.0E-21 T 12-10-2018 IPR032782 Jag, N-terminal CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 SUPERFAMILY SSF56024 38 173 5.1E-13 T 12-10-2018 CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 Pfam PF13091 PLD-like domain 46 171 1.1E-15 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 Gene3D G3DSA:3.40.50.300 217 401 4.4E-43 T 12-10-2018 CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 SMART SM00487 234 416 5.3E-11 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 Pfam PF00271 Helicase conserved C-terminal domain 459 563 3.0E-13 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 Gene3D G3DSA:3.40.50.300 404 585 1.4E-42 T 12-10-2018 CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 SUPERFAMILY SSF52540 283 579 8.32E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 Pfam PF04851 Type III restriction enzyme, res subunit 237 385 1.6E-30 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 Gene3D G3DSA:3.30.870.10 39 208 5.2E-35 T 12-10-2018 CLSA_c19230 a23f75495463ad8fb3f66cc987e7f8e6 847 SMART SM00490 480 564 2.2E-12 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c16510 a9994889db31bb8c1cc1b5b42de096cf 206 SUPERFAMILY SSF56784 3 191 7.2E-30 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c16510 a9994889db31bb8c1cc1b5b42de096cf 206 Gene3D G3DSA:3.40.50.1000 1 199 2.6E-31 T 12-10-2018 IPR023214 HAD superfamily CLSA_c16510 a9994889db31bb8c1cc1b5b42de096cf 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 181 4.0E-16 T 12-10-2018 CLSA_c16510 a9994889db31bb8c1cc1b5b42de096cf 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 6.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c16510 a9994889db31bb8c1cc1b5b42de096cf 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c16510 a9994889db31bb8c1cc1b5b42de096cf 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c25160 b5461a9034a255138f3308bad01e9376 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 2 65 2.8E-21 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis CLSA_c25160 b5461a9034a255138f3308bad01e9376 65 Gene3D G3DSA:3.10.20.30 1 65 5.1E-19 T 12-10-2018 IPR012675 Beta-grasp domain superfamily CLSA_c25160 b5461a9034a255138f3308bad01e9376 65 Pfam PF02597 ThiS family 13 65 1.7E-10 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CLSA_c25160 b5461a9034a255138f3308bad01e9376 65 SUPERFAMILY SSF54285 1 64 4.36E-17 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 342 3.1E-17 T 12-10-2018 CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 181 197 3.1E-17 T 12-10-2018 CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 3.1E-17 T 12-10-2018 CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 205 219 3.1E-17 T 12-10-2018 CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 483 7.0E-87 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 Pfam PF12161 HsdM N-terminal domain 9 143 1.6E-25 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 SUPERFAMILY SSF53335 7 503 5.22E-140 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 Gene3D G3DSA:1.20.1260.30 1 148 1.7E-30 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 Gene3D G3DSA:3.40.50.150 158 452 1.5E-103 T 12-10-2018 CLSA_c29380 34a2bea52019b7dd266ff79ff3050c82 505 Pfam PF02384 N-6 DNA Methylase 157 468 1.1E-110 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLSA_c02590 711f1e33708a186fc1a3b7df08fcb57f 157 Pfam PF01966 HD domain 34 133 3.1E-13 T 12-10-2018 IPR006674 HD domain CLSA_c02590 711f1e33708a186fc1a3b7df08fcb57f 157 SMART SM00471 29 143 3.6E-8 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c02590 711f1e33708a186fc1a3b7df08fcb57f 157 Gene3D G3DSA:1.10.3210.10 9 153 2.0E-26 T 12-10-2018 CLSA_c02590 711f1e33708a186fc1a3b7df08fcb57f 157 SUPERFAMILY SSF109604 1 156 5.39E-32 T 12-10-2018 CLSA_c02590 711f1e33708a186fc1a3b7df08fcb57f 157 TIGRFAM TIGR00277 HDIG: HDIG domain 34 96 1.8E-8 T 12-10-2018 IPR006675 HDIG domain CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 PIRSF PIRSF005261 1 292 5.5E-79 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 292 36.708 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 Gene3D G3DSA:3.90.1280.10 238 292 1.1E-21 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 Pfam PF01430 Hsp33 protein 3 281 1.0E-80 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 SUPERFAMILY SSF118352 234 291 1.96E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 Gene3D G3DSA:3.55.30.10 2 237 9.5E-80 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CLSA_c27470 9790a1f0c0e443a0937a1e36e75709aa 292 SUPERFAMILY SSF64397 3 242 8.37E-69 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 358 371 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 623 643 8.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 606 623 8.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 SMART SM00382 354 498 1.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Gene3D G3DSA:3.30.450.20 218 322 1.0E-13 T 12-10-2018 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Gene3D G3DSA:1.10.8.60 506 572 2.4E-18 T 12-10-2018 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 421 436 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 SUPERFAMILY SSF46689 548 642 5.02E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 SUPERFAMILY SSF52540 333 575 5.63E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Gene3D G3DSA:3.30.450.40 17 202 9.3E-60 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 SUPERFAMILY SSF55785 198 309 2.09E-7 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 SMART SM00091 208 274 1.4E-5 T 12-10-2018 IPR000014 PAS domain CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Gene3D G3DSA:1.10.10.60 600 642 1.4E-14 T 12-10-2018 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Pfam PF00158 Sigma-54 interaction domain 334 502 1.0E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Pfam PF02954 Bacterial regulatory protein, Fis family 603 640 1.1E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLSA_c40770 ea9875bb5ac46ed855c379d400aa82ac 646 Gene3D G3DSA:3.40.50.300 323 505 2.8E-64 T 12-10-2018 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 Gene3D G3DSA:2.40.50.40 143 212 1.8E-15 T 12-10-2018 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 Gene3D G3DSA:3.40.50.2300 1 125 8.6E-35 T 12-10-2018 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 SMART SM00448 3 114 1.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 Pfam PF00072 Response regulator receiver domain 5 114 9.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 SMART SM00850 153 251 3.1E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 Pfam PF04397 LytTr DNA-binding domain 155 250 7.6E-20 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c32870 8a023cd36b5fac4f0c518368473d5cde 252 SUPERFAMILY SSF52172 3 119 1.35E-31 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c22430 75e6ec3156e9adfbeee45a114c2a1f24 330 Pfam PF00589 Phage integrase family 144 315 4.0E-41 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c22430 75e6ec3156e9adfbeee45a114c2a1f24 330 SUPERFAMILY SSF56349 24 322 4.12E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c22430 75e6ec3156e9adfbeee45a114c2a1f24 330 Gene3D G3DSA:1.10.150.130 15 130 9.0E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c22430 75e6ec3156e9adfbeee45a114c2a1f24 330 Gene3D G3DSA:1.10.443.10 144 322 2.5E-49 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c28600 cafbe25b95e325fb3ff158f6ccec6a4a 396 Gene3D G3DSA:3.40.50.2000 196 384 3.5E-11 T 12-10-2018 CLSA_c28600 cafbe25b95e325fb3ff158f6ccec6a4a 396 SUPERFAMILY SSF53756 29 382 1.67E-34 T 12-10-2018 CLSA_c28600 cafbe25b95e325fb3ff158f6ccec6a4a 396 Gene3D G3DSA:3.40.50.2000 5 195 1.5E-12 T 12-10-2018 CLSA_c28600 cafbe25b95e325fb3ff158f6ccec6a4a 396 Pfam PF09314 Domain of unknown function (DUF1972) 1 185 2.4E-86 T 12-10-2018 IPR015393 Domain of unknown function DUF1972 CLSA_c28600 cafbe25b95e325fb3ff158f6ccec6a4a 396 Pfam PF00534 Glycosyl transferases group 1 204 351 2.2E-6 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 SUPERFAMILY SSF46689 7 82 2.91E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 SUPERFAMILY SSF48498 79 193 5.84E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 Gene3D G3DSA:1.10.357.10 56 194 9.2E-17 T 12-10-2018 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 Gene3D G3DSA:1.10.10.60 7 55 1.8E-13 T 12-10-2018 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 6.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c23230 56957e4fbae363b9bcd16e9ab723d1e1 199 Pfam PF08359 YsiA-like protein, C-terminal region 77 191 1.1E-4 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 291 1.1E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 Gene3D G3DSA:3.50.50.60 40 239 1.6E-73 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 Gene3D G3DSA:3.50.50.60 2 300 1.6E-73 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 3.9E-9 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.9E-9 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 3.9E-9 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 3.9E-9 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 2.2E-15 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.2E-15 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 2.2E-15 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.2E-15 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.2E-15 T 12-10-2018 CLSA_c26510 89c313cd9a29ebba0f340fc47a512fd7 408 SUPERFAMILY SSF51905 1 300 1.53E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 38 279 1.0E-76 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 Pfam PF16745 RsgA N-terminal domain 2 54 1.8E-20 T 12-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 Gene3D G3DSA:2.40.50.140 1 59 2.3E-21 T 12-10-2018 CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 Gene3D G3DSA:1.10.40.50 223 289 1.2E-20 T 12-10-2018 CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 SUPERFAMILY SSF50249 1 60 3.38E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 286 37.653 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 Pfam PF03193 RsgA GTPase 57 220 1.5E-60 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 Gene3D G3DSA:3.40.50.300 60 220 4.8E-50 T 12-10-2018 CLSA_c13730 8dfb38fcce7074e1b82f658258c82c58 290 SUPERFAMILY SSF52540 63 282 9.57E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07430 d017681f5f4e794555f1a6d0baef3799 220 SUPERFAMILY SSF161098 13 200 1.05E-47 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c07430 d017681f5f4e794555f1a6d0baef3799 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 109 7.9E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CLSA_c07430 d017681f5f4e794555f1a6d0baef3799 220 Gene3D G3DSA:1.10.3720.10 4 218 1.5E-59 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c07430 d017681f5f4e794555f1a6d0baef3799 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 3.0E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c42190 4d4235308aa68078c97d890e8c89ea2b 164 Pfam PF04892 VanZ like family 6 151 2.6E-24 T 12-10-2018 IPR006976 VanZ-like CLSA_c42190 4d4235308aa68078c97d890e8c89ea2b 164 PIRSF PIRSF019083 1 164 4.4E-43 T 12-10-2018 IPR016747 Phosphotransbutyrylase CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Gene3D G3DSA:3.50.50.60 283 395 1.4E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Gene3D G3DSA:3.40.50.360 1 191 4.8E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 SUPERFAMILY SSF51905 290 804 1.5E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 427 800 2.1E-91 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Gene3D G3DSA:3.50.50.60 433 802 1.1E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Gene3D G3DSA:3.90.700.10 595 744 1.1E-108 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Pfam PF04205 FMN-binding domain 201 272 2.4E-9 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 SMART SM00900 201 275 1.4E-12 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Pfam PF00890 FAD binding domain 409 788 2.9E-54 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Pfam PF00890 FAD binding domain 302 384 7.0E-13 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 SUPERFAMILY SSF52218 1 168 2.0E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 Pfam PF03358 NADPH-dependent FMN reductase 1 146 4.1E-34 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c08970 7902bf47935d809e6e22c59b7b6594dd 807 SUPERFAMILY SSF56425 594 744 5.58E-35 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c24850 dd097fa3f779748040582d36522cab50 529 PIRSF PIRSF001589 342 508 1.2E-19 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c24850 dd097fa3f779748040582d36522cab50 529 PIRSF PIRSF001589 1 347 1.0E-74 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c24850 dd097fa3f779748040582d36522cab50 529 Pfam PF13537 Glutamine amidotransferase domain 45 161 6.7E-31 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CLSA_c24850 dd097fa3f779748040582d36522cab50 529 Pfam PF00733 Asparagine synthase 207 349 4.9E-42 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CLSA_c24850 dd097fa3f779748040582d36522cab50 529 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 8 355 3.2E-90 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLSA_c24850 dd097fa3f779748040582d36522cab50 529 Gene3D G3DSA:3.60.20.10 3 186 7.6E-51 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c24850 dd097fa3f779748040582d36522cab50 529 SUPERFAMILY SSF52402 195 462 6.17E-59 T 12-10-2018 CLSA_c24850 dd097fa3f779748040582d36522cab50 529 SUPERFAMILY SSF56235 1 178 7.63E-44 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c24850 dd097fa3f779748040582d36522cab50 529 Gene3D G3DSA:3.40.50.620 195 498 1.0E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c44700 0dc99bfb8adf6a2a8252078dec904718 160 Gene3D G3DSA:3.40.35.10 1 160 1.1E-54 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c44700 0dc99bfb8adf6a2a8252078dec904718 160 Pfam PF03830 PTS system sorbose subfamily IIB component 3 150 2.1E-53 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CLSA_c44700 0dc99bfb8adf6a2a8252078dec904718 160 SUPERFAMILY SSF52728 1 159 1.83E-52 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c44700 0dc99bfb8adf6a2a8252078dec904718 160 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 150 4.8E-56 T 12-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CLSA_c09950 1913c32f6475fa464827c54bec9082da 103 PIRSF PIRSF000699 1 103 1.7E-34 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c09950 1913c32f6475fa464827c54bec9082da 103 SUPERFAMILY SSF46973 2 99 4.18E-32 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 CLSA_c09950 1913c32f6475fa464827c54bec9082da 103 Gene3D G3DSA:1.20.58.280 1 103 1.5E-34 T 12-10-2018 CLSA_c09950 1913c32f6475fa464827c54bec9082da 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 9.8E-34 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Gene3D G3DSA:2.10.270.10 497 542 1.1E-13 T 12-10-2018 CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Pfam PF12733 Cadherin-like beta sandwich domain 165 255 5.6E-22 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Pfam PF12733 Cadherin-like beta sandwich domain 277 367 6.9E-18 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 SUPERFAMILY SSF69360 391 540 2.09E-37 T 12-10-2018 CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Pfam PF01473 Putative cell wall binding repeat 462 480 0.0035 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Pfam PF01473 Putative cell wall binding repeat 502 520 8.2E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Pfam PF01473 Putative cell wall binding repeat 442 460 0.066 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Pfam PF01473 Putative cell wall binding repeat 483 500 4.3E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41880 268b12e297d50052ba5e7dce030e2d95 542 Gene3D G3DSA:2.10.270.10 405 496 1.2E-20 T 12-10-2018 CLSA_c38740 6977ed733a98800e76916ec5ca6f4e7f 159 Gene3D G3DSA:1.10.10.10 2 46 1.5E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c38740 6977ed733a98800e76916ec5ca6f4e7f 159 Pfam PF01037 Lrp/AsnC ligand binding domain 64 137 3.0E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLSA_c38740 6977ed733a98800e76916ec5ca6f4e7f 159 Gene3D G3DSA:3.30.70.920 49 146 1.2E-19 T 12-10-2018 CLSA_c38740 6977ed733a98800e76916ec5ca6f4e7f 159 SUPERFAMILY SSF54909 60 140 1.34E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c38740 6977ed733a98800e76916ec5ca6f4e7f 159 SMART SM00344 2 107 9.6E-6 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLSA_c38740 6977ed733a98800e76916ec5ca6f4e7f 159 SUPERFAMILY SSF46785 3 56 1.7E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c36230 33f4d5b4a08ef61fcab72e73259bb551 554 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 435 554 2.1E-13 T 12-10-2018 IPR018760 Protein of unknown function DUF2326 CLSA_c39780 10202604a1a373779611560ba7656460 119 Pfam PF00072 Response regulator receiver domain 4 115 6.2E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c39780 10202604a1a373779611560ba7656460 119 SUPERFAMILY SSF52172 1 118 2.42E-40 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c39780 10202604a1a373779611560ba7656460 119 Gene3D G3DSA:3.40.50.2300 1 119 4.0E-40 T 12-10-2018 CLSA_c39780 10202604a1a373779611560ba7656460 119 SMART SM00448 2 114 1.4E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 305 584 5.8E-79 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 Gene3D G3DSA:3.40.50.150 389 585 1.7E-60 T 12-10-2018 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 Pfam PF05175 Methyltransferase small domain 408 502 2.6E-15 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 53 301 7.0E-81 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 SUPERFAMILY SSF53335 306 583 1.52E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 Gene3D G3DSA:1.10.8.10 304 388 1.2E-20 T 12-10-2018 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 486 498 5.4E-5 T 12-10-2018 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 419 433 5.4E-5 T 12-10-2018 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 525 549 5.4E-5 T 12-10-2018 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 Pfam PF07136 Protein of unknown function (DUF1385) 53 296 1.0E-89 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 328 581 1.3E-86 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 489 495 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLSA_c05000 a2b3ea117a5ed4bd74e31b9c70bf697e 587 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 306 585 40.655 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 SUPERFAMILY SSF158472 194 243 1.57E-8 T 12-10-2018 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 1.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 1.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 1.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 SMART SM00387 380 491 1.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 Gene3D G3DSA:1.20.1480.50 159 252 1.3E-13 T 12-10-2018 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 SUPERFAMILY SSF47384 257 335 9.22E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 SMART SM00388 268 335 5.4E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 Gene3D G3DSA:1.10.287.130 259 339 1.8E-24 T 12-10-2018 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 1.1E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 Pfam PF00672 HAMP domain 195 241 9.6E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 490 2.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 SMART SM00304 194 246 2.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 Gene3D G3DSA:3.30.565.10 340 493 1.9E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c38170 0951ac23e189b3627749aaa78728c426 494 SUPERFAMILY SSF55874 325 487 1.96E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 SUPERFAMILY SSF53756 3 786 2.28E-283 T 12-10-2018 CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 Pfam PF00343 Carbohydrate phosphorylase 90 781 6.5E-290 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 4 781 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 Gene3D G3DSA:3.40.50.2000 439 771 0.0 T 12-10-2018 CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 Gene3D G3DSA:3.40.50.2000 34 781 0.0 T 12-10-2018 CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 PIRSF PIRSF000460 1 790 2.4E-206 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c11260 5f881b8d92a771c1e61f68a3bca07ea0 791 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 626 638 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLSA_c13830 4905039856c917669e5bfda837b8a355 390 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 28 379 4.8E-104 T 12-10-2018 IPR014226 Sporulation integral membrane protein YlbJ CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 SUPERFAMILY SSF46589 14 100 2.67E-19 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 SUPERFAMILY SSF55681 93 339 2.08E-81 T 12-10-2018 CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 339 46.961 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 Pfam PF01409 tRNA synthetases class II core domain (F) 93 339 5.6E-104 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 339 6.4E-104 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 22 88 1.5E-22 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLSA_c27380 c899bf0a71ce1a61b3a20ed09f58c952 339 Gene3D G3DSA:3.30.930.10 9 339 4.3E-123 T 12-10-2018 CLSA_c38280 a0015f6a681e75e2d64e278acb49dc5b 579 SUPERFAMILY SSF58104 242 578 4.19E-62 T 12-10-2018 CLSA_c38280 a0015f6a681e75e2d64e278acb49dc5b 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 375 530 1.6E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c38280 a0015f6a681e75e2d64e278acb49dc5b 579 Gene3D G3DSA:1.10.287.950 270 578 4.5E-59 T 12-10-2018 CLSA_c38280 a0015f6a681e75e2d64e278acb49dc5b 579 SMART SM00283 303 578 9.7E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 Hamap MF_00015 LexA repressor [lexA]. 3 201 32.548 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 5.9E-7 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 5.9E-7 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 5.9E-7 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 Pfam PF00717 Peptidase S24-like 120 185 1.6E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 TIGRFAM TIGR00498 lexA: repressor LexA 6 200 4.1E-70 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 SUPERFAMILY SSF46785 6 70 5.06E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 Pfam PF01726 LexA DNA binding domain 6 65 1.7E-23 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 Gene3D G3DSA:2.10.109.10 85 200 3.4E-40 T 12-10-2018 CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 SUPERFAMILY SSF51306 79 199 6.1E-35 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c22460 f7d90f88c003b8a0d5b626512a199d8f 201 Gene3D G3DSA:1.10.10.10 5 68 3.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 SUPERFAMILY SSF46785 16 78 1.58E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 Pfam PF00480 ROK family 90 338 4.1E-48 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 Gene3D G3DSA:3.30.420.40 210 366 2.2E-74 T 12-10-2018 CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 64 3.0E-7 T 12-10-2018 CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 SUPERFAMILY SSF53067 89 385 2.02E-41 T 12-10-2018 CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 Gene3D G3DSA:1.10.10.10 17 82 2.6E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 ProSitePatterns PS01125 ROK family signature. 219 246 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c32990 773b2b4301b1eb4a5ae849a959ed90ab 389 Gene3D G3DSA:3.30.420.40 88 383 2.2E-74 T 12-10-2018 CLSA_c03560 2936e9f8590aac1e9e8ade01368e5d7b 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CLSA_c03560 2936e9f8590aac1e9e8ade01368e5d7b 261 Gene3D G3DSA:1.10.12.10 202 260 2.0E-18 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CLSA_c03560 2936e9f8590aac1e9e8ade01368e5d7b 261 Gene3D G3DSA:3.90.226.10 1 201 1.3E-76 T 12-10-2018 CLSA_c03560 2936e9f8590aac1e9e8ade01368e5d7b 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 5.9E-73 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CLSA_c03560 2936e9f8590aac1e9e8ade01368e5d7b 261 SUPERFAMILY SSF52096 2 254 9.16E-91 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c00940 a2a2640747d298d5d390e70a56ba7ca8 321 Gene3D G3DSA:3.90.550.10 2 219 7.8E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c00940 a2a2640747d298d5d390e70a56ba7ca8 321 SUPERFAMILY SSF53448 4 237 4.03E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c00940 a2a2640747d298d5d390e70a56ba7ca8 321 Pfam PF00535 Glycosyl transferase family 2 7 174 3.4E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 Gene3D G3DSA:1.10.287.950 361 650 1.1E-70 T 12-10-2018 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 SUPERFAMILY SSF58104 322 649 5.49E-62 T 12-10-2018 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 615 1.7E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 Gene3D G3DSA:1.20.1480.50 276 360 5.4E-11 T 12-10-2018 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 SMART SM00283 401 648 1.7E-69 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 Gene3D G3DSA:3.30.450.20 138 275 1.1E-24 T 12-10-2018 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 Pfam PF02743 Cache domain 40 264 9.2E-24 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c37840 a6aa4644f40ec40c9ae5618433f03503 650 SUPERFAMILY SSF103190 107 164 4.91E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c37390 57efc6ea3d80ae91cd870c30c0b46818 190 SUPERFAMILY SSF88659 119 186 3.18E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c37390 57efc6ea3d80ae91cd870c30c0b46818 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 185 2.2E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c37390 57efc6ea3d80ae91cd870c30c0b46818 190 SUPERFAMILY SSF88946 2 89 2.62E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c37390 57efc6ea3d80ae91cd870c30c0b46818 190 Pfam PF04542 Sigma-70 region 2 24 89 5.9E-5 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c35860 a1932033704f159a182e40d572213970 252 SUPERFAMILY SSF89082 160 246 2.88E-24 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain CLSA_c35860 a1932033704f159a182e40d572213970 252 Pfam PF13411 MerR HTH family regulatory protein 8 73 1.3E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35860 a1932033704f159a182e40d572213970 252 Gene3D G3DSA:1.10.1660.10 5 140 2.3E-39 T 12-10-2018 CLSA_c35860 a1932033704f159a182e40d572213970 252 SMART SM00422 8 75 6.9E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35860 a1932033704f159a182e40d572213970 252 Pfam PF07739 TipAS antibiotic-recognition domain 131 244 9.0E-28 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain CLSA_c35860 a1932033704f159a182e40d572213970 252 SUPERFAMILY SSF46955 8 103 1.87E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c35860 a1932033704f159a182e40d572213970 252 Gene3D G3DSA:1.10.490.50 160 249 1.8E-19 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 SUPERFAMILY SSF46894 138 233 8.79E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 SMART SM00448 7 117 1.7E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 SUPERFAMILY SSF52172 3 126 7.26E-40 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 Pfam PF00072 Response regulator receiver domain 9 117 1.3E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 Gene3D G3DSA:3.40.50.2300 1 125 1.7E-37 T 12-10-2018 CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 SMART SM00862 155 231 9.2E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 231 1.5E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c23320 f8bb2fa7996100a4a2ee64eeeba70cee 240 Gene3D G3DSA:1.10.10.10 126 238 4.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c05770 34d1001d7fd5d0dcfd1d3004945c00f3 416 SUPERFAMILY SSF55874 272 402 4.3E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c05770 34d1001d7fd5d0dcfd1d3004945c00f3 416 Pfam PF14501 GHKL domain 308 406 2.5E-9 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLSA_c05770 34d1001d7fd5d0dcfd1d3004945c00f3 416 SMART SM00387 305 415 9.2E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c05770 34d1001d7fd5d0dcfd1d3004945c00f3 416 Gene3D G3DSA:3.30.565.10 260 412 2.5E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 Gene3D G3DSA:1.20.58.410 1 82 6.5E-15 T 12-10-2018 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 SUPERFAMILY SSF75620 1 322 1.11E-126 T 12-10-2018 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 Gene3D G3DSA:3.30.160.20 185 280 4.3E-97 T 12-10-2018 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 Gene3D G3DSA:3.30.70.1660 89 317 4.3E-97 T 12-10-2018 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 SMART SM00937 45 154 2.7E-50 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 Pfam PF00472 RF-1 domain 189 297 2.1E-42 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 204 220 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 322 7.9E-150 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 323 35.401 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CLSA_c05380 60542b015d2b12f646a926fbb5108b71 323 Pfam PF03462 PCRF domain 1 178 5.8E-56 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 1.4E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 SUPERFAMILY SSF52418 76 335 9.42E-89 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 Gene3D G3DSA:3.40.1030.10 75 318 1.1E-127 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 335 38.147 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 334 1.2E-120 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 SUPERFAMILY SSF47648 1 69 1.44E-16 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 Gene3D G3DSA:1.20.970.10 7 185 1.1E-127 T 12-10-2018 CLSA_c23600 b693a8237b064b039e6497c28c4146c1 337 Pfam PF00591 Glycosyl transferase family, a/b domain 75 325 4.4E-96 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c39680 a04fb9cbdb29a5283c8797fc1bec9dc7 126 SUPERFAMILY SSF160214 38 122 4.71E-22 T 12-10-2018 IPR035924 FlaG-like superfamily CLSA_c39680 a04fb9cbdb29a5283c8797fc1bec9dc7 126 Gene3D G3DSA:3.30.160.170 7 122 1.1E-25 T 12-10-2018 IPR035924 FlaG-like superfamily CLSA_c39680 a04fb9cbdb29a5283c8797fc1bec9dc7 126 Pfam PF03646 FlaG protein 28 122 1.8E-23 T 12-10-2018 IPR005186 FlaG protein CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 Gene3D G3DSA:1.10.10.10 20 88 8.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 SUPERFAMILY SSF47979 82 146 7.06E-15 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 SUPERFAMILY SSF46785 20 80 6.06E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 SMART SM00529 42 140 6.5E-24 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 82 143 7.6E-15 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 20 76 1.4E-17 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 CLSA_c33160 ccef9a0758b07fc4dfc5552546b964d9 154 Gene3D G3DSA:1.10.60.10 92 154 1.3E-14 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Pfam PF03123 CAT RNA binding domain 3 57 4.4E-16 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 SMART SM01061 2 61 3.1E-15 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Gene3D G3DSA:2.30.24.10 1 67 1.1E-14 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Pfam PF00874 PRD domain 182 270 3.9E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Pfam PF00874 PRD domain 79 163 3.0E-20 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 SUPERFAMILY SSF63520 178 271 3.53E-19 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 SUPERFAMILY SSF50151 2 55 1.7E-11 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Gene3D G3DSA:1.20.890.100 167 221 3.2E-10 T 12-10-2018 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 SUPERFAMILY SSF63520 62 168 3.27E-26 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Gene3D G3DSA:1.20.58.1950 223 272 4.5E-7 T 12-10-2018 CLSA_c10080 8db78e41ffe8c09db850ce0d95caaca6 278 Gene3D G3DSA:1.10.1790.10 68 166 4.2E-28 T 12-10-2018 CLSA_c05510 c599db0d278c10797e46cf09463f8ed6 137 Pfam PF00892 EamA-like transporter family 2 136 1.7E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c05510 c599db0d278c10797e46cf09463f8ed6 137 SUPERFAMILY SSF103481 44 136 1.19E-12 T 12-10-2018 CLSA_c16720 d7b14162e80dc39a996831a946736426 128 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 128 1.4E-47 T 12-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CLSA_c16720 d7b14162e80dc39a996831a946736426 128 Gene3D G3DSA:3.40.30.10 1 110 3.0E-42 T 12-10-2018 CLSA_c02470 8b16ea33d3505bc4c4edad85adac5b4c 344 PIRSF PIRSF000355 1 344 9.9E-129 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02470 8b16ea33d3505bc4c4edad85adac5b4c 344 SUPERFAMILY SSF47240 17 340 1.35E-97 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c02470 8b16ea33d3505bc4c4edad85adac5b4c 344 Pfam PF00268 Ribonucleotide reductase, small chain 31 309 4.0E-82 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c02470 8b16ea33d3505bc4c4edad85adac5b4c 344 Gene3D G3DSA:1.10.620.20 8 316 5.7E-100 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CLSA_c02470 8b16ea33d3505bc4c4edad85adac5b4c 344 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 118 134 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Gene3D G3DSA:3.40.120.10 323 450 7.5E-38 T 12-10-2018 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Gene3D G3DSA:3.30.310.50 483 568 2.2E-8 T 12-10-2018 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 505 555 7.3E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Gene3D G3DSA:3.40.120.10 205 322 7.2E-22 T 12-10-2018 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 SUPERFAMILY SSF55957 444 571 4.84E-16 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 SUPERFAMILY SSF53738 205 313 3.49E-18 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Gene3D G3DSA:3.40.120.10 32 184 1.3E-47 T 12-10-2018 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 449 5.8E-24 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 176 3.4E-41 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 313 2.0E-23 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 SUPERFAMILY SSF53738 28 216 3.85E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 SUPERFAMILY SSF53738 302 453 5.89E-33 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c12290 2ad08124c2fa615ed884d3485ee69ad2 575 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 136 145 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Pfam PF08239 Bacterial SH3 domain 192 243 5.4E-13 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Pfam PF05257 CHAP domain 308 390 1.2E-14 T 12-10-2018 IPR007921 CHAP domain CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Gene3D G3DSA:2.10.270.10 6 164 1.4E-42 T 12-10-2018 CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 SMART SM00287 182 246 4.0E-7 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 SUPERFAMILY SSF69360 31 156 5.23E-38 T 12-10-2018 CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Gene3D G3DSA:3.90.1720.10 299 416 2.1E-23 T 12-10-2018 CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Gene3D G3DSA:2.30.30.40 181 253 3.7E-15 T 12-10-2018 CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Pfam PF01473 Putative cell wall binding repeat 50 67 1.9E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Pfam PF01473 Putative cell wall binding repeat 89 107 2.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Pfam PF01473 Putative cell wall binding repeat 109 127 1.1E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 Pfam PF01473 Putative cell wall binding repeat 69 79 0.49 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c44050 8ca68694c7f9aab6d7d2702c505cd0f3 420 SUPERFAMILY SSF54001 280 420 2.52E-27 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 Gene3D G3DSA:3.40.50.720 169 338 2.0E-130 T 12-10-2018 CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 Pfam PF00107 Zinc-binding dehydrogenase 189 256 1.2E-9 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 SUPERFAMILY SSF50129 1 177 1.02E-61 T 12-10-2018 IPR011032 GroES-like superfamily CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 Gene3D G3DSA:3.90.180.10 4 365 2.0E-130 T 12-10-2018 CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 141 2.3E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.1E-12 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated CLSA_c28950 996e7fd38175485615ef11b0f2b9dd07 378 SUPERFAMILY SSF51735 156 338 3.36E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c27820 9107d0c0fc21eb968ddb9e9d2ade09d0 355 SUPERFAMILY SSF82171 58 308 6.67E-6 T 12-10-2018 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 331 29.368 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 PIRSF PIRSF005485 1 342 2.7E-104 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 9 73 9.2E-5 T 12-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 Gene3D G3DSA:3.30.390.60 130 232 1.7E-56 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 Gene3D G3DSA:3.30.450.40 106 337 1.7E-56 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 Pfam PF01628 HrcA protein C terminal domain 106 324 4.6E-57 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 SUPERFAMILY SSF55781 72 340 2.16E-55 T 12-10-2018 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 337 5.9E-101 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 SUPERFAMILY SSF46785 3 86 1.82E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c10830 8ecc47f18f8d6abb71f5b41715ac1c68 343 Gene3D G3DSA:1.10.10.10 1 86 3.7E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c42870 c65b5bb1b97236a36b1663e8d1a87690 399 Gene3D G3DSA:1.10.4160.10 2 398 1.1E-40 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily CLSA_c42870 c65b5bb1b97236a36b1663e8d1a87690 399 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 9 387 6.6E-119 T 12-10-2018 IPR012732 Hydroxymethylpyrimidine transporter CytX CLSA_c42870 c65b5bb1b97236a36b1663e8d1a87690 399 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 350 1.2E-23 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 CLSA_c42580 3617d8a5b44aaa3f4c33cb2a1d1a41a0 343 Pfam PF10114 Sensory domain found in PocR 15 177 1.1E-55 T 12-10-2018 IPR018771 PocR domain CLSA_c42580 3617d8a5b44aaa3f4c33cb2a1d1a41a0 343 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 219 342 4.2E-29 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42580 3617d8a5b44aaa3f4c33cb2a1d1a41a0 343 SMART SM00283 128 340 0.0018 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42580 3617d8a5b44aaa3f4c33cb2a1d1a41a0 343 SUPERFAMILY SSF58104 168 341 1.57E-40 T 12-10-2018 CLSA_c42580 3617d8a5b44aaa3f4c33cb2a1d1a41a0 343 Gene3D G3DSA:1.10.287.950 121 343 4.1E-36 T 12-10-2018 CLSA_c08660 ded0464037f091338067690115d7a43b 286 Gene3D G3DSA:1.10.10.60 178 228 1.4E-12 T 12-10-2018 CLSA_c08660 ded0464037f091338067690115d7a43b 286 SUPERFAMILY SSF46689 231 281 2.69E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c08660 ded0464037f091338067690115d7a43b 286 Gene3D G3DSA:2.60.120.280 39 163 2.7E-9 T 12-10-2018 CLSA_c08660 ded0464037f091338067690115d7a43b 286 SUPERFAMILY SSF51215 19 162 1.44E-28 T 12-10-2018 IPR037923 Transcription regulator HTH-like CLSA_c08660 ded0464037f091338067690115d7a43b 286 Gene3D G3DSA:1.10.10.60 229 284 2.5E-15 T 12-10-2018 CLSA_c08660 ded0464037f091338067690115d7a43b 286 SMART SM00342 195 278 7.9E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c08660 ded0464037f091338067690115d7a43b 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c08660 ded0464037f091338067690115d7a43b 286 SUPERFAMILY SSF46689 179 228 1.08E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c08660 ded0464037f091338067690115d7a43b 286 Pfam PF12833 Helix-turn-helix domain 201 279 2.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c08660 ded0464037f091338067690115d7a43b 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 4.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c08660 ded0464037f091338067690115d7a43b 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 4.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c08660 ded0464037f091338067690115d7a43b 286 Pfam PF02311 AraC-like ligand binding domain 29 155 2.4E-25 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLSA_c13750 a2efd8ff3fb405b08d7d85457d0df50e 211 SMART SM00983 146 205 1.5E-15 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLSA_c13750 a2efd8ff3fb405b08d7d85457d0df50e 211 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 18 123 6.7E-26 T 12-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLSA_c13750 a2efd8ff3fb405b08d7d85457d0df50e 211 SUPERFAMILY SSF63999 3 130 7.85E-32 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLSA_c13750 a2efd8ff3fb405b08d7d85457d0df50e 211 Gene3D G3DSA:3.40.50.10240 1 211 9.4E-63 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLSA_c13750 a2efd8ff3fb405b08d7d85457d0df50e 211 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 206 1.1E-50 T 12-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLSA_c13750 a2efd8ff3fb405b08d7d85457d0df50e 211 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 145 202 1.6E-10 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 SMART SM00388 234 300 7.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 SUPERFAMILY SSF55874 289 449 9.3E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 SMART SM00387 348 449 2.0E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 Gene3D G3DSA:1.10.287.130 203 298 5.7E-15 T 12-10-2018 CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 3.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 447 9.9E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 Gene3D G3DSA:3.30.565.10 304 449 3.4E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 SUPERFAMILY SSF47384 220 298 2.35E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c21270 92a5c033a45246cadab7b013e00ca667 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.5E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c08960 3c0f58f8318d010b1ca6db8a8f1a43a2 199 Pfam PF03358 NADPH-dependent FMN reductase 1 146 4.2E-35 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c08960 3c0f58f8318d010b1ca6db8a8f1a43a2 199 Gene3D G3DSA:3.40.50.360 2 181 6.7E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c08960 3c0f58f8318d010b1ca6db8a8f1a43a2 199 SUPERFAMILY SSF52218 1 172 1.82E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c22260 47902e4cc77b3574f5d103f2c5d49db3 243 SUPERFAMILY SSF52540 2 224 3.55E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22260 47902e4cc77b3574f5d103f2c5d49db3 243 SMART SM00382 27 209 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c22260 47902e4cc77b3574f5d103f2c5d49db3 243 Pfam PF00005 ABC transporter 18 161 2.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c22260 47902e4cc77b3574f5d103f2c5d49db3 243 Gene3D G3DSA:3.40.50.300 1 242 3.0E-65 T 12-10-2018 CLSA_c34380 3d55bd60a8adc9e3bcb9e2217c844775 118 Gene3D G3DSA:3.30.1330.40 1 118 2.9E-27 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CLSA_c34380 3d55bd60a8adc9e3bcb9e2217c844775 118 Pfam PF01042 Endoribonuclease L-PSP 16 114 5.8E-10 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CLSA_c34380 3d55bd60a8adc9e3bcb9e2217c844775 118 SUPERFAMILY SSF55298 9 116 2.67E-23 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 SUPERFAMILY SSF55174 301 405 1.01E-16 T 12-10-2018 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 Gene3D G3DSA:1.10.240.10 221 323 3.1E-37 T 12-10-2018 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 SUPERFAMILY SSF52374 3 319 1.83E-105 T 12-10-2018 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 405 43.578 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.8E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 1.8E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 1.8E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 1.8E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 SMART SM00363 341 401 5.1E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 Pfam PF00579 tRNA synthetases class I (W and Y) 29 319 5.0E-84 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 Gene3D G3DSA:3.40.50.620 1 220 4.9E-88 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 406 1.2E-135 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 Pfam PF01479 S4 domain 342 387 2.7E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c41170 954aff3a508cac4aa56cf2a6f7a8d499 406 Gene3D G3DSA:3.10.290.10 324 406 4.1E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 1.2E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 4.6E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 Gene3D G3DSA:3.40.50.300 1 330 4.3E-102 T 12-10-2018 CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 Pfam PF00005 ABC transporter 25 182 3.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 SUPERFAMILY SSF52540 4 253 2.23E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44000 949bf9848da640a2076ed92120d44aac 335 SMART SM00382 33 240 3.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c22800 3137ba12797b8eaadec04b1a15052612 84 SUPERFAMILY SSF47413 2 59 1.49E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c22800 3137ba12797b8eaadec04b1a15052612 84 SMART SM00530 1 57 3.0E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c22800 3137ba12797b8eaadec04b1a15052612 84 Gene3D G3DSA:1.10.260.40 1 60 2.8E-15 T 12-10-2018 CLSA_c22800 3137ba12797b8eaadec04b1a15052612 84 Pfam PF12844 Helix-turn-helix domain 1 57 1.3E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c32160 b0b48aa272d3951b2ff9c60ba6e02cde 37 Pfam PF02574 Homocysteine S-methyltransferase 9 29 4.3E-5 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLSA_c32160 b0b48aa272d3951b2ff9c60ba6e02cde 37 SUPERFAMILY SSF82282 7 29 6.28E-7 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c17780 192174060a17589932c3f0c27dac63ed 487 Pfam PF07690 Major Facilitator Superfamily 18 409 2.7E-47 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c17780 192174060a17589932c3f0c27dac63ed 487 Gene3D G3DSA:1.20.1250.20 259 476 3.0E-17 T 12-10-2018 CLSA_c17780 192174060a17589932c3f0c27dac63ed 487 Gene3D G3DSA:1.20.1720.10 14 219 1.2E-42 T 12-10-2018 CLSA_c17780 192174060a17589932c3f0c27dac63ed 487 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 443 2.1E-97 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c17780 192174060a17589932c3f0c27dac63ed 487 SUPERFAMILY SSF103473 10 470 7.59E-59 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c15560 8687cdc1ac10f804dbb124704979d3d6 128 Gene3D G3DSA:3.40.50.510 1 124 2.0E-44 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c15560 8687cdc1ac10f804dbb124704979d3d6 128 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 121 2.2E-41 T 12-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CLSA_c15560 8687cdc1ac10f804dbb124704979d3d6 128 SUPERFAMILY SSF53062 1 119 3.92E-35 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c15560 8687cdc1ac10f804dbb124704979d3d6 128 Pfam PF03610 PTS system fructose IIA component 3 116 1.6E-29 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 153 23.889 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 Gene3D G3DSA:2.30.30.180 90 149 2.8E-6 T 12-10-2018 CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 SUPERFAMILY SSF75420 7 86 3.53E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 Gene3D G3DSA:3.30.300.70 2 83 4.0E-29 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 SUPERFAMILY SSF74942 87 150 8.89E-13 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 Pfam PF02576 RimP N-terminal domain 13 85 8.2E-28 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CLSA_c14370 eb10e41305674339bc26a46ed8470094 153 Pfam PF17384 RimP C-terminal SH3 domain 89 152 2.7E-13 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CLSA_c28820 73d90da2b9417cfeac9980c63419a455 289 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 11 22 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c28820 73d90da2b9417cfeac9980c63419a455 289 Pfam PF13186 Iron-sulfur cluster-binding domain 217 282 3.1E-13 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c28820 73d90da2b9417cfeac9980c63419a455 289 SUPERFAMILY SSF102114 5 284 3.14E-35 T 12-10-2018 CLSA_c28820 73d90da2b9417cfeac9980c63419a455 289 Pfam PF04055 Radical SAM superfamily 9 132 4.5E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 SMART SM00798 133 438 2.7E-167 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 Pfam PF02142 MGS-like domain 14 128 6.9E-24 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 Gene3D G3DSA:3.40.140.20 368 500 1.2E-52 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 PIRSF PIRSF000414 1 500 3.8E-202 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 500 2.9E-190 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 SUPERFAMILY SSF52335 2 191 3.79E-65 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 436 8.9E-110 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 Gene3D G3DSA:3.40.140.20 200 356 3.0E-57 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 Gene3D G3DSA:3.40.50.1380 1 195 3.2E-80 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 SUPERFAMILY SSF53927 204 500 1.3E-117 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 SMART SM00851 14 128 2.8E-49 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain CLSA_c13020 7a3a816813253554eb4bfce3368c5433 500 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 500 41.296 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 PIRSF PIRSF000858 1 516 8.4E-217 T 12-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 Pfam PF01144 Coenzyme A transferase 9 240 1.1E-29 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 SUPERFAMILY SSF100950 3 250 7.64E-82 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 SUPERFAMILY SSF100950 274 515 9.27E-78 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 SMART SM00882 4 241 3.6E-55 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 Gene3D G3DSA:3.40.1080.10 273 516 1.6E-107 T 12-10-2018 CLSA_c27710 ac6d60946fcf919d1e6d828e3a6e75ff 516 Gene3D G3DSA:3.40.1080.10 1 266 3.4E-99 T 12-10-2018 CLSA_c28530 3f9cabf1d10553c5ff0ce862cc34cba6 469 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 436 3.8E-11 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c28530 3f9cabf1d10553c5ff0ce862cc34cba6 469 Pfam PF01943 Polysaccharide biosynthesis protein 7 266 1.6E-16 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c25070 e29f9a5960b7e9878750dc754ec78048 211 SMART SM01144 13 205 6.1E-53 T 12-10-2018 IPR005636 DTW CLSA_c25070 e29f9a5960b7e9878750dc754ec78048 211 Pfam PF03942 DTW domain 16 198 3.3E-43 T 12-10-2018 IPR005636 DTW CLSA_c19390 6e28f3ceaff210df532c8b9b335d8ac7 226 Pfam PF14172 Domain of unknown function (DUF4309) 75 209 3.7E-48 T 12-10-2018 IPR025453 Protein of unknown function DUF4309 CLSA_c18710 bce97fa4f3b9bd9e1288cf539f2321ea 434 SUPERFAMILY SSF103473 7 419 2.75E-75 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c18710 bce97fa4f3b9bd9e1288cf539f2321ea 434 Pfam PF07690 Major Facilitator Superfamily 19 382 1.2E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c18710 bce97fa4f3b9bd9e1288cf539f2321ea 434 Gene3D G3DSA:1.20.1250.20 7 422 2.5E-69 T 12-10-2018 CLSA_c38650 4d825481bf2cbee1aad06a58c0383c22 116 Pfam PF00462 Glutaredoxin 4 47 3.2E-5 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CLSA_c38650 4d825481bf2cbee1aad06a58c0383c22 116 SUPERFAMILY SSF52833 2 112 6.71E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c38650 4d825481bf2cbee1aad06a58c0383c22 116 Pfam PF03960 ArsC family 50 108 7.3E-6 T 12-10-2018 IPR006660 Arsenate reductase-like CLSA_c38650 4d825481bf2cbee1aad06a58c0383c22 116 Gene3D G3DSA:3.40.30.10 1 113 1.6E-23 T 12-10-2018 CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 SUPERFAMILY SSF52540 386 598 3.72E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 SUPERFAMILY SSF48334 128 181 7.46E-7 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 Gene3D G3DSA:1.10.1420.10 112 188 1.6E-5 T 12-10-2018 CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 Pfam PF00488 MutS domain V 427 597 3.1E-32 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 Gene3D G3DSA:3.40.50.300 387 600 1.2E-56 T 12-10-2018 CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 PIRSF PIRSF037677 112 186 0.0012 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 PIRSF PIRSF037677 344 600 9.9E-35 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CLSA_c36360 15b0eb3f99d2b2403534c611599e5378 600 SMART SM00534 423 600 6.7E-16 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 SUPERFAMILY SSF53901 2 409 8.52E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 3.5E-58 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 Gene3D G3DSA:3.40.47.10 255 398 5.2E-54 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 366 3.4E-40 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 PIRSF PIRSF000447 1 411 1.5E-176 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 Gene3D G3DSA:3.40.47.10 1 253 2.7E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 407 5.4E-188 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CLSA_c13130 ae17db37e3d5c5378a1bb96385f38f2b 411 SMART SM00825 Beta-ketoacyl synthase 5 411 6.3E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLSA_c35800 df51e5d3d18e802fda7e019b06a6080b 54 Pfam PF02796 Helix-turn-helix domain of resolvase 24 47 1.5E-5 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CLSA_c35800 df51e5d3d18e802fda7e019b06a6080b 54 SUPERFAMILY SSF88659 29 54 3.99E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c35800 df51e5d3d18e802fda7e019b06a6080b 54 Gene3D G3DSA:1.10.10.60 7 54 4.4E-7 T 12-10-2018 CLSA_c36730 d54dae78f1941257e2de5f69c52ebe98 234 Pfam PF00005 ABC transporter 22 158 1.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c36730 d54dae78f1941257e2de5f69c52ebe98 234 SMART SM00382 30 223 4.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36730 d54dae78f1941257e2de5f69c52ebe98 234 Gene3D G3DSA:3.40.50.300 2 230 1.7E-56 T 12-10-2018 CLSA_c36730 d54dae78f1941257e2de5f69c52ebe98 234 SUPERFAMILY SSF52540 4 213 1.38E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36730 d54dae78f1941257e2de5f69c52ebe98 234 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 6 227 1.6E-114 T 12-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 SMART SM00903 6 154 5.6E-22 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 SUPERFAMILY SSF50475 4 149 3.53E-37 T 12-10-2018 CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 Pfam PF01613 Flavin reductase like domain 6 146 1.9E-24 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 SUPERFAMILY SSF57802 174 213 8.25E-13 T 12-10-2018 CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 Gene3D G3DSA:2.20.28.10 174 213 4.8E-13 T 12-10-2018 CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 Pfam PF00301 Rubredoxin 176 211 2.4E-5 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 CLSA_c24060 06724b730770808c55e75bfd332c0e78 214 Gene3D G3DSA:2.30.110.10 1 167 1.2E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 1.1E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.1E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 1.1E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 1.1E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 264 1.1E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 1.1E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 Gene3D G3DSA:3.50.50.60 5 278 1.2E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 Gene3D G3DSA:3.50.50.60 115 219 1.2E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 SUPERFAMILY SSF51905 1 284 6.29E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 143 2.8E-8 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 258 1.2E-11 T 12-10-2018 CLSA_c37780 04e8dce6ba8effccecad61dcdc60effd 288 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-11 T 12-10-2018 CLSA_c25600 46e841008e0f19273fd799fec8746283 169 Gene3D G3DSA:2.30.110.10 4 169 3.3E-23 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c25600 46e841008e0f19273fd799fec8746283 169 Pfam PF01613 Flavin reductase like domain 25 167 5.0E-6 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c25600 46e841008e0f19273fd799fec8746283 169 SUPERFAMILY SSF50475 5 152 2.67E-20 T 12-10-2018 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 Gene3D G3DSA:3.40.50.1970 1 173 3.8E-64 T 12-10-2018 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 Pfam PF01761 3-dehydroquinate synthase 68 323 2.9E-97 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 349 61.572 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 PIRSF PIRSF001455 5 348 1.6E-105 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 343 2.5E-116 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 SUPERFAMILY SSF56796 5 339 2.22E-97 T 12-10-2018 CLSA_c06810 ed073d1adfeea8981867f804b615765a 350 Gene3D G3DSA:1.20.1090.10 174 348 3.6E-52 T 12-10-2018 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 SUPERFAMILY SSF116734 6 224 6.54E-40 T 12-10-2018 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 SUPERFAMILY SSF116734 228 431 1.31E-48 T 12-10-2018 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 Gene3D G3DSA:3.90.220.20 241 383 5.6E-90 T 12-10-2018 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 Gene3D G3DSA:1.10.287.1120 177 426 5.6E-90 T 12-10-2018 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 Gene3D G3DSA:3.90.220.20 83 430 5.6E-90 T 12-10-2018 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 Pfam PF01420 Type I restriction modification DNA specificity domain 237 414 1.4E-21 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLSA_c29360 ce8eac3cd64a25981aa68793aee2524c 431 Pfam PF01420 Type I restriction modification DNA specificity domain 17 206 5.4E-13 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 Gene3D G3DSA:1.20.1250.20 3 388 4.2E-76 T 12-10-2018 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 PRINTS PR01035 Tetracycline resistance protein signature 78 102 1.4E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 PRINTS PR01035 Tetracycline resistance protein signature 280 301 1.4E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 PRINTS PR01035 Tetracycline resistance protein signature 164 184 1.4E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 PRINTS PR01035 Tetracycline resistance protein signature 21 37 1.4E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.4E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.4E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 Pfam PF07690 Major Facilitator Superfamily 15 357 6.8E-55 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c44350 505a5f3a4cfe717b181b4033b9868096 401 SUPERFAMILY SSF103473 7 390 1.26E-70 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c17760 0440040440f783f0342cd475296aa983 806 Gene3D G3DSA:3.40.50.1000 484 750 6.0E-82 T 12-10-2018 IPR023214 HAD superfamily CLSA_c17760 0440040440f783f0342cd475296aa983 806 Pfam PF00702 haloacid dehalogenase-like hydrolase 500 711 4.2E-35 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 SUPERFAMILY SSF81653 304 401 7.85E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 Pfam PF00122 E1-E2 ATPase 303 482 7.1E-48 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 SUPERFAMILY SSF81665 252 794 2.88E-13 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 775 5.9E-74 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 SUPERFAMILY SSF55008 26 85 5.5E-11 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c17760 0440040440f783f0342cd475296aa983 806 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 505 511 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 Gene3D G3DSA:3.30.70.100 107 194 1.1E-7 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 Gene3D G3DSA:3.30.70.100 26 106 5.4E-11 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 733 3.3E-21 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 517 3.3E-21 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 351 365 3.3E-21 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 3.3E-21 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 3.3E-21 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00941 Cadmium-transporting ATPase signature 29 38 8.2E-13 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00941 Cadmium-transporting ATPase signature 386 400 8.2E-13 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00941 Cadmium-transporting ATPase signature 119 140 8.2E-13 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00941 Cadmium-transporting ATPase signature 286 306 8.2E-13 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 PRINTS PR00941 Cadmium-transporting ATPase signature 367 383 8.2E-13 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 Gene3D G3DSA:3.40.1110.10 514 625 6.0E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 Pfam PF00403 Heavy-metal-associated domain 29 84 7.2E-9 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c17760 0440040440f783f0342cd475296aa983 806 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 799 5.4E-173 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLSA_c17760 0440040440f783f0342cd475296aa983 806 Gene3D G3DSA:2.70.150.20 295 405 2.9E-30 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 SUPERFAMILY SSF56784 501 798 1.96E-58 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c17760 0440040440f783f0342cd475296aa983 806 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 252 801 3.2E-160 T 12-10-2018 CLSA_c17760 0440040440f783f0342cd475296aa983 806 SUPERFAMILY SSF55008 104 164 1.31E-9 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 ProSitePatterns PS00057 Ribosomal protein S18 signature. 34 57 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 SUPERFAMILY SSF46911 13 85 6.8E-30 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 Gene3D G3DSA:4.10.640.10 2 86 3.9E-32 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 Pfam PF01084 Ribosomal protein S18 30 81 5.9E-28 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 34 86 3.0E-23 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 PRINTS PR00974 Ribosomal protein S18 family signature 73 83 4.7E-19 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 PRINTS PR00974 Ribosomal protein S18 family signature 51 58 4.7E-19 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 PRINTS PR00974 Ribosomal protein S18 family signature 41 51 4.7E-19 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 PRINTS PR00974 Ribosomal protein S18 family signature 59 73 4.7E-19 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 TIGRFAM TIGR00165 S18: ribosomal protein bS18 19 85 3.9E-33 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c45320 01da5635b383e3f8a0641e99a621f453 86 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 86 22.443 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 Gene3D G3DSA:3.90.640.10 182 255 4.5E-127 T 12-10-2018 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 Pfam PF06723 MreB/Mbl protein 8 331 1.3E-145 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 8 332 5.6E-138 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 Gene3D G3DSA:3.30.420.40 150 313 4.5E-127 T 12-10-2018 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 SUPERFAMILY SSF53067 145 333 9.88E-49 T 12-10-2018 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 SUPERFAMILY SSF53067 8 144 6.48E-41 T 12-10-2018 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 Gene3D G3DSA:3.30.420.40 10 323 4.5E-127 T 12-10-2018 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 65 88 6.6E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 45 63 6.6E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 6.6E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 6.6E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c05220 a9620fd3d78ac8cdb8adde71b8deafcc 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 6.6E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CLSA_c11090 0bd943e4f955c303eb549858276c1e7a 230 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 20 224 2.1E-56 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 CLSA_c11090 0bd943e4f955c303eb549858276c1e7a 230 Gene3D G3DSA:3.40.50.150 1 161 4.8E-53 T 12-10-2018 CLSA_c11090 0bd943e4f955c303eb549858276c1e7a 230 PIRSF PIRSF018637 1 229 1.0E-64 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 CLSA_c11090 0bd943e4f955c303eb549858276c1e7a 230 SUPERFAMILY SSF53335 7 139 2.41E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c14570 c44a61295e1b77d5f20f05e7b0538821 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 83 1.0E-38 T 12-10-2018 IPR007347 Sporulation stage V, protein S CLSA_c14570 c44a61295e1b77d5f20f05e7b0538821 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 6.0E-31 T 12-10-2018 IPR007347 Sporulation stage V, protein S CLSA_c14570 c44a61295e1b77d5f20f05e7b0538821 86 Gene3D G3DSA:3.30.110.20 1 86 5.5E-35 T 12-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 Pfam PF01197 Ribosomal protein L31 1 65 2.3E-31 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 Gene3D G3DSA:2.30.170.50 1 69 4.8E-32 T 12-10-2018 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 2.0E-31 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 29.217 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 SUPERFAMILY SSF143800 1 66 3.18E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.9E-20 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.9E-20 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c04980 97237c0033e44646515fae00c83fbe7a 69 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.9E-20 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c05930 a206901d23b20beb5d5b6781515cad75 60 Gene3D G3DSA:1.10.8.910 3 60 7.8E-24 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c05930 a206901d23b20beb5d5b6781515cad75 60 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 59 1.3E-26 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c05930 a206901d23b20beb5d5b6781515cad75 60 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 39 53 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c05930 a206901d23b20beb5d5b6781515cad75 60 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 18 27 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c38410 61d47d14c233e74e075b5f47d050b4f9 97 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 89 4.5E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c38410 61d47d14c233e74e075b5f47d050b4f9 97 SUPERFAMILY SSF52794 1 92 1.99E-20 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c38410 61d47d14c233e74e075b5f47d050b4f9 97 Gene3D G3DSA:3.40.50.2300 1 93 1.2E-24 T 12-10-2018 CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 Pfam PF00072 Response regulator receiver domain 4 111 1.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 Gene3D G3DSA:3.40.50.2300 2 126 4.2E-31 T 12-10-2018 CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 Gene3D G3DSA:1.10.10.10 127 220 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 SUPERFAMILY SSF52172 3 172 2.42E-35 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 3.1E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 SMART SM00862 144 218 1.1E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c24480 1a08d3eee2c6494778807e8349d69b82 220 SMART SM00448 2 111 8.5E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SMART SM00316 137 203 1.0E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Gene3D G3DSA:2.40.50.140 133 201 2.8E-21 T 12-10-2018 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SUPERFAMILY SSF50249 136 202 6.6E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 346 2.2E-131 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SUPERFAMILY SSF54814 282 345 2.22E-16 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SUPERFAMILY SSF69705 1 130 1.2E-37 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Gene3D G3DSA:3.30.300.20 202 280 4.0E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Pfam PF08529 NusA N-terminal domain 4 127 4.1E-41 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 383 29.875 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Pfam PF13184 NusA-like KH domain 233 301 7.8E-29 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SUPERFAMILY SSF54814 203 280 3.14E-31 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Gene3D G3DSA:3.30.1480.10 1 132 6.3E-44 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Pfam PF00575 S1 RNA binding domain 140 197 1.6E-4 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 Gene3D G3DSA:3.30.300.20 281 384 2.8E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SMART SM00322 233 306 0.22 T 12-10-2018 IPR004087 K Homology domain GO:0003676 CLSA_c14380 b0aceb7beebab6e753471ec1657e143e 384 SMART SM00322 307 384 0.068 T 12-10-2018 IPR004087 K Homology domain GO:0003676 CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 Pfam PF00994 Probable molybdopterin binding domain 4 169 3.6E-36 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 SUPERFAMILY SSF142433 249 409 2.75E-57 T 12-10-2018 IPR036653 CinA-like, C-terminal CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 SUPERFAMILY SSF53218 1 200 1.57E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 Gene3D G3DSA:3.40.980.10 1 170 4.2E-56 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 261 408 2.3E-47 T 12-10-2018 IPR008136 CinA, C-terminal CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 Gene3D G3DSA:3.90.950.20 241 409 2.5E-58 T 12-10-2018 IPR036653 CinA-like, C-terminal CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 PIRSF PIRSF006728 1 411 2.0E-160 T 12-10-2018 IPR008135 Competence-induced protein CinA CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 411 173.247 T 12-10-2018 IPR008135 Competence-induced protein CinA CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 SMART SM00852 4 170 2.0E-43 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 Pfam PF02464 Competence-damaged protein 256 408 1.5E-57 T 12-10-2018 IPR008136 CinA, C-terminal CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 409 7.0E-122 T 12-10-2018 IPR008135 Competence-induced protein CinA CLSA_c43470 a45a067e81fe3e578a324391d80fdc32 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 166 6.4E-29 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c01090 b1ad785f2492593194875f77bc183366 477 Gene3D G3DSA:3.30.565.10 321 473 2.5E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c01090 b1ad785f2492593194875f77bc183366 477 SUPERFAMILY SSF158472 198 245 2.88E-11 T 12-10-2018 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 SUPERFAMILY SSF47384 232 316 1.75E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 Gene3D G3DSA:1.10.287.130 255 316 8.7E-19 T 12-10-2018 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 Gene3D G3DSA:1.20.1480.50 156 254 1.6E-14 T 12-10-2018 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 SMART SM00388 249 315 1.0E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 SUPERFAMILY SSF55874 304 468 5.5E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c01090 b1ad785f2492593194875f77bc183366 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 315 3.0E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 SMART SM00304 196 248 4.6E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 SMART SM00387 361 472 3.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c01090 b1ad785f2492593194875f77bc183366 477 Pfam PF00672 HAMP domain 198 244 1.5E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c01090 b1ad785f2492593194875f77bc183366 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 468 4.6E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 5.7E-39 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 SUPERFAMILY SSF52540 1 303 3.04E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 365 44.046 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 365 3.0E-152 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 7.7E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 7.7E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 7.7E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 7.7E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 SUPERFAMILY SSF81271 281 362 5.45E-35 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 Pfam PF01926 50S ribosome-binding GTPase 3 125 1.0E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 PIRSF PIRSF006641 1 365 3.6E-158 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 Gene3D G3DSA:3.40.50.300 1 280 2.5E-157 T 12-10-2018 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 Gene3D G3DSA:1.10.150.300 111 198 2.5E-157 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 CLSA_c12390 6105415142fef24e3b01114b5c2e1538 365 Gene3D G3DSA:3.10.20.30 46 363 2.5E-157 T 12-10-2018 IPR012675 Beta-grasp domain superfamily CLSA_c26560 7bf517e34f3897903431aaf421ac882b 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 223 234 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c26560 7bf517e34f3897903431aaf421ac882b 335 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 334 2.6E-164 T 12-10-2018 IPR014259 Sulphite reductase, subunit A CLSA_c26560 7bf517e34f3897903431aaf421ac882b 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 304 315 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c26560 7bf517e34f3897903431aaf421ac882b 335 Pfam PF17179 4Fe-4S dicluster domain 222 318 3.8E-34 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c26560 7bf517e34f3897903431aaf421ac882b 335 SUPERFAMILY SSF46548 214 330 3.66E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c11330 71614d1cbac519bcc63efb9a0c5379ec 90 Gene3D G3DSA:3.30.70.100 1 90 2.1E-27 T 12-10-2018 CLSA_c11330 71614d1cbac519bcc63efb9a0c5379ec 90 SUPERFAMILY SSF54975 1 84 1.5E-24 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLSA_c11330 71614d1cbac519bcc63efb9a0c5379ec 90 Pfam PF00708 Acylphosphatase 6 78 1.5E-23 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLSA_c11330 71614d1cbac519bcc63efb9a0c5379ec 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLSA_c11330 71614d1cbac519bcc63efb9a0c5379ec 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 Gene3D G3DSA:2.40.37.10 9 375 1.2E-161 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 SUPERFAMILY SSF51419 17 251 7.2E-44 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 9 379 4.0E-159 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 SUPERFAMILY SSF50621 217 369 1.38E-34 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 100 336 1.4E-12 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 PIRSF PIRSF038941 1 379 8.3E-177 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CLSA_c07790 1369e893a6fc0875580b309cdc59f875 379 Gene3D G3DSA:3.20.20.10 18 248 1.2E-161 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 Gene3D G3DSA:3.40.50.2300 2 135 5.5E-20 T 12-10-2018 CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 Pfam PF04397 LytTr DNA-binding domain 148 225 1.3E-11 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 SMART SM00448 2 116 1.3E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 SMART SM00850 146 245 8.9E-14 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 Gene3D G3DSA:2.40.50.1020 136 239 3.8E-9 T 12-10-2018 CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 Pfam PF00072 Response regulator receiver domain 4 115 3.3E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c03360 1b0afad688ffa071effecc8ec0689249 252 SUPERFAMILY SSF52172 3 120 3.98E-18 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c29080 fbe68529e33d8b537cf41b0952edb4d3 483 Pfam PF06527 TniQ 4 160 2.7E-15 T 12-10-2018 IPR009492 TniQ CLSA_c29080 fbe68529e33d8b537cf41b0952edb4d3 483 Pfam PF15978 Tn7-like transposition protein D 205 312 5.0E-27 T 12-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CLSA_c29080 fbe68529e33d8b537cf41b0952edb4d3 483 Pfam PF15978 Tn7-like transposition protein D 322 444 5.5E-32 T 12-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 7.3E-22 T 12-10-2018 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 7.3E-22 T 12-10-2018 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 7.3E-22 T 12-10-2018 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 7.3E-22 T 12-10-2018 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 Gene3D G3DSA:3.50.50.60 153 284 4.6E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 SUPERFAMILY SSF51971 151 422 1.18E-58 T 12-10-2018 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 Gene3D G3DSA:3.50.50.60 285 487 6.1E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 Gene3D G3DSA:1.10.1060.10 9 152 1.1E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 SUPERFAMILY SSF46548 2 162 2.2E-32 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 477 3.1E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 2.7E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLSA_c11640 9a50c0b3c1548b8663e7bb6f7dbda536 490 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 488 1.3E-207 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 CLSA_c21730 13f771f788487d113ac0a6de255a97a6 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 416 2.2E-60 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21730 13f771f788487d113ac0a6de255a97a6 461 Pfam PF01554 MatE 246 404 3.2E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21730 13f771f788487d113ac0a6de255a97a6 461 Pfam PF01554 MatE 26 186 3.6E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21730 13f771f788487d113ac0a6de255a97a6 461 PIRSF PIRSF006603 1 452 1.1E-88 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c00650 0f9ee37d69539c63f3598e8ecac7877a 461 PIRSF PIRSF006603 1 454 3.3E-96 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c00650 0f9ee37d69539c63f3598e8ecac7877a 461 Pfam PF01554 MatE 22 185 1.1E-27 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c00650 0f9ee37d69539c63f3598e8ecac7877a 461 Pfam PF01554 MatE 258 405 2.5E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c00650 0f9ee37d69539c63f3598e8ecac7877a 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 419 5.4E-61 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 SUPERFAMILY SSF52540 328 566 4.07E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 Pfam PF00664 ABC transporter transmembrane region 23 286 6.6E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 SUPERFAMILY SSF90123 6 321 8.5E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 Pfam PF00005 ABC transporter 349 498 1.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 Gene3D G3DSA:3.40.50.300 324 574 3.8E-86 T 12-10-2018 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 Gene3D G3DSA:1.20.1560.10 4 319 5.6E-38 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c17020 8ef2fea675243c7ee78cb7741b3ca0db 582 SMART SM00382 358 544 2.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c11850 91afdbbe876a5982dbafb03904869797 86 SUPERFAMILY SSF53041 1 33 2.62E-6 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CLSA_c11850 91afdbbe876a5982dbafb03904869797 86 Pfam PF00239 Resolvase, N terminal domain 1 33 8.6E-6 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLSA_c11850 91afdbbe876a5982dbafb03904869797 86 Gene3D G3DSA:1.20.5.40 1 31 1.9E-8 T 12-10-2018 CLSA_c29860 2684b3198fdbf5aafd6c93dcf80737d5 154 Gene3D G3DSA:2.30.110.40 2 140 3.2E-22 T 12-10-2018 IPR038628 XkdM-like superfamily CLSA_c29860 2684b3198fdbf5aafd6c93dcf80737d5 154 Pfam PF09393 Phage tail tube protein 5 134 1.0E-24 T 12-10-2018 IPR018989 Phage tail tube protein CLSA_c29860 2684b3198fdbf5aafd6c93dcf80737d5 154 SUPERFAMILY SSF69279 6 137 3.06E-24 T 12-10-2018 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 317 1.1E-26 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 SMART SM00354 2 72 9.7E-35 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 Gene3D G3DSA:3.40.50.2300 63 312 1.8E-69 T 12-10-2018 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 Gene3D G3DSA:3.40.50.2300 165 294 1.8E-69 T 12-10-2018 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.9E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 Gene3D G3DSA:1.10.260.40 4 60 2.1E-23 T 12-10-2018 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 SUPERFAMILY SSF47413 3 60 2.53E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 SUPERFAMILY SSF53822 62 334 1.01E-66 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c38720 56bab9ec3cff41d2204c0daab2dffeb7 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:1.10.1200.10 1407 1486 3.7E-16 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:1.10.1200.10 2467 2551 1.7E-16 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.40.50.12780 1962 2361 2.7E-104 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.40.50.150 1078 1332 2.5E-33 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.300.30 1333 1406 3.6E-9 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.300.30 2363 2466 8.5E-24 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF47336 9 68 2.36E-7 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF08242 Methyltransferase domain 1180 1279 2.6E-11 T 12-10-2018 IPR013217 Methyltransferase type 12 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF47336 2471 2543 3.93E-12 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF53335 1154 1365 2.7E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00668 Condensation domain 118 508 1.3E-33 T 12-10-2018 IPR001242 Condensation domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00668 Condensation domain 1511 1937 1.5E-31 T 12-10-2018 IPR001242 Condensation domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00501 AMP-binding enzyme 1974 2367 5.9E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00501 AMP-binding enzyme 547 940 5.3E-72 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00550 Phosphopantetheine attachment site 1418 1481 2.1E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00550 Phosphopantetheine attachment site 2481 2542 4.0E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Pfam PF00550 Phosphopantetheine attachment site 6 63 2.2E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 685 696 - T 12-10-2018 IPR020845 AMP-binding, conserved site CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF52777 1507 1703 6.34E-21 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF47336 1410 1521 2.09E-11 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.40.50.12780 539 932 4.2E-87 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF56801 509 1428 2.75E-107 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF52777 94 263 1.22E-18 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2501 2516 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 568 964 3.6E-99 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1990 2392 2.6E-113 T 12-10-2018 IPR010071 Amino acid adenylation domain CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:1.10.1200.10 1 73 3.5E-20 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.300.30 934 1019 2.8E-13 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF52777 269 508 1.89E-36 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.559.10 85 265 2.8E-37 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.559.10 1504 1686 2.0E-53 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.559.30 267 518 2.0E-72 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 Gene3D G3DSA:3.30.559.30 1689 1943 1.2E-82 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF52777 1691 1933 3.56E-37 T 12-10-2018 CLSA_c16930 c6026efa2f1f4a693742f0fbc06ed631 2554 SUPERFAMILY SSF56801 1953 2489 6.02E-124 T 12-10-2018 CLSA_c11380 8ba6acef308e72c8b50fa5f88b974e64 236 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 117 207 3.7E-33 T 12-10-2018 IPR014197 Sporulation protein YunB CLSA_c11380 8ba6acef308e72c8b50fa5f88b974e64 236 PIRSF PIRSF021383 2 219 1.2E-51 T 12-10-2018 IPR014197 Sporulation protein YunB CLSA_c11380 8ba6acef308e72c8b50fa5f88b974e64 236 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 11 210 4.8E-57 T 12-10-2018 IPR014197 Sporulation protein YunB CLSA_c37210 df121652bb53fc40ebfb157013642921 154 Pfam PF13673 Acetyltransferase (GNAT) domain 26 145 9.0E-17 T 12-10-2018 IPR000182 GNAT domain CLSA_c37210 df121652bb53fc40ebfb157013642921 154 Gene3D G3DSA:3.40.630.30 7 147 2.0E-34 T 12-10-2018 CLSA_c37210 df121652bb53fc40ebfb157013642921 154 SUPERFAMILY SSF55729 7 145 5.4E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 SMART SM00382 361 553 6.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 Gene3D G3DSA:3.40.50.300 328 577 2.8E-82 T 12-10-2018 CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 Pfam PF00664 ABC transporter transmembrane region 15 285 7.2E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 SUPERFAMILY SSF90123 4 314 2.62E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 SUPERFAMILY SSF52540 335 571 3.7E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 Pfam PF00005 ABC transporter 353 499 1.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c36890 cb476708b5a40e02fc01263702328ec7 577 Gene3D G3DSA:1.20.1560.10 1 315 2.3E-88 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 Pfam PF13684 Dihydroxyacetone kinase family 231 548 2.7E-126 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 SMART SM01121 231 548 3.1E-175 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 Gene3D G3DSA:1.25.40.340 6 227 6.7E-13 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 SUPERFAMILY SSF101473 2 200 1.83E-47 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 SMART SM01120 36 199 2.7E-70 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 548 1.8E-204 T 12-10-2018 IPR019986 DAK2 domain-containing protein YloV CLSA_c13780 95f496898f16ad2847d30aacb9d4eeb0 548 Pfam PF02734 DAK2 domain 36 198 5.6E-45 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 221 329 9.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 SUPERFAMILY SSF55874 180 330 4.19E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 Gene3D G3DSA:1.10.287.130 128 173 1.1E-29 T 12-10-2018 CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 286 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 272 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 SMART SM00387 220 332 1.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c38890 1eb56bd1f2cefd2f96cab089f142f1c5 337 Gene3D G3DSA:3.30.565.10 174 329 1.1E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c13520 0175d1d92b2cc1882060c4e13e5683b0 249 Pfam PF00005 ABC transporter 19 174 8.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c13520 0175d1d92b2cc1882060c4e13e5683b0 249 SUPERFAMILY SSF52540 3 236 1.18E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13520 0175d1d92b2cc1882060c4e13e5683b0 249 SMART SM00382 28 229 5.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c13520 0175d1d92b2cc1882060c4e13e5683b0 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 6.5E-130 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CLSA_c13520 0175d1d92b2cc1882060c4e13e5683b0 249 Gene3D G3DSA:3.40.50.300 1 247 4.4E-65 T 12-10-2018 CLSA_c13520 0175d1d92b2cc1882060c4e13e5683b0 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c20280 2b4853ad869161f707d9d72802a2bf41 282 Gene3D G3DSA:1.10.1200.110 249 282 3.8E-20 T 12-10-2018 CLSA_c20280 2b4853ad869161f707d9d72802a2bf41 282 SUPERFAMILY SSF52266 2 271 2.16E-81 T 12-10-2018 CLSA_c20280 2b4853ad869161f707d9d72802a2bf41 282 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 5 224 3.5E-51 T 12-10-2018 IPR005181 Sialate O-acetylesterase domain CLSA_c20280 2b4853ad869161f707d9d72802a2bf41 282 Gene3D G3DSA:3.40.50.1110 1 248 1.2E-92 T 12-10-2018 IPR036514 SGNH hydrolase superfamily CLSA_c06190 a2c5516fcad9c5b5fba6685fb0a5822b 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 85 5.0E-26 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CLSA_c06190 a2c5516fcad9c5b5fba6685fb0a5822b 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 84 2.9E-24 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CLSA_c06190 a2c5516fcad9c5b5fba6685fb0a5822b 89 SUPERFAMILY SSF55229 30 86 2.22E-12 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CLSA_c06190 a2c5516fcad9c5b5fba6685fb0a5822b 89 Gene3D G3DSA:3.30.1070.10 17 84 2.1E-16 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CLSA_c06190 a2c5516fcad9c5b5fba6685fb0a5822b 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 15.942 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 309 319 - T 12-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 Pfam PF00331 Glycosyl hydrolase family 10 41 390 2.8E-72 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 SUPERFAMILY SSF50370 417 559 2.73E-30 T 12-10-2018 IPR035992 Ricin B-like lectins CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 417 495 1.0E-13 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 SUPERFAMILY SSF51445 48 392 1.93E-70 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 SMART SM00633 80 392 1.2E-65 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 SMART SM00458 420 559 8.3E-4 T 12-10-2018 IPR000772 Ricin B, lectin domain CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 Gene3D G3DSA:2.80.10.50 419 558 1.1E-24 T 12-10-2018 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 Gene3D G3DSA:3.20.20.80 34 404 4.8E-104 T 12-10-2018 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 PRINTS PR00134 Glycosyl hydrolase family 10 signature 249 260 1.0E-11 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 PRINTS PR00134 Glycosyl hydrolase family 10 signature 136 148 1.0E-11 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 PRINTS PR00134 Glycosyl hydrolase family 10 signature 192 203 1.0E-11 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06720 e84d74bbae68b4bd9a8df4278a879f07 562 PRINTS PR00134 Glycosyl hydrolase family 10 signature 275 287 1.0E-11 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c05940 7082048de7e165c06b732be2248f1bd9 377 Pfam PF00149 Calcineurin-like phosphoesterase 4 170 1.3E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c05940 7082048de7e165c06b732be2248f1bd9 377 Gene3D G3DSA:3.60.21.10 2 244 8.3E-45 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c05940 7082048de7e165c06b732be2248f1bd9 377 SUPERFAMILY SSF56300 4 288 2.63E-44 T 12-10-2018 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 281 6.9E-73 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 SUPERFAMILY SSF52943 4 281 8.5E-72 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 Pfam PF00231 ATP synthase 6 281 4.7E-78 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.2E-30 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 PRINTS PR00126 ATP synthase gamma subunit signature 260 281 4.2E-30 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 4.2E-30 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 PRINTS PR00126 ATP synthase gamma subunit signature 229 248 4.2E-30 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 Gene3D G3DSA:1.10.287.80 8 278 4.1E-79 T 12-10-2018 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 268 281 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 Gene3D G3DSA:3.40.1380.10 63 201 4.1E-79 T 12-10-2018 CLSA_c05140 cc617f217db6e78298dbc0fcdcee436b 283 Hamap MF_00815 ATP synthase gamma chain [atpG]. 3 282 28.357 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 8.0E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 Gene3D G3DSA:1.20.5.1150 16 58 5.3E-19 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.2E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 Pfam PF01165 Ribosomal protein S21 4 57 1.1E-24 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 1.4E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.204 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c10930 adacee04ef8fcae9ecb3ee6fbc6aa2fe 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Gene3D G3DSA:3.30.70.1560 209 278 2.8E-17 T 12-10-2018 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Pfam PF01479 S4 domain 1 33 6.6E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 SUPERFAMILY SSF55120 59 295 2.88E-34 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Gene3D G3DSA:3.30.70.580 279 295 2.8E-17 T 12-10-2018 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Pfam PF00849 RNA pseudouridylate synthase 60 258 1.5E-16 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Gene3D G3DSA:3.10.290.10 1 52 9.9E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 291 7.5E-40 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 SMART SM00363 1 67 1.1E-4 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Gene3D G3DSA:3.30.70.1560 127 187 4.6E-7 T 12-10-2018 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 SUPERFAMILY SSF55174 1 54 1.81E-11 T 12-10-2018 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 95 109 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c28090 e8382ea5060fa3d39a8f518099dac3c0 320 Gene3D G3DSA:3.30.70.580 53 126 2.4E-19 T 12-10-2018 CLSA_c40210 ec10874732ac0f76f6270010e5b1e1de 62 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 19 28 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c40210 ec10874732ac0f76f6270010e5b1e1de 62 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 40 54 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c40210 ec10874732ac0f76f6270010e5b1e1de 62 Gene3D G3DSA:1.10.8.910 4 62 2.1E-24 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c40210 ec10874732ac0f76f6270010e5b1e1de 62 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 59 1.1E-25 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 Gene3D G3DSA:2.40.40.20 1 123 1.5E-57 T 12-10-2018 CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 SUPERFAMILY SSF50692 1 121 5.38E-53 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 124 76.615 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 Pfam PF02261 Aspartate decarboxylase 1 114 6.1E-57 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 PIRSF PIRSF006246 1 124 3.8E-57 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 114 3.0E-35 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLSA_c22700 8e0017a0f10e03a0b45b46c1fbb549c0 124 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 3.9E-57 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLSA_c32130 b326ef41096a153ced56d5cd38b13ac6 319 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 166 303 5.3E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLSA_c32130 b326ef41096a153ced56d5cd38b13ac6 319 Gene3D G3DSA:1.10.530.10 159 299 2.2E-41 T 12-10-2018 CLSA_c32130 b326ef41096a153ced56d5cd38b13ac6 319 Gene3D G3DSA:2.10.70.40 193 238 2.2E-41 T 12-10-2018 CLSA_c32130 b326ef41096a153ced56d5cd38b13ac6 319 SMART SM00047 148 310 1.7E-31 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 Pfam PF03466 LysR substrate binding domain 91 290 1.9E-33 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 SUPERFAMILY SSF53850 88 291 9.91E-31 T 12-10-2018 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 Gene3D G3DSA:1.10.10.10 4 94 3.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 Gene3D G3DSA:3.40.190.290 95 295 1.0E-39 T 12-10-2018 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.4E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c25230 433b1d1c916bacd0d8c33c6c9f4cd23d 299 SUPERFAMILY SSF46785 4 114 1.16E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 Gene3D G3DSA:1.10.287.950 360 661 2.3E-58 T 12-10-2018 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 SMART SM00283 386 661 5.4E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 613 1.7E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 Gene3D G3DSA:1.20.1480.50 270 359 8.1E-11 T 12-10-2018 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 SMART SM00304 305 357 9.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 Gene3D G3DSA:3.30.450.20 151 269 2.4E-17 T 12-10-2018 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 Pfam PF02743 Cache domain 37 264 7.8E-28 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c37300 257b7661116c319883a05ca01a801bfb 663 SUPERFAMILY SSF58104 325 661 7.32E-62 T 12-10-2018 CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 SMART SM00871 133 278 2.7E-15 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 Pfam PF12833 Helix-turn-helix domain 31 106 7.5E-11 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 SUPERFAMILY SSF55136 135 278 4.19E-22 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 Gene3D G3DSA:3.20.80.10 134 278 4.3E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 Gene3D G3DSA:1.10.10.60 3 59 1.1E-16 T 12-10-2018 CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 Gene3D G3DSA:1.10.10.60 60 118 9.4E-7 T 12-10-2018 CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 SUPERFAMILY SSF46689 7 56 2.22E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 Pfam PF06445 GyrI-like small molecule binding domain 134 278 2.6E-19 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain CLSA_c19960 099e03a7494a17d5bfec7baa373de7fc 278 SMART SM00342 22 105 1.2E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 Gene3D G3DSA:1.10.10.10 225 297 6.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 PRINTS PR00502 NUDIX hydrolase family signature 82 97 4.5E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 PRINTS PR00502 NUDIX hydrolase family signature 68 82 4.5E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 SUPERFAMILY SSF46785 231 293 1.5E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 Gene3D G3DSA:3.90.79.10 23 224 3.4E-40 T 12-10-2018 CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 SUPERFAMILY SSF55811 13 229 9.07E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 Pfam PF00293 NUDIX domain 52 147 2.4E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 PIRSF PIRSF019423 46 147 2.2E-7 T 12-10-2018 IPR011213 Nicotinic acid mononucleotide biosynthesis protein CLSA_c15770 d315746183a4eb4e403c2c2d91c9a42b 297 PIRSF PIRSF019423 131 296 4.8E-18 T 12-10-2018 IPR011213 Nicotinic acid mononucleotide biosynthesis protein CLSA_c29600 1915c2fc90894bfe02cf184fe33e1fd4 34 Pfam PF14057 GGGtGRT protein 2 30 5.3E-13 T 12-10-2018 IPR025964 GGGtGRT protein CLSA_c39730 a36f0b54cca472b4fbc6fa3cb8689216 136 SUPERFAMILY SSF140566 1 119 3.14E-13 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 CLSA_c39730 a36f0b54cca472b4fbc6fa3cb8689216 136 Pfam PF05130 FlgN protein 1 135 3.7E-22 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 Pfam PF01345 Domain of unknown function DUF11 333 419 2.2E-9 T 12-10-2018 IPR001434 Domain of unknown function DUF11 CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 Gene3D G3DSA:2.60.40.1080 191 271 4.3E-21 T 12-10-2018 CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 Gene3D G3DSA:2.60.120.260 44 188 3.1E-6 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 Pfam PF02368 Bacterial Ig-like domain (group 2) 195 265 6.0E-16 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 SUPERFAMILY SSF49373 192 269 5.1E-18 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 SMART SM00635 192 266 1.3E-13 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c22910 b5199616c4d76e5a0c1c8caa0570a293 421 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 335 383 6.0E-10 T 12-10-2018 IPR001434 Domain of unknown function DUF11 CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 Pfam PF04542 Sigma-70 region 2 14 79 1.9E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 SUPERFAMILY SSF88946 7 88 3.77E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 Gene3D G3DSA:1.10.10.10 107 168 1.7E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 35 65 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 Gene3D G3DSA:1.10.1740.10 3 106 9.3E-20 T 12-10-2018 CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 SUPERFAMILY SSF88659 98 167 1.46E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c24400 44fcd1d01eca3d44000928d7b4e1b7fc 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 164 1.2E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 Pfam PF00072 Response regulator receiver domain 5 114 3.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 Gene3D G3DSA:1.10.10.10 128 224 8.6E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 SMART SM00448 3 114 1.4E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 3.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 Gene3D G3DSA:3.40.50.2300 1 127 1.3E-36 T 12-10-2018 CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 SUPERFAMILY SSF52172 3 171 1.99E-41 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c32380 5a5d68352733c2368ec4611f0875a4bb 225 SMART SM00862 147 220 5.1E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 PIRSF PIRSF011572 1 258 6.8E-120 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 Pfam PF06018 CodY GAF-like domain 3 179 4.0E-69 T 12-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 SUPERFAMILY SSF46785 168 257 5.04E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 Pfam PF08222 CodY helix-turn-helix domain 199 258 4.3E-35 T 12-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 258 140.03 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 Gene3D G3DSA:1.10.10.10 165 258 2.4E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 Gene3D G3DSA:3.30.450.40 2 164 1.9E-60 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c14090 cedcce18ad412b500046aa5e54ad9fd8 258 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 254 2.8E-114 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 283 4.1E-19 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 SUPERFAMILY SSF160240 206 285 2.62E-17 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 Pfam PF01545 Cation efflux family 9 202 2.6E-51 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 Gene3D G3DSA:1.20.1510.10 4 201 5.7E-65 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 SUPERFAMILY SSF161111 3 203 3.4E-59 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 285 1.0E-73 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c27750 7f6820b238619a411fdcd1e97a56b6c3 300 Gene3D G3DSA:3.30.70.1350 202 288 1.3E-21 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c13230 783a029a01b6d9d0b2b9467d69bb1439 143 TIGRFAM TIGR03419 NifU_clost: FeS cluster assembly scaffold protein NifU 3 122 5.0E-71 T 12-10-2018 IPR017787 NIF system FeS cluster assembly, NifU-like CLSA_c13230 783a029a01b6d9d0b2b9467d69bb1439 143 SUPERFAMILY SSF82649 5 123 3.92E-48 T 12-10-2018 CLSA_c13230 783a029a01b6d9d0b2b9467d69bb1439 143 Gene3D G3DSA:3.90.1010.10 2 142 2.1E-61 T 12-10-2018 CLSA_c13230 783a029a01b6d9d0b2b9467d69bb1439 143 Pfam PF01592 NifU-like N terminal domain 3 122 8.3E-51 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CLSA_c05110 41b7866d3e3bad5b90f62e24f2c75d4d 159 Hamap MF_01398 ATP synthase subunit b [atpF]. 2 139 12.304 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLSA_c05110 41b7866d3e3bad5b90f62e24f2c75d4d 159 Pfam PF00430 ATP synthase B/B' CF(0) 7 135 1.1E-24 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLSA_c05110 41b7866d3e3bad5b90f62e24f2c75d4d 159 Gene3D G3DSA:1.20.5.620 61 140 4.5E-5 T 12-10-2018 CLSA_c05110 41b7866d3e3bad5b90f62e24f2c75d4d 159 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 13 157 1.7E-28 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CLSA_c05110 41b7866d3e3bad5b90f62e24f2c75d4d 159 SUPERFAMILY SSF81573 63 122 2.48E-6 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 SUPERFAMILY SSF50022 390 479 4.71E-21 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 Gene3D G3DSA:3.50.50.60 24 355 3.8E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 Gene3D G3DSA:2.102.10.10 383 481 1.8E-21 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 SUPERFAMILY SSF51905 21 361 1.17E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 Pfam PF01266 FAD dependent oxidoreductase 24 354 2.8E-40 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 Gene3D G3DSA:3.30.9.10 117 313 3.8E-41 T 12-10-2018 CLSA_c30420 6ea0dee6256b39a146caf3bde6290ccf 481 Pfam PF00355 Rieske [2Fe-2S] domain 413 479 3.6E-13 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 SMART SM00283 293 569 7.7E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 5.2E-34 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 Gene3D G3DSA:1.20.1480.50 172 269 1.7E-8 T 12-10-2018 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 3.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 3.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 3.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 3.1E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 520 1.4E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 Gene3D G3DSA:1.10.287.950 270 569 3.1E-60 T 12-10-2018 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 SUPERFAMILY SSF58104 232 569 5.14E-59 T 12-10-2018 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 SMART SM00304 212 264 0.023 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36770 118c3e30f2788b38edc61f6001e0a533 570 SMART SM00304 503 556 38.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 SUPERFAMILY SSF46785 2 58 1.08E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 SMART SM00420 5 57 2.9E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 SUPERFAMILY SSF100950 74 232 3.6E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 Gene3D G3DSA:3.30.750.70 69 146 4.1E-5 T 12-10-2018 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 SMART SM01134 71 232 7.6E-64 T 12-10-2018 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 5.2E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c12090 2e601ce9157657e7f51c9010c3b520fb 257 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.6E-48 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c13790 de65eb60311db0e572315aff803eb582 677 SUPERFAMILY SSF52540 171 434 3.69E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13790 de65eb60311db0e572315aff803eb582 677 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 643 4.3E-218 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CLSA_c13790 de65eb60311db0e572315aff803eb582 677 Pfam PF00271 Helicase conserved C-terminal domain 458 569 2.1E-19 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c13790 de65eb60311db0e572315aff803eb582 677 Gene3D G3DSA:3.40.50.300 193 431 4.3E-83 T 12-10-2018 CLSA_c13790 de65eb60311db0e572315aff803eb582 677 SMART SM00487 250 440 3.0E-38 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c13790 de65eb60311db0e572315aff803eb582 677 SMART SM00490 485 570 2.0E-22 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c13790 de65eb60311db0e572315aff803eb582 677 Gene3D G3DSA:3.40.50.300 438 610 1.9E-56 T 12-10-2018 CLSA_c13790 de65eb60311db0e572315aff803eb582 677 Gene3D G3DSA:2.40.50.140 47 138 2.0E-7 T 12-10-2018 CLSA_c13790 de65eb60311db0e572315aff803eb582 677 SUPERFAMILY SSF50249 2 167 1.71E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c13790 de65eb60311db0e572315aff803eb582 677 Pfam PF17191 RecG wedge domain 7 167 1.7E-19 T 12-10-2018 IPR033454 RecG, wedge domain CLSA_c13790 de65eb60311db0e572315aff803eb582 677 Pfam PF00270 DEAD/DEAH box helicase 257 414 4.0E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c13790 de65eb60311db0e572315aff803eb582 677 SUPERFAMILY SSF52540 373 580 9.02E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20070 a0caed40dbabfd64cba591d80b85991a 152 SMART SM00260 3 144 8.6E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20070 a0caed40dbabfd64cba591d80b85991a 152 Pfam PF01584 CheW-like domain 7 144 7.5E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c20070 a0caed40dbabfd64cba591d80b85991a 152 Gene3D G3DSA:2.30.30.40 9 138 2.0E-43 T 12-10-2018 CLSA_c20070 a0caed40dbabfd64cba591d80b85991a 152 SUPERFAMILY SSF50341 5 148 1.96E-36 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c20070 a0caed40dbabfd64cba591d80b85991a 152 Gene3D G3DSA:2.40.50.180 26 96 2.0E-43 T 12-10-2018 CLSA_c44210 b525da45eee467f62adc2ae76efe694d 391 Gene3D G3DSA:3.40.50.150 114 380 1.5E-100 T 12-10-2018 CLSA_c44210 b525da45eee467f62adc2ae76efe694d 391 SUPERFAMILY SSF53335 3 331 2.79E-81 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c44210 b525da45eee467f62adc2ae76efe694d 391 PIRSF PIRSF003085 6 391 2.8E-131 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CLSA_c44210 b525da45eee467f62adc2ae76efe694d 391 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 372 4.9E-101 T 12-10-2018 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 338 9.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 SMART SM00387 230 340 1.9E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 295 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 281 1.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 Gene3D G3DSA:1.10.287.130 112 185 8.9E-10 T 12-10-2018 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 184 3.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 SMART SM00388 119 185 7.6E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 SUPERFAMILY SSF47384 105 184 7.06E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 Gene3D G3DSA:3.30.565.10 186 341 2.4E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20150 81760dd1e0ce53db4bc8d8a5d0b71a76 342 SUPERFAMILY SSF55874 175 338 8.64E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 Pfam PF00488 MutS domain V 342 527 2.7E-26 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 Gene3D G3DSA:3.40.50.300 305 529 1.2E-47 T 12-10-2018 CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 Gene3D G3DSA:1.10.1420.10 64 161 3.3E-6 T 12-10-2018 CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 Pfam PF05192 MutS domain III 63 295 5.8E-7 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 SUPERFAMILY SSF48334 64 297 1.31E-12 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 SMART SM00533 58 329 4.6E-4 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 SUPERFAMILY SSF52540 305 528 2.52E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06970 400d2dcc53ed35deeb5decc99d487b4c 530 SMART SM00534 338 524 5.5E-10 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 SUPERFAMILY SSF55785 20 141 1.12E-12 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 Gene3D G3DSA:1.10.10.10 169 267 6.5E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 SUPERFAMILY SSF48452 293 412 1.26E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 Pfam PF03704 Bacterial transcriptional activator domain 289 410 1.2E-9 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 Gene3D G3DSA:3.30.450.20 5 167 6.2E-18 T 12-10-2018 CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 Pfam PF00989 PAS fold 17 136 5.4E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 SMART SM01043 272 411 1.1E-6 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 SUPERFAMILY SSF46894 174 253 1.56E-9 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 146 2.0E-11 T 12-10-2018 IPR000014 PAS domain CLSA_c42590 d7339d46e84d1ab42f919038a2b10149 414 Gene3D G3DSA:1.25.40.10 272 414 3.7E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 290 2.2E-67 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 Gene3D G3DSA:3.40.50.1100 45 143 5.3E-116 T 12-10-2018 CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 Gene3D G3DSA:3.40.50.1100 5 298 5.3E-116 T 12-10-2018 CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 302 1.1E-125 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 SUPERFAMILY SSF53686 2 301 1.06E-98 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLSA_c40550 2fcb6290bfc3add2659ab8391afab150 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 302 2.7E-123 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 SUPERFAMILY SSF54631 70 206 7.91E-23 T 12-10-2018 CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 SUPERFAMILY SSF46785 2 79 1.93E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 Pfam PF08279 HTH domain 6 57 2.6E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 Pfam PF00571 CBS domain 143 203 2.3E-6 T 12-10-2018 IPR000644 CBS domain CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 Pfam PF00571 CBS domain 77 127 1.9E-4 T 12-10-2018 IPR000644 CBS domain CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 Gene3D G3DSA:3.10.580.10 61 212 1.1E-49 T 12-10-2018 CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 PIRSF PIRSF026546 1 211 4.8E-93 T 12-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 Gene3D G3DSA:1.10.10.10 1 60 7.6E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 SMART SM00116 149 205 0.5 T 12-10-2018 IPR000644 CBS domain CLSA_c11030 8b03972fa010701baea1fcdc530ecc52 212 SMART SM00116 83 130 1.0 T 12-10-2018 IPR000644 CBS domain CLSA_c33120 96a1ef5b2a28e7f0bf75d581b93c3b2c 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 132 3.0E-28 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLSA_c33120 96a1ef5b2a28e7f0bf75d581b93c3b2c 137 SUPERFAMILY SSF47188 1 133 8.5E-25 T 12-10-2018 IPR035938 Hemerythrin-like superfamily CLSA_c33120 96a1ef5b2a28e7f0bf75d581b93c3b2c 137 Pfam PF01814 Hemerythrin HHE cation binding domain 14 131 5.7E-8 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CLSA_c33120 96a1ef5b2a28e7f0bf75d581b93c3b2c 137 Gene3D G3DSA:1.20.120.50 1 136 6.5E-32 T 12-10-2018 IPR035938 Hemerythrin-like superfamily CLSA_c11060 49f32fdd13cec7c23cae50de0c4bd69b 342 SMART SM00471 71 198 1.2E-11 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c11060 49f32fdd13cec7c23cae50de0c4bd69b 342 Gene3D G3DSA:1.10.3210.10 1 335 1.2E-95 T 12-10-2018 CLSA_c11060 49f32fdd13cec7c23cae50de0c4bd69b 342 Pfam PF01966 HD domain 75 188 2.2E-16 T 12-10-2018 IPR006674 HD domain CLSA_c11060 49f32fdd13cec7c23cae50de0c4bd69b 342 Pfam PF13286 Phosphohydrolase-associated domain 246 332 4.5E-17 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain CLSA_c11060 49f32fdd13cec7c23cae50de0c4bd69b 342 SUPERFAMILY SSF109604 27 338 9.16E-72 T 12-10-2018 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 SUPERFAMILY SSF46689 182 233 2.42E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 Pfam PF12833 Helix-turn-helix domain 205 280 1.3E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 277 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 SMART SM00342 199 281 9.4E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 Gene3D G3DSA:1.10.10.60 233 281 3.4E-11 T 12-10-2018 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 Gene3D G3DSA:1.10.10.60 176 232 1.6E-16 T 12-10-2018 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 SUPERFAMILY SSF51215 25 165 1.44E-16 T 12-10-2018 IPR037923 Transcription regulator HTH-like CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 Pfam PF02311 AraC-like ligand binding domain 21 160 2.2E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 Gene3D G3DSA:2.60.120.10 3 103 1.0E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c31480 2bc627df30e1191080ba9d6698b1d4d2 281 SUPERFAMILY SSF46689 236 280 3.58E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c23680 4c51cb8cb35df14718bcfc1b8265e588 442 Pfam PF13751 Transposase DDE domain 312 436 5.2E-15 T 12-10-2018 IPR025668 Transposase DDE domain CLSA_c23680 4c51cb8cb35df14718bcfc1b8265e588 442 Pfam PF05598 Transposase domain (DUF772) 9 82 8.5E-18 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c27390 2e7110d49905f28ff004307858783101 260 Pfam PF00588 SpoU rRNA Methylase family 113 252 1.6E-37 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLSA_c27390 2e7110d49905f28ff004307858783101 260 SUPERFAMILY SSF55315 3 101 1.07E-20 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like CLSA_c27390 2e7110d49905f28ff004307858783101 260 Gene3D G3DSA:3.30.1330.30 2 102 1.9E-22 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like CLSA_c27390 2e7110d49905f28ff004307858783101 260 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 101 1.5E-11 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CLSA_c27390 2e7110d49905f28ff004307858783101 260 Gene3D G3DSA:3.40.1280.10 108 260 2.2E-53 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLSA_c27390 2e7110d49905f28ff004307858783101 260 SUPERFAMILY SSF75217 110 257 1.44E-42 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases CLSA_c27390 2e7110d49905f28ff004307858783101 260 SMART SM00967 31 105 1.2E-8 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CLSA_c09930 c7e9e6472436535644df28041d232665 100 SUPERFAMILY SSF52794 1 96 1.02E-34 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c09930 c7e9e6472436535644df28041d232665 100 Gene3D G3DSA:3.40.50.2300 1 100 3.3E-37 T 12-10-2018 CLSA_c09930 c7e9e6472436535644df28041d232665 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 93 5.7E-24 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c31410 195dd2415dbd3802e4374875a98d51c6 165 Gene3D G3DSA:1.10.3210.10 1 160 8.1E-20 T 12-10-2018 CLSA_c31410 195dd2415dbd3802e4374875a98d51c6 165 Pfam PF01966 HD domain 22 114 3.8E-6 T 12-10-2018 IPR006674 HD domain CLSA_c31410 195dd2415dbd3802e4374875a98d51c6 165 SUPERFAMILY SSF109604 3 156 1.08E-27 T 12-10-2018 CLSA_c39580 8e96aec856719738883cf34f702b3fc8 436 Gene3D G3DSA:3.90.1150.10 269 432 7.2E-43 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c39580 8e96aec856719738883cf34f702b3fc8 436 Gene3D G3DSA:3.40.640.10 5 268 3.8E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c39580 8e96aec856719738883cf34f702b3fc8 436 PIRSF PIRSF000390 14 431 1.7E-87 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c39580 8e96aec856719738883cf34f702b3fc8 436 SUPERFAMILY SSF53383 15 427 8.07E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c39580 8e96aec856719738883cf34f702b3fc8 436 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 24 423 2.6E-92 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 SUPERFAMILY SSF51556 57 347 2.58E-73 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 3 390 9.7E-175 T 12-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 SUPERFAMILY SSF51338 2 390 4.0E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 Gene3D G3DSA:2.30.40.10 4 390 6.0E-149 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 Pfam PF01979 Amidohydrolase family 256 375 1.0E-9 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 Gene3D G3DSA:3.20.20.140 58 343 6.0E-149 T 12-10-2018 CLSA_c02500 03493448b29e829041dfcc83bacd9ad2 391 PIRSF PIRSF001238 1 391 1.3E-158 T 12-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 SMART SM01230 164 449 6.3E-57 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 Gene3D G3DSA:1.20.120.1560 552 696 9.8E-44 T 12-10-2018 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 Pfam PF00120 Glutamine synthetase, catalytic domain 184 357 7.5E-22 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 Gene3D G3DSA:3.30.590.10 172 413 2.5E-30 T 12-10-2018 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 SUPERFAMILY SSF55931 154 572 6.47E-77 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 309 324 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CLSA_c25660 37f32a272477d1716a565328fb1fc1e5 697 Pfam PF12437 Glutamine synthetase type III N terminal 5 163 3.8E-82 T 12-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 407 4.4E-25 T 12-10-2018 IPR000160 GGDEF domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Gene3D G3DSA:1.10.3210.10 406 591 1.1E-67 T 12-10-2018 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SUPERFAMILY SSF109604 416 588 4.83E-37 T 12-10-2018 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 252 8.9E-12 T 12-10-2018 IPR000014 PAS domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 121 1.6E-8 T 12-10-2018 IPR000014 PAS domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Pfam PF08448 PAS fold 14 118 1.6E-9 T 12-10-2018 IPR013656 PAS fold-4 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Pfam PF08448 PAS fold 136 246 3.7E-14 T 12-10-2018 IPR013656 PAS fold-4 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SUPERFAMILY SSF55785 14 119 1.55E-12 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SUPERFAMILY SSF55785 114 243 2.09E-15 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Gene3D G3DSA:3.30.70.270 252 405 1.3E-32 T 12-10-2018 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SMART SM00091 129 197 3.0 T 12-10-2018 IPR000014 PAS domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SMART SM00091 8 74 2.1 T 12-10-2018 IPR000014 PAS domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Pfam PF13487 HD domain 477 539 1.8E-18 T 12-10-2018 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SUPERFAMILY SSF55073 261 404 1.1E-26 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 401 1.0E-25 T 12-10-2018 IPR000160 GGDEF domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Gene3D G3DSA:3.30.450.20 126 251 8.4E-22 T 12-10-2018 CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SMART SM00471 422 557 1.7E-7 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 SMART SM00267 245 408 1.3E-21 T 12-10-2018 IPR000160 GGDEF domain CLSA_c38850 ed306f857f23874ffe90d0e339a0ae94 592 Gene3D G3DSA:3.30.450.20 6 125 3.5E-13 T 12-10-2018 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 PRINTS PR00471 Acetate kinase family signature 274 287 1.3E-19 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 PRINTS PR00471 Acetate kinase family signature 179 200 1.3E-19 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 PRINTS PR00471 Acetate kinase family signature 5 16 1.3E-19 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 PRINTS PR00471 Acetate kinase family signature 149 162 1.3E-19 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 PRINTS PR00471 Acetate kinase family signature 297 313 1.3E-19 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 SUPERFAMILY SSF53067 3 172 3.32E-71 T 12-10-2018 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 Hamap MF_00542 Probable butyrate kinase [buk]. 1 355 165.917 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 Pfam PF00871 Acetokinase family 4 354 7.4E-105 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 4 353 9.9E-165 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 Gene3D G3DSA:3.30.420.40 137 332 4.7E-151 T 12-10-2018 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 Gene3D G3DSA:3.30.420.40 5 355 4.7E-151 T 12-10-2018 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 179 196 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 SUPERFAMILY SSF53067 119 348 3.84E-53 T 12-10-2018 CLSA_c02580 ccad4753d88d38d1bae93d0dd0c61cf3 355 PIRSF PIRSF036458 1 355 3.4E-172 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLSA_c03150 7722702717acd77ae1f2588dd5ffcc68 571 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 181 1.7E-31 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c03150 7722702717acd77ae1f2588dd5ffcc68 571 SMART SM00283 300 562 4.0E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c03150 7722702717acd77ae1f2588dd5ffcc68 571 Gene3D G3DSA:1.20.1480.50 171 266 1.8E-6 T 12-10-2018 CLSA_c03150 7722702717acd77ae1f2588dd5ffcc68 571 Gene3D G3DSA:1.10.287.950 267 569 9.3E-53 T 12-10-2018 CLSA_c03150 7722702717acd77ae1f2588dd5ffcc68 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 525 2.4E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c03150 7722702717acd77ae1f2588dd5ffcc68 571 SUPERFAMILY SSF58104 232 569 1.57E-55 T 12-10-2018 CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 Pfam PF04542 Sigma-70 region 2 21 87 4.1E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 Gene3D G3DSA:1.10.1740.10 1 98 8.0E-19 T 12-10-2018 CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 SUPERFAMILY SSF88659 109 173 1.29E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 SUPERFAMILY SSF88946 3 94 2.2E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 Gene3D G3DSA:1.10.10.10 99 176 6.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 ProSitePatterns PS00622 LuxR-type HTH domain signature. 142 169 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 Pfam PF08281 Sigma-70, region 4 119 170 2.7E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c30400 fa125d544673ae6802c8e8b129f4ae7b 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 173 1.9E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c16040 26d738a2b3f629098d8a364dcef1041d 142 SUPERFAMILY SSF55729 6 135 4.77E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c16040 26d738a2b3f629098d8a364dcef1041d 142 Gene3D G3DSA:3.40.630.30 6 134 1.8E-17 T 12-10-2018 CLSA_c00750 4176249a04e114ad230f405c585f5617 350 Pfam PF03990 Domain of unknown function (DUF348) 46 85 1.2E-12 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CLSA_c00750 4176249a04e114ad230f405c585f5617 350 Pfam PF03990 Domain of unknown function (DUF348) 102 150 1.3E-9 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CLSA_c00750 4176249a04e114ad230f405c585f5617 350 SMART SM01208 163 241 1.0E-24 T 12-10-2018 IPR011098 G5 domain CLSA_c00750 4176249a04e114ad230f405c585f5617 350 Pfam PF07501 G5 domain 166 239 4.2E-20 T 12-10-2018 IPR011098 G5 domain CLSA_c00750 4176249a04e114ad230f405c585f5617 350 Gene3D G3DSA:2.20.230.10 141 241 2.6E-19 T 12-10-2018 CLSA_c00750 4176249a04e114ad230f405c585f5617 350 Gene3D G3DSA:2.40.40.10 255 330 1.5E-5 T 12-10-2018 IPR036908 RlpA-like domain superfamily CLSA_c00750 4176249a04e114ad230f405c585f5617 350 SUPERFAMILY SSF50685 273 335 9.42E-10 T 12-10-2018 IPR036908 RlpA-like domain superfamily CLSA_c00750 4176249a04e114ad230f405c585f5617 350 Pfam PF06725 3D domain 284 344 3.0E-22 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 Gene3D G3DSA:1.10.260.40 1 60 4.0E-22 T 12-10-2018 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 Gene3D G3DSA:3.40.50.2300 63 326 8.5E-69 T 12-10-2018 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 SUPERFAMILY SSF47413 2 60 8.58E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 SMART SM00354 2 72 5.9E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.2E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 Pfam PF13377 Periplasmic binding protein-like domain 172 334 3.2E-31 T 12-10-2018 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 Gene3D G3DSA:3.40.50.2300 163 331 8.5E-69 T 12-10-2018 CLSA_c08500 82f881ff8acb5c3228aceabc50b697dd 337 SUPERFAMILY SSF53822 62 335 8.83E-61 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c18840 a1659d7a0538dcc1a5020f32c794ea76 571 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 186 6.1E-38 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c18840 a1659d7a0538dcc1a5020f32c794ea76 571 SUPERFAMILY SSF58104 233 570 4.05E-60 T 12-10-2018 CLSA_c18840 a1659d7a0538dcc1a5020f32c794ea76 571 SMART SM00283 287 570 4.0E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18840 a1659d7a0538dcc1a5020f32c794ea76 571 SMART SM00304 213 265 1.2E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c18840 a1659d7a0538dcc1a5020f32c794ea76 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 521 3.9E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18840 a1659d7a0538dcc1a5020f32c794ea76 571 Gene3D G3DSA:1.10.287.950 237 570 9.2E-60 T 12-10-2018 CLSA_c04260 2301b88dc4320ad1d87ad12e0f07032f 313 Pfam PF01183 Glycosyl hydrolases family 25 12 208 3.1E-27 T 12-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CLSA_c04260 2301b88dc4320ad1d87ad12e0f07032f 313 Gene3D G3DSA:2.60.40.10 227 313 1.3E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c04260 2301b88dc4320ad1d87ad12e0f07032f 313 Gene3D G3DSA:3.20.20.80 1 225 5.8E-69 T 12-10-2018 CLSA_c04260 2301b88dc4320ad1d87ad12e0f07032f 313 SUPERFAMILY SSF51445 7 221 1.16E-36 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c23300 2b17fcf00db176fe2678dbdd9fd8453c 109 SUPERFAMILY SSF52172 1 107 1.38E-31 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c23300 2b17fcf00db176fe2678dbdd9fd8453c 109 Pfam PF00072 Response regulator receiver domain 1 102 3.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23300 2b17fcf00db176fe2678dbdd9fd8453c 109 SMART SM00448 1 102 2.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23300 2b17fcf00db176fe2678dbdd9fd8453c 109 Gene3D G3DSA:3.20.20.70 11 108 1.4E-33 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 SMART SM00283 396 671 3.1E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 Gene3D G3DSA:3.30.450.20 157 279 1.3E-27 T 12-10-2018 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 Pfam PF02743 Cache domain 37 278 8.4E-31 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 Gene3D G3DSA:1.20.1480.50 280 368 2.8E-14 T 12-10-2018 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 Gene3D G3DSA:1.10.287.950 369 671 2.2E-63 T 12-10-2018 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 SMART SM00304 315 367 3.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 625 2.0E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 SUPERFAMILY SSF58104 335 671 6.93E-69 T 12-10-2018 CLSA_c10200 46512ff06774a64b714e4c2a41817256 672 Pfam PF00672 HAMP domain 315 362 2.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c12930 c7243307ddb80e08b9e212393cd755a0 213 SUPERFAMILY SSF161098 9 202 1.44E-43 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c12930 c7243307ddb80e08b9e212393cd755a0 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 1.6E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CLSA_c12930 c7243307ddb80e08b9e212393cd755a0 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 204 5.8E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c12930 c7243307ddb80e08b9e212393cd755a0 213 Gene3D G3DSA:1.10.3720.10 1 211 8.6E-51 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 Gene3D G3DSA:3.40.50.300 1 170 4.1E-47 T 12-10-2018 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 Hamap MF_00109 Shikimate kinase [aroK]. 2 159 24.305 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 PRINTS PR01100 Shikimate kinase family signature 56 64 2.6E-20 T 12-10-2018 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 PRINTS PR01100 Shikimate kinase family signature 74 83 2.6E-20 T 12-10-2018 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 PRINTS PR01100 Shikimate kinase family signature 29 42 2.6E-20 T 12-10-2018 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 PRINTS PR01100 Shikimate kinase family signature 5 20 2.6E-20 T 12-10-2018 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 PRINTS PR01100 Shikimate kinase family signature 95 112 2.6E-20 T 12-10-2018 CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 SUPERFAMILY SSF52540 2 161 1.68E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06860 dbe827df8f219fe8a2349ee9c271ea29 171 Pfam PF01202 Shikimate kinase 11 158 3.0E-39 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 Gene3D G3DSA:3.30.70.940 1 113 4.8E-44 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 4 172 22.363 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 Gene3D G3DSA:2.30.30.30 114 172 7.8E-19 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 SUPERFAMILY SSF82679 5 109 6.54E-40 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 PRINTS PR00338 Transcription termination factor NUSG signature 148 164 3.7E-12 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 PRINTS PR00338 Transcription termination factor NUSG signature 59 71 3.7E-12 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 PRINTS PR00338 Transcription termination factor NUSG signature 130 145 3.7E-12 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 SMART SM00738 4 112 2.0E-49 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 SUPERFAMILY SSF50104 116 172 8.62E-15 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 7 172 1.8E-53 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLSA_c01890 833a0536abde6dd45ebb0e4ecf0b00eb 173 Pfam PF02357 Transcription termination factor nusG 6 108 5.6E-30 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLSA_c41690 814297ddc14c9b0484ee768bcaa73678 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 246 7.5E-52 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CLSA_c41690 814297ddc14c9b0484ee768bcaa73678 320 Gene3D G3DSA:3.40.50.720 3 319 7.3E-94 T 12-10-2018 CLSA_c41690 814297ddc14c9b0484ee768bcaa73678 320 SUPERFAMILY SSF51735 1 316 4.92E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 Gene3D G3DSA:3.40.50.180 153 348 8.9E-77 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 Pfam PF00072 Response regulator receiver domain 6 109 2.9E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 Gene3D G3DSA:3.40.50.2300 1 130 2.4E-29 T 12-10-2018 CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 SUPERFAMILY SSF52172 1 129 2.13E-27 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 SUPERFAMILY SSF52738 159 346 2.09E-71 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 PIRSF PIRSF000876 1 348 1.8E-132 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 Pfam PF01339 CheB methylesterase 164 341 4.1E-63 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 347 39.191 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c20060 282cb0e4b9ef592ae5dfee6252567749 348 SMART SM00448 4 118 1.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 PRINTS PR01035 Tetracycline resistance protein signature 136 158 5.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 PRINTS PR01035 Tetracycline resistance protein signature 17 33 5.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 PRINTS PR01035 Tetracycline resistance protein signature 106 127 5.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 PRINTS PR01035 Tetracycline resistance protein signature 79 103 5.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 SUPERFAMILY SSF103473 5 393 1.48E-71 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 Gene3D G3DSA:1.20.1250.20 2 208 8.1E-43 T 12-10-2018 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 Gene3D G3DSA:1.20.1250.20 209 395 1.0E-30 T 12-10-2018 CLSA_c34110 5b14c15d7fe77a03cc3cdd050e2052c1 406 Pfam PF07690 Major Facilitator Superfamily 12 247 1.0E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c25220 20bcd425da29163c60d46764d2db2d83 329 SUPERFAMILY SSF52343 168 313 2.88E-11 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c25220 20bcd425da29163c60d46764d2db2d83 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 292 300 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLSA_c25220 20bcd425da29163c60d46764d2db2d83 329 SUPERFAMILY SSF63380 65 160 1.46E-11 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c25220 20bcd425da29163c60d46764d2db2d83 329 PIRSF PIRSF006816 62 315 2.2E-26 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c25220 20bcd425da29163c60d46764d2db2d83 329 Gene3D G3DSA:2.40.30.10 63 159 3.1E-7 T 12-10-2018 CLSA_c05650 d45bdd0254ecdd8fedc7dc4410f6fb52 195 Pfam PF07456 Heptaprenyl diphosphate synthase component I 32 177 2.4E-50 T 12-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I CLSA_c05650 d45bdd0254ecdd8fedc7dc4410f6fb52 195 Gene3D G3DSA:1.10.1760.20 13 190 2.6E-12 T 12-10-2018 CLSA_c05650 d45bdd0254ecdd8fedc7dc4410f6fb52 195 PIRSF PIRSF027391 18 194 4.5E-65 T 12-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I CLSA_c36910 7c2033aadbb90fa2940f2446171ae04d 67 SUPERFAMILY SSF47413 2 66 1.88E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c36910 7c2033aadbb90fa2940f2446171ae04d 67 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 66 2.6E-23 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c36910 7c2033aadbb90fa2940f2446171ae04d 67 Gene3D G3DSA:1.10.260.40 5 67 3.1E-10 T 12-10-2018 CLSA_c36910 7c2033aadbb90fa2940f2446171ae04d 67 SMART SM00530 6 62 1.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c07830 d49e423f5e368c22521dc5919f012d30 480 Pfam PF05954 Phage late control gene D protein (GPD) 71 174 3.8E-6 T 12-10-2018 CLSA_c07830 d49e423f5e368c22521dc5919f012d30 480 Gene3D G3DSA:2.30.110.50 52 100 2.4E-7 T 12-10-2018 CLSA_c07830 d49e423f5e368c22521dc5919f012d30 480 Gene3D G3DSA:3.55.50.10 101 168 2.4E-7 T 12-10-2018 CLSA_c07830 d49e423f5e368c22521dc5919f012d30 480 SUPERFAMILY SSF69279 14 175 3.4E-22 T 12-10-2018 CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 Gene3D G3DSA:1.10.10.10 131 227 8.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.1E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 SMART SM00448 3 113 3.8E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 Gene3D G3DSA:3.40.50.2300 1 130 2.6E-33 T 12-10-2018 CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 Pfam PF00072 Response regulator receiver domain 5 113 4.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 SUPERFAMILY SSF52172 4 175 3.17E-35 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20230 e73c69c08ebc76e3abf61e53f0e5b725 227 SMART SM00862 149 225 1.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c10940 a662d2ba67e13abd087d17e4fd9ca585 150 SUPERFAMILY SSF89095 4 148 4.5E-39 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CLSA_c10940 a662d2ba67e13abd087d17e4fd9ca585 150 Gene3D G3DSA:1.10.10.410 92 148 2.2E-22 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLSA_c10940 a662d2ba67e13abd087d17e4fd9ca585 150 Gene3D G3DSA:1.10.1510.10 1 91 1.7E-23 T 12-10-2018 CLSA_c10940 a662d2ba67e13abd087d17e4fd9ca585 150 Pfam PF09424 Yqey-like protein 5 147 1.4E-51 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 CLSA_c01660 e71af9a2545112175366036f84ad0b46 56 Pfam PF12838 4Fe-4S dicluster domain 8 52 4.7E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c01660 e71af9a2545112175366036f84ad0b46 56 PRINTS PR00354 7Fe ferredoxin signature 17 27 4.7E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CLSA_c01660 e71af9a2545112175366036f84ad0b46 56 PRINTS PR00354 7Fe ferredoxin signature 33 50 4.7E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CLSA_c01660 e71af9a2545112175366036f84ad0b46 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c01660 e71af9a2545112175366036f84ad0b46 56 Gene3D G3DSA:3.30.70.20 2 56 3.0E-23 T 12-10-2018 CLSA_c01660 e71af9a2545112175366036f84ad0b46 56 SUPERFAMILY SSF54862 1 53 1.15E-18 T 12-10-2018 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 SUPERFAMILY SSF55347 113 219 6.76E-32 T 12-10-2018 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 249 31.088 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 SUPERFAMILY SSF51735 1 250 5.75E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 249 6.3E-63 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 Gene3D G3DSA:3.30.360.10 113 217 2.0E-73 T 12-10-2018 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 PIRSF PIRSF000161 1 252 5.5E-79 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 Gene3D G3DSA:3.40.50.720 3 247 2.0E-73 T 12-10-2018 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 111 3.1E-22 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 114 248 3.5E-43 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27520 3029d96c4e1c45de7f12185e60592d18 252 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 136 153 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c41270 abe9d9de78088878dd610900d0ffd240 354 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 349 8.0E-110 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c41270 abe9d9de78088878dd610900d0ffd240 354 Gene3D G3DSA:3.40.50.2000 6 346 1.2E-123 T 12-10-2018 CLSA_c41270 abe9d9de78088878dd610900d0ffd240 354 SUPERFAMILY SSF53756 1 353 5.96E-107 T 12-10-2018 CLSA_c41270 abe9d9de78088878dd610900d0ffd240 354 Gene3D G3DSA:3.40.50.2000 183 336 1.2E-123 T 12-10-2018 CLSA_c41270 abe9d9de78088878dd610900d0ffd240 354 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 350 2.7E-95 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 Gene3D G3DSA:3.30.830.10 225 412 6.5E-26 T 12-10-2018 CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 SUPERFAMILY SSF63411 7 214 1.75E-55 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 SUPERFAMILY SSF63411 232 410 5.5E-24 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 Pfam PF05193 Peptidase M16 inactive domain 171 343 3.3E-25 T 12-10-2018 IPR007863 Peptidase M16, C-terminal CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 Gene3D G3DSA:3.30.830.10 9 218 9.7E-65 T 12-10-2018 CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 Pfam PF00675 Insulinase (Peptidase family M16) 19 160 1.1E-34 T 12-10-2018 IPR011765 Peptidase M16, N-terminal CLSA_c27880 c20ef8cfb53cf130894c52633e149c3a 413 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 38 61 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CLSA_c18240 7b71fd9861d2e2fe8cd8bb0995297c07 223 Gene3D G3DSA:3.30.559.10 3 126 3.6E-25 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CLSA_c18240 7b71fd9861d2e2fe8cd8bb0995297c07 223 Gene3D G3DSA:3.30.559.30 127 204 3.6E-25 T 12-10-2018 CLSA_c18240 7b71fd9861d2e2fe8cd8bb0995297c07 223 Pfam PF00668 Condensation domain 2 202 2.2E-24 T 12-10-2018 IPR001242 Condensation domain CLSA_c18240 7b71fd9861d2e2fe8cd8bb0995297c07 223 SUPERFAMILY SSF52777 2 142 1.22E-11 T 12-10-2018 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 436 1.6E-77 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 SUPERFAMILY SSF53633 3 278 2.87E-59 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 SUPERFAMILY SSF55021 287 380 6.11E-15 T 12-10-2018 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 Gene3D G3DSA:3.40.1160.10 1 278 2.8E-83 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 Pfam PF00696 Amino acid kinase family 3 264 1.3E-33 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 PIRSF PIRSF000726 1 437 1.5E-77 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 SUPERFAMILY SSF55021 364 437 1.88E-19 T 12-10-2018 CLSA_c11600 89971bb4f20fd46551dcbbb64b8b9caa 437 Gene3D G3DSA:3.30.2130.10 280 437 4.7E-57 T 12-10-2018 CLSA_c06400 835e4ef981e2943479cd66e6aa1a38e7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.0E-41 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06400 835e4ef981e2943479cd66e6aa1a38e7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.8E-38 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06400 835e4ef981e2943479cd66e6aa1a38e7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.623 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c06400 835e4ef981e2943479cd66e6aa1a38e7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c06400 835e4ef981e2943479cd66e6aa1a38e7 103 SUPERFAMILY SSF141091 1 102 6.67E-38 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c12550 381b03b963df71dcd38d3834f1e33e1a 235 Pfam PF04055 Radical SAM superfamily 23 177 1.4E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c12550 381b03b963df71dcd38d3834f1e33e1a 235 Gene3D G3DSA:3.20.20.70 1 235 1.2E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c12550 381b03b963df71dcd38d3834f1e33e1a 235 SUPERFAMILY SSF102114 23 225 2.16E-28 T 12-10-2018 CLSA_c12550 381b03b963df71dcd38d3834f1e33e1a 235 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 5 231 2.7E-97 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 CLSA_c12550 381b03b963df71dcd38d3834f1e33e1a 235 Pfam PF13353 4Fe-4S single cluster domain 15 124 6.9E-25 T 12-10-2018 CLSA_c12550 381b03b963df71dcd38d3834f1e33e1a 235 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLSA_c21080 d47498278bb7956ee04037e86bc11c9c 91 Gene3D G3DSA:1.20.58.1000 2 89 6.1E-27 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily CLSA_c21080 d47498278bb7956ee04037e86bc11c9c 91 Pfam PF02583 Metal-sensitive transcriptional repressor 9 84 2.7E-25 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 SUPERFAMILY SSF47323 315 464 1.03E-33 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 SUPERFAMILY SSF52374 2 310 2.09E-99 T 12-10-2018 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 Pfam PF09190 DALR domain 353 416 9.6E-19 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 465 39.015 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 Gene3D G3DSA:1.20.120.1910 304 465 1.3E-39 T 12-10-2018 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 8.1E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 8.1E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 8.1E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 8.1E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 311 2.7E-132 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 Gene3D G3DSA:3.40.50.620 1 303 1.3E-136 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 SMART SM00840 353 416 1.7E-20 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CLSA_c01800 c43e1b80bfe6a10c97ab3b06362fdf47 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 464 1.5E-180 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 458 472 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Gene3D G3DSA:3.20.20.80 338 625 2.2E-96 T 12-10-2018 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Gene3D G3DSA:2.70.98.10 742 1030 7.1E-78 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 SUPERFAMILY SSF74650 744 1029 2.51E-84 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 SUPERFAMILY SSF51445 338 627 1.33E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 SUPERFAMILY SSF49303 228 336 2.07E-20 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Pfam PF02929 Beta galactosidase small chain 761 1028 3.1E-70 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 SMART SM01038 758 1029 1.7E-112 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Pfam PF16353 Domain of unknown function(DUF4981) 638 732 1.5E-24 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 55 226 4.4E-36 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 388 413 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 338 630 4.2E-133 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Pfam PF00703 Glycosyl hydrolases family 2 228 336 9.9E-15 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Gene3D G3DSA:2.60.40.10 228 336 7.9E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 SUPERFAMILY SSF49303 623 735 1.97E-23 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Gene3D G3DSA:2.60.40.10 627 738 1.8E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 SUPERFAMILY SSF49785 16 226 3.28E-62 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 2.6E-36 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 533 548 2.6E-36 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 458 473 2.6E-36 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 378 396 2.6E-36 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 347 361 2.6E-36 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 CLSA_c32310 8eb0f59109c0c7a66d96866a2a3e037a 1032 Gene3D G3DSA:2.60.120.260 10 227 5.6E-81 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c37190 8e690add6ba6b48e94be4f5737dfba04 168 Gene3D G3DSA:3.40.630.30 1 167 9.0E-52 T 12-10-2018 CLSA_c37190 8e690add6ba6b48e94be4f5737dfba04 168 SUPERFAMILY SSF55729 1 167 4.36E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c37190 8e690add6ba6b48e94be4f5737dfba04 168 Pfam PF00583 Acetyltransferase (GNAT) family 47 144 2.6E-10 T 12-10-2018 IPR000182 GNAT domain CLSA_c15640 3ccf10f408c359f4496f29e45c87a7cf 151 SUPERFAMILY SSF69360 55 143 5.1E-8 T 12-10-2018 CLSA_c15640 3ccf10f408c359f4496f29e45c87a7cf 151 Gene3D G3DSA:2.10.270.10 67 148 1.6E-7 T 12-10-2018 CLSA_c15640 3ccf10f408c359f4496f29e45c87a7cf 151 Pfam PF01473 Putative cell wall binding repeat 77 95 1.9E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 761 779 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Gene3D G3DSA:3.30.1490.20 11 243 3.9E-108 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 503 4.4E-25 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 SUPERFAMILY SSF52009 379 506 6.28E-36 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 303 356 1.9E-10 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 299 3.1E-48 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 SUPERFAMILY SSF56059 1 379 1.06E-146 T 12-10-2018 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 519 870 2.4E-97 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Gene3D G3DSA:1.10.189.10 345 529 9.9E-78 T 12-10-2018 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Gene3D G3DSA:1.20.80.30 111 198 3.9E-108 T 12-10-2018 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Gene3D G3DSA:3.50.30.10 383 509 9.9E-78 T 12-10-2018 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Gene3D G3DSA:3.30.470.20 244 341 1.9E-39 T 12-10-2018 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 PIRSF PIRSF000853 2 875 0.0 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 SUPERFAMILY SSF51621 512 871 1.97E-135 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 871 0.0 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 Gene3D G3DSA:3.20.20.60 532 874 1.1E-157 T 12-10-2018 CLSA_c11040 aa48a52f16e1b1a833c85ffe9af4b9cf 875 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 450 461 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 SUPERFAMILY SSF52540 585 832 2.72E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Pfam PF04434 SWIM zinc finger 71 101 2.5E-5 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 SMART SM00490 944 1026 4.5E-24 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Pfam PF00271 Helicase conserved C-terminal domain 915 1026 1.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Gene3D G3DSA:3.40.50.10810 628 833 1.2E-64 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Gene3D G3DSA:1.20.120.850 854 1065 1.9E-79 T 12-10-2018 CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Pfam PF00176 SNF2 family N-terminal domain 646 903 6.3E-56 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 SUPERFAMILY SSF52540 834 1084 1.82E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 SMART SM00487 623 807 3.7E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Pfam PF08455 Bacterial SNF2 helicase associated 252 620 5.6E-88 T 12-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial CLSA_c23450 0f3bc54ce40bfece081ef1bf92cc0b4a 1084 Gene3D G3DSA:3.40.50.300 839 1040 1.9E-79 T 12-10-2018 CLSA_c29130 3765492c5958d82377d1b51653ec96b5 189 SUPERFAMILY SSF56349 19 185 1.27E-33 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c29130 3765492c5958d82377d1b51653ec96b5 189 Gene3D G3DSA:1.10.443.10 5 176 1.7E-28 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c29130 3765492c5958d82377d1b51653ec96b5 189 Pfam PF00589 Phage integrase family 17 176 1.2E-21 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 SMART SM00448 7 126 4.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 PIRSF PIRSF000876 4 340 5.6E-118 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 Pfam PF01339 CheB methylesterase 157 335 7.3E-59 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 SUPERFAMILY SSF52738 152 339 1.1E-65 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 340 35.614 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 Pfam PF00072 Response regulator receiver domain 9 107 1.5E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 SUPERFAMILY SSF52172 5 107 1.85E-26 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 Gene3D G3DSA:3.40.50.180 146 340 1.1E-70 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c24150 bd55110a4e7804c2666c3945248a5bf8 340 Gene3D G3DSA:3.40.50.2300 4 130 1.2E-25 T 12-10-2018 CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 SUPERFAMILY SSF52540 2 225 2.15E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 Pfam PF00005 ABC transporter 19 169 5.4E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 Pfam PF00005 ABC transporter 285 414 2.5E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 Gene3D G3DSA:3.40.50.300 1 246 2.8E-56 T 12-10-2018 CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 Gene3D G3DSA:3.40.50.300 257 481 1.5E-50 T 12-10-2018 CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 ProSitePatterns PS00211 ABC transporters family signature. 386 400 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 SMART SM00382 287 462 9.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 SMART SM00382 28 225 5.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c17000 072d48908ae027957945e9bbb8babc42 488 SUPERFAMILY SSF52540 254 469 1.38E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12650 f58bac45b4a8531bdae908e2de92a782 177 SUPERFAMILY SSF55469 1 176 1.27E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c12650 f58bac45b4a8531bdae908e2de92a782 177 Pfam PF00881 Nitroreductase family 71 156 1.7E-12 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c12650 f58bac45b4a8531bdae908e2de92a782 177 Pfam PF00881 Nitroreductase family 8 60 3.5E-17 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c12650 f58bac45b4a8531bdae908e2de92a782 177 Gene3D G3DSA:3.40.109.10 91 177 3.8E-20 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c12650 f58bac45b4a8531bdae908e2de92a782 177 Gene3D G3DSA:3.40.109.10 1 90 3.1E-26 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c29610 178bdf5483a349e67d9e438c2387434c 239 Pfam PF02498 BRO family, N-terminal domain 15 101 1.7E-29 T 12-10-2018 IPR003497 BRO N-terminal domain CLSA_c29610 178bdf5483a349e67d9e438c2387434c 239 SMART SM01040 15 101 8.3E-41 T 12-10-2018 IPR003497 BRO N-terminal domain CLSA_c36530 0baa894a48dda26f533018b29a15e44a 422 SUPERFAMILY SSF53098 113 333 1.52E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c36530 0baa894a48dda26f533018b29a15e44a 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c20970 0baa894a48dda26f533018b29a15e44a 422 SUPERFAMILY SSF53098 113 333 1.52E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c20970 0baa894a48dda26f533018b29a15e44a 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c31820 0baa894a48dda26f533018b29a15e44a 422 SUPERFAMILY SSF53098 113 333 1.52E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c31820 0baa894a48dda26f533018b29a15e44a 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c09050 0baa894a48dda26f533018b29a15e44a 422 SUPERFAMILY SSF53098 113 333 1.52E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c09050 0baa894a48dda26f533018b29a15e44a 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c27450 0baa894a48dda26f533018b29a15e44a 422 SUPERFAMILY SSF53098 113 333 1.52E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c27450 0baa894a48dda26f533018b29a15e44a 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c30480 9a9c44f5c08fe1fb1b75297fed3d6774 200 Gene3D G3DSA:3.40.50.300 11 199 1.9E-32 T 12-10-2018 CLSA_c30480 9a9c44f5c08fe1fb1b75297fed3d6774 200 SUPERFAMILY SSF52540 36 191 4.87E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20110 8342975f2172a8a0eff612c76122bd60 275 Gene3D G3DSA:3.30.70.20 214 274 2.1E-8 T 12-10-2018 CLSA_c20110 8342975f2172a8a0eff612c76122bd60 275 Pfam PF12801 4Fe-4S binding domain 109 130 0.0038 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c20110 8342975f2172a8a0eff612c76122bd60 275 Pfam PF12801 4Fe-4S binding domain 184 215 4.7E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c20110 8342975f2172a8a0eff612c76122bd60 275 Pfam PF13237 4Fe-4S dicluster domain 222 269 1.3E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c20110 8342975f2172a8a0eff612c76122bd60 275 SUPERFAMILY SSF54862 112 274 5.03E-18 T 12-10-2018 CLSA_c20110 8342975f2172a8a0eff612c76122bd60 275 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 SUPERFAMILY SSF52540 43 353 2.6E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.2E-23 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 SMART SM00382 100 277 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Gene3D G3DSA:3.40.50.300 91 285 1.0E-130 T 12-10-2018 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 430 2.8E-186 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 SMART SM00963 2 87 3.0E-34 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Gene3D G3DSA:1.20.120.140 6 306 1.0E-130 T 12-10-2018 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.6E-78 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Pfam PF02978 Signal peptide binding domain 327 429 4.9E-29 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Gene3D G3DSA:1.10.260.30 327 447 4.8E-35 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 SUPERFAMILY SSF47446 327 430 3.92E-31 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 449 33.927 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CLSA_c13960 0aba9dedbe55938d7d1a4f8442ac45d2 450 SMART SM00962 101 296 5.9E-118 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 Pfam PF00488 MutS domain V 329 510 3.6E-34 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 SUPERFAMILY SSF160443 708 785 1.09E-9 T 12-10-2018 IPR036063 Smr domain superfamily CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 784 21.633 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 407 423 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 PIRSF PIRSF005814 1 785 1.6E-260 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 785 3.2E-213 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 SUPERFAMILY SSF48334 23 286 1.57E-19 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 Pfam PF01713 Smr domain 710 785 1.3E-20 T 12-10-2018 IPR002625 Smr domain CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 Gene3D G3DSA:3.30.1370.110 699 786 5.2E-25 T 12-10-2018 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 SMART SM00533 9 312 1.8E-27 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 SUPERFAMILY SSF52540 289 511 3.75E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 SMART SM00534 325 510 1.5E-63 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 Gene3D G3DSA:3.40.50.300 289 596 5.7E-81 T 12-10-2018 CLSA_c12220 22b1ef3e00d4b33f98d4403289bf9525 786 SMART SM00463 707 785 3.2E-16 T 12-10-2018 IPR002625 Smr domain CLSA_c11590 22add29729a99a635bd695d86c9f2f31 215 Pfam PF09335 SNARE associated Golgi protein 50 172 3.1E-22 T 12-10-2018 IPR032816 SNARE associated Golgi protein CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 SUPERFAMILY SSF53920 187 459 6.54E-65 T 12-10-2018 IPR009016 Iron hydrogenase CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 Gene3D G3DSA:3.40.950.20 260 481 1.7E-37 T 12-10-2018 CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 221 453 1.5E-60 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 Pfam PF00037 4Fe-4S binding domain 135 156 4.8E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 Pfam PF00037 4Fe-4S binding domain 182 204 2.6E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 TIGRFAM TIGR04105 FeFe_hydrog_B1: [FeFe] hydrogenase, group B1/B3 4 458 5.8E-181 T 12-10-2018 IPR027631 [FeFe] hydrogenase, group B1/B3 CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 Gene3D G3DSA:3.30.70.20 160 224 1.2E-12 T 12-10-2018 CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 SUPERFAMILY SSF54862 122 206 3.77E-19 T 12-10-2018 CLSA_c03640 99ae991072bf886593b2e09c2da0a7c2 495 Gene3D G3DSA:3.30.70.20 103 159 6.2E-12 T 12-10-2018 CLSA_c36210 ed8b580f89ccd4ba823b8ad99a99be0f 108 Pfam PF01638 HxlR-like helix-turn-helix 19 107 2.2E-27 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type CLSA_c36210 ed8b580f89ccd4ba823b8ad99a99be0f 108 SUPERFAMILY SSF46785 9 106 2.36E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c36210 ed8b580f89ccd4ba823b8ad99a99be0f 108 Gene3D G3DSA:1.10.10.10 6 108 2.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 Pfam PF00155 Aminotransferase class I and II 35 384 1.0E-49 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 123 144 7.9E-11 T 12-10-2018 CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 169 193 7.9E-11 T 12-10-2018 CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 238 262 7.9E-11 T 12-10-2018 CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 SUPERFAMILY SSF53383 14 391 1.21E-79 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 Gene3D G3DSA:3.40.640.10 70 302 9.5E-133 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c17830 ce7989bcb584b3a1a34e7d3d9a0a8fe5 396 Gene3D G3DSA:3.90.1150.10 17 379 9.5E-133 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.8E-6 T 12-10-2018 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 1.8E-6 T 12-10-2018 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.0E-5 T 12-10-2018 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 3.0E-5 T 12-10-2018 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 4 402 8.8E-139 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 Gene3D G3DSA:3.50.50.60 5 399 3.6E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 Gene3D G3DSA:2.40.30.10 190 350 3.6E-129 T 12-10-2018 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 SUPERFAMILY SSF51905 3 405 6.72E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 Gene3D G3DSA:1.10.8.260 269 333 3.6E-129 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 SUPERFAMILY SSF160996 191 351 3.66E-44 T 12-10-2018 CLSA_c22310 b406b5a897547d164f7b5152b72d30d5 405 Pfam PF03486 HI0933-like protein 3 403 1.1E-136 T 12-10-2018 CLSA_c17690 c53c027ee9001f06a4f58486da358715 221 SUPERFAMILY SSF88946 13 86 7.85E-14 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c17690 c53c027ee9001f06a4f58486da358715 221 Gene3D G3DSA:1.10.10.10 42 202 1.1E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17690 c53c027ee9001f06a4f58486da358715 221 Pfam PF04542 Sigma-70 region 2 20 90 2.7E-6 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c17690 c53c027ee9001f06a4f58486da358715 221 PIRSF PIRSF038953 5 221 5.2E-43 T 12-10-2018 IPR014244 RNA polymerase sigma-I type CLSA_c17690 c53c027ee9001f06a4f58486da358715 221 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 1 221 24.383 T 12-10-2018 IPR014244 RNA polymerase sigma-I type CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 Gene3D G3DSA:1.10.220.30 199 338 6.9E-45 T 12-10-2018 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 SUPERFAMILY SSF48029 8 107 2.88E-21 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 Gene3D G3DSA:1.10.220.30 1 87 1.8E-23 T 12-10-2018 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 Pfam PF14841 FliG middle domain 120 192 6.6E-29 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 4 338 9.6E-121 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 Gene3D G3DSA:1.10.220.30 107 198 6.2E-31 T 12-10-2018 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 Pfam PF14842 FliG N-terminal domain 7 111 4.3E-35 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 Pfam PF01706 FliG C-terminal domain 221 328 1.4E-38 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 SUPERFAMILY SSF48029 118 329 5.23E-64 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 8 24 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 37 63 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 2.8E-69 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c39350 80da271cb41679072ca4adda2ca9bd74 338 PIRSF PIRSF003161 2 338 1.1E-115 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 SUPERFAMILY SSF52096 34 285 4.62E-80 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 Gene3D G3DSA:3.90.226.10 34 287 1.4E-90 T 12-10-2018 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 287 39.663 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 285 5.7E-116 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 235 246 2.7E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 257 266 2.7E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 169 187 2.7E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 206 223 2.7E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 135 149 2.7E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13170 84ec48a4cf696a6ec4b529bbdfc01655 291 Pfam PF01039 Carboxyl transferase domain 68 248 1.3E-21 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CLSA_c17160 51986217776905d0edcf4db37eac7f08 119 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 99 3.4E-22 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLSA_c17160 51986217776905d0edcf4db37eac7f08 119 Gene3D G3DSA:3.30.420.130 1 108 1.2E-27 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CLSA_c17160 51986217776905d0edcf4db37eac7f08 119 SUPERFAMILY SSF53146 1 118 3.92E-32 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 Pfam PF12802 MarR family 29 90 2.0E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 SMART SM00347 24 127 2.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 SUPERFAMILY SSF46785 11 138 2.33E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c44340 3d388ce19617c67741507fe96f176ee1 143 Gene3D G3DSA:1.10.10.10 3 139 1.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c33730 a3c314cf6024d640329390f4ed338478 139 SMART SM01078 5 119 3.8E-48 T 12-10-2018 IPR014925 Uncharacterised domain CGGC-dom CLSA_c33730 a3c314cf6024d640329390f4ed338478 139 Pfam PF08821 CGGC domain 6 118 4.4E-26 T 12-10-2018 IPR014925 Uncharacterised domain CGGC-dom CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 PIRSF PIRSF000164 1 298 4.2E-80 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 298 40.325 T 12-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 Pfam PF01180 Dihydroorotate dehydrogenase 1 283 4.5E-74 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 SUPERFAMILY SSF51395 2 297 5.5E-83 T 12-10-2018 CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 Gene3D G3DSA:3.20.20.70 1 297 1.3E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 236 256 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CLSA_c12500 6f7e890a6378115e146eb56fe94e956e 298 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 297 1.4E-110 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLSA_c20590 b16e453c1e9b58d3ceacc69235c97c6b 408 Pfam PF00872 Transposase, Mutator family 11 381 3.3E-113 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c20590 b16e453c1e9b58d3ceacc69235c97c6b 408 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c32720 b16e453c1e9b58d3ceacc69235c97c6b 408 Pfam PF00872 Transposase, Mutator family 11 381 3.3E-113 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c32720 b16e453c1e9b58d3ceacc69235c97c6b 408 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c42760 b16e453c1e9b58d3ceacc69235c97c6b 408 Pfam PF00872 Transposase, Mutator family 11 381 3.3E-113 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c42760 b16e453c1e9b58d3ceacc69235c97c6b 408 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 Gene3D G3DSA:3.40.50.300 18 306 7.1E-52 T 12-10-2018 CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 Pfam PF13361 UvrD-like helicase C-terminal domain 317 755 1.5E-15 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 Gene3D G3DSA:3.40.50.300 514 769 4.9E-12 T 12-10-2018 CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 Gene3D G3DSA:1.10.10.160 131 226 7.1E-52 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 SUPERFAMILY SSF52540 8 760 3.87E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 306 3.6E-51 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CLSA_c21660 72a84a43dd697744d1a12e47d92f7d1b 858 Gene3D G3DSA:3.40.50.300 321 449 1.0E-9 T 12-10-2018 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 SUPERFAMILY SSF47789 247 312 4.45E-23 T 12-10-2018 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 SMART SM00662 20 227 1.7E-96 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Gene3D G3DSA:2.170.120.12 50 170 1.1E-88 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 151 7.7E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 36.556 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Gene3D G3DSA:3.30.1360.10 15 220 1.1E-88 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 SUPERFAMILY SSF55257 5 226 7.26E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 SUPERFAMILY SSF56553 50 171 3.66E-43 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 2.8E-24 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 311 4.9E-119 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 313 2.0E-22 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Gene3D G3DSA:1.10.150.20 237 314 8.5E-31 T 12-10-2018 CLSA_c02310 3384dccf95726b843a64c8ec5e03735d 315 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 2.3E-27 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c09880 1b323bb2f9d61b2863a38e034582c11b 301 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 63 177 7.6E-14 T 12-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain CLSA_c09880 1b323bb2f9d61b2863a38e034582c11b 301 SUPERFAMILY SSF51695 27 301 1.52E-58 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CLSA_c09880 1b323bb2f9d61b2863a38e034582c11b 301 Gene3D G3DSA:3.20.20.190 22 301 6.9E-90 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CLSA_c09880 1b323bb2f9d61b2863a38e034582c11b 301 SMART SM00148 35 177 8.6E-11 T 12-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain CLSA_c34910 1cd17d7aeca09bdd6b272b4748712769 466 Pfam PF00324 Amino acid permease 19 454 6.1E-112 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CLSA_c34910 1cd17d7aeca09bdd6b272b4748712769 466 Gene3D G3DSA:1.20.1740.10 11 464 8.0E-61 T 12-10-2018 CLSA_c34910 1cd17d7aeca09bdd6b272b4748712769 466 PIRSF PIRSF006060 1 465 1.3E-65 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c34910 1cd17d7aeca09bdd6b272b4748712769 466 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 Pfam PF08502 LeuA allosteric (dimerisation) domain 418 553 7.5E-26 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 553 1.1E-228 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 SUPERFAMILY SSF89000 385 434 6.67E-11 T 12-10-2018 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 36 52 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 Gene3D G3DSA:3.30.160.270 374 553 5.2E-53 T 12-10-2018 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 Gene3D G3DSA:3.20.20.70 7 373 5.6E-151 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 Pfam PF00682 HMGL-like 29 305 1.2E-72 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 238 251 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 1 555 51.41 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 SUPERFAMILY SSF51569 18 325 7.57E-98 T 12-10-2018 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 SUPERFAMILY SSF110921 452 553 5.23E-29 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c17360 e6ca10e28b85cda08da7bf1e3682403a 556 SMART SM00917 418 554 3.3E-27 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 51.3 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 Gene3D G3DSA:3.40.1450.10 77 309 1.3E-231 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 509 3.0E-220 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 SUPERFAMILY SSF64158 77 300 1.44E-90 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 296 7.1E-92 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 SUPERFAMILY SSF53649 3 508 3.14E-75 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 PIRSF PIRSF001492 1 512 1.2E-213 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 Gene3D G3DSA:3.40.720.10 5 507 1.3E-231 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CLSA_c40400 648574c2ee6863c622b0b552a3e50c6c 512 Pfam PF01676 Metalloenzyme superfamily 4 498 7.1E-82 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CLSA_c23810 3fdce37e8d924c9418475d65d120d08a 218 SUPERFAMILY SSF55124 13 71 4.09E-12 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23810 3fdce37e8d924c9418475d65d120d08a 218 Gene3D G3DSA:3.30.413.10 73 217 2.2E-31 T 12-10-2018 CLSA_c23810 3fdce37e8d924c9418475d65d120d08a 218 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 104 215 9.6E-21 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23810 3fdce37e8d924c9418475d65d120d08a 218 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 9 71 3.3E-15 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c23810 3fdce37e8d924c9418475d65d120d08a 218 SUPERFAMILY SSF56014 82 216 5.89E-34 T 12-10-2018 CLSA_c23810 3fdce37e8d924c9418475d65d120d08a 218 PIRSF PIRSF037487 5 215 1.3E-68 T 12-10-2018 IPR017220 Sulphite reductase, assimilatory CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Pfam PF13181 Tetratricopeptide repeat 250 280 0.0057 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Pfam PF13181 Tetratricopeptide repeat 148 179 9.1E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Pfam PF00515 Tetratricopeptide repeat 114 144 5.2E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Pfam PF00515 Tetratricopeptide repeat 78 111 9.6E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Pfam PF13431 Tetratricopeptide repeat 202 234 8.1E-8 T 12-10-2018 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 146 179 7.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 214 247 0.14 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 180 213 0.0012 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 44 77 0.24 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 248 281 0.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 112 145 8.2E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SMART SM00028 78 111 2.4E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Gene3D G3DSA:1.25.40.10 1 126 2.6E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 Gene3D G3DSA:1.25.40.10 127 300 4.0E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c13040 4613ec89211ed931d6b8ea6b59a1f2dc 305 SUPERFAMILY SSF48452 12 283 4.55E-40 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 5.6E-81 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 45.736 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 Gene3D G3DSA:1.10.3730.40 183 334 4.3E-72 T 12-10-2018 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 SUPERFAMILY SSF51735 3 183 7.03E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 Gene3D G3DSA:3.40.50.720 1 182 2.1E-81 T 12-10-2018 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 SUPERFAMILY SSF48179 184 332 4.93E-72 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 PIRSF PIRSF000116 1 207 3.2E-42 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 PIRSF PIRSF000116 202 334 6.8E-16 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 5.8E-68 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLSA_c02740 95dfaade01528c6df6d0307d77a6dcf5 334 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 7.3E-147 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLSA_c11020 0f5a636c5217226a7b2b8900f8336c19 207 Pfam PF14242 Domain of unknown function (DUF4342) 58 134 6.3E-25 T 12-10-2018 IPR025642 Domain of unknown function DUF4342 CLSA_c11020 0f5a636c5217226a7b2b8900f8336c19 207 SUPERFAMILY SSF46934 3 52 3.15E-9 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 CLSA_c11020 0f5a636c5217226a7b2b8900f8336c19 207 Gene3D G3DSA:1.10.8.10 3 41 6.0E-6 T 12-10-2018 CLSA_c11580 4c039ad181713ce5578fd7ea524438d7 258 Pfam PF00990 Diguanylate cyclase, GGDEF domain 102 252 4.3E-35 T 12-10-2018 IPR000160 GGDEF domain CLSA_c11580 4c039ad181713ce5578fd7ea524438d7 258 SMART SM00267 91 255 3.0E-38 T 12-10-2018 IPR000160 GGDEF domain CLSA_c11580 4c039ad181713ce5578fd7ea524438d7 258 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 98 254 2.0E-33 T 12-10-2018 IPR000160 GGDEF domain CLSA_c11580 4c039ad181713ce5578fd7ea524438d7 258 SUPERFAMILY SSF55073 107 255 2.12E-33 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c11580 4c039ad181713ce5578fd7ea524438d7 258 Gene3D G3DSA:3.30.70.270 96 256 4.4E-40 T 12-10-2018 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 Gene3D G3DSA:3.40.50.720 2 212 8.2E-71 T 12-10-2018 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 PIRSF PIRSF000124 17 435 2.7E-67 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 SMART SM00984 333 427 7.1E-30 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 18 195 1.1E-43 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 333 426 1.3E-22 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 SUPERFAMILY SSF51735 18 208 1.31E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 SUPERFAMILY SSF52413 318 425 6.41E-26 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 216 306 4.6E-30 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 PIRSF PIRSF500136 7 438 2.8E-170 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 SUPERFAMILY SSF48179 215 308 3.91E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 18 423 5.9E-137 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLSA_c43270 01910a7e5579c94ff5a8c8f2fa881a5b 438 Gene3D G3DSA:3.40.50.720 215 437 1.5E-65 T 12-10-2018 CLSA_c08830 fb9b12125c1c4c2559b70df8f5f7f951 226 SUPERFAMILY SSF48295 97 185 1.2E-20 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c08830 fb9b12125c1c4c2559b70df8f5f7f951 226 Pfam PF13518 Helix-turn-helix domain 132 184 3.5E-9 T 12-10-2018 CLSA_c08830 fb9b12125c1c4c2559b70df8f5f7f951 226 Pfam PF13518 Helix-turn-helix domain 11 56 4.6E-8 T 12-10-2018 CLSA_c08830 fb9b12125c1c4c2559b70df8f5f7f951 226 SUPERFAMILY SSF48295 2 62 1.99E-12 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c39690 4396c0ba1997db6111c018778198d99b 72 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 68 8.0E-23 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CLSA_c39690 4396c0ba1997db6111c018778198d99b 72 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-11 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CLSA_c39690 4396c0ba1997db6111c018778198d99b 72 Pfam PF02599 Global regulator protein family 1 52 5.9E-24 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CLSA_c39690 4396c0ba1997db6111c018778198d99b 72 Gene3D G3DSA:3.30.70.1680 1 63 5.4E-25 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CLSA_c39690 4396c0ba1997db6111c018778198d99b 72 SUPERFAMILY SSF117130 1 55 2.09E-18 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CLSA_c39690 4396c0ba1997db6111c018778198d99b 72 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 69 17.401 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CLSA_c02530 0896feea7ca624fcc1ad5429bacf97d5 283 Gene3D G3DSA:3.40.1700.10 107 259 1.4E-58 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CLSA_c02530 0896feea7ca624fcc1ad5429bacf97d5 283 SUPERFAMILY SSF143597 45 245 1.44E-66 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CLSA_c02530 0896feea7ca624fcc1ad5429bacf97d5 283 PIRSF PIRSF004793 10 275 1.0E-91 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 CLSA_c02530 0896feea7ca624fcc1ad5429bacf97d5 283 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 18 252 1.1E-73 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 CLSA_c02530 0896feea7ca624fcc1ad5429bacf97d5 283 Hamap MF_01499 Diadenylate cyclase [dacA]. 10 259 32.797 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 CLSA_c02530 0896feea7ca624fcc1ad5429bacf97d5 283 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 123 241 1.3E-43 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Pfam PF00226 DnaJ domain 5 67 7.9E-30 T 12-10-2018 IPR001623 DnaJ domain CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 SUPERFAMILY SSF46565 1 107 4.97E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 357 3.6E-145 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Gene3D G3DSA:2.10.230.10 150 214 6.1E-38 T 12-10-2018 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 PRINTS PR00625 DnaJ domain signature 25 40 3.1E-31 T 12-10-2018 IPR001623 DnaJ domain CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 PRINTS PR00625 DnaJ domain signature 62 81 3.1E-31 T 12-10-2018 IPR001623 DnaJ domain CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 PRINTS PR00625 DnaJ domain signature 7 25 3.1E-31 T 12-10-2018 IPR001623 DnaJ domain CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 PRINTS PR00625 DnaJ domain signature 42 62 3.1E-31 T 12-10-2018 IPR001623 DnaJ domain CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 SUPERFAMILY SSF49493 121 262 7.72E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Pfam PF01556 DnaJ C terminal domain 123 340 6.7E-43 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 SUPERFAMILY SSF49493 265 351 1.57E-22 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Gene3D G3DSA:2.60.260.20 261 371 1.5E-27 T 12-10-2018 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Gene3D G3DSA:2.60.260.20 120 256 6.1E-38 T 12-10-2018 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Pfam PF00684 DnaJ central domain 150 214 1.3E-14 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 377 40.324 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 Gene3D G3DSA:1.10.287.110 1 115 1.3E-39 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 SUPERFAMILY SSF57938 137 218 5.89E-19 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CLSA_c10860 cb5d8d48d91bfd25bda06d1558d8f0b5 377 SMART SM00271 4 62 2.4E-35 T 12-10-2018 IPR001623 DnaJ domain CLSA_c39140 037d51c5ea6fe1a327945cbb123d1383 258 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 158 2.4E-38 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLSA_c39140 037d51c5ea6fe1a327945cbb123d1383 258 SUPERFAMILY SSF117143 93 168 6.8E-19 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLSA_c39140 037d51c5ea6fe1a327945cbb123d1383 258 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLSA_c39140 037d51c5ea6fe1a327945cbb123d1383 258 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 186 252 4.2E-15 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Pfam PF12848 ABC transporter 238 321 1.6E-16 T 12-10-2018 IPR032781 ABC-transporter extension domain CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Gene3D G3DSA:3.40.50.300 296 557 1.8E-60 T 12-10-2018 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Pfam PF16326 ABC transporter C-terminal domain 576 639 1.6E-10 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Pfam PF00005 ABC transporter 350 479 7.0E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 SMART SM00382 28 243 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 SMART SM00382 358 524 2.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Gene3D G3DSA:3.40.50.300 1 290 4.9E-63 T 12-10-2018 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 SUPERFAMILY SSF52540 4 243 3.03E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Gene3D G3DSA:1.10.287.380 558 640 1.8E-6 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 Pfam PF00005 ABC transporter 19 196 3.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c40110 ea4c324298964c4eb957242562f9cc0b 640 SUPERFAMILY SSF52540 319 538 2.7E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c04460 b14e25b05e76a55d7427d02aaf3bc282 186 Gene3D G3DSA:3.90.220.20 4 186 1.1E-32 T 12-10-2018 CLSA_c04460 b14e25b05e76a55d7427d02aaf3bc282 186 Pfam PF01420 Type I restriction modification DNA specificity domain 9 182 8.3E-16 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLSA_c04460 b14e25b05e76a55d7427d02aaf3bc282 186 SUPERFAMILY SSF116734 9 184 6.87E-35 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 12.902 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Gene3D G3DSA:3.30.470.20 661 932 2.5E-97 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Gene3D G3DSA:3.40.50.20 1 116 2.3E-49 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Gene3D G3DSA:3.40.50.20 550 659 5.3E-47 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 543 7.8E-37 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Gene3D G3DSA:1.10.1030.10 402 549 7.7E-43 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SMART SM00851 953 1040 1.5E-28 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SUPERFAMILY SSF52440 1 127 3.45E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SUPERFAMILY SSF52440 553 671 2.73E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.4E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SUPERFAMILY SSF56059 669 930 7.95E-92 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Pfam PF02142 MGS-like domain 954 1040 6.4E-19 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.2E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 869 2.3E-33 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 4 1049 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Gene3D G3DSA:3.30.470.20 119 401 4.3E-124 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.295 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SMART SM01096 420 543 5.6E-63 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SUPERFAMILY SSF48108 395 548 5.89E-45 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SUPERFAMILY SSF56059 128 399 1.47E-106 T 12-10-2018 CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 Gene3D G3DSA:3.40.50.1380 936 1068 1.9E-35 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 SUPERFAMILY SSF52335 939 1055 3.4E-30 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CLSA_c00440 8439345f16dc950a3a2f89fe882c63b0 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c15940 e3f7baaa216ee5e4619a41cd61e818ba 389 Gene3D G3DSA:1.10.510.10 143 387 1.1E-39 T 12-10-2018 CLSA_c15940 e3f7baaa216ee5e4619a41cd61e818ba 389 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 160 183 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 CLSA_c15940 e3f7baaa216ee5e4619a41cd61e818ba 389 SUPERFAMILY SSF56112 157 379 5.66E-40 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c15940 e3f7baaa216ee5e4619a41cd61e818ba 389 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 269 281 - T 12-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 CLSA_c15940 e3f7baaa216ee5e4619a41cd61e818ba 389 Pfam PF00069 Protein kinase domain 158 359 2.2E-31 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 SUPERFAMILY SSF46785 2 76 4.69E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 SMART SM00895 98 223 1.2E-15 T 12-10-2018 IPR011711 GntR, C-terminal CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 Pfam PF07729 FCD domain 98 222 8.7E-21 T 12-10-2018 IPR011711 GntR, C-terminal CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 SMART SM00345 14 73 7.4E-23 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 Gene3D G3DSA:1.20.120.530 79 228 3.1E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 Gene3D G3DSA:1.10.10.10 1 73 1.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 9.1E-23 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 SUPERFAMILY SSF48008 96 226 6.28E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.2E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c03470 a75f62d07e308a435aa91f36ced5981b 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.2E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c14610 9546ede7d4dba5c56af92fe79c712065 401 SUPERFAMILY SSF48452 242 345 1.52E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c14610 9546ede7d4dba5c56af92fe79c712065 401 Pfam PF04184 ST7 protein 157 313 5.0E-9 T 12-10-2018 IPR007311 ST7 CLSA_c14610 9546ede7d4dba5c56af92fe79c712065 401 Gene3D G3DSA:1.25.40.10 144 382 1.0E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c27600 5d2ea5155ffa119a5974518209fc787c 294 SUPERFAMILY SSF50974 3 291 7.06E-36 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CLSA_c27600 5d2ea5155ffa119a5974518209fc787c 294 Gene3D G3DSA:2.130.10.10 83 255 1.3E-31 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c27600 5d2ea5155ffa119a5974518209fc787c 294 Gene3D G3DSA:2.130.10.10 1 82 2.2E-5 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 6.8E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 6.8E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 6.8E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 6.8E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 6.8E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 SUPERFAMILY SSF51445 2 473 2.49E-166 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 Gene3D G3DSA:3.20.20.80 1 476 1.3E-169 T 12-10-2018 CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLSA_c09820 97c0c7346ea5fa85bcb014d69619bdad 477 Pfam PF00232 Glycosyl hydrolase family 1 3 473 1.7E-131 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c25310 7b25f4d4468f179703dc8e2f3a042144 205 SUPERFAMILY SSF53254 1 204 4.58E-57 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c25310 7b25f4d4468f179703dc8e2f3a042144 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 201 1.2E-57 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c25310 7b25f4d4468f179703dc8e2f3a042144 205 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CLSA_c25310 7b25f4d4468f179703dc8e2f3a042144 205 Gene3D G3DSA:3.40.50.1240 3 205 6.8E-63 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c25310 7b25f4d4468f179703dc8e2f3a042144 205 PIRSF PIRSF000709 1 194 1.7E-27 T 12-10-2018 CLSA_c25310 7b25f4d4468f179703dc8e2f3a042144 205 SMART SM00855 5 160 3.7E-18 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 Gene3D G3DSA:1.10.4030.30 37 334 1.6E-68 T 12-10-2018 CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 SUPERFAMILY SSF54534 190 297 4.91E-24 T 12-10-2018 CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 SUPERFAMILY SSF109998 36 205 1.83E-32 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 Pfam PF13624 SurA N-terminal domain 4 161 5.0E-24 T 12-10-2018 CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 233 253 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 Pfam PF13616 PPIC-type PPIASE domain 190 294 8.6E-24 T 12-10-2018 CLSA_c01120 bc91c18a4d7d9439c9c9ae8ec70fdbe6 344 Gene3D G3DSA:3.10.50.40 192 301 1.6E-68 T 12-10-2018 CLSA_c45390 c7473bf01fb4770944fbaf3e7c3993ca 385 PIRSF PIRSF005572 1 384 1.3E-52 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CLSA_c45390 c7473bf01fb4770944fbaf3e7c3993ca 385 SUPERFAMILY SSF53383 3 380 1.64E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c45390 c7473bf01fb4770944fbaf3e7c3993ca 385 Gene3D G3DSA:3.40.640.10 22 275 1.1E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c45390 c7473bf01fb4770944fbaf3e7c3993ca 385 Gene3D G3DSA:3.90.1150.10 3 372 1.1E-110 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c45390 c7473bf01fb4770944fbaf3e7c3993ca 385 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 379 1.0E-140 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function CLSA_c45390 c7473bf01fb4770944fbaf3e7c3993ca 385 Pfam PF00266 Aminotransferase class-V 3 371 2.6E-83 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 SUPERFAMILY SSF53697 6 448 1.75E-139 T 12-10-2018 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 Gene3D G3DSA:3.40.50.10490 227 418 4.1E-79 T 12-10-2018 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 3.1E-25 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 3.1E-25 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 3.1E-25 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 3.1E-25 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 3.1E-25 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 3.1E-25 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 409 426 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 Pfam PF00342 Phosphoglucose isomerase 77 426 1.1E-20 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 Gene3D G3DSA:3.40.50.10490 40 226 1.4E-74 T 12-10-2018 CLSA_c03710 675d473ab88a8b89b2090a2675857c2e 449 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 436 25.381 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 Gene3D G3DSA:1.10.10.10 102 156 1.4E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 Gene3D G3DSA:1.10.10.10 176 252 3.0E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 PIRSF PIRSF000770 3 252 8.5E-33 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 249 8.7E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 SUPERFAMILY SSF88946 14 102 2.49E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 SUPERFAMILY SSF88659 106 177 3.01E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 Pfam PF04545 Sigma-70, region 4 198 247 1.8E-14 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 19 249 2.6E-113 T 12-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 PRINTS PR00046 Major sigma-70 factor signature 82 90 2.2E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 PRINTS PR00046 Major sigma-70 factor signature 58 71 2.2E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 PRINTS PR00046 Major sigma-70 factor signature 202 214 2.2E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 PRINTS PR00046 Major sigma-70 factor signature 219 234 2.2E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 PRINTS PR00046 Major sigma-70 factor signature 234 245 2.2E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 Pfam PF04542 Sigma-70 region 2 34 100 6.5E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 SUPERFAMILY SSF88659 168 251 2.99E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 249 9.9E-86 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 58 71 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c10680 e777a4e9b3cf8ccfed7dcfb27882791a 252 Gene3D G3DSA:1.20.120.1810 1 101 1.4E-24 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 SMART SM00842 25 206 7.6E-24 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 Gene3D G3DSA:3.30.420.40 213 365 3.5E-49 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 Pfam PF14450 Cell division protein FtsA 223 376 6.9E-12 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 SUPERFAMILY SSF53067 222 375 9.5E-19 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 Gene3D G3DSA:3.30.420.40 28 367 3.5E-49 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 Gene3D G3DSA:3.90.640.10 251 313 3.5E-49 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 SUPERFAMILY SSF53067 24 206 3.11E-20 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 Gene3D G3DSA:3.30.1490.110 100 185 3.5E-49 T 12-10-2018 CLSA_c13390 82838d9fe57bf7f02a208cddbf4a6d24 435 Pfam PF02491 SHS2 domain inserted in FTSA 103 177 2.3E-9 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CLSA_c31190 de1c73fb813431c3160966431e12d02e 198 Pfam PF01926 50S ribosome-binding GTPase 25 143 3.7E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c31190 de1c73fb813431c3160966431e12d02e 198 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 3.1E-75 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CLSA_c31190 de1c73fb813431c3160966431e12d02e 198 Gene3D G3DSA:3.40.50.300 1 195 4.1E-57 T 12-10-2018 CLSA_c31190 de1c73fb813431c3160966431e12d02e 198 SUPERFAMILY SSF52540 1 189 7.28E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c31190 de1c73fb813431c3160966431e12d02e 198 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 29.086 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CLSA_c09720 0c23dc19096a5dd7e57e41a7600a6200 64 Pfam PF01721 Class II bacteriocin 23 57 4.2E-20 T 12-10-2018 IPR002633 Bacteriocin, class IIa GO:0005576|GO:0042742 CLSA_c09720 0c23dc19096a5dd7e57e41a7600a6200 64 ProDom PD004452 BACTERIOCIN PLASMID PRECURSOR ANTIMICROBIAL ANTIBIOTIC SEQUENCING DIRECT SIGNAL A ENTEROCIN 23 56 3.0E-4 T 12-10-2018 IPR002633 Bacteriocin, class IIa GO:0005576|GO:0042742 CLSA_c09720 0c23dc19096a5dd7e57e41a7600a6200 64 Gene3D G3DSA:1.20.5.130 1 62 4.1E-13 T 12-10-2018 IPR023388 Bacteriocin class IIa domain superfamily CLSA_c01610 23383bd3ac633c53e341e33f9874529b 213 Gene3D G3DSA:3.40.50.300 1 210 4.9E-64 T 12-10-2018 CLSA_c01610 23383bd3ac633c53e341e33f9874529b 213 Pfam PF02223 Thymidylate kinase 9 200 1.1E-51 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CLSA_c01610 23383bd3ac633c53e341e33f9874529b 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 200 1.0E-59 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLSA_c01610 23383bd3ac633c53e341e33f9874529b 213 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLSA_c01610 23383bd3ac633c53e341e33f9874529b 213 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 29.545 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLSA_c01610 23383bd3ac633c53e341e33f9874529b 213 SUPERFAMILY SSF52540 1 209 6.17E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 5.1E-59 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 Gene3D G3DSA:3.20.20.70 1 214 3.5E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 8.5E-98 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 SUPERFAMILY SSF51569 1 213 4.81E-80 T 12-10-2018 CLSA_c07590 d86e63a78490216b837685c0db4240bf 215 Hamap MF_00494 Probable transaldolase [tal]. 1 214 47.192 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLSA_c44300 307bfbebbe43365e3da9b3c28e942fef 451 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 446 1.7E-178 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 CLSA_c44300 307bfbebbe43365e3da9b3c28e942fef 451 Pfam PF02378 Phosphotransferase system, EIIC 108 388 4.1E-47 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c44300 307bfbebbe43365e3da9b3c28e942fef 451 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c44300 307bfbebbe43365e3da9b3c28e942fef 451 SUPERFAMILY SSF55604 7 79 6.02E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c44300 307bfbebbe43365e3da9b3c28e942fef 451 Gene3D G3DSA:3.30.1360.60 1 78 4.4E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c44300 307bfbebbe43365e3da9b3c28e942fef 451 Pfam PF00367 phosphotransferase system, EIIB 8 41 5.7E-18 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 Gene3D G3DSA:3.30.565.10 494 651 2.6E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 534 641 1.3E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 SUPERFAMILY SSF47384 409 487 1.79E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 SMART SM00388 419 487 6.5E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 Gene3D G3DSA:1.10.287.130 399 489 8.3E-17 T 12-10-2018 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 SUPERFAMILY SSF55874 492 639 5.24E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 599 2.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 585 2.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 624 2.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 Pfam PF00512 His Kinase A (phospho-acceptor) domain 420 484 9.0E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c11940 8fe74f16335a834ae52f13418c82151a 676 SMART SM00387 533 645 4.2E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c12680 78d77bcc6dc06186538d2718102aaaa1 300 SUPERFAMILY SSF64518 25 184 2.35E-10 T 12-10-2018 CLSA_c12680 78d77bcc6dc06186538d2718102aaaa1 300 Gene3D G3DSA:1.20.1330.10 76 240 9.4E-9 T 12-10-2018 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 4 304 6.5E-54 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 SUPERFAMILY SSF55904 345 478 3.53E-24 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 Gene3D G3DSA:3.90.1150.150 274 373 8.3E-86 T 12-10-2018 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 Gene3D G3DSA:3.40.640.10 47 273 8.3E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 394 459 3.7E-10 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 Gene3D G3DSA:3.90.105.10 417 474 5.1E-19 T 12-10-2018 CLSA_c38780 3c4282070bb4f625ba18cac036e44a53 480 SUPERFAMILY SSF53383 4 382 4.61E-63 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c41750 55637045c2718dc97072ddc636cd1b83 488 SUPERFAMILY SSF51004 9 285 4.71E-27 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLSA_c41750 55637045c2718dc97072ddc636cd1b83 488 Gene3D G3DSA:2.130.10.10 1 179 8.8E-17 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c41750 55637045c2718dc97072ddc636cd1b83 488 Gene3D G3DSA:2.130.10.10 180 299 5.0E-10 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 85 6.0E-6 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 Gene3D G3DSA:1.20.5.440 91 133 1.6E-9 T 12-10-2018 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 17.55 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 130 1.3E-25 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 SUPERFAMILY SSF51344 4 86 2.09E-16 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 SUPERFAMILY SSF46604 88 131 3.14E-5 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 6.1E-9 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 84 3.3E-19 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05160 510cbc0822acaeaee3648b716837ac34 134 Gene3D G3DSA:2.60.15.10 2 90 1.4E-18 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 146 1.1E-27 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 SUPERFAMILY SSF56322 10 454 4.32E-136 T 12-10-2018 IPR005801 ADC synthase GO:0009058 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 Gene3D G3DSA:3.60.120.10 5 454 1.8E-154 T 12-10-2018 IPR005801 ADC synthase GO:0009058 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 Pfam PF00425 chorismate binding enzyme 193 446 9.6E-98 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 PRINTS PR00095 Anthranilate synthase component I signature 308 321 2.0E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 PRINTS PR00095 Anthranilate synthase component I signature 403 417 2.0E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 PRINTS PR00095 Anthranilate synthase component I signature 294 307 2.0E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 PRINTS PR00095 Anthranilate synthase component I signature 388 402 2.0E-15 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c11310 b598d473a51813577f0073725fd46bf5 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 99 449 9.6E-107 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CLSA_c12800 66dcd2af37ecbe4ea865e0f1e727841c 139 SUPERFAMILY SSF158397 23 138 3.4E-34 T 12-10-2018 IPR024042 TM1646-like domain superfamily CLSA_c12800 66dcd2af37ecbe4ea865e0f1e727841c 139 Pfam PF03885 Protein of unknown function (DUF327) 15 138 4.2E-37 T 12-10-2018 IPR005585 Protein of unknown function DUF327 CLSA_c12800 66dcd2af37ecbe4ea865e0f1e727841c 139 Gene3D G3DSA:1.20.120.490 23 139 5.4E-30 T 12-10-2018 IPR024042 TM1646-like domain superfamily CLSA_c27000 95729737cfa6872726f617cee36224d7 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CLSA_c27000 95729737cfa6872726f617cee36224d7 185 SUPERFAMILY SSF50249 65 129 1.11E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.1E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 SUPERFAMILY SSF50249 128 185 5.74E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Gene3D G3DSA:2.40.50.140 64 127 1.0E-26 T 12-10-2018 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 SMART SM00841 129 184 8.5E-33 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 2.2E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 PIRSF PIRSF005901 1 185 4.2E-69 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Gene3D G3DSA:2.30.30.30 1 63 2.9E-27 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 3.4E-77 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 SUPERFAMILY SSF50104 1 62 3.55E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.0E-25 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like CLSA_c27000 95729737cfa6872726f617cee36224d7 185 SMART SM01185 67 121 3.2E-26 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.839 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CLSA_c27000 95729737cfa6872726f617cee36224d7 185 Gene3D G3DSA:2.40.50.140 128 185 4.1E-28 T 12-10-2018 CLSA_c15210 21e4801acc96c1d7bb23aaea2e22cfd4 466 Gene3D G3DSA:3.40.605.10 20 437 1.5E-171 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c15210 21e4801acc96c1d7bb23aaea2e22cfd4 466 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 216 223 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CLSA_c15210 21e4801acc96c1d7bb23aaea2e22cfd4 466 PIRSF PIRSF036492 2 466 5.8E-189 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 CLSA_c15210 21e4801acc96c1d7bb23aaea2e22cfd4 466 Gene3D G3DSA:3.40.309.10 220 417 1.5E-171 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c15210 21e4801acc96c1d7bb23aaea2e22cfd4 466 Pfam PF00171 Aldehyde dehydrogenase family 9 437 3.9E-82 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c15210 21e4801acc96c1d7bb23aaea2e22cfd4 466 SUPERFAMILY SSF53720 10 454 7.46E-118 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c09870 b8f59a2ae0ac2bde1c7e5d8dc68b3c72 460 PIRSF PIRSF006351 4 454 3.6E-121 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CLSA_c09870 b8f59a2ae0ac2bde1c7e5d8dc68b3c72 460 Pfam PF02378 Phosphotransferase system, EIIC 36 371 2.4E-47 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c09870 b8f59a2ae0ac2bde1c7e5d8dc68b3c72 460 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 445 3.0E-88 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CLSA_c06560 1d202277234a8ca0adf9604a73812639 180 Pfam PF14319 Transposase zinc-binding domain 11 121 5.6E-34 T 12-10-2018 IPR026889 Transposase zinc-binding domain CLSA_c06560 1d202277234a8ca0adf9604a73812639 180 Pfam PF04986 Putative transposase 147 178 1.1E-8 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 SUPERFAMILY SSF63520 464 569 7.98E-14 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 SUPERFAMILY SSF63520 832 923 7.85E-8 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 SMART SM00382 132 286 7.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 SUPERFAMILY SSF52540 114 344 1.17E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Gene3D G3DSA:1.10.1790.10 470 567 9.0E-10 T 12-10-2018 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Pfam PF00158 Sigma-54 interaction domain 109 275 2.2E-47 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 SUPERFAMILY SSF53062 574 690 1.18E-18 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 205 220 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Gene3D G3DSA:3.40.50.300 99 285 3.3E-41 T 12-10-2018 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Gene3D G3DSA:3.40.50.510 571 706 3.7E-39 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Pfam PF00874 PRD domain 479 565 3.0E-10 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Pfam PF00874 PRD domain 844 925 3.3E-5 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c44680 d6e393a121bd5799e661f7df0121ed82 928 Pfam PF03610 PTS system fructose IIA component 576 675 7.4E-15 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 SUPERFAMILY SSF46785 149 220 3.34E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 SUPERFAMILY SSF51206 1 145 1.7E-34 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 Pfam PF13545 Crp-like helix-turn-helix domain 155 222 8.2E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 Gene3D G3DSA:2.60.120.1460 1 220 3.2E-68 T 12-10-2018 CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 SMART SM00419 168 216 9.6E-4 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 7.9E-17 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c10390 ab19d1afe8eb56394f3e7a2ab74ee388 226 SMART SM00100 13 134 8.4E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 Gene3D G3DSA:2.10.270.10 30 94 1.4E-9 T 12-10-2018 CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 SUPERFAMILY SSF52058 130 258 7.74E-16 T 12-10-2018 CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 Gene3D G3DSA:3.80.10.10 195 268 4.4E-19 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 SUPERFAMILY SSF69360 32 84 2.22E-10 T 12-10-2018 CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 Gene3D G3DSA:3.80.10.10 95 194 2.8E-24 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 Pfam PF13306 Leucine rich repeats (6 copies) 132 237 4.3E-38 T 12-10-2018 IPR026906 Leucine rich repeat 5 CLSA_c20160 9dbe123c57a6a6899cb0545cc78a9b1a 270 Pfam PF01473 Putative cell wall binding repeat 49 67 0.0049 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Pfam PF13307 Helicase C-terminal domain 594 754 1.1E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Pfam PF06777 Helical and beta-bridge domain 489 570 1.6E-10 T 12-10-2018 IPR010643 Helical and beta-bridge domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-2564830|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 SMART SM00488 184 422 2.5E-6 T 12-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 SUPERFAMILY SSF52540 148 539 1.12E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Gene3D G3DSA:3.90.320.10 7 177 6.5E-6 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Gene3D G3DSA:3.40.50.300 564 760 5.2E-49 T 12-10-2018 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Gene3D G3DSA:3.40.50.300 207 548 4.5E-51 T 12-10-2018 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Gene3D G3DSA:1.10.275.40 392 515 4.5E-51 T 12-10-2018 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Pfam PF06733 DEAD_2 280 398 4.5E-14 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 SMART SM00491 610 743 3.0E-13 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 SUPERFAMILY SSF52540 521 673 1.45E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43300 c21ea96eadff4ce3d067cc8a193f16e3 765 Gene3D G3DSA:1.10.30.20 278 337 4.5E-51 T 12-10-2018 CLSA_c10240 e2d57292c7da37980cbb96f61358f8c8 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 182 202 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLSA_c10240 e2d57292c7da37980cbb96f61358f8c8 381 Gene3D G3DSA:3.90.1150.10 10 367 7.5E-110 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c10240 e2d57292c7da37980cbb96f61358f8c8 381 PIRSF PIRSF000524 1 380 4.0E-95 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 CLSA_c10240 e2d57292c7da37980cbb96f61358f8c8 381 Pfam PF00266 Aminotransferase class-V 30 299 3.7E-27 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c10240 e2d57292c7da37980cbb96f61358f8c8 381 Gene3D G3DSA:3.40.640.10 15 260 7.5E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c10240 e2d57292c7da37980cbb96f61358f8c8 381 SUPERFAMILY SSF53383 4 365 3.27E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c28000 961f1544575bf9e7cea0c391c5cedaff 403 Gene3D G3DSA:1.20.1740.10 1 403 2.2E-42 T 12-10-2018 CLSA_c28000 961f1544575bf9e7cea0c391c5cedaff 403 Pfam PF13520 Amino acid permease 5 378 4.8E-25 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c28000 961f1544575bf9e7cea0c391c5cedaff 403 PIRSF PIRSF006060 1 401 1.8E-37 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 SUPERFAMILY SSF46955 7 113 4.76E-27 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 SUPERFAMILY SSF55136 140 272 4.01E-20 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 Gene3D G3DSA:1.10.1660.10 7 126 1.7E-30 T 12-10-2018 CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 Pfam PF13411 MerR HTH family regulatory protein 10 77 4.4E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 SMART SM00422 9 78 2.7E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 Gene3D G3DSA:3.20.80.10 127 275 8.2E-10 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c19420 0c65812cddf6529713d40e1e4cb35f5a 290 Pfam PF06445 GyrI-like small molecule binding domain 189 272 1.5E-10 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 Gene3D G3DSA:1.10.10.10 1 85 1.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 Pfam PF03466 LysR substrate binding domain 89 286 1.6E-26 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 Gene3D G3DSA:3.40.190.290 90 293 6.9E-31 T 12-10-2018 CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 SUPERFAMILY SSF53850 89 287 1.93E-22 T 12-10-2018 CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 SUPERFAMILY SSF46785 1 110 1.09E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c28830 f5c2557b8e5f1cabfd5e120f71743956 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.7E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c03090 1e4736df6c6954a47f448b76297e5c99 411 Gene3D G3DSA:3.40.50.2000 236 395 1.2E-33 T 12-10-2018 CLSA_c03090 1e4736df6c6954a47f448b76297e5c99 411 Gene3D G3DSA:3.40.50.2000 5 235 1.2E-33 T 12-10-2018 CLSA_c03090 1e4736df6c6954a47f448b76297e5c99 411 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 258 379 7.9E-8 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CLSA_c03090 1e4736df6c6954a47f448b76297e5c99 411 SUPERFAMILY SSF53756 1 397 3.45E-35 T 12-10-2018 CLSA_c14390 00593ff29ddee5a0d7caa356f8b65ead 88 Pfam PF04296 Protein of unknown function (DUF448) 9 82 4.2E-31 T 12-10-2018 IPR007393 Domain of unknown function DUF448 CLSA_c14390 00593ff29ddee5a0d7caa356f8b65ead 88 Gene3D G3DSA:3.30.1230.10 1 88 5.8E-37 T 12-10-2018 IPR035931 YlxR-like superfamily CLSA_c14390 00593ff29ddee5a0d7caa356f8b65ead 88 SUPERFAMILY SSF64376 4 87 5.49E-29 T 12-10-2018 IPR035931 YlxR-like superfamily CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 15 452 72.854 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 Gene3D G3DSA:3.40.50.12160 16 151 2.7E-33 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 Gene3D G3DSA:3.80.30.20 158 388 5.3E-94 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 SMART SM00729 160 378 5.5E-61 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 17 448 3.4E-154 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 Pfam PF01938 TRAM domain 389 451 6.9E-15 T 12-10-2018 IPR002792 TRAM domain CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 164 184 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 Pfam PF04055 Radical SAM superfamily 164 336 2.0E-32 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 Pfam PF00919 Uncharacterized protein family UPF0004 17 117 2.7E-29 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 17 451 1.9E-170 T 12-10-2018 CLSA_c22370 d4eda165d8fd1a0eeca7dea40387befd 452 SUPERFAMILY SSF102114 156 382 9.16E-62 T 12-10-2018 CLSA_c11280 236cd32a5e56f7a5936f5ebb8422d700 281 Gene3D G3DSA:3.40.50.1000 25 276 1.9E-70 T 12-10-2018 IPR023214 HAD superfamily CLSA_c11280 236cd32a5e56f7a5936f5ebb8422d700 281 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 24 276 7.1E-52 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c11280 236cd32a5e56f7a5936f5ebb8422d700 281 Gene3D G3DSA:3.30.1240.10 101 206 1.9E-70 T 12-10-2018 CLSA_c11280 236cd32a5e56f7a5936f5ebb8422d700 281 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 24 249 2.4E-30 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c11280 236cd32a5e56f7a5936f5ebb8422d700 281 SUPERFAMILY SSF56784 21 279 2.03E-65 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c11280 236cd32a5e56f7a5936f5ebb8422d700 281 Pfam PF08282 haloacid dehalogenase-like hydrolase 25 276 1.7E-59 T 12-10-2018 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Pfam PF05190 MutS family domain IV 424 515 4.7E-29 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 SUPERFAMILY SSF48334 262 562 6.67E-81 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 SUPERFAMILY SSF53150 113 275 1.57E-27 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Gene3D G3DSA:3.40.50.300 565 885 1.1E-102 T 12-10-2018 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 3 931 24.965 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 SUPERFAMILY SSF55271 2 111 2.62E-40 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Gene3D G3DSA:1.10.1420.10 396 532 5.9E-97 T 12-10-2018 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Gene3D G3DSA:3.40.1170.10 1 116 6.2E-45 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 SUPERFAMILY SSF52540 564 798 3.97E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Gene3D G3DSA:3.30.420.110 123 255 1.0E-19 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 SMART SM00533 279 588 3.5E-96 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Pfam PF00488 MutS domain V 610 798 2.1E-85 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Gene3D G3DSA:1.10.1420.10 261 556 5.9E-97 T 12-10-2018 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 PIRSF PIRSF037677 1 848 6.5E-162 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 3 816 1.4E-297 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 SMART SM00534 606 795 9.4E-118 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Pfam PF05192 MutS domain III 264 556 1.5E-39 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Pfam PF01624 MutS domain I 4 115 1.5E-41 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CLSA_c22640 8fccbeaf25da0dd296d0e329e236d9b7 942 Pfam PF05188 MutS domain II 125 247 1.1E-12 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 PIRSF PIRSF001220 1 328 2.0E-89 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 PIRSF PIRSF500176 1 326 1.0E-96 T 12-10-2018 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 SUPERFAMILY SSF53774 1 330 3.01E-100 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.2E-15 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 2.2E-15 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 2.2E-15 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 Pfam PF00710 Asparaginase, N-terminal 3 187 3.3E-58 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 SMART SM00870 3 317 1.4E-113 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 Gene3D G3DSA:3.40.50.1170 1 199 3.0E-63 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 Gene3D G3DSA:3.40.50.40 200 330 1.2E-44 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CLSA_c27910 66d8d143743d14427dddc07322715e0c 331 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 329 8.6E-103 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 5 1241 0.0 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1062 1233 6.4E-10 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 3 1243 19.369 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 SUPERFAMILY SSF52980 1029 1237 1.23E-34 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Pfam PF13361 UvrD-like helicase C-terminal domain 468 898 3.7E-32 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Gene3D G3DSA:3.40.50.300 296 470 4.8E-30 T 12-10-2018 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Gene3D G3DSA:3.40.50.300 1 182 1.5E-39 T 12-10-2018 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Gene3D G3DSA:3.40.50.300 775 976 5.7E-47 T 12-10-2018 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Gene3D G3DSA:3.40.50.300 471 774 1.8E-49 T 12-10-2018 CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 SUPERFAMILY SSF52540 4 902 2.34E-113 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Gene3D G3DSA:3.90.320.10 1007 1243 3.4E-63 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLSA_c00240 be13a22497a43d3a4981a64ed23e7414 1243 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 459 3.2E-79 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CLSA_c21940 486f13198471f0fc58d09822b24151ca 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 11 455 4.1E-121 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 CLSA_c21940 486f13198471f0fc58d09822b24151ca 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 6 472 45.459 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 Pfam PF00206 Lyase 18 339 1.1E-79 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 Gene3D G3DSA:1.20.200.10 138 405 6.2E-101 T 12-10-2018 CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 3.8E-27 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 3.8E-27 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.8E-27 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 3.8E-27 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 Pfam PF10415 Fumarase C C-terminus 407 458 2.2E-17 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 Gene3D G3DSA:1.10.275.10 4 137 1.6E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 SUPERFAMILY SSF48557 3 459 1.46E-128 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CLSA_c18600 2eed59aaa0037765389016511a55ace4 465 Gene3D G3DSA:1.10.40.30 407 457 2.9E-16 T 12-10-2018 CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 Gene3D G3DSA:1.10.10.10 1 50 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 SUPERFAMILY SSF46785 1 60 7.31E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.2E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.2E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.2E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 Pfam PF01037 Lrp/AsnC ligand binding domain 68 137 2.2E-18 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 SMART SM00344 1 108 1.6E-31 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 8.9E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 SUPERFAMILY SSF54909 62 142 6.44E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c30950 0955a6617595399fdb969e8b27bc6b9a 151 Gene3D G3DSA:3.30.70.920 51 144 2.0E-24 T 12-10-2018 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 5.1E-22 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 374 1.9E-50 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 SUPERFAMILY SSF47203 226 378 7.89E-55 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 PIRSF PIRSF016578 1 377 3.3E-16 T 12-10-2018 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 SUPERFAMILY SSF56645 2 238 3.53E-69 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 6.8E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 Gene3D G3DSA:2.40.110.10 120 231 3.4E-40 T 12-10-2018 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 Gene3D G3DSA:1.10.540.10 3 117 9.8E-29 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CLSA_c22580 f286a64b1eb42b8b2a39c26fd2d86e40 380 Gene3D G3DSA:1.20.140.10 232 380 2.4E-55 T 12-10-2018 CLSA_c39860 71bdf880485770f88a0aa6d11520a472 244 Gene3D G3DSA:3.20.10.10 92 237 2.6E-34 T 12-10-2018 CLSA_c39860 71bdf880485770f88a0aa6d11520a472 244 ProSitePatterns PS00770 Aminotransferases class-IV signature. 141 169 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 CLSA_c39860 71bdf880485770f88a0aa6d11520a472 244 Pfam PF01063 Amino-transferase class IV 6 214 9.3E-45 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CLSA_c39860 71bdf880485770f88a0aa6d11520a472 244 Gene3D G3DSA:3.30.470.10 2 80 3.0E-13 T 12-10-2018 CLSA_c39860 71bdf880485770f88a0aa6d11520a472 244 SUPERFAMILY SSF56752 6 239 7.85E-47 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 SUPERFAMILY SSF51445 8 478 4.6E-173 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 1.2E-19 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 1.2E-19 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 1.2E-19 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.2E-19 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 1.2E-19 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 Gene3D G3DSA:3.20.20.80 3 479 6.8E-181 T 12-10-2018 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 Pfam PF00232 Glycosyl hydrolase family 1 7 476 2.5E-178 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c09920 8b0b13fdafadbc395e67323b5141fc84 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLSA_c09130 30219842d8a1af355811d72fe4a3459c 172 Gene3D G3DSA:1.20.140.160 39 172 2.0E-9 T 12-10-2018 CLSA_c09130 30219842d8a1af355811d72fe4a3459c 172 SUPERFAMILY SSF88659 96 168 2.8E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c09130 30219842d8a1af355811d72fe4a3459c 172 Pfam PF04545 Sigma-70, region 4 121 166 3.1E-6 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c33230 be3560e45e32398a6f1d1806b2f62cf8 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 319 5.9E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 SUPERFAMILY SSF55347 126 262 2.22E-61 T 12-10-2018 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 SUPERFAMILY SSF69055 291 384 1.44E-29 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 Gene3D G3DSA:3.40.50.720 1 150 2.8E-52 T 12-10-2018 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 229 3.8E-40 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 132 3.7E-42 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 383 6.5E-148 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 SUPERFAMILY SSF51735 2 150 1.3E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 PIRSF PIRSF006205 1 386 1.8E-161 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 Gene3D G3DSA:1.10.1740.10 302 386 1.7E-25 T 12-10-2018 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 384 46.584 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c14170 01071790b61c3746c1a8a965bd05f622 386 Pfam PF13288 DXP reductoisomerase C-terminal domain 261 379 5.4E-39 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 642 2.8E-276 T 12-10-2018 IPR006250 Aconitase, putative CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 SUPERFAMILY SSF52016 442 642 1.55E-54 T 12-10-2018 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 Pfam PF00330 Aconitase family (aconitate hydratase) 8 407 6.3E-109 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 SUPERFAMILY SSF53732 2 415 4.19E-144 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 Gene3D G3DSA:3.20.19.10 460 643 5.3E-49 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 Pfam PF00694 Aconitase C-terminal domain 517 578 1.4E-23 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 Gene3D G3DSA:3.30.499.20 4 267 1.0E-83 T 12-10-2018 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 PRINTS PR00415 Aconitase family signature 186 199 8.8E-23 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 PRINTS PR00415 Aconitase family signature 200 213 8.8E-23 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 PRINTS PR00415 Aconitase family signature 110 123 8.8E-23 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 PRINTS PR00415 Aconitase family signature 90 98 8.8E-23 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 PRINTS PR00415 Aconitase family signature 124 139 8.8E-23 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 PRINTS PR00415 Aconitase family signature 349 362 8.8E-23 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 Gene3D G3DSA:3.30.499.10 270 452 1.9E-51 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CLSA_c34830 403939fb6fd81928de6375c25250d6c7 644 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLSA_c42960 368392f8531b5fb4b068d3e2bbf316c4 294 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 285 41.472 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 CLSA_c42960 368392f8531b5fb4b068d3e2bbf316c4 294 SUPERFAMILY SSF52540 2 156 2.72E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42960 368392f8531b5fb4b068d3e2bbf316c4 294 Pfam PF03668 P-loop ATPase protein family 1 284 5.9E-104 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 CLSA_c42960 368392f8531b5fb4b068d3e2bbf316c4 294 Gene3D G3DSA:3.40.50.300 2 157 2.9E-7 T 12-10-2018 CLSA_c42960 368392f8531b5fb4b068d3e2bbf316c4 294 PIRSF PIRSF005052 1 288 2.0E-112 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 CLSA_c09570 e29ab68989a304fdd3fc500b13ae9bb4 739 SUPERFAMILY SSF55486 522 727 3.22E-18 T 12-10-2018 CLSA_c09570 e29ab68989a304fdd3fc500b13ae9bb4 739 Gene3D G3DSA:1.10.390.60 491 738 9.5E-25 T 12-10-2018 CLSA_c09570 e29ab68989a304fdd3fc500b13ae9bb4 739 Pfam PF01433 Peptidase family M1 domain 521 730 1.0E-12 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 221 231 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 SUPERFAMILY SSF52799 33 302 2.97E-29 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 Pfam PF14566 Inositol hexakisphosphate 108 241 1.1E-20 T 12-10-2018 CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 SMART SM01301 108 241 5.4E-47 T 12-10-2018 CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 Gene3D G3DSA:3.90.190.10 52 299 2.2E-77 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 Gene3D G3DSA:3.30.70.1690 130 192 2.2E-77 T 12-10-2018 CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 ProDom PD069361 HYDROLASE VIRULENCE PLASMID AVRBS1.1 HEXAPHOSPHATE TYROSINE PHOSPHOHYDROLASE PRECURSOR MYO-INOSITOL AVIRULENCE 214 299 3.0E-12 T 12-10-2018 CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 Gene3D G3DSA:3.20.20.490 566 822 2.3E-82 T 12-10-2018 IPR038410 GxGYxYP putative glycoside hydrolase, C-terminal domain superfamily CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 Pfam PF16216 GxGYxY sequence motif in domain of unknown function N-terminal 349 561 7.4E-74 T 12-10-2018 IPR032626 GxGYxYP putative glycoside hydrolase, N-terminal CLSA_c37580 d59858848b9748feb97e8708252db1ac 823 Pfam PF14323 GxGYxYP putative glycoside hydrolase C-terminal domain 580 817 3.5E-80 T 12-10-2018 IPR025832 GxGYxYP putative glycoside hydrolase, C-terminal CLSA_c00500 bbc41a45c41b9910bca3064b50e2fce0 122 PIRSF PIRSF014543 1 122 2.6E-25 T 12-10-2018 IPR016621 Uncharacterised conserved protein UCP014543 CLSA_c00500 bbc41a45c41b9910bca3064b50e2fce0 122 Pfam PF12646 Domain of unknown function (DUF3783) 61 115 3.1E-14 T 12-10-2018 IPR016621 Uncharacterised conserved protein UCP014543 CLSA_c17040 10dcc5d8b4ddc95ecd92f81cbf884707 421 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 226 376 2.8E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c17040 10dcc5d8b4ddc95ecd92f81cbf884707 421 Gene3D G3DSA:1.10.287.950 87 421 3.5E-51 T 12-10-2018 CLSA_c17040 10dcc5d8b4ddc95ecd92f81cbf884707 421 SUPERFAMILY SSF58104 95 419 3.01E-51 T 12-10-2018 CLSA_c17040 10dcc5d8b4ddc95ecd92f81cbf884707 421 SMART SM00283 148 416 1.6E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c01490 a3db1b3fb6e97cdc49d0977410d17b02 340 SUPERFAMILY SSF69304 65 265 3.79E-9 T 12-10-2018 CLSA_c01490 a3db1b3fb6e97cdc49d0977410d17b02 340 Gene3D G3DSA:2.120.10.30 87 289 7.7E-6 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CLSA_c01490 a3db1b3fb6e97cdc49d0977410d17b02 340 Pfam PF16472 Domain of unknown function (DUF5050) 118 330 5.4E-25 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 PRINTS PR00050 Cold shock protein signature 6 21 5.2E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 PRINTS PR00050 Cold shock protein signature 42 60 5.2E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 PRINTS PR00050 Cold shock protein signature 26 35 5.2E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 SUPERFAMILY SSF50249 4 68 3.92E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 SMART SM00357 5 69 3.9E-20 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 12-10-2018 IPR019844 Cold-shock conserved site CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 Gene3D G3DSA:2.40.50.140 4 67 1.9E-25 T 12-10-2018 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 PIRSF PIRSF002599 1 69 6.0E-21 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 CLSA_c26110 a366ce64262cf466ce02c5309942b8f0 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.7E-23 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 Gene3D G3DSA:1.10.287.950 213 515 2.7E-78 T 12-10-2018 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 SMART SM00283 266 513 3.5E-76 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 7.1E-30 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 480 8.7E-48 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 SUPERFAMILY SSF58104 233 514 3.01E-66 T 12-10-2018 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 SMART SM00304 213 265 5.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 1.7E-42 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 1.7E-42 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 1.7E-42 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.7E-42 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 1.7E-42 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24210 24979bdca94853f58d8fcf0785c49b9e 573 Pfam PF00672 HAMP domain 213 258 2.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c36920 5fad62b963d7658dfcd37bb8e997fedd 191 Pfam PF11188 Protein of unknown function (DUF2975) 77 191 1.3E-11 T 12-10-2018 IPR021354 Protein of unknown function DUF2975 CLSA_c24430 558c9ad097253705da70f9ed0d27d2d1 268 Gene3D G3DSA:3.60.15.10 10 264 2.9E-59 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c24430 558c9ad097253705da70f9ed0d27d2d1 268 Pfam PF00753 Metallo-beta-lactamase superfamily 33 163 1.5E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c24430 558c9ad097253705da70f9ed0d27d2d1 268 SMART SM00849 34 215 1.8E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c24430 558c9ad097253705da70f9ed0d27d2d1 268 SUPERFAMILY SSF56281 15 170 2.23E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c32710 4a6cca028b52167b9a64d58c799ff21c 251 Pfam PF00005 ABC transporter 18 166 6.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c32710 4a6cca028b52167b9a64d58c799ff21c 251 Gene3D G3DSA:3.40.50.300 1 249 4.7E-63 T 12-10-2018 CLSA_c32710 4a6cca028b52167b9a64d58c799ff21c 251 SMART SM00382 26 215 1.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c32710 4a6cca028b52167b9a64d58c799ff21c 251 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c32710 4a6cca028b52167b9a64d58c799ff21c 251 SUPERFAMILY SSF52540 2 230 1.21E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09650 6ae67bee69cb3fccf3298eebe4930e1b 268 Pfam PF03609 PTS system sorbose-specific iic component 5 239 4.1E-70 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CLSA_c01690 419694b9cc3687940bedbdeb0484c43f 193 PIRSF PIRSF015034 1 177 3.5E-61 T 12-10-2018 IPR025542 YacH protein CLSA_c01690 419694b9cc3687940bedbdeb0484c43f 193 SUPERFAMILY SSF46600 134 168 3.14E-5 T 12-10-2018 IPR036876 UVR domain superfamily CLSA_c01690 419694b9cc3687940bedbdeb0484c43f 193 Pfam PF02151 UvrB/uvrC motif 134 166 3.9E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 CLSA_c21160 902de45a6b3b0ee678ff40c380132196 316 SUPERFAMILY SSF158430 8 188 1.26E-36 T 12-10-2018 CLSA_c21160 902de45a6b3b0ee678ff40c380132196 316 Pfam PF11155 Domain of unknown function (DUF2935) 9 177 1.9E-43 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 CLSA_c21160 902de45a6b3b0ee678ff40c380132196 316 Pfam PF11155 Domain of unknown function (DUF2935) 191 303 2.3E-35 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 CLSA_c21160 902de45a6b3b0ee678ff40c380132196 316 SUPERFAMILY SSF158430 182 306 1.44E-38 T 12-10-2018 CLSA_c27620 71da59fe3dd3ccc30b3eac2a637a0b64 657 Gene3D G3DSA:3.30.70.2330 535 638 5.5E-21 T 12-10-2018 CLSA_c27620 71da59fe3dd3ccc30b3eac2a637a0b64 657 SMART SM00910 538 637 1.2E-11 T 12-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 CLSA_c27620 71da59fe3dd3ccc30b3eac2a637a0b64 657 Pfam PF08797 HIRAN domain 543 634 5.0E-8 T 12-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 CLSA_c05050 f780b614193da76df9bb6a0e9b6d6f47 209 Pfam PF14681 Uracil phosphoribosyltransferase 8 208 2.3E-73 T 12-10-2018 CLSA_c05050 f780b614193da76df9bb6a0e9b6d6f47 209 Gene3D G3DSA:3.40.50.2020 1 209 2.1E-81 T 12-10-2018 CLSA_c05050 f780b614193da76df9bb6a0e9b6d6f47 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.5 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLSA_c05050 f780b614193da76df9bb6a0e9b6d6f47 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 2.8E-91 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLSA_c05050 f780b614193da76df9bb6a0e9b6d6f47 209 SUPERFAMILY SSF53271 4 207 2.49E-72 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c10250 c813c4224ebf2fd47c57d1a039dc82a9 177 Gene3D G3DSA:1.10.1760.20 8 176 7.0E-50 T 12-10-2018 CLSA_c10250 c813c4224ebf2fd47c57d1a039dc82a9 177 Pfam PF07155 ECF-type riboflavin transporter, S component 9 172 3.1E-52 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLSA_c25180 83199c24effd8df9199fec6a362f8fdb 223 Gene3D G3DSA:1.20.1260.10 1 184 2.7E-66 T 12-10-2018 IPR012347 Ferritin-like CLSA_c25180 83199c24effd8df9199fec6a362f8fdb 223 Pfam PF05067 Manganese containing catalase 1 188 4.5E-56 T 12-10-2018 IPR007760 Manganese catalase CLSA_c25180 83199c24effd8df9199fec6a362f8fdb 223 SUPERFAMILY SSF47240 1 221 1.07E-75 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 SUPERFAMILY SSF55957 445 571 7.85E-15 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 206 315 1.3E-23 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 491 545 5.5E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Gene3D G3DSA:3.40.120.10 323 450 5.3E-34 T 12-10-2018 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 SUPERFAMILY SSF53738 302 453 2.16E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 178 2.2E-39 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Gene3D G3DSA:3.40.120.10 32 184 9.1E-46 T 12-10-2018 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Gene3D G3DSA:3.30.310.50 459 567 7.7E-10 T 12-10-2018 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Gene3D G3DSA:3.40.120.10 205 322 3.4E-23 T 12-10-2018 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 137 146 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 SUPERFAMILY SSF53738 29 234 3.02E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 SUPERFAMILY SSF53738 205 315 1.18E-21 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c42240 3ce60e49cb1e6dd542ddc75ac4830f57 575 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 436 3.7E-22 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLSA_c04180 15c3c8fe5c925852a5f8d49e86691340 80 Gene3D G3DSA:2.10.260.10 1 55 9.2E-22 T 12-10-2018 CLSA_c04180 15c3c8fe5c925852a5f8d49e86691340 80 SUPERFAMILY SSF89447 1 53 9.81E-15 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily CLSA_c04180 15c3c8fe5c925852a5f8d49e86691340 80 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 1.3E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c04180 15c3c8fe5c925852a5f8d49e86691340 80 SMART SM00966 8 51 1.3E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c04180 15c3c8fe5c925852a5f8d49e86691340 80 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 13 50 9.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c16540 5c545408e97eacb30b0b7349976866ae 151 SMART SM00871 1 151 3.7E-29 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding CLSA_c16540 5c545408e97eacb30b0b7349976866ae 151 SUPERFAMILY SSF55136 3 150 2.09E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c16540 5c545408e97eacb30b0b7349976866ae 151 Gene3D G3DSA:3.20.80.10 1 151 4.0E-34 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c16540 5c545408e97eacb30b0b7349976866ae 151 Pfam PF06445 GyrI-like small molecule binding domain 3 150 1.0E-26 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain CLSA_c01010 ad8aba2e24fe615c11435f30f2f7889d 232 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 193 6.8E-20 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CLSA_c01010 ad8aba2e24fe615c11435f30f2f7889d 232 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 192 2.9E-29 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CLSA_c01010 ad8aba2e24fe615c11435f30f2f7889d 232 SUPERFAMILY SSF56300 1 226 1.4E-55 T 12-10-2018 CLSA_c01010 ad8aba2e24fe615c11435f30f2f7889d 232 PIRSF PIRSF000883 1 230 3.2E-59 T 12-10-2018 IPR011152 Phosphoesterase MJ0912 CLSA_c01010 ad8aba2e24fe615c11435f30f2f7889d 232 Gene3D G3DSA:3.60.21.10 1 232 9.2E-64 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c39540 1180cfe45bfe6fde27ba7d240de67596 236 SUPERFAMILY SSF51161 77 235 1.57E-32 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c39540 1180cfe45bfe6fde27ba7d240de67596 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 62 92 0.12 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c39540 1180cfe45bfe6fde27ba7d240de67596 236 Gene3D G3DSA:2.160.10.10 32 122 2.4E-11 T 12-10-2018 CLSA_c39540 1180cfe45bfe6fde27ba7d240de67596 236 Gene3D G3DSA:2.160.10.10 123 234 5.8E-29 T 12-10-2018 CLSA_c39540 1180cfe45bfe6fde27ba7d240de67596 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 182 216 4.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c39540 1180cfe45bfe6fde27ba7d240de67596 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 126 159 4.9E-5 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c05190 105e6cd4e0a640cd389221b03bad1125 346 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 73 341 3.3E-84 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 CLSA_c05190 105e6cd4e0a640cd389221b03bad1125 346 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 13 343 2.3E-114 T 12-10-2018 IPR014225 Sporulation stage II, protein D firmicutes CLSA_c05190 105e6cd4e0a640cd389221b03bad1125 346 Pfam PF08486 Stage II sporulation protein 69 174 2.7E-30 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 SUPERFAMILY SSF51445 7 468 3.25E-164 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 Gene3D G3DSA:3.20.20.80 2 470 5.6E-165 T 12-10-2018 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 Pfam PF00232 Glycosyl hydrolase family 1 7 467 3.7E-155 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 374 1.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 1.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 1.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 425 1.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 366 374 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site CLSA_c41400 88c3a801b18e08730f1403ab6da5c77c 470 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLSA_c08310 3a32268e6a76b052614751f5591d59fa 472 SUPERFAMILY SSF69279 12 175 1.36E-26 T 12-10-2018 CLSA_c08310 3a32268e6a76b052614751f5591d59fa 472 Gene3D G3DSA:2.30.110.50 73 99 2.5E-6 T 12-10-2018 CLSA_c08310 3a32268e6a76b052614751f5591d59fa 472 Gene3D G3DSA:3.55.50.10 100 165 2.5E-6 T 12-10-2018 CLSA_c08310 3a32268e6a76b052614751f5591d59fa 472 Pfam PF05954 Phage late control gene D protein (GPD) 75 168 3.2E-6 T 12-10-2018 CLSA_c33050 bb7a288b51bf0759db8f9393b1f894c1 286 Gene3D G3DSA:3.30.240.20 170 227 4.2E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c33050 bb7a288b51bf0759db8f9393b1f894c1 286 Pfam PF07870 Protein of unknown function (DUF1657) 237 284 1.5E-18 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 CLSA_c33050 bb7a288b51bf0759db8f9393b1f894c1 286 Gene3D G3DSA:3.30.240.20 80 154 2.0E-21 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c33050 bb7a288b51bf0759db8f9393b1f894c1 286 Pfam PF04239 Protein of unknown function (DUF421) 89 204 3.1E-29 T 12-10-2018 IPR007353 Protein of unknown function DUF421 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 457 4.9E-60 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 Gene3D G3DSA:1.10.1040.10 271 481 1.7E-55 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 482 56.92 T 12-10-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 Gene3D G3DSA:3.40.50.720 2 267 6.5E-58 T 12-10-2018 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 171 2.5E-25 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 PRINTS PR00084 Mannitol dehydrogenase signature 204 217 4.5E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 PRINTS PR00084 Mannitol dehydrogenase signature 163 176 4.5E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 PRINTS PR00084 Mannitol dehydrogenase signature 234 249 4.5E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 PRINTS PR00084 Mannitol dehydrogenase signature 18 28 4.5E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 SUPERFAMILY SSF48179 272 481 1.26E-44 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c19530 a7eec7a926c4475c09ae785073c25475 482 SUPERFAMILY SSF51735 11 267 2.56E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c09410 4a46692d920cb0a5e3e86a8a10f418ca 423 SUPERFAMILY SSF51011 325 420 1.32E-25 T 12-10-2018 CLSA_c09410 4a46692d920cb0a5e3e86a8a10f418ca 423 Gene3D G3DSA:3.20.20.80 47 329 5.8E-172 T 12-10-2018 CLSA_c09410 4a46692d920cb0a5e3e86a8a10f418ca 423 SUPERFAMILY SSF51445 46 329 3.78E-52 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c09410 4a46692d920cb0a5e3e86a8a10f418ca 423 Gene3D G3DSA:2.60.40.1180 36 419 5.8E-172 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c09410 4a46692d920cb0a5e3e86a8a10f418ca 423 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 102 176 8.3E-6 T 12-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 SUPERFAMILY SSF47928 2 105 3.66E-22 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 174 1.4E-43 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 172 8.5E-37 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 Gene3D G3DSA:1.10.520.20 5 97 4.6E-13 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.8E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.8E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.8E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.8E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 PRINTS PR00125 ATP synthase delta subunit signature 5 24 1.8E-22 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05120 cfddb97a282aafa3663c23ecb3ffd6e7 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 18.713 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 Pfam PF07549 SecD/SecF GG Motif 25 47 1.9E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 SUPERFAMILY SSF82866 110 282 2.22E-35 T 12-10-2018 CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 Pfam PF02355 Protein export membrane protein 104 279 1.4E-58 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 72 267 3.8E-45 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 Gene3D G3DSA:1.20.1640.10 85 290 3.6E-11 T 12-10-2018 CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 281 26.98 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 PRINTS PR01755 Bacterial translocase SecF protein signature 29 44 3.6E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 PRINTS PR01755 Bacterial translocase SecF protein signature 219 234 3.6E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 PRINTS PR01755 Bacterial translocase SecF protein signature 187 205 3.6E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 PRINTS PR01755 Bacterial translocase SecF protein signature 139 153 3.6E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLSA_c28720 4f780d45ca34dc22dfa386eb3edb37d6 291 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 30 270 2.2E-66 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:3.30.70.1430 40 797 0.0 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:3.30.70.1440 647 845 0.0 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82866 791 1008 2.09E-48 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:3.30.2090.10 698 789 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82693 558 648 8.02E-8 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:1.20.1640.10 10 504 0.0 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82693 141 322 3.4E-18 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:3.30.70.1320 134 324 0.0 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82866 288 488 3.53E-46 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 4.0E-53 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Pfam PF00873 AcrB/AcrD/AcrF family 3 1005 8.3E-280 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82693 40 134 1.05E-22 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:3.30.70.1430 559 646 0.0 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82714 699 783 4.19E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 SUPERFAMILY SSF82714 181 264 1.31E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:1.20.1640.10 505 1002 0.0 T 12-10-2018 CLSA_c37540 a585227d12eec2d9118dbf3917c51c64 1033 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 SUPERFAMILY SSF54106 475 520 2.22E-11 T 12-10-2018 CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 Gene3D G3DSA:3.10.350.10 462 523 3.9E-17 T 12-10-2018 IPR036779 LysM domain superfamily CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 Pfam PF01476 LysM domain 477 520 1.9E-13 T 12-10-2018 IPR018392 LysM domain CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 Pfam PF12673 Domain of unknown function (DUF3794) 194 268 6.4E-13 T 12-10-2018 IPR024300 Domain of unknown function DUF3794 CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 Pfam PF12673 Domain of unknown function (DUF3794) 352 429 1.4E-16 T 12-10-2018 IPR024300 Domain of unknown function DUF3794 CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 Pfam PF12673 Domain of unknown function (DUF3794) 43 123 8.5E-13 T 12-10-2018 IPR024300 Domain of unknown function DUF3794 CLSA_c04870 eacb67ad13181d9952d09dc3c0f5b317 525 SMART SM00257 476 520 9.3E-14 T 12-10-2018 IPR018392 LysM domain CLSA_c12810 ba7dfa975c1161253a56b9d7956ff156 333 Pfam PF09084 NMT1/THI5 like 67 264 4.1E-9 T 12-10-2018 IPR015168 SsuA/THI5-like CLSA_c12810 ba7dfa975c1161253a56b9d7956ff156 333 PIRSF PIRSF027386 1 333 3.7E-121 T 12-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type CLSA_c12810 ba7dfa975c1161253a56b9d7956ff156 333 Gene3D G3DSA:3.40.190.10 43 328 2.5E-80 T 12-10-2018 CLSA_c12810 ba7dfa975c1161253a56b9d7956ff156 333 SUPERFAMILY SSF53850 64 288 2.22E-25 T 12-10-2018 CLSA_c12810 ba7dfa975c1161253a56b9d7956ff156 333 Gene3D G3DSA:3.40.190.10 119 228 2.5E-80 T 12-10-2018 CLSA_c09630 9ed9ddedb50376048097957fa5c5dc0b 243 Gene3D G3DSA:3.40.50.1360 1 243 8.8E-92 T 12-10-2018 CLSA_c09630 9ed9ddedb50376048097957fa5c5dc0b 243 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CLSA_c09630 9ed9ddedb50376048097957fa5c5dc0b 243 SUPERFAMILY SSF100950 2 238 5.23E-87 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c09630 9ed9ddedb50376048097957fa5c5dc0b 243 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 228 1.0E-22 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CLSA_c09630 9ed9ddedb50376048097957fa5c5dc0b 243 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 2 240 5.7E-87 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CLSA_c09630 9ed9ddedb50376048097957fa5c5dc0b 243 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 41.146 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 Gene3D G3DSA:1.10.8.100 213 278 2.4E-23 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 Pfam PF00398 Ribosomal RNA adenine dimethylase 17 276 7.3E-62 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 SMART SM00650 33 205 1.6E-74 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 49 76 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 Gene3D G3DSA:3.40.50.150 3 209 1.5E-71 T 12-10-2018 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 17 277 54.849 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 17 274 1.0E-86 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CLSA_c00770 6c53befb8c020824360aabb26290cb6d 283 SUPERFAMILY SSF53335 14 279 3.04E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c09560 21fd4baac7ed28a07da90b39a4ac7dd9 292 Pfam PF00005 ABC transporter 24 165 2.4E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c09560 21fd4baac7ed28a07da90b39a4ac7dd9 292 Gene3D G3DSA:3.40.50.300 1 237 2.8E-68 T 12-10-2018 CLSA_c09560 21fd4baac7ed28a07da90b39a4ac7dd9 292 SMART SM00382 33 215 2.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c09560 21fd4baac7ed28a07da90b39a4ac7dd9 292 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c09560 21fd4baac7ed28a07da90b39a4ac7dd9 292 SUPERFAMILY SSF52540 7 225 1.67E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15130 9178bc07a2a98d3d881d244777ba3bf1 396 Gene3D G3DSA:3.40.640.10 1 273 1.6E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c15130 9178bc07a2a98d3d881d244777ba3bf1 396 Gene3D G3DSA:3.90.1150.10 276 394 3.2E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c15130 9178bc07a2a98d3d881d244777ba3bf1 396 PIRSF PIRSF000390 4 396 6.2E-117 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c15130 9178bc07a2a98d3d881d244777ba3bf1 396 SUPERFAMILY SSF53383 10 394 1.63E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c15130 9178bc07a2a98d3d881d244777ba3bf1 396 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 391 1.9E-128 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 Gene3D G3DSA:3.40.50.720 2 241 1.6E-46 T 12-10-2018 CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 Pfam PF00106 short chain dehydrogenase 7 195 1.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 SUPERFAMILY SSF51735 3 230 3.77E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c35890 33921593a814e9fb4ded66a974c6a94b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c16860 08af2e7947d30c1c07782135574de920 199 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 197 5.0E-64 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 197 29.597 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 87 6.2E-17 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 SUPERFAMILY SSF55174 2 197 9.68E-53 T 12-10-2018 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 Gene3D G3DSA:1.10.1050.10 7 197 1.4E-63 T 12-10-2018 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 ProSitePatterns PS00632 Ribosomal protein S4 signature. 86 110 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 Gene3D G3DSA:3.10.290.10 87 182 1.4E-63 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 Pfam PF01479 S4 domain 89 135 1.4E-16 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 SMART SM00363 88 151 5.8E-15 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c16860 08af2e7947d30c1c07782135574de920 199 SMART SM01390 3 87 1.3E-22 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 426 9.5E-97 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 Pfam PF07690 Major Facilitator Superfamily 13 405 6.4E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 4.7E-5 T 12-10-2018 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 4.7E-5 T 12-10-2018 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 4.7E-5 T 12-10-2018 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 Gene3D G3DSA:1.20.1250.20 261 458 5.7E-18 T 12-10-2018 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 SUPERFAMILY SSF103473 3 453 4.19E-69 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c21570 477012dab3b529cbaa884abf9057a3b1 468 Gene3D G3DSA:1.20.1720.10 10 218 1.1E-52 T 12-10-2018 CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 SUPERFAMILY SSF48557 3 459 4.24E-141 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 Gene3D G3DSA:1.20.200.10 138 405 1.2E-107 T 12-10-2018 CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 3.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 3.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 3.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 Gene3D G3DSA:1.10.275.10 4 137 1.1E-56 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 Gene3D G3DSA:1.10.40.30 406 457 4.9E-20 T 12-10-2018 CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 Pfam PF00206 Lyase 11 340 7.7E-95 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal CLSA_c15280 fb3276498a1856043cc90a52275f9bf1 476 Pfam PF10415 Fumarase C C-terminus 408 458 1.7E-20 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 SMART SM00347 29 129 4.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 Pfam PF13463 Winged helix DNA-binding domain 43 101 2.7E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 Gene3D G3DSA:1.10.10.10 3 141 7.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 SUPERFAMILY SSF46785 14 144 5.83E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c32330 a1bcd1a0c5e135a08175654525ae0d2f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c34510 38a9cafc786c28f50c1af7118708c57e 162 Pfam PF00583 Acetyltransferase (GNAT) family 49 139 8.8E-18 T 12-10-2018 IPR000182 GNAT domain CLSA_c34510 38a9cafc786c28f50c1af7118708c57e 162 SUPERFAMILY SSF55729 39 152 1.66E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c34510 38a9cafc786c28f50c1af7118708c57e 162 Gene3D G3DSA:3.40.630.30 3 159 2.1E-32 T 12-10-2018 CLSA_c21100 405763e66f4426792efd402be100d49e 279 Gene3D G3DSA:1.10.3720.10 64 270 2.7E-26 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c21100 405763e66f4426792efd402be100d49e 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 7.6E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c21100 405763e66f4426792efd402be100d49e 279 SUPERFAMILY SSF161098 69 256 5.23E-30 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 PIRSF PIRSF000379 1 743 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 SUPERFAMILY SSF51998 2 742 1.42E-282 T 12-10-2018 CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 Pfam PF02901 Pyruvate formate lyase-like 16 602 5.7E-209 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 Pfam PF01228 Glycine radical 618 724 1.1E-43 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 Gene3D G3DSA:3.20.70.20 1 743 2.2E-303 T 12-10-2018 CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 ProSitePatterns PS00850 Glycine radical domain signature. 713 721 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLSA_c12540 4ca7e896a46d44d6990fc45a2571cea6 743 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 4 743 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLSA_c12070 4f9760f0b58e35392182a4a2c7cb9c45 434 SUPERFAMILY SSF56601 6 290 3.93E-56 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c12070 4f9760f0b58e35392182a4a2c7cb9c45 434 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 41 269 8.7E-46 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLSA_c12070 4f9760f0b58e35392182a4a2c7cb9c45 434 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 1.8E-11 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c12070 4f9760f0b58e35392182a4a2c7cb9c45 434 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 1.8E-11 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c12070 4f9760f0b58e35392182a4a2c7cb9c45 434 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 1.8E-11 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c12070 4f9760f0b58e35392182a4a2c7cb9c45 434 Gene3D G3DSA:3.40.710.10 22 311 9.4E-77 T 12-10-2018 CLSA_c44930 880548a7d91ee169d7d5acad11dc8027 241 SUPERFAMILY SSF52402 2 213 1.43E-53 T 12-10-2018 CLSA_c44930 880548a7d91ee169d7d5acad11dc8027 241 PIRSF PIRSF004976 1 240 1.5E-67 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CLSA_c44930 880548a7d91ee169d7d5acad11dc8027 241 Gene3D G3DSA:3.40.50.620 1 236 1.8E-54 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c44930 880548a7d91ee169d7d5acad11dc8027 241 Pfam PF01171 PP-loop family 24 202 5.1E-20 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CLSA_c16270 016da9860283f58fd2a8518d0be34a6b 371 Gene3D G3DSA:3.40.50.1820 69 369 5.8E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c16270 016da9860283f58fd2a8518d0be34a6b 371 Pfam PF12146 Serine aminopeptidase, S33 94 351 1.5E-50 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 CLSA_c16270 016da9860283f58fd2a8518d0be34a6b 371 SUPERFAMILY SSF53474 69 366 4.65E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c17210 a4e0a0579822ce6d532f8e9857c6b319 65 Pfam PF12841 YvrJ protein family 9 43 1.2E-14 T 12-10-2018 IPR024419 Protein of unknown function YvrJ CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 Gene3D G3DSA:1.10.10.10 5 79 1.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 Gene3D G3DSA:3.90.1150.10 104 466 1.2E-93 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 SUPERFAMILY SSF46785 9 79 3.09E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 SMART SM00345 19 78 9.7E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 9.6E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 SUPERFAMILY SSF53383 95 466 5.52E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 Pfam PF00155 Aminotransferase class I and II 138 451 7.5E-28 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c11430 3c23b5f632e22cb73be37a702ec28084 476 Gene3D G3DSA:3.40.640.10 141 359 1.2E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c24690 52611274d102e25db03b4de42b05489d 256 Pfam PF01670 Glycosyl hydrolase family 12 45 256 1.0E-19 T 12-10-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 CLSA_c24690 52611274d102e25db03b4de42b05489d 256 Gene3D G3DSA:2.60.120.180 21 255 1.4E-46 T 12-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c24690 52611274d102e25db03b4de42b05489d 256 SUPERFAMILY SSF49899 31 255 2.17E-40 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c12510 22c0778cf30ff703d24e6b247bbdcc7e 240 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 27 206 4.3E-46 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c12510 22c0778cf30ff703d24e6b247bbdcc7e 240 Pfam PF00156 Phosphoribosyl transferase domain 55 168 7.7E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c12510 22c0778cf30ff703d24e6b247bbdcc7e 240 SUPERFAMILY SSF53271 18 213 1.33E-38 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c12510 22c0778cf30ff703d24e6b247bbdcc7e 240 Gene3D G3DSA:3.40.50.2020 1 216 1.1E-62 T 12-10-2018 CLSA_c12510 22c0778cf30ff703d24e6b247bbdcc7e 240 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 240 28.157 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 SUPERFAMILY SSF52374 5 333 4.16E-83 T 12-10-2018 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 334 35.316 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 Pfam PF00579 tRNA synthetases class I (W and Y) 5 288 9.3E-60 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 Gene3D G3DSA:3.40.50.620 6 328 7.8E-114 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 333 6.3E-81 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 Gene3D G3DSA:1.10.240.10 185 301 7.8E-114 T 12-10-2018 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.1E-24 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 200 210 1.1E-24 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 1.1E-24 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLSA_c39050 a122d04bf8cba8166b5e5d2ab8adfc87 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.1E-24 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLSA_c00980 6d02629644e7c79c47f00762ceaa15fe 424 Pfam PF03313 Serine dehydratase alpha chain 89 419 1.9E-60 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit CLSA_c00980 6d02629644e7c79c47f00762ceaa15fe 424 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 7 424 33.459 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 CLSA_c00980 6d02629644e7c79c47f00762ceaa15fe 424 PIRSF PIRSF006054 5 424 8.8E-137 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 CLSA_c15360 8e099db575f01713092a9c83343c11d4 451 Hamap MF_01221 UPF0210 protein . 1 451 52.951 T 12-10-2018 IPR007841 Uncharacterised protein family UPF0210 CLSA_c15360 8e099db575f01713092a9c83343c11d4 451 SUPERFAMILY SSF51998 1 446 1.65E-179 T 12-10-2018 CLSA_c15360 8e099db575f01713092a9c83343c11d4 451 Gene3D G3DSA:3.20.70.20 1 451 2.5E-185 T 12-10-2018 CLSA_c15360 8e099db575f01713092a9c83343c11d4 451 Pfam PF05167 Uncharacterised ACR (DUF711) 12 415 3.5E-181 T 12-10-2018 IPR007841 Uncharacterised protein family UPF0210 CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Pfam PF01473 Putative cell wall binding repeat 108 126 1.1E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Pfam PF01473 Putative cell wall binding repeat 88 106 1.1E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Pfam PF01473 Putative cell wall binding repeat 148 166 9.0E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Pfam PF01473 Putative cell wall binding repeat 128 146 8.7E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Pfam PF01473 Putative cell wall binding repeat 48 66 1.6E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Pfam PF01473 Putative cell wall binding repeat 68 86 3.1E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Gene3D G3DSA:2.10.270.10 145 222 4.5E-17 T 12-10-2018 CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 Gene3D G3DSA:2.10.270.10 13 144 8.1E-37 T 12-10-2018 CLSA_c42120 0477ec0f5fcf764bc3bf42d2ac451888 360 SUPERFAMILY SSF69360 36 207 5.1E-57 T 12-10-2018 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 Gene3D G3DSA:3.90.1150.10 9 379 1.5E-136 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 Gene3D G3DSA:3.40.640.10 55 302 1.5E-136 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 389 2.2E-139 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 392 65.588 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 PIRSF PIRSF000521 18 162 9.7E-10 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 PIRSF PIRSF000521 157 392 1.6E-30 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 SUPERFAMILY SSF53383 13 391 1.29E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c07150 c1db29b9ac9dc635e3766a388dd47a5c 394 Pfam PF00202 Aminotransferase class-III 22 388 1.9E-109 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c16370 6b0efab14f5315e876e10d4f971dfc6c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c16370 6b0efab14f5315e876e10d4f971dfc6c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c16370 6b0efab14f5315e876e10d4f971dfc6c 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 5.9E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c16370 6b0efab14f5315e876e10d4f971dfc6c 194 SUPERFAMILY SSF46689 8 69 2.13E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c16370 6b0efab14f5315e876e10d4f971dfc6c 194 Gene3D G3DSA:1.10.357.10 6 194 1.1E-27 T 12-10-2018 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 Pfam PF02810 SEC-C motif 5 22 7.0E-10 T 12-10-2018 IPR004027 SEC-C motif CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 Gene3D G3DSA:3.90.230.10 41 289 8.9E-100 T 12-10-2018 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 SUPERFAMILY SSF55920 43 287 1.96E-82 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 44 288 1.1E-90 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 Pfam PF00557 Metallopeptidase family M24 51 281 4.4E-51 T 12-10-2018 IPR000994 Peptidase M24 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 Hamap MF_01974 Methionine aminopeptidase [map]. 42 289 37.951 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 SUPERFAMILY SSF103642 4 24 1.8E-7 T 12-10-2018 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 107 120 6.3E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 130 146 6.3E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 200 212 6.3E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c17640 ec419af9040e80babad2ba953b0372bb 289 PRINTS PR00599 Methionine aminopeptidase-1 signature 231 243 6.3E-21 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CLSA_c09040 b311393a578f1e68f24ef3945588a1a5 197 Pfam PF02384 N-6 DNA Methylase 5 151 6.1E-32 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLSA_c09040 b311393a578f1e68f24ef3945588a1a5 197 Gene3D G3DSA:3.40.50.150 1 149 7.5E-32 T 12-10-2018 CLSA_c09040 b311393a578f1e68f24ef3945588a1a5 197 SUPERFAMILY SSF53335 3 191 3.32E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 SUPERFAMILY SSF51445 299 485 4.77E-46 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Gene3D G3DSA:2.10.270.10 50 129 6.1E-15 T 12-10-2018 CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Gene3D G3DSA:3.20.20.80 282 488 1.1E-56 T 12-10-2018 CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01183 Glycosyl hydrolases family 25 301 474 1.8E-40 T 12-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 SMART SM00641 298 403 1.2E-10 T 12-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 80 94 0.33 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 140 157 0.047 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 220 237 0.0084 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 239 252 0.059 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 99 117 0.0014 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 119 137 1.2E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 199 217 6.5E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Pfam PF01473 Putative cell wall binding repeat 179 197 3.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Gene3D G3DSA:2.10.270.10 201 277 3.9E-23 T 12-10-2018 CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 SUPERFAMILY SSF69360 71 275 5.57E-64 T 12-10-2018 CLSA_c22060 67e7a4e0aabec8ce95aa2adb1218b91a 489 Gene3D G3DSA:2.10.270.10 130 200 3.9E-23 T 12-10-2018 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 288 306 1.5E-45 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 145 162 1.5E-45 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 331 347 1.5E-45 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 108 128 1.5E-45 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 74 90 1.5E-45 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 420 435 1.5E-45 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 Gene3D G3DSA:2.30.250.10 85 244 1.7E-159 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 SUPERFAMILY SSF53187 3 453 2.46E-98 T 12-10-2018 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 10 453 4.3E-137 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 SUPERFAMILY SSF101821 86 239 3.48E-34 T 12-10-2018 CLSA_c42560 e16d8cb41e42e454c1dc04880335d72f 454 Gene3D G3DSA:3.40.630.10 6 453 1.7E-159 T 12-10-2018 CLSA_c39480 e703ddf099614f6f3706633f509d2404 338 Gene3D G3DSA:3.90.25.30 169 329 4.4E-126 T 12-10-2018 CLSA_c39480 e703ddf099614f6f3706633f509d2404 338 Pfam PF02719 Polysaccharide biosynthesis protein 9 291 4.9E-102 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLSA_c39480 e703ddf099614f6f3706633f509d2404 338 Gene3D G3DSA:3.40.50.720 7 316 4.4E-126 T 12-10-2018 CLSA_c39480 e703ddf099614f6f3706633f509d2404 338 SUPERFAMILY SSF51735 1 257 1.37E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c36490 dfb8d155ede5b98af68c6d3132a652d1 145 Pfam PF14567 SMI1-KNR4 cell-wall 6 138 2.3E-39 T 12-10-2018 CLSA_c36490 dfb8d155ede5b98af68c6d3132a652d1 145 Gene3D G3DSA:3.40.1580.10 3 145 4.1E-36 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily CLSA_c36490 dfb8d155ede5b98af68c6d3132a652d1 145 SUPERFAMILY SSF160631 1 144 8.63E-32 T 12-10-2018 CLSA_c36490 dfb8d155ede5b98af68c6d3132a652d1 145 SMART SM00860 22 135 1.2E-5 T 12-10-2018 IPR018958 Knr4/Smi1-like domain CLSA_c12420 f8cba204040aedbb7e3043c84af77bff 284 Pfam PF02673 Bacitracin resistance protein BacA 11 272 2.8E-76 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLSA_c12420 f8cba204040aedbb7e3043c84af77bff 284 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 6 277 16.858 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLSA_c12420 f8cba204040aedbb7e3043c84af77bff 284 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 11 267 2.2E-69 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLSA_c26700 90777229d440d72a3f41748376d7eed7 312 SUPERFAMILY SSF53098 28 268 1.14E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c26700 90777229d440d72a3f41748376d7eed7 312 Pfam PF01609 Transposase DDE domain 49 258 4.7E-30 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c23560 b717fe220fde452071fbe3cb652f2775 258 Pfam PF00290 Tryptophan synthase alpha chain 8 253 1.8E-81 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c23560 b717fe220fde452071fbe3cb652f2775 258 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 256 32.294 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c23560 b717fe220fde452071fbe3cb652f2775 258 Gene3D G3DSA:3.20.20.70 1 258 9.4E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c23560 b717fe220fde452071fbe3cb652f2775 258 SUPERFAMILY SSF51366 1 251 2.64E-77 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c23560 b717fe220fde452071fbe3cb652f2775 258 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 255 3.6E-77 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c41020 5bbc2737250d07cec1efa692dfb59e5d 224 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 10 220 4.3E-73 T 12-10-2018 IPR018708 Protein of unknown function DUF2225 CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 Gene3D G3DSA:1.10.10.10 713 779 2.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 Pfam PF01580 FtsK/SpoIIIE family 562 613 6.2E-15 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 Pfam PF01580 FtsK/SpoIIIE family 422 558 8.1E-47 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 SUPERFAMILY SSF52540 395 684 2.76E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 Pfam PF09397 Ftsk gamma domain 720 781 6.0E-28 T 12-10-2018 IPR018541 FtsK gamma domain CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 SUPERFAMILY SSF46785 718 784 1.17E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 Gene3D G3DSA:3.30.980.40 313 418 9.4E-37 T 12-10-2018 CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 Gene3D G3DSA:3.40.50.300 419 700 1.2E-109 T 12-10-2018 CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 SUPERFAMILY SSF103473 27 176 3.4E-5 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c14520 7aa93544a654dd6dabf486676e353d34 795 SMART SM00843 718 783 1.1E-35 T 12-10-2018 IPR018541 FtsK gamma domain CLSA_c12130 c980342e64700224664c6b26cbdf8d7f 262 PIRSF PIRSF036628 1 257 1.4E-71 T 12-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CLSA_c12130 c980342e64700224664c6b26cbdf8d7f 262 Gene3D G3DSA:2.60.120.10 119 257 1.6E-42 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c12130 c980342e64700224664c6b26cbdf8d7f 262 SUPERFAMILY SSF51182 15 239 4.58E-39 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c12130 c980342e64700224664c6b26cbdf8d7f 262 Pfam PF04962 KduI/IolB family 8 251 1.0E-59 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLSA_c12130 c980342e64700224664c6b26cbdf8d7f 262 Gene3D G3DSA:2.60.120.10 15 118 1.8E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c20750 f1abac13a765ed627569afabdf2de0bd 216 Pfam PF02525 Flavodoxin-like fold 2 208 2.1E-29 T 12-10-2018 IPR003680 Flavodoxin-like fold CLSA_c20750 f1abac13a765ed627569afabdf2de0bd 216 Gene3D G3DSA:3.40.50.360 1 212 3.5E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c20750 f1abac13a765ed627569afabdf2de0bd 216 SUPERFAMILY SSF52218 1 212 6.74E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c20750 f1abac13a765ed627569afabdf2de0bd 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 210 19.322 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CLSA_c30930 96f2c076c1b2ea0e09fd57f86d04008c 280 SUPERFAMILY SSF56752 1 274 4.06E-67 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CLSA_c30930 96f2c076c1b2ea0e09fd57f86d04008c 280 Pfam PF01063 Amino-transferase class IV 31 244 2.5E-41 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CLSA_c30930 96f2c076c1b2ea0e09fd57f86d04008c 280 Gene3D G3DSA:3.30.470.10 1 117 9.0E-29 T 12-10-2018 CLSA_c30930 96f2c076c1b2ea0e09fd57f86d04008c 280 Gene3D G3DSA:3.20.10.10 118 278 5.1E-42 T 12-10-2018 CLSA_c17100 ac47836362d021a2e66a87b80b67f4ce 320 Gene3D G3DSA:3.40.50.720 1 179 5.9E-20 T 12-10-2018 CLSA_c17100 ac47836362d021a2e66a87b80b67f4ce 320 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 156 3.6E-14 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain CLSA_c17100 ac47836362d021a2e66a87b80b67f4ce 320 SUPERFAMILY SSF51735 1 110 4.68E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c38790 314d9497565ce9df2d76c561d0ec83dd 381 Pfam PF01212 Beta-eliminating lyase 98 328 5.4E-26 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CLSA_c38790 314d9497565ce9df2d76c561d0ec83dd 381 Gene3D G3DSA:3.90.1150.10 47 371 6.0E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c38790 314d9497565ce9df2d76c561d0ec83dd 381 Gene3D G3DSA:3.40.640.10 54 291 6.0E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c38790 314d9497565ce9df2d76c561d0ec83dd 381 SUPERFAMILY SSF53383 42 380 1.53E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c42100 bd8fe5bd653cb475cc1f38be6c05c9eb 614 Pfam PF04932 O-Antigen ligase 242 534 1.3E-38 T 12-10-2018 IPR007016 O-antigen ligase-related CLSA_c07380 d1f29e60de6dc0a53eb3e514dd3065e6 209 SUPERFAMILY SSF51391 6 205 1.57E-63 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07380 d1f29e60de6dc0a53eb3e514dd3065e6 209 Pfam PF02581 Thiamine monophosphate synthase 9 189 4.7E-64 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07380 d1f29e60de6dc0a53eb3e514dd3065e6 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 202 1.9E-65 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07380 d1f29e60de6dc0a53eb3e514dd3065e6 209 Gene3D G3DSA:3.20.20.70 1 209 1.1E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c07380 d1f29e60de6dc0a53eb3e514dd3065e6 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 6 207 27.747 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c13880 20d1cf4bec958848b5fe0dabec05dd43 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 18.512 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13880 20d1cf4bec958848b5fe0dabec05dd43 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 4 56 7.3E-25 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13880 20d1cf4bec958848b5fe0dabec05dd43 60 Pfam PF01783 Ribosomal L32p protein family 3 57 1.7E-23 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13880 20d1cf4bec958848b5fe0dabec05dd43 60 SUPERFAMILY SSF57829 1 56 1.4E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CLSA_c14490 a43713859a735801955f40c59bce9c94 93 SUPERFAMILY SSF50346 9 82 1.18E-8 T 12-10-2018 IPR011033 PRC-barrel-like superfamily CLSA_c14490 a43713859a735801955f40c59bce9c94 93 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 10 82 5.5E-23 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH CLSA_c14490 a43713859a735801955f40c59bce9c94 93 Pfam PF05239 PRC-barrel domain 8 86 4.1E-10 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 PIRSF PIRSF000441 1 193 3.1E-81 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 Gene3D G3DSA:2.160.10.10 67 192 3.1E-36 T 12-10-2018 CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 SUPERFAMILY SSF51161 3 168 5.41E-54 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 7.2E-6 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 5.6E-8 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 4.1E-75 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CLSA_c40540 2c0985f260b9c6b11c8121cc74110c41 196 Gene3D G3DSA:1.10.3130.10 1 66 3.0E-21 T 12-10-2018 CLSA_c18420 78250b52373fb1a60b6ce3531ad415b1 254 Pfam PF02517 CAAX protease self-immunity 125 214 3.0E-16 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 Gene3D G3DSA:3.40.50.300 102 291 2.1E-114 T 12-10-2018 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 SMART SM00382 101 259 3.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c13940 7cb151650935185e73c35b469b95c231 302 Gene3D G3DSA:1.20.120.140 6 301 2.1E-114 T 12-10-2018 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 SUPERFAMILY SSF47364 4 83 1.31E-21 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 33 302 60.531 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 SMART SM00962 102 300 1.6E-110 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 Pfam PF02881 SRP54-type protein, helical bundle domain 20 83 2.5E-14 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 SUPERFAMILY SSF52540 101 301 3.86E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13940 7cb151650935185e73c35b469b95c231 302 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 34 301 1.6E-109 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 276 289 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 Pfam PF00448 SRP54-type protein, GTPase domain 103 301 1.4E-78 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c13940 7cb151650935185e73c35b469b95c231 302 SMART SM00963 9 90 1.9E-21 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLSA_c34210 cc945eef6475e664e44857f06f134d0c 213 PIRSF PIRSF020606 1 202 4.3E-78 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 CLSA_c34210 cc945eef6475e664e44857f06f134d0c 213 Pfam PF09997 Predicted membrane protein (DUF2238) 40 180 5.3E-57 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 CLSA_c26300 d20a683508d77a34adb4af15c3648daf 425 Gene3D G3DSA:3.50.50.60 198 396 1.0E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c26300 d20a683508d77a34adb4af15c3648daf 425 Pfam PF01134 Glucose inhibited division protein A 260 350 8.1E-17 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLSA_c26300 d20a683508d77a34adb4af15c3648daf 425 Pfam PF01134 Glucose inhibited division protein A 2 221 1.0E-30 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLSA_c26300 d20a683508d77a34adb4af15c3648daf 425 SUPERFAMILY SSF51905 2 346 1.28E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c26300 d20a683508d77a34adb4af15c3648daf 425 Gene3D G3DSA:3.50.50.60 1 165 7.9E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c03610 8f860e0fdb538be5ef54f46d14d8c566 388 SUPERFAMILY SSF56796 2 384 2.22E-127 T 12-10-2018 CLSA_c03610 8f860e0fdb538be5ef54f46d14d8c566 388 Gene3D G3DSA:1.20.1090.10 184 384 1.5E-68 T 12-10-2018 CLSA_c03610 8f860e0fdb538be5ef54f46d14d8c566 388 Gene3D G3DSA:3.40.50.1970 1 182 2.6E-53 T 12-10-2018 CLSA_c03610 8f860e0fdb538be5ef54f46d14d8c566 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c03610 8f860e0fdb538be5ef54f46d14d8c566 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 373 3.2E-119 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c03610 8f860e0fdb538be5ef54f46d14d8c566 388 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 256 276 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c27230 cfd76ea49b5d1246ea5e7537c3eda218 157 Pfam PF04472 Cell division protein SepF 68 139 4.5E-24 T 12-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 CLSA_c27230 cfd76ea49b5d1246ea5e7537c3eda218 157 Hamap MF_01197 Cell division protein SepF [sepF]. 8 147 18.377 T 12-10-2018 IPR023052 Cell division protein SepF GO:0090529 CLSA_c27230 cfd76ea49b5d1246ea5e7537c3eda218 157 Gene3D G3DSA:3.30.110.150 62 155 6.7E-28 T 12-10-2018 IPR038594 SepF-like superfamily CLSA_c41540 18e23a8b243b10e9f736c7b7af06b258 250 Gene3D G3DSA:3.40.50.10490 83 249 3.5E-23 T 12-10-2018 CLSA_c41540 18e23a8b243b10e9f736c7b7af06b258 250 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.2E-23 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c41540 18e23a8b243b10e9f736c7b7af06b258 250 SUPERFAMILY SSF53697 88 247 2.89E-20 T 12-10-2018 CLSA_c41540 18e23a8b243b10e9f736c7b7af06b258 250 Pfam PF01380 SIS domain 111 216 2.8E-13 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c41540 18e23a8b243b10e9f736c7b7af06b258 250 SUPERFAMILY SSF46689 1 77 2.69E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c41540 18e23a8b243b10e9f736c7b7af06b258 250 Gene3D G3DSA:1.10.10.10 2 76 2.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 SUPERFAMILY SSF53383 3 376 4.34E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 4 383 1.1E-190 T 12-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 ProSitePatterns PS00018 EF-hand calcium-binding domain. 121 133 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 Pfam PF00266 Aminotransferase class-V 4 366 1.5E-85 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 392 53.002 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 PIRSF PIRSF005572 1 381 1.2E-131 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 Gene3D G3DSA:3.40.640.10 15 256 1.3E-156 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c13220 f6d29ff1544bff1792a3779524c0697b 393 Gene3D G3DSA:3.90.1150.10 4 373 1.3E-156 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 SUPERFAMILY SSF51306 31 174 2.93E-38 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 ProSitePatterns PS00760 Signal peptidases I lysine active site. 83 95 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 Pfam PF00717 Peptidase S24-like 37 104 2.6E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 81 93 3.1E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 31 47 3.1E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 126 145 3.1E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 14 168 7.2E-41 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 Gene3D G3DSA:2.10.109.10 40 166 5.6E-30 T 12-10-2018 CLSA_c42700 1dc35766e8a394d63ab4ada64c7fa804 175 ProSitePatterns PS00501 Signal peptidases I serine active site. 40 47 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CLSA_c15780 eaa399f7e31f9b4236c9eb2fab28e8b2 269 Pfam PF14572 Phosphoribosyl synthetase-associated domain 191 268 7.7E-7 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLSA_c15780 eaa399f7e31f9b4236c9eb2fab28e8b2 269 SUPERFAMILY SSF53271 8 130 4.76E-8 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c15780 eaa399f7e31f9b4236c9eb2fab28e8b2 269 SUPERFAMILY SSF53271 145 260 3.02E-13 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c15780 eaa399f7e31f9b4236c9eb2fab28e8b2 269 Gene3D G3DSA:3.40.50.2020 3 127 4.4E-12 T 12-10-2018 CLSA_c15780 eaa399f7e31f9b4236c9eb2fab28e8b2 269 Gene3D G3DSA:3.40.50.2020 128 268 8.9E-22 T 12-10-2018 CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 5 205 7.0E-60 T 12-10-2018 IPR019870 Selenium metabolism protein YedF CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 Gene3D G3DSA:3.30.110.40 4 83 7.5E-20 T 12-10-2018 IPR036868 TusA-like domain superfamily CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 Gene3D G3DSA:3.40.1260.10 111 204 2.7E-8 T 12-10-2018 IPR027396 DsrEFH-like CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 SUPERFAMILY SSF75169 105 204 1.05E-14 T 12-10-2018 IPR027396 DsrEFH-like CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 Pfam PF01206 Sulfurtransferase TusA 5 66 6.6E-11 T 12-10-2018 IPR001455 TusA-like domain CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 Pfam PF02635 DsrE/DsrF-like family 129 204 6.7E-10 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 12-10-2018 IPR001455 TusA-like domain CLSA_c18300 46973d3aa845aa75aff8e883ff9c67ad 205 SUPERFAMILY SSF64307 3 65 7.98E-10 T 12-10-2018 IPR036868 TusA-like domain superfamily CLSA_c43120 f812a2fcbf9af8c71a0058e1f352dba8 273 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c43120 f812a2fcbf9af8c71a0058e1f352dba8 273 SUPERFAMILY SSF52518 2 269 2.0E-94 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c43120 f812a2fcbf9af8c71a0058e1f352dba8 273 Gene3D G3DSA:3.40.50.970 1 273 3.2E-116 T 12-10-2018 CLSA_c43120 f812a2fcbf9af8c71a0058e1f352dba8 273 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 270 4.7E-62 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 2.0E-58 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 Hamap MF_00494 Probable transaldolase [tal]. 1 214 46.94 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 Gene3D G3DSA:3.20.20.70 1 217 1.9E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 SUPERFAMILY SSF51569 1 213 3.45E-78 T 12-10-2018 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CLSA_c32980 f79b3d14bb47c30e1e74ae8f58d44798 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 2.2E-96 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLSA_c19620 986e672153819e0d06ab11b33408fb0f 353 Gene3D G3DSA:2.60.40.1630 76 222 2.6E-13 T 12-10-2018 CLSA_c19620 986e672153819e0d06ab11b33408fb0f 353 Pfam PF13786 Domain of unknown function (DUF4179) 45 133 5.2E-17 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 Pfam PF00072 Response regulator receiver domain 5 115 3.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 SMART SM00448 2 115 1.8E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 Gene3D G3DSA:3.40.50.2300 3 149 1.8E-26 T 12-10-2018 CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 SUPERFAMILY SSF52172 1 130 2.28E-30 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 SUPERFAMILY SSF46785 173 230 2.1E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 Pfam PF08220 DeoR-like helix-turn-helix domain 177 213 8.2E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c32180 9982ae734ede3f5008c727399cb75ae8 230 PIRSF PIRSF006171 1 230 3.3E-76 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 SMART SM00902 517 574 1.5E-12 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 SUPERFAMILY SSF54292 1 122 7.26E-33 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 139 511 6.2E-161 T 12-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Gene3D G3DSA:3.30.70.20 142 205 3.3E-150 T 12-10-2018 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 6.1E-19 T 12-10-2018 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 223 507 1.4E-94 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Gene3D G3DSA:3.10.20.740 1 124 8.6E-37 T 12-10-2018 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Gene3D G3DSA:3.40.50.1780 206 510 3.3E-150 T 12-10-2018 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Gene3D G3DSA:3.40.950.10 272 501 3.3E-150 T 12-10-2018 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Pfam PF12837 4Fe-4S binding domain 140 159 5.9E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Pfam PF12837 4Fe-4S binding domain 185 205 2.3E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Pfam PF02256 Iron hydrogenase small subunit 521 573 3.3E-17 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 SUPERFAMILY SSF54862 138 222 1.67E-15 T 12-10-2018 CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 SUPERFAMILY SSF53920 189 573 7.72E-134 T 12-10-2018 IPR009016 Iron hydrogenase CLSA_c00340 043fe0faf127d60cf15d649083f70010 574 Gene3D G3DSA:4.10.260.20 516 574 7.7E-12 T 12-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 SUPERFAMILY SSF53671 3 305 3.8E-105 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 306 78.988 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 Gene3D G3DSA:3.40.50.1370 133 301 8.8E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 149 303 5.9E-56 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 2.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 2.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 2.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 305 1.0E-131 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 Gene3D G3DSA:3.40.50.1370 3 132 8.8E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 143 1.7E-53 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 2.6E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 2.6E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 284 295 2.6E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 2.6E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c07140 c4df93cd7d741492a10e0ecb91c754b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 2.6E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 229 4.4E-45 T 12-10-2018 CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 SUPERFAMILY SSF51735 2 230 5.79E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 5.5E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 5.5E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 5.5E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 Gene3D G3DSA:3.40.50.720 1 231 2.0E-61 T 12-10-2018 CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 3.3E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 3.3E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 3.3E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 3.3E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c34240 53b36143e23629219a9bfc6c4bea5dce 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 3.3E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c30550 a552d6e0358258ceb9bd7318d427e217 220 Pfam PF01661 Macro domain 20 178 7.2E-34 T 12-10-2018 IPR002589 Macro domain CLSA_c30550 a552d6e0358258ceb9bd7318d427e217 220 SMART SM00506 3 178 3.4E-34 T 12-10-2018 IPR002589 Macro domain CLSA_c30550 a552d6e0358258ceb9bd7318d427e217 220 SUPERFAMILY SSF52949 4 217 1.57E-50 T 12-10-2018 CLSA_c19270 9307ee9a092f8545000ee10d7f670827 527 SUPERFAMILY SSF55874 13 147 1.67E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c19270 9307ee9a092f8545000ee10d7f670827 527 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 140 5.3E-14 T 12-10-2018 CLSA_c19270 9307ee9a092f8545000ee10d7f670827 527 Gene3D G3DSA:3.30.565.10 8 207 7.4E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c27090 9b4117f2bee5e9411ebaa6202c64fb22 436 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 267 281 - T 12-10-2018 IPR001482 Type II/IV secretion system protein CLSA_c27090 9b4117f2bee5e9411ebaa6202c64fb22 436 SUPERFAMILY SSF52540 68 423 2.67E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c27090 9b4117f2bee5e9411ebaa6202c64fb22 436 Gene3D G3DSA:3.40.50.300 174 429 2.1E-81 T 12-10-2018 CLSA_c27090 9b4117f2bee5e9411ebaa6202c64fb22 436 Pfam PF00437 Type II/IV secretion system protein 75 338 3.4E-70 T 12-10-2018 IPR001482 Type II/IV secretion system protein CLSA_c27090 9b4117f2bee5e9411ebaa6202c64fb22 436 Gene3D G3DSA:3.30.450.90 41 171 7.5E-36 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 453 42.87 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 453 2.5E-193 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 Gene3D G3DSA:1.10.40.30 360 432 1.0E-189 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 Gene3D G3DSA:1.10.275.10 25 229 1.0E-189 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 ProSitePatterns PS00163 Fumarate lyases signature. 275 284 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 3.0E-30 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 3.0E-30 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 3.0E-30 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 3.0E-30 T 12-10-2018 IPR000362 Fumarate lyase family CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 Gene3D G3DSA:1.20.200.10 119 448 1.0E-189 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 Pfam PF00206 Lyase 6 300 5.0E-78 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00145 Argininosuccinate lyase family signature 310 329 9.6E-64 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 9.6E-64 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00145 Argininosuccinate lyase family signature 275 291 9.6E-64 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 9.6E-64 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 9.6E-64 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 PRINTS PR00145 Argininosuccinate lyase family signature 193 209 9.6E-64 T 12-10-2018 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 Pfam PF14698 Argininosuccinate lyase C-terminal 363 431 2.1E-24 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07190 dcc5f7ffdb37bc96337102a4f1943ad3 462 SUPERFAMILY SSF48557 3 455 1.05E-146 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 CLSA_c43090 846caba9316ac75006d6d5f99b28e512 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.8E-86 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CLSA_c43090 846caba9316ac75006d6d5f99b28e512 228 SUPERFAMILY SSF52540 1 220 4.48E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43090 846caba9316ac75006d6d5f99b28e512 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c43090 846caba9316ac75006d6d5f99b28e512 228 Pfam PF00005 ABC transporter 18 165 3.9E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c43090 846caba9316ac75006d6d5f99b28e512 228 SMART SM00382 27 214 2.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c43090 846caba9316ac75006d6d5f99b28e512 228 Gene3D G3DSA:3.40.50.300 1 227 6.2E-69 T 12-10-2018 CLSA_c41060 c74d993895fa3eeb4dcdb99381f390f2 308 SUPERFAMILY SSF53613 1 285 3.12E-67 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c41060 c74d993895fa3eeb4dcdb99381f390f2 308 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 305 2.8E-97 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLSA_c41060 c74d993895fa3eeb4dcdb99381f390f2 308 Pfam PF00294 pfkB family carbohydrate kinase 18 288 1.4E-52 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB CLSA_c41060 c74d993895fa3eeb4dcdb99381f390f2 308 Gene3D G3DSA:3.40.1190.20 1 308 2.4E-100 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c41060 c74d993895fa3eeb4dcdb99381f390f2 308 PIRSF PIRSF000535 1 308 6.0E-92 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLSA_c41060 c74d993895fa3eeb4dcdb99381f390f2 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 SMART SM00849 33 222 1.3E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 SUPERFAMILY SSF52218 248 386 9.35E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 Pfam PF00753 Metallo-beta-lactamase superfamily 34 167 9.1E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 PIRSF PIRSF005243 1 387 3.3E-150 T 12-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 SUPERFAMILY SSF56281 9 279 2.88E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 Gene3D G3DSA:3.60.15.10 1 242 1.3E-103 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 Pfam PF00258 Flavodoxin 251 378 7.2E-11 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c05880 d784ad0e06abd479e1c0decd36aabf7a 387 Gene3D G3DSA:3.40.50.360 245 386 1.4E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c07280 58cebae38cc6201186af191403cfccae 511 SMART SM00387 394 511 1.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c07280 58cebae38cc6201186af191403cfccae 511 SMART SM00304 224 277 4.5E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 SMART SM00388 285 352 5.3E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 SUPERFAMILY SSF47384 268 352 7.85E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 Gene3D G3DSA:1.10.287.130 281 352 3.2E-22 T 12-10-2018 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 SUPERFAMILY SSF158472 226 274 6.54E-7 T 12-10-2018 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 509 5.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c07280 58cebae38cc6201186af191403cfccae 511 Gene3D G3DSA:1.20.1480.50 190 280 9.0E-7 T 12-10-2018 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 1.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 1.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 1.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 1.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 351 8.0E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c07280 58cebae38cc6201186af191403cfccae 511 Gene3D G3DSA:3.30.565.10 357 511 2.6E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c07280 58cebae38cc6201186af191403cfccae 511 SUPERFAMILY SSF55874 341 509 3.8E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 SUPERFAMILY SSF50249 543 642 1.22E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 227 238 1.2E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 260 275 1.2E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 91 102 1.2E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 11 24 1.2E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 43 57 1.2E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 1.2E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Gene3D G3DSA:3.40.50.620 9 337 5.4E-153 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Pfam PF09334 tRNA synthetases class I (M) 9 364 5.5E-116 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 SUPERFAMILY SSF47323 354 557 4.25E-42 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 511 4.8E-175 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Pfam PF01588 Putative tRNA binding domain 550 637 2.4E-27 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Hamap MF_01228 Methionine--tRNA ligase [metG]. 5 511 50.51 T 12-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Gene3D G3DSA:2.170.220.10 120 229 5.4E-153 T 12-10-2018 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Gene3D G3DSA:2.40.50.140 534 644 9.6E-35 T 12-10-2018 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 SUPERFAMILY SSF52374 6 351 2.79E-118 T 12-10-2018 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 520 637 2.9E-42 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLSA_c00720 d3609ae7b64f4fc87b951cda0f3b6baa 645 Gene3D G3DSA:1.10.730.10 341 513 6.8E-48 T 12-10-2018 CLSA_c09090 20ca76d71ce83aeb39107bac4a848169 613 SUPERFAMILY SSF52540 21 538 2.37E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09090 20ca76d71ce83aeb39107bac4a848169 613 SUPERFAMILY SSF75712 274 369 1.44E-5 T 12-10-2018 CLSA_c09090 20ca76d71ce83aeb39107bac4a848169 613 Gene3D G3DSA:3.40.50.300 323 597 3.5E-7 T 12-10-2018 CLSA_c09090 20ca76d71ce83aeb39107bac4a848169 613 Pfam PF13476 AAA domain 21 293 2.2E-11 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 Gene3D G3DSA:2.10.270.10 507 584 7.9E-26 T 12-10-2018 CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 Pfam PF01473 Putative cell wall binding repeat 527 545 2.4E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 Pfam PF01473 Putative cell wall binding repeat 507 525 6.2E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 Pfam PF01473 Putative cell wall binding repeat 547 566 8.6E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 Pfam PF01473 Putative cell wall binding repeat 486 504 8.9E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 SUPERFAMILY SSF69360 459 583 1.86E-34 T 12-10-2018 CLSA_c41970 a35dc24fa418bfe36d01901a94fa6877 584 Gene3D G3DSA:2.20.120.10 464 506 2.6E-7 T 12-10-2018 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 Pfam PF00672 HAMP domain 188 238 1.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 460 6.4E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 SUPERFAMILY SSF55874 299 460 1.31E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 SMART SM00304 188 241 8.0E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 SMART SM00388 242 309 1.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 SMART SM00387 352 464 2.2E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 Gene3D G3DSA:3.30.565.10 315 467 7.7E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 SUPERFAMILY SSF47384 225 309 7.46E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 SUPERFAMILY SSF158472 189 238 3.79E-8 T 12-10-2018 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 9.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 9.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 9.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 9.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 Gene3D G3DSA:1.10.287.130 192 309 8.3E-32 T 12-10-2018 CLSA_c28910 e152e8cc1c078799bbb7ca6203726e90 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 309 3.4E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c10180 167348438dde00be838efccd4925e585 260 Pfam PF01618 MotA/TolQ/ExbB proton channel family 104 219 7.3E-26 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CLSA_c10180 167348438dde00be838efccd4925e585 260 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 Gene3D G3DSA:3.30.428.10 1 114 8.4E-42 T 12-10-2018 IPR036265 HIT-like superfamily CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 PRINTS PR00332 Histidine triad family signature 5 21 9.3E-20 T 12-10-2018 IPR001310 Histidine triad (HIT) protein CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 PRINTS PR00332 Histidine triad family signature 94 104 9.3E-20 T 12-10-2018 IPR001310 Histidine triad (HIT) protein CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 PRINTS PR00332 Histidine triad family signature 26 44 9.3E-20 T 12-10-2018 IPR001310 Histidine triad (HIT) protein CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 Pfam PF01230 HIT domain 12 108 9.8E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 12-10-2018 IPR019808 Histidine triad, conserved site CLSA_c10920 b604c37d8138a617b7d2f85fe9d99e1f 114 SUPERFAMILY SSF54197 1 113 1.04E-38 T 12-10-2018 IPR036265 HIT-like superfamily CLSA_c02020 6b72d6a85838e0ca4c68443c776da6b4 206 SUPERFAMILY SSF52166 1 205 4.84E-80 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02020 6b72d6a85838e0ca4c68443c776da6b4 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 206 35.831 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02020 6b72d6a85838e0ca4c68443c776da6b4 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 1.6E-71 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CLSA_c02020 6b72d6a85838e0ca4c68443c776da6b4 206 Gene3D G3DSA:3.40.1370.10 3 206 4.7E-81 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02020 6b72d6a85838e0ca4c68443c776da6b4 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 9.5E-81 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c24560 5dcee926029ceb341dd1e5e1e1d59e6b 247 Gene3D G3DSA:3.20.20.140 1 246 5.9E-57 T 12-10-2018 CLSA_c24560 5dcee926029ceb341dd1e5e1e1d59e6b 247 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CLSA_c24560 5dcee926029ceb341dd1e5e1e1d59e6b 247 SUPERFAMILY SSF51556 1 245 2.31E-50 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c24560 5dcee926029ceb341dd1e5e1e1d59e6b 247 Pfam PF01026 TatD related DNase 3 242 3.4E-47 T 12-10-2018 IPR001130 TatD family GO:0016788 CLSA_c24560 5dcee926029ceb341dd1e5e1e1d59e6b 247 PIRSF PIRSF005902 1 247 5.8E-48 T 12-10-2018 IPR001130 TatD family GO:0016788 CLSA_c15300 78d86a5362a996969ff0649973ad0bcc 241 Pfam PF13649 Methyltransferase domain 35 133 1.8E-18 T 12-10-2018 CLSA_c15300 78d86a5362a996969ff0649973ad0bcc 241 SUPERFAMILY SSF53335 2 241 7.78E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c15300 78d86a5362a996969ff0649973ad0bcc 241 Gene3D G3DSA:3.40.50.150 9 222 2.3E-44 T 12-10-2018 CLSA_c15300 78d86a5362a996969ff0649973ad0bcc 241 Gene3D G3DSA:2.20.25.110 141 199 2.3E-44 T 12-10-2018 CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 Pfam PF01966 HD domain 482 626 3.8E-16 T 12-10-2018 IPR006674 HD domain CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 Gene3D G3DSA:1.10.3210.10 452 699 6.8E-21 T 12-10-2018 CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 Pfam PF07697 7TM-HD extracellular 44 263 6.9E-41 T 12-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 SMART SM00471 478 636 3.1E-8 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 Pfam PF07698 7TM receptor with intracellular HD hydrolase 274 457 3.7E-41 T 12-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 SUPERFAMILY SSF109604 481 671 2.28E-16 T 12-10-2018 CLSA_c10970 57eaef2d2468e9ba92f11dcad73ef70d 706 TIGRFAM TIGR00277 HDIG: HDIG domain 479 577 9.4E-24 T 12-10-2018 IPR006675 HDIG domain CLSA_c21950 a828b825e312c4b6a94bf91ba61f2648 261 Gene3D G3DSA:3.30.420.10 1 169 7.4E-37 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c21950 a828b825e312c4b6a94bf91ba61f2648 261 Gene3D G3DSA:3.40.50.10190 194 260 1.8E-8 T 12-10-2018 IPR036420 BRCT domain superfamily CLSA_c21950 a828b825e312c4b6a94bf91ba61f2648 261 Pfam PF00929 Exonuclease 4 156 7.0E-25 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c21950 a828b825e312c4b6a94bf91ba61f2648 261 SUPERFAMILY SSF53098 1 174 1.85E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c21950 a828b825e312c4b6a94bf91ba61f2648 261 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 165 1.3E-20 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c21950 a828b825e312c4b6a94bf91ba61f2648 261 SMART SM00479 2 166 1.6E-16 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c14820 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c14820 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c33980 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c33980 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c23750 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c23750 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c14040 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c14040 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c04500 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c04500 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c43380 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c43380 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c09010 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c09010 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c00990 d197a6bb40500d9796dcbc8112d8c470 412 ProSitePatterns PS01007 Transposases, Mutator family, signature. 241 265 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c00990 d197a6bb40500d9796dcbc8112d8c470 412 Pfam PF00872 Transposase, Mutator family 13 387 8.9E-116 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c24600 ee00f27e1bea9576b75e153262217da5 492 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 135 282 3.6E-12 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CLSA_c15490 5a6cddc6fda94fb3342a9786f1532a77 134 Pfam PF12788 YmaF family 27 122 7.1E-40 T 12-10-2018 IPR024307 YmaF CLSA_c17110 b4555ba10e8fae09f2a2e1688e601d12 319 SUPERFAMILY SSF46689 269 318 3.4E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c17110 b4555ba10e8fae09f2a2e1688e601d12 319 SMART SM00342 233 316 1.0E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c17110 b4555ba10e8fae09f2a2e1688e601d12 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 3.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c17110 b4555ba10e8fae09f2a2e1688e601d12 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 3.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c17110 b4555ba10e8fae09f2a2e1688e601d12 319 Pfam PF12833 Helix-turn-helix domain 244 317 6.8E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c17110 b4555ba10e8fae09f2a2e1688e601d12 319 Gene3D G3DSA:1.10.10.60 215 319 1.7E-23 T 12-10-2018 CLSA_c03850 e8d7eccc26483609c12ebcbd0caafb4c 485 SUPERFAMILY SSF75304 1 483 2.88E-165 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLSA_c03850 e8d7eccc26483609c12ebcbd0caafb4c 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 91.598 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLSA_c03850 e8d7eccc26483609c12ebcbd0caafb4c 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 1.1E-194 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLSA_c03850 e8d7eccc26483609c12ebcbd0caafb4c 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CLSA_c03850 e8d7eccc26483609c12ebcbd0caafb4c 485 Gene3D G3DSA:3.90.1300.10 2 485 3.1E-194 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLSA_c03850 e8d7eccc26483609c12ebcbd0caafb4c 485 Pfam PF01425 Amidase 24 465 1.6E-159 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 Hamap MF_01393 ATP synthase subunit a [atpB]. 55 283 11.739 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 Gene3D G3DSA:1.20.120.220 129 283 1.3E-29 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 Pfam PF00119 ATP synthase A chain 81 276 7.2E-44 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 SUPERFAMILY SSF81336 129 276 8.24E-27 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 PRINTS PR00123 ATP synthase A subunit signature 212 234 4.7E-10 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 PRINTS PR00123 ATP synthase A subunit signature 137 153 4.7E-10 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 PRINTS PR00123 ATP synthase A subunit signature 264 279 4.7E-10 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05090 6462df13a0955476fcc606a9af7cbfd6 283 ProSitePatterns PS00449 ATP synthase a subunit signature. 215 224 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c34260 0399c9cef1758fe7d50d69f561df44c3 147 SMART SM00347 33 137 1.4E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c34260 0399c9cef1758fe7d50d69f561df44c3 147 SUPERFAMILY SSF46785 13 146 6.36E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c34260 0399c9cef1758fe7d50d69f561df44c3 147 Gene3D G3DSA:1.10.10.10 1 147 1.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c34260 0399c9cef1758fe7d50d69f561df44c3 147 Pfam PF01047 MarR family 40 100 3.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 SUPERFAMILY SSF53850 95 300 7.6E-27 T 12-10-2018 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 SUPERFAMILY SSF46785 6 114 1.88E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 Pfam PF03466 LysR substrate binding domain 94 299 1.0E-25 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.9E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 Gene3D G3DSA:3.40.190.290 96 305 1.1E-32 T 12-10-2018 CLSA_c08950 f31e1294878f3530d8773fcf1b3fc95a 315 Gene3D G3DSA:1.10.10.10 7 95 2.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c28620 e14058efeb4904c9a719971c5a9c39f6 137 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 16 132 1.0E-18 T 12-10-2018 IPR010181 CGCAxxGCC motif CLSA_c28620 e14058efeb4904c9a719971c5a9c39f6 137 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 16 131 3.8E-32 T 12-10-2018 IPR010181 CGCAxxGCC motif CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 Gene3D G3DSA:3.50.50.60 112 228 4.8E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 Gene3D G3DSA:3.50.50.60 237 414 8.9E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 7 92 2.0E-22 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 SUPERFAMILY SSF51971 305 410 6.47E-7 T 12-10-2018 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 Gene3D G3DSA:1.10.1060.10 1 111 4.3E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 SUPERFAMILY SSF46548 6 122 3.19E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 337 353 1.2E-19 T 12-10-2018 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 133 1.2E-19 T 12-10-2018 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 259 1.2E-19 T 12-10-2018 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 365 387 1.2E-19 T 12-10-2018 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 113 400 2.1E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 261 3.2E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 375 393 3.2E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 135 3.2E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 360 3.2E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c17720 527be6e65daeecee1b66f7bde4edd204 414 SUPERFAMILY SSF51971 113 344 2.24E-53 T 12-10-2018 CLSA_c45090 b1d623e5a7c933c1eb522fedf32c4924 263 SMART SM00849 11 191 4.4E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c45090 b1d623e5a7c933c1eb522fedf32c4924 263 Gene3D G3DSA:3.60.15.10 5 248 1.4E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c45090 b1d623e5a7c933c1eb522fedf32c4924 263 Pfam PF00753 Metallo-beta-lactamase superfamily 10 206 8.3E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c45090 b1d623e5a7c933c1eb522fedf32c4924 263 SUPERFAMILY SSF56281 2 224 4.06E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c38530 f7ac7f74002c5c83ea5f4a149f93083e 395 Gene3D G3DSA:2.30.130.10 1 72 8.0E-24 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 CLSA_c38530 f7ac7f74002c5c83ea5f4a149f93083e 395 SUPERFAMILY SSF88697 5 72 5.72E-19 T 12-10-2018 IPR015947 PUA-like superfamily CLSA_c38530 f7ac7f74002c5c83ea5f4a149f93083e 395 Gene3D G3DSA:3.40.50.150 181 395 7.1E-61 T 12-10-2018 CLSA_c38530 f7ac7f74002c5c83ea5f4a149f93083e 395 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 113 346 1.5E-24 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CLSA_c38530 f7ac7f74002c5c83ea5f4a149f93083e 395 Gene3D G3DSA:3.30.750.80 73 180 1.4E-37 T 12-10-2018 CLSA_c38530 f7ac7f74002c5c83ea5f4a149f93083e 395 SUPERFAMILY SSF53335 80 391 2.84E-67 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 Pfam PF02901 Pyruvate formate lyase-like 26 616 1.7E-197 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 Pfam PF01228 Glycine radical 633 740 1.7E-35 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 ProSitePatterns PS00850 Glycine radical domain signature. 729 737 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 SUPERFAMILY SSF51998 10 758 9.16E-267 T 12-10-2018 CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 PIRSF PIRSF000379 12 759 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLSA_c16410 3665660f3c2526e5bf6d7ae88fb0e618 759 Gene3D G3DSA:3.20.70.20 8 759 3.2E-293 T 12-10-2018 CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 226 347 8.1E-16 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 SUPERFAMILY SSF52518 7 167 2.54E-18 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 SUPERFAMILY SSF52518 185 373 3.04E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 TIGRFAM TIGR03297 Ppyr-DeCO2ase: phosphonopyruvate decarboxylase 16 375 4.1E-153 T 12-10-2018 IPR017684 Phosphonopyruvate decarboxylase GO:0032923|GO:0033980 KEGG: 00440+4.1.1.82|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7510|MetaCyc: PWY-7769 CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 168 4.0E-16 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 Gene3D G3DSA:3.40.50.970 6 174 2.3E-12 T 12-10-2018 CLSA_c08740 247c09b79189531d6337ab794ab3b555 377 Gene3D G3DSA:3.40.50.970 183 375 2.9E-27 T 12-10-2018 CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 Pfam PF00005 ABC transporter 273 423 4.5E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 Pfam PF00005 ABC transporter 21 172 6.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 SMART SM00382 30 227 3.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 SMART SM00382 282 474 0.0072 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 SUPERFAMILY SSF52540 259 484 3.31E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 Gene3D G3DSA:3.40.50.300 267 493 1.8E-41 T 12-10-2018 CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 SUPERFAMILY SSF52540 5 233 2.07E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c36450 dc2081ddede45a0afff32c4edeac07c6 500 Gene3D G3DSA:3.40.50.300 2 247 2.0E-56 T 12-10-2018 CLSA_c32120 20ecb7c8b5dc5f70e708290ce6d0445c 213 Pfam PF04199 Putative cyclase 5 153 4.8E-30 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c32120 20ecb7c8b5dc5f70e708290ce6d0445c 213 SUPERFAMILY SSF102198 1 210 1.31E-63 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c32120 20ecb7c8b5dc5f70e708290ce6d0445c 213 Gene3D G3DSA:3.50.30.50 1 210 8.9E-66 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 156 69.765 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 Pfam PF01668 SmpB protein 11 152 2.2E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 133 1.0E-54 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 Gene3D G3DSA:2.40.280.10 2 129 4.1E-49 T 12-10-2018 IPR023620 Small protein B CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 SUPERFAMILY SSF74982 4 133 3.66E-51 T 12-10-2018 IPR023620 Small protein B CLSA_c40340 ff38cf6d1060808fe269765f60b711af 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 7.1E-57 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 CLSA_c38090 5fb8d68e7f999a4897901f25a281f943 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 24 33 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c38090 5fb8d68e7f999a4897901f25a281f943 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 47 61 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c38090 5fb8d68e7f999a4897901f25a281f943 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 9 67 1.6E-25 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c38090 5fb8d68e7f999a4897901f25a281f943 68 Gene3D G3DSA:1.10.8.910 9 68 2.1E-23 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c31370 a89ed6511cfde5dd0cf01f1737646f2b 305 Pfam PF06912 Protein of unknown function (DUF1275) 89 291 5.3E-49 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 CLSA_c10480 08c66cd2725d077e7c7c1adb7cfbcdc1 348 Gene3D G3DSA:1.10.287.950 131 348 1.2E-37 T 12-10-2018 CLSA_c10480 08c66cd2725d077e7c7c1adb7cfbcdc1 348 SUPERFAMILY SSF58104 172 346 1.18E-42 T 12-10-2018 CLSA_c10480 08c66cd2725d077e7c7c1adb7cfbcdc1 348 SMART SM00283 132 348 1.2E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10480 08c66cd2725d077e7c7c1adb7cfbcdc1 348 Pfam PF10114 Sensory domain found in PocR 19 181 2.3E-53 T 12-10-2018 IPR018771 PocR domain CLSA_c10480 08c66cd2725d077e7c7c1adb7cfbcdc1 348 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 230 347 2.3E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c38440 9f7d5c17b57f9d8cee5e8ad933cff3c9 354 Gene3D G3DSA:3.60.15.10 3 354 3.4E-104 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c38440 9f7d5c17b57f9d8cee5e8ad933cff3c9 354 SUPERFAMILY SSF56281 35 302 1.74E-26 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c38440 9f7d5c17b57f9d8cee5e8ad933cff3c9 354 Pfam PF12706 Beta-lactamase superfamily domain 106 282 1.4E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 618 43.366 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 SUPERFAMILY SSF52922 485 617 6.15E-25 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 Gene3D G3DSA:3.40.50.970 310 490 4.8E-67 T 12-10-2018 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 614 2.7E-237 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 Pfam PF02780 Transketolase, C-terminal domain 488 609 5.6E-24 T 12-10-2018 IPR033248 Transketolase, C-terminal domain CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 SUPERFAMILY SSF52518 2 375 3.93E-81 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 Pfam PF02779 Transketolase, pyrimidine binding domain 314 472 1.4E-38 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 Gene3D G3DSA:3.40.50.920 491 618 2.0E-31 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 278 9.8E-118 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c26840 8b5b8fd5a4637fa2622cdbd366b778e9 618 SMART SM00861 313 477 5.0E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 PIRSF PIRSF033722 1 334 1.9E-143 T 12-10-2018 IPR017019 Predicted DNA replication protein, bacterial CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 SUPERFAMILY SSF158499 210 275 5.62E-15 T 12-10-2018 IPR034829 DnaD-like domain superfamily CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 Pfam PF07261 Replication initiation and membrane attachment 225 279 5.5E-13 T 12-10-2018 IPR006343 DnaD domain CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 Pfam PF07261 Replication initiation and membrane attachment 124 194 6.3E-25 T 12-10-2018 IPR006343 DnaD domain CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 Gene3D G3DSA:1.10.10.630 117 194 1.9E-16 T 12-10-2018 IPR034829 DnaD-like domain superfamily CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 Gene3D G3DSA:1.10.10.630 217 280 5.4E-13 T 12-10-2018 IPR034829 DnaD-like domain superfamily CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 SUPERFAMILY SSF158499 123 188 2.35E-14 T 12-10-2018 IPR034829 DnaD-like domain superfamily CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 218 279 2.9E-15 T 12-10-2018 IPR006343 DnaD domain CLSA_c45160 223f7ce93f460c902d1953556f33ef17 334 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 124 193 5.2E-15 T 12-10-2018 IPR006343 DnaD domain CLSA_c44400 fc84983f2dec5f32cd7c3a42bccac83e 307 SUPERFAMILY SSF141986 165 297 5.49E-36 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLSA_c44400 fc84983f2dec5f32cd7c3a42bccac83e 307 Pfam PF02016 LD-carboxypeptidase 14 291 7.6E-70 T 12-10-2018 IPR003507 Peptidase family S66 CLSA_c44400 fc84983f2dec5f32cd7c3a42bccac83e 307 Gene3D G3DSA:3.50.30.60 167 298 1.5E-33 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLSA_c44400 fc84983f2dec5f32cd7c3a42bccac83e 307 SUPERFAMILY SSF52317 3 150 6.87E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c44400 fc84983f2dec5f32cd7c3a42bccac83e 307 PIRSF PIRSF028757 2 306 7.5E-75 T 12-10-2018 IPR003507 Peptidase family S66 CLSA_c44400 fc84983f2dec5f32cd7c3a42bccac83e 307 Gene3D G3DSA:3.40.50.10740 2 154 1.0E-45 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CLSA_c09940 7dd7c7e6f5ef1b226121b9d68e7c0bd3 455 PIRSF PIRSF006351 4 449 4.7E-129 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CLSA_c09940 7dd7c7e6f5ef1b226121b9d68e7c0bd3 455 Pfam PF02378 Phosphotransferase system, EIIC 32 365 1.1E-48 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c09940 7dd7c7e6f5ef1b226121b9d68e7c0bd3 455 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 440 2.1E-103 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CLSA_c30490 674c4c9eb686bc5f0ae7429bcc415461 481 Pfam PF01471 Putative peptidoglycan binding domain 374 434 6.2E-12 T 12-10-2018 IPR002477 Peptidoglycan binding-like CLSA_c30490 674c4c9eb686bc5f0ae7429bcc415461 481 Gene3D G3DSA:1.10.101.10 363 441 4.7E-16 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CLSA_c30490 674c4c9eb686bc5f0ae7429bcc415461 481 SUPERFAMILY SSF47090 362 435 7.69E-14 T 12-10-2018 IPR036365 PGBD-like superfamily CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 SMART SM00267 133 305 1.5E-30 T 12-10-2018 IPR000160 GGDEF domain CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 304 6.2E-29 T 12-10-2018 IPR000160 GGDEF domain CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 SUPERFAMILY SSF55073 150 307 4.08E-38 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 Gene3D G3DSA:3.30.70.270 139 315 1.3E-38 T 12-10-2018 CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 Pfam PF00563 EAL domain 323 556 1.0E-68 T 12-10-2018 IPR001633 EAL domain CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 Gene3D G3DSA:3.20.20.450 316 568 2.2E-89 T 12-10-2018 IPR035919 EAL domain superfamily CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 SMART SM00052 315 561 3.8E-95 T 12-10-2018 IPR001633 EAL domain CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 SUPERFAMILY SSF141868 322 565 7.59E-83 T 12-10-2018 IPR035919 EAL domain superfamily CLSA_c40160 d387e9515f56737a54a4f258c9a2e064 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 300 1.9E-31 T 12-10-2018 IPR000160 GGDEF domain CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 Gene3D G3DSA:1.20.1250.20 261 434 8.6E-16 T 12-10-2018 CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 502 1.0E-123 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 SUPERFAMILY SSF103473 8 505 4.32E-68 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 Gene3D G3DSA:1.20.1720.10 15 219 5.2E-45 T 12-10-2018 CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 2.0E-5 T 12-10-2018 CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 2.0E-5 T 12-10-2018 CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 2.0E-5 T 12-10-2018 CLSA_c10160 4b3319545927246daca86ffe1a31d755 507 Pfam PF07690 Major Facilitator Superfamily 19 410 2.7E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c22220 25d4a8310db38bac4e7bda927c0654fb 616 Pfam PF03961 Flagellar Assembly Protein A 105 588 1.2E-80 T 12-10-2018 IPR005646 Flagellar assembly protein A CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 SUPERFAMILY SSF52540 594 823 3.06E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 SMART SM00487 616 797 2.0E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 Gene3D G3DSA:3.40.50.10810 621 824 2.1E-65 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 Gene3D G3DSA:1.20.120.850 845 1054 1.5E-78 T 12-10-2018 CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 Pfam PF08455 Bacterial SNF2 helicase associated 245 613 1.9E-56 T 12-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 Pfam PF00176 SNF2 family N-terminal domain 639 891 2.3E-55 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 SMART SM00490 930 1013 3.2E-24 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 SUPERFAMILY SSF52540 825 1070 2.93E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 Gene3D G3DSA:3.40.50.300 830 1027 1.5E-78 T 12-10-2018 CLSA_c17680 51fb1d5928ba5dc73eb0aabde15ad40f 1072 Pfam PF00271 Helicase conserved C-terminal domain 903 1013 1.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c44760 a1e3727f41a85c3bf54d2a4e7e1683e5 551 Gene3D G3DSA:3.30.750.24 420 549 1.7E-26 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c44760 a1e3727f41a85c3bf54d2a4e7e1683e5 551 Pfam PF01740 STAS domain 440 537 4.1E-15 T 12-10-2018 IPR002645 STAS domain CLSA_c44760 a1e3727f41a85c3bf54d2a4e7e1683e5 551 TIGRFAM TIGR00815 sulP: sulfate permease 17 536 6.8E-118 T 12-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CLSA_c44760 a1e3727f41a85c3bf54d2a4e7e1683e5 551 SUPERFAMILY SSF52091 438 541 4.51E-16 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c44760 a1e3727f41a85c3bf54d2a4e7e1683e5 551 Pfam PF00916 Sulfate permease family 20 382 5.0E-86 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 SMART SM00116 226 276 3.7 T 12-10-2018 IPR000644 CBS domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 SMART SM00116 288 336 4.1 T 12-10-2018 IPR000644 CBS domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 Pfam PF03471 Transporter associated domain 352 427 8.1E-16 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 Pfam PF01595 Domain of unknown function DUF21 9 202 2.6E-45 T 12-10-2018 IPR002550 CNNM, transmembrane domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 SUPERFAMILY SSF54631 205 339 1.34E-29 T 12-10-2018 CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 SUPERFAMILY SSF56176 350 432 7.09E-19 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 Pfam PF00571 CBS domain 217 270 1.0E-5 T 12-10-2018 IPR000644 CBS domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 Pfam PF00571 CBS domain 287 336 3.6E-5 T 12-10-2018 IPR000644 CBS domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 SMART SM01091 351 429 3.5E-20 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 Gene3D G3DSA:3.10.580.10 197 344 1.1E-53 T 12-10-2018 CLSA_c10430 9180847a3fde1e8a704afd6e116b8999 435 Gene3D G3DSA:3.30.465.10 345 427 6.2E-19 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CLSA_c12940 ab5f4b07e62620775af8cb243534be44 226 SUPERFAMILY SSF52540 1 221 9.29E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12940 ab5f4b07e62620775af8cb243534be44 226 Gene3D G3DSA:3.40.50.300 1 223 1.1E-68 T 12-10-2018 CLSA_c12940 ab5f4b07e62620775af8cb243534be44 226 PIRSF PIRSF039085 1 223 1.7E-88 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLSA_c12940 ab5f4b07e62620775af8cb243534be44 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c12940 ab5f4b07e62620775af8cb243534be44 226 SMART SM00382 26 218 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c12940 ab5f4b07e62620775af8cb243534be44 226 Pfam PF00005 ABC transporter 17 170 8.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c33250 9f0fae9399ff13c634d5e80f982832fe 390 Gene3D G3DSA:3.40.50.2300 153 285 3.2E-104 T 12-10-2018 CLSA_c33250 9f0fae9399ff13c634d5e80f982832fe 390 SUPERFAMILY SSF53822 36 382 5.57E-85 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c33250 9f0fae9399ff13c634d5e80f982832fe 390 Gene3D G3DSA:3.40.50.2300 60 367 3.2E-104 T 12-10-2018 CLSA_c33250 9f0fae9399ff13c634d5e80f982832fe 390 Pfam PF13458 Periplasmic binding protein 38 376 3.2E-56 T 12-10-2018 IPR028081 Leucine-binding protein domain CLSA_c06390 61a6374670141e7d983a32705a4de226 482 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 17 398 1.0E-102 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CLSA_c06390 61a6374670141e7d983a32705a4de226 482 Gene3D G3DSA:2.40.50.140 30 109 9.4E-17 T 12-10-2018 CLSA_c06390 61a6374670141e7d983a32705a4de226 482 Pfam PF10150 Ribonuclease E/G family 105 368 7.6E-79 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CLSA_c06390 61a6374670141e7d983a32705a4de226 482 SMART SM00316 36 103 1.4E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c06390 61a6374670141e7d983a32705a4de226 482 SUPERFAMILY SSF50249 38 108 2.48E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c24720 a65af84e29a3b1ac05521a0c05b94bb0 169 Gene3D G3DSA:2.40.50.1020 55 160 1.3E-12 T 12-10-2018 CLSA_c24720 a65af84e29a3b1ac05521a0c05b94bb0 169 SMART SM00850 68 165 9.1E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c24720 a65af84e29a3b1ac05521a0c05b94bb0 169 Pfam PF04397 LytTr DNA-binding domain 71 162 8.0E-19 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 2.9E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 SUPERFAMILY SSF47413 2 63 7.74E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 12-10-2018 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 Gene3D G3DSA:3.40.50.2300 62 154 1.6E-29 T 12-10-2018 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 Gene3D G3DSA:3.40.50.2300 156 334 2.4E-47 T 12-10-2018 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 SUPERFAMILY SSF53822 64 332 4.71E-77 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 Gene3D G3DSA:1.10.260.40 1 61 3.4E-21 T 12-10-2018 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 Pfam PF13377 Periplasmic binding protein-like domain 172 331 1.8E-32 T 12-10-2018 CLSA_c15920 6dec9b9a5c57c942c4f981d1f79c89cc 336 SMART SM00354 3 74 1.1E-29 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c37910 c57487ec565918f3d6502c683142a3ea 237 Pfam PF04405 Domain of Unknown function (DUF542) 7 59 8.1E-21 T 12-10-2018 IPR019903 Repair of iron centres family CLSA_c37910 c57487ec565918f3d6502c683142a3ea 237 Pfam PF01814 Hemerythrin HHE cation binding domain 86 231 2.1E-19 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CLSA_c37910 c57487ec565918f3d6502c683142a3ea 237 Gene3D G3DSA:1.20.120.520 84 236 4.9E-16 T 12-10-2018 CLSA_c37910 c57487ec565918f3d6502c683142a3ea 237 SUPERFAMILY SSF140683 1 63 9.94E-5 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily CLSA_c37910 c57487ec565918f3d6502c683142a3ea 237 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 10 230 2.5E-81 T 12-10-2018 IPR019903 Repair of iron centres family CLSA_c18870 90166e015a29358b7d7f7a0e69b7ceaa 143 Gene3D G3DSA:1.10.357.10 1 141 3.3E-44 T 12-10-2018 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 Pfam PF00654 Voltage gated chloride channel 76 417 4.5E-93 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 SUPERFAMILY SSF116726 450 515 1.18E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 SUPERFAMILY SSF81340 11 433 7.46E-108 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 Gene3D G3DSA:3.30.70.1450 442 517 4.9E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 PRINTS PR00762 Chloride channel signature 168 187 1.3E-24 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 PRINTS PR00762 Chloride channel signature 88 105 1.3E-24 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 PRINTS PR00762 Chloride channel signature 332 352 1.3E-24 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 PRINTS PR00762 Chloride channel signature 385 404 1.3E-24 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 PRINTS PR00762 Chloride channel signature 367 383 1.3E-24 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 Gene3D G3DSA:1.10.3080.10 5 440 2.8E-109 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CLSA_c32860 e7cd86d5a65df339198e1bab7d80c84b 528 Pfam PF02080 TrkA-C domain 452 514 2.4E-14 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLSA_c29120 3b15b9afaa3009d07c112241ad630ffe 178 Gene3D G3DSA:3.40.50.300 1 177 1.5E-14 T 12-10-2018 CLSA_c29120 3b15b9afaa3009d07c112241ad630ffe 178 SUPERFAMILY SSF52540 3 145 4.99E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11500 ab59cd446da4d8654eec3712517a6197 143 Gene3D G3DSA:3.30.700.10 20 143 3.8E-20 T 12-10-2018 CLSA_c11500 ab59cd446da4d8654eec3712517a6197 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 39 4.5E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c11500 ab59cd446da4d8654eec3712517a6197 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 40 8.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c11500 ab59cd446da4d8654eec3712517a6197 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c11500 ab59cd446da4d8654eec3712517a6197 143 SUPERFAMILY SSF54523 20 125 8.63E-17 T 12-10-2018 CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 Gene3D G3DSA:3.40.50.300 5 320 1.7E-95 T 12-10-2018 CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 317 1.6E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 SUPERFAMILY SSF52540 8 252 9.94E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 297 4.2E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 Pfam PF00005 ABC transporter 29 181 1.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c21130 86171a2e17df7e9cb0a012d534bdc5cc 320 SMART SM00382 38 230 3.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 9.0E-26 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 Gene3D G3DSA:3.40.50.720 1 178 1.5E-43 T 12-10-2018 CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 302 7.1E-44 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 SUPERFAMILY SSF48179 184 302 3.74E-11 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 Gene3D G3DSA:1.10.1040.10 181 304 2.6E-20 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 SUPERFAMILY SSF51735 1 173 6.9E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c26050 a62c40c076e3520218b6a5a2431d1359 304 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 183 302 8.4E-15 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain CLSA_c26350 d33291363555595f3dff4f1d17dd669e 248 Pfam PF02616 Segregation and condensation protein ScpA 21 241 3.3E-27 T 12-10-2018 IPR003768 Segregation and condensation protein A CLSA_c26350 d33291363555595f3dff4f1d17dd669e 248 Hamap MF_01805 Segregation and condensation protein A [scpA]. 4 245 22.759 T 12-10-2018 IPR003768 Segregation and condensation protein A CLSA_c26860 565e106d63404abb6f87809a3dd1a0ec 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 12.545 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLSA_c26860 565e106d63404abb6f87809a3dd1a0ec 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 62 1.9E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLSA_c26860 565e106d63404abb6f87809a3dd1a0ec 74 PIRSF PIRSF006488 1 74 4.8E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLSA_c26860 565e106d63404abb6f87809a3dd1a0ec 74 Pfam PF02609 Exonuclease VII small subunit 7 57 3.3E-17 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLSA_c26860 565e106d63404abb6f87809a3dd1a0ec 74 Gene3D G3DSA:1.10.287.1040 1 74 2.3E-16 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 CLSA_c26860 565e106d63404abb6f87809a3dd1a0ec 74 SUPERFAMILY SSF116842 3 66 3.14E-17 T 12-10-2018 CLSA_c38010 87c82cb7e632b1c913cc3c193696c0a4 251 Gene3D G3DSA:1.20.120.520 76 251 2.0E-41 T 12-10-2018 CLSA_c38010 87c82cb7e632b1c913cc3c193696c0a4 251 Pfam PF01814 Hemerythrin HHE cation binding domain 84 222 1.9E-20 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CLSA_c38010 87c82cb7e632b1c913cc3c193696c0a4 251 Pfam PF04282 Family of unknown function (DUF438) 9 74 2.0E-20 T 12-10-2018 IPR007380 Domain of unknown function DUF438 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 SUPERFAMILY SSF81653 220 304 7.59E-12 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 SUPERFAMILY SSF56784 397 693 4.32E-33 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 184 677 2.3E-53 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 Pfam PF00122 E1-E2 ATPase 218 342 1.9E-15 T 12-10-2018 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 400 406 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 Gene3D G3DSA:2.70.150.20 212 309 3.5E-12 T 12-10-2018 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 Gene3D G3DSA:3.40.50.1000 380 648 2.1E-60 T 12-10-2018 IPR023214 HAD superfamily CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 Pfam PF00702 haloacid dehalogenase-like hydrolase 396 610 1.3E-22 T 12-10-2018 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 Gene3D G3DSA:3.40.1110.10 409 528 2.1E-60 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 532 2.8E-8 T 12-10-2018 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 615 2.8E-8 T 12-10-2018 CLSA_c33970 d865b35219d7549bdafb0fb7d88d8255 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 398 412 2.8E-8 T 12-10-2018 CLSA_c14840 6d95d5053caa4eddf8fc38d04c0ade7a 137 Gene3D G3DSA:1.10.10.10 1 136 3.7E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c14840 6d95d5053caa4eddf8fc38d04c0ade7a 137 SUPERFAMILY SSF46785 3 135 2.11E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c14840 6d95d5053caa4eddf8fc38d04c0ade7a 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.7E-32 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c14840 6d95d5053caa4eddf8fc38d04c0ade7a 137 Pfam PF02082 Transcriptional regulator 1 83 3.3E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type CLSA_c14840 6d95d5053caa4eddf8fc38d04c0ade7a 137 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CLSA_c25470 07b8a00e9d88b48c537614352e55f42a 225 Gene3D G3DSA:3.30.110.170 27 222 6.8E-52 T 12-10-2018 CLSA_c25470 07b8a00e9d88b48c537614352e55f42a 225 Pfam PF04402 Protein of unknown function (DUF541) 25 222 2.5E-39 T 12-10-2018 IPR007497 Protein of unknown function DUF541 CLSA_c25470 07b8a00e9d88b48c537614352e55f42a 225 Gene3D G3DSA:3.30.70.2970 37 143 6.8E-52 T 12-10-2018 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 59 7.6E-15 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 1.8E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 1.8E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.8E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.8E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 1.8E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PRINTS PR00996 Glutamate methyltransferase family signature 28 41 1.8E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 Gene3D G3DSA:3.40.50.150 73 271 5.0E-61 T 12-10-2018 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 SMART SM00138 6 271 9.7E-85 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 Gene3D G3DSA:1.10.155.10 1 72 9.4E-16 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 PIRSF PIRSF000410 1 271 4.3E-91 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 SUPERFAMILY SSF53335 74 269 3.82E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 262 3.6E-60 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLSA_c24160 75000c1d6fce29a761e7f06ef39a6ed4 271 SUPERFAMILY SSF47757 2 73 3.79E-14 T 12-10-2018 CLSA_c17560 c1fdc9d511d4ae61bb297cd5ae4d2c87 326 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 218 1.3E-65 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 CLSA_c17560 c1fdc9d511d4ae61bb297cd5ae4d2c87 326 Pfam PF13190 PDGLE domain 237 315 2.0E-10 T 12-10-2018 IPR025937 PDGLE domain CLSA_c17560 c1fdc9d511d4ae61bb297cd5ae4d2c87 326 Gene3D G3DSA:1.10.1760.20 1 218 9.6E-78 T 12-10-2018 CLSA_c17560 c1fdc9d511d4ae61bb297cd5ae4d2c87 326 ProDom PD074023 BIOSYNTHESIS COBALAMIN CBIM COBALT PRECURSOR SIGNAL NICKEL MEMBRANE ABC PROTEIN 229 304 1.0E-21 T 12-10-2018 IPR020486 Probable fused nickel transport protein LarMN-like CLSA_c26500 aef492389a8029a78ef5bdacfb4d587e 317 Pfam PF03595 Voltage-dependent anion channel 20 300 5.2E-19 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CLSA_c26500 aef492389a8029a78ef5bdacfb4d587e 317 Gene3D G3DSA:1.50.10.150 8 312 5.0E-33 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily CLSA_c30630 760c5b1c36b51acb05ba1cd45b270a1f 280 SUPERFAMILY SSF89550 1 275 1.45E-43 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c30630 760c5b1c36b51acb05ba1cd45b270a1f 280 SMART SM00481 4 69 1.9E-19 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLSA_c30630 760c5b1c36b51acb05ba1cd45b270a1f 280 Gene3D G3DSA:1.10.150.650 99 170 1.2E-71 T 12-10-2018 CLSA_c30630 760c5b1c36b51acb05ba1cd45b270a1f 280 Gene3D G3DSA:3.20.20.140 4 245 1.2E-71 T 12-10-2018 CLSA_c30630 760c5b1c36b51acb05ba1cd45b270a1f 280 Pfam PF02811 PHP domain 5 159 9.7E-11 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c26750 36a1777c2aa51b2522b2eb3f0edd6b3a 788 Gene3D G3DSA:3.10.450.50 732 788 1.6E-9 T 12-10-2018 CLSA_c26750 36a1777c2aa51b2522b2eb3f0edd6b3a 788 Pfam PF02810 SEC-C motif 770 788 5.7E-10 T 12-10-2018 IPR004027 SEC-C motif CLSA_c26750 36a1777c2aa51b2522b2eb3f0edd6b3a 788 SUPERFAMILY SSF103642 767 787 3.92E-7 T 12-10-2018 CLSA_c15660 ad273ef07e19a85c60c04852cdfd9d59 177 SUPERFAMILY SSF69360 44 176 7.06E-17 T 12-10-2018 CLSA_c15660 ad273ef07e19a85c60c04852cdfd9d59 177 Gene3D G3DSA:2.20.120.10 120 176 7.1E-6 T 12-10-2018 CLSA_c15660 ad273ef07e19a85c60c04852cdfd9d59 177 Gene3D G3DSA:2.10.270.10 32 119 5.8E-7 T 12-10-2018 CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 Pfam PF01047 MarR family 40 85 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 SUPERFAMILY SSF46785 14 142 9.6E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 Gene3D G3DSA:1.10.10.10 11 143 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 1.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20350 996f9ea7d7021af772ee20cf37ea1cc3 145 SMART SM00347 31 130 2.4E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 PRINTS PR00702 Acriflavin resistance protein family signature 243 266 3.0E-7 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 PRINTS PR00702 Acriflavin resistance protein family signature 296 320 3.0E-7 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 PRINTS PR00702 Acriflavin resistance protein family signature 371 394 3.0E-7 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 409 31.594 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 157 387 3.3E-61 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 Gene3D G3DSA:1.20.1640.10 223 400 1.7E-15 T 12-10-2018 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 Gene3D G3DSA:3.30.1360.200 83 222 5.1E-27 T 12-10-2018 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 SUPERFAMILY SSF82866 204 396 9.81E-38 T 12-10-2018 CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 Pfam PF02355 Protein export membrane protein 228 394 1.8E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLSA_c28730 cd83c3790d05eca83f1834b88a2c966e 420 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 129 394 7.1E-84 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 SUPERFAMILY SSF81606 160 347 2.09E-11 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 Gene3D G3DSA:3.30.565.10 6 124 2.3E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 185 345 4.7E-9 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 SMART SM00331 155 348 1.3E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 Pfam PF13581 Histidine kinase-like ATPase domain 12 117 4.4E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 SUPERFAMILY SSF55874 30 118 7.31E-5 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20510 855bfcf4d17d4587f9e4b76e27509b64 348 Gene3D G3DSA:3.60.40.10 155 346 2.8E-37 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c34160 67713910176716867728c3a97f691c17 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 56 5.7E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c34160 67713910176716867728c3a97f691c17 207 Gene3D G3DSA:1.10.357.10 2 173 1.0E-21 T 12-10-2018 CLSA_c34160 67713910176716867728c3a97f691c17 207 SUPERFAMILY SSF46689 3 67 2.44E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c34160 67713910176716867728c3a97f691c17 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c34160 67713910176716867728c3a97f691c17 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c25690 34f00e9d0b562f645c19302a2f2a85cf 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.7E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c25690 34f00e9d0b562f645c19302a2f2a85cf 189 Gene3D G3DSA:1.10.357.10 1 189 2.3E-48 T 12-10-2018 CLSA_c25690 34f00e9d0b562f645c19302a2f2a85cf 189 SUPERFAMILY SSF48498 78 188 1.33E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c25690 34f00e9d0b562f645c19302a2f2a85cf 189 SUPERFAMILY SSF46689 7 69 6.67E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c25690 34f00e9d0b562f645c19302a2f2a85cf 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c25690 34f00e9d0b562f645c19302a2f2a85cf 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c32530 be5f4dea6c62211ca5de5ec07f48049d 294 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 292 1.5E-47 T 12-10-2018 IPR000160 GGDEF domain CLSA_c32530 be5f4dea6c62211ca5de5ec07f48049d 294 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 290 3.1E-40 T 12-10-2018 IPR000160 GGDEF domain CLSA_c32530 be5f4dea6c62211ca5de5ec07f48049d 294 Gene3D G3DSA:3.30.70.270 126 293 2.0E-50 T 12-10-2018 CLSA_c32530 be5f4dea6c62211ca5de5ec07f48049d 294 SMART SM00267 121 294 2.3E-43 T 12-10-2018 IPR000160 GGDEF domain CLSA_c32530 be5f4dea6c62211ca5de5ec07f48049d 294 SUPERFAMILY SSF55073 137 291 3.3E-44 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c07650 8452837a53f369da9082f63b7eb75f11 353 Pfam PF13407 Periplasmic binding protein domain 43 320 9.3E-45 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c07650 8452837a53f369da9082f63b7eb75f11 353 SUPERFAMILY SSF53822 40 349 1.16E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c07650 8452837a53f369da9082f63b7eb75f11 353 Gene3D G3DSA:3.40.50.2300 153 304 4.2E-92 T 12-10-2018 CLSA_c07650 8452837a53f369da9082f63b7eb75f11 353 Gene3D G3DSA:3.40.50.2300 43 323 4.2E-92 T 12-10-2018 CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 Gene3D G3DSA:3.10.20.580 451 557 4.9E-36 T 12-10-2018 CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 357 409 1.4E-6 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 SMART SM00849 22 217 7.5E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 Gene3D G3DSA:3.40.50.10710 209 359 5.0E-186 T 12-10-2018 CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 Gene3D G3DSA:3.60.15.10 13 444 5.0E-186 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 PIRSF PIRSF004803 1 557 2.2E-242 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 555 3.5E-203 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 Hamap MF_01491 Ribonuclease J [rnj]. 5 557 47.015 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 Pfam PF00753 Metallo-beta-lactamase superfamily 21 166 2.9E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c22750 9204fd8e0a250bcbab414b3f0da41544 557 SUPERFAMILY SSF56281 10 426 4.98E-96 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 1.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 1.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 1.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 1.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 PRINTS PR00474 Glutamate 5-kinase family signature 219 239 1.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 Pfam PF00696 Amino acid kinase family 11 245 2.3E-40 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 PIRSF PIRSF000729 6 271 1.1E-98 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 ProSitePatterns PS00902 Glutamate 5-kinase signature. 217 234 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 268 1.4E-93 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 Gene3D G3DSA:3.40.1160.10 2 271 5.9E-95 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 271 37.892 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLSA_c00390 078f3a7ded5dd28746ae8b65c28e907b 271 SUPERFAMILY SSF53633 12 266 1.7E-69 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c24660 91e52993c4ac746e26f0533011733dcf 252 SUPERFAMILY SSF64167 1 251 6.41E-73 T 12-10-2018 CLSA_c24660 91e52993c4ac746e26f0533011733dcf 252 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 252 30.308 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CLSA_c24660 91e52993c4ac746e26f0533011733dcf 252 Gene3D G3DSA:3.40.1210.10 1 252 4.2E-81 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CLSA_c24660 91e52993c4ac746e26f0533011733dcf 252 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 4.3E-61 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CLSA_c24660 91e52993c4ac746e26f0533011733dcf 252 Pfam PF01975 Survival protein SurE 3 190 1.7E-61 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CLSA_c32640 dc0ca3ad9215cf62f87e0880ef5c5fd2 170 Gene3D G3DSA:2.10.270.10 17 103 2.8E-22 T 12-10-2018 CLSA_c32640 dc0ca3ad9215cf62f87e0880ef5c5fd2 170 SUPERFAMILY SSF69360 22 142 4.58E-22 T 12-10-2018 CLSA_c32640 dc0ca3ad9215cf62f87e0880ef5c5fd2 170 Pfam PF01473 Putative cell wall binding repeat 46 64 5.8E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c32640 dc0ca3ad9215cf62f87e0880ef5c5fd2 170 Pfam PF01473 Putative cell wall binding repeat 66 84 7.9E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c22630 61342a9d10a882701878eae1dc968a0c 357 SUPERFAMILY SSF56796 6 352 3.93E-57 T 12-10-2018 CLSA_c22630 61342a9d10a882701878eae1dc968a0c 357 Gene3D G3DSA:1.20.1090.10 161 357 1.9E-57 T 12-10-2018 CLSA_c22630 61342a9d10a882701878eae1dc968a0c 357 PIRSF PIRSF000112 2 356 4.6E-77 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 CLSA_c22630 61342a9d10a882701878eae1dc968a0c 357 Gene3D G3DSA:3.40.50.1970 8 160 5.1E-28 T 12-10-2018 CLSA_c22630 61342a9d10a882701878eae1dc968a0c 357 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 344 1.4E-39 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 133 196 5.2E-5 T 12-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 SUPERFAMILY SSF46689 5 67 1.9E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 Gene3D G3DSA:1.10.357.10 2 197 2.7E-33 T 12-10-2018 CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 SUPERFAMILY SSF48498 129 195 1.14E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c34060 8297de46b734c9e934eef6f94962ae5f 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.5E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c23650 45eb720f174d1e8653ec917936f7ac4c 366 Pfam PF01473 Putative cell wall binding repeat 94 106 6.9E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23650 45eb720f174d1e8653ec917936f7ac4c 366 Pfam PF01473 Putative cell wall binding repeat 135 153 5.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23650 45eb720f174d1e8653ec917936f7ac4c 366 Pfam PF01473 Putative cell wall binding repeat 116 133 0.0083 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c23650 45eb720f174d1e8653ec917936f7ac4c 366 Gene3D G3DSA:2.10.270.10 109 216 1.4E-14 T 12-10-2018 CLSA_c23650 45eb720f174d1e8653ec917936f7ac4c 366 Gene3D G3DSA:2.10.270.10 59 108 9.9E-7 T 12-10-2018 CLSA_c23650 45eb720f174d1e8653ec917936f7ac4c 366 SUPERFAMILY SSF69360 65 170 2.88E-23 T 12-10-2018 CLSA_c00840 b79dd63458bd02f1d5acc23a788dafcb 224 Gene3D G3DSA:1.10.1760.20 56 218 2.1E-52 T 12-10-2018 CLSA_c00840 b79dd63458bd02f1d5acc23a788dafcb 224 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 57 212 3.4E-48 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 CLSA_c00840 b79dd63458bd02f1d5acc23a788dafcb 224 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 59 213 2.2E-51 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 CLSA_c13010 4f429981f58a90220d04a7a87c7e3508 203 Gene3D G3DSA:3.40.50.170 1 203 1.2E-69 T 12-10-2018 CLSA_c13010 4f429981f58a90220d04a7a87c7e3508 203 Pfam PF00551 Formyl transferase 3 184 2.2E-48 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c13010 4f429981f58a90220d04a7a87c7e3508 203 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 194 3.3E-62 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CLSA_c13010 4f429981f58a90220d04a7a87c7e3508 203 SUPERFAMILY SSF53328 3 198 1.44E-50 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLSA_c13010 4f429981f58a90220d04a7a87c7e3508 203 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 190 29.812 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CLSA_c44240 a18b14ddc9ce3b65f4016b751092f165 147 Pfam PF14437 MafB19-like deaminase 4 145 4.6E-35 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CLSA_c44240 a18b14ddc9ce3b65f4016b751092f165 147 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 5 145 41.321 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CLSA_c44240 a18b14ddc9ce3b65f4016b751092f165 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 87 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLSA_c44240 a18b14ddc9ce3b65f4016b751092f165 147 Gene3D G3DSA:3.40.140.10 1 147 7.9E-53 T 12-10-2018 CLSA_c44240 a18b14ddc9ce3b65f4016b751092f165 147 SUPERFAMILY SSF53927 2 146 2.71E-47 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CLSA_c18340 3cd4124944985b623f5158bbcea090e7 198 Gene3D G3DSA:3.90.550.10 7 197 1.1E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c18340 3cd4124944985b623f5158bbcea090e7 198 SUPERFAMILY SSF53448 9 192 1.73E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c18340 3cd4124944985b623f5158bbcea090e7 198 Pfam PF12804 MobA-like NTP transferase domain 14 169 5.1E-34 T 12-10-2018 IPR025877 MobA-like NTP transferase CLSA_c42200 cfc49570dbe9c994d4c1b7adf8e61b58 131 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 7 127 1.4E-29 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CLSA_c42200 cfc49570dbe9c994d4c1b7adf8e61b58 131 SUPERFAMILY SSF81593 4 125 5.89E-33 T 12-10-2018 CLSA_c42200 cfc49570dbe9c994d4c1b7adf8e61b58 131 Gene3D G3DSA:1.20.120.330 8 129 5.6E-35 T 12-10-2018 CLSA_c42200 cfc49570dbe9c994d4c1b7adf8e61b58 131 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 8 127 2.3E-34 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CLSA_c08270 4fa52efff0e1a092c59307a748022a40 183 Pfam PF17117 Domain of unknown function (DUF5104) 51 157 1.3E-34 T 12-10-2018 IPR031344 Protein of unknown function DUF5104 CLSA_c08270 4fa52efff0e1a092c59307a748022a40 183 Gene3D G3DSA:3.10.450.50 26 171 1.6E-9 T 12-10-2018 CLSA_c07750 9915c40e6ef8141b73f1820854bd32cb 487 Gene3D G3DSA:3.90.100.10 388 482 5.2E-18 T 12-10-2018 CLSA_c07750 9915c40e6ef8141b73f1820854bd32cb 487 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 11 324 8.6E-76 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLSA_c07750 9915c40e6ef8141b73f1820854bd32cb 487 Gene3D G3DSA:3.40.640.10 10 284 2.5E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c07750 9915c40e6ef8141b73f1820854bd32cb 487 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 393 464 1.8E-10 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLSA_c07750 9915c40e6ef8141b73f1820854bd32cb 487 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 224 238 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLSA_c07750 9915c40e6ef8141b73f1820854bd32cb 487 SUPERFAMILY SSF53383 11 388 1.46E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 57 377 3.0E-40 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 Pfam PF11104 Type IV pilus assembly protein PilM; 64 369 2.8E-34 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 Gene3D G3DSA:3.30.420.40 63 381 1.4E-56 T 12-10-2018 CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 PIRSF PIRSF019169 46 400 4.7E-91 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 SUPERFAMILY SSF53067 241 369 7.53E-17 T 12-10-2018 CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 Gene3D G3DSA:3.30.1490.300 136 195 1.4E-56 T 12-10-2018 CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 Gene3D G3DSA:3.30.420.40 239 369 1.4E-56 T 12-10-2018 CLSA_c11510 790f70fa720be4f69f5d190cecda77a1 400 SUPERFAMILY SSF53067 119 219 6.15E-5 T 12-10-2018 CLSA_c17250 0979af3d33fda556d21ef844fcb014d7 186 Gene3D G3DSA:3.40.630.30 12 185 1.2E-11 T 12-10-2018 CLSA_c17250 0979af3d33fda556d21ef844fcb014d7 186 Pfam PF00583 Acetyltransferase (GNAT) family 53 163 7.8E-5 T 12-10-2018 IPR000182 GNAT domain CLSA_c17250 0979af3d33fda556d21ef844fcb014d7 186 SUPERFAMILY SSF55729 21 183 5.41E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 330 2.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 330 346 2.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 Gene3D G3DSA:3.40.50.12740 3 176 1.2E-28 T 12-10-2018 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 Gene3D G3DSA:1.10.10.2730 300 347 5.0E-18 T 12-10-2018 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 SUPERFAMILY SSF52172 1 122 3.42E-30 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 SUPERFAMILY SSF46689 249 297 3.58E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 SMART SM00448 2 117 9.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 SMART SM00342 263 346 1.5E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 Pfam PF12833 Helix-turn-helix domain 269 347 3.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 Pfam PF00072 Response regulator receiver domain 4 117 6.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 Gene3D G3DSA:1.10.10.60 246 299 1.5E-12 T 12-10-2018 CLSA_c36780 cca39a3efe3682d769876badf71ec9d3 350 SUPERFAMILY SSF46689 299 347 4.39E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c33860 49f3f2831e33fef7189cf70a7d957e0a 298 Pfam PF00005 ABC transporter 17 155 1.3E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c33860 49f3f2831e33fef7189cf70a7d957e0a 298 Gene3D G3DSA:3.40.50.300 1 229 5.0E-54 T 12-10-2018 CLSA_c33860 49f3f2831e33fef7189cf70a7d957e0a 298 SMART SM00382 26 203 5.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c33860 49f3f2831e33fef7189cf70a7d957e0a 298 SUPERFAMILY SSF52540 1 222 4.6E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 Gene3D G3DSA:1.20.1440.120 92 225 3.3E-12 T 12-10-2018 CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 SUPERFAMILY SSF50249 7 82 1.61E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 Gene3D G3DSA:3.30.60.100 151 189 3.3E-12 T 12-10-2018 CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 Gene3D G3DSA:2.40.50.140 5 86 2.3E-12 T 12-10-2018 CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 SUPERFAMILY SSF57863 85 231 5.49E-31 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 245 2.8E-61 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 Hamap MF_00201 DNA repair protein RecO [recO]. 5 247 26.462 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 Pfam PF11967 Recombination protein O N terminal 6 82 1.9E-24 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLSA_c11010 905f013a508e11eaf8966003ef333e78 249 Pfam PF02565 Recombination protein O C terminal 88 242 4.9E-36 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 Gene3D G3DSA:1.20.1480.50 147 240 1.7E-8 T 12-10-2018 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 Gene3D G3DSA:1.10.287.130 241 300 5.2E-8 T 12-10-2018 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 SUPERFAMILY SSF47384 218 300 2.35E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 SMART SM00387 346 457 6.6E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 Gene3D G3DSA:3.30.565.10 307 457 5.4E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 SMART SM00388 235 299 1.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 2.6E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 1.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c23390 9abb9b71ec46ebbcf4a3ae7ecd07ad26 457 SUPERFAMILY SSF55874 288 453 2.88E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 PIRSF PIRSF001021 52 556 2.4E-204 T 12-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 SUPERFAMILY SSF51011 467 555 4.89E-28 T 12-10-2018 CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 SUPERFAMILY SSF51445 78 464 3.15E-99 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 Gene3D G3DSA:2.60.40.1180 469 555 4.7E-28 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 Gene3D G3DSA:2.40.30.140 179 280 8.9E-156 T 12-10-2018 CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 SMART SM00642 79 463 2.0E-50 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 Gene3D G3DSA:3.20.20.80 80 445 8.9E-156 T 12-10-2018 CLSA_c28100 c077ac39fbe1c56ac8600e13b22b67ab 556 Pfam PF00128 Alpha amylase, catalytic domain 105 447 3.5E-26 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 6.0E-42 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 PIRSF PIRSF000102 2 315 3.2E-107 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 6.0E-113 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 Gene3D G3DSA:3.40.50.720 2 146 1.5E-53 T 12-10-2018 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 314 3.1E-27 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 6.2E-41 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 6.2E-41 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 6.2E-41 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 6.2E-41 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 6.2E-41 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 315 41.3 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 SUPERFAMILY SSF56327 146 314 7.35E-55 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 Gene3D G3DSA:3.90.110.10 147 315 2.1E-57 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c43720 06539c8bf56108f670128961b4a20167 315 SUPERFAMILY SSF51735 3 147 7.9E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c30160 8b63357042b882adf1a47b8c88f1da68 120 SMART SM00530 3 58 4.3E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30160 8b63357042b882adf1a47b8c88f1da68 120 Gene3D G3DSA:1.10.260.40 2 111 1.7E-13 T 12-10-2018 CLSA_c30160 8b63357042b882adf1a47b8c88f1da68 120 Pfam PF01381 Helix-turn-helix 4 54 1.7E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30160 8b63357042b882adf1a47b8c88f1da68 120 SUPERFAMILY SSF47413 3 55 2.28E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c25720 87d30ad9f135abb7426fbe394f591608 262 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 6 234 3.7E-44 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 CLSA_c25720 87d30ad9f135abb7426fbe394f591608 262 SUPERFAMILY SSF89550 5 257 6.15E-44 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c25720 87d30ad9f135abb7426fbe394f591608 262 Gene3D G3DSA:3.20.20.140 3 259 4.3E-66 T 12-10-2018 CLSA_c25720 87d30ad9f135abb7426fbe394f591608 262 Pfam PF02811 PHP domain 6 193 9.5E-12 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c26170 ce28af945384f5666c7b170827d13206 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 1.8E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLSA_c26170 ce28af945384f5666c7b170827d13206 126 Gene3D G3DSA:3.10.180.10 3 126 1.5E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c26170 ce28af945384f5666c7b170827d13206 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CLSA_c26170 ce28af945384f5666c7b170827d13206 126 SUPERFAMILY SSF54593 4 124 3.36E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 93 110 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 72 87 6.3E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 6.3E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 170 6.3E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 186 6.3E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 6.3E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 Gene3D G3DSA:2.40.100.10 23 220 9.1E-62 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 SUPERFAMILY SSF50891 59 214 5.99E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 58 210 9.5E-54 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c40730 1f232d78c77e58759c9883f9313bfa86 224 PIRSF PIRSF001467 42 215 2.4E-43 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 Pfam PF04616 Glycosyl hydrolases family 43 59 373 4.7E-34 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 SUPERFAMILY SSF75005 48 375 1.04E-57 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 Pfam PF03422 Carbohydrate binding module (family 6) 398 525 2.3E-34 T 12-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 SMART SM00606 390 526 2.3E-42 T 12-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 Gene3D G3DSA:2.60.120.260 388 525 8.9E-43 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 SUPERFAMILY SSF49785 388 524 2.55E-27 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c06900 1c343881f292bb332a6e2d8a3ab06820 526 Gene3D G3DSA:2.115.10.20 51 387 1.1E-111 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 Gene3D G3DSA:3.30.460.10 6 144 2.2E-55 T 12-10-2018 CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 289 437 1.1E-15 T 12-10-2018 IPR032810 CCA-adding enzyme, C-terminal CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 SUPERFAMILY SSF81301 7 142 1.96E-44 T 12-10-2018 CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 SUPERFAMILY SSF81891 143 439 8.5E-55 T 12-10-2018 CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 172 229 8.8E-17 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 Gene3D G3DSA:1.10.3090.10 145 433 1.9E-56 T 12-10-2018 CLSA_c26190 1f281d8e93c80d84999e54990cac9087 445 Pfam PF01743 Poly A polymerase head domain 25 144 4.4E-40 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 SUPERFAMILY SSF52317 2 187 2.72E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 ProSitePatterns PS01236 PdxT/SNO family family signature. 40 50 - T 12-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 Pfam PF01174 SNO glutamine amidotransferase family 5 189 1.3E-62 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 185 1.7E-73 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 186 34.807 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 PIRSF PIRSF005639 1 191 3.5E-72 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44900 6307676d42f1e25dd61b1f82c37397af 198 Gene3D G3DSA:3.40.50.880 1 197 3.7E-70 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 TIGRFAM TIGR00595 priA: primosomal protein N' 220 734 3.4E-199 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 737 23.509 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 Gene3D G3DSA:3.40.50.300 406 626 1.6E-19 T 12-10-2018 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 SUPERFAMILY SSF161187 446 485 9.55E-5 T 12-10-2018 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 Pfam PF00271 Helicase conserved C-terminal domain 492 589 1.2E-10 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 Pfam PF00270 DEAD/DEAH box helicase 201 362 3.6E-16 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 Gene3D G3DSA:1.10.8.630 3 119 8.7E-18 T 12-10-2018 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 SMART SM00490 493 590 3.8E-9 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 Gene3D G3DSA:3.40.50.300 186 378 6.9E-69 T 12-10-2018 CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 SMART SM00487 196 391 1.3E-21 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c13650 7a2ca6b1043175061c5525321217bf17 738 SUPERFAMILY SSF52540 216 599 1.74E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c35910 a40fd4e172ed0a1a9b68a46db9dcd1f8 582 SMART SM00656 206 428 1.3E-12 T 12-10-2018 IPR002022 Pectate lyase CLSA_c35910 a40fd4e172ed0a1a9b68a46db9dcd1f8 582 Pfam PF00544 Pectate lyase 260 422 5.4E-27 T 12-10-2018 IPR002022 Pectate lyase CLSA_c35910 a40fd4e172ed0a1a9b68a46db9dcd1f8 582 SUPERFAMILY SSF51126 207 535 9.7E-57 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c35910 a40fd4e172ed0a1a9b68a46db9dcd1f8 582 Gene3D G3DSA:2.160.20.10 191 535 5.8E-80 T 12-10-2018 IPR012334 Pectin lyase fold CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 SUPERFAMILY SSF55874 275 447 9.17E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 286 2.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 SMART SM00388 214 286 6.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 SUPERFAMILY SSF55785 57 186 5.33E-13 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 193 2.3E-14 T 12-10-2018 IPR000014 PAS domain CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 Gene3D G3DSA:1.10.287.130 189 288 3.9E-21 T 12-10-2018 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 SMART SM00387 332 444 2.4E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 8.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 8.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 8.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 8.9E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 Gene3D G3DSA:3.30.450.20 60 188 5.7E-13 T 12-10-2018 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 441 2.9E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 SUPERFAMILY SSF47384 202 286 2.35E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c28330 3719f4f6dcfb192dd4a4a090e857562e 475 Gene3D G3DSA:3.30.565.10 291 451 1.3E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 Gene3D G3DSA:1.10.460.10 171 600 1.1E-119 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 Pfam PF01131 DNA topoisomerase 161 591 1.9E-97 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 Gene3D G3DSA:2.70.20.10 223 481 1.1E-119 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 SMART SM00437 278 555 3.1E-51 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 SMART SM00436 135 229 6.8E-19 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 3.1E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.1E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 518 532 3.1E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 109 122 3.1E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.1E-19 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 Gene3D G3DSA:3.40.50.140 2 162 8.2E-51 T 12-10-2018 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 Gene3D G3DSA:1.10.290.10 287 410 1.1E-119 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 SMART SM00493 2 135 1.2E-14 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 Pfam PF01751 Toprim domain 4 143 2.2E-15 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c11960 f07ea97b91b09c651de1badb177fc241 718 SUPERFAMILY SSF56712 3 606 2.22E-147 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CLSA_c15000 d101ce82d8983eb33f7c3175a0306f42 183 Gene3D G3DSA:3.40.50.300 1 132 5.7E-9 T 12-10-2018 CLSA_c15000 d101ce82d8983eb33f7c3175a0306f42 183 SUPERFAMILY SSF52540 10 118 4.53E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c15080 c7f2eb1435a7f0df85724c84bc4fcc5c 394 SUPERFAMILY SSF53383 6 391 2.81E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c15080 c7f2eb1435a7f0df85724c84bc4fcc5c 394 Gene3D G3DSA:3.40.640.10 1 263 2.5E-85 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c15080 c7f2eb1435a7f0df85724c84bc4fcc5c 394 PIRSF PIRSF000390 2 393 1.0E-94 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c15080 c7f2eb1435a7f0df85724c84bc4fcc5c 394 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 385 2.6E-99 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c15080 c7f2eb1435a7f0df85724c84bc4fcc5c 394 Gene3D G3DSA:3.90.1150.10 265 393 2.0E-28 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c29090 cfee23dc770069bae716780c0b19225f 543 Pfam PF13401 AAA domain 133 278 2.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c29090 cfee23dc770069bae716780c0b19225f 543 SUPERFAMILY SSF52540 110 372 3.67E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c29090 cfee23dc770069bae716780c0b19225f 543 Gene3D G3DSA:3.40.50.300 109 286 6.2E-6 T 12-10-2018 CLSA_c30870 360ec30890f4dd3199735bd07c7d405d 333 SUPERFAMILY SSF50891 196 310 2.73E-6 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c30870 360ec30890f4dd3199735bd07c7d405d 333 SMART SM00797 24 320 3.0E-125 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CLSA_c30870 360ec30890f4dd3199735bd07c7d405d 333 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 303 2.9E-90 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CLSA_c30870 360ec30890f4dd3199735bd07c7d405d 333 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 328 2.2E-96 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CLSA_c30870 360ec30890f4dd3199735bd07c7d405d 333 Gene3D G3DSA:2.40.100.10 193 331 1.7E-46 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 SUPERFAMILY SSF52540 8 257 1.39E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 Gene3D G3DSA:3.40.50.300 6 331 4.0E-101 T 12-10-2018 CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 304 2.8E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 Pfam PF00005 ABC transporter 35 185 5.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 324 1.2E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLSA_c43990 c4b9d3bade5fa7d878ee7960bc884477 331 SMART SM00382 43 235 2.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c28540 c371d32c0a3defae21b5edd7c6bc24da 370 Gene3D G3DSA:3.40.50.2000 145 363 1.2E-40 T 12-10-2018 CLSA_c28540 c371d32c0a3defae21b5edd7c6bc24da 370 SUPERFAMILY SSF53756 141 369 2.06E-55 T 12-10-2018 CLSA_c28540 c371d32c0a3defae21b5edd7c6bc24da 370 Pfam PF00534 Glycosyl transferases group 1 192 345 9.1E-31 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c28540 c371d32c0a3defae21b5edd7c6bc24da 370 Gene3D G3DSA:3.40.50.2000 188 354 1.2E-40 T 12-10-2018 CLSA_c33640 c7227ed7328ba8fee4a623a97dfd1370 469 Gene3D G3DSA:3.40.309.10 247 423 9.0E-109 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c33640 c7227ed7328ba8fee4a623a97dfd1370 469 Gene3D G3DSA:3.40.605.10 424 469 8.7E-10 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c33640 c7227ed7328ba8fee4a623a97dfd1370 469 Pfam PF00171 Aldehyde dehydrogenase family 39 428 1.1E-33 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c33640 c7227ed7328ba8fee4a623a97dfd1370 469 SUPERFAMILY SSF53720 40 466 6.81E-65 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c33640 c7227ed7328ba8fee4a623a97dfd1370 469 Gene3D G3DSA:3.40.605.10 48 246 9.0E-109 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c33640 c7227ed7328ba8fee4a623a97dfd1370 469 PIRSF PIRSF036410 1 469 6.0E-207 T 12-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CLSA_c33350 ee017a770ae5dc870cd05f623292e410 125 SUPERFAMILY SSF46785 4 123 7.06E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c33350 ee017a770ae5dc870cd05f623292e410 125 PIRSF PIRSF019455 1 125 3.5E-33 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLSA_c33350 ee017a770ae5dc870cd05f623292e410 125 Pfam PF03965 Penicillinase repressor 6 119 3.6E-30 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLSA_c33350 ee017a770ae5dc870cd05f623292e410 125 Gene3D G3DSA:1.10.4040.10 72 123 2.4E-11 T 12-10-2018 CLSA_c33350 ee017a770ae5dc870cd05f623292e410 125 Gene3D G3DSA:1.10.10.10 4 71 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 208 342 8.6E-12 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 383 398 1.9E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 1.9E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 1.9E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Gene3D G3DSA:2.40.420.20 401 476 6.1E-12 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Gene3D G3DSA:2.40.30.170 371 400 6.1E-12 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Gene3D G3DSA:2.40.30.170 293 342 1.5E-13 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Gene3D G3DSA:2.40.50.100 262 292 1.5E-13 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Gene3D G3DSA:2.40.50.100 82 149 5.1E-11 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Pfam PF13533 Biotin-lipoyl like 80 127 1.5E-11 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 Gene3D G3DSA:1.10.287.470 154 232 4.0E-9 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 SUPERFAMILY SSF111369 202 313 8.76E-6 T 12-10-2018 CLSA_c02800 ca8f3bda2347b508f13c6515c9018c6e 479 SUPERFAMILY SSF111369 71 176 1.01E-7 T 12-10-2018 CLSA_c35850 423492b71961fd05d892117c36502923 369 Gene3D G3DSA:3.60.60.10 92 355 4.7E-42 T 12-10-2018 CLSA_c35850 423492b71961fd05d892117c36502923 369 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 106 334 4.5E-40 T 12-10-2018 IPR005079 Peptidase C45 CLSA_c35850 423492b71961fd05d892117c36502923 369 SUPERFAMILY SSF56235 104 242 1.08E-11 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 Gene3D G3DSA:3.30.230.10 526 763 3.4E-80 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 634 740 5.3E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 Pfam PF13654 AAA domain 35 520 1.3E-109 T 12-10-2018 CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 SUPERFAMILY SSF54211 548 739 7.97E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 661 680 3.8E-5 T 12-10-2018 CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 631 650 3.8E-5 T 12-10-2018 CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 Gene3D G3DSA:3.40.50.300 32 162 5.9E-7 T 12-10-2018 CLSA_c10650 195336a6d87c5cb1a09c474d7c956e91 769 Gene3D G3DSA:3.40.50.300 238 440 2.6E-46 T 12-10-2018 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 4.5E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 Pfam PF00072 Response regulator receiver domain 9 118 4.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 SMART SM00448 7 118 2.5E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 SUPERFAMILY SSF46894 136 234 3.12E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 Gene3D G3DSA:3.40.50.2300 2 126 4.6E-30 T 12-10-2018 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 SUPERFAMILY SSF52172 4 127 8.4E-34 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 SMART SM00862 157 233 5.2E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c21260 4d8ae2bad58b6ff73d1b44f61aca34e7 237 Gene3D G3DSA:1.10.10.10 133 236 2.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 ProSitePatterns PS01300 RecR protein signature. 59 80 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 Pfam PF13662 Toprim domain 83 172 3.8E-24 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.302 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 SUPERFAMILY SSF111304 5 199 1.14E-76 T 12-10-2018 IPR023627 Recombination protein RecR CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 Gene3D G3DSA:3.40.1360.10 79 199 2.8E-49 T 12-10-2018 CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 TIGRFAM TIGR00615 recR: recombination protein RecR 5 197 6.9E-82 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 SMART SM00493 82 166 5.1E-16 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 Pfam PF02132 RecR protein 41 80 6.8E-18 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CLSA_c44080 90ae4e1d72dd36036582ec5d330996db 199 Gene3D G3DSA:1.10.8.420 1 54 1.0E-19 T 12-10-2018 CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 SUPERFAMILY SSF52540 71 354 3.37E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Pfam PF00270 DEAD/DEAH box helicase 28 192 4.9E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Gene3D G3DSA:3.30.70.330 405 480 4.1E-28 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Pfam PF03880 DbpA RNA binding domain 407 476 5.1E-23 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 479 68.116 T 12-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 SMART SM00490 255 336 5.3E-35 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Gene3D G3DSA:3.40.50.300 3 208 6.2E-71 T 12-10-2018 CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 SMART SM00487 22 219 8.9E-61 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Gene3D G3DSA:3.40.50.300 211 399 8.2E-49 T 12-10-2018 CLSA_c17630 37166fc8da71690b49f699e514fa09a5 480 Pfam PF00271 Helicase conserved C-terminal domain 228 336 1.8E-30 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c27240 bdc9e0da0fd77ece9bd1e506530606b4 226 Gene3D G3DSA:3.20.20.10 1 225 1.6E-75 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c27240 bdc9e0da0fd77ece9bd1e506530606b4 226 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 12 216 3.9E-61 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CLSA_c27240 bdc9e0da0fd77ece9bd1e506530606b4 226 SUPERFAMILY SSF51419 1 214 2.29E-70 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c27240 bdc9e0da0fd77ece9bd1e506530606b4 226 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 215 28.448 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CLSA_c27240 bdc9e0da0fd77ece9bd1e506530606b4 226 Pfam PF01168 Alanine racemase, N-terminal domain 3 216 2.5E-25 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLSA_c27240 bdc9e0da0fd77ece9bd1e506530606b4 226 PIRSF PIRSF004848 1 221 2.8E-73 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CLSA_c00560 a762b20668dc7068efd1c89c0b07fe7b 238 Pfam PF04029 2-phosphosulpholactate phosphatase 10 232 9.0E-82 T 12-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLSA_c00560 a762b20668dc7068efd1c89c0b07fe7b 238 Gene3D G3DSA:3.90.1560.10 1 236 3.8E-84 T 12-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLSA_c00560 a762b20668dc7068efd1c89c0b07fe7b 238 SUPERFAMILY SSF142823 2 235 3.53E-76 T 12-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLSA_c00560 a762b20668dc7068efd1c89c0b07fe7b 238 Hamap MF_00490 2-phosphosulfolactate phosphatase [comB]. 5 238 29.726 T 12-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLSA_c31570 3d73f21fe8c980b35cae22fd58f85f03 237 Gene3D G3DSA:3.40.630.30 102 226 5.0E-19 T 12-10-2018 CLSA_c31570 3d73f21fe8c980b35cae22fd58f85f03 237 Pfam PF13673 Acetyltransferase (GNAT) domain 137 230 1.7E-8 T 12-10-2018 IPR000182 GNAT domain CLSA_c31570 3d73f21fe8c980b35cae22fd58f85f03 237 SUPERFAMILY SSF55729 115 227 3.49E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c35320 8456776451e511870774179f3699c4e3 207 Gene3D G3DSA:1.10.357.10 8 197 5.9E-28 T 12-10-2018 CLSA_c35320 8456776451e511870774179f3699c4e3 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 8.0E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c35320 8456776451e511870774179f3699c4e3 207 SUPERFAMILY SSF46689 8 74 2.34E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c35320 8456776451e511870774179f3699c4e3 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 9.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c35320 8456776451e511870774179f3699c4e3 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 9.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 619 2.4E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 2.1E-13 T 12-10-2018 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 404 2.1E-13 T 12-10-2018 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 538 2.1E-13 T 12-10-2018 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 Gene3D G3DSA:3.40.50.720 384 653 3.1E-51 T 12-10-2018 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 SUPERFAMILY SSF51971 340 549 1.41E-32 T 12-10-2018 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 337 1.8E-79 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 Gene3D G3DSA:3.20.20.70 1 381 3.4E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 SUPERFAMILY SSF51395 3 353 3.05E-106 T 12-10-2018 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 SUPERFAMILY SSF51905 517 638 9.07E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 Gene3D G3DSA:3.50.50.60 480 611 3.1E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 516 540 8.5E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 573 589 8.5E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c06990 76ef5bd01738629d11cba464ee931916 666 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 384 406 8.5E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 7.9E-40 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 PIRSF PIRSF002161 1 179 4.4E-69 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.913 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 Gene3D G3DSA:3.30.1440.10 1 179 2.1E-80 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 SUPERFAMILY SSF55282 3 178 4.94E-77 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02140 5638846c0ebbb61285318ae17b95ee51 179 Pfam PF00281 Ribosomal protein L5 24 80 2.1E-29 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Pfam PF13375 RnfC Barrel sandwich hybrid domain 4 102 3.9E-35 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Gene3D G3DSA:3.30.70.20 360 436 5.5E-10 T 12-10-2018 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Pfam PF13237 4Fe-4S dicluster domain 362 416 3.6E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c05570 13e24115279997f708ea57272509fbc5 439 SUPERFAMILY SSF46548 321 430 1.7E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 405 416 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c05570 13e24115279997f708ea57272509fbc5 439 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 431 8.3E-177 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Gene3D G3DSA:3.40.50.11540 133 280 1.7E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Pfam PF10531 SLBB domain 286 334 1.2E-13 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 439 158.367 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 SUPERFAMILY SSF142019 85 292 1.05E-63 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c05570 13e24115279997f708ea57272509fbc5 439 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 128 272 4.5E-53 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c41260 428b434d3b894d9214918d634721808f 405 Gene3D G3DSA:3.40.50.2000 207 392 7.4E-19 T 12-10-2018 CLSA_c41260 428b434d3b894d9214918d634721808f 405 Pfam PF13692 Glycosyl transferases group 1 230 367 1.4E-10 T 12-10-2018 CLSA_c41260 428b434d3b894d9214918d634721808f 405 Gene3D G3DSA:3.40.50.2000 1 206 3.4E-16 T 12-10-2018 CLSA_c41260 428b434d3b894d9214918d634721808f 405 Pfam PF13439 Glycosyltransferase Family 4 15 202 1.5E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c41260 428b434d3b894d9214918d634721808f 405 SUPERFAMILY SSF53756 3 404 2.2E-37 T 12-10-2018 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 SMART SM00487 284 502 6.0E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 Pfam PF11867 Domain of unknown function (DUF3387) 777 1052 5.8E-13 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 229 2.5E-32 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 Gene3D G3DSA:3.40.50.300 490 738 4.4E-35 T 12-10-2018 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 Pfam PF04851 Type III restriction enzyme, res subunit 289 471 2.1E-19 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 Gene3D G3DSA:3.40.50.300 288 489 3.1E-54 T 12-10-2018 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 SUPERFAMILY SSF52540 432 723 1.24E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 SUPERFAMILY SSF52540 246 518 2.75E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 37 737 3.8E-153 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CLSA_c29340 e6bea93f6477b7feb42aa5bd1cbbd29d 1064 Gene3D G3DSA:3.90.1570.50 88 283 4.9E-19 T 12-10-2018 CLSA_c03900 83d425261215c02770549962c9e29833 203 Pfam PF01725 Ham1 family 4 197 3.6E-55 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CLSA_c03900 83d425261215c02770549962c9e29833 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 198 1.5E-52 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CLSA_c03900 83d425261215c02770549962c9e29833 203 SUPERFAMILY SSF52972 1 200 2.41E-64 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CLSA_c03900 83d425261215c02770549962c9e29833 203 Gene3D G3DSA:3.90.950.10 1 203 5.1E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CLSA_c03900 83d425261215c02770549962c9e29833 203 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 201 44.41 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 CLSA_c04520 b17946115c275e9030dac9babb77b7f9 571 Gene3D G3DSA:3.30.565.60 249 405 1.3E-19 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily CLSA_c04520 b17946115c275e9030dac9babb77b7f9 571 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 327 399 1.6E-10 T 12-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain CLSA_c04520 b17946115c275e9030dac9babb77b7f9 571 Gene3D G3DSA:3.30.950.30 3 147 1.6E-32 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily CLSA_c04520 b17946115c275e9030dac9babb77b7f9 571 Pfam PF04326 Putative DNA-binding domain 14 137 1.3E-12 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 CLSA_c04520 b17946115c275e9030dac9babb77b7f9 571 SUPERFAMILY SSF46785 507 559 2.41E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c28570 851843d17654329973eed6b25c194fac 354 Pfam PF00534 Glycosyl transferases group 1 173 317 1.5E-20 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c28570 851843d17654329973eed6b25c194fac 354 Gene3D G3DSA:3.40.50.2000 15 163 1.6E-8 T 12-10-2018 CLSA_c28570 851843d17654329973eed6b25c194fac 354 Gene3D G3DSA:3.40.50.2000 168 341 1.9E-25 T 12-10-2018 CLSA_c28570 851843d17654329973eed6b25c194fac 354 SUPERFAMILY SSF53756 37 349 5.76E-44 T 12-10-2018 CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 2.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 SUPERFAMILY SSF46785 6 142 3.88E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 Pfam PF01047 MarR family 33 90 1.6E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 Gene3D G3DSA:1.10.10.10 3 143 5.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37500 06cb7317748dc01f441b3809296ce254 144 SMART SM00347 26 126 2.8E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c24340 4768b68867b17efe6be30e2f6082d5ad 259 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 11 253 7.7E-98 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CLSA_c24340 4768b68867b17efe6be30e2f6082d5ad 259 SUPERFAMILY SSF53167 10 254 4.45E-75 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CLSA_c24340 4768b68867b17efe6be30e2f6082d5ad 259 Gene3D G3DSA:3.40.50.1580 7 259 3.5E-87 T 12-10-2018 CLSA_c24340 4768b68867b17efe6be30e2f6082d5ad 259 Pfam PF01048 Phosphorylase superfamily 23 237 1.0E-40 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLSA_c24340 4768b68867b17efe6be30e2f6082d5ad 259 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 69 84 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c40600 627f6073a74781a5b1e62511a826a147 292 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 126 2.3E-26 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLSA_c40600 627f6073a74781a5b1e62511a826a147 292 SUPERFAMILY SSF111331 1 289 1.44E-71 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CLSA_c40600 627f6073a74781a5b1e62511a826a147 292 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 283 2.8E-60 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase CLSA_c40600 627f6073a74781a5b1e62511a826a147 292 Gene3D G3DSA:3.40.50.10330 1 127 5.1E-28 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CLSA_c40600 627f6073a74781a5b1e62511a826a147 292 Gene3D G3DSA:2.60.200.40 128 283 1.3E-40 T 12-10-2018 CLSA_c40600 627f6073a74781a5b1e62511a826a147 292 SMART SM00046 3 130 2.4E-4 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 1.5E-44 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 1.5E-44 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 1.5E-44 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 1.5E-44 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 1.5E-44 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 1.5E-44 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 311 1.8E-107 T 12-10-2018 IPR017861 Kae1/TsaD family CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 Gene3D G3DSA:3.30.420.40 132 298 3.8E-125 T 12-10-2018 CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 336 62.87 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 318 1.1E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 Gene3D G3DSA:3.30.420.40 6 320 3.8E-125 T 12-10-2018 CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 Pfam PF00814 Glycoprotease family 26 311 3.0E-99 T 12-10-2018 IPR000905 Gcp-like domain CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 SUPERFAMILY SSF53067 5 125 8.42E-29 T 12-10-2018 CLSA_c04730 0da1a169712ad70359c25b5483937d01 339 SUPERFAMILY SSF53067 106 316 2.51E-44 T 12-10-2018 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 Gene3D G3DSA:3.30.2130.30 7 245 6.9E-118 T 12-10-2018 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 Pfam PF02926 THUMP domain 23 154 9.8E-8 T 12-10-2018 IPR004114 THUMP domain GO:0003723 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 SMART SM00981 57 154 8.2E-8 T 12-10-2018 IPR004114 THUMP domain GO:0003723 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 2.6E-5 T 12-10-2018 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 2.6E-5 T 12-10-2018 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 Gene3D G3DSA:3.40.50.150 160 364 6.9E-118 T 12-10-2018 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 298 304 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 SUPERFAMILY SSF53335 143 371 8.44E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c27170 1e6d0747de2d403f633f54018a7b1826 387 Pfam PF01170 Putative RNA methylase family UPF0020 162 366 2.5E-55 T 12-10-2018 IPR000241 Putative RNA methylase domain CLSA_c34670 31d8dadf132183673c5f74230dcc07c2 166 SUPERFAMILY SSF55729 1 155 1.21E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c34670 31d8dadf132183673c5f74230dcc07c2 166 Gene3D G3DSA:3.40.630.30 1 162 1.3E-27 T 12-10-2018 CLSA_c34670 31d8dadf132183673c5f74230dcc07c2 166 Pfam PF13302 Acetyltransferase (GNAT) domain 66 152 3.4E-19 T 12-10-2018 IPR000182 GNAT domain CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 552 1.8E-232 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 SUPERFAMILY SSF52016 372 551 5.18E-63 T 12-10-2018 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 552 46.047 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 Gene3D G3DSA:3.50.30.80 372 523 1.6E-58 T 12-10-2018 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 SUPERFAMILY SSF143975 2 371 7.72E-136 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 460 471 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLSA_c02720 7dd8bfe3ccb097eca7f60ec511520147 552 Pfam PF00920 Dehydratase family 31 549 5.9E-224 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLSA_c40610 fcee994e103bebb4463d833dc0cbfa59 173 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 11 169 4.7E-36 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CLSA_c40610 fcee994e103bebb4463d833dc0cbfa59 173 Gene3D G3DSA:1.20.120.1760 1 170 3.4E-14 T 12-10-2018 CLSA_c40610 fcee994e103bebb4463d833dc0cbfa59 173 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 69 3.1E-14 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLSA_c40610 fcee994e103bebb4463d833dc0cbfa59 173 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLSA_c10990 42bb46f1256566a7ffa90913ac577fef 233 SMART SM00014 134 228 9.8E-8 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c10990 42bb46f1256566a7ffa90913ac577fef 233 Gene3D G3DSA:1.10.3830.10 1 117 2.7E-34 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CLSA_c10990 42bb46f1256566a7ffa90913ac577fef 233 Pfam PF01569 PAP2 superfamily 157 230 3.0E-9 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c10990 42bb46f1256566a7ffa90913ac577fef 233 Gene3D G3DSA:1.20.144.10 155 233 2.0E-10 T 12-10-2018 CLSA_c10990 42bb46f1256566a7ffa90913ac577fef 233 SUPERFAMILY SSF48317 48 232 4.45E-19 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLSA_c10990 42bb46f1256566a7ffa90913ac577fef 233 Pfam PF01219 Prokaryotic diacylglycerol kinase 12 112 6.6E-32 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Gene3D G3DSA:2.30.40.20 12 71 4.9E-31 T 12-10-2018 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Gene3D G3DSA:1.10.150.20 165 225 1.4E-8 T 12-10-2018 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Hamap MF_01113 DNA polymerase IV [dinB]. 2 347 36.95 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Gene3D G3DSA:3.30.70.270 72 163 1.4E-28 T 12-10-2018 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 SUPERFAMILY SSF100879 236 335 6.75E-26 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 341 7.1E-18 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Pfam PF00817 impB/mucB/samB family 8 152 1.8E-49 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 SUPERFAMILY SSF56672 2 232 3.02E-86 T 12-10-2018 CLSA_c39080 d133e56db5e8bf17e102f0f930f08c7c 348 Gene3D G3DSA:3.30.1490.100 238 344 4.9E-29 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLSA_c26380 05c67410aa55fb9802ab53294f50871d 267 PIRSF PIRSF004846 1 267 3.5E-80 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CLSA_c26380 05c67410aa55fb9802ab53294f50871d 267 SUPERFAMILY SSF53850 43 264 2.21E-65 T 12-10-2018 CLSA_c26380 05c67410aa55fb9802ab53294f50871d 267 Gene3D G3DSA:3.40.190.10 122 227 1.2E-82 T 12-10-2018 CLSA_c26380 05c67410aa55fb9802ab53294f50871d 267 Pfam PF13531 Bacterial extracellular solute-binding protein 43 264 1.0E-46 T 12-10-2018 CLSA_c26380 05c67410aa55fb9802ab53294f50871d 267 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 48 263 1.8E-68 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CLSA_c26380 05c67410aa55fb9802ab53294f50871d 267 Gene3D G3DSA:3.40.190.10 45 264 1.2E-82 T 12-10-2018 CLSA_c17150 d5eddfd5ba814b60068c5c2e0e61dc65 151 Pfam PF02001 Protein of unknown function DUF134 2 96 1.3E-22 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 CLSA_c17150 d5eddfd5ba814b60068c5c2e0e61dc65 151 SUPERFAMILY SSF88659 37 82 1.05E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c17150 d5eddfd5ba814b60068c5c2e0e61dc65 151 Gene3D G3DSA:1.10.10.10 33 83 3.9E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17150 d5eddfd5ba814b60068c5c2e0e61dc65 151 Hamap MF_00674 UPF0251 protein . 2 98 24.464 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF04563 RNA polymerase beta subunit 26 475 2.6E-28 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1160 12.414 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 294 1.0E-25 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF04561 RNA polymerase Rpb2, domain 2 360 430 5.4E-5 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 213 909 4.0E-295 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:2.40.50.100 694 767 4.7E-25 T 12-10-2018 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF04560 RNA polymerase Rpb2, domain 7 1084 1158 2.6E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF00562 RNA polymerase Rpb2, domain 6 696 1082 2.3E-163 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:2.40.270.10 996 1060 2.8E-26 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:3.90.1100.10 18 154 4.2E-50 T 12-10-2018 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:3.90.1100.10 415 615 2.3E-76 T 12-10-2018 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:3.90.1110.10 155 260 1.6E-7 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:3.90.1100.10 624 691 2.1E-19 T 12-10-2018 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 SUPERFAMILY SSF64484 12 1166 0.0 T 12-10-2018 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:2.40.50.150 799 943 1.6E-61 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Gene3D G3DSA:3.90.1800.10 1070 1122 2.6E-10 T 12-10-2018 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF10385 RNA polymerase beta subunit external 1 domain 567 634 1.5E-19 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 Pfam PF04565 RNA polymerase Rpb2, domain 3 489 557 2.8E-31 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c01940 603e611e340f350924b9d45ece0c2dbe 1235 ProSitePatterns PS01166 RNA polymerases beta chain signature. 935 947 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 Gene3D G3DSA:3.40.710.10 25 288 2.8E-89 T 12-10-2018 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.2E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.2E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 1.2E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 SUPERFAMILY SSF56601 11 289 4.58E-81 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 378 3.3E-13 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 SMART SM00936 289 378 3.9E-15 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 Gene3D G3DSA:2.60.410.10 289 378 4.1E-8 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 SUPERFAMILY SSF69189 281 376 5.89E-8 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c26360 34b99289dd220e1fd09dbebfa01879c1 397 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 269 1.1E-74 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 Gene3D G3DSA:1.10.1380.10 79 478 8.1E-180 T 12-10-2018 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 522 538 2.6E-14 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 593 604 2.6E-14 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 513 2.6E-14 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 2.6E-14 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 Gene3D G3DSA:3.40.390.10 52 685 8.1E-180 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 SUPERFAMILY SSF55486 49 685 6.11E-156 T 12-10-2018 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 Pfam PF01431 Peptidase family M13 491 682 4.2E-53 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c44040 7ac0c16bc964501ccb1cc381466df449 685 Pfam PF05649 Peptidase family M13 54 435 4.1E-72 T 12-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 CLSA_c43870 41bf088c7892b06c112d722f3d94369c 171 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 86 98 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c43870 41bf088c7892b06c112d722f3d94369c 171 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 23 147 1.5E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c43870 41bf088c7892b06c112d722f3d94369c 171 Gene3D G3DSA:2.70.70.10 10 171 4.4E-57 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c43870 41bf088c7892b06c112d722f3d94369c 171 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 24 144 1.7E-44 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c43870 41bf088c7892b06c112d722f3d94369c 171 SUPERFAMILY SSF51261 15 167 1.92E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 Gene3D G3DSA:3.90.1260.10 176 405 7.6E-92 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 396 4.5E-146 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 Pfam PF00764 Arginosuccinate synthase 8 393 2.3E-150 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 Gene3D G3DSA:3.40.50.620 5 174 1.1E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 SUPERFAMILY SSF52402 5 167 9.31E-47 T 12-10-2018 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 52.838 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLSA_c07200 5ed60f83038275153d533ea5accb8f6e 407 SUPERFAMILY SSF69864 174 401 8.24E-87 T 12-10-2018 CLSA_c28460 b5065a38ae0e8e83cd39115b0013b3fe 249 Pfam PF02706 Chain length determinant protein 6 94 7.5E-11 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CLSA_c37450 34f849a98aaac7c81273821fbc3c83c2 325 Pfam PF00704 Glycosyl hydrolases family 18 20 308 5.7E-72 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CLSA_c37450 34f849a98aaac7c81273821fbc3c83c2 325 Gene3D G3DSA:3.10.50.10 226 277 3.7E-6 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily CLSA_c37450 34f849a98aaac7c81273821fbc3c83c2 325 SUPERFAMILY SSF54556 232 279 1.5E-9 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily CLSA_c37450 34f849a98aaac7c81273821fbc3c83c2 325 ProSitePatterns PS01095 Chitinases family 18 active site. 110 118 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CLSA_c37450 34f849a98aaac7c81273821fbc3c83c2 325 SMART SM00636 16 308 2.8E-79 T 12-10-2018 IPR011583 Chitinase II GO:0008061 CLSA_c37450 34f849a98aaac7c81273821fbc3c83c2 325 SUPERFAMILY SSF51445 13 312 2.85E-71 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c31310 5873287d3151fd7c90aff6f565c0ac74 206 Pfam PF00117 Glutamine amidotransferase class-I 4 201 9.6E-22 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c31310 5873287d3151fd7c90aff6f565c0ac74 206 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 35.552 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLSA_c31310 5873287d3151fd7c90aff6f565c0ac74 206 Gene3D G3DSA:3.40.50.880 1 205 1.7E-71 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c31310 5873287d3151fd7c90aff6f565c0ac74 206 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 3.1E-72 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLSA_c31310 5873287d3151fd7c90aff6f565c0ac74 206 PIRSF PIRSF000495 1 206 3.1E-72 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLSA_c31310 5873287d3151fd7c90aff6f565c0ac74 206 SUPERFAMILY SSF52317 2 204 6.95E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c41210 450aeb13cf4f1dc20b76ae67a599d8d5 180 Pfam PF07155 ECF-type riboflavin transporter, S component 9 172 8.2E-39 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLSA_c41210 450aeb13cf4f1dc20b76ae67a599d8d5 180 Gene3D G3DSA:1.10.1760.20 5 180 2.7E-41 T 12-10-2018 CLSA_c11950 c3a53a32cc1e02a4c6bf5027fdbbe0df 166 Gene3D G3DSA:1.20.1260.100 9 165 8.5E-41 T 12-10-2018 IPR038330 TspO/MBR-related superfamily CLSA_c11950 c3a53a32cc1e02a4c6bf5027fdbbe0df 166 Pfam PF03073 TspO/MBR family 17 162 5.2E-37 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 CLSA_c11950 c3a53a32cc1e02a4c6bf5027fdbbe0df 166 PIRSF PIRSF005859 4 165 6.3E-42 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 CLSA_c37760 fc52f2f2b9b07199c54230d9226d7a2f 557 Pfam PF03321 GH3 auxin-responsive promoter 22 546 2.0E-159 T 12-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 CLSA_c10820 07b447db1426c1486be625de0b3215da 390 Pfam PF06969 HemN C-terminal domain 316 377 2.9E-12 T 12-10-2018 IPR010723 HemN, C-terminal CLSA_c10820 07b447db1426c1486be625de0b3215da 390 SMART SM00729 18 234 1.1E-59 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c10820 07b447db1426c1486be625de0b3215da 390 Gene3D G3DSA:3.80.30.20 3 309 6.0E-106 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c10820 07b447db1426c1486be625de0b3215da 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 20 367 1.3E-99 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 CLSA_c10820 07b447db1426c1486be625de0b3215da 390 Pfam PF04055 Radical SAM superfamily 23 189 3.2E-25 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c10820 07b447db1426c1486be625de0b3215da 390 SUPERFAMILY SSF102114 12 388 8.89E-117 T 12-10-2018 CLSA_c11620 3cbdcb93c870c84aacaebf3c8382b60f 188 PIRSF PIRSF036382 1 188 1.5E-49 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator CLSA_c11620 3cbdcb93c870c84aacaebf3c8382b60f 188 SUPERFAMILY SSF52172 6 184 3.62E-33 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c11620 3cbdcb93c870c84aacaebf3c8382b60f 188 Gene3D G3DSA:1.10.10.10 136 188 2.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c11620 3cbdcb93c870c84aacaebf3c8382b60f 188 SMART SM01012 129 184 8.7E-21 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 CLSA_c11620 3cbdcb93c870c84aacaebf3c8382b60f 188 Gene3D G3DSA:3.40.50.2300 2 135 1.2E-6 T 12-10-2018 CLSA_c11620 3cbdcb93c870c84aacaebf3c8382b60f 188 Pfam PF03861 ANTAR domain 131 183 3.2E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 Gene3D G3DSA:1.20.1720.10 20 256 3.1E-35 T 12-10-2018 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 209 227 1.4E-9 T 12-10-2018 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 1.4E-9 T 12-10-2018 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 1.4E-9 T 12-10-2018 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 1.4E-9 T 12-10-2018 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 83 105 1.4E-9 T 12-10-2018 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 432 5.1E-97 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 Pfam PF07690 Major Facilitator Superfamily 24 413 3.3E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 SUPERFAMILY SSF103473 19 474 1.01E-59 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c37530 df941f1ca95d9395a3103822fb6298aa 481 Gene3D G3DSA:1.20.1250.20 263 478 7.0E-20 T 12-10-2018 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 SUPERFAMILY SSF103190 74 187 3.88E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 Gene3D G3DSA:3.30.450.20 181 292 7.6E-8 T 12-10-2018 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 SUPERFAMILY SSF58104 339 672 1.7E-65 T 12-10-2018 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 Pfam PF00672 HAMP domain 318 364 1.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 625 9.6E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 Pfam PF17203 Single cache domain 3 192 292 1.6E-8 T 12-10-2018 IPR033463 Single cache domain 3 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 SUPERFAMILY SSF103190 187 292 4.32E-16 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 Gene3D G3DSA:1.10.8.500 315 366 8.8E-10 T 12-10-2018 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 Gene3D G3DSA:1.10.287.950 367 672 2.1E-63 T 12-10-2018 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 SMART SM00283 397 672 7.4E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c17910 331a488a81b77f85bbbd69c99dab32ec 673 SMART SM00304 316 368 2.3E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c06770 5068b021094b1c3027a14d7576e16b5b 392 Gene3D G3DSA:1.20.1250.20 185 381 4.3E-28 T 12-10-2018 CLSA_c06770 5068b021094b1c3027a14d7576e16b5b 392 Pfam PF12832 MFS_1 like family 10 334 3.7E-21 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain CLSA_c06770 5068b021094b1c3027a14d7576e16b5b 392 Gene3D G3DSA:1.20.1250.20 2 184 1.9E-21 T 12-10-2018 CLSA_c06770 5068b021094b1c3027a14d7576e16b5b 392 SUPERFAMILY SSF103473 4 382 1.05E-35 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c41030 12b4b4609f9dd13ad24241433252b0db 313 SUPERFAMILY SSF58104 31 312 3.27E-53 T 12-10-2018 CLSA_c41030 12b4b4609f9dd13ad24241433252b0db 313 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 132 279 7.1E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c41030 12b4b4609f9dd13ad24241433252b0db 313 Gene3D G3DSA:1.10.287.950 18 313 9.1E-52 T 12-10-2018 CLSA_c41030 12b4b4609f9dd13ad24241433252b0db 313 SMART SM00283 52 313 5.5E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c06230 9229b89e254a0773057cdb41ac192f11 695 Pfam PF03413 Peptidase propeptide and YPEB domain 377 453 0.0021 T 12-10-2018 IPR025711 PepSY domain CLSA_c06230 9229b89e254a0773057cdb41ac192f11 695 Pfam PF03413 Peptidase propeptide and YPEB domain 306 364 0.0023 T 12-10-2018 IPR025711 PepSY domain CLSA_c06230 9229b89e254a0773057cdb41ac192f11 695 Pfam PF00395 S-layer homology domain 639 676 4.3E-4 T 12-10-2018 IPR001119 S-layer homology domain CLSA_c29870 7396a677771a1f5197a8533b5a2ee2d6 349 Pfam PF17482 Phage tail sheath C-terminal domain 227 347 8.0E-12 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain CLSA_c29870 7396a677771a1f5197a8533b5a2ee2d6 349 Gene3D G3DSA:1.10.10.2290 140 215 9.2E-33 T 12-10-2018 CLSA_c29870 7396a677771a1f5197a8533b5a2ee2d6 349 Gene3D G3DSA:3.40.50.11790 82 245 9.2E-33 T 12-10-2018 CLSA_c29870 7396a677771a1f5197a8533b5a2ee2d6 349 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 77 216 4.3E-8 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain CLSA_c17850 f3d43f38204227447c220b96973a540e 279 SMART SM01061 1 59 9.7E-26 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 Gene3D G3DSA:1.10.1790.10 64 167 1.1E-37 T 12-10-2018 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 Gene3D G3DSA:2.30.24.10 1 55 4.6E-20 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 Gene3D G3DSA:1.10.1790.10 169 278 8.2E-38 T 12-10-2018 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 SUPERFAMILY SSF63520 171 274 5.36E-28 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 Pfam PF00874 PRD domain 181 273 1.5E-17 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 Pfam PF00874 PRD domain 76 163 5.1E-23 T 12-10-2018 IPR011608 PRD domain GO:0006355 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 SUPERFAMILY SSF63520 58 167 4.71E-31 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 SUPERFAMILY SSF50151 1 54 5.75E-17 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 CLSA_c17850 f3d43f38204227447c220b96973a540e 279 Pfam PF03123 CAT RNA binding domain 1 55 4.7E-21 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 Gene3D G3DSA:3.50.50.60 281 464 1.8E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 Gene3D G3DSA:3.50.50.60 141 280 1.4E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 SUPERFAMILY SSF46548 7 151 3.66E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 17 461 1.9E-171 T 12-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 SUPERFAMILY SSF51971 141 394 1.24E-64 T 12-10-2018 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 2.4E-19 T 12-10-2018 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 PRINTS PR00419 Adrenodoxin reductase family signature 285 299 2.4E-19 T 12-10-2018 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 PRINTS PR00419 Adrenodoxin reductase family signature 209 219 2.4E-19 T 12-10-2018 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 2.4E-19 T 12-10-2018 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 PRINTS PR00419 Adrenodoxin reductase family signature 318 331 2.4E-19 T 12-10-2018 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 143 449 4.7E-30 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 Gene3D G3DSA:1.10.1060.10 6 140 7.7E-41 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c40740 26a07eec2c8794869ac3d0afe2da1752 464 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 130 1.6E-42 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLSA_c21120 8650b77e6ff0b8c7cfc86ddb483ec942 273 SMART SM00382 32 231 4.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c21120 8650b77e6ff0b8c7cfc86ddb483ec942 273 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c21120 8650b77e6ff0b8c7cfc86ddb483ec942 273 SUPERFAMILY SSF52540 6 253 1.28E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21120 8650b77e6ff0b8c7cfc86ddb483ec942 273 Pfam PF00005 ABC transporter 23 182 2.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c21120 8650b77e6ff0b8c7cfc86ddb483ec942 273 Gene3D G3DSA:3.40.50.300 4 272 1.9E-76 T 12-10-2018 CLSA_c27110 a3132f527a040eca3685859798fbed93 276 SMART SM00062 46 272 2.4E-27 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c27110 a3132f527a040eca3685859798fbed93 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 264 2.0E-45 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c27110 a3132f527a040eca3685859798fbed93 276 Gene3D G3DSA:3.40.190.10 52 265 4.1E-43 T 12-10-2018 CLSA_c27110 a3132f527a040eca3685859798fbed93 276 Gene3D G3DSA:3.40.190.10 133 231 4.1E-43 T 12-10-2018 CLSA_c27110 a3132f527a040eca3685859798fbed93 276 SUPERFAMILY SSF53850 1 264 2.97E-43 T 12-10-2018 CLSA_c04780 68818c8144ad25f2bfd048b36c739ae4 375 SUPERFAMILY SSF53756 1 372 3.77E-72 T 12-10-2018 CLSA_c04780 68818c8144ad25f2bfd048b36c739ae4 375 Gene3D G3DSA:3.40.50.2000 170 351 1.1E-51 T 12-10-2018 CLSA_c04780 68818c8144ad25f2bfd048b36c739ae4 375 Pfam PF00534 Glycosyl transferases group 1 187 348 1.7E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c04780 68818c8144ad25f2bfd048b36c739ae4 375 Gene3D G3DSA:3.40.50.2000 99 367 1.1E-51 T 12-10-2018 CLSA_c38430 f5f1f4bc425692e17d7f0d306c124945 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.9E-31 T 12-10-2018 IPR002178 PTS EIIA type-2 domain CLSA_c38430 f5f1f4bc425692e17d7f0d306c124945 147 SUPERFAMILY SSF55804 1 145 1.16E-37 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c38430 f5f1f4bc425692e17d7f0d306c124945 147 Gene3D G3DSA:3.40.930.10 1 147 5.3E-47 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 SUPERFAMILY SSF51395 10 320 4.94E-93 T 12-10-2018 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 Gene3D G3DSA:1.10.1200.80 252 321 1.1E-17 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 314 1.6E-94 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 Gene3D G3DSA:3.20.20.70 7 251 5.9E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 2.6E-115 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLSA_c01410 8a1392a195d1be71e811cfe4d5e606fc 321 PIRSF PIRSF006621 1 321 1.6E-107 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLSA_c37930 4d0c924fbb00d3883f3c4632028dd737 488 Gene3D G3DSA:3.40.605.10 16 478 1.6E-160 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c37930 4d0c924fbb00d3883f3c4632028dd737 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CLSA_c37930 4d0c924fbb00d3883f3c4632028dd737 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CLSA_c37930 4d0c924fbb00d3883f3c4632028dd737 488 Pfam PF00171 Aldehyde dehydrogenase family 20 479 1.7E-164 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c37930 4d0c924fbb00d3883f3c4632028dd737 488 SUPERFAMILY SSF53720 8 483 2.23E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c37930 4d0c924fbb00d3883f3c4632028dd737 488 Gene3D G3DSA:3.40.309.10 263 449 1.6E-160 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 SUPERFAMILY SSF58104 234 569 4.32E-59 T 12-10-2018 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 SMART SM00283 295 556 1.9E-53 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 1.8E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 1.8E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 1.8E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 Gene3D G3DSA:1.10.287.950 262 570 1.4E-60 T 12-10-2018 CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 Pfam PF12729 Four helix bundle sensory module for signal transduction 10 187 3.9E-13 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c42480 a768924766eb991cdb49a2e8564ebc72 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 523 9.8E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c40180 2a3b6b01065de4438bff65032f9e781f 288 Gene3D G3DSA:3.40.50.620 19 275 7.3E-47 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c40180 2a3b6b01065de4438bff65032f9e781f 288 Pfam PF01171 PP-loop family 56 218 5.3E-15 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CLSA_c40180 2a3b6b01065de4438bff65032f9e781f 288 SUPERFAMILY SSF52402 32 229 2.21E-45 T 12-10-2018 CLSA_c40180 2a3b6b01065de4438bff65032f9e781f 288 PIRSF PIRSF004976 13 285 1.0E-68 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CLSA_c39470 73e055b2dc1b6340e6721da0055f6479 355 Gene3D G3DSA:3.40.50.2000 174 310 1.4E-35 T 12-10-2018 CLSA_c39470 73e055b2dc1b6340e6721da0055f6479 355 SUPERFAMILY SSF53756 191 353 1.63E-15 T 12-10-2018 CLSA_c39470 73e055b2dc1b6340e6721da0055f6479 355 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 294 4.3E-71 T 12-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase CLSA_c39470 73e055b2dc1b6340e6721da0055f6479 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 216 335 3.2E-6 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CLSA_c39470 73e055b2dc1b6340e6721da0055f6479 355 Gene3D G3DSA:3.40.50.11190 1 173 7.2E-24 T 12-10-2018 CLSA_c42110 f6171076f894ef7e9a6525d174b03692 405 Pfam PF12733 Cadherin-like beta sandwich domain 186 279 6.7E-21 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c42110 f6171076f894ef7e9a6525d174b03692 405 Gene3D G3DSA:2.10.270.10 236 404 5.6E-28 T 12-10-2018 CLSA_c42110 f6171076f894ef7e9a6525d174b03692 405 Pfam PF01473 Putative cell wall binding repeat 362 376 0.0053 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42110 f6171076f894ef7e9a6525d174b03692 405 Pfam PF01473 Putative cell wall binding repeat 322 339 0.71 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42110 f6171076f894ef7e9a6525d174b03692 405 Pfam PF01473 Putative cell wall binding repeat 342 360 4.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42110 f6171076f894ef7e9a6525d174b03692 405 SUPERFAMILY SSF69360 300 404 1.07E-26 T 12-10-2018 CLSA_c00740 d87aa440f1d441ab27ea881a8d70d1c2 261 PIRSF PIRSF005902 1 261 5.0E-84 T 12-10-2018 IPR001130 TatD family GO:0016788 CLSA_c00740 d87aa440f1d441ab27ea881a8d70d1c2 261 Gene3D G3DSA:3.20.20.140 1 260 4.2E-97 T 12-10-2018 CLSA_c00740 d87aa440f1d441ab27ea881a8d70d1c2 261 Pfam PF01026 TatD related DNase 8 256 2.8E-80 T 12-10-2018 IPR001130 TatD family GO:0016788 CLSA_c00740 d87aa440f1d441ab27ea881a8d70d1c2 261 SUPERFAMILY SSF51556 6 256 1.08E-86 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c00740 d87aa440f1d441ab27ea881a8d70d1c2 261 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 7 256 2.6E-84 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 327 340 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 Gene3D G3DSA:3.40.640.10 172 397 2.1E-225 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 SUPERFAMILY SSF53383 114 537 1.19E-43 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 21 541 2.6E-267 T 12-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 Gene3D G3DSA:1.10.20.110 50 419 2.1E-225 T 12-10-2018 CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 Pfam PF00155 Aminotransferase class I and II 201 525 6.6E-22 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c16110 3a7b40caf51e7297b250f61629f8f96f 545 Gene3D G3DSA:3.90.1150.10 43 539 2.1E-225 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 157 174 4.2E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 23 37 4.2E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 176 194 4.2E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 199 219 4.2E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 27 33 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 Pfam PF01555 DNA methylase 147 214 2.4E-11 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 Gene3D G3DSA:3.40.50.150 2 230 2.3E-31 T 12-10-2018 CLSA_c30050 0e7a45f568f29872fb2d0ff1861a13bd 231 SUPERFAMILY SSF53335 3 222 1.69E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c44440 2e65d4da63f11756a178fe369ba7348f 442 Gene3D G3DSA:3.30.565.10 284 435 5.7E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c44440 2e65d4da63f11756a178fe369ba7348f 442 Pfam PF14501 GHKL domain 329 432 3.7E-16 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLSA_c44440 2e65d4da63f11756a178fe369ba7348f 442 SUPERFAMILY SSF55874 300 411 1.83E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c40270 e0433703a698a4c4c423126e06316a9c 322 Pfam PF06803 Protein of unknown function (DUF1232) 229 265 4.7E-10 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 15 69 2.3E-18 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 ProSitePatterns PS00605 ATP synthase c subunit signature. 34 55 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 Gene3D G3DSA:1.20.20.10 1 70 1.3E-23 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 Pfam PF00137 ATP synthase subunit C 6 67 8.8E-18 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 Hamap MF_01396 ATP synthase subunit c [atpH]. 1 69 15.548 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 SUPERFAMILY SSF81333 2 70 5.1E-20 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 PRINTS PR00124 ATP synthase C subunit signature 44 69 1.7E-21 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 PRINTS PR00124 ATP synthase C subunit signature 6 25 1.7E-21 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c05100 b3a29f24d4ec5e18874cabbacb545ec5 71 PRINTS PR00124 ATP synthase C subunit signature 27 42 1.7E-21 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CLSA_c32390 92846fa347d7eb2ee5ad395c8b497a7b 236 Pfam PF01966 HD domain 71 190 2.6E-19 T 12-10-2018 IPR006674 HD domain CLSA_c32390 92846fa347d7eb2ee5ad395c8b497a7b 236 SUPERFAMILY SSF109604 70 228 7.46E-36 T 12-10-2018 CLSA_c32390 92846fa347d7eb2ee5ad395c8b497a7b 236 Gene3D G3DSA:1.10.3210.10 44 235 4.1E-64 T 12-10-2018 CLSA_c32390 92846fa347d7eb2ee5ad395c8b497a7b 236 TIGRFAM TIGR00277 HDIG: HDIG domain 71 159 1.7E-7 T 12-10-2018 IPR006675 HDIG domain CLSA_c32390 92846fa347d7eb2ee5ad395c8b497a7b 236 SMART SM00471 65 200 1.5E-10 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c23010 5f6d4f23048f6ec1e7a4069ebef1224b 679 Gene3D G3DSA:3.90.1720.10 339 504 6.5E-24 T 12-10-2018 CLSA_c23010 5f6d4f23048f6ec1e7a4069ebef1224b 679 SUPERFAMILY SSF54001 377 495 4.66E-13 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c23010 5f6d4f23048f6ec1e7a4069ebef1224b 679 Pfam PF00877 NlpC/P60 family 392 497 8.9E-8 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CLSA_c23010 5f6d4f23048f6ec1e7a4069ebef1224b 679 Gene3D G3DSA:1.10.530.40 529 676 3.3E-31 T 12-10-2018 CLSA_c23010 5f6d4f23048f6ec1e7a4069ebef1224b 679 SUPERFAMILY SSF53955 526 672 4.76E-26 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c23010 5f6d4f23048f6ec1e7a4069ebef1224b 679 SUPERFAMILY SSF69279 21 124 6.8E-6 T 12-10-2018 CLSA_c40360 4f13c821df5e3321f8470ee8b4a074ce 77 Pfam PF03840 Preprotein translocase SecG subunit 4 76 2.5E-17 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLSA_c40360 4f13c821df5e3321f8470ee8b4a074ce 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 76 5.4E-14 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLSA_c20410 b8f7ff6f3bb8048e37da0025e099fee2 629 SUPERFAMILY SSF48371 457 624 8.06E-16 T 12-10-2018 IPR016024 Armadillo-type fold CLSA_c20410 b8f7ff6f3bb8048e37da0025e099fee2 629 Pfam PF13646 HEAT repeats 543 622 2.3E-6 T 12-10-2018 CLSA_c20410 b8f7ff6f3bb8048e37da0025e099fee2 629 Gene3D G3DSA:1.25.10.10 7 221 1.6E-11 T 12-10-2018 IPR011989 Armadillo-like helical CLSA_c20410 b8f7ff6f3bb8048e37da0025e099fee2 629 Gene3D G3DSA:1.25.10.10 438 628 2.1E-12 T 12-10-2018 IPR011989 Armadillo-like helical CLSA_c20410 b8f7ff6f3bb8048e37da0025e099fee2 629 SUPERFAMILY SSF48371 16 183 1.66E-11 T 12-10-2018 IPR016024 Armadillo-type fold CLSA_c12600 21f19ea40360faafcf09996dab6e338e 348 Pfam PF09992 Phosphodiester glycosidase 164 347 1.0E-50 T 12-10-2018 IPR018711 Phosphodiester glycosidase CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 PRINTS PR01780 Lantibiotic regulatory protein signature 95 111 9.0E-8 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 PRINTS PR01780 Lantibiotic regulatory protein signature 254 269 9.0E-8 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 PRINTS PR01780 Lantibiotic regulatory protein signature 193 208 9.0E-8 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 Gene3D G3DSA:3.30.565.10 158 301 6.0E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 Gene3D G3DSA:1.10.287.130 81 151 2.5E-14 T 12-10-2018 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 SMART SM00387 197 303 1.5E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 SMART SM00388 86 151 3.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 SUPERFAMILY SSF55874 141 300 3.14E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 SUPERFAMILY SSF47384 69 152 5.1E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 Pfam PF00512 His Kinase A (phospho-acceptor) domain 93 151 4.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c06350 b04fca718830f1dc98ebe8ecf77de1eb 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 197 286 3.0E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c28300 4989b8df57fa0ab21feabe74260fadc9 475 Gene3D G3DSA:1.10.10.1100 383 460 6.7E-23 T 12-10-2018 CLSA_c28300 4989b8df57fa0ab21feabe74260fadc9 475 Pfam PF01266 FAD dependent oxidoreductase 3 350 4.0E-63 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLSA_c28300 4989b8df57fa0ab21feabe74260fadc9 475 Gene3D G3DSA:3.30.9.10 86 314 6.2E-126 T 12-10-2018 CLSA_c28300 4989b8df57fa0ab21feabe74260fadc9 475 Gene3D G3DSA:3.50.50.60 3 347 6.2E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c28300 4989b8df57fa0ab21feabe74260fadc9 475 Pfam PF04324 BFD-like [2Fe-2S] binding domain 397 451 1.9E-15 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CLSA_c28300 4989b8df57fa0ab21feabe74260fadc9 475 SUPERFAMILY SSF51905 1 357 2.24E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 417 3.1E-157 T 12-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 419 48.948 T 12-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 3 417 1.6E-224 T 12-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 Gene3D G3DSA:3.30.499.20 4 270 2.8E-98 T 12-10-2018 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 SUPERFAMILY SSF53732 1 418 1.83E-143 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 417 1.3E-174 T 12-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 Pfam PF00330 Aconitase family (aconitate hydratase) 8 411 1.7E-97 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 Gene3D G3DSA:3.30.499.10 273 418 2.8E-55 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 PRINTS PR00415 Aconitase family signature 204 217 1.0E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 PRINTS PR00415 Aconitase family signature 128 143 1.0E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 PRINTS PR00415 Aconitase family signature 114 127 1.0E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 PRINTS PR00415 Aconitase family signature 352 365 1.0E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c02690 971dffa2b0eb77294fa0b809ec99cc11 419 PRINTS PR00415 Aconitase family signature 190 203 1.0E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CLSA_c38930 f7c1b3188f4bc21867d9f78c98ba83d0 299 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 7 299 8.7E-148 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CLSA_c38930 f7c1b3188f4bc21867d9f78c98ba83d0 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 253 3.7E-63 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CLSA_c38930 f7c1b3188f4bc21867d9f78c98ba83d0 299 SUPERFAMILY SSF52402 4 207 5.07E-71 T 12-10-2018 CLSA_c38930 f7c1b3188f4bc21867d9f78c98ba83d0 299 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 2 299 53.514 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CLSA_c38930 f7c1b3188f4bc21867d9f78c98ba83d0 299 Gene3D G3DSA:3.40.50.620 5 209 3.1E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c38930 f7c1b3188f4bc21867d9f78c98ba83d0 299 PIRSF PIRSF002936 1 299 1.7E-145 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 SUPERFAMILY SSF52313 6 229 1.31E-94 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 Pfam PF00318 Ribosomal protein S2 9 225 1.1E-97 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 227 1.0E-106 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 Gene3D G3DSA:1.10.287.610 101 151 9.6E-25 T 12-10-2018 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 42.326 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 PRINTS PR00395 Ribosomal protein S2 signature 159 176 8.8E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 PRINTS PR00395 Ribosomal protein S2 signature 176 187 8.8E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14100 80fae2a937514e639a3e18086d13f006 233 PRINTS PR00395 Ribosomal protein S2 signature 197 211 8.8E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 Pfam PF13242 HAD-hyrolase-like 184 256 5.7E-17 T 12-10-2018 CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 PIRSF PIRSF000915 1 263 1.4E-60 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 107 7.2E-24 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 233 1.7E-44 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 Gene3D G3DSA:3.40.50.1000 85 184 3.3E-74 T 12-10-2018 IPR023214 HAD superfamily CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 Gene3D G3DSA:3.40.50.1000 8 252 3.3E-74 T 12-10-2018 IPR023214 HAD superfamily CLSA_c30520 bb1007707ecd299b8b8009cafd09997c 263 SUPERFAMILY SSF56784 5 258 3.56E-63 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 Gene3D G3DSA:1.10.287.130 63 164 2.6E-22 T 12-10-2018 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 Gene3D G3DSA:3.30.565.10 171 323 6.3E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 Pfam PF00512 His Kinase A (phospho-acceptor) domain 87 167 2.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 SMART SM00387 211 323 2.1E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 SUPERFAMILY SSF55874 158 321 1.31E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 SUPERFAMILY SSF47384 83 167 1.96E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 1.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 320 1.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 1.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 283 301 1.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20520 b50ddfeb30c62dde1b7af7361748bf40 323 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 214 321 7.1E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c04930 d406d1b976cd2bdaaec24d3aeeec12a0 138 SUPERFAMILY SSF50814 7 136 2.89E-25 T 12-10-2018 IPR012674 Calycin CLSA_c04930 d406d1b976cd2bdaaec24d3aeeec12a0 138 Pfam PF09148 Domain of unknown function (DUF1934) 7 128 8.9E-32 T 12-10-2018 IPR015231 Protein of unknown function DUF1934 CLSA_c04930 d406d1b976cd2bdaaec24d3aeeec12a0 138 Gene3D G3DSA:2.40.128.20 2 138 4.7E-29 T 12-10-2018 IPR012674 Calycin CLSA_c30110 0dfeea053cf6f23ff7043f3750b197a3 90 Gene3D G3DSA:1.10.287.1080 3 87 4.0E-5 T 12-10-2018 CLSA_c30110 0dfeea053cf6f23ff7043f3750b197a3 90 SUPERFAMILY SSF101386 10 65 2.7E-5 T 12-10-2018 CLSA_c05040 9c86675a9e7801bbb80a81af5ae7c9d4 149 Pfam PF02502 Ribose/Galactose Isomerase 3 140 5.0E-62 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c05040 9c86675a9e7801bbb80a81af5ae7c9d4 149 SUPERFAMILY SSF89623 1 144 3.01E-63 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c05040 9c86675a9e7801bbb80a81af5ae7c9d4 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 3.1E-60 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c05040 9c86675a9e7801bbb80a81af5ae7c9d4 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 3.5E-58 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CLSA_c05040 9c86675a9e7801bbb80a81af5ae7c9d4 149 Gene3D G3DSA:3.40.1400.10 1 148 4.0E-65 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c05040 9c86675a9e7801bbb80a81af5ae7c9d4 149 PIRSF PIRSF005384 1 147 1.1E-64 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 SUPERFAMILY SSF54368 5 104 1.96E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 99 1.5E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 Pfam PF00120 Glutamine synthetase, catalytic domain 106 439 1.9E-140 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 SUPERFAMILY SSF55931 105 441 4.71E-128 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 440 2.4E-174 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 233 248 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 SMART SM01230 105 353 2.9E-140 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 Gene3D G3DSA:3.10.20.70 2 107 3.4E-43 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLSA_c11610 0ba1e0f6ec5b79521734da8e2771a470 443 Gene3D G3DSA:3.30.590.10 108 443 5.2E-139 T 12-10-2018 CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 SUPERFAMILY SSF51004 50 359 9.68E-67 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 150 186 2.3E-11 T 12-10-2018 IPR011964 YVTN beta-propeller repeat CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 321 361 6.2E-13 T 12-10-2018 IPR011964 YVTN beta-propeller repeat CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 192 227 1.1E-9 T 12-10-2018 IPR011964 YVTN beta-propeller repeat CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 Pfam PF10282 Lactonase, 7-bladed beta-propeller 135 251 1.4E-7 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 Gene3D G3DSA:2.130.10.10 44 113 1.9E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 Gene3D G3DSA:2.130.10.10 261 362 3.4E-26 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c23340 fd544b5ab56053a8eb512197a21b5dbe 362 Gene3D G3DSA:2.130.10.10 114 260 1.5E-38 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 SUPERFAMILY SSF56281 64 480 3.67E-94 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 Gene3D G3DSA:3.60.15.10 67 498 6.9E-187 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 Hamap MF_01491 Ribonuclease J [rnj]. 59 611 46.609 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 420 448 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 Gene3D G3DSA:3.10.20.580 505 611 1.5E-36 T 12-10-2018 CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 SMART SM00849 76 271 8.3E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 Pfam PF00753 Metallo-beta-lactamase superfamily 74 220 8.9E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 64 608 4.1E-200 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 410 464 7.7E-9 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 PIRSF PIRSF004803 56 611 1.7E-237 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLSA_c38470 5d7c3aafc3ab365e3f4f67696b399140 611 Gene3D G3DSA:3.40.50.10710 263 413 6.9E-187 T 12-10-2018 CLSA_c42320 929702fe495b48fd58365fcb9e07e3d4 366 Pfam PF00534 Glycosyl transferases group 1 183 329 2.3E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c42320 929702fe495b48fd58365fcb9e07e3d4 366 Gene3D G3DSA:3.40.50.2000 171 349 4.8E-35 T 12-10-2018 CLSA_c42320 929702fe495b48fd58365fcb9e07e3d4 366 Gene3D G3DSA:3.40.50.2000 29 170 4.8E-35 T 12-10-2018 CLSA_c42320 929702fe495b48fd58365fcb9e07e3d4 366 SUPERFAMILY SSF53756 28 365 1.36E-36 T 12-10-2018 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 SUPERFAMILY SSF54768 115 227 1.46E-22 T 12-10-2018 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 Pfam PF14622 Ribonuclease-III-like 20 142 1.5E-39 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 Gene3D G3DSA:3.30.160.20 160 226 5.6E-22 T 12-10-2018 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 Gene3D G3DSA:1.10.1520.10 5 152 1.5E-46 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 SMART SM00535 21 154 1.2E-50 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 225 1.3E-78 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 Pfam PF00035 Double-stranded RNA binding motif 162 227 7.1E-16 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 224 30.473 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 SUPERFAMILY SSF69065 6 163 2.96E-49 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CLSA_c13910 0a3749565b24ba87cba130bfa33d2cbe 232 SMART SM00358 161 228 5.0E-18 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain CLSA_c33700 e8cd85b2f0b55756b6b67d1a62ff66bf 463 Pfam PF05525 Branched-chain amino acid transport protein 23 456 5.6E-147 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLSA_c33700 e8cd85b2f0b55756b6b67d1a62ff66bf 463 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 30 445 2.7E-130 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 SUPERFAMILY SSF158472 199 248 5.89E-8 T 12-10-2018 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 SMART SM00388 257 324 9.7E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 SMART SM00304 197 249 4.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 SUPERFAMILY SSF55874 314 480 4.19E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 Gene3D G3DSA:3.30.565.10 333 483 2.9E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 324 1.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 Pfam PF00672 HAMP domain 199 245 1.8E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 SUPERFAMILY SSF47384 243 325 9.61E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 476 1.5E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 SMART SM00387 371 482 2.8E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 Gene3D G3DSA:1.20.1480.50 162 251 3.2E-8 T 12-10-2018 CLSA_c10520 a81ec9a6b202be7eb17dbd24cdeca363 488 Gene3D G3DSA:1.10.287.130 252 324 2.6E-18 T 12-10-2018 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 Gene3D G3DSA:3.30.70.2120 182 302 8.1E-79 T 12-10-2018 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 403 8.1E-28 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 PRINTS PR00207 Flagellin signature 35 52 1.9E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 PRINTS PR00207 Flagellin signature 74 93 1.9E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 PRINTS PR00207 Flagellin signature 109 132 1.9E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 Gene3D G3DSA:1.20.1330.10 42 353 8.1E-79 T 12-10-2018 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 4.4E-46 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 SUPERFAMILY SSF64518 1 404 3.79E-94 T 12-10-2018 CLSA_c39630 5b099ec506a855d6acd73315f5be5dbc 404 Gene3D G3DSA:1.10.8.410 354 404 3.3E-25 T 12-10-2018 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Gene3D G3DSA:3.30.470.20 353 472 3.0E-13 T 12-10-2018 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Pfam PF02875 Mur ligase family, glutamate ligase domain 720 801 2.9E-10 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Pfam PF08245 Mur ligase middle domain 483 693 1.8E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Pfam PF08443 RimK-like ATP-grasp domain 384 467 1.8E-5 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Pfam PF08443 RimK-like ATP-grasp domain 212 315 9.8E-8 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 481 504 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Gene3D G3DSA:3.40.1190.10 474 712 2.2E-38 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Gene3D G3DSA:3.30.470.20 203 327 9.0E-12 T 12-10-2018 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 SUPERFAMILY SSF56059 213 472 4.21E-31 T 12-10-2018 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 SUPERFAMILY SSF53623 442 728 9.16E-43 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 SUPERFAMILY SSF53244 719 847 2.38E-21 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 861 1.1E-282 T 12-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 CLSA_c04890 fcaf27a1353b1e5a428e9ceca35521b1 873 Gene3D G3DSA:3.90.190.20 720 863 7.0E-21 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Gene3D G3DSA:4.10.860.10 601 655 1.4E-6 T 12-10-2018 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Gene3D G3DSA:3.40.50.300 269 412 2.1E-56 T 12-10-2018 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 SUPERFAMILY SSF46600 610 654 2.48E-10 T 12-10-2018 IPR036876 UVR domain superfamily CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 SMART SM00487 8 424 4.1E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Pfam PF02151 UvrB/uvrC motif 621 655 2.5E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Gene3D G3DSA:3.40.50.300 413 594 5.1E-51 T 12-10-2018 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Pfam PF12344 Ultra-violet resistance protein B 550 592 4.0E-21 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Gene3D G3DSA:3.40.50.300 1 232 1.4E-80 T 12-10-2018 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Pfam PF04851 Type III restriction enzyme, res subunit 10 118 8.0E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 SUPERFAMILY SSF52540 2 413 1.85E-141 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 SMART SM00490 458 544 3.8E-21 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 SUPERFAMILY SSF52540 32 584 8.59E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 655 43.059 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 654 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CLSA_c43040 aaf8d7fff9f4f0ceb6061449eb0ebadd 655 Pfam PF00271 Helicase conserved C-terminal domain 431 543 7.6E-19 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c26950 ae91ebd7074d4030d67d337a713eaac7 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 71 125 5.4E-16 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family CLSA_c26950 ae91ebd7074d4030d67d337a713eaac7 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 3 57 7.0E-11 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family CLSA_c26950 ae91ebd7074d4030d67d337a713eaac7 127 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 30 127 6.4E-35 T 12-10-2018 IPR014211 Stage III sporulation protein AD CLSA_c40310 2c5181558e96ccfcbdeb7a0bc3869718 274 Pfam PF03180 NLPA lipoprotein 37 274 8.9E-98 T 12-10-2018 IPR004872 Lipoprotein NlpA family CLSA_c40310 2c5181558e96ccfcbdeb7a0bc3869718 274 Gene3D G3DSA:3.40.190.10 37 271 7.8E-107 T 12-10-2018 CLSA_c40310 2c5181558e96ccfcbdeb7a0bc3869718 274 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 16 272 4.1E-70 T 12-10-2018 IPR004872 Lipoprotein NlpA family CLSA_c40310 2c5181558e96ccfcbdeb7a0bc3869718 274 Gene3D G3DSA:3.40.190.10 118 220 7.8E-107 T 12-10-2018 CLSA_c40310 2c5181558e96ccfcbdeb7a0bc3869718 274 PIRSF PIRSF002854 1 274 3.5E-110 T 12-10-2018 IPR004872 Lipoprotein NlpA family CLSA_c40310 2c5181558e96ccfcbdeb7a0bc3869718 274 SUPERFAMILY SSF53850 37 274 3.08E-90 T 12-10-2018 CLSA_c28440 211f05190b60ae9cea61828504d51506 402 Pfam PF14907 Uncharacterised nucleotidyltransferase 33 271 5.4E-47 T 12-10-2018 IPR039498 Uncharacterised nucleotidyltransferase CLSA_c32960 3b9ab1c43e17eb496154dcb9fb52321e 207 Pfam PF16161 Domain of unknown function (DUF4867) 3 204 2.9E-94 T 12-10-2018 IPR032358 Protein of unknown function DUF4867 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 Gene3D G3DSA:2.170.8.10 35 325 4.0E-213 T 12-10-2018 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 2 521 2.0E-215 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 Gene3D G3DSA:3.90.228.20 210 508 4.0E-213 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 SUPERFAMILY SSF53795 209 521 9.61E-129 T 12-10-2018 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 Gene3D G3DSA:3.40.449.10 27 209 4.0E-213 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 9 522 53.161 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 Pfam PF01293 Phosphoenolpyruvate carboxykinase 15 476 7.7E-216 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 246 261 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 PIRSF PIRSF006294 1 522 3.1E-228 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CLSA_c34800 f6ba095a3d0e18ae0212ccc8a057a394 522 SUPERFAMILY SSF68923 2 208 4.36E-79 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 538 584 7.2E-10 T 12-10-2018 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 Gene3D G3DSA:3.40.50.300 130 284 2.2E-113 T 12-10-2018 CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 Gene3D G3DSA:3.40.50.300 285 430 2.2E-113 T 12-10-2018 CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 Gene3D G3DSA:1.20.272.40 129 455 2.2E-113 T 12-10-2018 CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 SMART SM00490 316 405 5.3E-18 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 SUPERFAMILY SSF52540 141 411 8.46E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25800 31aedaf5c23c57f23aa234f017dae774 585 Pfam PF00271 Helicase conserved C-terminal domain 302 405 4.4E-12 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c13610 7fec37e735bb8ce7c3b8fa0318d1dd2a 89 Pfam PF04025 Domain of unknown function (DUF370) 5 77 1.2E-37 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A CLSA_c13610 7fec37e735bb8ce7c3b8fa0318d1dd2a 89 Hamap MF_01503 UPF0296 protein . 3 89 29.77 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A CLSA_c13610 7fec37e735bb8ce7c3b8fa0318d1dd2a 89 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 1.0E-35 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A CLSA_c43020 1b308a98d2313213c34670791c6c18dc 147 Pfam PF00498 FHA domain 76 139 2.8E-18 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLSA_c43020 1b308a98d2313213c34670791c6c18dc 147 SUPERFAMILY SSF49879 68 144 1.49E-23 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CLSA_c43020 1b308a98d2313213c34670791c6c18dc 147 Gene3D G3DSA:2.60.200.20 32 147 4.0E-24 T 12-10-2018 CLSA_c43020 1b308a98d2313213c34670791c6c18dc 147 SMART SM00240 74 124 2.7E-12 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLSA_c25910 86221b41e1b231cfb9492622496fc18f 165 PIRSF PIRSF031501 1 164 1.8E-49 T 12-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 CLSA_c25910 86221b41e1b231cfb9492622496fc18f 165 Gene3D G3DSA:1.10.1760.20 3 162 4.1E-6 T 12-10-2018 CLSA_c25910 86221b41e1b231cfb9492622496fc18f 165 Pfam PF06177 QueT transporter 10 157 8.5E-46 T 12-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 CLSA_c01680 3c046832c29cfcd8d321143adaa33e04 151 PIRSF PIRSF010607 1 151 6.6E-55 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 CLSA_c01680 3c046832c29cfcd8d321143adaa33e04 151 Gene3D G3DSA:1.10.10.1240 2 72 6.4E-33 T 12-10-2018 CLSA_c01680 3c046832c29cfcd8d321143adaa33e04 151 Gene3D G3DSA:1.10.1200.150 76 150 1.3E-11 T 12-10-2018 CLSA_c01680 3c046832c29cfcd8d321143adaa33e04 151 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 148 4.2E-53 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 CLSA_c22760 303c23845ad113cb358edb6fded29db5 156 Pfam PF07875 Coat F domain 94 156 1.8E-23 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c22760 303c23845ad113cb358edb6fded29db5 156 PIRSF PIRSF033860 1 156 2.2E-68 T 12-10-2018 IPR017022 Uncharacterised conserved protein UCP033860 CLSA_c22760 303c23845ad113cb358edb6fded29db5 156 SUPERFAMILY SSF47240 8 153 9.17E-22 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c22760 303c23845ad113cb358edb6fded29db5 156 Gene3D G3DSA:1.20.1260.10 6 152 2.3E-5 T 12-10-2018 IPR012347 Ferritin-like CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 Pfam PF07885 Ion channel 135 208 1.2E-18 T 12-10-2018 IPR013099 Potassium channel domain CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 Gene3D G3DSA:1.20.120.350 4 128 1.3E-26 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 Gene3D G3DSA:1.10.287.70 129 218 6.8E-24 T 12-10-2018 CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 SUPERFAMILY SSF81324 8 211 7.98E-45 T 12-10-2018 CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 PRINTS PR00169 Potassium channel signature 182 208 1.5E-10 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 PRINTS PR00169 Potassium channel signature 40 60 1.5E-10 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 PRINTS PR00169 Potassium channel signature 92 118 1.5E-10 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CLSA_c16210 2b11953b9fbd69efbd8b482d2d4214f7 255 PRINTS PR00169 Potassium channel signature 153 175 1.5E-10 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CLSA_c37690 2a7eb1d8b8cb66c2a76613d7c3937d19 207 Gene3D G3DSA:3.40.50.150 2 203 5.7E-43 T 12-10-2018 CLSA_c37690 2a7eb1d8b8cb66c2a76613d7c3937d19 207 SUPERFAMILY SSF53335 16 193 5.47E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c37690 2a7eb1d8b8cb66c2a76613d7c3937d19 207 Pfam PF08241 Methyltransferase domain 52 145 1.7E-25 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CLSA_c30900 9c403f563ef37ba84b5e572d97f4176d 258 Pfam PF03746 LamB/YcsF family 4 241 6.3E-103 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CLSA_c30900 9c403f563ef37ba84b5e572d97f4176d 258 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.437 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CLSA_c30900 9c403f563ef37ba84b5e572d97f4176d 258 SUPERFAMILY SSF88713 3 253 1.85E-100 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c30900 9c403f563ef37ba84b5e572d97f4176d 258 Gene3D G3DSA:3.20.20.370 2 256 2.3E-105 T 12-10-2018 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 Gene3D G3DSA:3.40.50.2300 2 139 1.9E-44 T 12-10-2018 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 Gene3D G3DSA:2.40.50.1020 140 242 5.1E-33 T 12-10-2018 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 Pfam PF00072 Response regulator receiver domain 4 120 1.3E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 Pfam PF04397 LytTr DNA-binding domain 149 239 5.7E-22 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 SMART SM00448 2 121 6.4E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 SMART SM00850 149 241 1.5E-19 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c44430 01ac5a16f234edf341147484c28026c4 242 SUPERFAMILY SSF52172 1 125 5.83E-12 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 323 1.8E-18 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 SUPERFAMILY SSF101801 252 325 4.97E-15 T 12-10-2018 IPR036429 SpoA-like superfamily CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 PIRSF PIRSF002888 1 332 1.7E-115 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 1.4E-89 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 5.2E-20 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 5.2E-20 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 5.2E-20 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 5.2E-20 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 Gene3D G3DSA:2.30.330.10 240 329 6.5E-12 T 12-10-2018 IPR036429 SpoA-like superfamily CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 Gene3D G3DSA:3.40.1550.10 45 230 4.2E-58 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 SUPERFAMILY SSF103039 45 229 1.27E-28 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c39760 7e22c25b1fc07dd41efcf6bc60c88f39 332 Pfam PF02154 Flagellar motor switch protein FliM 39 229 1.5E-54 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLSA_c34350 b791bdad952aa1cc37a7f6bd310890fd 180 Gene3D G3DSA:3.40.630.30 1 177 1.9E-44 T 12-10-2018 CLSA_c34350 b791bdad952aa1cc37a7f6bd310890fd 180 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 2.0E-29 T 12-10-2018 IPR000182 GNAT domain CLSA_c34350 b791bdad952aa1cc37a7f6bd310890fd 180 SUPERFAMILY SSF55729 1 157 1.06E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c30320 ea18ff9f2e05e7c08936370cdbb4cdd8 315 Gene3D G3DSA:1.10.443.10 112 311 3.8E-37 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c30320 ea18ff9f2e05e7c08936370cdbb4cdd8 315 SUPERFAMILY SSF56349 13 294 5.3E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c30320 ea18ff9f2e05e7c08936370cdbb4cdd8 315 Gene3D G3DSA:1.10.150.130 6 111 1.6E-11 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c30320 ea18ff9f2e05e7c08936370cdbb4cdd8 315 Pfam PF00589 Phage integrase family 125 285 1.8E-29 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c30320 ea18ff9f2e05e7c08936370cdbb4cdd8 315 Pfam PF13102 Phage integrase SAM-like domain 14 101 5.1E-7 T 12-10-2018 IPR025269 Phage integrase SAM-like domain CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 Gene3D G3DSA:1.10.10.2830 107 220 4.8E-37 T 12-10-2018 CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 SMART SM00470 29 119 2.3E-34 T 12-10-2018 IPR003115 ParB/Sulfiredoxin CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 Pfam PF02195 ParB-like nuclease domain 31 119 1.3E-25 T 12-10-2018 IPR003115 ParB/Sulfiredoxin CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 SUPERFAMILY SSF109709 111 222 1.36E-35 T 12-10-2018 CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 Gene3D G3DSA:3.90.1530.30 42 105 9.0E-27 T 12-10-2018 CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 SUPERFAMILY SSF110849 29 121 8.63E-27 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CLSA_c45420 dd8fe2d611f77cacc8d25b2c51f0ae1d 287 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 205 7.0E-59 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 PRINTS PR01780 Lantibiotic regulatory protein signature 151 166 3.5E-7 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 PRINTS PR01780 Lantibiotic regulatory protein signature 54 70 3.5E-7 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 PRINTS PR01780 Lantibiotic regulatory protein signature 213 228 3.5E-7 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 Pfam PF00512 His Kinase A (phospho-acceptor) domain 47 108 5.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 SMART SM00388 45 110 1.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 Gene3D G3DSA:3.30.565.10 112 257 2.3E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 SMART SM00387 155 260 1.6E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 Gene3D G3DSA:1.10.287.130 39 110 1.2E-16 T 12-10-2018 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 156 245 1.5E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 SUPERFAMILY SSF47384 41 108 3.14E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20880 44ec1ec13806f6dfb6dfb7cf3464193c 263 SUPERFAMILY SSF55874 116 244 3.14E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 4.9E-18 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 SUPERFAMILY SSF46785 9 66 7.3E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 Gene3D G3DSA:1.10.10.10 1 61 1.1E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 SMART SM00420 11 63 1.1E-16 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 Pfam PF00455 DeoR C terminal sensor domain 87 242 8.2E-40 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 SUPERFAMILY SSF100950 87 245 1.26E-22 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 SMART SM01134 84 244 4.7E-46 T 12-10-2018 CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 3.4E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c38460 86998eea8fa02d3aade170f5e706c5da 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 3.4E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c30260 c422fb314bb0dbb533fc984b66c4edb6 67 Gene3D G3DSA:1.10.260.40 4 67 1.1E-11 T 12-10-2018 CLSA_c30260 c422fb314bb0dbb533fc984b66c4edb6 67 SUPERFAMILY SSF47413 5 64 1.49E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c30260 c422fb314bb0dbb533fc984b66c4edb6 67 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 65 7.7E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30260 c422fb314bb0dbb533fc984b66c4edb6 67 SMART SM00530 7 63 2.4E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c03790 1f814f7120f57b9aba2e74604cfa814c 279 SUPERFAMILY SSF53955 150 276 7.32E-37 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c03790 1f814f7120f57b9aba2e74604cfa814c 279 Gene3D G3DSA:1.10.530.10 120 278 5.2E-41 T 12-10-2018 CLSA_c03790 1f814f7120f57b9aba2e74604cfa814c 279 Pfam PF01464 Transglycosylase SLT domain 154 252 1.5E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 CLSA_c29110 b64d096102be53de2c605f3122ef718b 256 SUPERFAMILY SSF52980 9 155 5.9E-39 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLSA_c29110 b64d096102be53de2c605f3122ef718b 256 Gene3D G3DSA:3.40.1350.10 4 155 6.0E-44 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CLSA_c29110 b64d096102be53de2c605f3122ef718b 256 Pfam PF08722 TnsA endonuclease N terminal 58 151 2.4E-13 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal CLSA_c29110 b64d096102be53de2c605f3122ef718b 256 Pfam PF08721 TnsA endonuclease C terminal 154 231 8.6E-16 T 12-10-2018 IPR014832 TnsA endonuclease C-terminal CLSA_c16140 eb2c616b98fee3accdb78d11c6bd8632 388 SUPERFAMILY SSF56796 3 384 4.84E-120 T 12-10-2018 CLSA_c16140 eb2c616b98fee3accdb78d11c6bd8632 388 Gene3D G3DSA:1.20.1090.10 184 384 6.3E-63 T 12-10-2018 CLSA_c16140 eb2c616b98fee3accdb78d11c6bd8632 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 372 6.3E-117 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c16140 eb2c616b98fee3accdb78d11c6bd8632 388 Gene3D G3DSA:3.40.50.1970 1 182 9.5E-52 T 12-10-2018 CLSA_c16140 eb2c616b98fee3accdb78d11c6bd8632 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c16140 eb2c616b98fee3accdb78d11c6bd8632 388 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 256 276 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLSA_c26970 e754e338697ee183be50caf509664e32 172 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 172 4.1E-49 T 12-10-2018 IPR014198 Stage III sporulation protein AB CLSA_c26970 e754e338697ee183be50caf509664e32 172 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 172 1.5E-46 T 12-10-2018 IPR014198 Stage III sporulation protein AB CLSA_c26970 e754e338697ee183be50caf509664e32 172 PIRSF PIRSF021435 1 172 4.9E-53 T 12-10-2018 IPR014198 Stage III sporulation protein AB CLSA_c05810 3dd1e8e3c3e90ab44c5dd8d766034be4 631 PIRSF PIRSF018968 1 631 3.3E-69 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 CLSA_c05810 3dd1e8e3c3e90ab44c5dd8d766034be4 631 Pfam PF02687 FtsX-like permease family 85 174 2.9E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 41.284 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 6.8E-252 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 PRINTS PR00298 60kDa chaperonin signature 348 373 8.5E-72 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 PRINTS PR00298 60kDa chaperonin signature 82 109 8.5E-72 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 PRINTS PR00298 60kDa chaperonin signature 266 289 8.5E-72 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 PRINTS PR00298 60kDa chaperonin signature 26 52 8.5E-72 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 PRINTS PR00298 60kDa chaperonin signature 396 417 8.5E-72 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 SUPERFAMILY SSF52029 183 374 1.79E-84 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 5.5E-103 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 Gene3D G3DSA:3.50.7.10 190 370 9.6E-231 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 Gene3D G3DSA:1.10.560.10 7 519 9.6E-231 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 Gene3D G3DSA:3.30.260.10 135 408 9.6E-231 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 SUPERFAMILY SSF54849 137 205 4.12E-26 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CLSA_c03660 7931326cb5a0b18c9e68c8c781317686 542 SUPERFAMILY SSF48592 6 519 9.92E-78 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily CLSA_c37150 136d6f09b265e7c12ad5c3352887db26 403 SUPERFAMILY SSF111369 51 143 1.18E-5 T 12-10-2018 CLSA_c37150 136d6f09b265e7c12ad5c3352887db26 403 Pfam PF13533 Biotin-lipoyl like 60 107 4.6E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLSA_c37150 136d6f09b265e7c12ad5c3352887db26 403 Pfam PF13437 HlyD family secretion protein 224 313 3.7E-7 T 12-10-2018 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 SUPERFAMILY SSF51445 2 462 3.32E-168 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 Gene3D G3DSA:3.20.20.80 4 471 8.3E-165 T 12-10-2018 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 294 308 2.2E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 406 423 2.2E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 2.2E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 2.2E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 385 396 2.2E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site CLSA_c15060 fa580d0e2d040d305fcdbb226a6193ba 471 Pfam PF00232 Glycosyl hydrolase family 1 3 466 2.8E-145 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 Pfam PF01473 Putative cell wall binding repeat 60 82 0.0068 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 Pfam PF01473 Putative cell wall binding repeat 18 37 0.013 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 Pfam PF01473 Putative cell wall binding repeat 39 58 2.1E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 Pfam PF00959 Phage lysozyme 143 260 1.0E-11 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 SUPERFAMILY SSF53955 113 269 8.7E-30 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 Gene3D G3DSA:2.10.270.10 1 109 2.4E-20 T 12-10-2018 CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 Gene3D G3DSA:1.10.530.40 113 272 1.9E-33 T 12-10-2018 CLSA_c29690 916224f1c1dc77db7ebca106e0695d56 275 SUPERFAMILY SSF69360 5 110 1.31E-19 T 12-10-2018 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.0E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 1.0E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 1.0E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.0E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 1.0E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 Gene3D G3DSA:3.50.50.60 121 255 6.1E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 SUPERFAMILY SSF51905 2 325 1.3E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.0E-22 T 12-10-2018 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 8.0E-22 T 12-10-2018 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 8.0E-22 T 12-10-2018 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 8.0E-22 T 12-10-2018 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 8.0E-22 T 12-10-2018 CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 Gene3D G3DSA:3.50.50.60 4 298 6.1E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c28290 3b83c87132df653f71323802ac4fa2af 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 298 6.9E-32 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c34430 b7df154731fd611a0e299fdb2ba906d9 180 SUPERFAMILY SSF46785 9 177 5.72E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c34430 b7df154731fd611a0e299fdb2ba906d9 180 Gene3D G3DSA:1.10.10.10 4 105 1.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c34430 b7df154731fd611a0e299fdb2ba906d9 180 Pfam PF03551 Transcriptional regulator PadR-like family 13 87 7.3E-7 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 PIRSF PIRSF004930 1 349 2.9E-128 T 12-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 207 1.2E-66 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 Gene3D G3DSA:3.90.870.10 2 212 4.0E-81 T 12-10-2018 CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 Pfam PF03481 Putative GTP-binding controlling metal-binding 200 343 2.1E-26 T 12-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 Pfam PF01300 Telomere recombination 23 198 1.1E-56 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 SUPERFAMILY SSF55821 12 208 1.01E-62 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLSA_c05030 bd3c50f6dabe9220762b31650c1a1c64 349 Gene3D G3DSA:3.40.50.11030 216 349 1.4E-42 T 12-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 Gene3D G3DSA:3.30.450.20 71 180 9.1E-20 T 12-10-2018 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 Gene3D G3DSA:3.30.450.20 60 280 9.1E-20 T 12-10-2018 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 SMART SM00283 387 662 4.0E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 SUPERFAMILY SSF58104 326 662 3.01E-59 T 12-10-2018 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 Gene3D G3DSA:1.10.287.950 374 662 8.5E-62 T 12-10-2018 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 611 1.4E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 Gene3D G3DSA:1.10.8.500 306 357 1.0E-6 T 12-10-2018 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 SMART SM00304 306 358 4.0E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c18130 b3b64636bda946f19afab6e144a5a83b 663 SUPERFAMILY SSF103190 75 188 1.0E-4 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 SUPERFAMILY SSF51412 4 174 8.24E-33 T 12-10-2018 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 SMART SM01240 7 470 0.0 T 12-10-2018 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 450 2.6E-195 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 SMART SM00116 96 144 5.4E-8 T 12-10-2018 IPR000644 CBS domain CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 SMART SM00116 157 205 2.1E-10 T 12-10-2018 IPR000644 CBS domain CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 470 3.9E-163 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 Gene3D G3DSA:3.20.20.70 1 483 6.2E-221 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 483 84.793 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 PIRSF PIRSF000130 1 485 4.6E-210 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 Pfam PF00571 CBS domain 149 200 1.3E-10 T 12-10-2018 IPR000644 CBS domain CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 Pfam PF00571 CBS domain 95 140 3.3E-8 T 12-10-2018 IPR000644 CBS domain CLSA_c03680 39ec3028821de9b0ad2fdc185f61e54f 485 SUPERFAMILY SSF51412 117 481 1.96E-127 T 12-10-2018 CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 Gene3D G3DSA:2.60.120.260 51 184 1.6E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 Gene3D G3DSA:2.60.40.1080 185 274 2.5E-17 T 12-10-2018 CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 Pfam PF01345 Domain of unknown function DUF11 335 421 4.6E-9 T 12-10-2018 IPR001434 Domain of unknown function DUF11 CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 SMART SM00635 194 267 2.2E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 337 385 3.2E-9 T 12-10-2018 IPR001434 Domain of unknown function DUF11 CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 SUPERFAMILY SSF49373 196 271 1.73E-15 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 SUPERFAMILY SSF49785 55 187 9.36E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c32940 2acae01723a64312cb30de70e6fb4b82 423 Pfam PF02368 Bacterial Ig-like domain (group 2) 207 268 5.2E-11 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c25590 402f8728f1335c44ff945e1b26fba842 292 Pfam PF00892 EamA-like transporter family 5 138 9.8E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c25590 402f8728f1335c44ff945e1b26fba842 292 Pfam PF00892 EamA-like transporter family 149 283 1.6E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c25590 402f8728f1335c44ff945e1b26fba842 292 SUPERFAMILY SSF103481 40 140 5.49E-14 T 12-10-2018 CLSA_c25590 402f8728f1335c44ff945e1b26fba842 292 SUPERFAMILY SSF103481 208 286 6.02E-10 T 12-10-2018 CLSA_c39230 66ebc7188e86f9b49e8bbb55129f330e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.9E-19 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLSA_c39230 66ebc7188e86f9b49e8bbb55129f330e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.9E-19 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLSA_c39230 66ebc7188e86f9b49e8bbb55129f330e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.9E-19 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLSA_c39230 66ebc7188e86f9b49e8bbb55129f330e 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 3.4E-27 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLSA_c39230 66ebc7188e86f9b49e8bbb55129f330e 89 PIRSF PIRSF004669 1 89 2.5E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLSA_c45360 06aff0cd7826bb7b7617d83cfea29fd9 299 SUPERFAMILY SSF50182 127 185 2.91E-14 T 12-10-2018 IPR010920 LSM domain superfamily CLSA_c45360 06aff0cd7826bb7b7617d83cfea29fd9 299 SUPERFAMILY SSF82861 34 125 2.48E-7 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CLSA_c45360 06aff0cd7826bb7b7617d83cfea29fd9 299 Pfam PF00924 Mechanosensitive ion channel 86 282 3.7E-38 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CLSA_c45360 06aff0cd7826bb7b7617d83cfea29fd9 299 Gene3D G3DSA:2.30.30.60 142 191 1.2E-17 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CLSA_c45360 06aff0cd7826bb7b7617d83cfea29fd9 299 Gene3D G3DSA:3.30.70.100 192 280 4.3E-23 T 12-10-2018 CLSA_c45360 06aff0cd7826bb7b7617d83cfea29fd9 299 SUPERFAMILY SSF82689 191 282 5.36E-13 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CLSA_c27590 45c014032037512c7ffd5b643a5e7e14 174 SUPERFAMILY SSF46785 11 88 3.84E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c27590 45c014032037512c7ffd5b643a5e7e14 174 Pfam PF14277 Domain of unknown function (DUF4364) 11 172 1.6E-52 T 12-10-2018 IPR025374 Protein of unknown function DUF4364 CLSA_c27590 45c014032037512c7ffd5b643a5e7e14 174 Gene3D G3DSA:1.10.10.10 11 109 2.0E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 182 5.1E-91 T 12-10-2018 IPR014213 Sporulation stage V, protein T CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 182 3.8E-47 T 12-10-2018 IPR039472 Sporulation stage V protein T, GAF domain CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 PIRSF PIRSF026579 1 183 1.9E-90 T 12-10-2018 IPR014213 Sporulation stage V, protein T CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 SMART SM00966 8 52 3.4E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 SUPERFAMILY SSF89447 1 51 2.49E-14 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 SUPERFAMILY SSF55781 52 182 1.33E-5 T 12-10-2018 CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 Gene3D G3DSA:3.30.450.40 56 183 5.5E-42 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.9E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 Gene3D G3DSA:2.10.260.10 1 51 2.6E-23 T 12-10-2018 CLSA_c01160 1b9659f9216ffaefd65a40dc1c0d6549 183 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 3.6E-15 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 Gene3D G3DSA:3.40.50.410 146 365 5.9E-28 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 SMART SM00327 84 361 6.7E-10 T 12-10-2018 IPR002035 von Willebrand factor, type A CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 SMART SM00327 509 682 3.7E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 Gene3D G3DSA:3.40.50.410 502 640 3.6E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 Pfam PF13519 von Willebrand factor type A domain 152 249 5.3E-10 T 12-10-2018 IPR002035 von Willebrand factor, type A CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 Pfam PF13519 von Willebrand factor type A domain 512 621 2.8E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 SUPERFAMILY SSF53300 510 652 2.82E-17 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c11570 88ce80f42b7410ef40047000aea76f31 991 SUPERFAMILY SSF53300 69 362 3.29E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c23170 82b952c637049a7f74b6155cf904af67 114 SUPERFAMILY SSF52821 10 107 2.23E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily CLSA_c23170 82b952c637049a7f74b6155cf904af67 114 SMART SM00450 16 111 1.1E-12 T 12-10-2018 IPR001763 Rhodanese-like domain CLSA_c23170 82b952c637049a7f74b6155cf904af67 114 Pfam PF00581 Rhodanese-like domain 24 105 1.9E-13 T 12-10-2018 IPR001763 Rhodanese-like domain CLSA_c23170 82b952c637049a7f74b6155cf904af67 114 Gene3D G3DSA:3.40.250.10 22 114 6.7E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily CLSA_c08770 01334dda57c9717a7c0016bc21089418 184 Pfam PF04647 Accessory gene regulator B 6 178 3.7E-34 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c08770 01334dda57c9717a7c0016bc21089418 184 SMART SM00793 4 183 1.1E-14 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 SMART SM00382 50 221 7.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 SUPERFAMILY SSF52540 33 234 4.26E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 Pfam PF00005 ABC transporter 41 173 1.7E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 Gene3D G3DSA:3.40.50.300 27 258 1.9E-48 T 12-10-2018 CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 Pfam PF14524 Wzt C-terminal domain 272 405 1.3E-13 T 12-10-2018 IPR029439 Wzt, C-terminal CLSA_c42030 8f899ab0f7c7a66a9af76faf5ca95d20 419 Gene3D G3DSA:2.70.50.60 259 403 8.6E-10 T 12-10-2018 CLSA_c06740 60a262392e13339c2074f42436241db1 636 PRINTS PR01607 Apyrase family signature 392 415 8.6E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 PRINTS PR01607 Apyrase family signature 38 56 8.6E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 PRINTS PR01607 Apyrase family signature 462 481 8.6E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 PRINTS PR01607 Apyrase family signature 210 227 8.6E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 PRINTS PR01607 Apyrase family signature 235 258 8.6E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 Gene3D G3DSA:3.60.21.10 34 333 3.0E-58 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c06740 60a262392e13339c2074f42436241db1 636 SUPERFAMILY SSF69360 530 635 5.76E-29 T 12-10-2018 CLSA_c06740 60a262392e13339c2074f42436241db1 636 Gene3D G3DSA:2.10.270.10 551 636 6.7E-28 T 12-10-2018 CLSA_c06740 60a262392e13339c2074f42436241db1 636 Pfam PF01473 Putative cell wall binding repeat 599 617 1.7E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c06740 60a262392e13339c2074f42436241db1 636 Pfam PF01473 Putative cell wall binding repeat 559 577 0.028 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c06740 60a262392e13339c2074f42436241db1 636 Pfam PF01473 Putative cell wall binding repeat 580 597 7.7E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c06740 60a262392e13339c2074f42436241db1 636 Gene3D G3DSA:3.90.780.10 345 535 4.7E-48 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 Pfam PF02872 5'-nucleotidase, C-terminal domain 341 488 1.1E-35 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 SUPERFAMILY SSF56300 37 335 2.71E-59 T 12-10-2018 CLSA_c06740 60a262392e13339c2074f42436241db1 636 SUPERFAMILY SSF55816 335 515 1.19E-41 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLSA_c06740 60a262392e13339c2074f42436241db1 636 Pfam PF00149 Calcineurin-like phosphoesterase 42 252 5.6E-8 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 3.7E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 3.7E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 Gene3D G3DSA:1.20.120.530 81 222 5.4E-32 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 SMART SM00345 20 78 8.9E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 78 1.3E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 Pfam PF07729 FCD domain 88 209 7.1E-29 T 12-10-2018 IPR011711 GntR, C-terminal CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 SUPERFAMILY SSF46785 14 104 6.31E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 Gene3D G3DSA:1.10.10.10 2 79 7.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 SUPERFAMILY SSF48008 84 217 8.63E-31 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CLSA_c34890 16177fd86114cecdcded7ea0a6726129 224 SMART SM00895 88 212 3.0E-22 T 12-10-2018 IPR011711 GntR, C-terminal CLSA_c18790 4566f4acaf51bce9b4a0fb78f4842907 442 Gene3D G3DSA:1.20.1250.20 11 209 1.8E-13 T 12-10-2018 CLSA_c18790 4566f4acaf51bce9b4a0fb78f4842907 442 Gene3D G3DSA:1.20.1250.20 223 430 1.5E-12 T 12-10-2018 CLSA_c18790 4566f4acaf51bce9b4a0fb78f4842907 442 SUPERFAMILY SSF103473 11 421 6.71E-36 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c18790 4566f4acaf51bce9b4a0fb78f4842907 442 Pfam PF13347 MFS/sugar transport protein 12 425 3.0E-96 T 12-10-2018 CLSA_c18790 4566f4acaf51bce9b4a0fb78f4842907 442 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 10 435 1.1E-92 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CLSA_c37070 1f5e078b46a52c87b6099a5eed2279d1 488 SUPERFAMILY SSF52743 3 229 3.27E-29 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c37070 1f5e078b46a52c87b6099a5eed2279d1 488 Pfam PF00082 Subtilase family 3 227 9.6E-14 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c37070 1f5e078b46a52c87b6099a5eed2279d1 488 Gene3D G3DSA:3.40.50.200 1 241 9.3E-33 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 Gene3D G3DSA:3.30.479.20 152 285 8.3E-52 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 SUPERFAMILY SSF54713 152 304 2.75E-51 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 Pfam PF00889 Elongation factor TS 73 286 1.2E-74 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 Gene3D G3DSA:1.10.286.20 200 244 8.3E-52 T 12-10-2018 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 Gene3D G3DSA:3.30.479.20 57 151 9.4E-26 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 Hamap MF_00050 Elongation factor Ts [tsf]. 1 303 76.689 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 304 5.0E-101 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 SUPERFAMILY SSF46934 4 55 7.79E-19 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 SUPERFAMILY SSF54713 56 147 6.67E-21 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CLSA_c14110 fc244b15e8f559ccac91cfafb3460d8e 305 Gene3D G3DSA:1.10.8.10 1 56 1.1E-26 T 12-10-2018 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 SMART SM00028 3 33 260.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 SMART SM00028 34 67 0.0025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 SMART SM00028 68 100 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 Pfam PF00515 Tetratricopeptide repeat 34 65 2.4E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 Gene3D G3DSA:1.25.40.10 68 105 2.5E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 Gene3D G3DSA:1.25.40.10 1 67 8.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 Pfam PF07720 Tetratricopeptide repeat 10 28 0.013 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 CLSA_c27850 f9aba0d7bc038138dafbb68edc0eb308 116 SUPERFAMILY SSF48452 3 104 4.87E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c41850 f3fbe80348bf57998d0845b7da2dabaf 382 Pfam PF12733 Cadherin-like beta sandwich domain 194 278 4.0E-11 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41850 f3fbe80348bf57998d0845b7da2dabaf 382 Gene3D G3DSA:2.10.270.10 284 381 2.1E-21 T 12-10-2018 CLSA_c41850 f3fbe80348bf57998d0845b7da2dabaf 382 SUPERFAMILY SSF69360 280 380 5.1E-22 T 12-10-2018 CLSA_c41850 f3fbe80348bf57998d0845b7da2dabaf 382 Pfam PF01473 Putative cell wall binding repeat 343 362 1.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41850 f3fbe80348bf57998d0845b7da2dabaf 382 Pfam PF01473 Putative cell wall binding repeat 324 341 4.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24550 85120ea284d7b88c0123830b8fbf4448 96 Gene3D G3DSA:3.30.70.930 1 96 1.8E-37 T 12-10-2018 IPR029756 MTH1187/YkoF-like CLSA_c24550 85120ea284d7b88c0123830b8fbf4448 96 Pfam PF01910 Thiamine-binding protein 6 94 7.2E-29 T 12-10-2018 IPR002767 Thiamine-binding protein CLSA_c24550 85120ea284d7b88c0123830b8fbf4448 96 SUPERFAMILY SSF89957 3 95 2.35E-28 T 12-10-2018 IPR029756 MTH1187/YkoF-like CLSA_c34980 3354e597fc09d7d02c513ee209056419 196 Gene3D G3DSA:2.60.120.10 78 196 1.7E-41 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c34980 3354e597fc09d7d02c513ee209056419 196 Pfam PF07883 Cupin domain 103 178 2.3E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel CLSA_c34980 3354e597fc09d7d02c513ee209056419 196 SUPERFAMILY SSF51182 66 183 1.53E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c32240 d195fc615177088d6a3f136f07753af9 328 Pfam PF13353 4Fe-4S single cluster domain 79 173 8.1E-10 T 12-10-2018 CLSA_c32240 d195fc615177088d6a3f136f07753af9 328 SUPERFAMILY SSF102114 72 306 8.11E-31 T 12-10-2018 CLSA_c32240 d195fc615177088d6a3f136f07753af9 328 PIRSF PIRSF004869 1 306 4.0E-76 T 12-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted CLSA_c32240 d195fc615177088d6a3f136f07753af9 328 Pfam PF04055 Radical SAM superfamily 79 227 7.9E-21 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c32240 d195fc615177088d6a3f136f07753af9 328 Gene3D G3DSA:3.20.20.70 71 281 1.1E-35 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c32240 d195fc615177088d6a3f136f07753af9 328 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 12 324 7.2E-84 T 12-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme CLSA_c08690 8f082cd0c8b233b9b185e0c1314ed0ce 285 SMART SM00382 27 206 3.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c08690 8f082cd0c8b233b9b185e0c1314ed0ce 285 Gene3D G3DSA:3.40.50.300 1 244 5.3E-42 T 12-10-2018 CLSA_c08690 8f082cd0c8b233b9b185e0c1314ed0ce 285 SUPERFAMILY SSF52540 4 219 1.11E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c08690 8f082cd0c8b233b9b185e0c1314ed0ce 285 Pfam PF00005 ABC transporter 18 157 2.7E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c08690 8f082cd0c8b233b9b185e0c1314ed0ce 285 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c34630 650fb847ed69b2959bddc39e130f33db 189 Gene3D G3DSA:3.40.50.1820 2 189 5.1E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c34630 650fb847ed69b2959bddc39e130f33db 189 SUPERFAMILY SSF53474 4 186 4.48E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c34630 650fb847ed69b2959bddc39e130f33db 189 Pfam PF06821 Serine hydrolase 7 180 2.1E-26 T 12-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 2.0E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 Pfam PF01872 RibD C-terminal domain 146 354 1.0E-54 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 SUPERFAMILY SSF53927 2 143 2.51E-46 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 353 1.3E-116 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 Gene3D G3DSA:3.40.430.10 135 360 8.5E-74 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 PIRSF PIRSF006769 1 361 6.0E-135 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 SUPERFAMILY SSF53597 146 358 2.5E-59 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 357 4.4E-69 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CLSA_c14620 8c23b0362f474f2c09ae914406454d0f 361 Gene3D G3DSA:3.40.140.10 1 134 1.4E-45 T 12-10-2018 CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 SUPERFAMILY SSF88659 106 162 3.74E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 SUPERFAMILY SSF88946 2 98 1.94E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 Pfam PF04542 Sigma-70 region 2 22 79 2.2E-8 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 162 6.5E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 Pfam PF08281 Sigma-70, region 4 109 158 2.2E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 Gene3D G3DSA:1.10.1740.10 1 105 1.5E-21 T 12-10-2018 CLSA_c19870 07a6ddfcc6f1123f3644d7265ecbeee8 175 Gene3D G3DSA:1.10.10.10 106 164 2.0E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 Gene3D G3DSA:3.40.190.10 91 287 1.4E-43 T 12-10-2018 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 SUPERFAMILY SSF53850 91 289 4.02E-32 T 12-10-2018 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 Pfam PF03466 LysR substrate binding domain 91 288 7.2E-33 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 Gene3D G3DSA:3.40.190.10 163 265 1.4E-43 T 12-10-2018 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 SUPERFAMILY SSF46785 1 84 3.4E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c14930 1e72bb4b61b39a55808246643ca94c22 293 Gene3D G3DSA:1.10.10.10 1 87 5.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c27220 3d27f4895d714ab0e9482a0ca7428bfd 88 Pfam PF02325 YGGT family 12 83 7.9E-17 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 CLSA_c31900 690ef9d1eed6f66d9f24b7ffec41e006 369 Pfam PF01966 HD domain 142 264 3.3E-14 T 12-10-2018 IPR006674 HD domain CLSA_c31900 690ef9d1eed6f66d9f24b7ffec41e006 369 Gene3D G3DSA:1.10.3210.10 4 306 4.7E-68 T 12-10-2018 CLSA_c31900 690ef9d1eed6f66d9f24b7ffec41e006 369 SMART SM00471 138 274 4.6E-12 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c31900 690ef9d1eed6f66d9f24b7ffec41e006 369 SUPERFAMILY SSF109604 137 303 7.97E-31 T 12-10-2018 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 SUPERFAMILY SSF51269 287 350 1.02E-18 T 12-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 SUPERFAMILY SSF51569 4 302 1.47E-90 T 12-10-2018 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 Gene3D G3DSA:3.20.20.70 4 277 4.1E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 18 344 7.6E-156 T 12-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 Pfam PF08666 SAF domain 293 349 1.0E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 SMART SM00858 292 350 1.7E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 Pfam PF03102 NeuB family 38 277 2.3E-95 T 12-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 CLSA_c39500 69337f75653228aa43fd5054bef024e9 350 Gene3D G3DSA:3.90.1210.10 293 350 9.2E-21 T 12-10-2018 CLSA_c43310 ec25f621146efa779a5ff0c9fb3f4c76 196 Pfam PF08876 Domain of unknown function (DUF1836) 24 127 2.2E-25 T 12-10-2018 IPR014975 Protein of unknown function DUF1836 CLSA_c39340 a56a613c2862c377d80959cd8e80e7d5 258 Pfam PF02108 Flagellar assembly protein FliH 129 246 7.5E-6 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 PRINTS PR00474 Glutamate 5-kinase family signature 6 20 2.6E-5 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 PRINTS PR00474 Glutamate 5-kinase family signature 139 166 2.6E-5 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 Pfam PF00696 Amino acid kinase family 7 213 1.9E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 235 6.5E-99 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 SUPERFAMILY SSF53633 4 236 4.71E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 235 45.13 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 Gene3D G3DSA:3.40.1160.10 2 237 5.2E-81 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c14120 a7e40810c189cbc186262bd237dbde77 237 PIRSF PIRSF005650 1 237 6.4E-95 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 SUPERFAMILY SSF46785 5 77 1.55E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 8.2E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 8.2E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 Pfam PF07702 UTRA domain 96 234 1.4E-37 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 Gene3D G3DSA:3.40.1410.10 77 240 5.7E-51 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 SMART SM00345 16 74 8.5E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 SUPERFAMILY SSF64288 63 239 1.02E-47 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 SMART SM00866 95 234 1.0E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 Gene3D G3DSA:1.10.10.10 1 74 1.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09620 ae2c4131ce304a93de34d4d82f4b4f56 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.9E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 SUPERFAMILY SSF103473 4 458 8.89E-45 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 21 233 1.0E-58 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 246 466 1.8E-44 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 Gene3D G3DSA:1.20.1250.20 4 243 2.0E-77 T 12-10-2018 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 Gene3D G3DSA:1.20.1250.20 244 467 1.0E-58 T 12-10-2018 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 160 172 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 Pfam PF00854 POT family 98 221 2.4E-29 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 Pfam PF00854 POT family 249 433 1.6E-34 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 CLSA_c33530 cdff046a64cd08afedf2c0e038638a65 467 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 86 110 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CLSA_c11770 5086174412935d0476f1e54b4558519f 206 SUPERFAMILY SSF53955 33 189 4.79E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c11770 5086174412935d0476f1e54b4558519f 206 Pfam PF01464 Transglycosylase SLT domain 37 148 1.2E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 CLSA_c11770 5086174412935d0476f1e54b4558519f 206 Gene3D G3DSA:1.10.530.10 27 194 1.7E-49 T 12-10-2018 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 SMART SM00382 145 273 1.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 447 2.1E-184 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Pfam PF11638 DnaA N-terminal domain 7 67 2.0E-13 T 12-10-2018 IPR024633 DnaA N-terminal domain CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Gene3D G3DSA:1.10.1750.10 348 450 2.8E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 448 34.649 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 SMART SM00760 357 426 1.2E-43 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Gene3D G3DSA:3.40.50.300 95 277 5.7E-55 T 12-10-2018 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 358 426 9.4E-33 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 ProSitePatterns PS01008 DnaA protein signature. 407 426 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Pfam PF00308 Bacterial dnaA protein 113 330 3.6E-103 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Gene3D G3DSA:1.10.8.60 279 347 3.8E-30 T 12-10-2018 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 Gene3D G3DSA:3.30.300.180 2 82 8.3E-22 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 SUPERFAMILY SSF52540 113 324 1.39E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 SUPERFAMILY SSF48295 344 448 1.05E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 166 1.3E-53 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 271 1.3E-53 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 407 426 1.3E-53 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 210 224 1.3E-53 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CLSA_c00010 d8b80b2a695970f0d43022557d084ea8 450 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 178 192 1.3E-53 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 207 341 3.2E-41 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 SUPERFAMILY SSF52518 373 568 5.9E-58 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 Gene3D G3DSA:3.40.50.970 369 572 8.3E-56 T 12-10-2018 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 SUPERFAMILY SSF52467 204 367 4.24E-56 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 SUPERFAMILY SSF52518 4 173 4.12E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 544 6.1E-42 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 Gene3D G3DSA:3.40.50.970 2 177 3.6E-65 T 12-10-2018 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 1.6E-199 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 169 3.7E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CLSA_c17280 fcd99a6c34ef0c61724b33277621c502 573 Gene3D G3DSA:3.40.50.1220 201 365 3.8E-55 T 12-10-2018 CLSA_c10570 fd8a32b82afac0aadfd56b98ffeb8105 488 Pfam PF12704 MacB-like periplasmic core domain 21 329 7.9E-28 T 12-10-2018 IPR025857 MacB-like periplasmic core domain CLSA_c10570 fd8a32b82afac0aadfd56b98ffeb8105 488 Pfam PF02687 FtsX-like permease family 394 481 2.3E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c08470 0acaabaa8404562b7395dcb6b7e1cde7 276 Gene3D G3DSA:3.40.50.300 128 273 2.6E-21 T 12-10-2018 CLSA_c08470 0acaabaa8404562b7395dcb6b7e1cde7 276 SUPERFAMILY SSF109604 32 149 1.22E-12 T 12-10-2018 CLSA_c08470 0acaabaa8404562b7395dcb6b7e1cde7 276 Pfam PF13671 AAA domain 133 257 3.7E-13 T 12-10-2018 CLSA_c08470 0acaabaa8404562b7395dcb6b7e1cde7 276 TIGRFAM TIGR00277 HDIG: HDIG domain 42 122 2.1E-11 T 12-10-2018 IPR006675 HDIG domain CLSA_c08470 0acaabaa8404562b7395dcb6b7e1cde7 276 SUPERFAMILY SSF52540 137 260 9.85E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c08470 0acaabaa8404562b7395dcb6b7e1cde7 276 Pfam PF01966 HD domain 60 181 6.2E-8 T 12-10-2018 IPR006674 HD domain CLSA_c21820 e214cc5d9a08d8c28f84bb411bc80ef2 322 Pfam PF01207 Dihydrouridine synthase (Dus) 46 258 2.2E-25 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLSA_c21820 e214cc5d9a08d8c28f84bb411bc80ef2 322 SUPERFAMILY SSF51395 1 306 3.48E-36 T 12-10-2018 CLSA_c21820 e214cc5d9a08d8c28f84bb411bc80ef2 322 PIRSF PIRSF006621 1 316 1.0E-55 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLSA_c21820 e214cc5d9a08d8c28f84bb411bc80ef2 322 Gene3D G3DSA:3.20.20.70 1 236 2.8E-55 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Gene3D G3DSA:3.90.550.10 1 145 1.7E-9 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Gene3D G3DSA:1.25.40.10 233 347 2.4E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Gene3D G3DSA:1.25.40.10 168 232 5.6E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Pfam PF00535 Glycosyl transferase family 2 3 129 5.0E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 SMART SM00028 198 231 0.0056 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 SMART SM00028 309 342 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 SMART SM00028 269 302 32.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 SUPERFAMILY SSF53448 1 144 5.79E-17 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 SUPERFAMILY SSF48452 186 336 2.66E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Pfam PF07719 Tetratricopeptide repeat 199 226 1.8E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Pfam PF13176 Tetratricopeptide repeat 312 339 2.0E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c39490 243715e2b606a03e8bed272f467f6f6d 350 Pfam PF13181 Tetratricopeptide repeat 269 299 0.0039 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 4.1E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 Gene3D G3DSA:3.40.50.2300 1 124 3.5E-33 T 12-10-2018 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 SUPERFAMILY SSF52172 2 132 1.71E-37 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 SMART SM00862 147 223 3.0E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 SUPERFAMILY SSF46894 131 223 2.07E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 SMART SM00448 2 112 1.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23400 b284f33d7e4d3e8dba394973e9bb3ab3 231 Gene3D G3DSA:1.10.10.10 125 231 2.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c33390 9a104ebac5c73abae0667f63861069ae 134 Gene3D G3DSA:3.10.180.10 1 133 1.2E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c33390 9a104ebac5c73abae0667f63861069ae 134 SUPERFAMILY SSF54593 1 131 8.59E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c33390 9a104ebac5c73abae0667f63861069ae 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 128 4.3E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 SUPERFAMILY SSF69360 169 412 9.61E-32 T 12-10-2018 CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Gene3D G3DSA:2.10.270.10 341 415 3.1E-17 T 12-10-2018 CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Gene3D G3DSA:2.10.270.10 268 340 6.2E-14 T 12-10-2018 CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 SUPERFAMILY SSF49899 38 272 6.34E-79 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Pfam PF00722 Glycosyl hydrolases family 16 78 269 8.5E-34 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Pfam PF01473 Putative cell wall binding repeat 350 365 0.0011 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Pfam PF01473 Putative cell wall binding repeat 304 322 7.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Pfam PF01473 Putative cell wall binding repeat 377 395 7.5E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24280 c17728c43f5bdb17fdf7f4f7b8185817 415 Gene3D G3DSA:2.60.120.200 33 267 5.0E-83 T 12-10-2018 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.166 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 Gene3D G3DSA:3.90.1170.10 1 144 3.4E-60 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.4E-53 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 SUPERFAMILY SSF54686 1 140 5.89E-62 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.4E-62 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-38 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-38 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-38 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-38 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02080 658f1c3af9fd35affbe9c7b07fec5fd4 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c24120 2aceee6d6badc996ad23af33de6c64d0 254 SMART SM00382 29 233 7.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c24120 2aceee6d6badc996ad23af33de6c64d0 254 SUPERFAMILY SSF52540 3 244 6.9E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c24120 2aceee6d6badc996ad23af33de6c64d0 254 Gene3D G3DSA:3.40.50.300 1 252 5.1E-70 T 12-10-2018 CLSA_c24120 2aceee6d6badc996ad23af33de6c64d0 254 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c24120 2aceee6d6badc996ad23af33de6c64d0 254 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 3 245 1.4E-108 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CLSA_c24120 2aceee6d6badc996ad23af33de6c64d0 254 Pfam PF00005 ABC transporter 20 176 3.6E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c39840 7b60a67569fe468bd1166de714b484c3 149 Pfam PF01584 CheW-like domain 8 143 6.2E-32 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c39840 7b60a67569fe468bd1166de714b484c3 149 Gene3D G3DSA:2.30.30.40 10 134 2.4E-34 T 12-10-2018 CLSA_c39840 7b60a67569fe468bd1166de714b484c3 149 Gene3D G3DSA:2.40.50.180 26 135 2.4E-34 T 12-10-2018 CLSA_c39840 7b60a67569fe468bd1166de714b484c3 149 SUPERFAMILY SSF50341 4 144 5.49E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c39840 7b60a67569fe468bd1166de714b484c3 149 SMART SM00260 3 140 7.5E-31 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c40840 fbcadb04a871fd1e87e9bf9e3d2aabd6 264 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 175 5.0E-29 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c40840 fbcadb04a871fd1e87e9bf9e3d2aabd6 264 SMART SM00304 204 256 6.0E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c40840 fbcadb04a871fd1e87e9bf9e3d2aabd6 264 Gene3D G3DSA:1.20.1480.50 163 263 3.8E-7 T 12-10-2018 CLSA_c40840 fbcadb04a871fd1e87e9bf9e3d2aabd6 264 SUPERFAMILY SSF158472 209 254 2.62E-5 T 12-10-2018 CLSA_c38980 64337d1230f654acac89f6e43b74d4b6 274 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 269 2.3E-118 T 12-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CLSA_c38980 64337d1230f654acac89f6e43b74d4b6 274 Gene3D G3DSA:1.10.3720.10 11 270 4.2E-65 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c38980 64337d1230f654acac89f6e43b74d4b6 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 1.5E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c38980 64337d1230f654acac89f6e43b74d4b6 274 SUPERFAMILY SSF161098 13 262 2.43E-52 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c38980 64337d1230f654acac89f6e43b74d4b6 274 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 265 1.2E-91 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CLSA_c37720 aafcc44cecf9dda839e1b1a420ccd3aa 441 Gene3D G3DSA:3.40.50.2000 41 260 2.0E-6 T 12-10-2018 CLSA_c37720 aafcc44cecf9dda839e1b1a420ccd3aa 441 SUPERFAMILY SSF53756 42 433 1.02E-32 T 12-10-2018 CLSA_c37720 aafcc44cecf9dda839e1b1a420ccd3aa 441 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 342 416 2.1E-10 T 12-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 CLSA_c37720 aafcc44cecf9dda839e1b1a420ccd3aa 441 Gene3D G3DSA:3.40.50.2000 261 421 1.3E-20 T 12-10-2018 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 SUPERFAMILY SSF52096 11 271 1.77E-89 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 2 271 40.07 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 Gene3D G3DSA:3.90.226.10 3 272 1.2E-102 T 12-10-2018 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 12 271 3.6E-117 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 43 54 3.6E-42 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 161 3.6E-42 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 68 86 3.6E-42 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 124 137 3.6E-42 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 108 121 3.6E-42 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 89 105 3.6E-42 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c13180 a84f4fb049fbd6305220481a0b0ee63a 272 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 11 103 1.5E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 Gene3D G3DSA:2.60.120.180 59 261 5.3E-94 T 12-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 PRINTS PR00911 Glycosyl hydrolase family 11 signature 196 201 6.2E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 PRINTS PR00911 Glycosyl hydrolase family 11 signature 176 182 6.2E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 PRINTS PR00911 Glycosyl hydrolase family 11 signature 149 159 6.2E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 PRINTS PR00911 Glycosyl hydrolase family 11 signature 224 232 6.2E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 PRINTS PR00911 Glycosyl hydrolase family 11 signature 201 210 6.2E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 PRINTS PR00911 Glycosyl hydrolase family 11 signature 139 148 6.2E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 Pfam PF00457 Glycosyl hydrolases family 11 71 252 1.4E-67 T 12-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 239 250 - T 12-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 SUPERFAMILY SSF49899 61 258 3.05E-84 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c19890 1d8e988a9b0060b25f32885cfc49b3aa 261 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 149 159 - T 12-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 CLSA_c06790 679e925c7671b834d697992fc97eb73f 456 Pfam PF07833 Copper amine oxidase N-terminal domain 83 170 4.0E-6 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal CLSA_c06790 679e925c7671b834d697992fc97eb73f 456 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 193 442 3.2E-56 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 CLSA_c00150 2eb35ffb169e01eb949d0006b3503515 464 Pfam PF01266 FAD dependent oxidoreductase 4 199 3.5E-30 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLSA_c00150 2eb35ffb169e01eb949d0006b3503515 464 SUPERFAMILY SSF51905 1 231 3.08E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c00150 2eb35ffb169e01eb949d0006b3503515 464 Gene3D G3DSA:3.30.9.10 86 264 1.2E-43 T 12-10-2018 CLSA_c00150 2eb35ffb169e01eb949d0006b3503515 464 Gene3D G3DSA:1.10.10.1100 369 443 1.2E-17 T 12-10-2018 CLSA_c00150 2eb35ffb169e01eb949d0006b3503515 464 Gene3D G3DSA:3.50.50.60 4 214 1.2E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c00150 2eb35ffb169e01eb949d0006b3503515 464 Pfam PF04324 BFD-like [2Fe-2S] binding domain 381 435 5.2E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CLSA_c34100 5b7a8d644569c4fae45d157405d1da4d 187 Pfam PF13305 WHG domain 86 161 2.5E-9 T 12-10-2018 IPR025996 WHG domain CLSA_c34100 5b7a8d644569c4fae45d157405d1da4d 187 SUPERFAMILY SSF48498 77 184 6.67E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c34100 5b7a8d644569c4fae45d157405d1da4d 187 SUPERFAMILY SSF46689 6 71 3.44E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c34100 5b7a8d644569c4fae45d157405d1da4d 187 Gene3D G3DSA:1.10.10.60 1 49 3.2E-16 T 12-10-2018 CLSA_c34100 5b7a8d644569c4fae45d157405d1da4d 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 3.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c34100 5b7a8d644569c4fae45d157405d1da4d 187 Gene3D G3DSA:1.10.357.10 51 185 2.2E-20 T 12-10-2018 CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 SUPERFAMILY SSF51735 3 246 1.24E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.2E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.2E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.2E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 9.8E-76 T 12-10-2018 CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 244 1.2E-104 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 1.9E-4 T 12-10-2018 CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.8E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.8E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.8E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.8E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.8E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.8E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c13120 337cb3457678986c2f303b84d3b0f6cb 246 Gene3D G3DSA:3.40.50.720 1 245 1.1E-90 T 12-10-2018 CLSA_c12660 35f5423a1b5ad4251312f0bb7d58a6de 242 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 206 2.9E-55 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CLSA_c12660 35f5423a1b5ad4251312f0bb7d58a6de 242 Gene3D G3DSA:3.40.50.1000 1 224 1.3E-33 T 12-10-2018 IPR023214 HAD superfamily CLSA_c12660 35f5423a1b5ad4251312f0bb7d58a6de 242 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 195 2.2E-33 T 12-10-2018 CLSA_c12660 35f5423a1b5ad4251312f0bb7d58a6de 242 SUPERFAMILY SSF56784 2 233 2.48E-31 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c12660 35f5423a1b5ad4251312f0bb7d58a6de 242 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 193 5.4E-21 T 12-10-2018 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 Pfam PF03466 LysR substrate binding domain 89 301 8.2E-25 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 Gene3D G3DSA:3.40.190.10 91 297 1.5E-36 T 12-10-2018 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 Gene3D G3DSA:3.40.190.10 162 276 1.5E-36 T 12-10-2018 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 SUPERFAMILY SSF53850 89 302 2.17E-24 T 12-10-2018 CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 SUPERFAMILY SSF46785 1 110 2.9E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 Gene3D G3DSA:1.10.10.10 1 82 1.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c32920 bc3edd345bbec63d5fcd8bf541714ab2 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c04970 4fec08cb82b4718bc7dbbf322a2d9553 371 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 15 176 2.4E-32 T 12-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 CLSA_c04970 4fec08cb82b4718bc7dbbf322a2d9553 371 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 198 334 1.3E-10 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CLSA_c04970 4fec08cb82b4718bc7dbbf322a2d9553 371 Gene3D G3DSA:3.40.50.2000 2 189 2.0E-7 T 12-10-2018 CLSA_c04970 4fec08cb82b4718bc7dbbf322a2d9553 371 SUPERFAMILY SSF53756 55 367 3.11E-28 T 12-10-2018 CLSA_c04970 4fec08cb82b4718bc7dbbf322a2d9553 371 Gene3D G3DSA:3.40.50.2000 190 349 1.5E-25 T 12-10-2018 CLSA_c32010 08183012e21d04001f7f560ab1afe9e1 130 SUPERFAMILY SSF52540 7 129 2.2E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32010 08183012e21d04001f7f560ab1afe9e1 130 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 75 125 2.9E-6 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CLSA_c32010 08183012e21d04001f7f560ab1afe9e1 130 Gene3D G3DSA:3.40.50.300 38 129 3.5E-6 T 12-10-2018 CLSA_c03880 6e6d1f6246316c6806f279ea9d7a1ab6 498 Gene3D G3DSA:3.90.76.10 68 188 3.6E-37 T 12-10-2018 CLSA_c03880 6e6d1f6246316c6806f279ea9d7a1ab6 498 SUPERFAMILY SSF53850 41 497 6.7E-33 T 12-10-2018 CLSA_c03880 6e6d1f6246316c6806f279ea9d7a1ab6 498 Gene3D G3DSA:3.40.190.10 58 485 3.6E-37 T 12-10-2018 CLSA_c03880 6e6d1f6246316c6806f279ea9d7a1ab6 498 Gene3D G3DSA:3.10.105.10 284 473 3.6E-37 T 12-10-2018 CLSA_c03880 6e6d1f6246316c6806f279ea9d7a1ab6 498 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 301 2.9E-17 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain CLSA_c42340 65574f56447112cd3c99d6fe7bda5ade 412 Pfam PF13692 Glycosyl transferases group 1 234 371 6.3E-25 T 12-10-2018 CLSA_c42340 65574f56447112cd3c99d6fe7bda5ade 412 Gene3D G3DSA:3.40.50.2000 224 389 3.6E-17 T 12-10-2018 CLSA_c42340 65574f56447112cd3c99d6fe7bda5ade 412 SUPERFAMILY SSF53756 1 401 1.07E-32 T 12-10-2018 CLSA_c42340 65574f56447112cd3c99d6fe7bda5ade 412 Pfam PF13439 Glycosyltransferase Family 4 97 217 5.8E-7 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c42340 65574f56447112cd3c99d6fe7bda5ade 412 Gene3D G3DSA:3.40.50.2000 1 223 2.5E-12 T 12-10-2018 CLSA_c12770 251dab304a328d33477345c4b5ed24a8 166 Gene3D G3DSA:2.160.10.10 1 166 1.2E-60 T 12-10-2018 CLSA_c12770 251dab304a328d33477345c4b5ed24a8 166 SUPERFAMILY SSF51161 5 161 7.9E-45 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c12770 251dab304a328d33477345c4b5ed24a8 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 6.9E-11 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 582 783 6.0E-43 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Gene3D G3DSA:2.10.270.10 438 498 3.8E-19 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Gene3D G3DSA:2.10.270.10 379 437 5.0E-18 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Gene3D G3DSA:3.40.630.40 577 786 3.9E-50 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Gene3D G3DSA:2.10.270.10 263 338 3.9E-20 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 SUPERFAMILY SSF69360 275 379 3.27E-32 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Gene3D G3DSA:2.20.120.10 500 548 2.3E-7 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Gene3D G3DSA:2.20.120.10 339 378 1.2E-9 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 69 193 1.2E-11 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 SUPERFAMILY SSF53187 580 784 1.1E-44 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 318 336 2.0E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 460 478 0.014 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 380 397 0.0056 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 298 316 7.6E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 441 457 2.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 480 498 4.7E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 420 438 0.18 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 400 418 5.4E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 500 514 0.0026 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 Pfam PF01473 Putative cell wall binding repeat 339 356 6.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 SUPERFAMILY SSF69360 380 536 6.83E-52 T 12-10-2018 CLSA_c41530 9bd6bc16d74256afc84e3342695c6e22 786 SMART SM00646 652 783 1.6E-34 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 Pfam PF00574 Clp protease 12 192 2.8E-87 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 SUPERFAMILY SSF52096 10 190 3.13E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 5.9E-105 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 12-10-2018 IPR018215 ClpP, Ser active site CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 Gene3D G3DSA:3.90.226.10 1 198 7.4E-86 T 12-10-2018 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.262 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 2.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 2.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 2.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 2.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c31230 39ad3def4cdb20d0bfed8bc4e8109b1d 200 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 2.6E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 SMART SM01066 495 573 1.3E-26 T 12-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 SMART SM01066 588 668 4.3E-27 T 12-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 PRINTS PR00110 Alpha-amylase signature 308 320 2.9E-9 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 PRINTS PR00110 Alpha-amylase signature 129 140 2.9E-9 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 PRINTS PR00110 Alpha-amylase signature 96 113 2.9E-9 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 PRINTS PR00110 Alpha-amylase signature 212 223 2.9E-9 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Gene3D G3DSA:2.60.40.10 587 669 8.4E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Gene3D G3DSA:2.60.40.10 493 586 5.2E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 SUPERFAMILY SSF51445 44 350 1.68E-53 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 SMART SM00632 389 462 5.2E-12 T 12-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 SMART SM00642 50 401 4.0E-10 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 SUPERFAMILY SSF51011 384 459 6.54E-14 T 12-10-2018 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Gene3D G3DSA:3.20.20.80 45 383 7.6E-106 T 12-10-2018 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Pfam PF16760 Starch/carbohydrate-binding module (family 53) 499 572 3.6E-17 T 12-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Pfam PF16760 Starch/carbohydrate-binding module (family 53) 592 667 1.0E-16 T 12-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Pfam PF00128 Alpha amylase, catalytic domain 109 278 1.3E-19 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c41560 ca096ed86c77c7ca2fb4736d737dbe63 669 Gene3D G3DSA:2.60.40.1180 384 460 6.1E-21 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c27210 064aa82e98062d9ba90688dd8e0c2b99 254 Gene3D G3DSA:3.30.70.330 80 162 3.2E-20 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLSA_c27210 064aa82e98062d9ba90688dd8e0c2b99 254 SMART SM00363 178 238 2.4E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c27210 064aa82e98062d9ba90688dd8e0c2b99 254 Gene3D G3DSA:3.10.290.10 175 228 3.7E-9 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c27210 064aa82e98062d9ba90688dd8e0c2b99 254 SUPERFAMILY SSF55174 69 248 2.62E-20 T 12-10-2018 CLSA_c27210 064aa82e98062d9ba90688dd8e0c2b99 254 Pfam PF01479 S4 domain 179 219 3.3E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c16800 786aeee18e9c72f64fe54f390b1e8b4f 487 Pfam PF01740 STAS domain 393 475 6.6E-6 T 12-10-2018 IPR002645 STAS domain CLSA_c16800 786aeee18e9c72f64fe54f390b1e8b4f 487 Gene3D G3DSA:3.30.750.24 379 476 4.6E-24 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c16800 786aeee18e9c72f64fe54f390b1e8b4f 487 SUPERFAMILY SSF52091 386 475 2.94E-10 T 12-10-2018 IPR036513 STAS domain superfamily CLSA_c16800 786aeee18e9c72f64fe54f390b1e8b4f 487 Pfam PF00916 Sulfate permease family 13 140 4.5E-26 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CLSA_c16800 786aeee18e9c72f64fe54f390b1e8b4f 487 Pfam PF00916 Sulfate permease family 146 352 1.0E-31 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CLSA_c38220 b3c6f2b76851114c2f054bc685b68073 242 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 30 230 2.1E-74 T 12-10-2018 IPR022493 Integral membrane YkoY CLSA_c38220 b3c6f2b76851114c2f054bc685b68073 242 Pfam PF03741 Integral membrane protein TerC family 33 203 1.9E-52 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CLSA_c11390 2c184fc3a3174783afbf3dab1810fd4b 173 SUPERFAMILY SSF53271 3 170 2.36E-53 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c11390 2c184fc3a3174783afbf3dab1810fd4b 173 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 170 8.8E-60 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CLSA_c11390 2c184fc3a3174783afbf3dab1810fd4b 173 Pfam PF00156 Phosphoribosyl transferase domain 9 158 4.8E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c11390 2c184fc3a3174783afbf3dab1810fd4b 173 Gene3D G3DSA:3.40.50.2020 1 173 1.5E-63 T 12-10-2018 CLSA_c26090 152a27a14902d7e0657e249fc52f4ab3 180 Gene3D G3DSA:1.10.357.40 9 180 2.3E-39 T 12-10-2018 IPR037238 YbiA-like superfamily CLSA_c26090 152a27a14902d7e0657e249fc52f4ab3 180 Pfam PF08719 Domain of unknown function (DUF1768) 21 179 2.5E-49 T 12-10-2018 IPR012816 NADAR CLSA_c26090 152a27a14902d7e0657e249fc52f4ab3 180 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 20 179 6.6E-47 T 12-10-2018 IPR012816 NADAR CLSA_c26090 152a27a14902d7e0657e249fc52f4ab3 180 SUPERFAMILY SSF143990 17 179 1.44E-46 T 12-10-2018 IPR037238 YbiA-like superfamily CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 Pfam PF06574 FAD synthetase 12 165 9.6E-48 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 Gene3D G3DSA:3.40.50.620 2 184 1.9E-52 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 SMART SM00904 181 305 4.6E-53 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 301 2.1E-79 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 PIRSF PIRSF004491 1 308 8.9E-105 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 Pfam PF01687 Riboflavin kinase 182 298 3.7E-35 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 SUPERFAMILY SSF82114 172 302 4.58E-44 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 SUPERFAMILY SSF52374 18 173 1.61E-29 T 12-10-2018 CLSA_c14450 1354ca897ecfecd7d5f3b68235f37022 311 Gene3D G3DSA:2.40.30.30 186 302 5.4E-42 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 Pfam PF01820 D-ala D-ala ligase N-terminus 2 84 3.0E-22 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 Gene3D G3DSA:3.30.470.20 83 293 5.4E-71 T 12-10-2018 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 61 72 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 Gene3D G3DSA:3.40.50.20 1 82 3.0E-32 T 12-10-2018 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 SUPERFAMILY SSF56059 94 295 6.75E-50 T 12-10-2018 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 Gene3D G3DSA:3.30.1490.20 109 175 5.4E-71 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 Pfam PF07478 D-ala D-ala ligase C-terminus 101 294 8.9E-52 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 239 267 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 PIRSF PIRSF039102 43 301 1.5E-90 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 PIRSF PIRSF039102 1 49 4.5E-13 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 SUPERFAMILY SSF52440 1 94 1.63E-29 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 297 35.262 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c40500 1ca96ae9b30b714cea60737c5c4b697a 301 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 295 5.1E-93 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c11250 5c3b38ace51f1897bad9c554aa30d6b4 495 SUPERFAMILY SSF51445 3 494 9.59E-172 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c11250 5c3b38ace51f1897bad9c554aa30d6b4 495 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 3 493 7.5E-113 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CLSA_c11250 5c3b38ace51f1897bad9c554aa30d6b4 495 Gene3D G3DSA:3.20.20.80 1 494 8.0E-189 T 12-10-2018 CLSA_c11250 5c3b38ace51f1897bad9c554aa30d6b4 495 Pfam PF02446 4-alpha-glucanotransferase 9 472 1.9E-167 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:2.60.120.560 912 1075 7.7E-18 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:2.60.120.560 1090 1262 7.6E-17 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF01473 Putative cell wall binding repeat 90 106 2.0E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF01473 Putative cell wall binding repeat 48 66 2.4E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF01473 Putative cell wall binding repeat 68 86 2.6E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF01473 Putative cell wall binding repeat 128 146 9.9E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF01473 Putative cell wall binding repeat 109 126 8.0E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 SUPERFAMILY SSF49899 651 815 7.36E-33 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:2.115.10.20 334 654 5.4E-105 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 SMART SM00640 342 776 3.8E-133 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 342 651 2.9E-77 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:2.10.270.10 83 205 1.9E-35 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 SUPERFAMILY SSF69360 28 205 1.1E-52 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 SUPERFAMILY SSF75005 335 652 8.16E-87 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:2.60.120.560 658 816 1.0E-43 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:2.10.270.10 20 82 3.7E-16 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Gene3D G3DSA:1.20.1270.90 246 325 4.1E-18 T 12-10-2018 CLSA_c20680 93b232f1a15ac97bc7b40c4525d55c13 1387 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 654 807 4.6E-32 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 Pfam PF01339 CheB methylesterase 180 356 2.5E-63 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 Gene3D G3DSA:3.40.50.180 173 360 5.4E-71 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 Pfam PF00072 Response regulator receiver domain 6 111 3.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 Gene3D G3DSA:3.40.50.2300 2 142 2.4E-31 T 12-10-2018 CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 361 36.749 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 SUPERFAMILY SSF52738 176 360 1.09E-65 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 PIRSF PIRSF000876 1 363 1.0E-123 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 SUPERFAMILY SSF52172 1 110 5.27E-27 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c39820 ebe8806468ba4fab0532c4e2aa25735f 363 SMART SM00448 4 121 1.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 439 2.5E-112 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 Gene3D G3DSA:1.20.1250.20 2 446 1.0E-129 T 12-10-2018 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 SUPERFAMILY SSF103473 8 440 7.98E-82 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 PRINTS PR00171 Sugar transporter signature 367 379 2.9E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 PRINTS PR00171 Sugar transporter signature 101 120 2.9E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 PRINTS PR00171 Sugar transporter signature 344 365 2.9E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 PRINTS PR00171 Sugar transporter signature 18 28 2.9E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 PRINTS PR00171 Sugar transporter signature 255 265 2.9E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c01570 0f24e0c460c75c35e122d2e5c607a262 457 Pfam PF00083 Sugar (and other) transporter 14 441 5.8E-115 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 Gene3D G3DSA:3.90.1150.10 252 359 5.9E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 PIRSF PIRSF000525 1 360 5.3E-160 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 Gene3D G3DSA:3.40.640.10 17 251 2.6E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 SUPERFAMILY SSF53383 1 357 2.06E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 51.068 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 5.2E-163 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CLSA_c07090 fef1b8fa5c65edb3ca9a21666a38f250 360 Pfam PF00266 Aminotransferase class-V 4 348 2.7E-55 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 Pfam PF03309 Type III pantothenate kinase 2 205 5.1E-73 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 Gene3D G3DSA:3.30.420.40 89 270 1.4E-61 T 12-10-2018 CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 SUPERFAMILY SSF53067 1 121 2.07E-37 T 12-10-2018 CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 255 5.6E-74 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 259 36.515 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 SUPERFAMILY SSF53067 123 258 2.37E-38 T 12-10-2018 CLSA_c01400 f2f5bfd5592aacbef6dbf483ed32c5f1 271 Gene3D G3DSA:3.30.420.40 1 88 5.1E-30 T 12-10-2018 CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 209 245 1.2E-15 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 Gene3D G3DSA:2.10.240.10 209 247 4.4E-14 T 12-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 SUPERFAMILY SSF52343 89 246 7.07E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 SUPERFAMILY SSF63380 4 94 2.69E-16 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 Gene3D G3DSA:2.40.30.10 3 92 7.5E-23 T 12-10-2018 CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 PIRSF PIRSF006816 2 247 8.7E-69 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 Gene3D G3DSA:3.40.50.80 96 208 1.4E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 5 247 35.651 T 12-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit CLSA_c12490 3c5067b8b6e14ba02d408f4c4d883787 247 Pfam PF00175 Oxidoreductase NAD-binding domain 105 193 1.5E-7 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c14780 f7947134644d1448894750252157331d 377 Gene3D G3DSA:3.40.50.1820 8 228 1.3E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c14780 f7947134644d1448894750252157331d 377 SUPERFAMILY SSF53474 61 230 1.13E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 1.2E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.4E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 3.4E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 3.4E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.4E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 SMART SM00418 8 89 5.2E-27 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 Gene3D G3DSA:1.10.10.10 1 95 6.8E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c21760 cac8db521b5a85fc3a834d9a97a761d8 105 SUPERFAMILY SSF46785 2 87 5.86E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 SUPERFAMILY SSF53223 2 100 2.88E-28 T 12-10-2018 CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 Gene3D G3DSA:3.40.50.720 100 232 4.1E-82 T 12-10-2018 CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 261 4.3E-63 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 Gene3D G3DSA:3.40.50.10860 4 248 4.1E-82 T 12-10-2018 CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 8.1E-26 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 264 28.341 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c06850 be4d5e007bb128a48f15ba7259daa024 281 SUPERFAMILY SSF51735 101 261 8.53E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c24510 cf53ce3db1263f54e1e5710cbc970371 234 Gene3D G3DSA:3.40.50.300 2 234 1.6E-56 T 12-10-2018 CLSA_c24510 cf53ce3db1263f54e1e5710cbc970371 234 SUPERFAMILY SSF52540 3 214 2.51E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c24510 cf53ce3db1263f54e1e5710cbc970371 234 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 6 227 3.1E-116 T 12-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit CLSA_c24510 cf53ce3db1263f54e1e5710cbc970371 234 SMART SM00382 30 213 1.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c24510 cf53ce3db1263f54e1e5710cbc970371 234 Pfam PF00005 ABC transporter 22 158 1.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c26590 87e6cf03ab234b4294d69913d901f137 292 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 86 3.1E-14 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLSA_c26590 87e6cf03ab234b4294d69913d901f137 292 Gene3D G3DSA:1.10.150.130 2 93 2.9E-20 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c26590 87e6cf03ab234b4294d69913d901f137 292 Gene3D G3DSA:1.10.443.10 107 282 7.3E-46 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c26590 87e6cf03ab234b4294d69913d901f137 292 Pfam PF00589 Phage integrase family 108 272 4.8E-35 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c26590 87e6cf03ab234b4294d69913d901f137 292 SUPERFAMILY SSF56349 6 280 2.94E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c17770 dbb92cd33a81f04c517ff0a7e3dceb28 191 Gene3D G3DSA:1.10.10.10 1 96 1.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17770 dbb92cd33a81f04c517ff0a7e3dceb28 191 Pfam PF03551 Transcriptional regulator PadR-like family 8 77 9.9E-11 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c17770 dbb92cd33a81f04c517ff0a7e3dceb28 191 Pfam PF10400 Virulence activator alpha C-term 90 173 8.2E-12 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal CLSA_c17770 dbb92cd33a81f04c517ff0a7e3dceb28 191 SUPERFAMILY SSF46785 4 176 9.66E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17840 bdd4be4bb3177722078a5e8f03ff6f76 313 Pfam PF03812 2-keto-3-deoxygluconate permease 5 309 3.2E-99 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c17840 bdd4be4bb3177722078a5e8f03ff6f76 313 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 16 309 3.0E-24 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c26430 375c26edfc42cf3191f2f661c08f6e1d 143 Gene3D G3DSA:2.40.33.20 1 143 1.1E-32 T 12-10-2018 CLSA_c26430 375c26edfc42cf3191f2f661c08f6e1d 143 SUPERFAMILY SSF50800 1 140 2.2E-36 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CLSA_c26430 375c26edfc42cf3191f2f661c08f6e1d 143 Pfam PF03473 MOSC domain 36 139 3.1E-5 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CLSA_c02880 e6b2ceb36e1572a1fa1dc7a76070a4ab 330 SUPERFAMILY SSF53098 212 328 1.02E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c02880 e6b2ceb36e1572a1fa1dc7a76070a4ab 330 Pfam PF00665 Integrase core domain 220 328 4.5E-16 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c02880 e6b2ceb36e1572a1fa1dc7a76070a4ab 330 Pfam PF13276 HTH-like domain 134 189 3.3E-10 T 12-10-2018 IPR025948 HTH-like domain CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 Pfam PF02558 Ketopantoate reductase PanE/ApbA 6 154 2.4E-30 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 308 3.8E-23 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 SUPERFAMILY SSF48179 184 307 3.74E-20 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 5 308 1.5E-58 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 SUPERFAMILY SSF51735 4 185 3.2E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 Gene3D G3DSA:1.10.1040.10 184 310 3.5E-32 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLSA_c21300 ca4ac0d14f1a1660a2aa4743c5a11eb5 311 Gene3D G3DSA:3.40.50.720 1 181 2.7E-47 T 12-10-2018 CLSA_c18410 cf55613f69cda52d4b09f7f999948e35 268 Gene3D G3DSA:3.60.15.10 1 266 1.1E-72 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c18410 cf55613f69cda52d4b09f7f999948e35 268 Pfam PF00753 Metallo-beta-lactamase superfamily 21 88 1.2E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c18410 cf55613f69cda52d4b09f7f999948e35 268 SUPERFAMILY SSF56281 8 244 4.87E-26 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 105 113 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 Gene3D G3DSA:2.160.10.10 281 391 2.8E-23 T 12-10-2018 CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 323 349 3.4E-4 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 9 392 48.488 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 196 206 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 13 365 2.1E-146 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 18 37 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 SUPERFAMILY SSF51161 287 371 2.86E-14 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 SUPERFAMILY SSF53448 7 347 1.58E-84 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 Gene3D G3DSA:3.90.550.10 4 280 3.6E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c43780 4b09d0e1c67d4ad5ac2d99bf63c635ef 392 Pfam PF00483 Nucleotidyl transferase 14 265 2.1E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c40680 4501a135f850556dbeed27fdae7d4eb6 397 SUPERFAMILY SSF103473 7 387 1.23E-47 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c40680 4501a135f850556dbeed27fdae7d4eb6 397 Gene3D G3DSA:1.20.1250.20 208 392 1.2E-20 T 12-10-2018 CLSA_c40680 4501a135f850556dbeed27fdae7d4eb6 397 Pfam PF07690 Major Facilitator Superfamily 14 326 4.9E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c40680 4501a135f850556dbeed27fdae7d4eb6 397 Gene3D G3DSA:1.20.1250.20 3 192 8.1E-22 T 12-10-2018 CLSA_c40680 4501a135f850556dbeed27fdae7d4eb6 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c41100 65dc53fcf921c97fd1ee14ebfa171c6f 104 Gene3D G3DSA:1.20.58.80 1 104 1.4E-40 T 12-10-2018 CLSA_c41100 65dc53fcf921c97fd1ee14ebfa171c6f 104 SUPERFAMILY SSF46973 1 102 1.7E-36 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 CLSA_c41100 65dc53fcf921c97fd1ee14ebfa171c6f 104 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 3.3E-41 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c41100 65dc53fcf921c97fd1ee14ebfa171c6f 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 4.6E-36 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c41100 65dc53fcf921c97fd1ee14ebfa171c6f 104 PIRSF PIRSF000699 1 104 1.2E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CLSA_c13800 33b96761edf3f0e66c98926d4ec49d92 185 PIRSF PIRSF004553 1 184 7.7E-52 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CLSA_c13800 33b96761edf3f0e66c98926d4ec49d92 185 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 181 1.3E-41 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CLSA_c13800 33b96761edf3f0e66c98926d4ec49d92 185 SUPERFAMILY SSF53335 1 181 4.46E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c13800 33b96761edf3f0e66c98926d4ec49d92 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLSA_c13800 33b96761edf3f0e66c98926d4ec49d92 185 Pfam PF03602 Conserved hypothetical protein 95 1 181 3.7E-55 T 12-10-2018 CLSA_c13800 33b96761edf3f0e66c98926d4ec49d92 185 Gene3D G3DSA:3.40.50.150 1 185 3.8E-53 T 12-10-2018 CLSA_c41050 9ecab6705f9cea3a4424f18e2785d7b4 363 SUPERFAMILY SSF51445 35 329 1.52E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c41050 9ecab6705f9cea3a4424f18e2785d7b4 363 Pfam PF07745 Glycosyl hydrolase family 53 39 360 6.0E-105 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 CLSA_c41050 9ecab6705f9cea3a4424f18e2785d7b4 363 Gene3D G3DSA:3.20.20.80 25 355 2.2E-108 T 12-10-2018 CLSA_c26020 77774c5a814c6f0a9bdff3c36a631531 73 SUPERFAMILY SSF50037 5 71 2.81E-18 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal CLSA_c26020 77774c5a814c6f0a9bdff3c36a631531 73 Gene3D G3DSA:2.30.30.90 1 73 1.4E-22 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain CLSA_c26020 77774c5a814c6f0a9bdff3c36a631531 73 SMART SM00899 1 73 1.3E-20 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLSA_c26020 77774c5a814c6f0a9bdff3c36a631531 73 Pfam PF04023 FeoA domain 1 70 4.3E-15 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLSA_c32680 5867957baee133da4a183c54334f494b 299 SUPERFAMILY SSF160240 206 285 1.57E-19 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c32680 5867957baee133da4a183c54334f494b 299 SUPERFAMILY SSF161111 3 203 7.19E-57 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CLSA_c32680 5867957baee133da4a183c54334f494b 299 Gene3D G3DSA:1.20.1510.10 4 201 9.3E-63 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CLSA_c32680 5867957baee133da4a183c54334f494b 299 Gene3D G3DSA:3.30.70.1350 202 290 7.4E-24 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c32680 5867957baee133da4a183c54334f494b 299 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 283 7.3E-22 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CLSA_c32680 5867957baee133da4a183c54334f494b 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 285 2.7E-71 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c32680 5867957baee133da4a183c54334f494b 299 Pfam PF01545 Cation efflux family 9 202 4.2E-50 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c30470 1f50cbb8afe4ccec278d57482dbb9384 282 Hamap MF_00188 Protease HtpX [htpX]. 7 281 27.297 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CLSA_c30470 1f50cbb8afe4ccec278d57482dbb9384 282 Gene3D G3DSA:3.30.2010.10 62 151 8.7E-32 T 12-10-2018 CLSA_c30470 1f50cbb8afe4ccec278d57482dbb9384 282 Pfam PF01435 Peptidase family M48 70 281 9.3E-36 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CLSA_c14730 8fed6148d2ac38b0f9fddcf689042b79 237 SUPERFAMILY SSF56784 21 236 8.67E-59 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c14730 8fed6148d2ac38b0f9fddcf689042b79 237 Gene3D G3DSA:3.40.50.1000 28 227 8.3E-70 T 12-10-2018 IPR023214 HAD superfamily CLSA_c14730 8fed6148d2ac38b0f9fddcf689042b79 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 199 1.6E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c14730 8fed6148d2ac38b0f9fddcf689042b79 237 Gene3D G3DSA:1.10.150.240 39 105 8.3E-70 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLSA_c14730 8fed6148d2ac38b0f9fddcf689042b79 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 28 207 9.0E-35 T 12-10-2018 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 Pfam PF04551 GcpE protein 7 348 1.7E-147 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 SUPERFAMILY SSF56014 261 346 3.76E-13 T 12-10-2018 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3 346 5.8E-136 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 PIRSF PIRSF004640 1 349 2.2E-154 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 Gene3D G3DSA:3.30.413.10 256 349 1.8E-39 T 12-10-2018 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 SUPERFAMILY SSF51717 11 203 2.9E-10 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 Gene3D G3DSA:3.20.20.20 1 255 1.4E-112 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c14360 83d9a1e849d477095572a0fe672ddc8f 349 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 347 34.926 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLSA_c45490 52e0b971958cbd50b8822c9cb8d9946f 252 Pfam PF02096 60Kd inner membrane protein 32 213 1.1E-52 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CLSA_c45490 52e0b971958cbd50b8822c9cb8d9946f 252 PRINTS PR00701 60kDa inner membrane protein signature 139 161 2.2E-9 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CLSA_c45490 52e0b971958cbd50b8822c9cb8d9946f 252 PRINTS PR00701 60kDa inner membrane protein signature 93 116 2.2E-9 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CLSA_c45490 52e0b971958cbd50b8822c9cb8d9946f 252 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 31 213 1.1E-57 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 SUPERFAMILY SSF55785 225 336 2.09E-18 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 SMART SM00267 334 502 4.2E-41 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Pfam PF07694 5TMR of 5TMR-LYT 29 189 1.4E-17 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Gene3D G3DSA:3.30.70.270 344 499 4.8E-38 T 12-10-2018 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Gene3D G3DSA:3.30.450.20 210 343 8.1E-22 T 12-10-2018 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 496 3.1E-34 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Pfam PF13487 HD domain 571 632 4.2E-20 T 12-10-2018 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 SUPERFAMILY SSF109604 513 679 1.04E-33 T 12-10-2018 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Gene3D G3DSA:1.10.3210.10 500 682 4.2E-64 T 12-10-2018 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 4.5E-37 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 Pfam PF08448 PAS fold 227 335 3.1E-14 T 12-10-2018 IPR013656 PAS fold-4 CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 SMART SM00091 220 286 0.0018 T 12-10-2018 IPR000014 PAS domain CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 SMART SM00471 515 650 1.1E-10 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 SUPERFAMILY SSF55073 350 496 7.85E-34 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c21450 f2027a42a56ed423ed601cbb1d3c7854 683 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 218 340 1.1E-16 T 12-10-2018 IPR000014 PAS domain CLSA_c15740 32069c73fff73f40f6e905e9a2d1afbb 188 SUPERFAMILY SSF47240 1 184 9.74E-69 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c15740 32069c73fff73f40f6e905e9a2d1afbb 188 Pfam PF05067 Manganese containing catalase 1 183 1.7E-59 T 12-10-2018 IPR007760 Manganese catalase CLSA_c15740 32069c73fff73f40f6e905e9a2d1afbb 188 Gene3D G3DSA:1.20.1260.10 1 186 1.5E-62 T 12-10-2018 IPR012347 Ferritin-like CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 SMART SM00862 147 222 4.8E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 SUPERFAMILY SSF46894 127 222 5.95E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 SMART SM00448 2 112 2.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 SUPERFAMILY SSF52172 1 124 1.42E-34 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 Gene3D G3DSA:1.10.10.10 125 223 1.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 Pfam PF00072 Response regulator receiver domain 4 112 4.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 Gene3D G3DSA:3.40.50.2300 1 124 1.6E-30 T 12-10-2018 CLSA_c38900 77c03b32a05527cb223aed1de2b31939 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 3.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c32060 6517a13d381ac825183d110d8d93b7fc 276 Pfam PF02361 Cobalt transport protein 13 233 2.4E-29 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 Gene3D G3DSA:1.10.10.10 157 237 4.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 Gene3D G3DSA:2.60.120.10 11 156 1.8E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 SMART SM00100 23 144 9.9E-23 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 9.4E-10 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 9.4E-10 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 SUPERFAMILY SSF46785 158 237 8.91E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 Pfam PF00027 Cyclic nucleotide-binding domain 42 129 1.2E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 Pfam PF13545 Crp-like helix-turn-helix domain 162 236 1.6E-19 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 SMART SM00419 180 229 3.9E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 ProSitePatterns PS00042 Crp-type HTH domain signature. 188 211 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CLSA_c37970 bdb9d087c8175e97b7b94e8a79262d3c 237 SUPERFAMILY SSF51206 19 156 4.58E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c18400 f6462aba5dae2e5ad01c400bb73e6dde 210 Gene3D G3DSA:2.160.10.10 2 210 9.7E-65 T 12-10-2018 CLSA_c18400 f6462aba5dae2e5ad01c400bb73e6dde 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLSA_c18400 f6462aba5dae2e5ad01c400bb73e6dde 210 SUPERFAMILY SSF51161 19 208 8.04E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c18400 f6462aba5dae2e5ad01c400bb73e6dde 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 152 8.1E-9 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c16900 1fd69db61ff4e83d416eadf9403a9349 246 SUPERFAMILY SSF53474 17 240 1.5E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c16900 1fd69db61ff4e83d416eadf9403a9349 246 Pfam PF00975 Thioesterase domain 20 241 1.9E-44 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CLSA_c16900 1fd69db61ff4e83d416eadf9403a9349 246 Gene3D G3DSA:3.40.50.1820 20 245 7.9E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 SUPERFAMILY SSF46894 127 228 4.82E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 7.7E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 SMART SM00448 2 112 1.6E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 SUPERFAMILY SSF52172 3 128 1.57E-40 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 Gene3D G3DSA:3.40.50.2300 2 127 1.2E-37 T 12-10-2018 CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 SMART SM00862 151 227 3.1E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 Pfam PF00072 Response regulator receiver domain 4 113 2.3E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c19730 269169d99b69b3f1b9bd044979d60c86 230 Gene3D G3DSA:1.10.10.10 128 230 2.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c31580 3564a2a910ae16b1869184affaa12d09 164 Gene3D G3DSA:2.40.440.10 43 164 3.4E-21 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c31580 3564a2a910ae16b1869184affaa12d09 164 Pfam PF03734 L,D-transpeptidase catalytic domain 44 163 1.9E-12 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLSA_c31580 3564a2a910ae16b1869184affaa12d09 164 SUPERFAMILY SSF141523 40 163 2.35E-21 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c22110 0d35d7dcdf451725bfe9aa26ceb1bf5c 163 Pfam PF03830 PTS system sorbose subfamily IIB component 3 150 2.5E-53 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CLSA_c22110 0d35d7dcdf451725bfe9aa26ceb1bf5c 163 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 4.6E-55 T 12-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CLSA_c22110 0d35d7dcdf451725bfe9aa26ceb1bf5c 163 Gene3D G3DSA:3.40.35.10 1 163 4.8E-58 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c22110 0d35d7dcdf451725bfe9aa26ceb1bf5c 163 SUPERFAMILY SSF52728 1 161 2.09E-54 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 Gene3D G3DSA:3.30.70.20 78 137 6.9E-11 T 12-10-2018 CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 SUPERFAMILY SSF53920 120 418 2.09E-73 T 12-10-2018 IPR009016 Iron hydrogenase CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 152 390 2.9E-59 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 Pfam PF13187 4Fe-4S dicluster domain 94 134 3.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 120 131 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 SUPERFAMILY SSF54862 94 139 1.94E-12 T 12-10-2018 CLSA_c26140 74c2295c2f52228cea45d5383396f949 449 Gene3D G3DSA:3.40.950.20 191 421 4.7E-39 T 12-10-2018 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 Pfam PF00175 Oxidoreductase NAD-binding domain 127 230 5.6E-13 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 126 145 1.1E-11 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 104 118 1.1E-11 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 41 51 1.1E-11 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 Gene3D G3DSA:2.40.30.10 13 117 1.7E-28 T 12-10-2018 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 SUPERFAMILY SSF63380 13 118 9.5E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 Pfam PF00970 Oxidoreductase FAD-binding domain 35 116 2.4E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 SUPERFAMILY SSF52343 119 249 1.19E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c37940 5b9bb5e76b015a9baf08c606a677cdb3 258 Gene3D G3DSA:3.40.50.80 119 253 3.8E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c33070 a34528c039a9be1fb0e1325b7cb748f2 333 Gene3D G3DSA:3.40.47.40 1 333 2.7E-151 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily CLSA_c33070 a34528c039a9be1fb0e1325b7cb748f2 333 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 1.0E-158 T 12-10-2018 IPR010894 Stage V sporulation AD CLSA_c33070 a34528c039a9be1fb0e1325b7cb748f2 333 PIRSF PIRSF011570 1 333 7.2E-159 T 12-10-2018 IPR010894 Stage V sporulation AD CLSA_c33070 a34528c039a9be1fb0e1325b7cb748f2 333 SUPERFAMILY SSF53901 56 252 3.24E-17 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c33070 a34528c039a9be1fb0e1325b7cb748f2 333 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 4.6E-154 T 12-10-2018 IPR010894 Stage V sporulation AD CLSA_c13600 6606526c2e9c8f2c1c379fc7a2d38d53 293 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 293 3.3E-76 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 CLSA_c13600 6606526c2e9c8f2c1c379fc7a2d38d53 293 Pfam PF08340 Domain of unknown function (DUF1732) 210 293 2.2E-35 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 CLSA_c13600 6606526c2e9c8f2c1c379fc7a2d38d53 293 Pfam PF03755 YicC-like family, N-terminal region 2 157 5.4E-44 T 12-10-2018 IPR013527 YicC-like, N-terminal CLSA_c00360 104ffa6583fbbc8b384a160b20296fce 566 SUPERFAMILY SSF52540 239 416 7.59E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00360 104ffa6583fbbc8b384a160b20296fce 566 Pfam PF09818 Predicted ATPase of the ABC class 6 437 5.6E-186 T 12-10-2018 IPR019195 ABC transporter, ATPase, putative CLSA_c00360 104ffa6583fbbc8b384a160b20296fce 566 Gene3D G3DSA:3.40.50.300 243 442 4.2E-6 T 12-10-2018 CLSA_c03760 707bec18286b6d68a9110b5b9f9cdaf9 348 SUPERFAMILY SSF53850 43 345 3.01E-57 T 12-10-2018 CLSA_c03760 707bec18286b6d68a9110b5b9f9cdaf9 348 Gene3D G3DSA:3.40.190.10 45 316 1.6E-77 T 12-10-2018 CLSA_c03760 707bec18286b6d68a9110b5b9f9cdaf9 348 Gene3D G3DSA:3.40.190.10 143 324 1.6E-77 T 12-10-2018 CLSA_c03760 707bec18286b6d68a9110b5b9f9cdaf9 348 PIRSF PIRSF002825 2 348 1.7E-50 T 12-10-2018 IPR026045 Ferric binding protein CLSA_c03760 707bec18286b6d68a9110b5b9f9cdaf9 348 Pfam PF13343 Bacterial extracellular solute-binding protein 89 306 1.4E-37 T 12-10-2018 CLSA_c35350 3427ee652ab0627175dc614535bf43c8 77 Pfam PF10779 Haemolysin XhlA 6 70 9.2E-27 T 12-10-2018 IPR019715 Haemolysin XhlA CLSA_c10750 f66b4daeaf76c02eb6fcb6a5514e9bc9 87 Pfam PF01649 Ribosomal protein S20 2 84 3.9E-28 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c10750 f66b4daeaf76c02eb6fcb6a5514e9bc9 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.9E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c10750 f66b4daeaf76c02eb6fcb6a5514e9bc9 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.661 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c10750 f66b4daeaf76c02eb6fcb6a5514e9bc9 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 15 71 4.0E-15 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c10750 f66b4daeaf76c02eb6fcb6a5514e9bc9 87 SUPERFAMILY SSF46992 3 86 3.92E-28 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c10750 f66b4daeaf76c02eb6fcb6a5514e9bc9 87 Gene3D G3DSA:1.20.58.110 1 87 4.9E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c21630 f71d817db43aba0dd57da963280a8279 293 Pfam PF00990 Diguanylate cyclase, GGDEF domain 126 287 1.2E-45 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21630 f71d817db43aba0dd57da963280a8279 293 Gene3D G3DSA:3.30.70.270 111 288 7.8E-53 T 12-10-2018 CLSA_c21630 f71d817db43aba0dd57da963280a8279 293 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 122 290 2.8E-48 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21630 f71d817db43aba0dd57da963280a8279 293 SMART SM00267 115 291 2.8E-59 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21630 f71d817db43aba0dd57da963280a8279 293 SUPERFAMILY SSF55073 131 291 7.85E-46 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c15470 4064b710c7bb096d887babe30ce44fdf 313 Gene3D G3DSA:3.60.15.10 2 303 3.4E-72 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c15470 4064b710c7bb096d887babe30ce44fdf 313 SUPERFAMILY SSF56281 4 302 3.93E-64 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c15470 4064b710c7bb096d887babe30ce44fdf 313 Pfam PF00753 Metallo-beta-lactamase superfamily 21 88 1.8E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c15470 4064b710c7bb096d887babe30ce44fdf 313 Hamap MF_01818 Ribonuclease BN [rbn]. 2 303 32.517 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CLSA_c15470 4064b710c7bb096d887babe30ce44fdf 313 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 4 301 1.0E-98 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 SUPERFAMILY SSF90123 3 316 7.72E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 SUPERFAMILY SSF52540 325 570 5.68E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 Gene3D G3DSA:3.40.50.300 322 575 4.8E-83 T 12-10-2018 CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 SMART SM00382 359 545 6.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 Pfam PF00005 ABC transporter 350 499 2.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 Gene3D G3DSA:1.20.1560.10 1 315 1.8E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c44330 ffe4baa25498753db3b47203635f9a53 579 Pfam PF00664 ABC transporter transmembrane region 21 284 8.2E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c33020 56487253d0fdff01d393e7decfa223eb 243 Pfam PF04239 Protein of unknown function (DUF421) 88 205 9.3E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 CLSA_c33020 56487253d0fdff01d393e7decfa223eb 243 Gene3D G3DSA:3.30.240.20 80 154 1.4E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c33020 56487253d0fdff01d393e7decfa223eb 243 Gene3D G3DSA:3.30.240.20 170 230 7.9E-19 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c18610 470625d526c3159322600ca7f98f039a 413 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 64 79 2.4E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 14 34 2.4E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 81 99 2.4E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 SUPERFAMILY SSF52540 13 183 2.11E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c18610 470625d526c3159322600ca7f98f039a 413 Pfam PF01926 50S ribosome-binding GTPase 14 128 7.4E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 167 1.1E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 Gene3D G3DSA:3.40.50.300 4 181 1.8E-43 T 12-10-2018 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 5 397 1.1E-174 T 12-10-2018 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF CLSA_c18610 470625d526c3159322600ca7f98f039a 413 Gene3D G3DSA:3.40.50.11420 183 291 7.9E-43 T 12-10-2018 CLSA_c18610 470625d526c3159322600ca7f98f039a 413 Gene3D G3DSA:3.40.50.11410 292 400 1.7E-44 T 12-10-2018 CLSA_c32770 eb30da8c0365ee9864d7b6c3b86558db 275 SUPERFAMILY SSF52540 3 236 3.16E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32770 eb30da8c0365ee9864d7b6c3b86558db 275 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 15 201 1.3E-63 T 12-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 CLSA_c32770 eb30da8c0365ee9864d7b6c3b86558db 275 Gene3D G3DSA:3.40.50.300 2 272 3.6E-68 T 12-10-2018 CLSA_c32770 eb30da8c0365ee9864d7b6c3b86558db 275 SMART SM00382 31 216 2.3E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c32770 eb30da8c0365ee9864d7b6c3b86558db 275 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c32770 eb30da8c0365ee9864d7b6c3b86558db 275 Pfam PF00005 ABC transporter 22 168 1.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c16170 f16cfa51224338a28a91466cb0b7b370 184 PIRSF PIRSF016661 1 183 3.4E-45 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLSA_c16170 f16cfa51224338a28a91466cb0b7b370 184 Gene3D G3DSA:1.10.1760.20 1 178 4.5E-50 T 12-10-2018 CLSA_c16170 f16cfa51224338a28a91466cb0b7b370 184 Pfam PF02632 BioY family 28 173 2.7E-34 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 Gene3D G3DSA:3.40.1160.10 1 284 2.2E-93 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 Pfam PF00696 Amino acid kinase family 23 262 5.2E-42 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 TIGRFAM TIGR00761 argB: acetylglutamate kinase 24 260 2.7E-79 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 PRINTS PR00474 Glutamate 5-kinase family signature 182 209 7.6E-9 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 PRINTS PR00474 Glutamate 5-kinase family signature 235 255 7.6E-9 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 PRINTS PR00474 Glutamate 5-kinase family signature 54 68 7.6E-9 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 SUPERFAMILY SSF53633 3 284 8.77E-89 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 PIRSF PIRSF000728 7 284 1.2E-111 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c07160 c6dd95842788a073d8df88328cf70735 284 Hamap MF_00082 Acetylglutamate kinase [argB]. 22 278 48.647 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLSA_c33500 d8ad740b2226c72a394ec7f2014702bd 175 SUPERFAMILY SSF52218 2 148 2.1E-18 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c33500 d8ad740b2226c72a394ec7f2014702bd 175 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLSA_c33500 d8ad740b2226c72a394ec7f2014702bd 175 Gene3D G3DSA:3.40.50.360 4 154 6.4E-14 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c33500 d8ad740b2226c72a394ec7f2014702bd 175 Pfam PF12724 Flavodoxin domain 5 139 1.4E-21 T 12-10-2018 IPR026816 Flavodoxin domain CLSA_c17510 33ae40f1e931f7c015de6dfcdfc95120 139 SUPERFAMILY SSF55961 9 104 1.83E-10 T 12-10-2018 CLSA_c33490 d0442323a2fc33a3221449aa8099b2b0 327 Gene3D G3DSA:1.20.58.340 250 327 6.6E-13 T 12-10-2018 CLSA_c33490 d0442323a2fc33a3221449aa8099b2b0 327 Gene3D G3DSA:3.30.460.20 6 133 4.9E-30 T 12-10-2018 CLSA_c33490 d0442323a2fc33a3221449aa8099b2b0 327 Pfam PF01544 CorA-like Mg2+ transporter protein 30 319 2.1E-63 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLSA_c33490 d0442323a2fc33a3221449aa8099b2b0 327 SUPERFAMILY SSF144083 261 320 2.88E-11 T 12-10-2018 CLSA_c33490 d0442323a2fc33a3221449aa8099b2b0 327 Gene3D G3DSA:1.20.58.340 134 246 7.8E-26 T 12-10-2018 CLSA_c33490 d0442323a2fc33a3221449aa8099b2b0 327 SUPERFAMILY SSF143865 19 258 2.88E-49 T 12-10-2018 CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 Pfam PF05193 Peptidase M16 inactive domain 165 338 2.7E-35 T 12-10-2018 IPR007863 Peptidase M16, C-terminal CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 Gene3D G3DSA:3.30.830.10 1 216 8.9E-74 T 12-10-2018 CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 Gene3D G3DSA:3.30.830.10 228 412 3.0E-40 T 12-10-2018 CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 1.5E-43 T 12-10-2018 IPR011765 Peptidase M16, N-terminal CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 SUPERFAMILY SSF63411 231 407 3.17E-35 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c14480 3412dce4b1e8a6aeff01b191a85a77cf 434 SUPERFAMILY SSF63411 3 205 2.1E-61 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c18350 76e555e4ce9b429beb981e7e15356d67 266 Gene3D G3DSA:3.30.390.50 163 261 1.3E-9 T 12-10-2018 CLSA_c18350 76e555e4ce9b429beb981e7e15356d67 266 SUPERFAMILY SSF55447 163 262 8.24E-11 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CLSA_c18350 76e555e4ce9b429beb981e7e15356d67 266 SUPERFAMILY SSF56176 6 157 1.58E-24 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c18350 76e555e4ce9b429beb981e7e15356d67 266 Gene3D G3DSA:3.30.465.10 5 161 1.1E-19 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CLSA_c18350 76e555e4ce9b429beb981e7e15356d67 266 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 174 259 5.9E-7 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLSA_c18350 76e555e4ce9b429beb981e7e15356d67 266 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 7 147 7.1E-18 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CLSA_c33620 d19f02fe04a98fd194b49bbf1e17dbf1 221 SUPERFAMILY SSF100950 9 220 1.9E-68 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c33620 d19f02fe04a98fd194b49bbf1e17dbf1 221 SMART SM00882 10 205 1.0E-61 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c33620 d19f02fe04a98fd194b49bbf1e17dbf1 221 Gene3D G3DSA:3.40.1080.10 4 217 4.4E-86 T 12-10-2018 CLSA_c33620 d19f02fe04a98fd194b49bbf1e17dbf1 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 9 212 6.0E-92 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CLSA_c33620 d19f02fe04a98fd194b49bbf1e17dbf1 221 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 48 56 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CLSA_c33620 d19f02fe04a98fd194b49bbf1e17dbf1 221 Pfam PF01144 Coenzyme A transferase 11 203 5.6E-36 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 Pfam PF08439 Oligopeptidase F 113 182 2.7E-21 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 Gene3D G3DSA:1.10.1370.20 227 594 8.3E-134 T 12-10-2018 CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 Gene3D G3DSA:1.20.140.70 25 178 9.9E-47 T 12-10-2018 CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 SUPERFAMILY SSF55486 6 580 2.08E-120 T 12-10-2018 CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 Gene3D G3DSA:1.10.287.830 180 225 1.9E-19 T 12-10-2018 CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 592 2.8E-193 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 CLSA_c40000 f434f2c8a33ad16338d0a179d545f4a5 594 Pfam PF01432 Peptidase family M3 205 582 2.0E-72 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CLSA_c08610 645e82c15601cec6ba88f8d4bdacde60 235 Gene3D G3DSA:1.10.3720.10 5 233 2.8E-47 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c08610 645e82c15601cec6ba88f8d4bdacde60 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 126 7.0E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CLSA_c08610 645e82c15601cec6ba88f8d4bdacde60 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 232 4.2E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c08610 645e82c15601cec6ba88f8d4bdacde60 235 SUPERFAMILY SSF161098 19 217 3.66E-40 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c11160 ff21a0da0829b574d3eb8c89f5c87636 314 SUPERFAMILY SSF53474 78 312 4.16E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c11160 ff21a0da0829b574d3eb8c89f5c87636 314 Gene3D G3DSA:3.40.50.1820 57 313 4.8E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c41220 1983c0230d3665cec71b7a2918d4d0f5 365 Gene3D G3DSA:3.40.50.2000 162 341 1.3E-76 T 12-10-2018 CLSA_c41220 1983c0230d3665cec71b7a2918d4d0f5 365 Gene3D G3DSA:3.40.50.2000 20 354 1.3E-76 T 12-10-2018 CLSA_c41220 1983c0230d3665cec71b7a2918d4d0f5 365 Pfam PF00534 Glycosyl transferases group 1 165 335 2.1E-42 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c41220 1983c0230d3665cec71b7a2918d4d0f5 365 Pfam PF13477 Glycosyl transferase 4-like 2 140 4.5E-38 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c41220 1983c0230d3665cec71b7a2918d4d0f5 365 SUPERFAMILY SSF53756 14 360 1.17E-73 T 12-10-2018 CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 SUPERFAMILY SSF52218 1 135 5.55E-17 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 Pfam PF13187 4Fe-4S dicluster domain 188 232 1.5E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 SUPERFAMILY SSF54862 187 236 2.09E-16 T 12-10-2018 CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 Gene3D G3DSA:3.30.70.20 177 240 3.4E-13 T 12-10-2018 CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 217 228 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 Gene3D G3DSA:3.40.50.360 1 131 7.7E-11 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c34330 cc0fa9a081493c659f7c06e74a306e4b 248 Pfam PF00258 Flavodoxin 2 107 6.9E-6 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 PRINTS PR00354 7Fe ferredoxin signature 86 103 2.2E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 PRINTS PR00354 7Fe ferredoxin signature 68 78 2.2E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 PRINTS PR00354 7Fe ferredoxin signature 58 68 2.2E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 Pfam PF13247 4Fe-4S dicluster domain 50 144 1.7E-24 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 Gene3D G3DSA:3.30.70.20 1 148 2.9E-35 T 12-10-2018 CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 Pfam PF12800 4Fe-4S binding domain 10 24 0.059 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 SUPERFAMILY SSF54862 10 147 6.7E-49 T 12-10-2018 CLSA_c40280 1a4a2b72a2325432c143bd9fb046ecfc 148 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 Gene3D G3DSA:3.40.50.300 8 336 1.6E-102 T 12-10-2018 CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 Gene3D G3DSA:1.20.1050.90 120 303 1.6E-102 T 12-10-2018 CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 90.055 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 SUPERFAMILY SSF52540 1 359 1.03E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 1.3E-100 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLSA_c00040 a52049237d92a3896885e01f9e37c9bd 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 334 1.1E-12 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 31 73 0.007 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 Gene3D G3DSA:1.10.1200.10 1 76 7.8E-28 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 73 2.5E-30 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 Pfam PF00550 Phosphopantetheine attachment site 3 70 3.2E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 SUPERFAMILY SSF47336 2 74 1.31E-22 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 ProSitePatterns PS00012 Phosphopantetheine attachment site. 29 44 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site CLSA_c13900 bd30ae120faf1fa2cb6219b220bbeede 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 74 19.546 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CLSA_c17610 221ed63ee0f5bd5de596ecacff8c77e0 248 SMART SM01001 119 248 1.7E-33 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLSA_c17610 221ed63ee0f5bd5de596ecacff8c77e0 248 Gene3D G3DSA:3.40.50.7700 120 248 1.5E-34 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CLSA_c17610 221ed63ee0f5bd5de596ecacff8c77e0 248 SUPERFAMILY SSF52255 119 247 5.89E-29 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CLSA_c17610 221ed63ee0f5bd5de596ecacff8c77e0 248 Pfam PF00731 AIR carboxylase 121 243 5.5E-16 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLSA_c17090 706f62845cf07cb387ab1883a41209eb 257 Gene3D G3DSA:3.40.50.1820 1 256 6.2E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c17090 706f62845cf07cb387ab1883a41209eb 257 SUPERFAMILY SSF53474 6 119 1.5E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 3.9E-6 T 12-10-2018 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 3.9E-6 T 12-10-2018 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 3.9E-6 T 12-10-2018 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 3.9E-6 T 12-10-2018 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 SUPERFAMILY SSF103473 4 540 3.4E-76 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 439 4.3E-96 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 Pfam PF07690 Major Facilitator Superfamily 13 405 1.4E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 Gene3D G3DSA:1.20.1720.10 10 218 5.6E-50 T 12-10-2018 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c34420 8fc085b8bc6574234cfcfa8c6b7d7af2 557 Gene3D G3DSA:1.20.1250.20 259 457 2.4E-19 T 12-10-2018 CLSA_c07060 2e6c3ea785a8de512d6e52ee570cb2fa 654 PIRSF PIRSF000906 3 649 0.0 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLSA_c07060 2e6c3ea785a8de512d6e52ee570cb2fa 654 SUPERFAMILY SSF56300 186 246 3.98E-7 T 12-10-2018 CLSA_c07060 2e6c3ea785a8de512d6e52ee570cb2fa 654 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 9 647 0.0 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLSA_c07060 2e6c3ea785a8de512d6e52ee570cb2fa 654 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 7 648 40.252 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 111 123 3.9E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 95 111 3.9E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 81 95 3.9E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 SMART SM00421 78 135 4.2E-4 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 187 254 4.5E-27 T 12-10-2018 IPR018656 Domain of unknown function DUF2087 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 SUPERFAMILY SSF46894 67 127 2.75E-10 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 Pfam PF00196 Bacterial regulatory proteins, luxR family 85 122 1.0E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLSA_c19580 2381c70cef6bf6f181207ad91cb7934c 256 Gene3D G3DSA:1.10.10.10 76 133 1.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 Pfam PF02384 N-6 DNA Methylase 193 346 1.4E-27 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 242 256 1.6E-11 T 12-10-2018 CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 232 1.6E-11 T 12-10-2018 CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 330 1.6E-11 T 12-10-2018 CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 SUPERFAMILY SSF53335 28 332 1.63E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 321 327 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLSA_c09060 21e3d466f5914129d733efdb7f42df2f 375 Gene3D G3DSA:3.40.50.150 190 371 2.0E-30 T 12-10-2018 CLSA_c41110 40fa31bfbbb46ab2585b16f56e65f21a 172 Pfam PF02502 Ribose/Galactose Isomerase 3 141 9.0E-40 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41110 40fa31bfbbb46ab2585b16f56e65f21a 172 PIRSF PIRSF005384 1 148 4.5E-45 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41110 40fa31bfbbb46ab2585b16f56e65f21a 172 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 144 2.9E-36 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41110 40fa31bfbbb46ab2585b16f56e65f21a 172 SUPERFAMILY SSF89623 1 147 2.62E-44 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41110 40fa31bfbbb46ab2585b16f56e65f21a 172 Gene3D G3DSA:3.40.1400.10 1 172 1.4E-52 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 Pfam PF00005 ABC transporter 23 173 1.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 SUPERFAMILY SSF52540 6 231 3.94E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 SUPERFAMILY SSF52540 268 485 1.05E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 Gene3D G3DSA:3.40.50.300 3 240 7.3E-55 T 12-10-2018 CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 Pfam PF00005 ABC transporter 279 432 7.9E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 SMART SM00382 287 479 0.011 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 SMART SM00382 32 221 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c07500 0e0886f2752dc77b14e4b47c5cec092f 505 Gene3D G3DSA:3.40.50.300 243 501 2.8E-46 T 12-10-2018 CLSA_c37730 fdf41dcefa345098a3b97fe7eb3eef08 178 TIGRFAM TIGR01295 PedC_BrcD: putative bacteriocin transport accessory protein 54 174 2.6E-41 T 12-10-2018 IPR005985 Bacteriocin transport accessory protein GO:0030152 CLSA_c37730 fdf41dcefa345098a3b97fe7eb3eef08 178 SUPERFAMILY SSF52833 54 171 7.66E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c37730 fdf41dcefa345098a3b97fe7eb3eef08 178 Gene3D G3DSA:3.40.30.10 49 173 3.4E-24 T 12-10-2018 CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 SUPERFAMILY SSF46785 7 143 5.05E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 Pfam PF01047 MarR family 33 90 8.3E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 SMART SM00347 26 126 7.4E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 Gene3D G3DSA:1.10.10.10 3 142 3.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c37520 005651932958538180cf4abe0cd5ae5f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 SMART SM00448 1 112 4.4E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 Pfam PF04397 LytTr DNA-binding domain 142 238 2.0E-30 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 Gene3D G3DSA:3.40.50.2300 1 131 3.8E-31 T 12-10-2018 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 SMART SM00850 141 239 2.2E-35 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 Gene3D G3DSA:2.40.50.40 132 201 1.6E-18 T 12-10-2018 CLSA_c19700 1e07ca0a01d3eec00e3a2eb5a500a98f 240 SUPERFAMILY SSF52172 2 122 1.99E-25 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c45430 f77661d39e89f9338d575a11fe7522d2 253 PIRSF PIRSF009320 88 251 4.2E-8 T 12-10-2018 CLSA_c45430 f77661d39e89f9338d575a11fe7522d2 253 PIRSF PIRSF009320 1 77 1.4E-12 T 12-10-2018 CLSA_c45430 f77661d39e89f9338d575a11fe7522d2 253 Pfam PF13614 AAA domain 1 178 2.7E-68 T 12-10-2018 IPR025669 AAA domain CLSA_c45430 f77661d39e89f9338d575a11fe7522d2 253 Gene3D G3DSA:3.40.50.300 1 253 1.4E-79 T 12-10-2018 CLSA_c45430 f77661d39e89f9338d575a11fe7522d2 253 SUPERFAMILY SSF52540 1 252 4.41E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32050 e900854426026a66f66544b38a954b37 176 Gene3D G3DSA:3.40.50.300 1 175 4.5E-62 T 12-10-2018 CLSA_c32050 e900854426026a66f66544b38a954b37 176 PIRSF PIRSF015617 1 176 2.9E-52 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CLSA_c32050 e900854426026a66f66544b38a954b37 176 SUPERFAMILY SSF52540 2 175 1.28E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32050 e900854426026a66f66544b38a954b37 176 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 4 175 1.1E-60 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 CLSA_c43100 ea28a94aec00f64f7eeec92707484998 284 Gene3D G3DSA:3.30.70.120 194 268 2.5E-25 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c43100 ea28a94aec00f64f7eeec92707484998 284 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 216 1.3E-59 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c43100 ea28a94aec00f64f7eeec92707484998 284 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 4.5E-18 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 CLSA_c43100 ea28a94aec00f64f7eeec92707484998 284 PIRSF PIRSF006483 1 283 7.0E-84 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 Hamap MF_00163 Peptide deformylase [def]. 2 146 27.258 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 Gene3D G3DSA:3.90.45.10 1 146 2.4E-57 T 12-10-2018 IPR036821 Peptide deformylase superfamily CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 Pfam PF01327 Polypeptide deformylase 4 145 8.8E-49 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 PRINTS PR01576 Peptide deformylase signature 98 116 4.3E-34 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 PRINTS PR01576 Peptide deformylase signature 86 97 4.3E-34 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 PRINTS PR01576 Peptide deformylase signature 117 146 4.3E-34 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 PRINTS PR01576 Peptide deformylase signature 33 62 4.3E-34 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 SUPERFAMILY SSF56420 3 145 1.96E-55 T 12-10-2018 IPR036821 Peptide deformylase superfamily CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 PIRSF PIRSF004749 1 146 8.1E-51 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c13660 02cf5f3e7a8b7e2889e65aed5190e7f1 146 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 145 2.5E-45 T 12-10-2018 IPR023635 Peptide deformylase CLSA_c31300 2e83ce1b8d43e47859278cd19f812eee 240 Pfam PF00977 Histidine biosynthesis protein 3 227 3.0E-77 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CLSA_c31300 2e83ce1b8d43e47859278cd19f812eee 240 Gene3D G3DSA:3.20.20.70 1 237 1.2E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c31300 2e83ce1b8d43e47859278cd19f812eee 240 SUPERFAMILY SSF51366 1 234 3.3E-73 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c31300 2e83ce1b8d43e47859278cd19f812eee 240 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 232 1.1E-81 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CLSA_c31300 2e83ce1b8d43e47859278cd19f812eee 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 235 35.575 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CLSA_c18550 bfcb8b368e99f3078eab383ec1a826f8 121 Gene3D G3DSA:3.40.30.10 1 116 6.5E-45 T 12-10-2018 CLSA_c18550 bfcb8b368e99f3078eab383ec1a826f8 121 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 114 5.1E-31 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR CLSA_c18550 bfcb8b368e99f3078eab383ec1a826f8 121 SUPERFAMILY SSF52833 6 111 6.42E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c18550 bfcb8b368e99f3078eab383ec1a826f8 121 Pfam PF03960 ArsC family 50 109 1.4E-10 T 12-10-2018 IPR006660 Arsenate reductase-like CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 Pfam PF08274 PhnA Zinc-Ribbon 4 31 6.0E-16 T 12-10-2018 IPR013987 PhnA protein, N-terminal CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 Pfam PF03831 PhnA domain 46 113 1.1E-35 T 12-10-2018 IPR013988 PhnA protein, C-terminal CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 SUPERFAMILY SSF82057 41 113 1.46E-29 T 12-10-2018 CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 112 5.9E-50 T 12-10-2018 IPR004624 PhnA protein CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 Gene3D G3DSA:2.30.30.40 43 113 1.1E-36 T 12-10-2018 CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 Gene3D G3DSA:2.20.25.10 1 42 4.4E-20 T 12-10-2018 CLSA_c38150 fbaa3a69517b9cbc2f795486911c924c 113 SUPERFAMILY SSF57783 3 36 1.87E-14 T 12-10-2018 CLSA_c05500 4a82c56d27d61d9e1cd46a611888f9a0 315 Pfam PF00892 EamA-like transporter family 169 303 2.1E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c05500 4a82c56d27d61d9e1cd46a611888f9a0 315 Pfam PF00892 EamA-like transporter family 13 155 3.3E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c05500 4a82c56d27d61d9e1cd46a611888f9a0 315 SUPERFAMILY SSF103481 54 158 9.15E-14 T 12-10-2018 CLSA_c05500 4a82c56d27d61d9e1cd46a611888f9a0 315 SUPERFAMILY SSF103481 204 305 5.36E-11 T 12-10-2018 CLSA_c22620 9e160e34657dff5dd38da6b3750c1ba8 429 PIRSF PIRSF005353 1 429 8.6E-174 T 12-10-2018 IPR026033 Purine permease PbuG-like CLSA_c22620 9e160e34657dff5dd38da6b3750c1ba8 429 Pfam PF00860 Permease family 18 389 3.4E-37 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 180 5.2E-21 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 Pfam PF04542 Sigma-70 region 2 28 92 3.2E-7 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 SUPERFAMILY SSF88946 3 111 7.46E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 Gene3D G3DSA:1.10.1740.10 5 89 1.1E-10 T 12-10-2018 CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 Pfam PF08281 Sigma-70, region 4 125 176 2.0E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 Gene3D G3DSA:1.10.10.10 98 182 3.0E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37470 bfc931bd8c2b1ce7e67834eb7a848ba3 184 SUPERFAMILY SSF88659 105 181 2.62E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 Hamap MF_00542 Probable butyrate kinase [buk]. 1 356 164.768 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 SUPERFAMILY SSF53067 122 348 2.76E-55 T 12-10-2018 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 Gene3D G3DSA:3.30.420.40 137 332 1.6E-158 T 12-10-2018 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 179 196 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 Pfam PF00871 Acetokinase family 4 352 3.6E-75 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 SUPERFAMILY SSF53067 3 172 2.16E-69 T 12-10-2018 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 Gene3D G3DSA:3.30.420.40 5 355 1.6E-158 T 12-10-2018 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 PIRSF PIRSF036458 1 356 2.6E-169 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 PRINTS PR00471 Acetate kinase family signature 274 287 7.0E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 PRINTS PR00471 Acetate kinase family signature 179 200 7.0E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 PRINTS PR00471 Acetate kinase family signature 297 313 7.0E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 PRINTS PR00471 Acetate kinase family signature 5 16 7.0E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLSA_c32200 cfb8ccf93483e283b1601da6552ad10a 356 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 4 353 2.3E-168 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLSA_c28980 00c1759deada03451ac0979158ae1f12 266 Gene3D G3DSA:1.10.3810.10 76 260 6.0E-79 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c28980 00c1759deada03451ac0979158ae1f12 266 SUPERFAMILY SSF53955 70 263 1.83E-64 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c28980 00c1759deada03451ac0979158ae1f12 266 Pfam PF00912 Transglycosylase 70 242 1.7E-58 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c06470 3f5fca8c7a1e2c62657d22950e5c4030 427 Gene3D G3DSA:1.10.260.150 59 348 6.1E-75 T 12-10-2018 CLSA_c06470 3f5fca8c7a1e2c62657d22950e5c4030 427 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 337 422 2.1E-13 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CLSA_c06470 3f5fca8c7a1e2c62657d22950e5c4030 427 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 91 244 9.5E-35 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain CLSA_c06470 3f5fca8c7a1e2c62657d22950e5c4030 427 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 91 243 2.7E-37 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 Pfam PF13411 MerR HTH family regulatory protein 3 69 5.0E-24 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 SUPERFAMILY SSF46955 3 115 1.65E-32 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.7E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.7E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.7E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 SMART SM00422 3 71 4.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c35880 3d488476a901de6f68fddafd22c88b5b 127 Gene3D G3DSA:1.10.1660.10 1 126 1.2E-36 T 12-10-2018 CLSA_c10690 f6cd1a9b714e58968eaa19d9984cc87f 155 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 148 2.1E-39 T 12-10-2018 IPR005562 SpoVA CLSA_c10690 f6cd1a9b714e58968eaa19d9984cc87f 155 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 151 2.9E-57 T 12-10-2018 IPR014203 Sporulation stage V, protein AC CLSA_c19590 62524ce296d3693aad7f32827a36e942 338 Gene3D G3DSA:3.30.200.20 3 104 2.2E-8 T 12-10-2018 CLSA_c19590 62524ce296d3693aad7f32827a36e942 338 Gene3D G3DSA:3.90.1200.10 118 327 7.4E-6 T 12-10-2018 CLSA_c19590 62524ce296d3693aad7f32827a36e942 338 Pfam PF01636 Phosphotransferase enzyme family 27 242 3.4E-8 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase CLSA_c19590 62524ce296d3693aad7f32827a36e942 338 SUPERFAMILY SSF56112 7 331 5.1E-36 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c03290 db02c0c82eb227e1fe541db38aceb82b 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.68 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLSA_c03290 db02c0c82eb227e1fe541db38aceb82b 159 Pfam PF02542 YgbB family 1 154 6.1E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLSA_c03290 db02c0c82eb227e1fe541db38aceb82b 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLSA_c03290 db02c0c82eb227e1fe541db38aceb82b 159 SUPERFAMILY SSF69765 1 156 3.53E-64 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLSA_c03290 db02c0c82eb227e1fe541db38aceb82b 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 2.7E-69 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLSA_c03290 db02c0c82eb227e1fe541db38aceb82b 159 Gene3D G3DSA:3.30.1330.50 1 158 5.7E-67 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLSA_c17200 db56e59313cfa85819c319d29fc3a112 243 Pfam PF02915 Rubrerythrin 22 93 7.8E-6 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLSA_c17200 db56e59313cfa85819c319d29fc3a112 243 Gene3D G3DSA:1.20.1260.10 6 147 1.4E-7 T 12-10-2018 IPR012347 Ferritin-like CLSA_c17200 db56e59313cfa85819c319d29fc3a112 243 SUPERFAMILY SSF47240 18 146 1.96E-19 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c35590 7b46048d3afc91800c66e05ab6770e20 250 Pfam PF17289 Terminase RNaseH-like domain 68 211 8.1E-5 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like CLSA_c35590 7b46048d3afc91800c66e05ab6770e20 250 Gene3D G3DSA:3.30.420.280 33 220 9.8E-40 T 12-10-2018 CLSA_c35590 7b46048d3afc91800c66e05ab6770e20 250 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 1 216 1.6E-32 T 12-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 CLSA_c30690 d2cec646e2428149a54ff6a6e2b51fa4 178 Gene3D G3DSA:1.10.1760.20 1 170 1.3E-8 T 12-10-2018 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 SMART SM00354 4 73 5.3E-22 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 Pfam PF13377 Periplasmic binding protein-like domain 169 326 3.0E-28 T 12-10-2018 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 Gene3D G3DSA:3.40.50.2300 67 308 2.1E-61 T 12-10-2018 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 Gene3D G3DSA:1.10.260.40 1 60 5.6E-16 T 12-10-2018 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 SUPERFAMILY SSF47413 3 61 1.77E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 SUPERFAMILY SSF53822 60 320 6.23E-61 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 9.7E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 CLSA_c44290 35fdd446afe06ffd8a49027d43e27acb 332 Gene3D G3DSA:3.40.50.2300 164 285 2.1E-61 T 12-10-2018 CLSA_c32790 1e58087c0e88676d9ad9142243df4851 385 Gene3D G3DSA:3.20.20.140 58 344 1.6E-107 T 12-10-2018 CLSA_c32790 1e58087c0e88676d9ad9142243df4851 385 Pfam PF07969 Amidohydrolase family 268 382 6.1E-16 T 12-10-2018 IPR013108 Amidohydrolase 3 CLSA_c32790 1e58087c0e88676d9ad9142243df4851 385 SUPERFAMILY SSF51556 57 347 2.57E-39 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c32790 1e58087c0e88676d9ad9142243df4851 385 Gene3D G3DSA:2.30.40.10 7 378 1.6E-107 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c32790 1e58087c0e88676d9ad9142243df4851 385 SUPERFAMILY SSF51338 4 382 2.67E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c06480 fefad54c7d80494e1bc87b42c348564c 303 Gene3D G3DSA:3.30.2350.10 79 303 6.4E-73 T 12-10-2018 CLSA_c06480 fefad54c7d80494e1bc87b42c348564c 303 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 298 6.0E-78 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c06480 fefad54c7d80494e1bc87b42c348564c 303 SUPERFAMILY SSF55120 71 299 1.4E-69 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c06480 fefad54c7d80494e1bc87b42c348564c 303 Pfam PF00849 RNA pseudouridylate synthase 87 239 4.7E-34 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 Gene3D G3DSA:1.20.1270.20 1 161 2.7E-43 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 PIRSF PIRSF000076 3 567 1.0E-271 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 Hamap MF_00069 Hydroxylamine reductase [hcp]. 3 566 24.193 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 Gene3D G3DSA:1.20.1270.20 162 245 2.6E-31 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 Pfam PF03063 Prismane/CO dehydrogenase family 3 562 9.9E-188 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 3 564 7.8E-234 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 Gene3D G3DSA:3.40.50.2030 247 395 6.3E-68 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 SUPERFAMILY SSF56821 1 564 1.44E-211 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 CLSA_c38000 dd5cdadd6fa904a66672c6daa26fdb33 567 Gene3D G3DSA:3.40.50.2030 396 565 8.4E-65 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c36330 2039edb91131fc6099c92bf5ec51bcf4 315 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 309 1.2E-14 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA CLSA_c36330 2039edb91131fc6099c92bf5ec51bcf4 315 Pfam PF04754 Putative transposase, YhgA-like 9 211 2.7E-35 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like CLSA_c21770 3f6c731d78e4f24c08ed0b9a1b31b25e 137 Gene3D G3DSA:3.40.50.2300 2 134 4.3E-35 T 12-10-2018 CLSA_c21770 3f6c731d78e4f24c08ed0b9a1b31b25e 137 SMART SM00226 3 128 2.2E-18 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CLSA_c21770 3f6c731d78e4f24c08ed0b9a1b31b25e 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 125 6.9E-15 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CLSA_c21770 3f6c731d78e4f24c08ed0b9a1b31b25e 137 SUPERFAMILY SSF52788 4 126 9.81E-28 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CLSA_c01780 d2df7bd7d6688b8eade58e9e80b8d6dd 224 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 221 1.8E-68 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLSA_c01780 d2df7bd7d6688b8eade58e9e80b8d6dd 224 SUPERFAMILY SSF53448 1 223 1.71E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c01780 d2df7bd7d6688b8eade58e9e80b8d6dd 224 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 223 4.8E-59 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLSA_c01780 d2df7bd7d6688b8eade58e9e80b8d6dd 224 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 222 39.128 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLSA_c01780 d2df7bd7d6688b8eade58e9e80b8d6dd 224 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLSA_c01780 d2df7bd7d6688b8eade58e9e80b8d6dd 224 Gene3D G3DSA:3.90.550.10 1 224 7.1E-72 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c12000 04ac7144a529d6a5be54423a0dbb9e2e 346 Gene3D G3DSA:3.40.190.10 39 132 4.5E-13 T 12-10-2018 CLSA_c12000 04ac7144a529d6a5be54423a0dbb9e2e 346 Gene3D G3DSA:3.40.190.10 154 343 1.2E-32 T 12-10-2018 CLSA_c12000 04ac7144a529d6a5be54423a0dbb9e2e 346 Pfam PF09084 NMT1/THI5 like 52 263 2.0E-21 T 12-10-2018 IPR015168 SsuA/THI5-like CLSA_c12000 04ac7144a529d6a5be54423a0dbb9e2e 346 SUPERFAMILY SSF53850 46 264 5.91E-35 T 12-10-2018 CLSA_c43930 6534ab65e37f00ba57ce1a20ea106484 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 227 9.9E-52 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c43930 6534ab65e37f00ba57ce1a20ea106484 230 Gene3D G3DSA:3.40.50.1580 1 228 4.5E-67 T 12-10-2018 CLSA_c43930 6534ab65e37f00ba57ce1a20ea106484 230 Pfam PF01048 Phosphorylase superfamily 2 227 2.3E-51 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLSA_c43930 6534ab65e37f00ba57ce1a20ea106484 230 SUPERFAMILY SSF53167 1 228 9.3E-66 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CLSA_c25700 5acc185b2a10055cc168aa536e0b7925 329 SUPERFAMILY SSF52218 1 211 2.1E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c25700 5acc185b2a10055cc168aa536e0b7925 329 Gene3D G3DSA:3.40.50.360 2 232 3.5E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c25700 5acc185b2a10055cc168aa536e0b7925 329 Pfam PF03358 NADPH-dependent FMN reductase 1 159 2.5E-21 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c02760 7fd16abd3f08fb2778fdabc92770864c 390 SUPERFAMILY SSF56300 78 334 4.55E-44 T 12-10-2018 CLSA_c02760 7fd16abd3f08fb2778fdabc92770864c 390 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 78 309 2.1E-57 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA CLSA_c02760 7fd16abd3f08fb2778fdabc92770864c 390 Gene3D G3DSA:3.60.21.10 142 361 3.0E-9 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c02760 7fd16abd3f08fb2778fdabc92770864c 390 SMART SM00854 77 310 8.3E-79 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 51 4.0E-16 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 PIRSF PIRSF000774 1 463 6.4E-151 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 351 370 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 Gene3D G3DSA:1.10.10.1330 108 234 1.3E-24 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 442 449 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 Gene3D G3DSA:1.10.10.60 404 461 1.6E-23 T 12-10-2018 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 Pfam PF04552 Sigma-54, DNA binding domain 304 462 3.1E-58 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 461 1.1E-133 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 PRINTS PR00045 Sigma-54 factor signature 363 375 6.4E-18 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 PRINTS PR00045 Sigma-54 factor signature 437 455 6.4E-18 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 PRINTS PR00045 Sigma-54 factor signature 379 390 6.4E-18 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 PRINTS PR00045 Sigma-54 factor signature 175 192 6.4E-18 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CLSA_c40450 66afac7f30bd40447ae6d81f80309350 463 Pfam PF04963 Sigma-54 factor, core binding domain 104 290 2.5E-50 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 CLSA_c20320 fcd3e3c8abee64e0febad5c73880928b 141 PIRSF PIRSF033736 1 141 1.7E-48 T 12-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 CLSA_c20320 fcd3e3c8abee64e0febad5c73880928b 141 Gene3D G3DSA:3.40.1490.10 5 139 4.6E-12 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 CLSA_c20320 fcd3e3c8abee64e0febad5c73880928b 141 Pfam PF09391 Protein of unknown function (DUF2000) 7 141 1.2E-48 T 12-10-2018 IPR018988 Protein of unknown function DUF2000 CLSA_c20320 fcd3e3c8abee64e0febad5c73880928b 141 SUPERFAMILY SSF102462 5 141 4.97E-44 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 Gene3D G3DSA:3.20.80.10 134 294 3.5E-20 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 Pfam PF12833 Helix-turn-helix domain 29 105 6.2E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 SUPERFAMILY SSF46689 8 56 1.28E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 SUPERFAMILY SSF55136 137 293 3.4E-14 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 SMART SM00871 133 293 1.8E-13 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 Gene3D G3DSA:1.10.10.60 59 115 6.1E-13 T 12-10-2018 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 Gene3D G3DSA:1.10.10.60 1 58 2.9E-20 T 12-10-2018 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 Pfam PF14526 Integron-associated effector binding protein 141 288 1.4E-12 T 12-10-2018 IPR029441 Integron-associated effector binding protein CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 SMART SM00342 22 105 6.6E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c25620 293cd58343b21040c601b3dd4f241e3e 295 SUPERFAMILY SSF46689 59 109 1.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c12180 ca8145e4348c4d0cd089afe5667c4ce8 240 Gene3D G3DSA:3.40.50.880 15 205 4.3E-12 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c12180 ca8145e4348c4d0cd089afe5667c4ce8 240 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 4 198 2.2E-44 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CLSA_c12180 ca8145e4348c4d0cd089afe5667c4ce8 240 SUPERFAMILY SSF52317 14 194 1.1E-28 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c18380 6ed2fef62ac3c2687783c87335a4a2d9 347 Pfam PF02625 XdhC and CoxI family 261 321 1.7E-18 T 12-10-2018 IPR003777 XdhC- CoxI CLSA_c18380 6ed2fef62ac3c2687783c87335a4a2d9 347 Pfam PF13478 XdhC Rossmann domain 92 234 3.2E-40 T 12-10-2018 IPR027051 XdhC Rossmann domain CLSA_c18380 6ed2fef62ac3c2687783c87335a4a2d9 347 Gene3D G3DSA:3.40.50.720 91 257 4.1E-52 T 12-10-2018 CLSA_c40690 9f7c59184266cfd5450d34722c9d68e4 155 Gene3D G3DSA:3.40.1550.10 1 154 1.1E-40 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c40690 9f7c59184266cfd5450d34722c9d68e4 155 SUPERFAMILY SSF103039 5 151 3.14E-29 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c40690 9f7c59184266cfd5450d34722c9d68e4 155 Pfam PF13690 Chemotaxis phosphatase CheX 42 137 1.5E-13 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CLSA_c29100 d21fad2ac3ed0908e6fe35c764298f34 714 Pfam PF09299 Mu transposase, C-terminal 516 579 6.7E-8 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal CLSA_c29100 d21fad2ac3ed0908e6fe35c764298f34 714 Gene3D G3DSA:3.30.420.10 281 488 8.3E-12 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c29100 d21fad2ac3ed0908e6fe35c764298f34 714 SUPERFAMILY SSF53098 291 425 2.02E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c29100 d21fad2ac3ed0908e6fe35c764298f34 714 Pfam PF00665 Integrase core domain 285 421 1.9E-11 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 256 520 5.2E-68 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 SUPERFAMILY SSF53850 256 523 1.88E-68 T 12-10-2018 CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 201 3.6E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 Gene3D G3DSA:1.10.3720.10 12 208 4.3E-32 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 Gene3D G3DSA:3.40.190.120 360 463 5.3E-94 T 12-10-2018 CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 Gene3D G3DSA:3.40.190.10 259 519 5.3E-94 T 12-10-2018 CLSA_c14690 71edb4141276d566451fac34cc1dfa40 524 SUPERFAMILY SSF161098 14 195 3.53E-37 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c08620 2934aa15725be29786556304e8d56774 407 Pfam PF13556 PucR C-terminal helix-turn-helix domain 344 402 2.6E-21 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain CLSA_c08620 2934aa15725be29786556304e8d56774 407 Pfam PF07905 Purine catabolism regulatory protein-like family 7 130 2.3E-29 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain CLSA_c08620 2934aa15725be29786556304e8d56774 407 Gene3D G3DSA:1.10.10.2840 274 406 1.1E-17 T 12-10-2018 CLSA_c39850 02e39b7a5833b90cb9d18d1ab4486da0 652 Pfam PF03961 Flagellar Assembly Protein A 141 522 1.2E-64 T 12-10-2018 IPR005646 Flagellar assembly protein A CLSA_c39850 02e39b7a5833b90cb9d18d1ab4486da0 652 SMART SM01245 4 51 0.0074 T 12-10-2018 IPR032782 Jag, N-terminal CLSA_c28280 577590a80688545c3caba66045ad5850 117 SUPERFAMILY SSF160148 43 115 2.35E-27 T 12-10-2018 IPR036593 CPE0013-like superfamily CLSA_c28280 577590a80688545c3caba66045ad5850 117 Gene3D G3DSA:3.10.530.10 44 112 8.8E-25 T 12-10-2018 IPR036593 CPE0013-like superfamily CLSA_c28280 577590a80688545c3caba66045ad5850 117 Pfam PF07892 Protein of unknown function (DUF1667) 31 112 5.5E-35 T 12-10-2018 IPR012460 Protein of unknown function DUF1667 CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Gene3D G3DSA:3.80.10.10 22 201 8.1E-23 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 SUPERFAMILY SSF69360 199 384 1.81E-47 T 12-10-2018 CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Pfam PF01473 Putative cell wall binding repeat 326 339 0.27 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Pfam PF01473 Putative cell wall binding repeat 267 283 2.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Pfam PF01473 Putative cell wall binding repeat 286 303 0.51 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Gene3D G3DSA:2.10.270.10 209 262 8.6E-12 T 12-10-2018 CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Gene3D G3DSA:2.10.270.10 263 303 5.3E-12 T 12-10-2018 CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Gene3D G3DSA:2.10.270.10 304 381 2.1E-17 T 12-10-2018 CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 SUPERFAMILY SSF52058 99 225 1.28E-17 T 12-10-2018 CLSA_c17400 9add685c21f64ee220da88c8a1b2248f 534 Gene3D G3DSA:3.90.1720.10 382 503 6.1E-7 T 12-10-2018 CLSA_c18200 59a276c63af7ece8f2657386cde4de0f 119 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 90 2.0E-11 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CLSA_c18200 59a276c63af7ece8f2657386cde4de0f 119 Gene3D G3DSA:2.30.110.10 2 118 1.5E-25 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c18200 59a276c63af7ece8f2657386cde4de0f 119 SUPERFAMILY SSF50475 7 106 1.18E-21 T 12-10-2018 CLSA_c15730 5f082acf8bf3fa9d17f13a47865f1c86 179 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLSA_c15730 5f082acf8bf3fa9d17f13a47865f1c86 179 SUPERFAMILY SSF55811 14 141 9.88E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c15730 5f082acf8bf3fa9d17f13a47865f1c86 179 Pfam PF00293 NUDIX domain 22 145 2.1E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c15730 5f082acf8bf3fa9d17f13a47865f1c86 179 Gene3D G3DSA:3.90.79.10 8 155 5.6E-25 T 12-10-2018 CLSA_c00470 714f4b6480ab53129123e0861b3396e5 369 SUPERFAMILY SSF109604 137 305 4.19E-40 T 12-10-2018 CLSA_c00470 714f4b6480ab53129123e0861b3396e5 369 SMART SM00471 139 275 3.9E-12 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c00470 714f4b6480ab53129123e0861b3396e5 369 Gene3D G3DSA:1.10.3210.10 3 307 9.5E-83 T 12-10-2018 CLSA_c00470 714f4b6480ab53129123e0861b3396e5 369 Pfam PF01966 HD domain 143 265 8.8E-18 T 12-10-2018 IPR006674 HD domain CLSA_c12730 900be39421814b249f110a077b80f555 65 Pfam PF04070 Domain of unknown function (DUF378) 2 59 1.3E-25 T 12-10-2018 IPR007211 Protein of unknown function DUF378 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 9.4E-7 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 9.4E-7 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Pfam PF13932 GidA associated domain 405 619 4.6E-77 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 SUPERFAMILY SSF51905 12 265 7.65E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 12 625 3.0E-271 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 SMART SM01228 549 620 3.9E-40 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 372 395 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Gene3D G3DSA:1.10.10.1800 463 553 6.0E-20 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.6E-5 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 3.6E-5 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Pfam PF01134 Glucose inhibited division protein A 13 403 3.5E-165 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 10 627 41.947 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Gene3D G3DSA:3.50.50.60 4 243 7.1E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Gene3D G3DSA:3.50.50.60 308 462 9.5E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 Gene3D G3DSA:1.10.150.570 573 624 1.1E-23 T 12-10-2018 CLSA_c45460 63d99dacfeb3d1229a185f0fdc1df9f0 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 277 291 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CLSA_c30040 baf161af194e3d179e0a91ebf82a6a1d 327 SUPERFAMILY SSF102114 103 197 3.14E-6 T 12-10-2018 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 SUPERFAMILY SSF55874 439 584 4.06E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 582 2.3E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Gene3D G3DSA:3.30.565.10 443 587 1.6E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 SUPERFAMILY SSF158472 319 369 7.72E-10 T 12-10-2018 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Gene3D G3DSA:1.10.287.130 315 442 3.9E-9 T 12-10-2018 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Pfam PF02743 Cache domain 47 279 9.9E-21 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 SMART SM00304 318 370 3.8E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Gene3D G3DSA:3.30.450.20 175 295 3.8E-13 T 12-10-2018 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Pfam PF06580 Histidine kinase 382 461 6.6E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLSA_c07530 7e4257f2bb069ce10d1a2d11dcc63f14 587 Pfam PF00672 HAMP domain 318 365 6.9E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c38380 6c924408394ce9b6c7fda061603203a3 281 Pfam PF01261 Xylose isomerase-like TIM barrel 26 232 3.4E-30 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CLSA_c38380 6c924408394ce9b6c7fda061603203a3 281 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 279 3.9E-93 T 12-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CLSA_c38380 6c924408394ce9b6c7fda061603203a3 281 Gene3D G3DSA:3.20.20.150 1 279 2.2E-66 T 12-10-2018 CLSA_c38380 6c924408394ce9b6c7fda061603203a3 281 SUPERFAMILY SSF51658 4 277 4.32E-42 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily CLSA_c16760 cc02b4538b3f25f145fc785e5dcfa93a 166 Pfam PF00583 Acetyltransferase (GNAT) family 38 133 9.4E-13 T 12-10-2018 IPR000182 GNAT domain CLSA_c16760 cc02b4538b3f25f145fc785e5dcfa93a 166 SUPERFAMILY SSF55729 1 158 1.25E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c16760 cc02b4538b3f25f145fc785e5dcfa93a 166 Gene3D G3DSA:3.40.630.30 2 161 1.2E-35 T 12-10-2018 CLSA_c01200 3bb4f6f944a8708d32c973a6f38aa90c 86 PIRSF PIRSF038881 1 86 2.4E-31 T 12-10-2018 IPR025490 RNA-binding protein, HP1423 type CLSA_c01200 3bb4f6f944a8708d32c973a6f38aa90c 86 SMART SM00363 1 61 5.7E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c01200 3bb4f6f944a8708d32c973a6f38aa90c 86 Gene3D G3DSA:3.10.290.10 1 86 1.1E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c01200 3bb4f6f944a8708d32c973a6f38aa90c 86 Pfam PF01479 S4 domain 1 47 3.4E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c01200 3bb4f6f944a8708d32c973a6f38aa90c 86 SUPERFAMILY SSF55174 1 77 1.31E-20 T 12-10-2018 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 SUPERFAMILY SSF56014 98 256 6.67E-40 T 12-10-2018 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 29 88 3.6E-19 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 290 351 5.6E-7 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 366 471 1.4 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Gene3D G3DSA:3.30.413.10 362 496 1.0E-21 T 12-10-2018 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 PRINTS PR00397 Sirohaem Fe-binding site signature 409 427 2.9E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 PRINTS PR00397 Sirohaem Fe-binding site signature 363 381 2.9E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Gene3D G3DSA:3.30.413.10 97 279 5.4E-83 T 12-10-2018 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 98 249 1.8E-33 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 SUPERFAMILY SSF55124 11 96 7.52E-23 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 SUPERFAMILY SSF56014 364 482 3.4E-19 T 12-10-2018 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 SUPERFAMILY SSF55124 229 374 5.56E-9 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c25270 e2b97e24910e8dec6ec6985ed056906e 521 Gene3D G3DSA:3.90.480.10 30 348 5.4E-83 T 12-10-2018 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 113 144 6.0E-13 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 Gene3D G3DSA:3.90.79.10 146 273 2.5E-38 T 12-10-2018 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 SUPERFAMILY SSF55811 16 116 5.68E-9 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 ProSitePatterns PS00893 Nudix box signature. 179 200 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 Pfam PF00293 NUDIX domain 149 253 2.1E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 Gene3D G3DSA:3.90.79.20 10 145 4.2E-26 T 12-10-2018 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 19 111 2.6E-6 T 12-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CLSA_c37410 fb63eb7460fedb8848b90026624cd0e7 275 SUPERFAMILY SSF55811 100 257 5.55E-39 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c23580 4ddb1c8dee3de8ca617c13488d2c7a06 238 Gene3D G3DSA:3.20.20.70 11 238 1.0E-52 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c23580 4ddb1c8dee3de8ca617c13488d2c7a06 238 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 13 212 4.9E-33 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CLSA_c23580 4ddb1c8dee3de8ca617c13488d2c7a06 238 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 11 236 29.819 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CLSA_c23580 4ddb1c8dee3de8ca617c13488d2c7a06 238 SUPERFAMILY SSF51366 12 234 9.57E-41 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 Gene3D G3DSA:1.10.1060.10 9 140 1.5E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 2.4E-19 T 12-10-2018 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 PRINTS PR00419 Adrenodoxin reductase family signature 285 299 2.4E-19 T 12-10-2018 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 PRINTS PR00419 Adrenodoxin reductase family signature 209 219 2.4E-19 T 12-10-2018 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 2.4E-19 T 12-10-2018 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 PRINTS PR00419 Adrenodoxin reductase family signature 318 331 2.4E-19 T 12-10-2018 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 130 1.2E-42 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 SUPERFAMILY SSF46548 7 151 1.78E-34 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 143 449 9.4E-30 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 SUPERFAMILY SSF51971 141 394 8.83E-65 T 12-10-2018 CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 Gene3D G3DSA:3.50.50.60 281 464 1.8E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 Gene3D G3DSA:3.50.50.60 141 280 2.7E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c08810 d3adcc63ad29ea2c72679498e2533314 464 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 17 461 2.9E-171 T 12-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 9 588 1.1E-230 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 9 590 33.261 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 127 564 4.3E-109 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 SUPERFAMILY SSF55681 116 590 6.08E-106 T 12-10-2018 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 1.0E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 216 229 1.0E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 211 1.0E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 1.0E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Gene3D G3DSA:2.40.50.140 5 113 1.2E-29 T 12-10-2018 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Gene3D G3DSA:3.30.930.10 125 587 2.6E-190 T 12-10-2018 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 ProDom PD609240 SUBUNIT E AMIDOTRANSFERASE 6.3.5.- LIGASE GLUTAMYL-TRNAGLN GLU-ADT BIOSYNTHESIS TRANSFERASE B 301 420 0.008 T 12-10-2018 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 SUPERFAMILY SSF55261 298 424 4.25E-41 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Gene3D G3DSA:3.30.1360.30 281 424 2.6E-190 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Pfam PF01336 OB-fold nucleic acid binding domain 27 109 6.1E-14 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 Pfam PF02938 GAD domain 317 409 9.8E-28 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CLSA_c28640 d2bd12e9e6c249cf95eea50b054811cb 599 SUPERFAMILY SSF50249 8 116 2.36E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 SUPERFAMILY SSF100950 10 250 1.23E-79 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 SUPERFAMILY SSF100950 252 518 1.61E-62 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 Gene3D G3DSA:3.40.1080.10 254 519 2.6E-126 T 12-10-2018 CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 Gene3D G3DSA:3.40.1080.10 7 253 3.0E-106 T 12-10-2018 CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 PIRSF PIRSF009451 7 519 5.5E-261 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 35 519 1.0E-249 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CLSA_c34850 5744c646f985bc1e041cd6b56a5e0fee 519 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 53 518 1.5E-239 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CLSA_c12080 507f54704b59dac62138463d39700f14 249 Gene3D G3DSA:3.20.20.370 15 239 3.7E-50 T 12-10-2018 CLSA_c12080 507f54704b59dac62138463d39700f14 249 SUPERFAMILY SSF88713 23 236 2.31E-38 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c12080 507f54704b59dac62138463d39700f14 249 Pfam PF01522 Polysaccharide deacetylase 31 142 2.3E-19 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c24840 1030994253d25dfc0ca5805595ba7d50 332 Gene3D G3DSA:1.20.120.940 143 317 2.1E-47 T 12-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily CLSA_c24840 1030994253d25dfc0ca5805595ba7d50 332 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 147 312 4.5E-51 T 12-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal CLSA_c24840 1030994253d25dfc0ca5805595ba7d50 332 Pfam PF06081 Aromatic acid exporter family member 1 7 142 3.4E-35 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 CLSA_c10740 0bedb2e6fb60d23c65c2c99c446a79cb 353 SUPERFAMILY SSF52540 23 224 3.4E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10740 0bedb2e6fb60d23c65c2c99c446a79cb 353 Gene3D G3DSA:3.40.50.300 16 155 1.1E-27 T 12-10-2018 CLSA_c10740 0bedb2e6fb60d23c65c2c99c446a79cb 353 Pfam PF06144 DNA polymerase III, delta subunit 29 205 5.4E-42 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CLSA_c10740 0bedb2e6fb60d23c65c2c99c446a79cb 353 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 29 346 7.4E-49 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CLSA_c10740 0bedb2e6fb60d23c65c2c99c446a79cb 353 SUPERFAMILY SSF48019 230 346 7.14E-18 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CLSA_c10740 0bedb2e6fb60d23c65c2c99c446a79cb 353 Gene3D G3DSA:1.20.272.10 226 352 4.0E-24 T 12-10-2018 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 Gene3D G3DSA:3.40.190.290 90 290 3.1E-38 T 12-10-2018 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 Gene3D G3DSA:1.10.10.10 1 83 1.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 SUPERFAMILY SSF53850 90 287 5.74E-26 T 12-10-2018 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 Pfam PF03466 LysR substrate binding domain 89 286 5.8E-27 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 8.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c18570 69f722b72d28692a8e90d525eeae1a5f 292 SUPERFAMILY SSF46785 2 86 1.2E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 Gene3D G3DSA:1.20.1510.10 30 224 1.1E-55 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 SUPERFAMILY SSF160240 314 387 5.89E-6 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 302 1.9E-61 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 Gene3D G3DSA:3.30.70.1350 226 308 2.5E-17 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 Pfam PF16916 Dimerisation domain of Zinc Transporter 229 304 3.6E-14 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 SUPERFAMILY SSF160240 227 305 8.89E-18 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 SUPERFAMILY SSF161111 29 225 1.44E-51 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CLSA_c42610 2aa918386c88ca62e210d44dc90992ae 391 Pfam PF01545 Cation efflux family 32 224 1.4E-47 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLSA_c14710 0bf3c73d9c9c3d4fffb8fde0194fd59c 180 Gene3D G3DSA:1.20.1260.10 53 178 3.6E-24 T 12-10-2018 IPR012347 Ferritin-like CLSA_c14710 0bf3c73d9c9c3d4fffb8fde0194fd59c 180 SUPERFAMILY SSF47240 54 179 6.03E-32 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c14710 0bf3c73d9c9c3d4fffb8fde0194fd59c 180 Gene3D G3DSA:2.20.28.10 1 36 2.5E-16 T 12-10-2018 CLSA_c14710 0bf3c73d9c9c3d4fffb8fde0194fd59c 180 Pfam PF02915 Rubrerythrin 61 174 4.4E-13 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLSA_c14710 0bf3c73d9c9c3d4fffb8fde0194fd59c 180 SUPERFAMILY SSF57802 1 44 1.62E-11 T 12-10-2018 CLSA_c08280 b2b09a3eca3ea00a5fe2ef8fd01fe349 150 Gene3D G3DSA:3.10.450.50 8 137 4.0E-8 T 12-10-2018 CLSA_c08280 b2b09a3eca3ea00a5fe2ef8fd01fe349 150 Pfam PF17117 Domain of unknown function (DUF5104) 19 124 5.1E-30 T 12-10-2018 IPR031344 Protein of unknown function DUF5104 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 Gene3D G3DSA:1.20.1250.20 4 446 3.4E-124 T 12-10-2018 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 438 3.2E-106 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 SUPERFAMILY SSF103473 1 439 3.66E-72 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 Pfam PF00083 Sugar (and other) transporter 12 440 3.6E-108 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 PRINTS PR00171 Sugar transporter signature 343 364 7.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 PRINTS PR00171 Sugar transporter signature 101 120 7.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 PRINTS PR00171 Sugar transporter signature 18 28 7.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 PRINTS PR00171 Sugar transporter signature 366 378 7.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c07620 b4a8c13e9ad92f05182a1eeaa5e5598b 454 PRINTS PR00171 Sugar transporter signature 253 263 7.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c42280 ae103cabd4496820ee697f1a69074ffb 301 Pfam PF00483 Nucleotidyl transferase 2 238 5.4E-69 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c42280 ae103cabd4496820ee697f1a69074ffb 301 SUPERFAMILY SSF53448 1 287 8.23E-87 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42280 ae103cabd4496820ee697f1a69074ffb 301 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.9E-144 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CLSA_c42280 ae103cabd4496820ee697f1a69074ffb 301 Gene3D G3DSA:3.90.550.10 1 292 2.0E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c45100 25ee4516d16f6e9f44c45d6793edd4aa 422 Gene3D G3DSA:3.65.10.10 21 230 1.6E-162 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CLSA_c45100 25ee4516d16f6e9f44c45d6793edd4aa 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.2E-167 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c45100 25ee4516d16f6e9f44c45d6793edd4aa 422 SUPERFAMILY SSF55205 1 418 2.45E-137 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLSA_c45100 25ee4516d16f6e9f44c45d6793edd4aa 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 9.2E-102 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CLSA_c45100 25ee4516d16f6e9f44c45d6793edd4aa 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 42.776 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c45100 25ee4516d16f6e9f44c45d6793edd4aa 422 Gene3D G3DSA:3.65.10.10 6 414 1.6E-162 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CLSA_c10890 2f60c0cb72265cee2e4c6e81f14b7053 314 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 5 311 1.9E-106 T 12-10-2018 CLSA_c10890 2f60c0cb72265cee2e4c6e81f14b7053 314 PIRSF PIRSF000401 3 313 1.2E-117 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLSA_c10890 2f60c0cb72265cee2e4c6e81f14b7053 314 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 305 1.9E-79 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLSA_c10890 2f60c0cb72265cee2e4c6e81f14b7053 314 SUPERFAMILY SSF53335 65 310 4.18E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c10890 2f60c0cb72265cee2e4c6e81f14b7053 314 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 312 36.895 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLSA_c10890 2f60c0cb72265cee2e4c6e81f14b7053 314 Gene3D G3DSA:3.40.50.150 119 312 1.0E-65 T 12-10-2018 CLSA_c20660 149b2cf37698af4ee570457f7312860d 261 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 252 4.8E-108 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CLSA_c20660 149b2cf37698af4ee570457f7312860d 261 Pfam PF03609 PTS system sorbose-specific iic component 4 234 2.3E-77 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CLSA_c14540 97f1e71175aaf907d38bd7b5d613cf35 196 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 70 8.8E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLSA_c14540 97f1e71175aaf907d38bd7b5d613cf35 196 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLSA_c14540 97f1e71175aaf907d38bd7b5d613cf35 196 Gene3D G3DSA:1.20.120.1760 3 180 2.2E-12 T 12-10-2018 CLSA_c14540 97f1e71175aaf907d38bd7b5d613cf35 196 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 191 1.5E-53 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CLSA_c14540 97f1e71175aaf907d38bd7b5d613cf35 196 PIRSF PIRSF000847 1 196 2.6E-52 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CLSA_c10230 272d85f48c6339ed36c95ab8f82293b8 711 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 11 710 9.2E-233 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c10230 272d85f48c6339ed36c95ab8f82293b8 711 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 711 24.903 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c10230 272d85f48c6339ed36c95ab8f82293b8 711 PIRSF PIRSF001265 1 711 1.8E-279 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c10230 272d85f48c6339ed36c95ab8f82293b8 711 Pfam PF03030 Inorganic H+ pyrophosphatase 13 706 1.2E-266 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 SUPERFAMILY SSF55031 186 377 1.05E-36 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 Gene3D G3DSA:3.30.70.360 204 291 5.6E-145 T 12-10-2018 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 462 2.3E-128 T 12-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 Gene3D G3DSA:3.40.630.10 16 465 5.6E-145 T 12-10-2018 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 Pfam PF01546 Peptidase family M20/M25/M40 85 462 2.1E-27 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 SUPERFAMILY SSF53187 4 467 7.43E-56 T 12-10-2018 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 155 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLSA_c23850 ac038248f549fedde0612ea1ef06e706 467 Gene3D G3DSA:3.30.70.360 186 381 5.6E-145 T 12-10-2018 CLSA_c04650 862f284ffb0d42604a896436d3cb6da6 315 Pfam PF01522 Polysaccharide deacetylase 105 222 3.6E-24 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c04650 862f284ffb0d42604a896436d3cb6da6 315 SUPERFAMILY SSF88713 107 312 3.21E-45 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c04650 862f284ffb0d42604a896436d3cb6da6 315 Gene3D G3DSA:3.20.20.370 68 314 2.2E-58 T 12-10-2018 CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 Gene3D G3DSA:3.20.20.80 56 383 6.6E-89 T 12-10-2018 CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 SUPERFAMILY SSF51445 25 391 4.23E-84 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 SUPERFAMILY SSF51011 391 465 1.25E-8 T 12-10-2018 CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 Gene3D G3DSA:3.90.400.10 126 181 6.6E-89 T 12-10-2018 CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 Pfam PF16657 Maltogenic Amylase, C-terminal domain 391 463 1.0E-6 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 Pfam PF00128 Alpha amylase, catalytic domain 61 345 2.8E-52 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 Gene3D G3DSA:2.60.40.1180 386 466 1.8E-8 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta CLSA_c38560 cacf79b5f52f6b4212ec534df9f98634 468 SMART SM00642 30 382 1.7E-60 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 1.5E-66 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 4.4E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 SUPERFAMILY SSF56784 1 267 9.44E-76 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 Gene3D G3DSA:3.30.1240.10 86 191 8.7E-84 T 12-10-2018 CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 Gene3D G3DSA:3.40.50.1000 3 263 8.7E-84 T 12-10-2018 IPR023214 HAD superfamily CLSA_c31910 2603408a3def8dd68a4ae00442fa7670 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 3.0E-70 T 12-10-2018 CLSA_c45500 aad6648034f26489777f4de6f61be065 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.918 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CLSA_c45500 aad6648034f26489777f4de6f61be065 69 SMART SM01234 1 68 5.9E-43 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CLSA_c45500 aad6648034f26489777f4de6f61be065 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 68 1.9E-27 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CLSA_c45500 aad6648034f26489777f4de6f61be065 69 Pfam PF01809 Haemolytic domain 2 68 2.5E-31 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CLSA_c45500 aad6648034f26489777f4de6f61be065 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 2.0E-18 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CLSA_c28240 187c66651c485a69ca0041212093749c 159 Gene3D G3DSA:1.20.58.1290 63 157 1.7E-22 T 12-10-2018 CLSA_c28240 187c66651c485a69ca0041212093749c 159 SUPERFAMILY SSF141259 2 66 1.01E-12 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily CLSA_c28240 187c66651c485a69ca0041212093749c 159 Pfam PF02559 CarD-like/TRCF domain 2 110 1.7E-17 T 12-10-2018 IPR003711 CarD-like/TRCF domain CLSA_c28240 187c66651c485a69ca0041212093749c 159 Gene3D G3DSA:2.30.30.840 1 62 5.5E-23 T 12-10-2018 CLSA_c28240 187c66651c485a69ca0041212093749c 159 SMART SM01058 1 112 1.1E-20 T 12-10-2018 IPR003711 CarD-like/TRCF domain CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 Gene3D G3DSA:1.10.940.10 1 141 2.7E-36 T 12-10-2018 IPR035926 NusB-like superfamily CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 160 237 2.8E-6 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 SUPERFAMILY SSF48013 3 125 1.19E-31 T 12-10-2018 IPR035926 NusB-like superfamily CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 436 7.3E-59 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 223 237 3.2E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 3.2E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 420 437 3.2E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 3.2E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 3.2E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 Gene3D G3DSA:3.40.50.150 142 437 2.5E-84 T 12-10-2018 CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 Pfam PF01029 NusB family 2 123 2.8E-30 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 SUPERFAMILY SSF53335 138 438 3.22E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c13690 800eca87bf9b0fbcbe2b38477138781b 438 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 438 4.4E-120 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 CLSA_c42230 835639467a3a3f0e979fd661024822c4 269 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 6 124 6.3E-44 T 12-10-2018 IPR010056 Phage replisome organiser, N-terminal domain CLSA_c42230 835639467a3a3f0e979fd661024822c4 269 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 6 120 3.5E-24 T 12-10-2018 IPR010056 Phage replisome organiser, N-terminal domain CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 Pfam PF13545 Crp-like helix-turn-helix domain 154 220 7.5E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 119 6.4E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 SUPERFAMILY SSF46785 152 221 4.35E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 SUPERFAMILY SSF51206 26 139 3.27E-28 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 Gene3D G3DSA:1.10.10.10 150 222 2.6E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 SMART SM00100 15 133 2.2E-6 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 Gene3D G3DSA:2.60.120.10 13 145 6.7E-23 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c33790 fad28dd548b316451d98af5b259038c7 229 SMART SM00419 165 213 0.0033 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 SUPERFAMILY SSF48403 19 206 1.03E-29 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 Gene3D G3DSA:1.25.40.20 123 210 6.5E-13 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 Gene3D G3DSA:1.25.40.20 9 122 1.8E-20 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 SMART SM00248 114 143 53.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 SMART SM00248 79 110 0.16 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 SMART SM00248 147 181 2700.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 SMART SM00248 42 74 0.002 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 CLSA_c21490 c2fe2bc6507cdaefb7a114eeb705362a 212 Pfam PF12796 Ankyrin repeats (3 copies) 21 111 5.7E-9 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 SUPERFAMILY SSF56821 4 545 2.9E-209 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 Gene3D G3DSA:3.40.50.2030 226 376 2.1E-69 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 Gene3D G3DSA:1.20.1270.20 2 140 1.9E-45 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 547 23.539 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 Gene3D G3DSA:1.20.1270.20 141 224 5.7E-32 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 Gene3D G3DSA:3.40.50.2030 377 546 1.9E-63 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 5 545 6.7E-234 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 PIRSF PIRSF000076 5 547 8.6E-265 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c10420 91c7cc678b1acba0001f753e5bb36bd6 547 Pfam PF03063 Prismane/CO dehydrogenase family 5 543 4.0E-185 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c16560 3cae47c74a04c372764ce23f08b87b19 555 Gene3D G3DSA:3.40.50.1820 353 510 4.5E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c16560 3cae47c74a04c372764ce23f08b87b19 555 Pfam PF07519 Tannase and feruloyl esterase 98 553 1.2E-107 T 12-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 CLSA_c16560 3cae47c74a04c372764ce23f08b87b19 555 Gene3D G3DSA:3.40.50.1820 110 332 8.2E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c16560 3cae47c74a04c372764ce23f08b87b19 555 SUPERFAMILY SSF53474 128 487 5.25E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c06160 faaa312a4109528ce8017ba1f6718e0f 226 Gene3D G3DSA:2.40.50.580 1 76 1.1E-22 T 12-10-2018 CLSA_c06160 faaa312a4109528ce8017ba1f6718e0f 226 Pfam PF03749 Sugar fermentation stimulation protein 12 217 2.5E-78 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein CLSA_c06160 faaa312a4109528ce8017ba1f6718e0f 226 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 224 2.0E-54 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein CLSA_c06160 faaa312a4109528ce8017ba1f6718e0f 226 Gene3D G3DSA:3.40.1350.60 78 226 1.0E-46 T 12-10-2018 CLSA_c06160 faaa312a4109528ce8017ba1f6718e0f 226 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 226 46.909 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein CLSA_c35960 4b8b24d331ec0c2e42f628735d097175 390 Pfam PF01808 AICARFT/IMPCHase bienzyme 3 259 1.1E-62 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c35960 4b8b24d331ec0c2e42f628735d097175 390 Gene3D G3DSA:1.10.287.440 275 316 1.1E-96 T 12-10-2018 IPR024050 AICAR transformylase, insert domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c35960 4b8b24d331ec0c2e42f628735d097175 390 Gene3D G3DSA:3.40.140.20 175 390 1.1E-96 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c35960 4b8b24d331ec0c2e42f628735d097175 390 SMART SM00798 1 260 9.8E-46 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c35960 4b8b24d331ec0c2e42f628735d097175 390 SUPERFAMILY SSF53927 2 390 6.72E-130 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CLSA_c35960 4b8b24d331ec0c2e42f628735d097175 390 Gene3D G3DSA:3.40.140.20 27 171 9.9E-62 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c32760 b204fc1ee84001d6226977fa247ddceb 250 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 28 243 27.411 T 12-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CLSA_c32760 b204fc1ee84001d6226977fa247ddceb 250 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 28 228 5.9E-82 T 12-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CLSA_c32760 b204fc1ee84001d6226977fa247ddceb 250 Gene3D G3DSA:1.10.1760.20 28 236 8.5E-56 T 12-10-2018 CLSA_c32760 b204fc1ee84001d6226977fa247ddceb 250 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 29 233 5.8E-51 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 CLSA_c15550 5b83cd71975b4aebd64a1d768ba7425c 209 Pfam PF02734 DAK2 domain 31 204 1.1E-56 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c15550 5b83cd71975b4aebd64a1d768ba7425c 209 SUPERFAMILY SSF101473 1 207 6.02E-56 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c15550 5b83cd71975b4aebd64a1d768ba7425c 209 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 204 8.8E-75 T 12-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 CLSA_c15550 5b83cd71975b4aebd64a1d768ba7425c 209 Gene3D G3DSA:1.25.40.340 1 208 2.1E-64 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c15550 5b83cd71975b4aebd64a1d768ba7425c 209 SMART SM01120 31 205 5.1E-77 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLSA_c42660 bc45f9d6e8f76c8c66d8b861c5d8e507 482 Pfam PF05057 Putative serine esterase (DUF676) 263 334 1.8E-5 T 12-10-2018 IPR007751 Domain of unknown function DUF676, lipase-like CLSA_c42660 bc45f9d6e8f76c8c66d8b861c5d8e507 482 Gene3D G3DSA:3.40.50.1820 218 482 4.6E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c42660 bc45f9d6e8f76c8c66d8b861c5d8e507 482 SUPERFAMILY SSF53474 222 477 1.96E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 321 8.0E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 SUPERFAMILY SSF51735 100 295 4.2E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 Gene3D G3DSA:3.40.50.720 100 294 1.8E-114 T 12-10-2018 CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 294 8.4E-57 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 SUPERFAMILY SSF52283 2 133 2.76E-30 T 12-10-2018 CLSA_c33810 4ea568bd513767a43fe5c1465e5f3689 326 Gene3D G3DSA:3.40.50.720 2 312 1.8E-114 T 12-10-2018 CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 Gene3D G3DSA:3.40.50.720 98 477 3.6E-91 T 12-10-2018 CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 Gene3D G3DSA:1.10.1200.10 8 85 4.1E-14 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 SUPERFAMILY SSF51735 122 454 1.13E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 122 473 4.0E-94 T 12-10-2018 IPR010080 Thioester reductase-like domain CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 Pfam PF07993 Male sterility protein 124 359 6.1E-60 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 SUPERFAMILY SSF47336 13 82 3.4E-12 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 Pfam PF00550 Phosphopantetheine attachment site 16 82 2.9E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c16960 463f38c7151f5d9d521333e80f7bbcb6 486 ProSitePatterns PS00012 Phosphopantetheine attachment site. 39 54 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site CLSA_c31140 ea48627c76b67136bdbcf56bce3e4445 135 Gene3D G3DSA:1.10.10.10 1 81 6.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c31140 ea48627c76b67136bdbcf56bce3e4445 135 Gene3D G3DSA:3.30.1490.190 83 135 1.3E-14 T 12-10-2018 CLSA_c31140 ea48627c76b67136bdbcf56bce3e4445 135 Pfam PF01475 Ferric uptake regulator family 11 128 3.1E-30 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLSA_c31140 ea48627c76b67136bdbcf56bce3e4445 135 SUPERFAMILY SSF46785 3 133 3.96E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c29570 b413bd6f4e1b3db57f59457dbc2bd253 1000 Gene3D G3DSA:3.40.50.300 812 999 2.2E-27 T 12-10-2018 CLSA_c29570 b413bd6f4e1b3db57f59457dbc2bd253 1000 Pfam PF13087 AAA domain 807 979 3.5E-16 T 12-10-2018 CLSA_c29570 b413bd6f4e1b3db57f59457dbc2bd253 1000 SUPERFAMILY SSF52540 255 982 1.72E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 Gene3D G3DSA:3.40.1380.20 335 468 1.0E-184 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 SUPERFAMILY SSF50800 70 166 1.74E-26 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 3.8E-134 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 268 292 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 216 242 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 185 199 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 243 267 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 293 311 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 PRINTS PR01050 Pyruvate kinase family signature 312 328 2.7E-72 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 SUPERFAMILY SSF52935 322 471 1.31E-38 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 469 1.6E-32 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 Gene3D G3DSA:3.20.20.60 3 334 1.0E-184 T 12-10-2018 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 SUPERFAMILY SSF51621 1 342 9.77E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 471 2.3E-174 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c06060 659b100ad0ee8664c1058c3e07e95560 472 Gene3D G3DSA:2.40.33.10 70 167 1.0E-184 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLSA_c44920 f9e36320a3ea7e29016a70db7be9b527 316 Gene3D G3DSA:3.40.50.150 153 316 8.6E-20 T 12-10-2018 CLSA_c44920 f9e36320a3ea7e29016a70db7be9b527 316 Pfam PF01170 Putative RNA methylase family UPF0020 157 260 1.1E-8 T 12-10-2018 IPR000241 Putative RNA methylase domain CLSA_c44920 f9e36320a3ea7e29016a70db7be9b527 316 SUPERFAMILY SSF53335 129 301 1.46E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 Gene3D G3DSA:1.20.1250.20 258 472 2.6E-30 T 12-10-2018 CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 Gene3D G3DSA:1.20.1720.10 14 238 6.0E-42 T 12-10-2018 CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 SUPERFAMILY SSF103473 11 469 9.68E-67 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 Pfam PF07690 Major Facilitator Superfamily 20 412 1.1E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 3.1E-10 T 12-10-2018 CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 340 360 3.1E-10 T 12-10-2018 CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 3.1E-10 T 12-10-2018 CLSA_c34040 fff2336f4f38badcb49ddbf2023a94c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 3.1E-10 T 12-10-2018 CLSA_c45240 d1a34495f8190090a098b3af8306f9d7 60 SUPERFAMILY SSF140683 1 59 1.44E-17 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily CLSA_c45240 d1a34495f8190090a098b3af8306f9d7 60 Pfam PF08984 Domain of unknown function (DUF1858) 3 55 6.2E-22 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 CLSA_c45240 d1a34495f8190090a098b3af8306f9d7 60 Gene3D G3DSA:1.10.3910.10 1 60 5.7E-26 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily CLSA_c45240 d1a34495f8190090a098b3af8306f9d7 60 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 2 59 1.9E-28 T 12-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 Gene3D G3DSA:3.40.640.10 68 316 1.5E-157 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 PIRSF PIRSF000521 26 167 76.0 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 PIRSF PIRSF000521 173 425 2.9E-18 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 Pfam PF00202 Aminotransferase class-III 34 401 8.8E-73 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 8.3E-172 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 Gene3D G3DSA:3.90.1150.10 5 418 1.5E-157 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 2 426 94.257 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 SUPERFAMILY SSF53383 2 422 1.57E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c31650 74292f2046c995edeb2107ae0038915b 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 233 269 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c19120 28055ccb9e0a22e2cb049bda8dd5ce3a 165 Pfam PF01473 Putative cell wall binding repeat 48 66 3.6E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c19120 28055ccb9e0a22e2cb049bda8dd5ce3a 165 Gene3D G3DSA:2.10.270.10 27 85 1.3E-9 T 12-10-2018 CLSA_c19120 28055ccb9e0a22e2cb049bda8dd5ce3a 165 SUPERFAMILY SSF69360 37 86 3.4E-10 T 12-10-2018 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 SUPERFAMILY SSF54631 248 370 2.12E-26 T 12-10-2018 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 Gene3D G3DSA:3.10.580.10 248 369 5.6E-26 T 12-10-2018 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 Pfam PF00571 CBS domain 250 304 9.9E-8 T 12-10-2018 IPR000644 CBS domain CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 Pfam PF00571 CBS domain 310 364 1.3E-10 T 12-10-2018 IPR000644 CBS domain CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 SUPERFAMILY SSF52540 1 241 9.69E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 14 366 4.6E-123 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 SMART SM00382 26 213 3.6E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 Gene3D G3DSA:3.40.50.300 1 240 4.4E-80 T 12-10-2018 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 Pfam PF00005 ABC transporter 17 163 1.9E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 SMART SM00116 317 365 3.0E-6 T 12-10-2018 IPR000644 CBS domain CLSA_c14680 12d9994339b23b685538cbe2c6e4af5c 375 SMART SM00116 257 305 1.7E-4 T 12-10-2018 IPR000644 CBS domain CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 Gene3D G3DSA:1.25.40.10 34 243 9.5E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 SUPERFAMILY SSF81901 307 531 2.88E-21 T 12-10-2018 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 Gene3D G3DSA:1.25.40.10 244 564 1.1E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 Pfam PF13181 Tetratricopeptide repeat 437 467 7.4E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 Pfam PF13181 Tetratricopeptide repeat 476 504 0.025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 SUPERFAMILY SSF48452 45 188 4.93E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 SMART SM00028 437 470 0.043 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 SMART SM00028 333 366 210.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12400 aad443eb10faf9e6bc2be410246fe907 579 SMART SM00028 471 504 0.52 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c19520 cdd7007ea9a9165f0fe762421cdfe7ea 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLSA_c19520 cdd7007ea9a9165f0fe762421cdfe7ea 316 Gene3D G3DSA:3.40.1190.20 1 312 2.2E-100 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c19520 cdd7007ea9a9165f0fe762421cdfe7ea 316 Pfam PF00294 pfkB family carbohydrate kinase 2 297 1.2E-61 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB CLSA_c19520 cdd7007ea9a9165f0fe762421cdfe7ea 316 SUPERFAMILY SSF53613 1 308 1.51E-88 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c30990 133dcd25cdc1c839bd42f4b018c3e84f 125 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 3.7E-30 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CLSA_c30990 133dcd25cdc1c839bd42f4b018c3e84f 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 2.2E-22 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CLSA_c30990 133dcd25cdc1c839bd42f4b018c3e84f 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 18.364 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CLSA_c22730 804e42027d06b7d4b0c052789e4ee7dd 356 Gene3D G3DSA:3.40.50.720 17 167 2.0E-38 T 12-10-2018 CLSA_c22730 804e42027d06b7d4b0c052789e4ee7dd 356 Pfam PF10728 Domain of unknown function (DUF2520) 184 292 4.5E-28 T 12-10-2018 IPR018931 Domain of unknown function DUF2520 CLSA_c22730 804e42027d06b7d4b0c052789e4ee7dd 356 Gene3D G3DSA:1.10.1040.20 201 300 1.6E-21 T 12-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily CLSA_c22730 804e42027d06b7d4b0c052789e4ee7dd 356 SUPERFAMILY SSF51735 20 159 3.95E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c22730 804e42027d06b7d4b0c052789e4ee7dd 356 SUPERFAMILY SSF48179 203 299 3.33E-22 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c22730 804e42027d06b7d4b0c052789e4ee7dd 356 Pfam PF10727 Rossmann-like domain 19 133 4.4E-9 T 12-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 Pfam PF03471 Transporter associated domain 353 429 1.0E-21 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 SMART SM01091 352 430 4.9E-26 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 Pfam PF01595 Domain of unknown function DUF21 8 202 9.1E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 Pfam PF00571 CBS domain 287 336 1.6E-4 T 12-10-2018 IPR000644 CBS domain CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 Pfam PF00571 CBS domain 219 271 0.0015 T 12-10-2018 IPR000644 CBS domain CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 SUPERFAMILY SSF54631 205 339 5.61E-30 T 12-10-2018 CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 Gene3D G3DSA:3.10.580.10 197 345 1.8E-54 T 12-10-2018 CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 Gene3D G3DSA:3.30.465.10 346 437 3.2E-22 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CLSA_c33190 19e25f7a5f87b65b95ff487937dae44d 438 SUPERFAMILY SSF56176 350 436 1.53E-22 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 Gene3D G3DSA:1.10.10.10 132 232 3.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 229 1.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 SUPERFAMILY SSF52172 2 183 3.56E-42 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 Pfam PF00072 Response regulator receiver domain 6 115 2.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 Gene3D G3DSA:3.40.50.2300 1 131 6.9E-40 T 12-10-2018 CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 SMART SM00448 4 114 1.4E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c31600 372972e4d48e729e7be54356eba0c878 232 SMART SM00862 153 229 2.0E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c22400 71d8ebd49e4cbd0e2d29492be9aa5e7e 137 Gene3D G3DSA:2.160.20.10 4 130 3.6E-10 T 12-10-2018 IPR012334 Pectin lyase fold CLSA_c22400 71d8ebd49e4cbd0e2d29492be9aa5e7e 137 SUPERFAMILY SSF51126 7 127 2.98E-12 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c37250 23cad74e6f43de13adc32e8488c96302 578 SUPERFAMILY SSF69360 469 577 8.11E-26 T 12-10-2018 CLSA_c37250 23cad74e6f43de13adc32e8488c96302 578 Gene3D G3DSA:2.10.270.10 442 535 3.4E-15 T 12-10-2018 CLSA_c37250 23cad74e6f43de13adc32e8488c96302 578 Pfam PF01473 Putative cell wall binding repeat 516 530 7.4E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c37250 23cad74e6f43de13adc32e8488c96302 578 Pfam PF01473 Putative cell wall binding repeat 541 559 1.7E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c37250 23cad74e6f43de13adc32e8488c96302 578 Pfam PF01473 Putative cell wall binding repeat 497 514 1.6E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c37250 23cad74e6f43de13adc32e8488c96302 578 Gene3D G3DSA:2.10.270.10 536 578 7.8E-9 T 12-10-2018 CLSA_c35980 9c10115439880dbb297dfb7c28b9ce32 129 ProDom PD082409 MEMBRANE YVAD TRANSMEMBRANE 1 109 2.0E-35 T 12-10-2018 IPR020348 Uncharacterised protein family YvaD CLSA_c35980 9c10115439880dbb297dfb7c28b9ce32 129 Pfam PF17314 Family of unknown function (DUF5360) 4 126 5.8E-55 T 12-10-2018 IPR020348 Uncharacterised protein family YvaD CLSA_c26580 9cb75f514a0fed914471b5d5101e514b 433 Pfam PF07690 Major Facilitator Superfamily 19 385 3.0E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c26580 9cb75f514a0fed914471b5d5101e514b 433 SUPERFAMILY SSF103473 14 429 4.58E-53 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c26580 9cb75f514a0fed914471b5d5101e514b 433 Gene3D G3DSA:1.20.1250.20 240 430 5.3E-43 T 12-10-2018 CLSA_c26580 9cb75f514a0fed914471b5d5101e514b 433 Gene3D G3DSA:1.20.1250.20 5 199 4.0E-37 T 12-10-2018 CLSA_c16220 96b90d41444197c8ac377a1b36d973c8 157 Gene3D G3DSA:2.10.270.10 27 100 3.4E-10 T 12-10-2018 CLSA_c16220 96b90d41444197c8ac377a1b36d973c8 157 SUPERFAMILY SSF69360 21 86 6.8E-15 T 12-10-2018 CLSA_c16220 96b90d41444197c8ac377a1b36d973c8 157 Pfam PF01473 Putative cell wall binding repeat 46 64 1.8E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 280 1.9E-58 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 Gene3D G3DSA:3.30.1240.10 82 209 2.5E-74 T 12-10-2018 CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 SUPERFAMILY SSF56784 1 284 2.07E-63 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 280 1.5E-57 T 12-10-2018 CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 Gene3D G3DSA:3.40.50.1000 3 277 2.5E-74 T 12-10-2018 IPR023214 HAD superfamily CLSA_c07550 6e9c4e569768c05db4b9faaca286387d 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 253 4.2E-24 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c18730 9f45d497f6598c68077442585e92a68e 319 Pfam PF03812 2-keto-3-deoxygluconate permease 3 306 5.9E-97 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c18730 9f45d497f6598c68077442585e92a68e 319 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 317 8.0E-27 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c16790 c7686009e7633373ad5e84462b2e9cc9 423 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 13 398 22.365 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CLSA_c16790 c7686009e7633373ad5e84462b2e9cc9 423 Gene3D G3DSA:1.20.1530.10 11 397 8.1E-142 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily CLSA_c16790 c7686009e7633373ad5e84462b2e9cc9 423 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 16 386 2.1E-131 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CLSA_c16790 c7686009e7633373ad5e84462b2e9cc9 423 Pfam PF06965 Na+/H+ antiporter 1 15 388 9.7E-145 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 Gene3D G3DSA:1.20.1720.10 15 257 6.2E-45 T 12-10-2018 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 Gene3D G3DSA:1.20.1250.20 260 478 7.7E-27 T 12-10-2018 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 426 6.9E-81 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 Pfam PF07690 Major Facilitator Superfamily 21 410 1.8E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 SUPERFAMILY SSF103473 5 476 7.85E-75 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 6.1E-15 T 12-10-2018 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 6.1E-15 T 12-10-2018 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 6.1E-15 T 12-10-2018 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 164 188 6.1E-15 T 12-10-2018 CLSA_c24650 915945ec02ba66f5ba3588924e85918d 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 6.1E-15 T 12-10-2018 CLSA_c28710 20d1ad3ec873a0ee29afbf6f83cb0820 297 Gene3D G3DSA:3.90.1640.30 21 286 4.4E-53 T 12-10-2018 CLSA_c28710 20d1ad3ec873a0ee29afbf6f83cb0820 297 SUPERFAMILY SSF64182 22 288 1.48E-52 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily CLSA_c06410 d765d1e651fd48ad009d680d370798f1 128 SUPERFAMILY SSF118010 1 110 3.14E-18 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily CLSA_c06410 d765d1e651fd48ad009d680d370798f1 128 Pfam PF04327 Cysteine protease Prp 1 107 3.1E-15 T 12-10-2018 IPR007422 Cysteine protease Prp CLSA_c06410 d765d1e651fd48ad009d680d370798f1 128 Gene3D G3DSA:3.30.70.1490 1 115 1.9E-12 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily CLSA_c32470 bb336b59bd7c89f103a5b1071a27e7a9 218 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 196 2.8E-25 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c32470 bb336b59bd7c89f103a5b1071a27e7a9 218 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 210 5.7E-48 T 12-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CLSA_c32470 bb336b59bd7c89f103a5b1071a27e7a9 218 SUPERFAMILY SSF53790 1 214 1.74E-35 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c32470 bb336b59bd7c89f103a5b1071a27e7a9 218 Gene3D G3DSA:3.40.1010.10 1 115 1.0E-18 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c15630 d57ce01650687b1694a80e797e0e1d62 167 Pfam PF14489 QueF-like protein 64 140 3.8E-35 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CLSA_c15630 d57ce01650687b1694a80e797e0e1d62 167 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 29 140 2.3E-53 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CLSA_c15630 d57ce01650687b1694a80e797e0e1d62 167 SUPERFAMILY SSF55620 29 136 1.11E-28 T 12-10-2018 CLSA_c15630 d57ce01650687b1694a80e797e0e1d62 167 Gene3D G3DSA:3.30.1130.10 23 167 1.4E-66 T 12-10-2018 CLSA_c15630 d57ce01650687b1694a80e797e0e1d62 167 PIRSF PIRSF027377 11 149 3.5E-61 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CLSA_c15630 d57ce01650687b1694a80e797e0e1d62 167 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 167 72.09 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CLSA_c40910 1a624556e6aa57f6da64692d48f96cea 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 6.4E-70 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CLSA_c40910 1a624556e6aa57f6da64692d48f96cea 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CLSA_c40910 1a624556e6aa57f6da64692d48f96cea 258 Gene3D G3DSA:3.90.226.10 1 199 9.5E-74 T 12-10-2018 CLSA_c40910 1a624556e6aa57f6da64692d48f96cea 258 SUPERFAMILY SSF52096 1 257 9.0E-88 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c40910 1a624556e6aa57f6da64692d48f96cea 258 Gene3D G3DSA:1.10.12.10 200 258 3.7E-21 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CLSA_c12980 707ab6352e20379e86246817591fa85a 235 Gene3D G3DSA:3.30.200.20 7 232 6.1E-99 T 12-10-2018 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 34.743 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 Gene3D G3DSA:3.30.470.20 85 221 6.1E-99 T 12-10-2018 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 Pfam PF01259 SAICAR synthetase 7 232 9.3E-71 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 SUPERFAMILY SSF56104 2 233 4.9E-86 T 12-10-2018 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLSA_c12980 707ab6352e20379e86246817591fa85a 235 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 233 7.2E-75 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CLSA_c35490 1ed83e176c2821d8ec99c0410dd67491 138 Pfam PF09393 Phage tail tube protein 4 133 2.8E-44 T 12-10-2018 IPR018989 Phage tail tube protein CLSA_c35490 1ed83e176c2821d8ec99c0410dd67491 138 Gene3D G3DSA:2.30.110.40 3 133 6.9E-35 T 12-10-2018 IPR038628 XkdM-like superfamily CLSA_c35490 1ed83e176c2821d8ec99c0410dd67491 138 SUPERFAMILY SSF69279 7 135 2.04E-38 T 12-10-2018 CLSA_c27160 339715197b93b301b32f510e3d72fd77 278 Gene3D G3DSA:3.40.50.10490 94 275 6.9E-33 T 12-10-2018 CLSA_c27160 339715197b93b301b32f510e3d72fd77 278 SUPERFAMILY SSF46689 3 78 6.81E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c27160 339715197b93b301b32f510e3d72fd77 278 Gene3D G3DSA:1.10.10.10 1 78 3.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c27160 339715197b93b301b32f510e3d72fd77 278 Pfam PF01380 SIS domain 126 250 1.0E-21 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c27160 339715197b93b301b32f510e3d72fd77 278 SUPERFAMILY SSF53697 102 275 7.79E-28 T 12-10-2018 CLSA_c27160 339715197b93b301b32f510e3d72fd77 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 71 3.7E-14 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c20460 f219b75276e4009d51b46e8dddab0bd4 161 Pfam PF13690 Chemotaxis phosphatase CheX 43 132 4.9E-18 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CLSA_c20460 f219b75276e4009d51b46e8dddab0bd4 161 SUPERFAMILY SSF103039 1 154 6.67E-27 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c20460 f219b75276e4009d51b46e8dddab0bd4 161 Gene3D G3DSA:3.40.1550.10 1 155 3.9E-28 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 PIRSF PIRSF000858 1 522 6.0E-228 T 12-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 SUPERFAMILY SSF100950 275 516 5.8E-79 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 SMART SM00882 6 243 1.9E-67 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 Pfam PF01144 Coenzyme A transferase 10 242 2.7E-28 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 Gene3D G3DSA:3.40.1080.10 274 521 6.4E-112 T 12-10-2018 CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 Gene3D G3DSA:3.40.1080.10 1 267 6.4E-103 T 12-10-2018 CLSA_c40900 df4d1c260f9047c8750d1b784c3f0ba6 522 SUPERFAMILY SSF100950 6 258 3.08E-85 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 Gene3D G3DSA:1.10.340.30 20 131 2.2E-78 T 12-10-2018 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 TIGRFAM TIGR01083 nth: endonuclease III 3 193 5.1E-80 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 Gene3D G3DSA:1.10.1670.10 14 202 2.2E-78 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 167 1.7E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 PIRSF PIRSF001435 1 208 2.4E-59 T 12-10-2018 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 SMART SM00478 37 184 1.0E-48 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 186 202 2.6E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 SUPERFAMILY SSF48150 6 205 1.49E-68 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 Hamap MF_00942 Endonuclease III [nth]. 1 208 38.171 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLSA_c40520 d3688aca263eaed13e616bb5f8760757 209 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 186 202 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLSA_c33330 6bf976998772a82f3b5df316224bbac7 178 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 42 155 3.0E-9 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c33330 6bf976998772a82f3b5df316224bbac7 178 SUPERFAMILY SSF53254 43 171 1.41E-15 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c33330 6bf976998772a82f3b5df316224bbac7 178 Gene3D G3DSA:3.40.50.1240 39 167 1.5E-13 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c07440 d14b708e3326cc71f1e8f9e1751f990f 259 Gene3D G3DSA:3.40.190.10 43 252 1.0E-69 T 12-10-2018 CLSA_c07440 d14b708e3326cc71f1e8f9e1751f990f 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 5.1E-58 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c07440 d14b708e3326cc71f1e8f9e1751f990f 259 Gene3D G3DSA:3.40.190.10 121 218 1.0E-69 T 12-10-2018 CLSA_c07440 d14b708e3326cc71f1e8f9e1751f990f 259 SUPERFAMILY SSF53850 1 257 4.53E-65 T 12-10-2018 CLSA_c07440 d14b708e3326cc71f1e8f9e1751f990f 259 SMART SM00079 37 259 1.5E-7 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CLSA_c07440 d14b708e3326cc71f1e8f9e1751f990f 259 SMART SM00062 37 259 1.2E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c35460 c916b23a2612ba1aaa7572ab1929d76b 1237 Pfam PF10145 Phage-related minor tail protein 152 349 8.9E-46 T 12-10-2018 IPR010090 Phage tail tape measure protein CLSA_c35460 c916b23a2612ba1aaa7572ab1929d76b 1237 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 115 460 6.7E-71 T 12-10-2018 IPR010090 Phage tail tape measure protein CLSA_c13710 543d3799960cce755fb75a0cc1739566 239 SMART SM00332 3 235 2.9E-24 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c13710 543d3799960cce755fb75a0cc1739566 239 Gene3D G3DSA:3.60.40.10 1 236 7.2E-66 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c13710 543d3799960cce755fb75a0cc1739566 239 Pfam PF13672 Protein phosphatase 2C 12 199 1.6E-18 T 12-10-2018 CLSA_c13710 543d3799960cce755fb75a0cc1739566 239 SMART SM00331 6 237 1.2E-26 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c13710 543d3799960cce755fb75a0cc1739566 239 SUPERFAMILY SSF81606 2 234 3.27E-61 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c16980 77e1a83d2a93d1973cc732d441337dad 194 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 8 190 2.0E-63 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane CLSA_c16980 77e1a83d2a93d1973cc732d441337dad 194 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 5 190 2.7E-45 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane CLSA_c12670 07c3cbd2f298d08e2b60e77a42677c59 247 Pfam PF13482 RNase_H superfamily 32 209 3.6E-43 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain CLSA_c12670 07c3cbd2f298d08e2b60e77a42677c59 247 SUPERFAMILY SSF53098 18 209 7.59E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c36170 fc70d448b30849831ae762a237290377 190 Pfam PF01613 Flavin reductase like domain 14 148 1.6E-11 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c36170 fc70d448b30849831ae762a237290377 190 SUPERFAMILY SSF50475 10 168 7.25E-29 T 12-10-2018 CLSA_c36170 fc70d448b30849831ae762a237290377 190 Gene3D G3DSA:2.30.110.10 4 190 6.9E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c27860 f7f4280abcf84eccfc1ad5104c4af2bb 272 SUPERFAMILY SSF54001 108 249 1.85E-24 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c27860 f7f4280abcf84eccfc1ad5104c4af2bb 272 Pfam PF01841 Transglutaminase-like superfamily 134 245 1.1E-19 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c27860 f7f4280abcf84eccfc1ad5104c4af2bb 272 Gene3D G3DSA:3.10.620.30 106 264 1.1E-25 T 12-10-2018 CLSA_c27860 f7f4280abcf84eccfc1ad5104c4af2bb 272 SMART SM00460 186 248 6.1E-11 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 SUPERFAMILY SSF55874 74 235 1.22E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 Gene3D G3DSA:1.10.287.130 12 82 5.1E-10 T 12-10-2018 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 SUPERFAMILY SSF47384 4 83 6.08E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 PRINTS PR00344 Bacterial sensor protein C-terminal signature 183 193 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 215 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 PRINTS PR00344 Bacterial sensor protein C-terminal signature 221 234 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 PRINTS PR00344 Bacterial sensor protein C-terminal signature 165 179 1.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 Gene3D G3DSA:3.30.565.10 84 235 3.4E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 SMART SM00388 18 83 1.7E-4 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 SMART SM00387 128 235 2.8E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 Pfam PF00512 His Kinase A (phospho-acceptor) domain 22 83 1.2E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c20980 963a428b8264c0b0bdc828de2128025a 235 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 129 234 3.5E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c08760 a1028b6bef78010104d88b7752ad6b8a 186 Pfam PF13649 Methyltransferase domain 54 139 1.2E-13 T 12-10-2018 CLSA_c08760 a1028b6bef78010104d88b7752ad6b8a 186 Gene3D G3DSA:3.40.50.150 31 180 3.3E-22 T 12-10-2018 CLSA_c08760 a1028b6bef78010104d88b7752ad6b8a 186 SUPERFAMILY SSF53335 33 168 3.01E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 204 217 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 6 525 2.3E-222 T 12-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 SUPERFAMILY SSF51569 3 294 7.33E-80 T 12-10-2018 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 SUPERFAMILY SSF110921 410 515 4.18E-20 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 SMART SM00917 376 519 6.5E-36 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 Pfam PF08502 LeuA allosteric (dimerisation) domain 379 518 1.1E-27 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 Gene3D G3DSA:3.30.160.270 356 517 5.4E-8 T 12-10-2018 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 Gene3D G3DSA:3.20.20.70 5 327 6.2E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c02680 1454bf707857c204fda5b53305e0f93c 531 Pfam PF00682 HMGL-like 5 276 2.8E-51 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLSA_c19920 b5b0c15274d8d2285a6c97ad60258d94 327 Pfam PF05107 CRISPR-associated protein Cas7 11 272 1.8E-37 T 12-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C CLSA_c32730 986d49f2b3859f56998702399bcf0969 378 SUPERFAMILY SSF51726 18 378 7.19E-81 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CLSA_c32730 986d49f2b3859f56998702399bcf0969 378 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 20 352 2.3E-13 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLSA_c32730 986d49f2b3859f56998702399bcf0969 378 Gene3D G3DSA:3.20.20.210 10 378 5.8E-120 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CLSA_c08650 b0365d3357ae84baefccf6c0ec06234a 311 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 298 2.2E-16 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 CLSA_c08650 b0365d3357ae84baefccf6c0ec06234a 311 SUPERFAMILY SSF53187 10 308 1.82E-37 T 12-10-2018 CLSA_c08650 b0365d3357ae84baefccf6c0ec06234a 311 Gene3D G3DSA:3.40.630.10 2 309 2.4E-50 T 12-10-2018 CLSA_c14350 35855703a0b52d0db9e5294aa195f233 337 Gene3D G3DSA:2.30.42.10 122 199 4.2E-15 T 12-10-2018 CLSA_c14350 35855703a0b52d0db9e5294aa195f233 337 Pfam PF02163 Peptidase family M50 6 322 2.6E-73 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CLSA_c14350 35855703a0b52d0db9e5294aa195f233 337 SUPERFAMILY SSF50156 90 184 3.68E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 CLSA_c23050 15bb305b4a7542e54c4ddbd4d4a336c9 142 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 40 130 5.7E-7 T 12-10-2018 IPR014986 Clostridium phage phiCD119, XkdN CLSA_c23050 15bb305b4a7542e54c4ddbd4d4a336c9 142 Gene3D G3DSA:3.30.2220.30 13 119 3.7E-5 T 12-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily CLSA_c42950 5753501ad85e749228a73a38da14d7ba 450 Hamap MF_00973 Gluconeogenesis factor. 100 417 34.745 T 12-10-2018 IPR010119 Gluconeogenesis factor CLSA_c42950 5753501ad85e749228a73a38da14d7ba 450 SUPERFAMILY SSF142338 101 412 4.58E-100 T 12-10-2018 CLSA_c42950 5753501ad85e749228a73a38da14d7ba 450 Gene3D G3DSA:3.40.50.12300 99 427 7.6E-126 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily CLSA_c42950 5753501ad85e749228a73a38da14d7ba 450 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 104 414 2.4E-118 T 12-10-2018 IPR010119 Gluconeogenesis factor CLSA_c42950 5753501ad85e749228a73a38da14d7ba 450 Pfam PF01933 Uncharacterised protein family UPF0052 104 392 3.4E-109 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CLSA_c06570 c1ec4ed24d86c7cb908dd1f7a08c003c 455 Pfam PF05099 Tellurite resistance protein TerB 327 453 7.9E-19 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal CLSA_c06570 c1ec4ed24d86c7cb908dd1f7a08c003c 455 Gene3D G3DSA:2.60.60.30 19 187 3.1E-63 T 12-10-2018 CLSA_c06570 c1ec4ed24d86c7cb908dd1f7a08c003c 455 SUPERFAMILY SSF158682 320 453 1.83E-17 T 12-10-2018 IPR029024 TerB-like CLSA_c06570 c1ec4ed24d86c7cb908dd1f7a08c003c 455 Gene3D G3DSA:1.10.3680.10 310 454 3.8E-37 T 12-10-2018 IPR029024 TerB-like CLSA_c06570 c1ec4ed24d86c7cb908dd1f7a08c003c 455 Pfam PF02342 TerD domain 1 188 5.5E-77 T 12-10-2018 IPR003325 TerD domain CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 Pfam PF00270 DEAD/DEAH box helicase 34 200 1.5E-49 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 SMART SM00490 262 343 2.8E-32 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 SUPERFAMILY SSF52540 77 363 4.27E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 SMART SM00487 29 226 1.5E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 Gene3D G3DSA:3.40.50.300 219 377 7.9E-49 T 12-10-2018 CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 Gene3D G3DSA:3.40.50.300 2 215 6.6E-74 T 12-10-2018 CLSA_c23640 9bcee767624ced1ead3b941bbec89a01 378 Pfam PF00271 Helicase conserved C-terminal domain 235 343 7.7E-31 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c32150 65119aa663d1583fdd674ab9f4c88ed3 243 SUPERFAMILY SSF53790 1 237 2.09E-52 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c32150 65119aa663d1583fdd674ab9f4c88ed3 243 Gene3D G3DSA:3.40.1010.10 1 107 1.5E-28 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c32150 65119aa663d1583fdd674ab9f4c88ed3 243 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 237 6.9E-89 T 12-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CLSA_c32150 65119aa663d1583fdd674ab9f4c88ed3 243 Gene3D G3DSA:3.30.950.10 108 238 4.5E-48 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CLSA_c32150 65119aa663d1583fdd674ab9f4c88ed3 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 203 1.5E-36 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c44620 d991b493570a3a4ee715f7ff24213059 121 Gene3D G3DSA:1.10.530.40 72 121 8.8E-7 T 12-10-2018 CLSA_c44620 d991b493570a3a4ee715f7ff24213059 121 Pfam PF01471 Putative peptidoglycan binding domain 13 55 1.0E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like CLSA_c44620 d991b493570a3a4ee715f7ff24213059 121 SUPERFAMILY SSF53955 61 120 3.02E-6 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily CLSA_c44620 d991b493570a3a4ee715f7ff24213059 121 SUPERFAMILY SSF47090 13 56 6.44E-11 T 12-10-2018 IPR036365 PGBD-like superfamily CLSA_c44620 d991b493570a3a4ee715f7ff24213059 121 Gene3D G3DSA:1.10.101.10 7 65 4.5E-11 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CLSA_c18500 3c101931b77121f1613b9ad11ac1273d 312 SUPERFAMILY SSF53098 109 298 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c18500 3c101931b77121f1613b9ad11ac1273d 312 Pfam PF05598 Transposase domain (DUF772) 36 98 5.6E-6 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c18500 3c101931b77121f1613b9ad11ac1273d 312 Pfam PF01609 Transposase DDE domain 116 293 7.4E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c24820 3c101931b77121f1613b9ad11ac1273d 312 SUPERFAMILY SSF53098 109 298 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c24820 3c101931b77121f1613b9ad11ac1273d 312 Pfam PF05598 Transposase domain (DUF772) 36 98 5.6E-6 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c24820 3c101931b77121f1613b9ad11ac1273d 312 Pfam PF01609 Transposase DDE domain 116 293 7.4E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c35030 3c101931b77121f1613b9ad11ac1273d 312 SUPERFAMILY SSF53098 109 298 1.82E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c35030 3c101931b77121f1613b9ad11ac1273d 312 Pfam PF05598 Transposase domain (DUF772) 36 98 5.6E-6 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c35030 3c101931b77121f1613b9ad11ac1273d 312 Pfam PF01609 Transposase DDE domain 116 293 7.4E-16 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 SUPERFAMILY SSF53223 4 108 2.65E-30 T 12-10-2018 CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 11 283 4.6E-62 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 1.5E-25 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 SUPERFAMILY SSF51735 109 285 1.97E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 287 31.169 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 Gene3D G3DSA:3.40.50.720 110 259 9.4E-93 T 12-10-2018 CLSA_c07040 6dedbeb028e5920c19e2106a10e2984b 288 Gene3D G3DSA:3.40.50.10860 13 276 9.4E-93 T 12-10-2018 CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 Gene3D G3DSA:1.10.10.10 103 177 1.7E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 SUPERFAMILY SSF88659 117 177 4.11E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 174 5.7E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 Gene3D G3DSA:1.10.1740.10 6 88 3.3E-9 T 12-10-2018 CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 Pfam PF04542 Sigma-70 region 2 44 89 1.0E-6 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 Pfam PF08281 Sigma-70, region 4 121 172 2.2E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c19610 e29d8bc11343a52e252c4a240a264609 188 SUPERFAMILY SSF88946 4 101 1.6E-11 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 Gene3D G3DSA:1.10.260.40 1 57 2.7E-22 T 12-10-2018 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 Gene3D G3DSA:3.40.50.2300 82 336 1.2E-66 T 12-10-2018 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 Gene3D G3DSA:3.40.50.2300 174 342 1.2E-66 T 12-10-2018 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 Pfam PF13377 Periplasmic binding protein-like domain 184 344 3.2E-35 T 12-10-2018 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 SMART SM00354 4 70 2.8E-22 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 SUPERFAMILY SSF47413 2 57 5.34E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 SUPERFAMILY SSF53822 81 346 7.43E-66 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c09960 f3487143e7180af34eb5423397cfd85a 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 46 2.1E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 SUPERFAMILY SSF56821 16 624 1.5E-157 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 11 622 2.8E-256 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 Gene3D G3DSA:3.40.50.2030 407 621 2.0E-69 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 Gene3D G3DSA:3.40.50.2030 228 401 6.7E-48 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 Gene3D G3DSA:1.20.1270.30 56 227 2.7E-49 T 12-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 Pfam PF03063 Prismane/CO dehydrogenase family 42 604 1.3E-144 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLSA_c14830 3350682dacbfe7068d2dfad0f82eadf0 624 PIRSF PIRSF005023 1 624 1.4E-235 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 SUPERFAMILY SSF48674 457 517 1.44E-13 T 12-10-2018 IPR008953 Iron hydrogenase, small subunit HydB-type GO:0005506|GO:0008901|GO:0009055|GO:0042597|GO:0051536 MetaCyc: PWY-6759|MetaCyc: PWY-6780|MetaCyc: PWY-6785 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 395 406 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 SUPERFAMILY SSF54862 363 443 8.15E-19 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 15 383 2.0E-134 T 12-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Gene3D G3DSA:3.40.50.1780 79 382 1.6E-137 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 SUPERFAMILY SSF54862 12 83 4.29E-13 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Pfam PF14697 4Fe-4S dicluster domain 389 442 2.1E-10 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Gene3D G3DSA:3.40.950.10 144 373 1.6E-137 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Gene3D G3DSA:3.30.70.20 17 78 1.6E-137 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Gene3D G3DSA:3.30.70.20 383 456 3.0E-13 T 12-10-2018 CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Pfam PF02256 Iron hydrogenase small subunit 456 509 3.7E-14 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 SUPERFAMILY SSF53920 63 385 2.09E-101 T 12-10-2018 IPR009016 Iron hydrogenase CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Pfam PF12838 4Fe-4S dicluster domain 21 77 4.3E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Gene3D G3DSA:4.10.260.20 457 524 1.1E-12 T 12-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 96 379 1.4E-84 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 SMART SM00902 452 511 9.9E-11 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit CLSA_c21790 ab05779422ebcc7d355c1cbc93b93895 525 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c20650 3faeb177a9409ed4b1973c9ecbbd01a5 163 SUPERFAMILY SSF52728 1 161 8.37E-54 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c20650 3faeb177a9409ed4b1973c9ecbbd01a5 163 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.4E-52 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CLSA_c20650 3faeb177a9409ed4b1973c9ecbbd01a5 163 Gene3D G3DSA:3.40.35.10 1 163 7.2E-57 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 CLSA_c20650 3faeb177a9409ed4b1973c9ecbbd01a5 163 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 1.7E-51 T 12-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 SMART SM00861 5 170 1.7E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 Gene3D G3DSA:3.40.50.970 1 179 2.7E-70 T 12-10-2018 CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 SUPERFAMILY SSF52922 179 310 1.96E-39 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 Gene3D G3DSA:3.40.50.920 182 313 9.9E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 SUPERFAMILY SSF52518 2 171 9.1E-62 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 Pfam PF02780 Transketolase, C-terminal domain 182 302 1.6E-36 T 12-10-2018 IPR033248 Transketolase, C-terminal domain CLSA_c43110 337f07f25e16fb87f72c5916b6eaef47 314 Pfam PF02779 Transketolase, pyrimidine binding domain 4 168 2.1E-43 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CLSA_c04740 203715227fc5c3758c2ffaa897b10588 336 Gene3D G3DSA:3.40.50.1820 62 330 3.0E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c04740 203715227fc5c3758c2ffaa897b10588 336 SUPERFAMILY SSF53474 57 191 7.94E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c04740 203715227fc5c3758c2ffaa897b10588 336 Pfam PF00561 alpha/beta hydrolase fold 88 198 1.7E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c32020 45703787e2da26334eb9e63a3652d345 242 Pfam PF02654 Cobalamin-5-phosphate synthase 2 235 8.3E-46 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CLSA_c32020 45703787e2da26334eb9e63a3652d345 242 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 242 29.795 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 Gene3D G3DSA:3.40.50.150 178 501 2.1E-73 T 12-10-2018 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 Gene3D G3DSA:1.20.1260.30 1 177 5.8E-27 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 Pfam PF12161 HsdM N-terminal domain 6 139 6.5E-16 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 Pfam PF02384 N-6 DNA Methylase 154 481 6.5E-61 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 SUPERFAMILY SSF53335 5 518 4.25E-117 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 329 353 4.9E-14 T 12-10-2018 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 213 4.9E-14 T 12-10-2018 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 191 4.9E-14 T 12-10-2018 CLSA_c04430 d727fa8f0554d73770c3a42b81457425 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 4.9E-14 T 12-10-2018 CLSA_c30140 a304e1d96627f350466a2ae07d71eb74 185 Pfam PF13392 HNH endonuclease 56 100 1.9E-10 T 12-10-2018 IPR003615 HNH nuclease CLSA_c30140 a304e1d96627f350466a2ae07d71eb74 185 SUPERFAMILY SSF64496 125 173 1.1E-5 T 12-10-2018 CLSA_c30140 a304e1d96627f350466a2ae07d71eb74 185 SUPERFAMILY SSF54060 3 102 1.77E-28 T 12-10-2018 CLSA_c30140 a304e1d96627f350466a2ae07d71eb74 185 Pfam PF07463 NUMOD4 motif 3 47 5.2E-16 T 12-10-2018 IPR010902 NUMOD4 GO:0016788 CLSA_c30140 a304e1d96627f350466a2ae07d71eb74 185 Gene3D G3DSA:3.90.75.20 4 107 7.5E-37 T 12-10-2018 CLSA_c38230 433167dca49cd5660fa1e14ec2719a43 256 PIRSF PIRSF018982 7 256 2.6E-93 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLSA_c38230 433167dca49cd5660fa1e14ec2719a43 256 Gene3D G3DSA:1.10.30.40 6 72 9.1E-27 T 12-10-2018 CLSA_c38230 433167dca49cd5660fa1e14ec2719a43 256 Gene3D G3DSA:3.40.50.11240 74 254 8.7E-60 T 12-10-2018 CLSA_c38230 433167dca49cd5660fa1e14ec2719a43 256 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 19 255 37.794 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLSA_c38230 433167dca49cd5660fa1e14ec2719a43 256 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 31 255 3.1E-78 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLSA_c05800 bcacea061e6eddf3fa2949adce8374f2 253 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c05800 bcacea061e6eddf3fa2949adce8374f2 253 Pfam PF00005 ABC transporter 23 171 1.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c05800 bcacea061e6eddf3fa2949adce8374f2 253 SMART SM00382 32 220 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c05800 bcacea061e6eddf3fa2949adce8374f2 253 SUPERFAMILY SSF52540 3 226 6.93E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05800 bcacea061e6eddf3fa2949adce8374f2 253 Gene3D G3DSA:3.40.50.300 1 252 2.5E-66 T 12-10-2018 CLSA_c37700 10bda0dd0fcf5d4cd824cd29cb8c1b14 269 Pfam PF11155 Domain of unknown function (DUF2935) 10 119 4.5E-24 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 CLSA_c37700 10bda0dd0fcf5d4cd824cd29cb8c1b14 269 Pfam PF11155 Domain of unknown function (DUF2935) 133 249 8.3E-31 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 CLSA_c37700 10bda0dd0fcf5d4cd824cd29cb8c1b14 269 Gene3D G3DSA:1.20.1260.120 2 268 2.5E-89 T 12-10-2018 CLSA_c37700 10bda0dd0fcf5d4cd824cd29cb8c1b14 269 SUPERFAMILY SSF158430 6 127 1.31E-32 T 12-10-2018 CLSA_c37700 10bda0dd0fcf5d4cd824cd29cb8c1b14 269 SUPERFAMILY SSF158430 131 262 4.97E-39 T 12-10-2018 CLSA_c09290 a7787e37c8e5f11024a7833c3a1baf42 386 Pfam PF07282 Putative transposase DNA-binding domain 311 379 2.9E-18 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal CLSA_c09290 a7787e37c8e5f11024a7833c3a1baf42 386 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 264 338 5.5E-12 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal CLSA_c09290 a7787e37c8e5f11024a7833c3a1baf42 386 Pfam PF01385 Probable transposase 175 298 2.3E-14 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLSA_c09290 a7787e37c8e5f11024a7833c3a1baf42 386 Pfam PF12323 Helix-turn-helix domain 2 46 4.6E-18 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain CLSA_c00490 1193d5f4210035d474f912b373991589 174 Gene3D G3DSA:2.40.100.10 3 170 8.1E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c00490 1193d5f4210035d474f912b373991589 174 SUPERFAMILY SSF50891 6 160 2.05E-54 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily CLSA_c00490 1193d5f4210035d474f912b373991589 174 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CLSA_c00490 1193d5f4210035d474f912b373991589 174 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 158 2.1E-50 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c00490 1193d5f4210035d474f912b373991589 174 PIRSF PIRSF001467 2 164 3.6E-41 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CLSA_c00490 1193d5f4210035d474f912b373991589 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 4.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c00490 1193d5f4210035d474f912b373991589 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 4.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c00490 1193d5f4210035d474f912b373991589 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 118 4.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c00490 1193d5f4210035d474f912b373991589 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 4.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 9 143 2.2E-30 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 SUPERFAMILY SSF53271 190 349 1.7E-31 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 SUPERFAMILY SSF53271 10 179 1.87E-24 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 21 350 1.1E-55 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 Gene3D G3DSA:3.40.50.2020 171 328 2.0E-68 T 12-10-2018 CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 Pfam PF00156 Phosphoribosyl transferase domain 184 285 1.3E-13 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 Gene3D G3DSA:3.40.50.2020 20 340 2.0E-68 T 12-10-2018 CLSA_c25790 d94410638b5dcfe872746d6ce1800873 363 SMART SM01400 8 143 0.0017 T 12-10-2018 CLSA_c17710 f2306bcbece1800ae4bbc2c0d9b444c3 593 Pfam PF02574 Homocysteine S-methyltransferase 11 280 1.5E-42 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLSA_c17710 f2306bcbece1800ae4bbc2c0d9b444c3 593 SUPERFAMILY SSF51730 309 591 1.41E-61 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like CLSA_c17710 f2306bcbece1800ae4bbc2c0d9b444c3 593 SUPERFAMILY SSF82282 2 359 1.12E-78 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c17710 f2306bcbece1800ae4bbc2c0d9b444c3 593 Pfam PF02219 Methylenetetrahydrofolate reductase 310 590 4.2E-32 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLSA_c17710 f2306bcbece1800ae4bbc2c0d9b444c3 593 Gene3D G3DSA:3.20.20.220 309 592 1.2E-50 T 12-10-2018 CLSA_c17710 f2306bcbece1800ae4bbc2c0d9b444c3 593 Gene3D G3DSA:3.20.20.330 1 290 6.3E-64 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CLSA_c14650 027d0b8291f87f865fe5d070d13f37f2 154 SUPERFAMILY SSF52121 3 153 2.75E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14650 027d0b8291f87f865fe5d070d13f37f2 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.231 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14650 027d0b8291f87f865fe5d070d13f37f2 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 1.3E-60 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14650 027d0b8291f87f865fe5d070d13f37f2 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 4.7E-58 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14650 027d0b8291f87f865fe5d070d13f37f2 154 Gene3D G3DSA:3.40.50.960 1 154 7.0E-66 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 SUPERFAMILY SSF50104 1 115 2.51E-47 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 PRINTS PR00061 Ribosomal protein L19 signature 88 113 5.4E-42 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 PRINTS PR00061 Ribosomal protein L19 signature 34 63 5.4E-42 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 PRINTS PR00061 Ribosomal protein L19 signature 4 33 5.4E-42 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 PIRSF PIRSF002191 1 116 2.4E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 Gene3D G3DSA:2.30.30.790 5 116 2.0E-14 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 Pfam PF01245 Ribosomal protein L19 4 112 1.3E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.957 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c14010 cf5e8742b606c8e4da1da2d98521b757 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 6.7E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 Pfam PF00230 Major intrinsic protein 4 230 1.9E-41 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 ProSitePatterns PS00221 MIP family signature. 62 70 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 PRINTS PR00783 Major intrinsic protein family signature 213 233 3.7E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 PRINTS PR00783 Major intrinsic protein family signature 44 68 3.7E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.7E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 PRINTS PR00783 Major intrinsic protein family signature 81 100 3.7E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.7E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.7E-42 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 Gene3D G3DSA:1.20.1080.10 1 234 4.7E-73 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 5.9E-54 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CLSA_c15530 ce0362e4c430ff841b502f18edef6f06 234 SUPERFAMILY SSF81338 3 233 8.5E-68 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 8.6E-59 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 Pfam PF01467 Cytidylyltransferase-like 5 133 1.1E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 SUPERFAMILY SSF52374 2 155 5.09E-42 T 12-10-2018 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 62 5.2E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 Gene3D G3DSA:3.40.50.620 1 158 1.1E-54 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.0 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 8.7E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 8.7E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 8.7E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 8.7E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 8.7E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CLSA_c13810 4c33f9d0c1d60cca02082aaf2a1f5e7e 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 2 76 0.008 T 12-10-2018 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 Gene3D G3DSA:3.30.70.100 25 92 3.7E-16 T 12-10-2018 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 SUPERFAMILY SSF55008 25 88 7.85E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 PRINTS PR00944 Copper ion binding protein signature 26 38 5.3E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 PRINTS PR00944 Copper ion binding protein signature 38 51 5.3E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 PRINTS PR00944 Copper ion binding protein signature 74 87 5.3E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 Pfam PF00403 Heavy-metal-associated domain 30 86 5.5E-9 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c23360 8765fb3cfb3937a13fbe384d9a083067 93 ProSitePatterns PS01047 Heavy-metal-associated domain. 31 59 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLSA_c05390 f22468538f7ae50eb829fbd6d7e408e0 453 Gene3D G3DSA:3.40.630.10 186 422 1.1E-47 T 12-10-2018 CLSA_c05390 f22468538f7ae50eb829fbd6d7e408e0 453 SUPERFAMILY SSF53187 33 419 2.86E-54 T 12-10-2018 CLSA_c05390 f22468538f7ae50eb829fbd6d7e408e0 453 Pfam PF04389 Peptidase family M28 217 411 2.5E-39 T 12-10-2018 IPR007484 Peptidase M28 CLSA_c05390 f22468538f7ae50eb829fbd6d7e408e0 453 Gene3D G3DSA:3.40.630.10 22 125 1.1E-5 T 12-10-2018 CLSA_c15200 901a60e2b7a3a512d353fa2b18355a50 439 Pfam PF16325 Peptidase family U32 C-terminal domain 353 434 1.7E-19 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal CLSA_c15200 901a60e2b7a3a512d353fa2b18355a50 439 Pfam PF01136 Peptidase family U32 78 340 4.6E-91 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c15200 901a60e2b7a3a512d353fa2b18355a50 439 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c15200 901a60e2b7a3a512d353fa2b18355a50 439 Gene3D G3DSA:2.40.30.10 351 437 5.9E-20 T 12-10-2018 CLSA_c41120 a58bd3a6acc612155aee03755ecced81 141 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 139 1.3E-36 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41120 a58bd3a6acc612155aee03755ecced81 141 Gene3D G3DSA:3.40.1400.10 1 141 6.6E-43 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41120 a58bd3a6acc612155aee03755ecced81 141 PIRSF PIRSF005384 1 141 6.7E-43 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41120 a58bd3a6acc612155aee03755ecced81 141 Pfam PF02502 Ribose/Galactose Isomerase 3 137 3.2E-42 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c41120 a58bd3a6acc612155aee03755ecced81 141 SUPERFAMILY SSF89623 2 140 5.76E-44 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c02390 02adafc6ba98c34ce77074e7f8df2001 232 SUPERFAMILY SSF53187 45 228 4.39E-46 T 12-10-2018 CLSA_c02390 02adafc6ba98c34ce77074e7f8df2001 232 SMART SM00646 111 224 6.4E-15 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c02390 02adafc6ba98c34ce77074e7f8df2001 232 Gene3D G3DSA:3.40.630.40 33 232 4.3E-56 T 12-10-2018 CLSA_c02390 02adafc6ba98c34ce77074e7f8df2001 232 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 45 226 1.0E-68 T 12-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 CLSA_c02390 02adafc6ba98c34ce77074e7f8df2001 232 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 46 223 1.7E-45 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c07010 d2fcd886daaed94fdaa55d48de9d474f 28 Gene3D G3DSA:3.40.50.720 1 27 4.5E-7 T 12-10-2018 CLSA_c41470 d5dd19f96fa988357bc864c433559405 236 Pfam PF03358 NADPH-dependent FMN reductase 1 147 1.2E-8 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c41470 d5dd19f96fa988357bc864c433559405 236 SUPERFAMILY SSF52218 1 150 3.42E-16 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c41470 d5dd19f96fa988357bc864c433559405 236 Gene3D G3DSA:3.40.50.360 1 236 3.3E-25 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c14870 fcd9c59efee99961fc52ef410270083f 176 SUPERFAMILY SSF46785 5 169 2.56E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c14870 fcd9c59efee99961fc52ef410270083f 176 Gene3D G3DSA:1.10.10.10 2 100 7.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c14870 fcd9c59efee99961fc52ef410270083f 176 Pfam PF03551 Transcriptional regulator PadR-like family 8 79 1.4E-7 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c07080 76ae75d9f0a2958ee9c20145cc2651f5 344 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 342 7.8E-75 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 SUPERFAMILY SSF102114 17 291 5.62E-58 T 12-10-2018 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 PIRSF PIRSF004762 3 339 4.0E-71 T 12-10-2018 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 SMART SM00729 53 254 5.7E-26 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 Gene3D G3DSA:3.20.20.70 2 346 4.1E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 Pfam PF04055 Radical SAM superfamily 57 212 1.2E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 7 339 6.7E-109 T 12-10-2018 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 230 310 2.3E-5 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c25290 4b9b769aaab31bb924fd02cb5ffcc973 347 SMART SM00876 226 316 2.0E-4 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLSA_c28550 2ffe23bece6848c818a6a3cbc7650089 309 Gene3D G3DSA:3.90.550.10 1 237 4.2E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c28550 2ffe23bece6848c818a6a3cbc7650089 309 Pfam PF00535 Glycosyl transferase family 2 7 189 7.5E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c28550 2ffe23bece6848c818a6a3cbc7650089 309 SUPERFAMILY SSF53448 3 291 3.45E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c01900 455459fa8f890e3097598249f444e14d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-15 T 12-10-2018 CLSA_c01900 455459fa8f890e3097598249f444e14d 141 Gene3D G3DSA:3.30.1550.10 2 71 3.1E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CLSA_c01900 455459fa8f890e3097598249f444e14d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 2.1E-65 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01900 455459fa8f890e3097598249f444e14d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.9E-25 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLSA_c01900 455459fa8f890e3097598249f444e14d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.92 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLSA_c01900 455459fa8f890e3097598249f444e14d 141 SUPERFAMILY SSF54747 3 72 1.57E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CLSA_c01900 455459fa8f890e3097598249f444e14d 141 SUPERFAMILY SSF46906 67 140 4.06E-27 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CLSA_c01900 455459fa8f890e3097598249f444e14d 141 Gene3D G3DSA:1.10.10.250 72 140 8.7E-31 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CLSA_c01900 455459fa8f890e3097598249f444e14d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 7.1E-31 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal CLSA_c01900 455459fa8f890e3097598249f444e14d 141 SMART SM00649 9 140 1.2E-86 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLSA_c05710 1bcc9cce31b4cfa6e24a1a37140c3898 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 4.0E-44 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CLSA_c05710 1bcc9cce31b4cfa6e24a1a37140c3898 147 Pfam PF13673 Acetyltransferase (GNAT) domain 29 127 8.6E-20 T 12-10-2018 IPR000182 GNAT domain CLSA_c05710 1bcc9cce31b4cfa6e24a1a37140c3898 147 Gene3D G3DSA:3.40.630.30 4 147 2.3E-44 T 12-10-2018 CLSA_c05710 1bcc9cce31b4cfa6e24a1a37140c3898 147 SUPERFAMILY SSF55729 2 144 4.91E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 SMART SM01390 3 97 2.4E-56 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 SUPERFAMILY SSF55174 3 206 1.01E-69 T 12-10-2018 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 Gene3D G3DSA:1.10.1050.10 6 206 1.2E-86 T 12-10-2018 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.4E-73 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 2.8E-34 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 SMART SM00363 98 160 5.8E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 Gene3D G3DSA:3.10.290.10 97 191 1.2E-86 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.114 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLSA_c02300 749b33a7c0b72e61f0f2091d125f8b39 206 Pfam PF01479 S4 domain 98 145 3.2E-19 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c33480 26403351b0a1cb9d39cd7328461694d8 240 SUPERFAMILY SSF52540 6 229 1.36E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c33480 26403351b0a1cb9d39cd7328461694d8 240 Gene3D G3DSA:3.40.50.300 4 236 2.1E-67 T 12-10-2018 CLSA_c33480 26403351b0a1cb9d39cd7328461694d8 240 SMART SM00382 36 231 2.6E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c33480 26403351b0a1cb9d39cd7328461694d8 240 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c33480 26403351b0a1cb9d39cd7328461694d8 240 Pfam PF00005 ABC transporter 27 175 1.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c26520 f8782f4753c75c3054d4c34558e75c03 138 SUPERFAMILY SSF54862 4 134 1.51E-35 T 12-10-2018 CLSA_c26520 f8782f4753c75c3054d4c34558e75c03 138 Pfam PF00037 4Fe-4S binding domain 4 21 5.9E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c26520 f8782f4753c75c3054d4c34558e75c03 138 Pfam PF13247 4Fe-4S dicluster domain 43 136 7.6E-20 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c26520 f8782f4753c75c3054d4c34558e75c03 138 Gene3D G3DSA:3.30.70.20 24 138 5.1E-27 T 12-10-2018 CLSA_c26520 f8782f4753c75c3054d4c34558e75c03 138 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 80 91 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 Gene3D G3DSA:1.10.287.950 365 693 2.7E-59 T 12-10-2018 CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 SMART SM00283 418 693 9.3E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 Gene3D G3DSA:3.30.450.20 208 300 1.2E-32 T 12-10-2018 CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 492 638 2.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 Pfam PF02743 Cache domain 53 294 7.0E-26 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 SUPERFAMILY SSF58104 364 693 5.23E-63 T 12-10-2018 CLSA_c35810 8fe838d3119bc874f36b6f583abbd03a 694 Gene3D G3DSA:3.30.450.20 108 207 1.2E-32 T 12-10-2018 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 22 2.6E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 2.6E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 355 382 2.6E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 466 5.4E-29 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 Gene3D G3DSA:1.10.287.950 273 507 1.8E-38 T 12-10-2018 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 3.4E-9 T 12-10-2018 IPR029095 NarX-like, N-terminal CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 SUPERFAMILY SSF58104 204 513 5.1E-50 T 12-10-2018 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 Gene3D G3DSA:1.20.1480.50 136 235 9.5E-10 T 12-10-2018 CLSA_c38910 33024a3dac9e937ec81e25cd9eb97cd9 526 SMART SM00283 250 525 1.8E-14 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c39410 bc84a31b2a6630e2ca9962876f88e5bc 473 SUPERFAMILY SSF158682 31 149 9.94E-10 T 12-10-2018 IPR029024 TerB-like CLSA_c39410 bc84a31b2a6630e2ca9962876f88e5bc 473 Gene3D G3DSA:1.10.3680.10 27 161 3.8E-11 T 12-10-2018 IPR029024 TerB-like CLSA_c39410 bc84a31b2a6630e2ca9962876f88e5bc 473 SUPERFAMILY SSF51126 256 467 1.83E-9 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c02060 da11128d400419320117c04d971df499 111 Gene3D G3DSA:3.90.470.10 1 111 4.4E-46 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02060 da11128d400419320117c04d971df499 111 Pfam PF00237 Ribosomal protein L22p/L17e 5 108 9.4E-35 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLSA_c02060 da11128d400419320117c04d971df499 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02060 da11128d400419320117c04d971df499 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.2E-41 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02060 da11128d400419320117c04d971df499 111 SUPERFAMILY SSF54843 1 110 7.06E-42 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CLSA_c02060 da11128d400419320117c04d971df499 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.343 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c03400 efc96ada5b4eae3f5c84474ee4462ce2 224 Pfam PF00005 ABC transporter 23 171 6.3E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c03400 efc96ada5b4eae3f5c84474ee4462ce2 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c03400 efc96ada5b4eae3f5c84474ee4462ce2 224 SMART SM00382 32 220 1.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c03400 efc96ada5b4eae3f5c84474ee4462ce2 224 SUPERFAMILY SSF52540 3 221 5.72E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c03400 efc96ada5b4eae3f5c84474ee4462ce2 224 Gene3D G3DSA:3.40.50.300 1 221 2.9E-66 T 12-10-2018 CLSA_c20040 215f8c26550c821a50a973687d774730 268 Gene3D G3DSA:1.10.155.10 2 72 1.8E-12 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLSA_c20040 215f8c26550c821a50a973687d774730 268 Gene3D G3DSA:3.40.50.150 73 268 6.3E-62 T 12-10-2018 CLSA_c20040 215f8c26550c821a50a973687d774730 268 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 261 1.1E-61 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLSA_c20040 215f8c26550c821a50a973687d774730 268 SUPERFAMILY SSF47757 3 73 2.62E-13 T 12-10-2018 CLSA_c20040 215f8c26550c821a50a973687d774730 268 SUPERFAMILY SSF53335 74 267 6.45E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c20040 215f8c26550c821a50a973687d774730 268 SMART SM00138 6 267 4.8E-84 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20040 215f8c26550c821a50a973687d774730 268 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 9.1E-9 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLSA_c20040 215f8c26550c821a50a973687d774730 268 PIRSF PIRSF000410 2 268 1.8E-82 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR CLSA_c20040 215f8c26550c821a50a973687d774730 268 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 3.2E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20040 215f8c26550c821a50a973687d774730 268 PRINTS PR00996 Glutamate methyltransferase family signature 109 129 3.2E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20040 215f8c26550c821a50a973687d774730 268 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 3.2E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20040 215f8c26550c821a50a973687d774730 268 PRINTS PR00996 Glutamate methyltransferase family signature 28 41 3.2E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20040 215f8c26550c821a50a973687d774730 268 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 3.2E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c20040 215f8c26550c821a50a973687d774730 268 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 3.2E-38 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 57 131 2.7E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 SUPERFAMILY SSF55315 50 129 3.53E-18 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 SMART SM00967 57 132 9.6E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 Gene3D G3DSA:3.30.1330.30 46 128 6.2E-15 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 Gene3D G3DSA:3.40.1280.10 129 295 2.7E-58 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 SUPERFAMILY SSF75217 120 295 6.54E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 Pfam PF00588 SpoU rRNA Methylase family 149 289 7.7E-44 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLSA_c01820 4a6cc2d31af8d09efeae33b42558394d 297 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 56 293 6.9E-84 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 Pfam PF02080 TrkA-C domain 137 206 4.2E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 SMART SM00345 15 74 2.8E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.6E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 Gene3D G3DSA:1.10.10.10 8 131 7.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 SUPERFAMILY SSF46785 10 78 3.31E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 Gene3D G3DSA:3.30.70.1450 136 207 8.2E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CLSA_c14670 087476294f11520a4be1ea129404a8c1 208 SUPERFAMILY SSF116726 134 206 5.36E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CLSA_c22120 419647c059189a59ed043b9486d49828 264 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 261 3.0E-109 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CLSA_c22120 419647c059189a59ed043b9486d49828 264 Pfam PF03609 PTS system sorbose-specific iic component 4 234 4.4E-76 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CLSA_c40780 d8be34881fd20863a5c4425262b0bd38 415 SUPERFAMILY SSF52096 39 409 5.3E-27 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c40780 d8be34881fd20863a5c4425262b0bd38 415 Pfam PF03572 Peptidase family S41 248 391 2.8E-7 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CLSA_c40780 d8be34881fd20863a5c4425262b0bd38 415 Gene3D G3DSA:3.90.226.10 236 390 7.7E-17 T 12-10-2018 CLSA_c39440 526af35fbf1625e8000280c5bfd7f1c2 59 Pfam PF14070 Putative motility protein 3 57 3.6E-17 T 12-10-2018 IPR025906 Putative motility protein CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 SUPERFAMILY SSF51246 331 444 4.34E-42 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 1.0E-37 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 SUPERFAMILY SSF52440 1 111 5.04E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 SMART SM00878 336 442 4.5E-56 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 Gene3D G3DSA:3.40.50.20 1 85 1.7E-36 T 12-10-2018 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 Gene3D G3DSA:3.30.470.20 87 441 3.4E-154 T 12-10-2018 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.2E-220 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 SUPERFAMILY SSF56059 83 351 2.12E-70 T 12-10-2018 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 5.7E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLSA_c13160 4f5cf477599bea0c1a7f877d06c350a0 450 Gene3D G3DSA:3.30.1490.20 131 202 3.4E-154 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CLSA_c08490 13df7e9da4d10e08b46d54247b7c2e02 283 PIRSF PIRSF036979 1 283 3.8E-94 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 CLSA_c08490 13df7e9da4d10e08b46d54247b7c2e02 283 Pfam PF00491 Arginase family 19 277 1.1E-76 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 CLSA_c08490 13df7e9da4d10e08b46d54247b7c2e02 283 SUPERFAMILY SSF52768 4 280 5.58E-80 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily CLSA_c08490 13df7e9da4d10e08b46d54247b7c2e02 283 TIGRFAM TIGR01230 agmatinase: agmatinase 8 278 4.8E-83 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CLSA_c08490 13df7e9da4d10e08b46d54247b7c2e02 283 ProSitePatterns PS01053 Arginase family signature. 208 229 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CLSA_c08490 13df7e9da4d10e08b46d54247b7c2e02 283 Gene3D G3DSA:3.40.800.10 12 283 2.3E-94 T 12-10-2018 CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 PIRSF PIRSF001413 2 391 6.7E-165 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 388 50.639 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 3 386 5.6E-190 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 Gene3D G3DSA:3.40.50.1100 7 202 3.9E-181 T 12-10-2018 CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 Gene3D G3DSA:3.40.50.1100 50 381 3.9E-181 T 12-10-2018 CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 SUPERFAMILY SSF53686 2 387 7.73E-142 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 50 375 1.5E-42 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CLSA_c23570 aed740a404533140d6b6e15ea6b0bcf6 391 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 77 91 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 62 1.2E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 Pfam PF01799 [2Fe-2S] binding domain 72 142 2.4E-21 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 Gene3D G3DSA:1.10.150.120 76 151 1.1E-21 T 12-10-2018 CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 SUPERFAMILY SSF47741 73 149 1.44E-23 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 SUPERFAMILY SSF54292 1 77 6.95E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CLSA_c18360 4901acc307cdd7d05bb288b8957f1b0c 152 Gene3D G3DSA:3.10.20.30 1 75 2.4E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 ProSitePatterns PS00760 Signal peptidases I lysine active site. 90 102 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 SUPERFAMILY SSF51306 38 179 1.92E-43 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 21 173 1.5E-44 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 ProSitePatterns PS00761 Signal peptidases I signature 3. 136 149 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 38 54 2.1E-19 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 131 150 2.1E-19 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 88 100 2.1E-19 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 Pfam PF00717 Peptidase S24-like 44 111 9.7E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CLSA_c07120 7289018e2e5579ebb81565a588cb0d52 182 Gene3D G3DSA:2.10.109.10 68 179 3.2E-33 T 12-10-2018 CLSA_c18450 81394122be91f72751e05ca3c52210a3 453 Pfam PF00860 Permease family 20 399 1.6E-112 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CLSA_c18450 81394122be91f72751e05ca3c52210a3 453 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 428 3.9E-125 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLSA_c18450 81394122be91f72751e05ca3c52210a3 453 TIGRFAM TIGR03173 pbuX: xanthine permease 24 431 2.2E-156 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 CLSA_c18450 81394122be91f72751e05ca3c52210a3 453 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 346 366 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLSA_c11540 13b05d7d9e021d756f023be18a138d3e 336 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c11540 13b05d7d9e021d756f023be18a138d3e 336 SUPERFAMILY SSF54523 11 97 6.43E-7 T 12-10-2018 CLSA_c11540 13b05d7d9e021d756f023be18a138d3e 336 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 6.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c11540 13b05d7d9e021d756f023be18a138d3e 336 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 7.0E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 SUPERFAMILY SSF69360 134 266 2.75E-41 T 12-10-2018 CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 SUPERFAMILY SSF69360 28 151 6.18E-41 T 12-10-2018 CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Gene3D G3DSA:2.10.270.10 200 278 9.4E-14 T 12-10-2018 CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 129 147 4.9E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 50 67 0.014 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 89 107 1.7E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 169 187 8.3E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 69 87 1.3E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 109 127 1.3E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 149 167 1.3E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Pfam PF01473 Putative cell wall binding repeat 189 207 3.1E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Gene3D G3DSA:2.10.270.10 158 199 6.0E-17 T 12-10-2018 CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Gene3D G3DSA:2.10.270.10 103 157 2.1E-19 T 12-10-2018 CLSA_c42160 474ac237245c41615c8436c8f2e3df54 424 Gene3D G3DSA:2.10.270.10 29 102 2.8E-21 T 12-10-2018 CLSA_c18510 b743370e56117ba0df0751834be749e7 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 116 2.7E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLSA_c18510 b743370e56117ba0df0751834be749e7 120 Gene3D G3DSA:3.10.180.10 2 120 7.9E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c18510 b743370e56117ba0df0751834be749e7 120 SUPERFAMILY SSF54593 1 118 1.01E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c06360 42036daa98dd8835f005028f58f69aa8 1411 Pfam PF04286 Protein of unknown function (DUF445) 16 331 5.4E-16 T 12-10-2018 IPR007383 Protein of unknown function DUF445 CLSA_c06360 42036daa98dd8835f005028f58f69aa8 1411 Pfam PF04286 Protein of unknown function (DUF445) 710 932 2.8E-8 T 12-10-2018 IPR007383 Protein of unknown function DUF445 CLSA_c15190 cb319aa21c2b4361bce881335b05e372 188 Gene3D G3DSA:2.20.180.10 154 188 1.4E-17 T 12-10-2018 IPR023312 Putatuve nitroreductase, C-terminal, bacterial CLSA_c15190 cb319aa21c2b4361bce881335b05e372 188 SUPERFAMILY SSF55469 3 186 3.66E-33 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c15190 cb319aa21c2b4361bce881335b05e372 188 Gene3D G3DSA:3.40.109.10 1 153 6.7E-37 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c15190 cb319aa21c2b4361bce881335b05e372 188 Pfam PF00881 Nitroreductase family 6 150 3.5E-17 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c07420 93627b8e6c6130e879661b0bfa396fc3 243 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c07420 93627b8e6c6130e879661b0bfa396fc3 243 SMART SM00382 27 213 1.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c07420 93627b8e6c6130e879661b0bfa396fc3 243 PIRSF PIRSF039085 1 241 2.7E-118 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLSA_c07420 93627b8e6c6130e879661b0bfa396fc3 243 Gene3D G3DSA:3.40.50.300 1 242 4.5E-83 T 12-10-2018 CLSA_c07420 93627b8e6c6130e879661b0bfa396fc3 243 SUPERFAMILY SSF52540 3 235 4.94E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c07420 93627b8e6c6130e879661b0bfa396fc3 243 Pfam PF00005 ABC transporter 18 165 9.7E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c14510 b3004a511f14a8a36709556ceb9a0497 235 Gene3D G3DSA:3.90.226.10 35 222 1.7E-34 T 12-10-2018 CLSA_c14510 b3004a511f14a8a36709556ceb9a0497 235 SUPERFAMILY SSF52096 36 228 9.8E-39 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c14510 b3004a511f14a8a36709556ceb9a0497 235 Pfam PF00574 Clp protease 47 220 5.8E-29 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 97 128 2.2E-6 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 63 97 3.8E-13 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 169 200 2.8E-7 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 135 165 4.9E-7 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 235 269 9.0E-13 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 202 235 1.4E-12 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 27 58 2.9E-5 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 Pfam PF14903 WG containing repeat 269 297 1.7E-5 T 12-10-2018 IPR032774 WG containing repeat CLSA_c19600 16aa168fb614e0520ee8bb242e0b0d54 320 SUPERFAMILY SSF69360 24 290 1.28E-12 T 12-10-2018 CLSA_c26000 bd5e59fe9547206e0a0b6a0991caa061 173 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 140 1.8E-29 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLSA_c10360 12fb1e02e4e7a1fed96965363a6d3308 277 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 149 264 9.2E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10360 12fb1e02e4e7a1fed96965363a6d3308 277 SUPERFAMILY SSF103190 31 112 7.06E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c10360 12fb1e02e4e7a1fed96965363a6d3308 277 SUPERFAMILY SSF58104 111 271 2.22E-41 T 12-10-2018 CLSA_c10360 12fb1e02e4e7a1fed96965363a6d3308 277 SMART SM00283 95 277 1.9E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10360 12fb1e02e4e7a1fed96965363a6d3308 277 Gene3D G3DSA:1.10.287.950 100 276 1.6E-36 T 12-10-2018 CLSA_c06130 0bb6fc72c68b7d5158e9031ced842f84 282 Gene3D G3DSA:2.40.10.340 119 270 7.8E-38 T 12-10-2018 CLSA_c06130 0bb6fc72c68b7d5158e9031ced842f84 282 Pfam PF04085 rod shape-determining protein MreC 121 271 2.7E-35 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CLSA_c06130 0bb6fc72c68b7d5158e9031ced842f84 282 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 5 274 4.2E-37 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CLSA_c06130 0bb6fc72c68b7d5158e9031ced842f84 282 Gene3D G3DSA:2.40.10.350 178 259 7.8E-38 T 12-10-2018 CLSA_c06130 0bb6fc72c68b7d5158e9031ced842f84 282 PIRSF PIRSF038471 1 282 3.7E-78 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CLSA_c26310 9221c82b5e56520f419b0b6a1776845a 280 SUPERFAMILY SSF56601 5 264 2.97E-64 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c26310 9221c82b5e56520f419b0b6a1776845a 280 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 2.9E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c26310 9221c82b5e56520f419b0b6a1776845a 280 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 2.9E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c26310 9221c82b5e56520f419b0b6a1776845a 280 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 2.9E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c26310 9221c82b5e56520f419b0b6a1776845a 280 Gene3D G3DSA:3.40.710.10 18 279 4.2E-85 T 12-10-2018 CLSA_c26310 9221c82b5e56520f419b0b6a1776845a 280 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 251 2.2E-57 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLSA_c05990 dc97b30db7751f426b58a83ec04e8d80 149 SUPERFAMILY SSF54631 1 131 1.89E-31 T 12-10-2018 CLSA_c05990 dc97b30db7751f426b58a83ec04e8d80 149 Pfam PF00571 CBS domain 12 59 1.6E-10 T 12-10-2018 IPR000644 CBS domain CLSA_c05990 dc97b30db7751f426b58a83ec04e8d80 149 Pfam PF00571 CBS domain 86 127 1.8E-5 T 12-10-2018 IPR000644 CBS domain CLSA_c05990 dc97b30db7751f426b58a83ec04e8d80 149 SMART SM00116 12 60 4.9E-5 T 12-10-2018 IPR000644 CBS domain CLSA_c05990 dc97b30db7751f426b58a83ec04e8d80 149 SMART SM00116 83 129 98.0 T 12-10-2018 IPR000644 CBS domain CLSA_c05990 dc97b30db7751f426b58a83ec04e8d80 149 Gene3D G3DSA:3.10.580.10 1 143 5.6E-47 T 12-10-2018 CLSA_c20310 4929d69cbe952e35b68abfe626a79f2e 315 SUPERFAMILY SSF103481 194 288 6.41E-11 T 12-10-2018 CLSA_c20310 4929d69cbe952e35b68abfe626a79f2e 315 SUPERFAMILY SSF103481 42 143 7.45E-13 T 12-10-2018 CLSA_c20310 4929d69cbe952e35b68abfe626a79f2e 315 Pfam PF00892 EamA-like transporter family 152 288 8.9E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c20310 4929d69cbe952e35b68abfe626a79f2e 315 Pfam PF00892 EamA-like transporter family 8 139 4.9E-24 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c25250 0d9eaccfc153a3b291b5ecdc945a2682 406 Gene3D G3DSA:2.40.30.10 317 405 1.9E-20 T 12-10-2018 CLSA_c25250 0d9eaccfc153a3b291b5ecdc945a2682 406 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c25250 0d9eaccfc153a3b291b5ecdc945a2682 406 Pfam PF01136 Peptidase family U32 78 307 7.8E-94 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c25250 0d9eaccfc153a3b291b5ecdc945a2682 406 Pfam PF16325 Peptidase family U32 C-terminal domain 320 401 1.2E-21 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal CLSA_c25030 bb956632238f8e79d11ecc7ecad7f92f 151 SUPERFAMILY SSF50475 19 147 2.62E-23 T 12-10-2018 CLSA_c25030 bb956632238f8e79d11ecc7ecad7f92f 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 20 97 1.4E-12 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CLSA_c25030 bb956632238f8e79d11ecc7ecad7f92f 151 Gene3D G3DSA:2.30.110.10 16 151 4.5E-39 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 105 116 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 Gene3D G3DSA:2.60.120.1290 296 439 1.1E-143 T 12-10-2018 CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 Pfam PF00082 Subtilase family 100 301 1.1E-10 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 Pfam PF00082 Subtilase family 440 529 6.8E-10 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 Gene3D G3DSA:3.40.50.200 97 557 1.1E-143 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 SUPERFAMILY SSF52743 81 567 1.3E-42 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 176 189 1.4E-11 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 499 515 1.4E-11 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 100 119 1.4E-11 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c11230 2e16e9b254b726987d25b595c42be9d8 618 PIRSF PIRSF037894 1 570 2.1E-244 T 12-10-2018 IPR017310 Peptidase S8A, subtilisin-related, clostridia CLSA_c15020 6a4205db9627b273e5d5abe614f7ccea 95 Pfam PF04456 Protein of unknown function (DUF503) 3 89 3.5E-32 T 12-10-2018 IPR007546 Protein of unknown function DUF503 CLSA_c15020 6a4205db9627b273e5d5abe614f7ccea 95 Gene3D G3DSA:3.30.70.1120 1 95 1.6E-23 T 12-10-2018 IPR036746 TT1725-like superfamily CLSA_c15020 6a4205db9627b273e5d5abe614f7ccea 95 SUPERFAMILY SSF103007 1 91 8.5E-30 T 12-10-2018 IPR036746 TT1725-like superfamily CLSA_c42350 b31d88e12a0f11b854dcbebcea5fa172 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 54 232 3.3E-43 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CLSA_c42350 b31d88e12a0f11b854dcbebcea5fa172 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 59 230 1.5E-61 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CLSA_c09550 fd1b648d931c36c5de2d1115c889b221 662 Pfam PF02687 FtsX-like permease family 88 183 2.3E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c09550 fd1b648d931c36c5de2d1115c889b221 662 PIRSF PIRSF018968 1 662 8.5E-67 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 CLSA_c15810 bd3030d5d8824169051ef9eec32ac130 162 Pfam PF00583 Acetyltransferase (GNAT) family 37 148 3.9E-11 T 12-10-2018 IPR000182 GNAT domain CLSA_c15810 bd3030d5d8824169051ef9eec32ac130 162 SUPERFAMILY SSF55729 13 158 2.36E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c15810 bd3030d5d8824169051ef9eec32ac130 162 Gene3D G3DSA:3.40.630.30 8 111 5.8E-33 T 12-10-2018 CLSA_c37370 1fca203cf86e65592ae15baca3442800 352 Gene3D G3DSA:3.40.50.2300 44 326 8.8E-88 T 12-10-2018 CLSA_c37370 1fca203cf86e65592ae15baca3442800 352 Pfam PF13407 Periplasmic binding protein domain 44 326 2.4E-45 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c37370 1fca203cf86e65592ae15baca3442800 352 SUPERFAMILY SSF53822 42 343 3.93E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c37370 1fca203cf86e65592ae15baca3442800 352 Gene3D G3DSA:3.40.50.2300 155 306 8.8E-88 T 12-10-2018 CLSA_c24830 2d17b2bfe54520de071b0f4617b6d691 261 Pfam PF13556 PucR C-terminal helix-turn-helix domain 190 247 5.1E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain CLSA_c24830 2d17b2bfe54520de071b0f4617b6d691 261 Gene3D G3DSA:1.10.10.2840 143 252 1.7E-10 T 12-10-2018 CLSA_c21340 8453be417d4c2a783a4bf879d08a959f 741 Pfam PF13245 AAA domain 184 417 1.7E-9 T 12-10-2018 CLSA_c21340 8453be417d4c2a783a4bf879d08a959f 741 Gene3D G3DSA:1.10.10.160 273 360 3.2E-19 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily CLSA_c21340 8453be417d4c2a783a4bf879d08a959f 741 Gene3D G3DSA:3.40.50.300 179 416 3.2E-19 T 12-10-2018 CLSA_c21340 8453be417d4c2a783a4bf879d08a959f 741 SUPERFAMILY SSF52540 175 594 2.89E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c03840 57eb5b70dde2473e3ab903f181cf885e 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 2.6E-27 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLSA_c03840 57eb5b70dde2473e3ab903f181cf885e 96 SUPERFAMILY SSF141000 2 93 7.59E-27 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 CLSA_c03840 57eb5b70dde2473e3ab903f181cf885e 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.453 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLSA_c03840 57eb5b70dde2473e3ab903f181cf885e 96 Gene3D G3DSA:1.10.20.60 1 93 1.1E-24 T 12-10-2018 CLSA_c03840 57eb5b70dde2473e3ab903f181cf885e 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 9.4E-16 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLSA_c44150 6d2ac26aacd1076cac1e6ddeafb156db 131 SUPERFAMILY SSF50475 1 125 6.73E-22 T 12-10-2018 CLSA_c44150 6d2ac26aacd1076cac1e6ddeafb156db 131 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 78 2.6E-12 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CLSA_c44150 6d2ac26aacd1076cac1e6ddeafb156db 131 Gene3D G3DSA:2.30.110.10 1 131 1.1E-37 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c06080 284166ad8d73e663a378b960fc2bbef1 194 SUPERFAMILY SSF54001 73 193 1.77E-45 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c06080 284166ad8d73e663a378b960fc2bbef1 194 Gene3D G3DSA:3.90.1720.10 24 187 8.4E-48 T 12-10-2018 CLSA_c06080 284166ad8d73e663a378b960fc2bbef1 194 Pfam PF00877 NlpC/P60 family 87 190 4.8E-27 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain CLSA_c02860 a7642c4398d0abda3730b955d278eac7 448 Gene3D G3DSA:1.20.1600.10 47 229 5.4E-10 T 12-10-2018 CLSA_c02860 a7642c4398d0abda3730b955d278eac7 448 SUPERFAMILY SSF56954 38 217 1.96E-11 T 12-10-2018 CLSA_c02860 a7642c4398d0abda3730b955d278eac7 448 Gene3D G3DSA:1.20.1600.10 285 438 2.0E-7 T 12-10-2018 CLSA_c02860 a7642c4398d0abda3730b955d278eac7 448 SUPERFAMILY SSF56954 342 435 1.28E-8 T 12-10-2018 CLSA_c02860 a7642c4398d0abda3730b955d278eac7 448 Pfam PF02321 Outer membrane efflux protein 335 432 3.8E-8 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CLSA_c44730 2f07eafd43424026beb1a795d015c997 414 Pfam PF00909 Ammonium Transporter Family 10 407 8.2E-124 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CLSA_c44730 2f07eafd43424026beb1a795d015c997 414 TIGRFAM TIGR00836 amt: ammonium transporter 7 407 1.9E-138 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CLSA_c44730 2f07eafd43424026beb1a795d015c997 414 SUPERFAMILY SSF111352 4 388 4.32E-124 T 12-10-2018 CLSA_c44730 2f07eafd43424026beb1a795d015c997 414 Gene3D G3DSA:1.10.3430.10 1 412 3.5E-142 T 12-10-2018 IPR029020 Ammonium/urea transporter CLSA_c44730 2f07eafd43424026beb1a795d015c997 414 ProSitePatterns PS01219 Ammonium transporters signature. 161 186 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CLSA_c32460 2da8f71c27436188a6dfa910ee05ebd0 193 Gene3D G3DSA:3.40.50.150 1 193 1.5E-56 T 12-10-2018 CLSA_c32460 2da8f71c27436188a6dfa910ee05ebd0 193 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 141 2.4E-34 T 12-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 CLSA_c32460 2da8f71c27436188a6dfa910ee05ebd0 193 Pfam PF13847 Methyltransferase domain 32 160 7.0E-12 T 12-10-2018 IPR025714 Methyltransferase domain CLSA_c32460 2da8f71c27436188a6dfa910ee05ebd0 193 SUPERFAMILY SSF53335 11 184 8.85E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c23690 f21ccf0158b7aea70d8277f7ba857dba 399 SUPERFAMILY SSF53474 47 229 1.75E-14 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c23690 f21ccf0158b7aea70d8277f7ba857dba 399 Pfam PF11187 Protein of unknown function (DUF2974) 68 280 1.6E-36 T 12-10-2018 IPR024499 Protein of unknown function DUF2974 CLSA_c23690 f21ccf0158b7aea70d8277f7ba857dba 399 Gene3D G3DSA:3.40.50.1820 88 239 2.2E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 Gene3D G3DSA:3.30.479.30 48 180 7.7E-43 T 12-10-2018 CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 PRINTS PR00721 Stomatin signature 110 127 6.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 PRINTS PR00721 Stomatin signature 154 172 6.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 PRINTS PR00721 Stomatin signature 130 153 6.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 PRINTS PR00721 Stomatin signature 75 96 6.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 PRINTS PR00721 Stomatin signature 173 194 6.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 Pfam PF01145 SPFH domain / Band 7 family 24 193 7.6E-39 T 12-10-2018 IPR001107 Band 7 domain CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 SUPERFAMILY SSF117892 51 185 1.29E-40 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily CLSA_c12900 6d0ceaf5056978d71441e12493a7b6b9 315 SMART SM00244 20 178 4.0E-53 T 12-10-2018 IPR001107 Band 7 domain CLSA_c33870 5bfb1bb9ef9e1f08f88a0f9ad46a2a4e 128 SUPERFAMILY SSF46785 5 78 1.17E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c33870 5bfb1bb9ef9e1f08f88a0f9ad46a2a4e 128 SMART SM00345 16 75 9.9E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c33870 5bfb1bb9ef9e1f08f88a0f9ad46a2a4e 128 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.4E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c33870 5bfb1bb9ef9e1f08f88a0f9ad46a2a4e 128 Gene3D G3DSA:1.10.10.10 8 123 3.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c23590 610af421b8cfa1c74f5e4408a2fdbcab 271 SUPERFAMILY SSF51366 2 258 2.0E-75 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c23590 610af421b8cfa1c74f5e4408a2fdbcab 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 259 1.4E-77 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CLSA_c23590 610af421b8cfa1c74f5e4408a2fdbcab 271 Gene3D G3DSA:3.20.20.70 1 267 3.9E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c23590 610af421b8cfa1c74f5e4408a2fdbcab 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 60 78 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CLSA_c15250 225fe2e4df7fc4b9e5e68d05243e7c7e 181 SUPERFAMILY SSF48317 5 174 5.76E-41 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLSA_c15250 225fe2e4df7fc4b9e5e68d05243e7c7e 181 Pfam PF01569 PAP2 superfamily 57 172 2.5E-24 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c15250 225fe2e4df7fc4b9e5e68d05243e7c7e 181 Gene3D G3DSA:1.20.144.10 87 181 1.1E-23 T 12-10-2018 CLSA_c15250 225fe2e4df7fc4b9e5e68d05243e7c7e 181 SMART SM00014 57 168 2.7E-27 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c08520 5c9c1884a26ecd58c541a4c6e8867bbd 330 SUPERFAMILY SSF51735 1 327 4.16E-99 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c08520 5c9c1884a26ecd58c541a4c6e8867bbd 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 1.1E-62 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CLSA_c08520 5c9c1884a26ecd58c541a4c6e8867bbd 330 Gene3D G3DSA:3.90.25.10 173 306 4.9E-129 T 12-10-2018 CLSA_c08520 5c9c1884a26ecd58c541a4c6e8867bbd 330 Gene3D G3DSA:3.40.50.720 3 252 4.9E-129 T 12-10-2018 CLSA_c08520 5c9c1884a26ecd58c541a4c6e8867bbd 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 326 2.5E-135 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLSA_c07510 101bddf947b4afed717d5cff578b25e3 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 316 5.5E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c42430 562aaf607aa9ec28bf02b8f5ac80b15a 324 Pfam PF01473 Putative cell wall binding repeat 287 306 6.3E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42430 562aaf607aa9ec28bf02b8f5ac80b15a 324 Pfam PF01473 Putative cell wall binding repeat 267 285 3.5E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42430 562aaf607aa9ec28bf02b8f5ac80b15a 324 Gene3D G3DSA:2.10.270.10 166 324 4.2E-24 T 12-10-2018 CLSA_c42430 562aaf607aa9ec28bf02b8f5ac80b15a 324 SUPERFAMILY SSF69360 162 323 3.4E-23 T 12-10-2018 CLSA_c34900 d27327ab718767efa77c971c222cf5b5 292 Gene3D G3DSA:1.10.4200.10 164 287 6.5E-10 T 12-10-2018 CLSA_c34900 d27327ab718767efa77c971c222cf5b5 292 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 15 281 1.7E-89 T 12-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CLSA_c34900 d27327ab718767efa77c971c222cf5b5 292 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 14 292 120.055 T 12-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CLSA_c34900 d27327ab718767efa77c971c222cf5b5 292 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 18 280 1.1E-76 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CLSA_c25140 daa06167d1e9e8fa3536a191dd2f3f32 258 Gene3D G3DSA:3.20.20.70 1 257 4.6E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c25140 daa06167d1e9e8fa3536a191dd2f3f32 258 SUPERFAMILY SSF110399 6 238 2.22E-73 T 12-10-2018 CLSA_c25140 daa06167d1e9e8fa3536a191dd2f3f32 258 Hamap MF_00443 Thiazole synthase [thiG]. 7 257 38.653 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CLSA_c25140 daa06167d1e9e8fa3536a191dd2f3f32 258 Pfam PF05690 Thiazole biosynthesis protein ThiG 10 251 3.1E-99 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CLSA_c25550 8674cbe1c0de25702afc0483688fe627 66 Gene3D G3DSA:1.10.8.910 7 66 1.1E-24 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c25550 8674cbe1c0de25702afc0483688fe627 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 45 59 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c25550 8674cbe1c0de25702afc0483688fe627 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 22 31 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c25550 8674cbe1c0de25702afc0483688fe627 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 66 3.5E-26 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c38990 d6dc1fee2d89ae6bad0791b5321acb7f 345 SUPERFAMILY SSF53850 34 341 3.33E-88 T 12-10-2018 CLSA_c38990 d6dc1fee2d89ae6bad0791b5321acb7f 345 Gene3D G3DSA:3.40.190.10 127 339 5.7E-131 T 12-10-2018 CLSA_c38990 d6dc1fee2d89ae6bad0791b5321acb7f 345 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 158 166 - T 12-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CLSA_c38990 d6dc1fee2d89ae6bad0791b5321acb7f 345 Gene3D G3DSA:3.40.190.10 40 308 5.7E-131 T 12-10-2018 CLSA_c38990 d6dc1fee2d89ae6bad0791b5321acb7f 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 33 340 2.1E-140 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CLSA_c38990 d6dc1fee2d89ae6bad0791b5321acb7f 345 Pfam PF13531 Bacterial extracellular solute-binding protein 46 293 7.8E-44 T 12-10-2018 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 1.0E-73 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 23.274 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 1.2E-19 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 1.3E-26 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 PIRSF PIRSF000193 3 269 6.0E-76 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 Gene3D G3DSA:3.40.50.720 2 165 3.6E-47 T 12-10-2018 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 SUPERFAMILY SSF48179 162 269 4.59E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 Gene3D G3DSA:1.10.3730.10 166 269 4.1E-28 T 12-10-2018 CLSA_c05490 affcdb89ee16f56ef75fc8e6384d4852 269 SUPERFAMILY SSF51735 5 161 2.95E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c00290 6618650685a03c8dacacd023dd4ae700 249 Gene3D G3DSA:1.10.1660.10 2 118 1.3E-16 T 12-10-2018 CLSA_c00290 6618650685a03c8dacacd023dd4ae700 249 Pfam PF00376 MerR family regulatory protein 7 41 1.8E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c00290 6618650685a03c8dacacd023dd4ae700 249 SMART SM00422 7 74 0.0048 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c00290 6618650685a03c8dacacd023dd4ae700 249 SUPERFAMILY SSF46955 6 105 8.7E-15 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 Gene3D G3DSA:1.10.3860.10 1 419 3.1E-131 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 SUPERFAMILY SSF118215 8 404 9.42E-124 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 298 321 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 9.5E-47 T 12-10-2018 CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CLSA_c21640 2fc2d3874782350aaf65c40b81829e48 423 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 1.5E-118 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLSA_c15800 f8fd158e948b3b860fb8a749eaca2e07 489 PIRSF PIRSF005943 1 488 4.2E-154 T 12-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 CLSA_c15800 f8fd158e948b3b860fb8a749eaca2e07 489 SUPERFAMILY SSF51690 179 485 4.51E-37 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLSA_c15800 f8fd158e948b3b860fb8a749eaca2e07 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 181 446 5.4E-45 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CLSA_c15800 f8fd158e948b3b860fb8a749eaca2e07 489 Gene3D G3DSA:3.20.20.70 146 413 4.0E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c22550 b6ce7a7b4512b7fe5fd9b15b9a604ea5 169 SUPERFAMILY SSF56801 14 159 8.11E-22 T 12-10-2018 CLSA_c22550 b6ce7a7b4512b7fe5fd9b15b9a604ea5 169 Gene3D G3DSA:3.40.50.980 21 167 6.3E-32 T 12-10-2018 CLSA_c22550 b6ce7a7b4512b7fe5fd9b15b9a604ea5 169 Pfam PF00501 AMP-binding enzyme 32 163 1.1E-19 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 Gene3D G3DSA:3.40.1350.30 125 285 9.6E-111 T 12-10-2018 CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 18 443 7.4E-97 T 12-10-2018 CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 SUPERFAMILY SSF53335 67 450 7.17E-80 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 Gene3D G3DSA:3.40.50.150 79 445 9.6E-111 T 12-10-2018 CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 206 450 3.4E-23 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 SUPERFAMILY SSF50249 2 56 5.71E-7 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c06530 5b7900ebd42fe188799a37b7fb062164 451 Gene3D G3DSA:2.40.50.140 1 77 3.1E-14 T 12-10-2018 CLSA_c08590 0d124b47121bb6017274a543f5ad7112 241 Gene3D G3DSA:3.40.50.300 1 240 1.1E-79 T 12-10-2018 CLSA_c08590 0d124b47121bb6017274a543f5ad7112 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c08590 0d124b47121bb6017274a543f5ad7112 241 PIRSF PIRSF039085 1 241 7.3E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLSA_c08590 0d124b47121bb6017274a543f5ad7112 241 Pfam PF00005 ABC transporter 17 165 5.2E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c08590 0d124b47121bb6017274a543f5ad7112 241 SUPERFAMILY SSF52540 2 235 4.28E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c08590 0d124b47121bb6017274a543f5ad7112 241 SMART SM00382 26 213 4.0E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c07630 e11af9dd46ab54b9cb121744c9c68c60 83 SUPERFAMILY SSF55021 2 80 5.95E-26 T 12-10-2018 CLSA_c07630 e11af9dd46ab54b9cb121744c9c68c60 83 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 4 79 2.7E-35 T 12-10-2018 IPR023860 [FeFe]-hydrogenase system regulator TM1266 CLSA_c07630 e11af9dd46ab54b9cb121744c9c68c60 83 Gene3D G3DSA:3.30.70.1150 1 83 2.9E-33 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CLSA_c10400 61fde49653ac875e8fb314b454056485 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 7.0E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c10400 61fde49653ac875e8fb314b454056485 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 7.0E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c10400 61fde49653ac875e8fb314b454056485 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c10400 61fde49653ac875e8fb314b454056485 259 SMART SM01134 79 240 2.7E-48 T 12-10-2018 CLSA_c10400 61fde49653ac875e8fb314b454056485 259 SUPERFAMILY SSF46785 6 63 4.31E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c10400 61fde49653ac875e8fb314b454056485 259 SUPERFAMILY SSF100950 80 240 5.02E-23 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c10400 61fde49653ac875e8fb314b454056485 259 Pfam PF08220 DeoR-like helix-turn-helix domain 7 60 2.4E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c10400 61fde49653ac875e8fb314b454056485 259 SMART SM00420 7 59 1.0E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLSA_c10400 61fde49653ac875e8fb314b454056485 259 Gene3D G3DSA:1.10.10.10 1 68 1.2E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10400 61fde49653ac875e8fb314b454056485 259 Pfam PF00455 DeoR C terminal sensor domain 81 239 3.3E-42 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain CLSA_c14050 a1ca815039714f421f120a7379a7188a 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 102 9.1E-23 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 CLSA_c14050 a1ca815039714f421f120a7379a7188a 122 SUPERFAMILY SSF52980 11 108 2.15E-23 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLSA_c14050 a1ca815039714f421f120a7379a7188a 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 115 18.4 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 CLSA_c14050 a1ca815039714f421f120a7379a7188a 122 Gene3D G3DSA:3.40.1350.10 11 122 1.1E-25 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CLSA_c28880 6731ad5174857e534df6e92e5337baa6 265 SUPERFAMILY SSF51219 6 246 1.05E-81 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily CLSA_c28880 6731ad5174857e534df6e92e5337baa6 265 Gene3D G3DSA:3.60.160.10 1 251 1.0E-100 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily CLSA_c28880 6731ad5174857e534df6e92e5337baa6 265 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 7 226 1.8E-32 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 CLSA_c28880 6731ad5174857e534df6e92e5337baa6 265 Pfam PF01987 Mitochondrial biogenesis AIM24 8 226 2.8E-66 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SUPERFAMILY SSF53098 309 460 1.74E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SUPERFAMILY SSF158832 2 308 1.23E-109 T 12-10-2018 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SMART SM00316 646 717 3.6E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SUPERFAMILY SSF50249 632 720 1.22E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Gene3D G3DSA:1.10.3500.10 111 489 1.9E-147 T 12-10-2018 IPR023323 Tex-like domain superfamily CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SUPERFAMILY SSF47781 551 629 2.45E-18 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SMART SM00732 313 415 7.4E-33 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 SUPERFAMILY SSF47781 461 547 1.45E-25 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Gene3D G3DSA:3.30.420.140 312 442 1.9E-147 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Pfam PF12836 Helix-hairpin-helix motif 482 546 4.8E-27 T 12-10-2018 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Pfam PF00575 S1 RNA binding domain 646 717 2.3E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Pfam PF16921 Tex protein YqgF-like domain 313 442 1.7E-52 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Gene3D G3DSA:2.40.50.140 632 720 1.1E-27 T 12-10-2018 CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Gene3D G3DSA:1.10.10.650 1 108 5.7E-38 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Pfam PF09371 Tex-like protein N-terminal domain 8 192 6.8E-68 T 12-10-2018 IPR018974 Tex-like protein, N-terminal CLSA_c05450 af38fa08c48fcf30d4a1caf0ff9575b6 725 Gene3D G3DSA:1.10.150.310 490 627 6.6E-48 T 12-10-2018 CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 SUPERFAMILY SSF51735 6 251 3.31E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.5E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.5E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.5E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.5E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.5E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 Gene3D G3DSA:3.40.50.720 1 252 1.9E-59 T 12-10-2018 CLSA_c03060 857896dc53a0d698d007ee314bfbceba 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.4E-48 T 12-10-2018 CLSA_c15790 70407881debb858fa2591f3fefcfcd8e 179 Gene3D G3DSA:3.40.50.850 1 179 1.9E-25 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c15790 70407881debb858fa2591f3fefcfcd8e 179 SUPERFAMILY SSF52499 1 178 3.79E-24 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c15790 70407881debb858fa2591f3fefcfcd8e 179 Pfam PF00857 Isochorismatase family 4 178 3.9E-15 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 SUPERFAMILY SSF51735 5 143 2.47E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 316 1.3E-31 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 Gene3D G3DSA:3.40.50.720 1 146 7.5E-57 T 12-10-2018 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 315 39.694 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 8.9E-119 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 2.4E-42 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 2.4E-42 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 2.4E-42 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 2.4E-42 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 2.4E-42 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 PIRSF PIRSF000102 3 317 8.6E-106 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 143 7.4E-43 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 Gene3D G3DSA:3.90.110.10 147 316 3.9E-58 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 SUPERFAMILY SSF56327 145 314 3.6E-54 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLSA_c12580 5a08e2fd397d5da7097abb46cff44ed9 317 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 2.5E-13 T 12-10-2018 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 2.5E-13 T 12-10-2018 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 2.5E-13 T 12-10-2018 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 2.5E-13 T 12-10-2018 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 SUPERFAMILY SSF53383 1 394 1.02E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 Gene3D G3DSA:3.40.640.10 62 284 9.7E-142 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 Gene3D G3DSA:3.90.1150.10 25 389 9.7E-142 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c39880 4c89028e685b4b702c3ff5f1123128da 397 Pfam PF00155 Aminotransferase class I and II 31 389 1.4E-76 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c05640 7b0a1fea89cbf0418106fffde4b8ec24 126 Gene3D G3DSA:2.60.320.10 30 124 2.8E-32 T 12-10-2018 IPR038690 NusG, domain 2 superfamily CLSA_c05640 7b0a1fea89cbf0418106fffde4b8ec24 126 Pfam PF07009 NusG domain II 9 117 1.4E-35 T 12-10-2018 IPR024045 NusG, domain 2 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 SMART SM00363 2 62 5.4E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 SUPERFAMILY SSF55120 50 236 1.69E-44 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 Gene3D G3DSA:3.30.70.1560 130 214 1.1E-54 T 12-10-2018 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 229 1.5E-45 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 Pfam PF00849 RNA pseudouridylate synthase 63 197 2.7E-21 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 Pfam PF01479 S4 domain 2 45 5.0E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 Gene3D G3DSA:3.10.290.10 1 60 2.1E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 Gene3D G3DSA:3.30.70.580 63 232 1.1E-54 T 12-10-2018 CLSA_c03800 832db733cbd963b3b6da6eb5da3c97ea 238 SUPERFAMILY SSF55174 3 59 1.0E-9 T 12-10-2018 CLSA_c38660 f5c9895f3b1bbb313b8c03c9ea6744f5 237 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c38660 f5c9895f3b1bbb313b8c03c9ea6744f5 237 Pfam PF01048 Phosphorylase superfamily 16 217 8.2E-39 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLSA_c38660 f5c9895f3b1bbb313b8c03c9ea6744f5 237 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 1.7E-101 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CLSA_c38660 f5c9895f3b1bbb313b8c03c9ea6744f5 237 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 48.024 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CLSA_c38660 f5c9895f3b1bbb313b8c03c9ea6744f5 237 SUPERFAMILY SSF53167 2 233 1.11E-91 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CLSA_c38660 f5c9895f3b1bbb313b8c03c9ea6744f5 237 Gene3D G3DSA:3.40.50.1580 1 237 1.8E-71 T 12-10-2018 CLSA_c18320 a82ec4570357df16eac11b631cc3a609 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 4.2E-77 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLSA_c18320 a82ec4570357df16eac11b631cc3a609 383 Gene3D G3DSA:3.40.50.11890 33 158 4.7E-34 T 12-10-2018 CLSA_c18320 a82ec4570357df16eac11b631cc3a609 383 Gene3D G3DSA:1.20.1270.370 24 224 4.7E-34 T 12-10-2018 CLSA_c18320 a82ec4570357df16eac11b631cc3a609 383 Gene3D G3DSA:3.40.50.11900 239 383 4.4E-35 T 12-10-2018 CLSA_c17410 f02d0e0a121928395b429ee8029a4045 313 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 180 4.5E-35 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLSA_c17410 f02d0e0a121928395b429ee8029a4045 313 SUPERFAMILY SSF52540 5 190 2.64E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17410 f02d0e0a121928395b429ee8029a4045 313 Gene3D G3DSA:3.40.50.300 1 198 5.0E-44 T 12-10-2018 CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Gene3D G3DSA:2.160.10.10 251 437 1.0E-53 T 12-10-2018 CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 40.47 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Gene3D G3DSA:3.90.550.10 2 250 2.4E-74 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 401 429 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 SUPERFAMILY SSF51161 253 436 4.21E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Pfam PF00483 Nucleotidyl transferase 5 216 7.4E-21 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 SUPERFAMILY SSF53448 3 251 5.05E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 451 2.0E-176 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 316 350 2.4E-8 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 426 7.5E-10 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c01060 6b472280a8aba44a10f48fb0cfbe7717 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 298 1.0E-5 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 Pfam PF13527 Acetyltransferase (GNAT) domain 17 150 3.2E-42 T 12-10-2018 CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 SUPERFAMILY SSF55729 16 303 2.71E-80 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 Gene3D G3DSA:3.30.1050.10 305 403 2.4E-138 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 SUPERFAMILY SSF55718 304 413 2.47E-27 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 Pfam PF13530 Sterol carrier protein domain 194 409 7.5E-54 T 12-10-2018 IPR025559 Enhanced intracellular survival protein domain CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 Gene3D G3DSA:3.40.630.30 22 304 2.4E-138 T 12-10-2018 CLSA_c21860 8059b5bfc42d9d1548f7aa38c22dde00 413 Gene3D G3DSA:3.40.630.30 150 413 2.4E-138 T 12-10-2018 CLSA_c04370 ebb924e756bc130fac33bf662c8196a6 66 Pfam PF12841 YvrJ protein family 9 43 3.1E-15 T 12-10-2018 IPR024419 Protein of unknown function YvrJ CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 SUPERFAMILY SSF52374 4 314 1.74E-111 T 12-10-2018 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 480 31.121 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 481 1.1E-157 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 321 2.5E-104 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 Gene3D G3DSA:1.10.10.350 376 487 9.1E-24 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 SUPERFAMILY SSF48163 315 480 2.62E-30 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 9.5E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 9.5E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 9.5E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 9.5E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 9.5E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CLSA_c12690 e8770f1bf286aad9e0c197aa13b27669 487 Gene3D G3DSA:3.40.50.620 1 330 3.4E-143 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 PRINTS PR01035 Tetracycline resistance protein signature 136 158 2.8E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 PRINTS PR01035 Tetracycline resistance protein signature 278 299 2.8E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 PRINTS PR01035 Tetracycline resistance protein signature 106 127 2.8E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 PRINTS PR01035 Tetracycline resistance protein signature 17 33 2.8E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 SUPERFAMILY SSF103473 4 387 1.22E-74 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 Pfam PF07690 Major Facilitator Superfamily 12 241 2.7E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 Gene3D G3DSA:1.20.1250.20 210 393 1.5E-28 T 12-10-2018 CLSA_c28170 c2eb97c37e7fd3b03c0366552dac5585 400 Gene3D G3DSA:1.20.1250.20 3 193 4.9E-37 T 12-10-2018 CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 Gene3D G3DSA:3.30.450.20 140 284 3.8E-29 T 12-10-2018 CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 611 5.4E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 Gene3D G3DSA:1.10.287.950 355 663 1.0E-62 T 12-10-2018 CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 SUPERFAMILY SSF103190 95 165 1.71E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 SMART SM00283 388 649 2.7E-48 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 Pfam PF02743 Cache domain 36 266 1.6E-27 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c37280 63f4b391daa48fb358aa4b7f109c8764 664 SUPERFAMILY SSF58104 333 662 6.67E-61 T 12-10-2018 CLSA_c11220 f561f38de753b2342612b4455102f892 577 SUPERFAMILY SSF52743 32 575 3.16E-44 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c11220 f561f38de753b2342612b4455102f892 577 PIRSF PIRSF037894 2 577 1.3E-237 T 12-10-2018 IPR017310 Peptidase S8A, subtilisin-related, clostridia CLSA_c11220 f561f38de753b2342612b4455102f892 577 PRINTS PR00723 Subtilisin serine protease family (S8) signature 507 523 7.2E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c11220 f561f38de753b2342612b4455102f892 577 PRINTS PR00723 Subtilisin serine protease family (S8) signature 187 200 7.2E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c11220 f561f38de753b2342612b4455102f892 577 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 127 7.2E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c11220 f561f38de753b2342612b4455102f892 577 Pfam PF00082 Subtilase family 446 525 8.5E-6 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c11220 f561f38de753b2342612b4455102f892 577 Gene3D G3DSA:2.60.120.1290 303 446 8.9E-145 T 12-10-2018 CLSA_c11220 f561f38de753b2342612b4455102f892 577 Pfam PF00082 Subtilase family 108 304 1.1E-10 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c11220 f561f38de753b2342612b4455102f892 577 Gene3D G3DSA:3.40.50.200 105 566 8.9E-145 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c44690 fefdb0e30e0becb9c2d2f9256c73e054 140 SUPERFAMILY SSF53062 1 127 6.67E-39 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c44690 fefdb0e30e0becb9c2d2f9256c73e054 140 Pfam PF03610 PTS system fructose IIA component 4 113 5.2E-31 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c44690 fefdb0e30e0becb9c2d2f9256c73e054 140 Gene3D G3DSA:3.40.50.510 1 140 1.3E-42 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c44690 fefdb0e30e0becb9c2d2f9256c73e054 140 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 113 4.1E-42 T 12-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 SUPERFAMILY SSF52540 150 398 2.84E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Gene3D G3DSA:1.20.58.760 409 602 1.3E-71 T 12-10-2018 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Gene3D G3DSA:2.40.50.920 27 104 1.3E-5 T 12-10-2018 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 326 2.9E-45 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Pfam PF01434 Peptidase family M41 389 598 1.2E-77 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 SUPERFAMILY SSF140990 409 600 1.83E-67 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 SMART SM00382 191 330 7.4E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 107 599 4.1E-232 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Gene3D G3DSA:3.40.50.300 145 327 7.6E-70 T 12-10-2018 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 ProSitePatterns PS00674 AAA-protein family signature. 298 316 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Gene3D G3DSA:1.10.8.60 329 406 3.1E-32 T 12-10-2018 CLSA_c01380 3546d14130f62c0997235413dffdcdf5 602 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 602 37.36 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CLSA_c26400 a2c593c49ebf331d343b6feb715ce52a 348 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c26400 a2c593c49ebf331d343b6feb715ce52a 348 SMART SM00382 23 210 4.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c26400 a2c593c49ebf331d343b6feb715ce52a 348 Pfam PF00005 ABC transporter 23 160 4.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c26400 a2c593c49ebf331d343b6feb715ce52a 348 Gene3D G3DSA:3.40.50.300 2 240 1.2E-56 T 12-10-2018 CLSA_c26400 a2c593c49ebf331d343b6feb715ce52a 348 SUPERFAMILY SSF52540 6 238 1.13E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40100 3e988727ed924200ce06706cf72e1de5 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.7E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c40100 3e988727ed924200ce06706cf72e1de5 204 SUPERFAMILY SSF46689 14 76 2.31E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c40100 3e988727ed924200ce06706cf72e1de5 204 Gene3D G3DSA:1.10.357.10 10 204 3.2E-29 T 12-10-2018 CLSA_c40100 3e988727ed924200ce06706cf72e1de5 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c40100 3e988727ed924200ce06706cf72e1de5 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c30270 a0d482c4dca37518f5622b7920ff216a 118 Gene3D G3DSA:1.10.260.40 3 117 6.5E-11 T 12-10-2018 CLSA_c30270 a0d482c4dca37518f5622b7920ff216a 118 Pfam PF01381 Helix-turn-helix 7 60 1.5E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30270 a0d482c4dca37518f5622b7920ff216a 118 SUPERFAMILY SSF47413 1 68 2.68E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c30270 a0d482c4dca37518f5622b7920ff216a 118 SMART SM00530 6 61 8.5E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c19040 99bfcca7ba57fa08275afac2c05ca5a5 260 Gene3D G3DSA:3.40.50.620 1 255 3.3E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c19040 99bfcca7ba57fa08275afac2c05ca5a5 260 SUPERFAMILY SSF52402 1 243 2.23E-60 T 12-10-2018 CLSA_c19040 99bfcca7ba57fa08275afac2c05ca5a5 260 Pfam PF01012 Electron transfer flavoprotein domain 32 212 7.1E-37 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c19040 99bfcca7ba57fa08275afac2c05ca5a5 260 SMART SM00893 22 217 2.1E-39 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c19040 99bfcca7ba57fa08275afac2c05ca5a5 260 PIRSF PIRSF000090 1 260 1.4E-64 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CLSA_c25150 856482cae419970158eaf1fbefc9fa54 269 Pfam PF14453 ThiS-like ubiquitin 1 58 1.2E-18 T 12-10-2018 IPR032726 ThiS-like ubiquitin domain CLSA_c25150 856482cae419970158eaf1fbefc9fa54 269 Pfam PF00899 ThiF family 78 263 6.8E-34 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLSA_c25150 856482cae419970158eaf1fbefc9fa54 269 SUPERFAMILY SSF69572 74 268 4.05E-44 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CLSA_c25150 856482cae419970158eaf1fbefc9fa54 269 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 64 263 1.5E-90 T 12-10-2018 IPR012729 Thiamine biosynthesis protein ThiF CLSA_c25150 856482cae419970158eaf1fbefc9fa54 269 Gene3D G3DSA:3.40.50.720 68 269 3.2E-40 T 12-10-2018 CLSA_c03020 571a73b710457ed137fa05aed5b50e36 442 SUPERFAMILY SSF53383 41 435 9.47E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c03020 571a73b710457ed137fa05aed5b50e36 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c03020 571a73b710457ed137fa05aed5b50e36 442 Gene3D G3DSA:3.90.1150.10 41 429 2.3E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c03020 571a73b710457ed137fa05aed5b50e36 442 Gene3D G3DSA:3.40.640.10 74 339 2.3E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c03020 571a73b710457ed137fa05aed5b50e36 442 Pfam PF00202 Aminotransferase class-III 41 432 2.4E-82 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c36870 5c66d26d0d1a60e0f77022d552c67d09 312 SUPERFAMILY SSF88713 105 311 5.68E-43 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c36870 5c66d26d0d1a60e0f77022d552c67d09 312 Gene3D G3DSA:3.20.20.370 48 312 2.8E-56 T 12-10-2018 CLSA_c36870 5c66d26d0d1a60e0f77022d552c67d09 312 Pfam PF01522 Polysaccharide deacetylase 104 219 3.8E-21 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c03390 7ea94acd3f1622a6266a92415367ffcd 409 Pfam PF02687 FtsX-like permease family 314 401 9.8E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 50.72 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 Gene3D G3DSA:3.40.718.10 1 360 6.4E-151 T 12-10-2018 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 2.9E-160 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 SUPERFAMILY SSF53659 1 357 1.92E-126 T 12-10-2018 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 352 2.6E-141 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 SMART SM01329 4 352 2.6E-206 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLSA_c02710 a9899ebc610c57fd0e9a40632dbd6f1c 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 TIGRFAM TIGR00277 HDIG: HDIG domain 221 301 3.9E-9 T 12-10-2018 IPR006675 HDIG domain CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 SUPERFAMILY SSF109604 212 383 5.46E-32 T 12-10-2018 CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 Gene3D G3DSA:1.10.3210.10 3 184 8.0E-13 T 12-10-2018 CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 Gene3D G3DSA:1.10.3210.10 209 395 2.0E-53 T 12-10-2018 CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 SMART SM00471 23 151 14.0 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 SMART SM00471 219 353 4.8E-11 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 Pfam PF01966 HD domain 29 141 2.0E-5 T 12-10-2018 IPR006674 HD domain CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 Pfam PF01966 HD domain 224 343 1.3E-20 T 12-10-2018 IPR006674 HD domain CLSA_c15840 75479aa0e1b72daea45d1c7494edf4df 417 SUPERFAMILY SSF109604 27 145 1.26E-10 T 12-10-2018 CLSA_c43880 9c89a1da0c0dd33f154c0eabcc0ece67 560 SUPERFAMILY SSF55604 485 557 4.45E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c43880 9c89a1da0c0dd33f154c0eabcc0ece67 560 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 437 543 1.2E-23 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLSA_c43880 9c89a1da0c0dd33f154c0eabcc0ece67 560 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 497 514 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c43880 9c89a1da0c0dd33f154c0eabcc0ece67 560 Pfam PF02378 Phosphotransferase system, EIIC 9 373 5.7E-80 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c43880 9c89a1da0c0dd33f154c0eabcc0ece67 560 Pfam PF00367 phosphotransferase system, EIIB 488 519 1.2E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLSA_c43880 9c89a1da0c0dd33f154c0eabcc0ece67 560 Gene3D G3DSA:3.30.1360.60 480 560 4.2E-29 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 CLSA_c06880 f0e916b5e3ad12b5ab43a735d841e633 337 Gene3D G3DSA:3.20.20.70 76 332 2.8E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c06880 f0e916b5e3ad12b5ab43a735d841e633 337 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 328 1.9E-122 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CLSA_c06880 f0e916b5e3ad12b5ab43a735d841e633 337 Pfam PF00793 DAHP synthetase I family 88 327 2.1E-77 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CLSA_c06880 f0e916b5e3ad12b5ab43a735d841e633 337 Gene3D G3DSA:3.30.70.1140 1 75 2.6E-27 T 12-10-2018 CLSA_c06880 f0e916b5e3ad12b5ab43a735d841e633 337 SUPERFAMILY SSF51569 1 334 4.4E-118 T 12-10-2018 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Gene3D G3DSA:1.20.120.1810 101 139 3.9E-11 T 12-10-2018 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 140 376 2.6E-123 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 168 181 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 337 363 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 PRINTS PR00046 Major sigma-70 factor signature 192 200 2.5E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 PRINTS PR00046 Major sigma-70 factor signature 168 181 2.5E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 PRINTS PR00046 Major sigma-70 factor signature 337 352 2.5E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 PRINTS PR00046 Major sigma-70 factor signature 352 363 2.5E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 PRINTS PR00046 Major sigma-70 factor signature 316 328 2.5E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 SUPERFAMILY SSF88659 217 291 1.8E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 140 365 5.7E-40 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 SUPERFAMILY SSF88659 274 376 1.51E-30 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 24 377 34.311 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Gene3D G3DSA:1.10.601.10 140 216 2.2E-51 T 12-10-2018 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Gene3D G3DSA:1.10.220.120 27 89 3.9E-11 T 12-10-2018 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 SUPERFAMILY SSF88946 105 214 1.96E-53 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Gene3D G3DSA:1.10.10.10 294 377 3.6E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Pfam PF04539 Sigma-70 region 3 223 299 2.0E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Pfam PF04542 Sigma-70 region 2 144 213 3.1E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Pfam PF00140 Sigma-70 factor, region 1.2 106 138 4.6E-16 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Pfam PF04545 Sigma-70, region 4 312 365 4.4E-20 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Gene3D G3DSA:1.10.10.10 217 292 5.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c11080 2bddd7fb53eea0df93bddf195b0dc315 377 Pfam PF03979 Sigma-70 factor, region 1.1 30 91 2.4E-17 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CLSA_c43900 66e67611355960bccb2821cbfcd31236 310 Pfam PF13302 Acetyltransferase (GNAT) domain 142 284 6.8E-19 T 12-10-2018 IPR000182 GNAT domain CLSA_c43900 66e67611355960bccb2821cbfcd31236 310 SUPERFAMILY SSF55729 136 308 1.45E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c43900 66e67611355960bccb2821cbfcd31236 310 Gene3D G3DSA:3.40.630.30 2 129 2.5E-32 T 12-10-2018 CLSA_c43900 66e67611355960bccb2821cbfcd31236 310 Gene3D G3DSA:3.40.630.30 134 310 2.6E-42 T 12-10-2018 CLSA_c43900 66e67611355960bccb2821cbfcd31236 310 SUPERFAMILY SSF55729 18 122 9.8E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c38820 6fbc1ed75d1de5f1e4020a2a3c53b057 45 Pfam PF13165 Six-cysteine peptide SCIFF 2 45 8.5E-21 T 12-10-2018 IPR023975 Six-cysteine peptide SCIFF CLSA_c38820 6fbc1ed75d1de5f1e4020a2a3c53b057 45 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 44 4.4E-23 T 12-10-2018 IPR023975 Six-cysteine peptide SCIFF CLSA_c20370 48dc59cf6ef039e7962940eb3e2f3133 365 SMART SM00267 185 358 1.5E-55 T 12-10-2018 IPR000160 GGDEF domain CLSA_c20370 48dc59cf6ef039e7962940eb3e2f3133 365 SUPERFAMILY SSF55073 201 360 1.18E-46 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c20370 48dc59cf6ef039e7962940eb3e2f3133 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 357 4.4E-52 T 12-10-2018 IPR000160 GGDEF domain CLSA_c20370 48dc59cf6ef039e7962940eb3e2f3133 365 Pfam PF07694 5TMR of 5TMR-LYT 33 168 6.4E-13 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CLSA_c20370 48dc59cf6ef039e7962940eb3e2f3133 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 354 1.9E-44 T 12-10-2018 IPR000160 GGDEF domain CLSA_c20370 48dc59cf6ef039e7962940eb3e2f3133 365 Gene3D G3DSA:3.30.70.270 185 361 5.7E-54 T 12-10-2018 CLSA_c24520 8d96201801182186270a4f8ec048b2ac 242 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c24520 8d96201801182186270a4f8ec048b2ac 242 Gene3D G3DSA:3.40.50.300 2 228 6.5E-55 T 12-10-2018 CLSA_c24520 8d96201801182186270a4f8ec048b2ac 242 Pfam PF00005 ABC transporter 23 155 1.0E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c24520 8d96201801182186270a4f8ec048b2ac 242 SUPERFAMILY SSF52540 8 224 1.69E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c24520 8d96201801182186270a4f8ec048b2ac 242 SMART SM00382 32 203 1.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c14150 bbf7c14092be7d4f065dc4885d15536d 264 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 219 245 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CLSA_c14150 bbf7c14092be7d4f065dc4885d15536d 264 Pfam PF01148 Cytidylyltransferase family 10 260 2.0E-58 T 12-10-2018 CLSA_c42880 7fa5791604ffacbfe7f982c5f89beb4d 341 Pfam PF01594 AI-2E family transporter 16 331 6.0E-44 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like CLSA_c41340 c462d7308373ae8b0abee105876ee2e3 534 Gene3D G3DSA:1.20.58.1690 447 531 1.2E-21 T 12-10-2018 IPR038434 YARHG domain superfamily CLSA_c41340 c462d7308373ae8b0abee105876ee2e3 534 Pfam PF13308 YARHG domain 450 533 8.9E-25 T 12-10-2018 IPR025582 YARHG domain CLSA_c41340 c462d7308373ae8b0abee105876ee2e3 534 SMART SM01324 449 533 1.3E-23 T 12-10-2018 IPR025582 YARHG domain CLSA_c02250 9581b0f1d3f905b96e673713f628132f 96 SUPERFAMILY SSF50104 10 66 1.74E-11 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.9E-15 T 12-10-2018 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.9E-15 T 12-10-2018 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.9E-15 T 12-10-2018 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.9E-15 T 12-10-2018 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 Gene3D G3DSA:3.40.430.10 1 163 5.9E-58 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 Pfam PF00186 Dihydrofolate reductase 1 162 5.4E-62 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 SUPERFAMILY SSF53597 1 163 1.54E-54 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CLSA_c44130 cb01ca698a38f0184e18f383af34f432 163 PIRSF PIRSF000194 1 163 3.4E-57 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CLSA_c33400 7c9e526b27f3ddd3447035460d130d00 185 Pfam PF00293 NUDIX domain 45 176 2.7E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c33400 7c9e526b27f3ddd3447035460d130d00 185 SUPERFAMILY SSF55811 39 179 7.85E-19 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c33400 7c9e526b27f3ddd3447035460d130d00 185 Gene3D G3DSA:3.90.79.10 1 185 5.4E-51 T 12-10-2018 CLSA_c42860 28949c1c5ad8f0cec1ff8f3046d4b387 126 Pfam PF01187 Macrophage migration inhibitory factor (MIF) 32 124 4.9E-8 T 12-10-2018 IPR001398 Macrophage migration inhibitory factor CLSA_c42860 28949c1c5ad8f0cec1ff8f3046d4b387 126 SUPERFAMILY SSF55331 13 126 4.24E-25 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily CLSA_c42860 28949c1c5ad8f0cec1ff8f3046d4b387 126 Gene3D G3DSA:3.30.429.10 10 126 6.3E-39 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily CLSA_c42860 28949c1c5ad8f0cec1ff8f3046d4b387 126 ProDom PD004816 MACROPHAGE MIGRATION INHIBITORY FACTOR TAUTOMERASE MIF PHENYLPYRUVATE CYTOKINE RESPONSE INFLAMMATORY 35 126 9.0E-10 T 12-10-2018 IPR001398 Macrophage migration inhibitory factor CLSA_c01830 247740e1156bf53769c37c6259b8fff0 170 Pfam PF05991 YacP-like NYN domain 4 168 9.5E-54 T 12-10-2018 IPR010298 Protein of unknown function DUF901 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 Gene3D G3DSA:1.10.8.500 341 393 6.2E-10 T 12-10-2018 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 SMART SM00283 424 699 5.7E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 Pfam PF02743 Cache domain 35 305 3.0E-27 T 12-10-2018 IPR033479 Double Cache domain 1 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 Gene3D G3DSA:1.10.287.950 394 699 4.7E-63 T 12-10-2018 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 646 3.2E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 Gene3D G3DSA:3.30.450.20 187 324 2.3E-28 T 12-10-2018 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 Pfam PF00672 HAMP domain 345 391 1.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 SUPERFAMILY SSF58104 363 699 8.5E-70 T 12-10-2018 CLSA_c10620 bab5e2ef60f654d83c2025938798139f 704 SMART SM00304 343 395 9.1E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 Gene3D G3DSA:3.40.50.2300 1 132 1.9E-35 T 12-10-2018 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 SMART SM00448 1 112 4.4E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 3.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 SUPERFAMILY SSF52172 1 118 5.12E-38 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 SUPERFAMILY SSF46894 127 225 2.78E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 SMART SM00862 151 224 1.9E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c03730 59e9310d520ef32a772e16453cfb4111 226 Gene3D G3DSA:1.10.10.10 133 226 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c16060 1342d23f726aa242994e28aa052e0da8 162 Gene3D G3DSA:3.40.630.30 2 162 1.5E-43 T 12-10-2018 CLSA_c16060 1342d23f726aa242994e28aa052e0da8 162 SUPERFAMILY SSF55729 3 148 5.98E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c16060 1342d23f726aa242994e28aa052e0da8 162 Pfam PF00583 Acetyltransferase (GNAT) family 19 140 1.5E-11 T 12-10-2018 IPR000182 GNAT domain CLSA_c43910 185c9a1b5c9a59cd13a382804dda42f9 254 Pfam PF00899 ThiF family 10 247 2.3E-41 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLSA_c43910 185c9a1b5c9a59cd13a382804dda42f9 254 SUPERFAMILY SSF69572 8 252 1.57E-65 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CLSA_c43910 185c9a1b5c9a59cd13a382804dda42f9 254 Gene3D G3DSA:3.40.50.720 2 254 2.8E-81 T 12-10-2018 CLSA_c42730 95695ce097c19972ed98d965f34f0bc2 224 SUPERFAMILY SSF51412 75 203 6.13E-13 T 12-10-2018 CLSA_c42730 95695ce097c19972ed98d965f34f0bc2 224 Gene3D G3DSA:3.20.20.70 49 221 7.3E-13 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c04130 1a5559cb93cd6247a03f440191389e4b 117 SUPERFAMILY SSF47413 2 63 1.95E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c04130 1a5559cb93cd6247a03f440191389e4b 117 Gene3D G3DSA:1.10.260.40 2 114 7.6E-20 T 12-10-2018 CLSA_c04130 1a5559cb93cd6247a03f440191389e4b 117 SMART SM00530 5 60 6.1E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c04130 1a5559cb93cd6247a03f440191389e4b 117 Pfam PF01381 Helix-turn-helix 8 60 7.4E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c14980 b2e142748388fd8fd078fa608f2210f9 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 3.7E-80 T 12-10-2018 IPR003797 DegV CLSA_c14980 b2e142748388fd8fd078fa608f2210f9 282 SUPERFAMILY SSF82549 2 278 1.96E-73 T 12-10-2018 CLSA_c14980 b2e142748388fd8fd078fa608f2210f9 282 Gene3D G3DSA:3.40.50.10170 1 150 7.4E-48 T 12-10-2018 CLSA_c14980 b2e142748388fd8fd078fa608f2210f9 282 Gene3D G3DSA:3.30.1180.10 154 280 8.1E-31 T 12-10-2018 CLSA_c14980 b2e142748388fd8fd078fa608f2210f9 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 3.6E-77 T 12-10-2018 IPR003797 DegV CLSA_c17960 304eda58930e4e4986c3d6c706defca0 133 SMART SM00422 3 72 2.6E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c17960 304eda58930e4e4986c3d6c706defca0 133 Pfam PF13411 MerR HTH family regulatory protein 3 70 7.0E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c17960 304eda58930e4e4986c3d6c706defca0 133 Gene3D G3DSA:1.10.1660.10 1 129 1.0E-35 T 12-10-2018 CLSA_c17960 304eda58930e4e4986c3d6c706defca0 133 SUPERFAMILY SSF46955 3 125 4.4E-32 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 263 282 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 143 168 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 169 192 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PRINTS PR00303 Preprotein translocase SecY subunit signature 396 414 9.8E-74 T 12-10-2018 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 427 26.571 T 12-10-2018 IPR026593 Protein translocase subunit SecY CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 SUPERFAMILY SSF103491 2 418 3.53E-107 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 Gene3D G3DSA:1.10.3370.10 1 423 3.3E-143 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 Pfam PF00344 SecY translocase 69 410 7.2E-99 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 PIRSF PIRSF004557 1 428 5.7E-115 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c02220 14fae8694b573ce2b2c6137b7b0d693b 428 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 422 7.2E-107 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c26770 1f471c789ff40da126381a1782ab5f2c 337 SUPERFAMILY SSF56349 11 324 1.18E-47 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c26770 1f471c789ff40da126381a1782ab5f2c 337 Gene3D G3DSA:1.10.150.130 5 141 5.6E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c26770 1f471c789ff40da126381a1782ab5f2c 337 Gene3D G3DSA:1.10.443.10 142 336 1.1E-40 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c26770 1f471c789ff40da126381a1782ab5f2c 337 Pfam PF00589 Phage integrase family 146 317 1.0E-33 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c26770 1f471c789ff40da126381a1782ab5f2c 337 Pfam PF13102 Phage integrase SAM-like domain 24 124 8.8E-5 T 12-10-2018 IPR025269 Phage integrase SAM-like domain CLSA_c43210 6f45b2e81846cd178bb3be6e00ad7410 284 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 3.1E-36 T 12-10-2018 IPR017039 Virulence factor BrkB CLSA_c43210 6f45b2e81846cd178bb3be6e00ad7410 284 Pfam PF03631 Virulence factor BrkB 24 275 6.2E-59 T 12-10-2018 IPR017039 Virulence factor BrkB CLSA_c43210 6f45b2e81846cd178bb3be6e00ad7410 284 PIRSF PIRSF035875 1 281 2.5E-67 T 12-10-2018 IPR017039 Virulence factor BrkB CLSA_c32080 0c21bc2e53d63199caf676bc876ff71e 184 Hamap MF_01572 UPF0397 protein . 4 184 26.306 T 12-10-2018 IPR022914 Protein of unknown function UPF0397 CLSA_c32080 0c21bc2e53d63199caf676bc876ff71e 184 Gene3D G3DSA:1.10.1760.20 6 183 4.0E-21 T 12-10-2018 CLSA_c32080 0c21bc2e53d63199caf676bc876ff71e 184 Pfam PF07155 ECF-type riboflavin transporter, S component 8 173 1.4E-45 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLSA_c35670 83e7203507644076dd3fcd38900ec19a 137 Gene3D G3DSA:1.20.140.160 2 137 4.1E-6 T 12-10-2018 CLSA_c35670 83e7203507644076dd3fcd38900ec19a 137 SUPERFAMILY SSF88659 70 136 4.3E-8 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 148 429 6.7E-125 T 12-10-2018 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510|MetaCyc: PWY-7769 CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 Gene3D G3DSA:3.20.20.60 135 429 3.2E-75 T 12-10-2018 CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 SUPERFAMILY SSF51621 92 431 1.26E-71 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 Pfam PF13714 Phosphoenolpyruvate phosphomutase 149 406 1.3E-66 T 12-10-2018 CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 65 2.5E-13 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 Gene3D G3DSA:3.40.50.620 1 134 4.3E-28 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 Pfam PF01467 Cytidylyltransferase-like 10 98 1.6E-12 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c08730 a047ca5f0fb9bf533b64b746d5c9d5e3 432 SUPERFAMILY SSF52374 1 126 1.26E-16 T 12-10-2018 CLSA_c43230 9b8fe387a4c93d42c8c5c2f0fe006422 381 PIRSF PIRSF016636 5 380 7.4E-76 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CLSA_c43230 9b8fe387a4c93d42c8c5c2f0fe006422 381 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 5 378 8.6E-149 T 12-10-2018 IPR024024 D-alanyl transfer protein DltB CLSA_c43230 9b8fe387a4c93d42c8c5c2f0fe006422 381 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 103 369 3.4E-20 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT CLSA_c43230 9b8fe387a4c93d42c8c5c2f0fe006422 381 PIRSF PIRSF500216 2 381 5.6E-124 T 12-10-2018 IPR024024 D-alanyl transfer protein DltB CLSA_c25200 acc734ac16ffd238835b54986c335556 346 SUPERFAMILY SSF53474 80 339 5.24E-68 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c25200 acc734ac16ffd238835b54986c335556 346 Gene3D G3DSA:3.40.50.1820 33 341 3.2E-90 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c25200 acc734ac16ffd238835b54986c335556 346 Pfam PF07859 alpha/beta hydrolase fold 110 317 2.0E-72 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CLSA_c22300 e6a0b236676e0ccda3adfde66f10dc99 152 Pfam PF03551 Transcriptional regulator PadR-like family 54 126 7.7E-17 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c22300 e6a0b236676e0ccda3adfde66f10dc99 152 SUPERFAMILY SSF46785 42 135 3.7E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c22300 e6a0b236676e0ccda3adfde66f10dc99 152 Gene3D G3DSA:1.10.10.10 28 145 1.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c05790 0fbb40ce3fcbe345156e4721c55778eb 248 Pfam PF00561 alpha/beta hydrolase fold 20 123 1.0E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CLSA_c05790 0fbb40ce3fcbe345156e4721c55778eb 248 SUPERFAMILY SSF53474 5 247 8.82E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c05790 0fbb40ce3fcbe345156e4721c55778eb 248 Gene3D G3DSA:3.40.50.1820 1 247 2.0E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c37710 bb933210cbf1b3005e752810672324a3 45 Pfam PF03458 UPF0126 domain 3 43 6.9E-10 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 CLSA_c11970 2beb0fc6901742914e6e2962d03a64f9 285 SUPERFAMILY SSF53335 12 267 1.79E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c11970 2beb0fc6901742914e6e2962d03a64f9 285 Gene3D G3DSA:3.40.50.150 9 285 4.1E-68 T 12-10-2018 CLSA_c11970 2beb0fc6901742914e6e2962d03a64f9 285 Pfam PF08241 Methyltransferase domain 102 191 5.6E-10 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CLSA_c11970 2beb0fc6901742914e6e2962d03a64f9 285 PIRSF PIRSF018249 1 285 7.6E-79 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CLSA_c21470 27e3448df79bba6c5e80e3f2e3fd3c29 374 Gene3D G3DSA:2.10.270.10 21 105 7.2E-22 T 12-10-2018 CLSA_c21470 27e3448df79bba6c5e80e3f2e3fd3c29 374 SUPERFAMILY SSF69360 25 116 3.14E-21 T 12-10-2018 CLSA_c21470 27e3448df79bba6c5e80e3f2e3fd3c29 374 Pfam PF01473 Putative cell wall binding repeat 49 66 2.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c21470 27e3448df79bba6c5e80e3f2e3fd3c29 374 Pfam PF01473 Putative cell wall binding repeat 68 86 1.5E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c12920 f51cf946f3aff733ad626cf54ca8d4f7 280 SMART SM00062 49 276 1.7E-68 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c12920 f51cf946f3aff733ad626cf54ca8d4f7 280 SUPERFAMILY SSF53850 8 277 1.57E-70 T 12-10-2018 CLSA_c12920 f51cf946f3aff733ad626cf54ca8d4f7 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 275 1.6E-66 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c12920 f51cf946f3aff733ad626cf54ca8d4f7 280 Gene3D G3DSA:3.40.190.10 50 274 2.7E-74 T 12-10-2018 CLSA_c12920 f51cf946f3aff733ad626cf54ca8d4f7 280 Gene3D G3DSA:3.40.190.10 135 232 2.7E-74 T 12-10-2018 CLSA_c12920 f51cf946f3aff733ad626cf54ca8d4f7 280 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 72 85 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 SUPERFAMILY SSF47973 7 149 7.19E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 PIRSF PIRSF002122 4 156 2.5E-57 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-68 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.057 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 Gene3D G3DSA:1.10.455.10 2 155 4.3E-61 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CLSA_c01970 6e5b6f8a99604784c2fe09e7faa9c8c2 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 1.5E-65 T 12-10-2018 IPR023798 Ribosomal protein S7 domain CLSA_c24270 6ab2046fdba4cc7bc59325f603fe04b3 238 SMART SM00770 1 237 5.1E-46 T 12-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CLSA_c24270 6ab2046fdba4cc7bc59325f603fe04b3 238 Pfam PF00882 Zinc dependent phospholipase C 33 174 4.9E-15 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 CLSA_c24270 6ab2046fdba4cc7bc59325f603fe04b3 238 Gene3D G3DSA:1.10.575.10 27 235 1.7E-37 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 CLSA_c24270 6ab2046fdba4cc7bc59325f603fe04b3 238 SUPERFAMILY SSF48537 25 233 2.22E-42 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 CLSA_c24270 6ab2046fdba4cc7bc59325f603fe04b3 238 ProDom PD003946 PHOSPHOLIPASE C PLCB HYDROLASE PRECURSOR PHOSPHATIDYLCHOLINE SIGNAL CHOLINEPHOSPHOHYDROLASE TOXIN PLC 33 225 2.0E-7 T 12-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CLSA_c10670 264dbd9cc933485cb9c780a25d3f3da5 143 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 2 141 37.158 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 CLSA_c10670 264dbd9cc933485cb9c780a25d3f3da5 143 Gene3D G3DSA:3.30.565.10 2 141 2.0E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c10670 264dbd9cc933485cb9c780a25d3f3da5 143 Pfam PF13581 Histidine kinase-like ATPase domain 19 137 1.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c10670 264dbd9cc933485cb9c780a25d3f3da5 143 SMART SM00387 36 141 4.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c10670 264dbd9cc933485cb9c780a25d3f3da5 143 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 3 138 1.3E-67 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 CLSA_c10670 264dbd9cc933485cb9c780a25d3f3da5 143 SUPERFAMILY SSF55874 33 135 3.67E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06090 d75ff78cece13fac0bb57d023db1f79a 223 SUPERFAMILY SSF110997 66 127 2.62E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CLSA_c06090 d75ff78cece13fac0bb57d023db1f79a 223 Gene3D G3DSA:3.30.70.1070 68 132 7.0E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CLSA_c00700 94702347e9113ee1e2873a9dc76400fb 114 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 6 112 1.5E-11 T 12-10-2018 IPR008769 Poly granule associated CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Gene3D G3DSA:2.120.10.90 515 745 2.9E-42 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 939 968 2.3 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 815 831 4.0 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 566 617 2.5E-4 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 862 902 7.7E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 628 665 0.28 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 773 0.72 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 520 545 0.16 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 SMART SM00434 18 478 2.2E-222 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Gene3D G3DSA:3.30.1360.40 243 346 1.7E-194 T 12-10-2018 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 SUPERFAMILY SSF56719 38 501 1.7E-163 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Gene3D G3DSA:2.120.10.90 746 969 1.4E-37 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Gene3D G3DSA:3.90.199.10 39 500 1.7E-194 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 SUPERFAMILY SSF101904 514 731 2.49E-44 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Gene3D G3DSA:1.10.268.10 383 471 1.7E-194 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 SUPERFAMILY SSF101904 751 960 1.7E-30 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLSA_c39950 deb669a461fdbb4ffdac86e1644195fd 971 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 485 6.5E-141 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c31560 7c56e8c694383113c00a4427629e0d5c 214 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 26 204 36.23 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CLSA_c31560 7c56e8c694383113c00a4427629e0d5c 214 Pfam PF02677 Uncharacterized BCR, COG1636 26 203 5.0E-73 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CLSA_c19690 37ab01fc5b76aa9a6498c8a6f8c13f4a 405 Pfam PF07690 Major Facilitator Superfamily 16 228 4.1E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c19690 37ab01fc5b76aa9a6498c8a6f8c13f4a 405 SUPERFAMILY SSF103473 1 389 5.89E-47 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c19690 37ab01fc5b76aa9a6498c8a6f8c13f4a 405 Gene3D G3DSA:1.20.1250.20 1 391 2.7E-42 T 12-10-2018 CLSA_c19410 8590fdc632ab0a949b17d405c547ec98 471 Pfam PF16472 Domain of unknown function (DUF5050) 186 463 4.2E-50 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 CLSA_c19410 8590fdc632ab0a949b17d405c547ec98 471 SUPERFAMILY SSF63825 295 461 7.85E-11 T 12-10-2018 CLSA_c19410 8590fdc632ab0a949b17d405c547ec98 471 Gene3D G3DSA:2.120.10.30 256 463 7.6E-6 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CLSA_c36130 3949174569d26bee2495450289a28e0d 314 SUPERFAMILY SSF46689 269 313 8.96E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 Gene3D G3DSA:1.10.10.60 216 264 1.4E-11 T 12-10-2018 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 SMART SM00342 232 314 7.1E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 299 2.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 2.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 Pfam PF12833 Helix-turn-helix domain 238 313 3.1E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c36130 3949174569d26bee2495450289a28e0d 314 Gene3D G3DSA:1.10.10.60 265 314 4.8E-16 T 12-10-2018 CLSA_c28900 d132caae8e8d0a39b2e84108d9ce110d 195 SMART SM00014 56 164 7.8E-20 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c28900 d132caae8e8d0a39b2e84108d9ce110d 195 Pfam PF01569 PAP2 superfamily 61 164 2.1E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c28900 d132caae8e8d0a39b2e84108d9ce110d 195 SUPERFAMILY SSF48317 2 163 3.27E-34 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLSA_c28900 d132caae8e8d0a39b2e84108d9ce110d 195 Gene3D G3DSA:1.20.144.10 78 182 1.2E-16 T 12-10-2018 CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 SUPERFAMILY SSF55031 189 293 4.06E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 Gene3D G3DSA:3.40.630.10 15 376 7.0E-134 T 12-10-2018 CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 Gene3D G3DSA:3.30.70.360 184 298 7.0E-134 T 12-10-2018 CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 379 1.5E-111 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 Pfam PF01546 Peptidase family M20/M25/M40 74 386 7.3E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 Pfam PF07687 Peptidase dimerisation domain 189 280 1.2E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 SUPERFAMILY SSF53187 5 392 7.23E-77 T 12-10-2018 CLSA_c31050 31ba0b3c45cf58dd27c32520bc7351bc 393 PIRSF PIRSF005962 1 393 1.5E-129 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 CLSA_c03540 a988115ff42e5a548e90e08dadf55f1d 190 SUPERFAMILY SSF103473 4 179 6.41E-6 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c03540 a988115ff42e5a548e90e08dadf55f1d 190 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 24.18 T 12-10-2018 IPR022929 Putative manganese efflux pump MntP CLSA_c03540 a988115ff42e5a548e90e08dadf55f1d 190 Pfam PF02659 Putative manganese efflux pump 35 181 1.5E-52 T 12-10-2018 IPR003810 Putative manganese efflux pump CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 Gene3D G3DSA:1.25.40.10 92 364 1.5E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 SMART SM00028 285 318 0.049 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 SMART SM00028 251 284 1.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 SMART SM00028 319 351 74.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 Pfam PF00515 Tetratricopeptide repeat 253 281 6.3E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 Pfam PF13424 Tetratricopeptide repeat 289 341 1.4E-7 T 12-10-2018 CLSA_c12300 0bcd0b80b04e253613ee14b42fbe9957 366 SUPERFAMILY SSF48452 221 350 2.28E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 SMART SM00283 280 570 2.0E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 Gene3D G3DSA:1.10.287.950 261 570 6.8E-57 T 12-10-2018 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 520 2.3E-29 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 183 7.4E-36 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 421 450 7.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 419 7.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 7.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c24890 cc9bce461f94bcd1f44f4fc7088f098c 573 SUPERFAMILY SSF58104 233 570 1.22E-59 T 12-10-2018 CLSA_c29760 f18a153f3f1bb41959add7ec624e4958 724 SUPERFAMILY SSF51445 241 466 1.04E-19 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c29760 f18a153f3f1bb41959add7ec624e4958 724 Pfam PF12571 Phage tail-collar fibre protein 1 149 3.1E-57 T 12-10-2018 IPR022225 Phage tail fibre protein CLSA_c29760 f18a153f3f1bb41959add7ec624e4958 724 Gene3D G3DSA:3.20.20.80 178 490 7.5E-59 T 12-10-2018 CLSA_c15230 cc385c33d14d1cb86c196b19dbe3cc93 131 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 128 1.5E-28 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLSA_c15230 cc385c33d14d1cb86c196b19dbe3cc93 131 Gene3D G3DSA:1.20.120.50 2 130 1.7E-32 T 12-10-2018 IPR035938 Hemerythrin-like superfamily CLSA_c15230 cc385c33d14d1cb86c196b19dbe3cc93 131 Pfam PF01814 Hemerythrin HHE cation binding domain 11 126 1.5E-9 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CLSA_c15230 cc385c33d14d1cb86c196b19dbe3cc93 131 SUPERFAMILY SSF47188 2 128 7.72E-29 T 12-10-2018 IPR035938 Hemerythrin-like superfamily CLSA_c39510 8a28e188dfc6fd09b9de8a96d3d765b5 150 Gene3D G3DSA:3.40.630.30 2 148 5.3E-21 T 12-10-2018 CLSA_c39510 8a28e188dfc6fd09b9de8a96d3d765b5 150 SUPERFAMILY SSF55729 3 137 8.58E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c39510 8a28e188dfc6fd09b9de8a96d3d765b5 150 Pfam PF13302 Acetyltransferase (GNAT) domain 3 133 1.1E-7 T 12-10-2018 IPR000182 GNAT domain CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF12733 Cadherin-like beta sandwich domain 297 373 1.5E-14 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF12733 Cadherin-like beta sandwich domain 58 148 1.6E-19 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF12733 Cadherin-like beta sandwich domain 166 256 1.6E-20 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF01473 Putative cell wall binding repeat 437 455 0.012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF01473 Putative cell wall binding repeat 416 435 0.0089 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF01473 Putative cell wall binding repeat 457 475 3.8E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Pfam PF01473 Putative cell wall binding repeat 477 495 8.4E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 Gene3D G3DSA:2.10.270.10 331 513 6.3E-37 T 12-10-2018 CLSA_c10580 522513ff7f70a4ebc5599a7cf4734a92 514 SUPERFAMILY SSF69360 318 513 4.45E-38 T 12-10-2018 CLSA_c27690 64348713ee8416428c84b13f55d87df7 300 PIRSF PIRSF028757 1 300 1.8E-73 T 12-10-2018 IPR003507 Peptidase family S66 CLSA_c27690 64348713ee8416428c84b13f55d87df7 300 Pfam PF02016 LD-carboxypeptidase 10 298 1.2E-67 T 12-10-2018 IPR003507 Peptidase family S66 CLSA_c27690 64348713ee8416428c84b13f55d87df7 300 Gene3D G3DSA:3.40.50.10740 2 154 5.1E-41 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CLSA_c27690 64348713ee8416428c84b13f55d87df7 300 Gene3D G3DSA:3.50.30.60 155 300 4.4E-35 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLSA_c27690 64348713ee8416428c84b13f55d87df7 300 SUPERFAMILY SSF141986 163 298 8.5E-36 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLSA_c27690 64348713ee8416428c84b13f55d87df7 300 SUPERFAMILY SSF52317 2 152 3.11E-36 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c14940 ec585151bcebbb013b1435a9e3c61e87 253 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 12-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLSA_c14940 ec585151bcebbb013b1435a9e3c61e87 253 SUPERFAMILY SSF51569 1 250 6.59E-83 T 12-10-2018 CLSA_c14940 ec585151bcebbb013b1435a9e3c61e87 253 Gene3D G3DSA:3.20.20.70 1 253 1.0E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c14940 ec585151bcebbb013b1435a9e3c61e87 253 Pfam PF01487 Type I 3-dehydroquinase 19 245 1.1E-72 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLSA_c14940 ec585151bcebbb013b1435a9e3c61e87 253 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 39.469 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLSA_c14940 ec585151bcebbb013b1435a9e3c61e87 253 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 244 1.0E-77 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLSA_c07450 f2193ecce836a70cbe6ef16bde006a72 257 SUPERFAMILY SSF53850 1 255 2.09E-65 T 12-10-2018 CLSA_c07450 f2193ecce836a70cbe6ef16bde006a72 257 Gene3D G3DSA:3.40.190.10 41 250 5.7E-70 T 12-10-2018 CLSA_c07450 f2193ecce836a70cbe6ef16bde006a72 257 Gene3D G3DSA:3.40.190.10 119 216 5.7E-70 T 12-10-2018 CLSA_c07450 f2193ecce836a70cbe6ef16bde006a72 257 SMART SM00062 35 257 6.9E-54 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c07450 f2193ecce836a70cbe6ef16bde006a72 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 255 3.6E-58 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c07450 f2193ecce836a70cbe6ef16bde006a72 257 SMART SM00079 35 257 1.8E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CLSA_c12250 ef885f0df73f73393be3851f828bbfd7 407 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 291 380 4.7E-10 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CLSA_c12250 ef885f0df73f73393be3851f828bbfd7 407 Pfam PF00149 Calcineurin-like phosphoesterase 1 240 4.1E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c12250 ef885f0df73f73393be3851f828bbfd7 407 Gene3D G3DSA:3.60.21.10 1 290 5.4E-68 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c12250 ef885f0df73f73393be3851f828bbfd7 407 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 267 1.4E-56 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CLSA_c12250 ef885f0df73f73393be3851f828bbfd7 407 SUPERFAMILY SSF56300 1 347 1.58E-51 T 12-10-2018 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 Gene3D G3DSA:3.10.560.10 95 182 2.1E-11 T 12-10-2018 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 Pfam PF10531 SLBB domain 109 162 1.4E-11 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 SUPERFAMILY SSF47781 182 251 7.67E-29 T 12-10-2018 IPR010994 RuvA domain 2-like CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 SMART SM00278 231 250 9.4 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 SMART SM00278 201 220 0.36 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 Pfam PF12836 Helix-hairpin-helix motif 189 251 7.3E-24 T 12-10-2018 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 Gene3D G3DSA:1.10.150.280 183 252 2.2E-23 T 12-10-2018 CLSA_c06500 7c0a3c74c9ab20366b442e0576ba71c4 253 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 192 252 4.0E-23 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 SUPERFAMILY SSF47979 64 123 2.35E-16 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 SMART SM00529 25 123 6.5E-22 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 64 122 1.6E-14 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 SUPERFAMILY SSF46785 4 63 2.98E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 Gene3D G3DSA:1.10.60.10 69 123 1.4E-21 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 5 55 4.1E-10 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 CLSA_c17050 be139f548a6bcb32f74b636e35898725 127 Gene3D G3DSA:1.10.10.10 4 68 7.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09200 67c59a6f1fc03373c05fc4d148c812df 288 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 15 281 2.5E-53 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA CLSA_c09200 67c59a6f1fc03373c05fc4d148c812df 288 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 240 2.0E-73 T 12-10-2018 CLSA_c36800 3a683bc4cc31c68e25d3724f086b4271 154 Pfam PF13673 Acetyltransferase (GNAT) domain 23 151 1.2E-12 T 12-10-2018 IPR000182 GNAT domain CLSA_c36800 3a683bc4cc31c68e25d3724f086b4271 154 SUPERFAMILY SSF55729 37 152 6.62E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c36800 3a683bc4cc31c68e25d3724f086b4271 154 Gene3D G3DSA:3.40.630.30 7 154 1.1E-21 T 12-10-2018 CLSA_c20220 74cd97c089bfa4b103ef8a279bb626d9 323 Pfam PF02517 CAAX protease self-immunity 157 239 4.1E-18 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 Gene3D G3DSA:1.10.150.400 354 438 1.3E-14 T 12-10-2018 CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 Gene3D G3DSA:3.40.50.1000 344 545 1.3E-14 T 12-10-2018 IPR023214 HAD superfamily CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 SUPERFAMILY SSF53448 5 229 1.65E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 456 537 6.1E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 SUPERFAMILY SSF56784 340 544 1.04E-11 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 Gene3D G3DSA:3.90.550.10 4 213 1.1E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42010 7c9930f50176fc43db30ce16d0df4fec 1035 Pfam PF00535 Glycosyl transferase family 2 7 146 5.6E-37 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 436 446 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 224 453 2.4E-20 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 SUPERFAMILY SSF53335 67 453 3.89E-84 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 SUPERFAMILY SSF50249 3 59 6.85E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 384 415 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 446 2.0E-147 T 12-10-2018 CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 Gene3D G3DSA:2.40.50.140 2 78 4.1E-22 T 12-10-2018 CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 Pfam PF01938 TRAM domain 6 58 9.6E-12 T 12-10-2018 IPR002792 TRAM domain CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 Gene3D G3DSA:3.40.50.150 80 448 6.6E-119 T 12-10-2018 CLSA_c42890 95396070fd5a9ada695e1bdb4d9e6ec1 454 Gene3D G3DSA:3.40.1350.30 127 285 6.6E-119 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 SUPERFAMILY SSF52317 1 191 8.99E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 Pfam PF00117 Glutamine amidotransferase class-I 4 187 4.2E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 185 2.2E-67 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 Gene3D G3DSA:3.40.50.880 1 188 2.4E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.5E-5 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.5E-5 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.6E-13 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.6E-13 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.6E-13 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.0E-34 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.0E-34 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.0E-34 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00097 Anthranilate synthase component II signature 164 177 8.0E-34 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.0E-34 T 12-10-2018 CLSA_c11300 46926ff24bc88788892b021cc279aac4 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.0E-34 T 12-10-2018 CLSA_c04410 ba3645230b54a964206da768a1599546 298 Gene3D G3DSA:2.10.270.10 187 279 4.6E-15 T 12-10-2018 CLSA_c04410 ba3645230b54a964206da768a1599546 298 SMART SM00646 63 174 1.7E-14 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c04410 ba3645230b54a964206da768a1599546 298 SUPERFAMILY SSF53187 4 175 5.65E-31 T 12-10-2018 CLSA_c04410 ba3645230b54a964206da768a1599546 298 Gene3D G3DSA:3.40.630.40 1 177 4.4E-39 T 12-10-2018 CLSA_c04410 ba3645230b54a964206da768a1599546 298 SUPERFAMILY SSF69360 180 297 4.58E-21 T 12-10-2018 CLSA_c04410 ba3645230b54a964206da768a1599546 298 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 6 158 5.1E-24 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 Gene3D G3DSA:2.60.40.2700 74 169 3.8E-13 T 12-10-2018 CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 Pfam PF01473 Putative cell wall binding repeat 391 408 0.0014 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 Pfam PF01473 Putative cell wall binding repeat 430 448 5.4E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 Pfam PF01473 Putative cell wall binding repeat 450 468 1.8E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 Pfam PF01473 Putative cell wall binding repeat 411 428 6.5E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 SUPERFAMILY SSF69360 301 488 2.45E-41 T 12-10-2018 CLSA_c41940 76fe458c8d669f1b01b0249a788cb8d4 489 Gene3D G3DSA:2.10.270.10 337 489 4.2E-39 T 12-10-2018 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 Gene3D G3DSA:1.10.287.130 171 293 1.2E-15 T 12-10-2018 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 296 2.9E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 451 1.9E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 SMART SM00388 233 298 2.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 PRINTS PR01780 Lantibiotic regulatory protein signature 404 419 6.7E-8 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 PRINTS PR01780 Lantibiotic regulatory protein signature 339 354 6.7E-8 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 PRINTS PR01780 Lantibiotic regulatory protein signature 242 258 6.7E-8 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 Gene3D G3DSA:3.30.565.10 299 453 2.9E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 SUPERFAMILY SSF55874 306 443 2.62E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 SUPERFAMILY SSF47384 218 296 4.71E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c24470 ad0bcb4456eada822e28f3aee16ba751 453 SMART SM00387 343 453 3.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c40860 95d37d352ad16b31b24597bfc330321d 199 Gene3D G3DSA:1.10.443.10 3 198 7.6E-40 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c40860 95d37d352ad16b31b24597bfc330321d 199 Pfam PF00589 Phage integrase family 10 179 1.2E-33 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c40860 95d37d352ad16b31b24597bfc330321d 199 SUPERFAMILY SSF56349 7 193 4.12E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c05070 25dcab685c6d14749f707c3e06da9341 383 SUPERFAMILY SSF53756 3 378 8.97E-140 T 12-10-2018 CLSA_c05070 25dcab685c6d14749f707c3e06da9341 383 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 369 6.7E-160 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CLSA_c05070 25dcab685c6d14749f707c3e06da9341 383 Gene3D G3DSA:3.40.50.2000 6 364 3.0E-149 T 12-10-2018 CLSA_c05070 25dcab685c6d14749f707c3e06da9341 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 366 1.3E-123 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c05070 25dcab685c6d14749f707c3e06da9341 383 Gene3D G3DSA:3.40.50.2000 192 353 3.0E-149 T 12-10-2018 CLSA_c29350 126df19ec035587b8e755cbe73f3f5a0 468 Gene3D G3DSA:3.40.50.300 16 242 1.4E-10 T 12-10-2018 CLSA_c29350 126df19ec035587b8e755cbe73f3f5a0 468 Pfam PF07693 KAP family P-loop domain 38 324 1.1E-31 T 12-10-2018 IPR011646 KAP family P-loop domain CLSA_c29350 126df19ec035587b8e755cbe73f3f5a0 468 SUPERFAMILY SSF52540 17 271 1.71E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44090 94693f1f66878442f61ce6ca870b38d7 136 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 33 132 1.8E-26 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLSA_c44090 94693f1f66878442f61ce6ca870b38d7 136 Gene3D G3DSA:3.30.1310.10 32 136 1.5E-38 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CLSA_c44090 94693f1f66878442f61ce6ca870b38d7 136 Pfam PF02575 YbaB/EbfC DNA-binding family 42 131 3.0E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLSA_c44090 94693f1f66878442f61ce6ca870b38d7 136 SUPERFAMILY SSF82607 38 130 1.15E-30 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CLSA_c44090 94693f1f66878442f61ce6ca870b38d7 136 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 36 130 23.035 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLSA_c44090 94693f1f66878442f61ce6ca870b38d7 136 PIRSF PIRSF004555 34 136 4.8E-37 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLSA_c18060 40639c2af87a244e48132a5cb609d4bb 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 85 3.8E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c18060 40639c2af87a244e48132a5cb609d4bb 94 SUPERFAMILY SSF52794 4 92 7.59E-17 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c18060 40639c2af87a244e48132a5cb609d4bb 94 Gene3D G3DSA:3.40.50.2300 4 94 4.6E-26 T 12-10-2018 CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 Pfam PF00664 ABC transporter transmembrane region 30 290 5.0E-33 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 Gene3D G3DSA:1.20.1560.10 1 324 1.1E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 SUPERFAMILY SSF52540 345 559 6.48E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 Pfam PF00005 ABC transporter 367 512 3.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 SUPERFAMILY SSF90123 11 319 1.44E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 SMART SM00382 376 556 7.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c28370 9781cba36f0537962c7ea51bb67e7b11 566 Gene3D G3DSA:3.40.50.300 342 565 1.7E-69 T 12-10-2018 CLSA_c38160 b01db470008611604c025f5b284dbbe6 255 SUPERFAMILY SSF88713 43 242 1.66E-52 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c38160 b01db470008611604c025f5b284dbbe6 255 Gene3D G3DSA:3.20.20.370 19 246 1.6E-62 T 12-10-2018 CLSA_c38160 b01db470008611604c025f5b284dbbe6 255 Pfam PF01522 Polysaccharide deacetylase 47 164 9.5E-28 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c06180 07205598c3be1fb9dc6d2732f11cbbe7 265 PIRSF PIRSF003092 1 265 3.2E-87 T 12-10-2018 IPR025501 ATP binding protein MinD CLSA_c06180 07205598c3be1fb9dc6d2732f11cbbe7 265 SUPERFAMILY SSF52540 1 262 1.07E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06180 07205598c3be1fb9dc6d2732f11cbbe7 265 Pfam PF13614 AAA domain 5 157 3.8E-23 T 12-10-2018 IPR025669 AAA domain CLSA_c06180 07205598c3be1fb9dc6d2732f11cbbe7 265 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 5 262 8.3E-124 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CLSA_c06180 07205598c3be1fb9dc6d2732f11cbbe7 265 Gene3D G3DSA:3.40.50.300 1 254 6.6E-67 T 12-10-2018 CLSA_c40710 12c8a5084504e9a155830b1e3d4a2656 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 252 4.0E-87 T 12-10-2018 IPR005226 UPF0014 family CLSA_c40710 12c8a5084504e9a155830b1e3d4a2656 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 10 257 3.9E-59 T 12-10-2018 IPR005226 UPF0014 family CLSA_c03460 93099d37d79ab5c787a19eea91cc787d 280 Gene3D G3DSA:3.40.1090.20 1 78 2.9E-5 T 12-10-2018 CLSA_c03460 93099d37d79ab5c787a19eea91cc787d 280 SUPERFAMILY SSF52151 2 271 2.25E-46 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLSA_c03460 93099d37d79ab5c787a19eea91cc787d 280 Gene3D G3DSA:3.40.1090.10 79 227 4.0E-15 T 12-10-2018 CLSA_c03460 93099d37d79ab5c787a19eea91cc787d 280 Pfam PF01734 Patatin-like phospholipase 4 167 1.9E-16 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 6.2E-26 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 SUPERFAMILY SSF56784 5 263 1.6E-59 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.8E-51 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 7.1E-58 T 12-10-2018 CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 Gene3D G3DSA:3.40.50.1000 5 255 5.5E-61 T 12-10-2018 IPR023214 HAD superfamily CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 12-10-2018 CLSA_c23880 1cf7ece59369ecd0f00d3a9965b0df38 264 Gene3D G3DSA:3.30.1240.10 82 187 5.5E-61 T 12-10-2018 CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 Gene3D G3DSA:3.90.1150.10 2 369 1.4E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 PIRSF PIRSF005572 1 379 4.3E-66 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 375 6.4E-153 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 Gene3D G3DSA:3.40.640.10 16 266 1.4E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 210 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 SUPERFAMILY SSF53383 1 376 1.13E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c41810 c65a749f4661ccacc52a88da35919ae1 379 Pfam PF00266 Aminotransferase class-V 2 368 5.2E-95 T 12-10-2018 IPR000192 Aminotransferase class V domain CLSA_c33630 82ee61f37494d811af297b036c2e595a 217 Gene3D G3DSA:3.40.1080.10 1 217 1.7E-78 T 12-10-2018 CLSA_c33630 82ee61f37494d811af297b036c2e595a 217 SUPERFAMILY SSF100950 2 214 2.93E-76 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c33630 82ee61f37494d811af297b036c2e595a 217 SMART SM00882 4 215 3.2E-68 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c33630 82ee61f37494d811af297b036c2e595a 217 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 16 31 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CLSA_c33630 82ee61f37494d811af297b036c2e595a 217 Pfam PF01144 Coenzyme A transferase 13 214 1.7E-67 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c33630 82ee61f37494d811af297b036c2e595a 217 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 7 214 3.0E-63 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CLSA_c24930 df72f93c9e08aa8204060d67bc906a0f 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 8 95 12.775 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CLSA_c24930 df72f93c9e08aa8204060d67bc906a0f 96 Pfam PF09827 CRISPR associated protein Cas2 9 76 2.2E-18 T 12-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CLSA_c24930 df72f93c9e08aa8204060d67bc906a0f 96 Gene3D G3DSA:3.30.70.240 8 73 7.4E-23 T 12-10-2018 CLSA_c24930 df72f93c9e08aa8204060d67bc906a0f 96 SUPERFAMILY SSF143430 9 86 2.22E-23 T 12-10-2018 CLSA_c24930 df72f93c9e08aa8204060d67bc906a0f 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 9 88 2.2E-10 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CLSA_c31350 d866d640ecc3c86ce7a8489dcb8830a2 209 Pfam PF01634 ATP phosphoribosyltransferase 52 204 7.2E-51 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CLSA_c31350 d866d640ecc3c86ce7a8489dcb8830a2 209 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 184 4.0E-59 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CLSA_c31350 d866d640ecc3c86ce7a8489dcb8830a2 209 Gene3D G3DSA:3.40.190.10 5 198 4.9E-73 T 12-10-2018 CLSA_c31350 d866d640ecc3c86ce7a8489dcb8830a2 209 SUPERFAMILY SSF53850 3 208 1.86E-62 T 12-10-2018 CLSA_c31350 d866d640ecc3c86ce7a8489dcb8830a2 209 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 2 208 53.178 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CLSA_c31350 d866d640ecc3c86ce7a8489dcb8830a2 209 Gene3D G3DSA:3.40.190.10 93 176 4.9E-73 T 12-10-2018 CLSA_c38800 890a5d1bddfa3d0edf4822b2557196b9 414 Pfam PF05193 Peptidase M16 inactive domain 163 329 1.4E-20 T 12-10-2018 IPR007863 Peptidase M16, C-terminal CLSA_c38800 890a5d1bddfa3d0edf4822b2557196b9 414 Pfam PF00675 Insulinase (Peptidase family M16) 15 156 4.9E-22 T 12-10-2018 IPR011765 Peptidase M16, N-terminal CLSA_c38800 890a5d1bddfa3d0edf4822b2557196b9 414 SUPERFAMILY SSF63411 2 202 1.27E-44 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c38800 890a5d1bddfa3d0edf4822b2557196b9 414 Gene3D G3DSA:3.30.830.10 229 411 1.6E-16 T 12-10-2018 CLSA_c38800 890a5d1bddfa3d0edf4822b2557196b9 414 SUPERFAMILY SSF63411 257 404 4.02E-14 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c38800 890a5d1bddfa3d0edf4822b2557196b9 414 Gene3D G3DSA:3.30.830.10 4 212 5.8E-47 T 12-10-2018 CLSA_c19060 a62b284ada28ca3b6d78710094e4013a 510 Pfam PF02652 L-lactate permease 4 507 5.2E-127 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLSA_c19060 a62b284ada28ca3b6d78710094e4013a 510 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 507 3.8E-124 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLSA_c12570 57094267842bbb5ea398c22d69fc16dc 206 Pfam PF00929 Exonuclease 4 126 3.2E-10 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c12570 57094267842bbb5ea398c22d69fc16dc 206 Gene3D G3DSA:3.30.420.10 1 187 5.2E-25 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c12570 57094267842bbb5ea398c22d69fc16dc 206 SMART SM00479 2 189 5.7E-5 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c12570 57094267842bbb5ea398c22d69fc16dc 206 SUPERFAMILY SSF53098 1 189 3.17E-25 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c30660 734c1600dcc2443545c1a02c2b9e59e0 67 Gene3D G3DSA:1.10.287.540 8 63 2.6E-12 T 12-10-2018 CLSA_c30660 734c1600dcc2443545c1a02c2b9e59e0 67 Pfam PF05979 Bacterial protein of unknown function (DUF896) 10 57 4.8E-14 T 12-10-2018 IPR009242 Protein of unknown function DUF896 CLSA_c30660 734c1600dcc2443545c1a02c2b9e59e0 67 SUPERFAMILY SSF158221 6 47 9.55E-10 T 12-10-2018 CLSA_c41950 9d5106653f5a9df45074313131c00383 591 SUPERFAMILY SSF69360 387 590 1.16E-38 T 12-10-2018 CLSA_c41950 9d5106653f5a9df45074313131c00383 591 Gene3D G3DSA:2.10.270.10 416 590 5.0E-40 T 12-10-2018 CLSA_c41950 9d5106653f5a9df45074313131c00383 591 Pfam PF01473 Putative cell wall binding repeat 533 551 1.7E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41950 9d5106653f5a9df45074313131c00383 591 Pfam PF01473 Putative cell wall binding repeat 513 531 1.6E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41950 9d5106653f5a9df45074313131c00383 591 Pfam PF01473 Putative cell wall binding repeat 553 572 1.1E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41950 9d5106653f5a9df45074313131c00383 591 Pfam PF01473 Putative cell wall binding repeat 493 511 9.7E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c28490 1105e4a7b770901fc62b441f799aae5e 198 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 180 3.9E-76 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLSA_c28490 1105e4a7b770901fc62b441f799aae5e 198 Gene3D G3DSA:2.60.120.10 1 184 8.6E-77 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c28490 1105e4a7b770901fc62b441f799aae5e 198 SUPERFAMILY SSF51182 4 182 1.78E-73 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c28490 1105e4a7b770901fc62b441f799aae5e 198 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 180 7.0E-71 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLSA_c28490 1105e4a7b770901fc62b441f799aae5e 198 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 181 2.3E-81 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLSA_c22050 f4245586366d5811323b3712e87cb167 120 Gene3D G3DSA:3.40.50.2300 1 120 1.5E-29 T 12-10-2018 CLSA_c22050 f4245586366d5811323b3712e87cb167 120 SUPERFAMILY SSF52172 1 119 5.98E-30 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c22050 f4245586366d5811323b3712e87cb167 120 Pfam PF00072 Response regulator receiver domain 4 116 2.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c22050 f4245586366d5811323b3712e87cb167 120 SMART SM00448 2 116 1.7E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 Pfam PF04397 LytTr DNA-binding domain 147 224 1.2E-8 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 Gene3D G3DSA:3.40.50.2300 2 131 2.6E-21 T 12-10-2018 CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 SUPERFAMILY SSF52172 3 122 1.24E-19 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 SMART SM00448 2 116 2.3E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 SMART SM00850 142 241 1.3E-12 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 Gene3D G3DSA:2.40.50.1020 132 234 1.5E-7 T 12-10-2018 CLSA_c05760 d8a61f62bf271b162d4a01b763fbb032 248 Pfam PF00072 Response regulator receiver domain 4 115 8.2E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 Gene3D G3DSA:1.10.10.10 6 87 1.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 3.4E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 SUPERFAMILY SSF46785 12 81 2.14E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.0E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.0E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 SMART SM00345 18 77 2.9E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c24350 9d7764373dc73fb6d2f797b1da1f7e79 244 SUPERFAMILY SSF64288 65 184 1.0E-4 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLSA_c21500 01195f5d96869aad3f75bd3b644064c8 429 Pfam PF09861 Domain of unknown function (DUF2088) 8 205 1.1E-76 T 12-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 CLSA_c21500 01195f5d96869aad3f75bd3b644064c8 429 Gene3D G3DSA:3.90.226.30 6 421 5.3E-133 T 12-10-2018 CLSA_c21500 01195f5d96869aad3f75bd3b644064c8 429 Gene3D G3DSA:3.40.50.11440 32 275 5.3E-133 T 12-10-2018 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 SUPERFAMILY SSF55031 208 318 3.14E-31 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 Gene3D G3DSA:3.30.70.360 208 318 1.4E-166 T 12-10-2018 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 Pfam PF01546 Peptidase family M20/M25/M40 139 401 5.3E-12 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 SUPERFAMILY SSF53187 3 404 2.14E-75 T 12-10-2018 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 Pfam PF07687 Peptidase dimerisation domain 205 308 3.9E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 PIRSF PIRSF037215 1 405 2.0E-166 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 Gene3D G3DSA:3.40.630.10 4 399 1.4E-166 T 12-10-2018 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLSA_c23840 006b581d57bb6559e890d9d7a5928c4d 405 TIGRFAM TIGR01882 peptidase-T: peptidase T 4 403 1.2E-150 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 Gene3D G3DSA:2.60.410.10 283 366 7.0E-6 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 Gene3D G3DSA:3.40.710.10 19 282 7.2E-83 T 12-10-2018 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 SUPERFAMILY SSF56601 1 279 1.84E-70 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 253 7.2E-48 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 1.4E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 1.4E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 1.4E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 364 1.1E-7 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c06490 0970c8c29a7dcb098d8defe3d4f696a0 411 SMART SM00936 279 369 0.0025 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 Gene3D G3DSA:2.30.40.10 3 396 9.1E-141 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 397 5.2E-102 T 12-10-2018 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 Gene3D G3DSA:3.20.20.140 53 341 9.1E-141 T 12-10-2018 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 ProSitePatterns PS00483 Dihydroorotase signature 2. 281 292 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 SUPERFAMILY SSF51556 54 342 4.41E-86 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 Pfam PF01979 Amidohydrolase family 49 394 1.9E-29 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 SUPERFAMILY SSF51338 1 397 9.54E-28 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CLSA_c12470 1dd6b5a85e04ba02970d56ccc513fa71 398 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 398 38.331 T 12-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CLSA_c09710 a57ea13bd7a3ec37766102d31e374c31 87 Pfam PF03412 Peptidase C39 family 9 53 1.5E-8 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CLSA_c09710 a57ea13bd7a3ec37766102d31e374c31 87 Gene3D G3DSA:3.90.70.10 2 63 1.5E-13 T 12-10-2018 CLSA_c43140 712a3430cba1f6f6b3a4a9cab97a7b94 85 Gene3D G3DSA:1.10.1220.10 3 84 3.1E-7 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CLSA_c43770 c51526622af078addc9326ede4913e86 368 SUPERFAMILY SSF53448 16 316 8.44E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c43770 c51526622af078addc9326ede4913e86 368 SUPERFAMILY SSF51161 288 357 2.63E-13 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c43770 c51526622af078addc9326ede4913e86 368 Gene3D G3DSA:3.90.550.10 1 262 4.7E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c43770 c51526622af078addc9326ede4913e86 368 Gene3D G3DSA:2.160.10.10 263 365 4.1E-25 T 12-10-2018 CLSA_c43770 c51526622af078addc9326ede4913e86 368 Pfam PF00483 Nucleotidyl transferase 27 205 7.9E-11 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c43770 c51526622af078addc9326ede4913e86 368 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 3 366 2.8E-134 T 12-10-2018 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 CLSA_c02150 33f09ed04b86e7ce9be96cdb420cb447 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.959 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z CLSA_c02150 33f09ed04b86e7ce9be96cdb420cb447 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 3.3E-25 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02150 33f09ed04b86e7ce9be96cdb420cb447 61 Gene3D G3DSA:4.10.830.10 1 61 5.8E-28 T 12-10-2018 CLSA_c02150 33f09ed04b86e7ce9be96cdb420cb447 61 SUPERFAMILY SSF57716 8 61 2.92E-19 T 12-10-2018 CLSA_c20360 2c184824c7854c705b3cd1d49f7df988 343 SUPERFAMILY SSF54862 183 246 3.98E-6 T 12-10-2018 CLSA_c20360 2c184824c7854c705b3cd1d49f7df988 343 Pfam PF13484 4Fe-4S double cluster binding domain 183 246 2.2E-10 T 12-10-2018 CLSA_c40530 4398720ee82c7380b779b0c60a0b6192 234 SMART SM00563 51 165 1.2E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CLSA_c40530 4398720ee82c7380b779b0c60a0b6192 234 SUPERFAMILY SSF69593 24 234 2.22E-46 T 12-10-2018 CLSA_c40530 4398720ee82c7380b779b0c60a0b6192 234 Pfam PF01553 Acyltransferase 36 163 4.0E-22 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CLSA_c07770 6954b34b3766193f94ac289bd8e28e53 400 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 137 1.5E-37 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CLSA_c07770 6954b34b3766193f94ac289bd8e28e53 400 Gene3D G3DSA:3.40.50.720 5 390 3.6E-166 T 12-10-2018 CLSA_c07770 6954b34b3766193f94ac289bd8e28e53 400 SUPERFAMILY SSF51735 3 190 7.93E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c07770 6954b34b3766193f94ac289bd8e28e53 400 Gene3D G3DSA:3.30.360.10 151 347 3.6E-166 T 12-10-2018 CLSA_c07770 6954b34b3766193f94ac289bd8e28e53 400 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 387 1.7E-39 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Gene3D G3DSA:2.10.270.10 540 602 2.2E-17 T 12-10-2018 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 SUPERFAMILY SSF69360 458 541 1.06E-17 T 12-10-2018 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Gene3D G3DSA:2.10.270.10 418 539 4.1E-21 T 12-10-2018 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 SUPERFAMILY SSF69360 517 704 4.58E-51 T 12-10-2018 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Gene3D G3DSA:2.10.270.10 603 660 2.9E-13 T 12-10-2018 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Gene3D G3DSA:2.10.270.10 661 705 1.2E-11 T 12-10-2018 CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 624 642 0.12 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 521 538 6.6E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 584 600 0.002 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 666 684 1.2E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 603 621 0.38 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 544 560 0.016 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41890 c62e1d4e5916c3c48d5f9f931a2bd276 705 Pfam PF01473 Putative cell wall binding repeat 564 580 1.1E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24900 dddc17c2ce9d6cf08ff4e13f019c083e 171 Pfam PF08020 Protein of unknown function (DUF1706) 1 167 7.3E-57 T 12-10-2018 IPR012550 Protein of unknown function DUF1706 CLSA_c24900 dddc17c2ce9d6cf08ff4e13f019c083e 171 Gene3D G3DSA:1.20.120.450 1 169 2.2E-68 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CLSA_c24900 dddc17c2ce9d6cf08ff4e13f019c083e 171 PIRSF PIRSF031551 1 171 4.1E-54 T 12-10-2018 IPR012550 Protein of unknown function DUF1706 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 Gene3D G3DSA:3.30.420.40 15 358 1.4E-39 T 12-10-2018 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 Gene3D G3DSA:3.30.1490.110 88 179 1.4E-39 T 12-10-2018 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 Gene3D G3DSA:3.30.420.40 207 353 1.4E-39 T 12-10-2018 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 Pfam PF14450 Cell division protein FtsA 217 345 5.9E-11 T 12-10-2018 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 SMART SM00842 12 206 3.3E-52 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 SUPERFAMILY SSF53067 214 383 1.37E-26 T 12-10-2018 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 SUPERFAMILY SSF53067 11 206 6.04E-24 T 12-10-2018 CLSA_c31060 16563fd0ada677ec2376b7ae6b4eb157 698 Gene3D G3DSA:3.90.640.10 245 301 1.4E-39 T 12-10-2018 CLSA_c08900 2529ee380178bd8afa1925f3ecc9239e 834 Pfam PF01926 50S ribosome-binding GTPase 282 390 2.8E-12 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c08900 2529ee380178bd8afa1925f3ecc9239e 834 SUPERFAMILY SSF52540 264 455 1.76E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c08900 2529ee380178bd8afa1925f3ecc9239e 834 Gene3D G3DSA:3.40.50.300 229 494 1.1E-20 T 12-10-2018 CLSA_c22780 c854fff330e9995f936bbbc4e0945bba 108 Pfam PF00581 Rhodanese-like domain 9 83 2.2E-17 T 12-10-2018 IPR001763 Rhodanese-like domain CLSA_c22780 c854fff330e9995f936bbbc4e0945bba 108 SUPERFAMILY SSF52821 8 85 1.96E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily CLSA_c22780 c854fff330e9995f936bbbc4e0945bba 108 Gene3D G3DSA:3.40.250.10 5 106 4.6E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily CLSA_c22780 c854fff330e9995f936bbbc4e0945bba 108 SMART SM00450 1 91 8.0E-20 T 12-10-2018 IPR001763 Rhodanese-like domain CLSA_c41040 ea48fe85d075c221910fa3be39a25120 244 Pfam PF12784 PD-(D/E)XK nuclease family transposase 3 197 3.5E-50 T 12-10-2018 CLSA_c41040 ea48fe85d075c221910fa3be39a25120 244 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 4 240 1.5E-52 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 SUPERFAMILY SSF58014 60 153 8.5E-25 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 Gene3D G3DSA:2.30.22.10 153 208 4.6E-18 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 Hamap MF_01151 Protein GrpE [grpE]. 25 208 19.11 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 Pfam PF01025 GrpE 49 207 5.3E-45 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 ProSitePatterns PS01071 grpE protein signature. 163 206 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 Gene3D G3DSA:3.90.20.20 37 151 1.2E-27 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 SUPERFAMILY SSF51064 156 207 1.18E-14 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 PRINTS PR00773 GrpE protein signature 110 125 4.4E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 PRINTS PR00773 GrpE protein signature 187 206 4.4E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 PRINTS PR00773 GrpE protein signature 160 175 4.4E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c10840 dd3d312338444b4b4f2faa20850c1404 208 PRINTS PR00773 GrpE protein signature 82 98 4.4E-26 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLSA_c37870 9c0c53a0c2686d39c09c4aecf4e0db21 487 Gene3D G3DSA:3.40.605.10 16 478 1.0E-156 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CLSA_c37870 9c0c53a0c2686d39c09c4aecf4e0db21 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CLSA_c37870 9c0c53a0c2686d39c09c4aecf4e0db21 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CLSA_c37870 9c0c53a0c2686d39c09c4aecf4e0db21 487 SUPERFAMILY SSF53720 11 483 6.81E-150 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CLSA_c37870 9c0c53a0c2686d39c09c4aecf4e0db21 487 Gene3D G3DSA:3.40.309.10 263 449 1.0E-156 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CLSA_c37870 9c0c53a0c2686d39c09c4aecf4e0db21 487 Pfam PF00171 Aldehyde dehydrogenase family 20 479 6.6E-161 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CLSA_c19380 c6c3e6d4a4636b1a2aa66a509e7454c6 189 Pfam PF14278 Transcriptional regulator C-terminal region 91 162 2.5E-14 T 12-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type CLSA_c19380 c6c3e6d4a4636b1a2aa66a509e7454c6 189 Gene3D G3DSA:1.10.357.10 3 188 8.0E-40 T 12-10-2018 CLSA_c19380 c6c3e6d4a4636b1a2aa66a509e7454c6 189 SUPERFAMILY SSF46689 5 73 2.57E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c13870 d7e5c55d6150d537bbe45435f825e72a 168 Pfam PF02620 Uncharacterized ACR, COG1399 55 162 9.7E-28 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CLSA_c04210 712ea800e5b8f7b86da8b6e740ecfbd5 74 Pfam PF07872 Protein of unknown function (DUF1659) 9 51 9.2E-19 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 CLSA_c23930 1206b068eea4b3c110983f83f10d9404 59 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 58 5.7E-21 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLSA_c23930 1206b068eea4b3c110983f83f10d9404 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 8.0E-15 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLSA_c23930 1206b068eea4b3c110983f83f10d9404 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 4.4E-25 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLSA_c23930 1206b068eea4b3c110983f83f10d9404 59 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 17.682 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 PIRSF PIRSF006092 1 160 2.1E-50 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 31.131 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 Gene3D G3DSA:3.10.50.30 84 154 1.4E-25 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 SUPERFAMILY SSF46557 6 81 5.1E-26 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 SUPERFAMILY SSF54534 84 158 8.21E-21 T 12-10-2018 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 Gene3D G3DSA:1.10.287.180 4 78 2.7E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 6.8E-56 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 6.4E-29 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 2.7E-25 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLSA_c01420 b03ff1a2de9fa772c76576b47e446b7f 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CLSA_c32480 eef75ec3e5a84d809ee81b3f06ea26df 383 SUPERFAMILY SSF111342 2 300 7.06E-82 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CLSA_c32480 eef75ec3e5a84d809ee81b3f06ea26df 383 Pfam PF01888 CbiD 13 284 3.0E-92 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CLSA_c32480 eef75ec3e5a84d809ee81b3f06ea26df 383 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 21 364 2.2E-69 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CLSA_c32480 eef75ec3e5a84d809ee81b3f06ea26df 383 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 13 376 26.87 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CLSA_c32480 eef75ec3e5a84d809ee81b3f06ea26df 383 Gene3D G3DSA:3.30.2110.10 15 201 6.2E-48 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CLSA_c32480 eef75ec3e5a84d809ee81b3f06ea26df 383 PIRSF PIRSF026782 9 379 3.1E-110 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 CLSA_c20030 18dd24bbec44313f50c73a2d555b63bd 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 416 8.9E-44 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c20030 18dd24bbec44313f50c73a2d555b63bd 453 Pfam PF01554 MatE 26 186 3.1E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c20030 18dd24bbec44313f50c73a2d555b63bd 453 Pfam PF01554 MatE 251 406 2.7E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c20030 18dd24bbec44313f50c73a2d555b63bd 453 PIRSF PIRSF006603 1 453 4.2E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c34020 c7dd5c10529696fcc2da4a99569f75e3 382 SMART SM00283 176 382 3.6E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c34020 c7dd5c10529696fcc2da4a99569f75e3 382 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 248 381 1.2E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c34020 c7dd5c10529696fcc2da4a99569f75e3 382 SUPERFAMILY SSF58104 218 380 1.96E-40 T 12-10-2018 CLSA_c34020 c7dd5c10529696fcc2da4a99569f75e3 382 Gene3D G3DSA:1.10.287.950 175 382 6.4E-39 T 12-10-2018 CLSA_c04510 b2b9f755e6c9489ee44d4fad48f4aed7 172 SUPERFAMILY SSF47413 1 67 2.49E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c04510 b2b9f755e6c9489ee44d4fad48f4aed7 172 SMART SM00530 6 61 1.1E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c04510 b2b9f755e6c9489ee44d4fad48f4aed7 172 Gene3D G3DSA:1.10.260.40 1 65 7.2E-19 T 12-10-2018 CLSA_c04510 b2b9f755e6c9489ee44d4fad48f4aed7 172 Pfam PF01381 Helix-turn-helix 7 60 3.4E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c31880 460334fe48790ddb67fc081577256516 352 Gene3D G3DSA:2.130.10.10 8 352 1.1E-96 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CLSA_c31880 460334fe48790ddb67fc081577256516 352 SUPERFAMILY SSF51004 29 341 4.71E-34 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLSA_c31880 460334fe48790ddb67fc081577256516 352 Pfam PF10282 Lactonase, 7-bladed beta-propeller 11 351 5.5E-102 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller CLSA_c10500 04b8c5a32a02e899c44a26f9e03dabcb 435 SUPERFAMILY SSF51905 5 397 8.44E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c10500 04b8c5a32a02e899c44a26f9e03dabcb 435 Gene3D G3DSA:3.50.50.60 6 381 1.3E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c10500 04b8c5a32a02e899c44a26f9e03dabcb 435 Gene3D G3DSA:3.90.700.10 228 325 1.3E-126 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c10500 04b8c5a32a02e899c44a26f9e03dabcb 435 Pfam PF00890 FAD binding domain 6 370 4.5E-73 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c10500 04b8c5a32a02e899c44a26f9e03dabcb 435 SUPERFAMILY SSF56425 221 330 1.12E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 Pfam PF00005 ABC transporter 22 146 5.7E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 Pfam PF00005 ABC transporter 326 451 3.5E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 SUPERFAMILY SSF52540 3 194 6.3E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 Gene3D G3DSA:3.40.50.300 2 245 1.7E-38 T 12-10-2018 CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 SMART SM00382 334 491 1.8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 SMART SM00382 30 190 3.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 SUPERFAMILY SSF52540 299 490 9.04E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 Gene3D G3DSA:3.40.50.300 273 492 2.9E-37 T 12-10-2018 CLSA_c20340 f9deec0323916dfd322b7f3b2fa5b3b8 492 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c00820 2e3312072171f58f8ee0eab19031b0b4 280 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 33 263 6.1E-87 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CLSA_c00820 2e3312072171f58f8ee0eab19031b0b4 280 ProSitePatterns PS01215 Mrp family signature. 147 163 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 CLSA_c00820 2e3312072171f58f8ee0eab19031b0b4 280 Gene3D G3DSA:3.40.50.300 22 277 1.5E-70 T 12-10-2018 CLSA_c00820 2e3312072171f58f8ee0eab19031b0b4 280 SUPERFAMILY SSF52540 29 261 1.52E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c00820 2e3312072171f58f8ee0eab19031b0b4 280 Hamap MF_02040 Iron-sulfur cluster carrier protein. 23 270 32.931 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 Pfam PF02603 HPr Serine kinase N terminus 3 125 2.7E-41 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 Gene3D G3DSA:3.40.1390.20 2 127 3.4E-41 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 3 295 9.4E-108 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 SUPERFAMILY SSF53795 132 286 7.94E-36 T 12-10-2018 CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 Gene3D G3DSA:3.40.50.300 128 302 7.0E-64 T 12-10-2018 CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 Pfam PF07475 HPr Serine kinase C-terminal domain 128 296 2.0E-69 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 302 38.492 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CLSA_c30650 3043f74b54289c5ffc17f34a8bf0ee96 303 SUPERFAMILY SSF75138 4 129 1.23E-33 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CLSA_c04450 cb4d7c86cfc97ea2a1cadd17ef63713f 326 SUPERFAMILY SSF56349 50 315 3.83E-51 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c04450 cb4d7c86cfc97ea2a1cadd17ef63713f 326 Pfam PF00589 Phage integrase family 161 314 1.2E-31 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c04450 cb4d7c86cfc97ea2a1cadd17ef63713f 326 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 55 132 5.2E-15 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLSA_c04450 cb4d7c86cfc97ea2a1cadd17ef63713f 326 Gene3D G3DSA:1.10.443.10 149 325 6.1E-46 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c04450 cb4d7c86cfc97ea2a1cadd17ef63713f 326 Gene3D G3DSA:1.10.150.130 46 148 1.3E-11 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c42670 77c7b8446f64d13889015718d8a822bf 701 Pfam PF13245 AAA domain 206 526 1.4E-11 T 12-10-2018 CLSA_c42670 77c7b8446f64d13889015718d8a822bf 701 Gene3D G3DSA:3.40.50.300 555 701 2.3E-34 T 12-10-2018 CLSA_c42670 77c7b8446f64d13889015718d8a822bf 701 Gene3D G3DSA:1.10.10.160 402 470 2.9E-10 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily CLSA_c42670 77c7b8446f64d13889015718d8a822bf 701 SUPERFAMILY SSF52540 195 699 1.98E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c42670 77c7b8446f64d13889015718d8a822bf 701 Gene3D G3DSA:3.40.50.300 191 341 2.2E-11 T 12-10-2018 CLSA_c42670 77c7b8446f64d13889015718d8a822bf 701 Gene3D G3DSA:3.40.50.300 471 526 2.9E-10 T 12-10-2018 CLSA_c41230 e77b34d35e8b0b300de9216fb3fbef3a 289 Gene3D G3DSA:3.90.550.10 1 287 7.7E-96 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41230 e77b34d35e8b0b300de9216fb3fbef3a 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 263 1.2E-124 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CLSA_c41230 e77b34d35e8b0b300de9216fb3fbef3a 289 SUPERFAMILY SSF53448 1 267 4.8E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41230 e77b34d35e8b0b300de9216fb3fbef3a 289 Pfam PF00483 Nucleotidyl transferase 5 263 1.5E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c41240 8f892f5a81b8273f76603b70a7483553 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.1E-23 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLSA_c41240 8f892f5a81b8273f76603b70a7483553 371 Gene3D G3DSA:3.40.50.720 4 323 2.8E-109 T 12-10-2018 CLSA_c41240 8f892f5a81b8273f76603b70a7483553 371 SUPERFAMILY SSF55347 140 325 2.35E-37 T 12-10-2018 CLSA_c41240 8f892f5a81b8273f76603b70a7483553 371 SUPERFAMILY SSF51735 1 177 1.74E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c41240 8f892f5a81b8273f76603b70a7483553 371 Gene3D G3DSA:3.30.360.10 140 342 2.8E-109 T 12-10-2018 CLSA_c41240 8f892f5a81b8273f76603b70a7483553 371 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 243 4.0E-9 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CLSA_c33060 603982860d1216e32f642d9372cd2ac4 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 15 153 7.9E-58 T 12-10-2018 IPR014203 Sporulation stage V, protein AC CLSA_c33060 603982860d1216e32f642d9372cd2ac4 159 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 149 4.3E-37 T 12-10-2018 IPR005562 SpoVA CLSA_c00510 fed4e046b0de2bb9f430cafe051ae536 231 SMART SM00530 16 71 7.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c00510 fed4e046b0de2bb9f430cafe051ae536 231 Pfam PF12844 Helix-turn-helix domain 14 71 1.6E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c00510 fed4e046b0de2bb9f430cafe051ae536 231 Gene3D G3DSA:1.10.260.40 10 97 1.7E-11 T 12-10-2018 CLSA_c00510 fed4e046b0de2bb9f430cafe051ae536 231 SUPERFAMILY SSF47413 12 73 1.42E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c00510 fed4e046b0de2bb9f430cafe051ae536 231 SUPERFAMILY SSF51306 131 205 9.24E-9 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CLSA_c37200 7eb5840e5922fb003ba9ded3004f6aad 162 Pfam PF00892 EamA-like transporter family 25 161 4.7E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c37200 7eb5840e5922fb003ba9ded3004f6aad 162 SUPERFAMILY SSF103481 91 161 2.75E-6 T 12-10-2018 CLSA_c04690 326c3bc969387e2041b72087b788b418 189 SUPERFAMILY SSF75169 96 188 1.1E-11 T 12-10-2018 IPR027396 DsrEFH-like CLSA_c04690 326c3bc969387e2041b72087b788b418 189 Gene3D G3DSA:3.30.110.40 2 83 1.0E-5 T 12-10-2018 IPR036868 TusA-like domain superfamily CLSA_c04690 326c3bc969387e2041b72087b788b418 189 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 189 1.5E-39 T 12-10-2018 IPR019870 Selenium metabolism protein YedF CLSA_c42400 629fe2654595d6f3635b750530b332f9 255 PIRSF PIRSF016557 1 253 1.5E-78 T 12-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 CLSA_c42400 629fe2654595d6f3635b750530b332f9 255 SUPERFAMILY SSF89550 1 198 8.44E-16 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c42400 629fe2654595d6f3635b750530b332f9 255 Gene3D G3DSA:3.20.20.140 1 255 1.6E-83 T 12-10-2018 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 SMART SM00938 4 105 3.8E-49 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 SUPERFAMILY SSF54913 1 112 2.0E-40 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-37 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-43 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 PRINTS PR00340 P-II protein signature 2 17 5.7E-34 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 PRINTS PR00340 P-II protein signature 52 75 5.7E-34 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 PRINTS PR00340 P-II protein signature 23 41 5.7E-34 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c44720 f1c30856d7ba48679e0a8f8cc1f561f9 112 PRINTS PR00340 P-II protein signature 83 103 5.7E-34 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 SMART SM00729 4 212 5.1E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 247 334 2.7E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 PIRSF PIRSF037420 1 340 1.7E-47 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 Pfam PF13186 Iron-sulfur cluster-binding domain 247 306 1.3E-6 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 Pfam PF13394 4Fe-4S single cluster domain 11 110 8.6E-8 T 12-10-2018 CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 Pfam PF04055 Radical SAM superfamily 10 171 3.2E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 SUPERFAMILY SSF102114 5 315 3.01E-58 T 12-10-2018 CLSA_c19020 ecb14fb2e1d13628ea46d4135c770174 340 Gene3D G3DSA:3.20.20.70 4 298 7.5E-47 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c10590 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 97 185 1.2E-20 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c10590 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 2 62 3.61E-12 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c10590 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 132 184 3.5E-9 T 12-10-2018 CLSA_c10590 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 11 56 4.7E-8 T 12-10-2018 CLSA_c43500 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 97 185 1.2E-20 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c43500 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 2 62 3.61E-12 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c43500 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 132 184 3.5E-9 T 12-10-2018 CLSA_c43500 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 11 56 4.7E-8 T 12-10-2018 CLSA_c35150 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 97 185 1.2E-20 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c35150 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 2 62 3.61E-12 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c35150 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 132 184 3.5E-9 T 12-10-2018 CLSA_c35150 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 11 56 4.7E-8 T 12-10-2018 CLSA_c35750 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 97 185 1.2E-20 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c35750 10b6f86afbb0b8443d4b507b2cea56ee 226 SUPERFAMILY SSF48295 2 62 3.61E-12 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c35750 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 132 184 3.5E-9 T 12-10-2018 CLSA_c35750 10b6f86afbb0b8443d4b507b2cea56ee 226 Pfam PF13518 Helix-turn-helix domain 11 56 4.7E-8 T 12-10-2018 CLSA_c37990 58c41cd311661ebc5ade2a63a09bfd1c 283 Gene3D G3DSA:3.90.70.10 80 259 4.4E-8 T 12-10-2018 CLSA_c37990 58c41cd311661ebc5ade2a63a09bfd1c 283 Pfam PF13529 Peptidase_C39 like family 81 212 1.5E-7 T 12-10-2018 IPR039564 Peptidase C39-like CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 SUPERFAMILY SSF55874 374 544 1.7E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 SMART SM00387 431 545 1.4E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Gene3D G3DSA:3.30.565.10 393 555 9.9E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 SUPERFAMILY SSF55785 204 293 4.54E-10 T 12-10-2018 IPR035965 PAS domain superfamily CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 SMART SM00388 313 385 5.9E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Gene3D G3DSA:3.30.450.40 15 168 1.2E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 4.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 4.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 484 4.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 498 4.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 SUPERFAMILY SSF47384 302 385 1.26E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Gene3D G3DSA:1.10.287.130 295 386 7.0E-19 T 12-10-2018 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 SUPERFAMILY SSF55781 33 189 1.96E-6 T 12-10-2018 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Gene3D G3DSA:3.30.450.20 191 294 1.0E-12 T 12-10-2018 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 385 1.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 543 8.0E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c17370 ee48b83cf1b75dc6fd258677ee7e10ee 576 Pfam PF08447 PAS fold 209 288 2.2E-8 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 CLSA_c26420 52909cbc411a00f88de673eb23fb3b59 163 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 65 78 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CLSA_c26420 52909cbc411a00f88de673eb23fb3b59 163 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 143 9.3E-36 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c26420 52909cbc411a00f88de673eb23fb3b59 163 Gene3D G3DSA:3.40.980.10 1 163 1.2E-53 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c26420 52909cbc411a00f88de673eb23fb3b59 163 SUPERFAMILY SSF53218 2 153 6.28E-44 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c26420 52909cbc411a00f88de673eb23fb3b59 163 SMART SM00852 5 149 6.6E-25 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c26420 52909cbc411a00f88de673eb23fb3b59 163 Pfam PF00994 Probable molybdopterin binding domain 5 148 2.5E-35 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c30980 420068b3b9798f41fe89a9ecd8d4c0a2 439 Gene3D G3DSA:1.10.3080.10 28 417 2.1E-59 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CLSA_c30980 420068b3b9798f41fe89a9ecd8d4c0a2 439 SUPERFAMILY SSF81340 24 414 1.31E-81 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 CLSA_c30980 420068b3b9798f41fe89a9ecd8d4c0a2 439 Pfam PF00654 Voltage gated chloride channel 72 404 8.7E-66 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLSA_c13630 2b3770006afa9750c13e6188438b5dbb 72 Pfam PF01192 RNA polymerase Rpb6 12 64 9.0E-14 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CLSA_c13630 2b3770006afa9750c13e6188438b5dbb 72 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 5 62 8.7E-13 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c13630 2b3770006afa9750c13e6188438b5dbb 72 Gene3D G3DSA:3.90.940.10 5 72 5.6E-21 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CLSA_c13630 2b3770006afa9750c13e6188438b5dbb 72 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 5 65 15.414 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLSA_c13630 2b3770006afa9750c13e6188438b5dbb 72 SMART SM01409 12 64 6.8E-14 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CLSA_c13630 2b3770006afa9750c13e6188438b5dbb 72 SUPERFAMILY SSF63562 5 70 2.22E-22 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CLSA_c38770 f38a0d0bc0da907d4e0ee9eb3739c0d3 99 SUPERFAMILY SSF54736 14 98 8.89E-25 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLSA_c38770 f38a0d0bc0da907d4e0ee9eb3739c0d3 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 6 94 22.982 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CLSA_c38770 f38a0d0bc0da907d4e0ee9eb3739c0d3 99 Gene3D G3DSA:3.30.1390.10 1 99 6.1E-38 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLSA_c38770 f38a0d0bc0da907d4e0ee9eb3739c0d3 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 16 95 5.0E-30 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CLSA_c39830 22915b320bd96d494db97b1af0510cbd 162 Gene3D G3DSA:3.30.1330.200 4 161 1.0E-48 T 12-10-2018 IPR038592 CheD-like superfamily CLSA_c39830 22915b320bd96d494db97b1af0510cbd 162 Pfam PF03975 CheD chemotactic sensory transduction 49 153 1.3E-36 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CLSA_c39830 22915b320bd96d494db97b1af0510cbd 162 SUPERFAMILY SSF64438 5 160 6.5E-48 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLSA_c39830 22915b320bd96d494db97b1af0510cbd 162 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 2 158 27.461 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CLSA_c35940 b963dbd98a9040dc444af46bcf6d5705 292 Gene3D G3DSA:3.40.190.290 92 289 3.2E-9 T 12-10-2018 CLSA_c35940 b963dbd98a9040dc444af46bcf6d5705 292 SUPERFAMILY SSF53850 92 288 5.97E-11 T 12-10-2018 CLSA_c35940 b963dbd98a9040dc444af46bcf6d5705 292 Gene3D G3DSA:1.10.10.10 1 91 1.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c35940 b963dbd98a9040dc444af46bcf6d5705 292 SUPERFAMILY SSF46785 1 86 2.04E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c35940 b963dbd98a9040dc444af46bcf6d5705 292 Pfam PF03466 LysR substrate binding domain 92 282 1.2E-11 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c35940 b963dbd98a9040dc444af46bcf6d5705 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 PRINTS PR00095 Anthranilate synthase component I signature 420 434 3.4E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 PRINTS PR00095 Anthranilate synthase component I signature 326 339 3.4E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 PRINTS PR00095 Anthranilate synthase component I signature 435 449 3.4E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 PRINTS PR00095 Anthranilate synthase component I signature 340 353 3.4E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 SUPERFAMILY SSF56322 64 486 5.23E-139 T 12-10-2018 IPR005801 ADC synthase GO:0009058 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 Gene3D G3DSA:3.60.120.10 21 487 1.9E-156 T 12-10-2018 IPR005801 ADC synthase GO:0009058 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 Pfam PF00425 chorismate binding enzyme 224 478 1.6E-96 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 52 485 2.5E-159 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c23620 17c8e45b57829a76c49d243ea03599a6 487 Pfam PF04715 Anthranilate synthase component I, N terminal region 52 175 2.6E-20 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLSA_c00250 459efd61219b375d0a5d86515926ebe5 394 SUPERFAMILY SSF48452 143 216 7.85E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c00250 459efd61219b375d0a5d86515926ebe5 394 SUPERFAMILY SSF141523 271 393 4.84E-25 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c00250 459efd61219b375d0a5d86515926ebe5 394 Gene3D G3DSA:1.25.40.10 118 265 1.0E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c00250 459efd61219b375d0a5d86515926ebe5 394 Gene3D G3DSA:2.40.440.10 272 394 3.3E-30 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c00250 459efd61219b375d0a5d86515926ebe5 394 Pfam PF03734 L,D-transpeptidase catalytic domain 272 393 4.7E-20 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLSA_c38870 8c4d7affb3492501402cdbed459b210d 255 Gene3D G3DSA:3.40.50.300 1 242 3.5E-69 T 12-10-2018 CLSA_c38870 8c4d7affb3492501402cdbed459b210d 255 SMART SM00382 33 221 6.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c38870 8c4d7affb3492501402cdbed459b210d 255 SUPERFAMILY SSF52540 4 225 1.36E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38870 8c4d7affb3492501402cdbed459b210d 255 Pfam PF00005 ABC transporter 25 172 4.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c31830 2c892042464434607f6305cd5fce0603 360 SUPERFAMILY SSF69279 12 175 6.8E-24 T 12-10-2018 CLSA_c31830 2c892042464434607f6305cd5fce0603 360 Gene3D G3DSA:2.30.110.50 31 99 1.8E-6 T 12-10-2018 CLSA_c31830 2c892042464434607f6305cd5fce0603 360 Gene3D G3DSA:3.55.50.10 100 164 1.8E-6 T 12-10-2018 CLSA_c15160 9f1d7ad0d7e8a06c6d0fa27b32471660 260 Gene3D G3DSA:3.60.10.10 1 260 3.7E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLSA_c15160 9f1d7ad0d7e8a06c6d0fa27b32471660 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 1.8E-13 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CLSA_c15160 9f1d7ad0d7e8a06c6d0fa27b32471660 260 SUPERFAMILY SSF56219 1 258 2.62E-37 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 SUPERFAMILY SSF56784 6 257 8.15E-67 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 Pfam PF13242 HAD-hyrolase-like 185 256 4.8E-18 T 12-10-2018 CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 10 235 2.0E-48 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 Gene3D G3DSA:3.40.50.1000 10 249 3.2E-80 T 12-10-2018 IPR023214 HAD superfamily CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 PIRSF PIRSF000915 2 265 1.7E-63 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 Gene3D G3DSA:3.40.50.1000 87 186 3.2E-80 T 12-10-2018 IPR023214 HAD superfamily CLSA_c18090 5517af439f9393231ab1e96d1e199105 266 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 109 2.6E-28 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 SUPERFAMILY SSF56235 21 263 7.29E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 Pfam PF13522 Glutamine amidotransferase domain 84 215 2.7E-20 T 12-10-2018 CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 Gene3D G3DSA:3.60.20.10 21 463 3.9E-163 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 Pfam PF00156 Phosphoribosyl transferase domain 287 392 6.8E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 SUPERFAMILY SSF53271 257 466 4.72E-70 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 21 462 1.3E-161 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 PIRSF PIRSF000485 17 476 2.5E-173 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 20 461 46.75 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CLSA_c12990 b8096d93656d502f3677718d4b8f90ee 476 Gene3D G3DSA:3.40.50.2020 281 445 3.9E-163 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 SUPERFAMILY SSF50692 876 1000 5.42E-35 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Gene3D G3DSA:1.10.3480.10 15 229 4.0E-35 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Pfam PF02613 Nitrate reductase delta subunit 62 191 6.4E-21 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 SUPERFAMILY SSF53706 272 883 3.4E-154 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 254 1001 6.5E-299 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 918 945 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Gene3D G3DSA:2.40.40.20 857 1001 6.3E-41 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Gene3D G3DSA:3.40.228.10 541 615 3.3E-17 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Pfam PF00384 Molybdopterin oxidoreductase 323 769 1.0E-78 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Pfam PF01568 Molydopterin dinucleotide binding domain 882 993 4.7E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 SUPERFAMILY SSF89155 8 220 3.4E-33 T 12-10-2018 IPR036411 TorD-like superfamily CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Gene3D G3DSA:3.40.50.740 640 824 2.2E-31 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Gene3D G3DSA:3.40.50.740 256 536 1.3E-79 T 12-10-2018 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 272 316 5.3E-5 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLSA_c40290 eed4a6609c41fc63a66ffd5a82bc623b 1001 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 712 729 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CLSA_c04810 1f8bc93a1c26583a41f7183e7cf6b45a 345 Gene3D G3DSA:3.30.200.20 1 102 2.1E-14 T 12-10-2018 CLSA_c04810 1f8bc93a1c26583a41f7183e7cf6b45a 345 Gene3D G3DSA:3.90.1200.10 104 337 5.0E-55 T 12-10-2018 CLSA_c04810 1f8bc93a1c26583a41f7183e7cf6b45a 345 SUPERFAMILY SSF56112 20 339 4.46E-42 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c04810 1f8bc93a1c26583a41f7183e7cf6b45a 345 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 27 337 2.3E-93 T 12-10-2018 IPR014255 Spore coat protein CotS CLSA_c04810 1f8bc93a1c26583a41f7183e7cf6b45a 345 Pfam PF01633 Choline/ethanolamine kinase 110 258 3.3E-10 T 12-10-2018 CLSA_c20790 d686a45796caa147723af36defccfb01 128 Gene3D G3DSA:3.30.565.10 13 123 1.7E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c20790 d686a45796caa147723af36defccfb01 128 Pfam PF13581 Histidine kinase-like ATPase domain 32 118 7.9E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c20790 d686a45796caa147723af36defccfb01 128 SUPERFAMILY SSF55874 27 116 1.96E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 Gene3D G3DSA:3.40.50.720 99 281 6.2E-109 T 12-10-2018 CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 300 1.5E-28 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 SUPERFAMILY SSF51735 99 278 3.42E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 SUPERFAMILY SSF52283 2 134 9.64E-30 T 12-10-2018 CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 Gene3D G3DSA:3.40.50.720 7 296 6.2E-109 T 12-10-2018 CLSA_c43970 657f04e0eb6af0e096a49634054b5382 302 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 278 6.5E-63 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLSA_c25920 0647d73309e8d3eeef43701f9af3990e 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 37.692 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CLSA_c25920 0647d73309e8d3eeef43701f9af3990e 190 Gene3D G3DSA:3.40.50.2020 3 188 1.4E-48 T 12-10-2018 CLSA_c25920 0647d73309e8d3eeef43701f9af3990e 190 SUPERFAMILY SSF53271 1 184 1.85E-40 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c25920 0647d73309e8d3eeef43701f9af3990e 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 187 1.6E-72 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 Gene3D G3DSA:1.20.1480.50 180 277 5.0E-9 T 12-10-2018 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 287 560 0.004 T 12-10-2018 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 Gene3D G3DSA:1.10.287.950 278 580 7.8E-66 T 12-10-2018 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 SMART SM00304 225 276 5.7E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 528 4.4E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 SMART SM00283 305 580 1.4E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c09990 a537c8c24b86177532cefdb1bf811fa5 581 SUPERFAMILY SSF58104 252 579 1.44E-65 T 12-10-2018 CLSA_c07740 23eddbd7b1a82bce448678f2ed0fc1ac 271 Gene3D G3DSA:3.60.90.10 111 193 5.3E-7 T 12-10-2018 CLSA_c07740 23eddbd7b1a82bce448678f2ed0fc1ac 271 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 270 1.0E-133 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLSA_c07740 23eddbd7b1a82bce448678f2ed0fc1ac 271 Pfam PF02675 S-adenosylmethionine decarboxylase 41 178 1.3E-29 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLSA_c07740 23eddbd7b1a82bce448678f2ed0fc1ac 271 SUPERFAMILY SSF56276 47 183 1.14E-22 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CLSA_c07740 23eddbd7b1a82bce448678f2ed0fc1ac 271 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 271 153.712 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLSA_c07740 23eddbd7b1a82bce448678f2ed0fc1ac 271 PIRSF PIRSF001356 2 271 4.4E-137 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLSA_c43640 9d2b246ea94069edacc9b44f5939382e 191 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 186 4.8E-53 T 12-10-2018 IPR006286 Deglycase PfpI CLSA_c43640 9d2b246ea94069edacc9b44f5939382e 191 Pfam PF01965 DJ-1/PfpI family 2 182 6.3E-44 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CLSA_c43640 9d2b246ea94069edacc9b44f5939382e 191 SUPERFAMILY SSF52317 2 185 1.04E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c43640 9d2b246ea94069edacc9b44f5939382e 191 Gene3D G3DSA:3.40.50.880 1 191 7.1E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c19860 8ed6548d995e8fc727e345122054451c 341 Pfam PF12395 Protein of unknown function 159 262 2.8E-33 T 12-10-2018 IPR022123 Protein of unknown function DUF3658 CLSA_c19860 8ed6548d995e8fc727e345122054451c 341 Pfam PF08874 Domain of unknown function (DUF1835) 5 128 1.4E-29 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 CLSA_c11560 662ffa03df88c37cf577d035a7c20dc5 177 SUPERFAMILY SSF54523 8 107 2.98E-5 T 12-10-2018 CLSA_c11560 662ffa03df88c37cf577d035a7c20dc5 177 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 2.9E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c11560 662ffa03df88c37cf577d035a7c20dc5 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 27 2.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c02780 a3911c03dc879d1b67caaddae4b0e5fb 244 Gene3D G3DSA:2.40.30.170 53 62 1.3E-5 T 12-10-2018 CLSA_c02780 a3911c03dc879d1b67caaddae4b0e5fb 244 Gene3D G3DSA:2.40.50.100 64 97 1.3E-5 T 12-10-2018 CLSA_c02780 a3911c03dc879d1b67caaddae4b0e5fb 244 Pfam PF13437 HlyD family secretion protein 102 204 4.9E-14 T 12-10-2018 CLSA_c02780 a3911c03dc879d1b67caaddae4b0e5fb 244 Gene3D G3DSA:2.40.50.100 102 139 4.7E-12 T 12-10-2018 CLSA_c02780 a3911c03dc879d1b67caaddae4b0e5fb 244 Gene3D G3DSA:2.40.30.170 140 202 4.7E-12 T 12-10-2018 CLSA_c13890 ee59d65380ccba99b24b34a22b1209fc 331 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 330 1.4E-114 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CLSA_c13890 ee59d65380ccba99b24b34a22b1209fc 331 PIRSF PIRSF002465 1 331 9.7E-124 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CLSA_c13890 ee59d65380ccba99b24b34a22b1209fc 331 Gene3D G3DSA:3.40.718.10 1 331 2.0E-131 T 12-10-2018 CLSA_c13890 ee59d65380ccba99b24b34a22b1209fc 331 Pfam PF02504 Fatty acid synthesis protein 1 322 5.7E-109 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CLSA_c13890 ee59d65380ccba99b24b34a22b1209fc 331 SUPERFAMILY SSF53659 1 329 3.62E-100 T 12-10-2018 CLSA_c13890 ee59d65380ccba99b24b34a22b1209fc 331 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 331 140.844 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CLSA_c34750 f4eb903d745935d5ce1def8b6eb9af02 231 SUPERFAMILY SSF56281 1 207 1.09E-18 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c34750 f4eb903d745935d5ce1def8b6eb9af02 231 Pfam PF13483 Beta-lactamase superfamily domain 2 138 5.3E-11 T 12-10-2018 CLSA_c11420 6a295758a9cf62ef6ad49c9970ff1dcb 301 Gene3D G3DSA:3.30.460.10 6 119 6.3E-10 T 12-10-2018 CLSA_c11420 6a295758a9cf62ef6ad49c9970ff1dcb 301 SUPERFAMILY SSF81301 4 78 3.87E-12 T 12-10-2018 CLSA_c11420 6a295758a9cf62ef6ad49c9970ff1dcb 301 Pfam PF01909 Nucleotidyltransferase domain 13 96 3.4E-8 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLSA_c41440 017bd8354cf17cc22b9ca1cd0d3342aa 484 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 466 5.1E-11 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c41440 017bd8354cf17cc22b9ca1cd0d3342aa 484 Pfam PF01943 Polysaccharide biosynthesis protein 7 271 2.9E-22 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c35660 f367f6611aea078d5633e1d7e57b4e3b 359 SUPERFAMILY SSF81901 26 253 1.26E-10 T 12-10-2018 CLSA_c35660 f367f6611aea078d5633e1d7e57b4e3b 359 Gene3D G3DSA:1.25.40.10 17 310 1.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 SUPERFAMILY SSF51569 2 283 7.47E-103 T 12-10-2018 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 2.1E-105 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 Gene3D G3DSA:3.20.20.70 1 284 2.0E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 2 283 2.7E-104 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 2 283 2.3E-148 T 12-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 PIRSF PIRSF001359 1 284 1.9E-114 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c41070 aa1a04048d5c4a611d32a2555ed05cb8 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c06370 8c0f1723a062e93bd203eccf3e9c8c52 618 SMART SM00729 256 479 7.2E-26 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c06370 8c0f1723a062e93bd203eccf3e9c8c52 618 SUPERFAMILY SSF102114 222 601 1.44E-49 T 12-10-2018 CLSA_c06370 8c0f1723a062e93bd203eccf3e9c8c52 618 Pfam PF04055 Radical SAM superfamily 262 417 4.2E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c06370 8c0f1723a062e93bd203eccf3e9c8c52 618 Gene3D G3DSA:3.80.30.20 255 440 1.2E-20 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c06370 8c0f1723a062e93bd203eccf3e9c8c52 618 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 6 611 8.6E-291 T 12-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM CLSA_c10060 9c1bb5c81a3c3884a5730f559150e791 211 SUPERFAMILY SSF53271 1 205 1.02E-46 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c10060 9c1bb5c81a3c3884a5730f559150e791 211 Gene3D G3DSA:3.40.50.2020 2 201 2.9E-68 T 12-10-2018 CLSA_c10060 9c1bb5c81a3c3884a5730f559150e791 211 Gene3D G3DSA:3.30.1310.20 52 114 2.9E-68 T 12-10-2018 CLSA_c10060 9c1bb5c81a3c3884a5730f559150e791 211 Pfam PF00156 Phosphoribosyl transferase domain 7 190 2.7E-23 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 502 2.0E-91 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 Pfam PF07690 Major Facilitator Superfamily 14 406 2.5E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 2.1E-8 T 12-10-2018 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 2.1E-8 T 12-10-2018 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 2.1E-8 T 12-10-2018 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 2.1E-8 T 12-10-2018 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 2.1E-8 T 12-10-2018 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 SUPERFAMILY SSF103473 199 513 4.71E-32 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 SUPERFAMILY SSF103473 1 184 1.31E-44 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 Gene3D G3DSA:1.20.1720.10 10 194 4.3E-51 T 12-10-2018 CLSA_c25010 93a932523cb7c8e67b5fffde3c9b59bf 524 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c10700 1c427cdf5c480be2ce1b58a2000dd94c 339 Gene3D G3DSA:3.40.47.40 5 339 5.4E-155 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily CLSA_c10700 1c427cdf5c480be2ce1b58a2000dd94c 339 SUPERFAMILY SSF53901 60 317 2.54E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 CLSA_c10700 1c427cdf5c480be2ce1b58a2000dd94c 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 11 337 1.1E-151 T 12-10-2018 IPR010894 Stage V sporulation AD CLSA_c10700 1c427cdf5c480be2ce1b58a2000dd94c 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 9 337 1.5E-165 T 12-10-2018 IPR010894 Stage V sporulation AD CLSA_c10700 1c427cdf5c480be2ce1b58a2000dd94c 339 PIRSF PIRSF011570 5 339 1.4E-152 T 12-10-2018 IPR010894 Stage V sporulation AD CLSA_c03230 fbd9649791a2a698e4576794ebc65060 421 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 4.9E-124 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c03230 fbd9649791a2a698e4576794ebc65060 421 SUPERFAMILY SSF53383 1 419 1.05E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c03230 fbd9649791a2a698e4576794ebc65060 421 Gene3D G3DSA:3.40.640.10 1 283 4.6E-95 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c03230 fbd9649791a2a698e4576794ebc65060 421 PIRSF PIRSF001434 1 421 2.0E-120 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c03230 fbd9649791a2a698e4576794ebc65060 421 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 419 3.6E-182 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CLSA_c03230 fbd9649791a2a698e4576794ebc65060 421 Gene3D G3DSA:3.90.1150.10 287 421 3.7E-45 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 Gene3D G3DSA:3.20.20.70 2 275 4.3E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 11 376 3.4E-156 T 12-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 SUPERFAMILY SSF51569 8 288 2.2E-85 T 12-10-2018 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 Gene3D G3DSA:1.10.238.260 277 386 2.4E-29 T 12-10-2018 CLSA_c00870 c4ccbbed0409ebb39754355ca56b71a7 386 Pfam PF00682 HMGL-like 11 270 2.7E-78 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLSA_c13260 02c5c0c33d82bbd96ec0e57a20e4f22f 318 Pfam PF01594 AI-2E family transporter 2 313 1.9E-59 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 SUPERFAMILY SSF143985 211 331 1.06E-38 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 Pfam PF03734 L,D-transpeptidase catalytic domain 338 455 2.4E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 Pfam PF12229 Putative peptidoglycan binding domain 77 190 3.3E-14 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 Pfam PF12229 Putative peptidoglycan binding domain 202 317 3.7E-21 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 Gene3D G3DSA:1.10.269.20 211 333 1.2E-37 T 12-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 SUPERFAMILY SSF141523 335 456 6.54E-31 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c31610 8713da507ed60ba7a50f47367ff9f85b 459 Gene3D G3DSA:2.40.440.10 337 457 7.8E-38 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 Pfam PF01047 MarR family 36 90 2.4E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 SUPERFAMILY SSF46785 11 140 2.59E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 Gene3D G3DSA:1.10.10.10 5 141 3.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17470 1d48d78eb629a93fe77971dd9e88319c 143 SMART SM00347 24 126 3.4E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c12870 9f2f25cb0c69c9768169afc6b10ea81f 342 SUPERFAMILY SSF56752 4 338 2.88E-99 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CLSA_c12870 9f2f25cb0c69c9768169afc6b10ea81f 342 PIRSF PIRSF006468 1 342 2.6E-120 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 CLSA_c12870 9f2f25cb0c69c9768169afc6b10ea81f 342 Pfam PF01063 Amino-transferase class IV 59 297 4.3E-34 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CLSA_c12870 9f2f25cb0c69c9768169afc6b10ea81f 342 Gene3D G3DSA:3.30.470.10 1 161 3.1E-58 T 12-10-2018 CLSA_c12870 9f2f25cb0c69c9768169afc6b10ea81f 342 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 32 341 4.7E-132 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 CLSA_c12870 9f2f25cb0c69c9768169afc6b10ea81f 342 Gene3D G3DSA:3.20.10.10 162 342 7.4E-56 T 12-10-2018 CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 SUPERFAMILY SSF55469 78 269 1.31E-30 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 Gene3D G3DSA:3.40.109.10 60 271 2.2E-35 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 Gene3D G3DSA:3.30.70.20 2 59 2.7E-14 T 12-10-2018 CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 Pfam PF00881 Nitroreductase family 82 254 6.0E-30 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 SUPERFAMILY SSF54862 1 76 1.58E-17 T 12-10-2018 CLSA_c43940 1c7b1b3136f2b00b85a8304fffea1e3e 273 Pfam PF13187 4Fe-4S dicluster domain 8 52 1.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c35120 e3a23cb80a99b8a8502715c64225c967 509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 94 128 5.1E-4 T 12-10-2018 IPR006530 YD repeat CLSA_c35120 e3a23cb80a99b8a8502715c64225c967 509 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 53 89 2.2E-6 T 12-10-2018 IPR006530 YD repeat CLSA_c35120 e3a23cb80a99b8a8502715c64225c967 509 Gene3D G3DSA:3.90.930.1 25 155 2.5E-9 T 12-10-2018 CLSA_c35120 e3a23cb80a99b8a8502715c64225c967 509 Gene3D G3DSA:2.180.10.10 282 395 6.8E-6 T 12-10-2018 CLSA_c35120 e3a23cb80a99b8a8502715c64225c967 509 Pfam PF05593 RHS Repeat 53 89 3.2E-8 T 12-10-2018 IPR031325 RHS repeat CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 Pfam PF01473 Putative cell wall binding repeat 550 569 5.6E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 Pfam PF01473 Putative cell wall binding repeat 484 502 0.17 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 Pfam PF01473 Putative cell wall binding repeat 525 538 4.5E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 Pfam PF01473 Putative cell wall binding repeat 505 522 0.017 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 SUPERFAMILY SSF69360 386 587 2.88E-29 T 12-10-2018 CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 Gene3D G3DSA:2.10.270.10 506 588 1.1E-22 T 12-10-2018 CLSA_c00300 d63895d329838b8f853b6f9ac5a1ec4a 588 Gene3D G3DSA:2.20.120.10 459 505 4.9E-6 T 12-10-2018 CLSA_c08580 f9e3fa7252d99eec37c1436172271727 377 Gene3D G3DSA:1.20.1090.10 186 377 1.0E-50 T 12-10-2018 CLSA_c08580 f9e3fa7252d99eec37c1436172271727 377 SUPERFAMILY SSF56796 3 375 1.44E-113 T 12-10-2018 CLSA_c08580 f9e3fa7252d99eec37c1436172271727 377 Gene3D G3DSA:3.40.50.1970 1 184 6.6E-57 T 12-10-2018 CLSA_c08580 f9e3fa7252d99eec37c1436172271727 377 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 5.8E-109 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLSA_c19980 a8b6900155cba641a9d337d3f806cbdb 194 Pfam PF03358 NADPH-dependent FMN reductase 1 154 2.4E-29 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c19980 a8b6900155cba641a9d337d3f806cbdb 194 Gene3D G3DSA:3.40.50.360 1 194 5.9E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c19980 a8b6900155cba641a9d337d3f806cbdb 194 SUPERFAMILY SSF52218 1 187 3.42E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c21390 cc91fbc6cbfcab4d0c2626c89c8b4770 315 Gene3D G3DSA:1.10.10.10 1 54 1.9E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c21390 cc91fbc6cbfcab4d0c2626c89c8b4770 315 Pfam PF04198 Putative sugar-binding domain 60 304 3.4E-62 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CLSA_c21390 cc91fbc6cbfcab4d0c2626c89c8b4770 315 SUPERFAMILY SSF88659 15 47 2.88E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c21390 cc91fbc6cbfcab4d0c2626c89c8b4770 315 Gene3D G3DSA:3.40.50.1360 56 308 4.6E-69 T 12-10-2018 CLSA_c21390 cc91fbc6cbfcab4d0c2626c89c8b4770 315 SUPERFAMILY SSF100950 58 304 1.13E-61 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c21390 cc91fbc6cbfcab4d0c2626c89c8b4770 315 Pfam PF04545 Sigma-70, region 4 17 46 4.9E-6 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CLSA_c17390 110780f85a7eb36587298157b0de318e 354 Pfam PF00155 Aminotransferase class I and II 25 347 5.4E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c17390 110780f85a7eb36587298157b0de318e 354 Gene3D G3DSA:3.40.640.10 38 259 3.2E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c17390 110780f85a7eb36587298157b0de318e 354 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CLSA_c17390 110780f85a7eb36587298157b0de318e 354 SUPERFAMILY SSF53383 8 351 2.45E-71 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c17390 110780f85a7eb36587298157b0de318e 354 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 54.126 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CLSA_c17390 110780f85a7eb36587298157b0de318e 354 Gene3D G3DSA:3.90.1150.10 20 341 3.2E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c17390 110780f85a7eb36587298157b0de318e 354 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 349 4.8E-93 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CLSA_c44370 7f06546ea16c02692bd39967cd0bfcd6 297 SUPERFAMILY SSF53067 149 285 1.94E-17 T 12-10-2018 CLSA_c44370 7f06546ea16c02692bd39967cd0bfcd6 297 Pfam PF06406 StbA protein 21 285 1.2E-14 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA CLSA_c44370 7f06546ea16c02692bd39967cd0bfcd6 297 SUPERFAMILY SSF53067 1 144 9.06E-25 T 12-10-2018 CLSA_c44370 7f06546ea16c02692bd39967cd0bfcd6 297 Gene3D G3DSA:3.30.420.40 151 275 5.8E-37 T 12-10-2018 CLSA_c44370 7f06546ea16c02692bd39967cd0bfcd6 297 Gene3D G3DSA:3.30.420.40 3 286 5.8E-37 T 12-10-2018 CLSA_c40850 0df673c4ebb36374fd328fe135edfd2a 271 Pfam PF00563 EAL domain 19 252 1.0E-62 T 12-10-2018 IPR001633 EAL domain CLSA_c40850 0df673c4ebb36374fd328fe135edfd2a 271 Gene3D G3DSA:3.20.20.450 13 265 5.1E-84 T 12-10-2018 IPR035919 EAL domain superfamily CLSA_c40850 0df673c4ebb36374fd328fe135edfd2a 271 SUPERFAMILY SSF141868 18 262 5.75E-79 T 12-10-2018 IPR035919 EAL domain superfamily CLSA_c40850 0df673c4ebb36374fd328fe135edfd2a 271 SMART SM00052 12 257 3.1E-88 T 12-10-2018 IPR001633 EAL domain CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 Gene3D G3DSA:1.10.10.60 189 240 1.2E-14 T 12-10-2018 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 Gene3D G3DSA:1.10.10.60 241 294 7.1E-16 T 12-10-2018 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 SUPERFAMILY SSF46689 243 291 4.48E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 Pfam PF12833 Helix-turn-helix domain 214 290 1.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 SMART SM00342 207 290 4.0E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c18210 cca52e665dfb26e26d219a48f573566b 295 SUPERFAMILY SSF46689 193 241 2.37E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c41190 1a3441f163f5da2dd7d0dc92def2446f 382 Pfam PF04326 Putative DNA-binding domain 14 135 2.3E-23 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 CLSA_c41190 1a3441f163f5da2dd7d0dc92def2446f 382 Gene3D G3DSA:3.30.950.30 2 142 3.3E-28 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily CLSA_c41190 1a3441f163f5da2dd7d0dc92def2446f 382 Gene3D G3DSA:3.30.565.60 217 377 1.4E-8 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily CLSA_c28770 9ede005aa290e8941ca0cceedfb1c87d 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 2.4E-145 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLSA_c28770 9ede005aa290e8941ca0cceedfb1c87d 341 Gene3D G3DSA:3.40.1780.10 14 340 4.7E-137 T 12-10-2018 CLSA_c28770 9ede005aa290e8941ca0cceedfb1c87d 341 SUPERFAMILY SSF111337 1 340 2.35E-144 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLSA_c28770 9ede005aa290e8941ca0cceedfb1c87d 341 Gene3D G3DSA:2.40.10.240 64 162 4.7E-137 T 12-10-2018 CLSA_c28770 9ede005aa290e8941ca0cceedfb1c87d 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 1.7E-148 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLSA_c28770 9ede005aa290e8941ca0cceedfb1c87d 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.351 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLSA_c02810 c758d61b1327b41a273b05dcf4c2f917 245 SMART SM00382 35 230 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c02810 c758d61b1327b41a273b05dcf4c2f917 245 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c02810 c758d61b1327b41a273b05dcf4c2f917 245 Pfam PF00005 ABC transporter 26 174 7.3E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c02810 c758d61b1327b41a273b05dcf4c2f917 245 Gene3D G3DSA:3.40.50.300 3 242 2.6E-68 T 12-10-2018 CLSA_c02810 c758d61b1327b41a273b05dcf4c2f917 245 SUPERFAMILY SSF52540 5 234 5.58E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09320 bfcd4f7974f8ad8f26dc4fe24e4ddd45 299 Pfam PF13280 WYL domain 121 294 6.1E-31 T 12-10-2018 IPR026881 WYL domain CLSA_c28160 99f647e95ef53d0c6eb61c127a1d7e97 140 PIRSF PIRSF021328 2 140 5.7E-49 T 12-10-2018 IPR016787 Uncharacterised conserved protein UCP021328 CLSA_c28160 99f647e95ef53d0c6eb61c127a1d7e97 140 Pfam PF11208 Protein of unknown function (DUF2992) 7 140 7.4E-53 T 12-10-2018 IPR016787 Uncharacterised conserved protein UCP021328 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 Gene3D G3DSA:3.30.565.10 115 279 2.5E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 Pfam PF00512 His Kinase A (phospho-acceptor) domain 45 109 1.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 SMART SM00388 44 111 5.6E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 Gene3D G3DSA:1.10.287.130 4 109 8.3E-17 T 12-10-2018 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 SMART SM00387 157 269 1.3E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 SUPERFAMILY SSF47384 31 111 3.92E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 PRINTS PR00344 Bacterial sensor protein C-terminal signature 212 222 7.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 PRINTS PR00344 Bacterial sensor protein C-terminal signature 194 208 7.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 266 7.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 PRINTS PR00344 Bacterial sensor protein C-terminal signature 229 247 7.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 SUPERFAMILY SSF55874 100 267 1.19E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c00270 b91f2c60c0254d9420e7a367d1a9ba74 299 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 158 267 1.2E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c33590 778e9e7ce8cefeb6630de5b202583119 193 Gene3D G3DSA:3.40.50.360 1 192 1.9E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c33590 778e9e7ce8cefeb6630de5b202583119 193 SUPERFAMILY SSF52218 1 191 4.19E-59 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c33590 778e9e7ce8cefeb6630de5b202583119 193 Pfam PF02525 Flavodoxin-like fold 1 187 5.3E-53 T 12-10-2018 IPR003680 Flavodoxin-like fold CLSA_c43480 9b10a93274908285b717598acad96433 317 SUPERFAMILY SSF53067 4 314 2.27E-74 T 12-10-2018 CLSA_c43480 9b10a93274908285b717598acad96433 317 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 311 7.8E-81 T 12-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CLSA_c43480 9b10a93274908285b717598acad96433 317 Gene3D G3DSA:3.30.420.40 129 296 1.7E-109 T 12-10-2018 CLSA_c43480 9b10a93274908285b717598acad96433 317 Gene3D G3DSA:3.30.420.40 6 309 1.7E-109 T 12-10-2018 CLSA_c43480 9b10a93274908285b717598acad96433 317 Pfam PF00480 ROK family 6 310 1.2E-80 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 274 300 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 Pfam PF01012 Electron transfer flavoprotein domain 9 184 1.3E-37 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 SMART SM00893 9 198 1.0E-32 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 SUPERFAMILY SSF52467 210 330 4.67E-50 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 211 293 2.2E-38 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 Gene3D G3DSA:3.40.50.620 5 205 4.0E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 PIRSF PIRSF000089 5 335 2.0E-121 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 SUPERFAMILY SSF52402 7 203 2.23E-48 T 12-10-2018 CLSA_c22560 81c6356d05c6bbd45407f5fdefad9c33 338 Gene3D G3DSA:3.40.50.1220 206 338 3.2E-60 T 12-10-2018 CLSA_c23190 44c11f1346bc531509d2cc55ffa32864 64 Gene3D G3DSA:3.90.650.10 1 64 1.0E-7 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 Pfam PF00005 ABC transporter 21 169 3.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 SUPERFAMILY SSF52540 255 490 5.54E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 Gene3D G3DSA:3.40.50.300 256 497 1.7E-37 T 12-10-2018 CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 SUPERFAMILY SSF52540 3 226 1.33E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 Gene3D G3DSA:3.40.50.300 1 239 7.7E-53 T 12-10-2018 CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 Pfam PF00005 ABC transporter 273 430 6.2E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 SMART SM00382 29 217 4.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c38700 91de1cd1daab8a9549e0d71963c89398 509 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Pfam PF01473 Putative cell wall binding repeat 124 143 1.1E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Pfam PF01473 Putative cell wall binding repeat 103 122 1.5E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Pfam PF01473 Putative cell wall binding repeat 145 163 3.9E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Pfam PF01473 Putative cell wall binding repeat 63 81 1.4E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Pfam PF01473 Putative cell wall binding repeat 83 101 6.1E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Gene3D G3DSA:2.10.270.10 121 200 9.1E-18 T 12-10-2018 CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 SUPERFAMILY SSF69360 45 184 3.61E-46 T 12-10-2018 CLSA_c42380 69fdc0870cab2b8c641615952bea252b 363 Gene3D G3DSA:2.10.270.10 44 120 4.2E-24 T 12-10-2018 CLSA_c02620 22f6ce17e0f956b5607d224e4c2e84f5 277 SUPERFAMILY SSF51219 46 251 2.12E-47 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily CLSA_c02620 22f6ce17e0f956b5607d224e4c2e84f5 277 Gene3D G3DSA:3.60.160.10 37 263 4.2E-48 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily CLSA_c02620 22f6ce17e0f956b5607d224e4c2e84f5 277 Pfam PF01987 Mitochondrial biogenesis AIM24 53 250 6.1E-33 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 CLSA_c32670 1c51be308addfec81dd5a8fcf39aa8a5 195 PIRSF PIRSF011489 1 195 2.2E-57 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CLSA_c32670 1c51be308addfec81dd5a8fcf39aa8a5 195 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 3.1E-30 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CLSA_c13530 69d6392ad9337c0dc4cd9d75d00c7d25 220 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 213 9.6E-61 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLSA_c13530 69d6392ad9337c0dc4cd9d75d00c7d25 220 Gene3D G3DSA:1.20.58.220 2 220 5.5E-71 T 12-10-2018 IPR038078 PhoU-like domain superfamily CLSA_c13530 69d6392ad9337c0dc4cd9d75d00c7d25 220 PIRSF PIRSF003107 1 220 4.4E-61 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLSA_c13530 69d6392ad9337c0dc4cd9d75d00c7d25 220 SUPERFAMILY SSF109755 4 218 7.74E-66 T 12-10-2018 CLSA_c13530 69d6392ad9337c0dc4cd9d75d00c7d25 220 Pfam PF01895 PhoU domain 18 105 2.9E-22 T 12-10-2018 IPR026022 PhoU domain CLSA_c13530 69d6392ad9337c0dc4cd9d75d00c7d25 220 Pfam PF01895 PhoU domain 123 207 3.0E-21 T 12-10-2018 IPR026022 PhoU domain CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 SUPERFAMILY SSF53163 2 326 5.89E-115 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 3 309 3.0E-95 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 Pfam PF03418 Germination protease 253 325 6.7E-11 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 Pfam PF03418 Germination protease 9 248 4.5E-91 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 Hamap MF_00626 Germination protease [gpr]. 1 327 153.588 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 PIRSF PIRSF019549 250 327 9.8E-19 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 PIRSF PIRSF019549 1 258 3.4E-115 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 Gene3D G3DSA:3.40.50.1450 1 327 9.0E-124 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily CLSA_c10760 648c33c98b1179c0b58799a4de73922f 327 TIGRFAM TIGR01441 GPR: GPR endopeptidase 3 249 2.6E-101 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLSA_c25900 9ac70babb8e6b0106d9add9f382b006b 203 Gene3D G3DSA:3.90.79.10 2 195 2.2E-44 T 12-10-2018 CLSA_c25900 9ac70babb8e6b0106d9add9f382b006b 203 ProSitePatterns PS00893 Nudix box signature. 95 116 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLSA_c25900 9ac70babb8e6b0106d9add9f382b006b 203 Pfam PF00293 NUDIX domain 62 174 6.3E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c25900 9ac70babb8e6b0106d9add9f382b006b 203 SUPERFAMILY SSF55811 10 196 4.74E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c41430 4e93411ad105a91b3799dd144cc6981f 324 Pfam PF00892 EamA-like transporter family 169 307 4.3E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c41430 4e93411ad105a91b3799dd144cc6981f 324 Pfam PF00892 EamA-like transporter family 10 156 4.3E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c41430 4e93411ad105a91b3799dd144cc6981f 324 SUPERFAMILY SSF103481 79 160 2.09E-11 T 12-10-2018 CLSA_c41430 4e93411ad105a91b3799dd144cc6981f 324 SUPERFAMILY SSF103481 229 309 7.98E-10 T 12-10-2018 CLSA_c01880 bd74947ae5620780eadfa4f6f86d049d 76 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 21 49 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c01880 bd74947ae5620780eadfa4f6f86d049d 76 Hamap MF_00422 Protein translocase subunit SecE [secE]. 16 72 12.213 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c01880 bd74947ae5620780eadfa4f6f86d049d 76 Gene3D G3DSA:1.20.5.1030 15 72 1.2E-19 T 12-10-2018 IPR038379 SecE superfamily CLSA_c01880 bd74947ae5620780eadfa4f6f86d049d 76 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 19 74 1.7E-19 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CLSA_c01880 bd74947ae5620780eadfa4f6f86d049d 76 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 20 72 1.1E-18 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLSA_c19350 b57a03e898c3d5cc60a5c55856f3216e 91 Pfam PF14542 GCN5-related N-acetyl-transferase 10 89 1.1E-24 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CLSA_c19350 b57a03e898c3d5cc60a5c55856f3216e 91 SUPERFAMILY SSF55729 3 90 2.88E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c19350 b57a03e898c3d5cc60a5c55856f3216e 91 Gene3D G3DSA:3.40.630.30 1 91 9.6E-30 T 12-10-2018 CLSA_c39970 21c288d05edf0c6cacb2065d1c0412a3 463 Gene3D G3DSA:3.90.550.10 32 265 9.2E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39970 21c288d05edf0c6cacb2065d1c0412a3 463 Pfam PF13641 Glycosyltransferase like family 2 45 269 9.5E-29 T 12-10-2018 CLSA_c39970 21c288d05edf0c6cacb2065d1c0412a3 463 SUPERFAMILY SSF53448 44 322 6.83E-45 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c22720 65a77439f31ac5195f42b9bb7e16db2a 275 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 264 44.771 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLSA_c22720 65a77439f31ac5195f42b9bb7e16db2a 275 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 265 1.5E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLSA_c22720 65a77439f31ac5195f42b9bb7e16db2a 275 Gene3D G3DSA:3.20.20.60 1 275 2.9E-118 T 12-10-2018 CLSA_c22720 65a77439f31ac5195f42b9bb7e16db2a 275 PIRSF PIRSF000388 1 267 6.8E-119 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLSA_c22720 65a77439f31ac5195f42b9bb7e16db2a 275 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 4.4E-118 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLSA_c22720 65a77439f31ac5195f42b9bb7e16db2a 275 SUPERFAMILY SSF51621 3 264 1.77E-110 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CLSA_c21350 2d27dd72a9b2d90f4c9a5f3f9a7cdfce 714 SUPERFAMILY SSF52540 335 637 4.13E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21350 2d27dd72a9b2d90f4c9a5f3f9a7cdfce 714 Pfam PF07728 AAA domain (dynein-related subfamily) 358 457 1.6E-6 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CLSA_c18980 d4ddec50672b66c4bd772d3dd78193dd 64 Pfam PF10114 Sensory domain found in PocR 6 60 2.4E-7 T 12-10-2018 IPR018771 PocR domain CLSA_c04220 0a0f070350eb1e28a79ed2c6a04fff8f 357 Pfam PF13407 Periplasmic binding protein domain 41 321 7.3E-51 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c04220 0a0f070350eb1e28a79ed2c6a04fff8f 357 Gene3D G3DSA:3.40.50.2300 41 322 1.7E-90 T 12-10-2018 CLSA_c04220 0a0f070350eb1e28a79ed2c6a04fff8f 357 SUPERFAMILY SSF53822 37 338 2.36E-64 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c04220 0a0f070350eb1e28a79ed2c6a04fff8f 357 Gene3D G3DSA:3.40.50.2300 149 300 1.7E-90 T 12-10-2018 CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 55 225 1.9E-47 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 Gene3D G3DSA:3.30.70.260 131 209 1.3E-59 T 12-10-2018 CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 SUPERFAMILY SSF75445 135 211 6.93E-16 T 12-10-2018 CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 226 1.1E-49 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 SUPERFAMILY SSF100950 10 151 2.06E-34 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 SMART SM01134 7 147 0.0016 T 12-10-2018 CLSA_c10260 e0686fccb787a884a4192e913a303f04 232 Gene3D G3DSA:3.40.50.1360 13 225 1.3E-59 T 12-10-2018 CLSA_c08680 77c441a8848c3682d78fe924ea3cb3eb 123 SMART SM00345 17 76 4.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c08680 77c441a8848c3682d78fe924ea3cb3eb 123 SUPERFAMILY SSF46785 6 80 4.53E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c08680 77c441a8848c3682d78fe924ea3cb3eb 123 Gene3D G3DSA:1.10.10.10 10 123 1.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c08680 77c441a8848c3682d78fe924ea3cb3eb 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.8E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 Pfam PF01312 FlhB HrpN YscU SpaS Family 266 607 1.9E-120 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 Pfam PF01311 Bacterial export proteins, family 1 8 240 5.3E-53 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 467 485 2.8E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 562 583 2.8E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 487 504 2.8E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 291 2.8E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 531 546 2.8E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 SUPERFAMILY SSF160544 503 611 1.7E-36 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 Gene3D G3DSA:3.40.1690.10 477 613 4.7E-53 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CLSA_c39220 054cc0b9690f203b09a9dbf211d6797f 613 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 266 613 5.0E-119 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CLSA_c41450 edd3020dded677bb843e2343009a149a 321 SUPERFAMILY SSF103481 81 160 4.84E-13 T 12-10-2018 CLSA_c41450 edd3020dded677bb843e2343009a149a 321 Pfam PF00892 EamA-like transporter family 169 306 1.0E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c41450 edd3020dded677bb843e2343009a149a 321 Pfam PF00892 EamA-like transporter family 10 157 2.6E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c41450 edd3020dded677bb843e2343009a149a 321 SUPERFAMILY SSF103481 227 308 6.67E-12 T 12-10-2018 CLSA_c36660 b0c0349b5c7a4a0486959f5ffc63fcfc 472 SUPERFAMILY SSF69279 17 179 3.91E-22 T 12-10-2018 CLSA_c36660 b0c0349b5c7a4a0486959f5ffc63fcfc 472 Gene3D G3DSA:3.55.50.10 104 168 1.2E-7 T 12-10-2018 CLSA_c36660 b0c0349b5c7a4a0486959f5ffc63fcfc 472 Pfam PF05954 Phage late control gene D protein (GPD) 41 170 1.1E-10 T 12-10-2018 CLSA_c36660 b0c0349b5c7a4a0486959f5ffc63fcfc 472 Gene3D G3DSA:2.30.110.50 52 103 1.2E-7 T 12-10-2018 CLSA_c36660 b0c0349b5c7a4a0486959f5ffc63fcfc 472 SUPERFAMILY SSF69255 307 367 5.23E-5 T 12-10-2018 CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 Pfam PF00226 DnaJ domain 3 65 2.9E-26 T 12-10-2018 IPR001623 DnaJ domain CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 Gene3D G3DSA:1.10.287.110 1 123 1.5E-28 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 SMART SM00271 2 60 1.7E-28 T 12-10-2018 IPR001623 DnaJ domain CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 SUPERFAMILY SSF46565 2 70 2.62E-26 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 PRINTS PR00625 DnaJ domain signature 5 23 3.4E-20 T 12-10-2018 IPR001623 DnaJ domain CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 PRINTS PR00625 DnaJ domain signature 23 38 3.4E-20 T 12-10-2018 IPR001623 DnaJ domain CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 PRINTS PR00625 DnaJ domain signature 144 146 3.4E-20 T 12-10-2018 IPR001623 DnaJ domain CLSA_c08040 6eba08f8e1e3d0decab57f72ae530432 146 PRINTS PR00625 DnaJ domain signature 40 60 3.4E-20 T 12-10-2018 IPR001623 DnaJ domain CLSA_c06750 bda0c7a93e7dfaa72f19425804bc9e35 597 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 418 539 2.1E-33 T 12-10-2018 IPR025299 CstA, C-terminal domain CLSA_c06750 bda0c7a93e7dfaa72f19425804bc9e35 597 Pfam PF02554 Carbon starvation protein CstA 1 367 4.6E-148 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 Pfam PF03471 Transporter associated domain 352 428 1.0E-19 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 Gene3D G3DSA:3.30.465.10 345 427 8.9E-22 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 SUPERFAMILY SSF56176 349 427 1.17E-19 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 SMART SM01091 351 429 2.2E-21 T 12-10-2018 IPR005170 Transporter-associated domain CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 Pfam PF01595 Domain of unknown function DUF21 8 202 1.1E-51 T 12-10-2018 IPR002550 CNNM, transmembrane domain CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 SUPERFAMILY SSF54631 212 352 7.56E-32 T 12-10-2018 CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 Pfam PF00571 CBS domain 287 336 4.4E-7 T 12-10-2018 IPR000644 CBS domain CLSA_c30460 b070d3a1f32072e488b5fc48bbce694c 429 Gene3D G3DSA:3.10.580.10 197 344 4.0E-53 T 12-10-2018 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 Gene3D G3DSA:3.60.70.12 2 189 1.4E-70 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 Pfam PF01960 ArgJ family 18 407 2.4E-151 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 407 145.925 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 Gene3D G3DSA:3.10.20.340 275 407 2.1E-47 T 12-10-2018 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 6 407 1.4E-149 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 SUPERFAMILY SSF56266 13 404 5.36E-135 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 Gene3D G3DSA:3.30.2330.10 190 274 6.2E-29 T 12-10-2018 CLSA_c07170 250cfc0606dab1c0bbe51baeba4c38af 407 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 37 405 2.0E-108 T 12-10-2018 CLSA_c27610 1eab6b3d41fc1ccd2609c399385014c8 82 Pfam PF12637 TSCPD domain 4 75 1.2E-32 T 12-10-2018 IPR024434 TSCPD domain CLSA_c27610 1eab6b3d41fc1ccd2609c399385014c8 82 TIGRFAM TIGR03905 TIGR03905_4_Cys: uncharacterized protein TIGR03905 3 75 3.1E-32 T 12-10-2018 IPR023806 Conserved hypothetical protein CHP03905 CLSA_c21990 334683dc7e8a95b2d4ba6a7ca1ec6f41 221 Gene3D G3DSA:1.10.3720.10 1 218 1.1E-52 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c21990 334683dc7e8a95b2d4ba6a7ca1ec6f41 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.0E-30 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CLSA_c21990 334683dc7e8a95b2d4ba6a7ca1ec6f41 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 1.4E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c21990 334683dc7e8a95b2d4ba6a7ca1ec6f41 221 SUPERFAMILY SSF161098 15 200 4.84E-43 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c29550 c5b961264759f7f5cc683f28d1aee335 141 Pfam PF01381 Helix-turn-helix 10 61 3.8E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c29550 c5b961264759f7f5cc683f28d1aee335 141 Gene3D G3DSA:1.10.260.40 3 70 1.2E-11 T 12-10-2018 CLSA_c29550 c5b961264759f7f5cc683f28d1aee335 141 SMART SM00530 9 65 8.9E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c29550 c5b961264759f7f5cc683f28d1aee335 141 SUPERFAMILY SSF47413 5 69 2.14E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c22590 7f57f8de9801771d203fb750bae03107 406 SUPERFAMILY SSF89796 1 399 3.92E-86 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily CLSA_c22590 7f57f8de9801771d203fb750bae03107 406 Gene3D G3DSA:3.40.50.10540 3 391 3.9E-88 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily CLSA_c22590 7f57f8de9801771d203fb750bae03107 406 Pfam PF02515 CoA-transferase family III 4 376 3.7E-82 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 CLSA_c22590 7f57f8de9801771d203fb750bae03107 406 Gene3D G3DSA:3.30.1540.10 230 329 3.9E-88 T 12-10-2018 CLSA_c25320 0a9f5efb6d83da0690c9ce0fe6fbfc2b 402 SUPERFAMILY SSF103473 9 398 4.71E-63 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c25320 0a9f5efb6d83da0690c9ce0fe6fbfc2b 402 Pfam PF07690 Major Facilitator Superfamily 19 267 3.5E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c25320 0a9f5efb6d83da0690c9ce0fe6fbfc2b 402 Gene3D G3DSA:1.20.1250.20 221 400 2.6E-23 T 12-10-2018 CLSA_c25320 0a9f5efb6d83da0690c9ce0fe6fbfc2b 402 Gene3D G3DSA:1.20.1250.20 13 207 2.0E-31 T 12-10-2018 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Gene3D G3DSA:3.90.199.10 32 485 6.8E-221 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 805 24.913 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Gene3D G3DSA:2.120.10.90 494 805 4.0E-122 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 803 0.0 T 12-10-2018 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 SMART SM00434 11 463 1.0E-294 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 SUPERFAMILY SSF56719 30 485 2.75E-184 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 470 2.6E-165 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Gene3D G3DSA:3.30.1360.40 236 331 6.8E-221 T 12-10-2018 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 SUPERFAMILY SSF101904 497 813 3.01E-106 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 553 601 6.7E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 706 753 1.0E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 694 3.6E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 649 1.2E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 502 549 1.0E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 757 800 2.6E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLSA_c00070 4e7418041b24d60bb6c2d311c0001f1f 830 Gene3D G3DSA:1.10.268.10 368 456 6.8E-221 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 PRINTS PR01874 DNA repair protein radA signature 247 273 4.3E-48 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 PRINTS PR01874 DNA repair protein radA signature 212 240 4.3E-48 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 PRINTS PR01874 DNA repair protein radA signature 119 136 4.3E-48 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 PRINTS PR01874 DNA repair protein radA signature 77 105 4.3E-48 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 PRINTS PR01874 DNA repair protein radA signature 9 33 4.3E-48 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 PRINTS PR01874 DNA repair protein radA signature 322 345 4.3E-48 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 SUPERFAMILY SSF52540 64 285 2.92E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 452 6.7E-131 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 Gene3D G3DSA:3.30.230.10 277 458 2.5E-13 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 Gene3D G3DSA:3.40.50.300 61 276 1.3E-37 T 12-10-2018 CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 SMART SM00382 85 243 7.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 SUPERFAMILY SSF54211 297 457 1.4E-22 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c01740 bd22c85767e11f071f76df88634649cc 458 Pfam PF13481 AAA domain 66 177 2.5E-11 T 12-10-2018 CLSA_c27480 abd909207d54befa84878133d9da0f10 245 Gene3D G3DSA:3.40.50.150 3 222 7.1E-71 T 12-10-2018 CLSA_c27480 abd909207d54befa84878133d9da0f10 245 Pfam PF13649 Methyltransferase domain 42 136 1.5E-15 T 12-10-2018 CLSA_c27480 abd909207d54befa84878133d9da0f10 245 Gene3D G3DSA:2.20.25.110 144 204 7.1E-71 T 12-10-2018 CLSA_c27480 abd909207d54befa84878133d9da0f10 245 SUPERFAMILY SSF53335 3 245 1.37E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c21060 b02a28525734ff798445f995e5648691 56 Pfam PF07561 Domain of Unknown Function (DUF1540) 13 52 7.7E-13 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 4.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 4.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 4.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 4.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 SUPERFAMILY SSF46785 14 141 2.04E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 SMART SM00347 29 131 1.3E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 Gene3D G3DSA:1.10.10.10 2 143 3.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20020 2f530855396cb8b1826ac6be97654af8 145 Pfam PF01047 MarR family 39 95 1.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 SUPERFAMILY SSF52172 1 178 6.55E-39 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 Gene3D G3DSA:1.10.10.10 120 222 1.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 Gene3D G3DSA:3.40.50.2300 1 119 2.5E-35 T 12-10-2018 CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 Pfam PF00072 Response regulator receiver domain 4 113 7.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 221 2.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 SMART SM00448 2 112 2.9E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20960 0caf272394f8e7ba98588818a5da074a 228 SMART SM00862 144 221 4.0E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c42420 a7d2f8eecabe267cc1db7ff0cb9c78a9 226 Pfam PF02706 Chain length determinant protein 8 96 1.1E-13 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CLSA_c42420 a7d2f8eecabe267cc1db7ff0cb9c78a9 226 Pfam PF13807 G-rich domain on putative tyrosine kinase 152 195 4.2E-10 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 428 2.2E-140 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 428 1.5E-194 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 SUPERFAMILY SSF53383 9 428 5.53E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 Gene3D G3DSA:3.40.640.10 6 292 2.6E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 PIRSF PIRSF001434 1 429 7.7E-127 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c10350 5b2eabf0c82775f2ac40be021a30bc0b 429 Gene3D G3DSA:3.90.1150.10 296 429 4.8E-47 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 Gene3D G3DSA:1.10.10.10 5 135 1.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 SUPERFAMILY SSF46785 5 135 1.18E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 110 130 2.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 96 2.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 SMART SM00347 21 120 7.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c20730 d0a06bbb08f7ee4a8fdf62f63f3f074f 135 Pfam PF12802 MarR family 27 83 3.8E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 205 246 9.8E-8 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Pfam PF02368 Bacterial Ig-like domain (group 2) 263 337 3.6E-9 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 SUPERFAMILY SSF69360 28 141 2.09E-28 T 12-10-2018 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Gene3D G3DSA:2.60.40.1080 258 347 6.4E-12 T 12-10-2018 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 177 243 2.4E-15 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 SMART SM00635 262 341 8.6E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 SUPERFAMILY SSF49373 267 346 1.41E-8 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Gene3D G3DSA:3.10.20.660 173 248 3.0E-14 T 12-10-2018 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Gene3D G3DSA:2.10.270.10 27 144 6.1E-24 T 12-10-2018 CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Pfam PF01473 Putative cell wall binding repeat 49 67 2.4E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41860 b185bfe19b1aded727e9f5ad47c98597 348 Pfam PF01473 Putative cell wall binding repeat 69 87 0.0043 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 SUPERFAMILY SSF69360 263 356 2.88E-20 T 12-10-2018 CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 Pfam PF01473 Putative cell wall binding repeat 300 317 5.5E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 Pfam PF01473 Putative cell wall binding repeat 319 334 0.012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 SMART SM00460 147 203 4.4E-6 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 SUPERFAMILY SSF54001 97 220 7.85E-22 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 Pfam PF01841 Transglutaminase-like superfamily 110 200 1.9E-12 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 Gene3D G3DSA:3.10.620.30 66 218 4.5E-17 T 12-10-2018 CLSA_c14740 66ccb1e0fa80a81639262a9391c985f8 357 Gene3D G3DSA:2.10.270.10 274 357 7.7E-23 T 12-10-2018 CLSA_c29030 e9bd6a22f0018742a957ee9142ee536f 497 Gene3D G3DSA:3.40.50.300 269 421 3.1E-8 T 12-10-2018 CLSA_c29030 e9bd6a22f0018742a957ee9142ee536f 497 SUPERFAMILY SSF52540 2 420 1.09E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c29030 e9bd6a22f0018742a957ee9142ee536f 497 Pfam PF13175 AAA ATPase domain 3 404 1.7E-20 T 12-10-2018 CLSA_c29030 e9bd6a22f0018742a957ee9142ee536f 497 Gene3D G3DSA:3.40.50.300 2 142 1.1E-9 T 12-10-2018 CLSA_c02210 cfad4d15dfa204f0cd4dc96571d2e2b5 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02210 cfad4d15dfa204f0cd4dc96571d2e2b5 146 SUPERFAMILY SSF52080 4 144 4.84E-48 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily CLSA_c02210 cfad4d15dfa204f0cd4dc96571d2e2b5 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.1E-36 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P CLSA_c02210 cfad4d15dfa204f0cd4dc96571d2e2b5 146 Gene3D G3DSA:3.100.10.10 66 146 2.1E-25 T 12-10-2018 CLSA_c02210 cfad4d15dfa204f0cd4dc96571d2e2b5 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 8.1E-53 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02210 cfad4d15dfa204f0cd4dc96571d2e2b5 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 21.949 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CLSA_c25170 5424ef047dc5062a121519cc08684000 425 Gene3D G3DSA:3.40.50.11440 34 269 1.1E-163 T 12-10-2018 CLSA_c25170 5424ef047dc5062a121519cc08684000 425 Gene3D G3DSA:3.90.226.30 6 418 1.1E-163 T 12-10-2018 CLSA_c25170 5424ef047dc5062a121519cc08684000 425 Pfam PF09861 Domain of unknown function (DUF2088) 8 213 3.4E-76 T 12-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 CLSA_c24770 94f70dd42a24497761ea6960013f067b 314 SUPERFAMILY SSF158430 184 307 1.15E-37 T 12-10-2018 CLSA_c24770 94f70dd42a24497761ea6960013f067b 314 Pfam PF11155 Domain of unknown function (DUF2935) 10 177 2.5E-42 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 CLSA_c24770 94f70dd42a24497761ea6960013f067b 314 Pfam PF11155 Domain of unknown function (DUF2935) 191 302 2.7E-35 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 CLSA_c24770 94f70dd42a24497761ea6960013f067b 314 SUPERFAMILY SSF158430 9 190 9.94E-37 T 12-10-2018 CLSA_c24770 94f70dd42a24497761ea6960013f067b 314 Gene3D G3DSA:1.20.1260.120 1 110 2.0E-15 T 12-10-2018 CLSA_c24770 94f70dd42a24497761ea6960013f067b 314 Gene3D G3DSA:1.20.1260.120 111 313 3.8E-63 T 12-10-2018 CLSA_c29460 162ed3c157882a295cb7496f2c2abf88 261 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 152 258 4.2E-22 T 12-10-2018 IPR012657 23S rRNA-intervening sequence protein CLSA_c29460 162ed3c157882a295cb7496f2c2abf88 261 Pfam PF05635 23S rRNA-intervening sequence protein 148 251 2.7E-23 T 12-10-2018 IPR012657 23S rRNA-intervening sequence protein CLSA_c29460 162ed3c157882a295cb7496f2c2abf88 261 Gene3D G3DSA:1.20.1440.60 138 260 7.8E-23 T 12-10-2018 IPR036583 23S rRNA-intervening sequence superfamily CLSA_c29460 162ed3c157882a295cb7496f2c2abf88 261 SUPERFAMILY SSF158446 146 257 1.57E-21 T 12-10-2018 IPR036583 23S rRNA-intervening sequence superfamily CLSA_c21250 b5a5844071dca00147db3e9f2dc68394 304 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c21250 b5a5844071dca00147db3e9f2dc68394 304 Pfam PF00005 ABC transporter 21 161 1.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c21250 b5a5844071dca00147db3e9f2dc68394 304 Gene3D G3DSA:3.40.50.300 1 240 1.3E-55 T 12-10-2018 CLSA_c21250 b5a5844071dca00147db3e9f2dc68394 304 SUPERFAMILY SSF52540 3 224 2.25E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21250 b5a5844071dca00147db3e9f2dc68394 304 SMART SM00382 29 234 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c27250 3a07c48c078841d77b4caf0d4f662749 244 Pfam PF05949 Bacterial protein of unknown function (DUF881) 89 238 6.0E-35 T 12-10-2018 IPR010273 Protein of unknown function DUF881 CLSA_c27250 3a07c48c078841d77b4caf0d4f662749 244 Gene3D G3DSA:3.30.70.1880 88 244 6.8E-30 T 12-10-2018 CLSA_c41090 89d6e24ae54fcdf8bedf4ea28d0338a5 564 Pfam PF02378 Phosphotransferase system, EIIC 28 347 1.7E-65 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLSA_c41090 89d6e24ae54fcdf8bedf4ea28d0338a5 564 SUPERFAMILY SSF52794 463 563 7.06E-16 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c41090 89d6e24ae54fcdf8bedf4ea28d0338a5 564 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 436 557 1.3E-33 T 12-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 CLSA_c41090 89d6e24ae54fcdf8bedf4ea28d0338a5 564 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 421 6.7E-76 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CLSA_c41090 89d6e24ae54fcdf8bedf4ea28d0338a5 564 Gene3D G3DSA:3.40.50.2300 456 562 1.3E-28 T 12-10-2018 CLSA_c41090 89d6e24ae54fcdf8bedf4ea28d0338a5 564 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 464 532 4.1E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c01630 89ea43f00d65f0f04f76ee8c3e9840b3 310 Gene3D G3DSA:3.40.50.300 7 144 5.4E-38 T 12-10-2018 CLSA_c01630 89ea43f00d65f0f04f76ee8c3e9840b3 310 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 195 295 7.1E-6 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLSA_c01630 89ea43f00d65f0f04f76ee8c3e9840b3 310 Pfam PF13177 DNA polymerase III, delta subunit 8 149 9.6E-31 T 12-10-2018 CLSA_c01630 89ea43f00d65f0f04f76ee8c3e9840b3 310 SUPERFAMILY SSF52540 19 167 3.69E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 579 597 0.0016 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 701 719 0.29 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 721 739 1.7E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 620 638 0.0026 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 600 618 1.0E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 643 659 0.41 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF01473 Putative cell wall binding repeat 682 699 4.5E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 SUPERFAMILY SSF69360 552 752 6.02E-57 T 12-10-2018 CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF12733 Cadherin-like beta sandwich domain 452 552 1.8E-15 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF12733 Cadherin-like beta sandwich domain 264 344 2.7E-15 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Pfam PF12733 Cadherin-like beta sandwich domain 354 444 8.2E-18 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Gene3D G3DSA:2.10.270.10 491 657 2.4E-21 T 12-10-2018 CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Gene3D G3DSA:2.10.270.10 711 755 2.6E-13 T 12-10-2018 CLSA_c41920 e01f19a7a81e6d5abff27f7b154859c4 756 Gene3D G3DSA:2.10.270.10 658 710 2.5E-14 T 12-10-2018 CLSA_c01870 3f2ba5c15699a2ba63d95f0e8414fc2f 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.6E-20 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01870 3f2ba5c15699a2ba63d95f0e8414fc2f 49 Gene3D G3DSA:2.20.28.120 1 49 6.0E-24 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01870 3f2ba5c15699a2ba63d95f0e8414fc2f 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.708 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c01870 3f2ba5c15699a2ba63d95f0e8414fc2f 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c01870 3f2ba5c15699a2ba63d95f0e8414fc2f 49 SUPERFAMILY SSF57829 1 49 4.03E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CLSA_c01870 3f2ba5c15699a2ba63d95f0e8414fc2f 49 Pfam PF00471 Ribosomal protein L33 4 49 7.2E-23 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 Pfam PF12728 Helix-turn-helix domain 20 68 1.4E-16 T 12-10-2018 CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 20 65 5.6E-15 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 Gene3D G3DSA:3.40.190.10 187 287 1.2E-6 T 12-10-2018 CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 SUPERFAMILY SSF46955 20 67 8.06E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 Gene3D G3DSA:1.10.1660.10 17 68 1.9E-10 T 12-10-2018 CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 Pfam PF12727 PBP superfamily domain 116 306 5.2E-57 T 12-10-2018 IPR024370 PBP domain CLSA_c26370 fd6b6853480657ddf7c7d4bbbf7bca0f 334 SUPERFAMILY SSF53850 122 322 2.58E-17 T 12-10-2018 CLSA_c35830 fe0a62b38f482de594df0e0a3fdf3044 205 Pfam PF06353 Protein of unknown function (DUF1062) 40 175 3.1E-47 T 12-10-2018 IPR009412 Protein of unknown function DUF1062 CLSA_c10170 eb4304c426519fc5935e9fe62a5d6643 164 SMART SM00347 39 142 1.7E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c10170 eb4304c426519fc5935e9fe62a5d6643 164 Gene3D G3DSA:1.10.10.10 11 158 6.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c10170 eb4304c426519fc5935e9fe62a5d6643 164 Pfam PF01047 MarR family 46 104 9.9E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c10170 eb4304c426519fc5935e9fe62a5d6643 164 SUPERFAMILY SSF46785 19 156 6.17E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c25400 8fd0a7934ca1c928559adef0379b3bff 302 SUPERFAMILY SSF56300 11 282 7.6E-40 T 12-10-2018 CLSA_c25400 8fd0a7934ca1c928559adef0379b3bff 302 Pfam PF00149 Calcineurin-like phosphoesterase 13 243 1.8E-18 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c25400 8fd0a7934ca1c928559adef0379b3bff 302 PIRSF PIRSF030250 1 301 1.9E-99 T 12-10-2018 IPR011230 Phosphoesterase At2g46880 CLSA_c25400 8fd0a7934ca1c928559adef0379b3bff 302 Gene3D G3DSA:3.60.21.10 11 291 3.2E-20 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 Gene3D G3DSA:3.20.20.80 1 486 5.1E-145 T 12-10-2018 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 PRINTS PR00131 Glycosyl hydrolase family 1 signature 449 461 1.1E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 390 1.1E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 414 1.1E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 441 1.1E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 PRINTS PR00131 Glycosyl hydrolase family 1 signature 316 330 1.1E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 Pfam PF00232 Glycosyl hydrolase family 1 3 484 8.7E-126 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 SUPERFAMILY SSF51445 2 481 1.79E-153 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c36110 19357b027a545e8e9a61a91d928bdce3 487 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 182 2.0E-28 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 SUPERFAMILY SSF58104 231 568 3.49E-56 T 12-10-2018 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 SMART SM00283 285 568 1.3E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 Gene3D G3DSA:1.20.1480.50 168 270 1.0E-7 T 12-10-2018 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 Gene3D G3DSA:1.10.287.950 276 568 4.4E-53 T 12-10-2018 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 359 520 1.5E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 341 8.3E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 8.3E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 8.3E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35310 6a85a91f7d832aafbb681997cfdd0505 569 SMART SM00304 209 263 5.8E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c42060 05b8fcce7ba1c08624098003b68c0621 338 Gene3D G3DSA:3.90.550.10 2 205 2.7E-51 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42060 05b8fcce7ba1c08624098003b68c0621 338 SUPERFAMILY SSF53448 3 232 2.05E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42060 05b8fcce7ba1c08624098003b68c0621 338 Pfam PF00535 Glycosyl transferase family 2 4 149 4.4E-31 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c23020 c9ea657834883c92e0ab697fed945bf3 235 Gene3D G3DSA:3.10.350.10 189 235 1.3E-6 T 12-10-2018 IPR036779 LysM domain superfamily CLSA_c23020 c9ea657834883c92e0ab697fed945bf3 235 Pfam PF01476 LysM domain 190 235 3.2E-4 T 12-10-2018 IPR018392 LysM domain CLSA_c23020 c9ea657834883c92e0ab697fed945bf3 235 SUPERFAMILY SSF54106 189 235 3.53E-5 T 12-10-2018 CLSA_c28050 47091ea6c4b8ae4b5b34d69caf70192e 874 Gene3D G3DSA:3.40.50.300 49 250 1.6E-22 T 12-10-2018 CLSA_c28050 47091ea6c4b8ae4b5b34d69caf70192e 874 Pfam PF00350 Dynamin family 49 206 2.1E-16 T 12-10-2018 IPR022812 Dynamin superfamily CLSA_c28050 47091ea6c4b8ae4b5b34d69caf70192e 874 SUPERFAMILY SSF52540 41 225 3.43E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c35020 2ec3fe130145712d62b517a9cc188f9a 460 PIRSF PIRSF006603 1 455 2.0E-86 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c35020 2ec3fe130145712d62b517a9cc188f9a 460 Pfam PF01554 MatE 264 406 4.1E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c35020 2ec3fe130145712d62b517a9cc188f9a 460 Pfam PF01554 MatE 23 185 8.8E-29 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c35020 2ec3fe130145712d62b517a9cc188f9a 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 415 8.0E-58 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c05200 598c453517a51cae4bd765018e0869d8 250 Gene3D G3DSA:2.70.70.10 119 250 3.1E-26 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c05200 598c453517a51cae4bd765018e0869d8 250 SUPERFAMILY SSF51261 68 243 1.15E-22 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c05200 598c453517a51cae4bd765018e0869d8 250 Pfam PF01551 Peptidase family M23 140 241 1.6E-18 T 12-10-2018 IPR016047 Peptidase M23 CLSA_c28680 1f42a72bcc011d243eaa04c6d4db239f 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.868 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CLSA_c28680 1f42a72bcc011d243eaa04c6d4db239f 149 SUPERFAMILY SSF69500 1 145 5.23E-57 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CLSA_c28680 1f42a72bcc011d243eaa04c6d4db239f 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.2E-56 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CLSA_c28680 1f42a72bcc011d243eaa04c6d4db239f 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 1.9E-58 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CLSA_c28680 1f42a72bcc011d243eaa04c6d4db239f 149 Gene3D G3DSA:3.50.80.10 1 147 3.1E-60 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CLSA_c07260 59c383e420361e61ba0b654e0d639f41 292 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 4 290 4.0E-105 T 12-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLSA_c07260 59c383e420361e61ba0b654e0d639f41 292 Pfam PF03313 Serine dehydratase alpha chain 16 276 1.1E-69 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 113 127 2.0E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 2.0E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 158 171 2.0E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 Gene3D G3DSA:3.90.120.10 154 347 4.0E-93 T 12-10-2018 CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 Gene3D G3DSA:3.40.50.150 7 352 4.0E-93 T 12-10-2018 CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 SUPERFAMILY SSF53335 4 360 1.04E-83 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 359 7.2E-64 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLSA_c09450 60711b1f2cde82881c1252dfffd7cac5 371 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 358 7.6E-52 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 Gene3D G3DSA:2.170.120.20 96 189 4.4E-20 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 Pfam PF01386 Ribosomal L25p family 4 90 2.0E-19 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 16 93 1.0E-17 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 181 23.029 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 5 178 2.0E-41 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 Gene3D G3DSA:2.40.240.10 3 93 9.4E-20 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 SUPERFAMILY SSF50715 12 179 5.93E-43 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLSA_c12280 b9e706661f026632e4a93a974544c9d7 193 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 179 2.1E-20 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain CLSA_c20290 9fe3632faf04c4c9eec80059d27572df 173 Pfam PF03551 Transcriptional regulator PadR-like family 6 80 6.7E-11 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c20290 9fe3632faf04c4c9eec80059d27572df 173 Gene3D G3DSA:1.10.10.10 1 96 7.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c20290 9fe3632faf04c4c9eec80059d27572df 173 SUPERFAMILY SSF46785 3 170 2.24E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c13250 b1fe234f726db0b7095d6574fe5740b8 166 SUPERFAMILY SSF50346 2 68 5.1E-9 T 12-10-2018 IPR011033 PRC-barrel-like superfamily CLSA_c13250 b1fe234f726db0b7095d6574fe5740b8 166 SUPERFAMILY SSF50346 77 133 4.97E-7 T 12-10-2018 IPR011033 PRC-barrel-like superfamily CLSA_c13250 b1fe234f726db0b7095d6574fe5740b8 166 Pfam PF05239 PRC-barrel domain 74 128 3.8E-5 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c13250 b1fe234f726db0b7095d6574fe5740b8 166 Pfam PF05239 PRC-barrel domain 2 72 1.0E-9 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c21040 daf21df9e8e2d95740d6a5801b93e11d 417 Pfam PF13641 Glycosyltransferase like family 2 49 279 2.8E-35 T 12-10-2018 CLSA_c21040 daf21df9e8e2d95740d6a5801b93e11d 417 Gene3D G3DSA:3.90.550.10 40 265 6.4E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c21040 daf21df9e8e2d95740d6a5801b93e11d 417 SUPERFAMILY SSF53448 46 317 4.02E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c16450 c4808404f36aefc47f370c3a9d0fa22b 175 SUPERFAMILY SSF52218 1 169 2.1E-11 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c16450 c4808404f36aefc47f370c3a9d0fa22b 175 Pfam PF12641 Flavodoxin domain 6 165 3.9E-34 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c16450 c4808404f36aefc47f370c3a9d0fa22b 175 Gene3D G3DSA:3.40.50.360 4 111 2.5E-8 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c40190 8e1803e755c7311099479b7a0b69e9af 196 Gene3D G3DSA:1.10.1760.20 8 196 2.3E-60 T 12-10-2018 CLSA_c40190 8e1803e755c7311099479b7a0b69e9af 196 Pfam PF12822 ECF transporter, substrate-specific component 13 188 4.9E-34 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLSA_c06630 fb7d4966855eccb17b27eda1ad880c82 57 Pfam PF14020 Protein of unknown function (DUF4236) 4 51 6.9E-13 T 12-10-2018 IPR025330 Domain of unknown function DUF4236 CLSA_c01220 f0f252af19ef550ce1a64840404ad3ca 130 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 13 89 2.2E-18 T 12-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like CLSA_c01220 f0f252af19ef550ce1a64840404ad3ca 130 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 5 121 3.1E-28 T 12-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ CLSA_c35920 ea58e17bbfd8614146cefbfe35ba7855 190 Pfam PF00857 Isochorismatase family 13 179 4.1E-32 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 CLSA_c35920 ea58e17bbfd8614146cefbfe35ba7855 190 Gene3D G3DSA:3.40.50.850 8 189 5.4E-45 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c35920 ea58e17bbfd8614146cefbfe35ba7855 190 SUPERFAMILY SSF52499 11 185 5.36E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 SUPERFAMILY SSF55681 68 257 4.62E-55 T 12-10-2018 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 320 32.462 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 Pfam PF03099 Biotin/lipoate A/B protein ligase family 86 207 4.1E-17 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 Gene3D G3DSA:3.30.930.10 63 265 5.2E-59 T 12-10-2018 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 Gene3D G3DSA:1.10.10.10 1 60 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 7.6E-58 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 Pfam PF08279 HTH domain 3 55 1.3E-16 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 CLSA_c12590 e4f674304138f10d14872401c6c3976b 324 SUPERFAMILY SSF46785 4 57 1.38E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c11720 8910028af4e9e8abaf47146429521967 95 Gene3D G3DSA:3.30.70.100 1 95 4.3E-33 T 12-10-2018 CLSA_c11720 8910028af4e9e8abaf47146429521967 95 SUPERFAMILY SSF54909 1 86 1.76E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c11720 8910028af4e9e8abaf47146429521967 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 5.0E-21 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CLSA_c11820 40e2c54c5e0271085c041ac420630350 64 ProSitePatterns PS00022 EGF-like domain signature 1. 3 14 - T 12-10-2018 IPR013032 EGF-like, conserved site CLSA_c02090 d8b7a7ee174782d91aab21e3c16ba9e5 70 ProSitePatterns PS00579 Ribosomal protein L29 signature. 42 56 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02090 d8b7a7ee174782d91aab21e3c16ba9e5 70 SUPERFAMILY SSF46561 5 65 9.81E-22 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02090 d8b7a7ee174782d91aab21e3c16ba9e5 70 Gene3D G3DSA:1.10.287.310 1 69 1.1E-25 T 12-10-2018 CLSA_c02090 d8b7a7ee174782d91aab21e3c16ba9e5 70 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 63 17.468 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02090 d8b7a7ee174782d91aab21e3c16ba9e5 70 Pfam PF00831 Ribosomal L29 protein 7 62 1.0E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02090 d8b7a7ee174782d91aab21e3c16ba9e5 70 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 63 2.9E-24 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c18820 a85231201b3941a5cef267b97885c00a 210 Gene3D G3DSA:3.40.50.150 25 188 9.3E-10 T 12-10-2018 CLSA_c18820 a85231201b3941a5cef267b97885c00a 210 SUPERFAMILY SSF53335 21 144 3.77E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c18820 a85231201b3941a5cef267b97885c00a 210 Pfam PF13679 Methyltransferase domain 46 106 4.7E-7 T 12-10-2018 IPR025714 Methyltransferase domain CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 Pfam PF07664 Ferrous iron transport protein B C terminus 458 510 2.8E-21 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 Pfam PF07670 Nucleoside recognition 515 644 7.1E-27 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 Pfam PF07670 Nucleoside recognition 354 448 4.2E-12 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 154 4.1E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 Gene3D G3DSA:3.40.50.300 3 192 1.4E-43 T 12-10-2018 CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 Pfam PF02421 Ferrous iron transport protein B 4 156 4.3E-67 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 SUPERFAMILY SSF52540 3 164 7.1E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c39010 ae019eab3eac55a7cc292b211a508e15 715 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 640 2.6E-181 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 Pfam PF01144 Coenzyme A transferase 8 241 3.5E-32 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 SUPERFAMILY SSF100950 5 249 9.54E-81 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 SUPERFAMILY SSF100950 274 514 2.43E-82 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 Gene3D G3DSA:3.40.1080.10 273 516 1.0E-110 T 12-10-2018 CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 Gene3D G3DSA:3.40.1080.10 1 266 2.1E-99 T 12-10-2018 CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 SMART SM00882 4 241 1.2E-60 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 SMART SM00882 279 487 1.2E-4 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CLSA_c24740 8158b1926af74b2da1a658bca257ec7f 516 PIRSF PIRSF000858 1 516 3.8E-220 T 12-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 Pfam PF13575 Domain of unknown function (DUF4135) 190 564 2.5E-103 T 12-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 Pfam PF05147 Lanthionine synthetase C-like protein 687 1034 1.6E-71 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 TIGRFAM TIGR03897 lanti_2_LanM: type 2 lantibiotic biosynthesis protein LanM 99 1027 9.9E-267 T 12-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PRINTS PR01950 LanC-like protein superfamily signature 847 863 9.1E-18 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PRINTS PR01950 LanC-like protein superfamily signature 905 925 9.1E-18 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PRINTS PR01950 LanC-like protein superfamily signature 689 707 9.1E-18 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PRINTS PR01950 LanC-like protein superfamily signature 787 802 9.1E-18 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PRINTS PR01950 LanC-like protein superfamily signature 952 965 9.1E-18 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PRINTS PR01950 LanC-like protein superfamily signature 1007 1024 9.1E-18 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 SUPERFAMILY SSF158745 671 1034 1.7E-76 T 12-10-2018 CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 Gene3D G3DSA:1.50.10.10 676 1031 1.9E-50 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 SMART SM01260 686 1035 2.7E-77 T 12-10-2018 IPR007822 Lanthionine synthetase C-like CLSA_c44530 2b1bf83446e77dc934b9993716210bd5 1037 PIRSF PIRSF037228 36 1037 1.9E-220 T 12-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM CLSA_c40670 f4f632177d5ec325511863332f456f55 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 380 632 4.5E-87 T 12-10-2018 IPR010650 PrkA C-terminal domain CLSA_c40670 f4f632177d5ec325511863332f456f55 640 SUPERFAMILY SSF52540 71 449 9.73E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40670 f4f632177d5ec325511863332f456f55 640 PIRSF PIRSF000549 1 640 6.3E-265 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CLSA_c40670 f4f632177d5ec325511863332f456f55 640 Gene3D G3DSA:3.40.50.300 82 328 1.7E-5 T 12-10-2018 CLSA_c40670 f4f632177d5ec325511863332f456f55 640 Pfam PF08298 PrkA AAA domain 22 378 1.4E-170 T 12-10-2018 IPR013153 PrkA AAA domain CLSA_c40670 f4f632177d5ec325511863332f456f55 640 SMART SM00763 21 378 3.8E-189 T 12-10-2018 IPR013153 PrkA AAA domain CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 299 7.7E-102 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 PIRSF PIRSF000535 1 301 4.4E-76 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 299 9.1E-100 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 SUPERFAMILY SSF53613 1 297 1.18E-61 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 Pfam PF00294 pfkB family carbohydrate kinase 13 286 2.8E-46 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLSA_c22150 4a4d64953932e9b85df184e356db761f 301 Gene3D G3DSA:3.40.1190.20 1 301 6.0E-98 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c33150 1b77e778304c6243929493bdcfe988a9 194 SUPERFAMILY SSF48317 25 190 1.57E-40 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLSA_c33150 1b77e778304c6243929493bdcfe988a9 194 SMART SM00014 77 187 4.0E-30 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c33150 1b77e778304c6243929493bdcfe988a9 194 Pfam PF01569 PAP2 superfamily 81 192 4.0E-26 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c33150 1b77e778304c6243929493bdcfe988a9 194 Gene3D G3DSA:1.20.144.10 107 194 1.7E-22 T 12-10-2018 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Gene3D G3DSA:3.10.450.100 33 145 8.7E-17 T 12-10-2018 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 SUPERFAMILY SSF56601 340 674 4.88E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Pfam PF00905 Penicillin binding protein transpeptidase domain 357 671 2.2E-71 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Pfam PF03717 Penicillin-binding Protein dimerisation domain 158 322 2.4E-32 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 SUPERFAMILY SSF54427 39 148 1.58E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 36 148 4.8E-20 T 12-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Gene3D G3DSA:3.30.1390.30 178 250 2.7E-49 T 12-10-2018 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 SUPERFAMILY SSF56519 152 339 1.83E-39 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Gene3D G3DSA:3.90.1310.10 158 335 2.7E-49 T 12-10-2018 CLSA_c26160 87608e2b4c5be44445343e1b9f0aeba4 677 Gene3D G3DSA:3.40.710.10 339 677 7.1E-88 T 12-10-2018 CLSA_c07970 789b5986eba36067dfabc8bee81d6abc 217 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 93 204 6.5E-23 T 12-10-2018 IPR032871 AHH domain-containing protein CLSA_c07970 789b5986eba36067dfabc8bee81d6abc 217 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2 42 5.0E-14 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c07970 789b5986eba36067dfabc8bee81d6abc 217 Gene3D G3DSA:2.180.10.10 1 42 1.1E-11 T 12-10-2018 CLSA_c16910 c8a7b6b76b9843e2bf5a996fa773a353 226 SUPERFAMILY SSF56214 25 118 2.46E-20 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c16910 c8a7b6b76b9843e2bf5a996fa773a353 226 Gene3D G3DSA:3.90.470.20 22 160 3.9E-28 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c16910 c8a7b6b76b9843e2bf5a996fa773a353 226 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 127 189 1.4E-10 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c16910 c8a7b6b76b9843e2bf5a996fa773a353 226 SUPERFAMILY SSF56214 126 223 1.36E-17 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c16910 c8a7b6b76b9843e2bf5a996fa773a353 226 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 134 194 0.005 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 SUPERFAMILY SSF53784 2 387 1.44E-99 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 6.8E-13 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 6.8E-13 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 6.8E-13 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 232 244 6.8E-13 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 101 117 6.8E-13 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 Gene3D G3DSA:3.40.50.450 3 396 5.1E-140 T 12-10-2018 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 Pfam PF00365 Phosphofructokinase 6 304 3.9E-53 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 Gene3D G3DSA:3.40.50.460 139 385 5.1E-140 T 12-10-2018 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 397 42.785 T 12-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 CLSA_c40070 8dc7c5fd54326d6189be04df19049a71 405 PIRSF PIRSF036483 1 405 1.4E-156 T 12-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 CLSA_c41010 65be31eecabefdadaa48695c62d7edf6 263 SMART SM00954 45 166 4.8E-37 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 CLSA_c41010 65be31eecabefdadaa48695c62d7edf6 263 Pfam PF04607 Region found in RelA / SpoT proteins 45 163 1.2E-32 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 CLSA_c41010 65be31eecabefdadaa48695c62d7edf6 263 SUPERFAMILY SSF81301 5 199 2.53E-56 T 12-10-2018 CLSA_c41010 65be31eecabefdadaa48695c62d7edf6 263 Gene3D G3DSA:3.30.460.10 1 147 8.8E-49 T 12-10-2018 CLSA_c41010 65be31eecabefdadaa48695c62d7edf6 263 Gene3D G3DSA:1.10.287.860 149 210 4.4E-25 T 12-10-2018 CLSA_c24880 2bd0d498792d03d6745f6150481f0118 216 Pfam PF01473 Putative cell wall binding repeat 178 196 2.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c24880 2bd0d498792d03d6745f6150481f0118 216 SUPERFAMILY SSF69360 84 214 1.28E-9 T 12-10-2018 CLSA_c24880 2bd0d498792d03d6745f6150481f0118 216 Gene3D G3DSA:2.10.270.10 139 216 1.7E-8 T 12-10-2018 CLSA_c45350 2ab9825a400cdcb891a86327b02e57ba 65 PIRSF PIRSF037263 2 65 1.3E-32 T 12-10-2018 IPR009296 Protein of unknown function DUF951 CLSA_c45350 2ab9825a400cdcb891a86327b02e57ba 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 5 59 3.3E-31 T 12-10-2018 IPR009296 Protein of unknown function DUF951 CLSA_c23820 b78636b007f313f32056e5fee6e79f6d 60 SUPERFAMILY SSF140683 1 60 1.31E-16 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily CLSA_c23820 b78636b007f313f32056e5fee6e79f6d 60 Gene3D G3DSA:1.10.3910.10 1 60 9.2E-25 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily CLSA_c23820 b78636b007f313f32056e5fee6e79f6d 60 Pfam PF08984 Domain of unknown function (DUF1858) 2 55 4.7E-21 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 CLSA_c23820 b78636b007f313f32056e5fee6e79f6d 60 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 2 59 3.9E-27 T 12-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 Pfam PF02629 CoA binding domain 86 180 1.3E-23 T 12-10-2018 IPR003781 CoA-binding GO:0048037 CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 Pfam PF06971 Putative DNA-binding protein N-terminus 6 54 4.5E-21 T 12-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 SUPERFAMILY SSF46785 10 80 1.77E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 SMART SM00881 80 181 1.7E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 Gene3D G3DSA:3.40.50.720 78 211 4.1E-46 T 12-10-2018 CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 36.437 T 12-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 Gene3D G3DSA:1.10.10.10 1 77 7.5E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c03550 d66b99a26f4f09e214a2a1cfbfa358f6 211 SUPERFAMILY SSF51735 84 207 3.66E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c05210 1a109b041b3647d7109eb6f0fad4f6dc 84 Pfam PF12116 Stage III sporulation protein D 2 81 1.1E-42 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLSA_c05210 1a109b041b3647d7109eb6f0fad4f6dc 84 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 2.8E-47 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLSA_c05210 1a109b041b3647d7109eb6f0fad4f6dc 84 Gene3D G3DSA:1.10.10.60 1 84 1.3E-38 T 12-10-2018 CLSA_c05210 1a109b041b3647d7109eb6f0fad4f6dc 84 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c32280 e3086eac30dd4b5e61916e677fde695b 430 SUPERFAMILY SSF89372 153 358 2.03E-47 T 12-10-2018 CLSA_c32280 e3086eac30dd4b5e61916e677fde695b 430 Gene3D G3DSA:2.120.10.70 265 429 4.7E-9 T 12-10-2018 CLSA_c32280 e3086eac30dd4b5e61916e677fde695b 430 Pfam PF03984 Repeat of unknown function (DUF346) 281 315 2.9E-9 T 12-10-2018 IPR007132 Protein of unknown function DUF346 CLSA_c32280 e3086eac30dd4b5e61916e677fde695b 430 Pfam PF03984 Repeat of unknown function (DUF346) 191 225 7.6E-9 T 12-10-2018 IPR007132 Protein of unknown function DUF346 CLSA_c32280 e3086eac30dd4b5e61916e677fde695b 430 Pfam PF03984 Repeat of unknown function (DUF346) 235 270 3.4E-9 T 12-10-2018 IPR007132 Protein of unknown function DUF346 CLSA_c32280 e3086eac30dd4b5e61916e677fde695b 430 Pfam PF03984 Repeat of unknown function (DUF346) 325 360 3.5E-7 T 12-10-2018 IPR007132 Protein of unknown function DUF346 CLSA_c27540 429f0f6e6edf8336181c6d36a85107c8 105 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 103 28.998 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CLSA_c27540 429f0f6e6edf8336181c6d36a85107c8 105 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 1.4E-39 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CLSA_c27540 429f0f6e6edf8336181c6d36a85107c8 105 Gene3D G3DSA:2.60.120.10 1 103 2.5E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c27540 429f0f6e6edf8336181c6d36a85107c8 105 SUPERFAMILY SSF51182 10 103 9.98E-37 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c38370 9a88defe7a1caeb75c412d6986f56f2f 271 SUPERFAMILY SSF52518 8 267 8.63E-92 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold CLSA_c38370 9a88defe7a1caeb75c412d6986f56f2f 271 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 18 263 5.8E-64 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLSA_c38370 9a88defe7a1caeb75c412d6986f56f2f 271 Gene3D G3DSA:3.40.50.970 1 271 1.3E-111 T 12-10-2018 CLSA_c00860 164f753587a62184247e6ee76c002be6 702 SUPERFAMILY SSF51998 115 676 1.46E-163 T 12-10-2018 CLSA_c00860 164f753587a62184247e6ee76c002be6 702 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 114 694 5.7E-185 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLSA_c00860 164f753587a62184247e6ee76c002be6 702 Gene3D G3DSA:3.20.70.20 120 677 1.2E-193 T 12-10-2018 CLSA_c00860 164f753587a62184247e6ee76c002be6 702 Pfam PF03477 ATP cone domain 3 91 1.1E-17 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CLSA_c00860 164f753587a62184247e6ee76c002be6 702 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 114 694 6.1E-202 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 Pfam PF08323 Starch synthase catalytic domain 2 237 2.3E-81 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 45.113 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 3.5E-174 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 Gene3D G3DSA:3.40.50.2000 251 459 2.4E-182 T 12-10-2018 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 Pfam PF00534 Glycosyl transferases group 1 291 449 3.8E-16 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 SUPERFAMILY SSF53756 3 477 1.54E-130 T 12-10-2018 CLSA_c43810 ddadfa192b84dd0caf8a19d6a57126d4 479 Gene3D G3DSA:3.40.50.2000 3 473 2.4E-182 T 12-10-2018 CLSA_c25480 d90fa5bf3f12914fcaf019e77da25d17 210 Pfam PF03358 NADPH-dependent FMN reductase 1 155 3.8E-34 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c25480 d90fa5bf3f12914fcaf019e77da25d17 210 SUPERFAMILY SSF52218 1 188 8.38E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c25480 d90fa5bf3f12914fcaf019e77da25d17 210 Gene3D G3DSA:3.40.50.360 1 208 4.6E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c12260 04bec4b3fbcacd0b867a833496797a06 1164 Gene3D G3DSA:3.40.50.300 863 1162 2.6E-25 T 12-10-2018 CLSA_c12260 04bec4b3fbcacd0b867a833496797a06 1164 Gene3D G3DSA:3.40.50.300 1 288 1.8E-42 T 12-10-2018 CLSA_c12260 04bec4b3fbcacd0b867a833496797a06 1164 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1054 1119 2.1E-13 T 12-10-2018 CLSA_c12260 04bec4b3fbcacd0b867a833496797a06 1164 Pfam PF13476 AAA domain 5 279 2.6E-20 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain CLSA_c12260 04bec4b3fbcacd0b867a833496797a06 1164 SUPERFAMILY SSF52540 917 1148 4.14E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c12260 04bec4b3fbcacd0b867a833496797a06 1164 SUPERFAMILY SSF52540 6 1136 1.55E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c44200 b8618c660a3e6dc4a9ad973bdbdafcbf 370 Pfam PF01098 Cell cycle protein 18 365 3.0E-93 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c44200 b8618c660a3e6dc4a9ad973bdbdafcbf 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 15 365 3.2E-108 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c44200 b8618c660a3e6dc4a9ad973bdbdafcbf 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 323 347 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c34990 0613fa7ff45a9c9d6647b426a76372fa 271 SUPERFAMILY SSF58104 106 261 1.7E-37 T 12-10-2018 CLSA_c34990 0613fa7ff45a9c9d6647b426a76372fa 271 Gene3D G3DSA:1.10.287.950 89 271 4.3E-35 T 12-10-2018 CLSA_c34990 0613fa7ff45a9c9d6647b426a76372fa 271 SMART SM00283 76 271 3.4E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c34990 0613fa7ff45a9c9d6647b426a76372fa 271 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 146 261 2.6E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c20840 c6dc9ab2641ff5367948b648194c9291 389 Gene3D G3DSA:3.40.640.10 44 283 1.5E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c20840 c6dc9ab2641ff5367948b648194c9291 389 SUPERFAMILY SSF53383 4 384 6.32E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c20840 c6dc9ab2641ff5367948b648194c9291 389 Gene3D G3DSA:3.90.1150.10 24 382 1.5E-106 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c20840 c6dc9ab2641ff5367948b648194c9291 389 Pfam PF00155 Aminotransferase class I and II 33 382 2.2E-55 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLSA_c31000 84b8638e583e789c05c2edaf731602fa 184 SUPERFAMILY SSF53335 49 156 8.07E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c31000 84b8638e583e789c05c2edaf731602fa 184 Gene3D G3DSA:3.40.50.150 14 174 1.6E-5 T 12-10-2018 CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 Pfam PF01841 Transglutaminase-like superfamily 185 276 1.1E-11 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 SUPERFAMILY SSF69360 24 86 1.57E-14 T 12-10-2018 CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 Gene3D G3DSA:2.10.270.10 24 86 6.2E-12 T 12-10-2018 CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 SMART SM00460 223 279 6.2E-9 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 Pfam PF01473 Putative cell wall binding repeat 49 67 3.3E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 SUPERFAMILY SSF54001 174 288 1.4E-22 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c34740 aa1498f7da53b62a66d231b14bc332ce 316 Gene3D G3DSA:3.10.620.30 142 299 2.1E-16 T 12-10-2018 CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 Gene3D G3DSA:3.60.110.10 1 305 2.4E-76 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 Pfam PF00795 Carbon-nitrogen hydrolase 5 266 3.6E-15 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 632 28.533 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 SUPERFAMILY SSF56317 1 282 2.35E-46 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 Gene3D G3DSA:3.40.50.620 310 524 1.1E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 TIGRFAM TIGR00552 nadE: NAD+ synthetase 337 503 1.2E-25 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 Pfam PF02540 NAD synthase 335 565 8.7E-31 T 12-10-2018 IPR022310 NAD/GMP synthase CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 Gene3D G3DSA:1.10.10.1140 540 631 1.3E-39 T 12-10-2018 CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 SUPERFAMILY SSF52402 311 614 1.1E-71 T 12-10-2018 CLSA_c12880 6602bd8748265bd8ea2280d455e4b630 632 PIRSF PIRSF006630 1 630 2.7E-168 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CLSA_c14860 478376a90f5927549da536de77857dc3 251 Gene3D G3DSA:3.30.420.10 1 228 5.7E-42 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c14860 478376a90f5927549da536de77857dc3 251 Pfam PF00929 Exonuclease 29 180 7.1E-13 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c14860 478376a90f5927549da536de77857dc3 251 SMART SM00479 2 189 7.8E-14 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c14860 478376a90f5927549da536de77857dc3 251 SUPERFAMILY SSF53098 1 210 2.62E-29 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 SUPERFAMILY SSF51735 41 285 1.11E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 Gene3D G3DSA:3.40.50.720 3 286 1.4E-87 T 12-10-2018 CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 7.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 7.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 7.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 7.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 7.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 248 268 7.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 283 3.5E-63 T 12-10-2018 CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 6.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 6.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c17460 e033260c98645e7f2e1b16554a0c0fe5 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 6.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CLSA_c12440 3788976b9a18a8a63c2cc638de3189e1 258 Gene3D G3DSA:3.40.710.10 1 256 1.2E-54 T 12-10-2018 CLSA_c12440 3788976b9a18a8a63c2cc638de3189e1 258 Pfam PF13354 Beta-lactamase enzyme family 27 228 1.6E-48 T 12-10-2018 CLSA_c12440 3788976b9a18a8a63c2cc638de3189e1 258 SUPERFAMILY SSF56601 1 238 2.82E-41 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c06540 02c4757eb0844c15f933073b441db7f7 97 Gene3D G3DSA:1.10.443.10 1 97 3.0E-19 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c06540 02c4757eb0844c15f933073b441db7f7 97 SUPERFAMILY SSF56349 7 96 2.56E-13 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c35390 94173474f4ed2ad02923a9add342de6b 205 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 29 176 3.6E-41 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 CLSA_c39660 4c61117b95ce1e9d53d0a63f6cba6cac 124 TIGRFAM TIGR00208 fliS: flagellar protein FliS 3 120 2.9E-27 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 CLSA_c39660 4c61117b95ce1e9d53d0a63f6cba6cac 124 PIRSF PIRSF039090 1 124 7.1E-34 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 CLSA_c39660 4c61117b95ce1e9d53d0a63f6cba6cac 124 Pfam PF02561 Flagellar protein FliS 6 118 1.2E-35 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 CLSA_c39660 4c61117b95ce1e9d53d0a63f6cba6cac 124 Gene3D G3DSA:1.20.120.340 1 122 2.0E-36 T 12-10-2018 CLSA_c39660 4c61117b95ce1e9d53d0a63f6cba6cac 124 SUPERFAMILY SSF101116 4 121 1.7E-34 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 CLSA_c42300 8a86f48bae2a2349f29c79636257bc9f 478 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 332 464 3.7E-19 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c42300 8a86f48bae2a2349f29c79636257bc9f 478 Pfam PF01943 Polysaccharide biosynthesis protein 9 276 7.6E-34 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 SMART SM00400 34 88 1.7E-35 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 246 3.0E-41 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 SUPERFAMILY SSF56731 112 418 1.44E-98 T 12-10-2018 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Pfam PF01807 CHC2 zinc finger 4 97 1.8E-38 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Gene3D G3DSA:3.90.580.10 1 100 2.5E-40 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Gene3D G3DSA:3.40.1360.10 236 359 7.2E-41 T 12-10-2018 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Pfam PF10410 DnaB-helicase binding domain of primase 361 414 5.3E-8 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 SUPERFAMILY SSF57783 2 96 6.63E-36 T 12-10-2018 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Gene3D G3DSA:3.90.980.10 106 235 3.8E-45 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Pfam PF13155 Toprim-like 257 341 7.6E-23 T 12-10-2018 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 PIRSF PIRSF002811 1 588 9.5E-164 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 SMART SM00493 254 325 6.4E-18 T 12-10-2018 IPR006171 TOPRIM domain CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 Hamap MF_00974 DNA primase [dnaG]. 2 578 27.95 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CLSA_c11070 49d6dcf537820fc364f875eff9a04274 593 TIGRFAM TIGR01391 dnaG: DNA primase 3 409 2.8E-144 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CLSA_c15830 a87bdd50c4b362588b9652ed33e9e518 203 Pfam PF02698 DUF218 domain 26 151 9.8E-15 T 12-10-2018 IPR003848 Domain of unknown function DUF218 CLSA_c15830 a87bdd50c4b362588b9652ed33e9e518 203 Gene3D G3DSA:3.40.50.620 17 162 1.3E-5 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 16 82 3.0E-17 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 SUPERFAMILY SSF56014 96 282 1.44E-36 T 12-10-2018 CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 Gene3D G3DSA:3.30.70.3340 14 91 7.4E-9 T 12-10-2018 CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 SUPERFAMILY SSF54862 138 214 7.86E-18 T 12-10-2018 CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 SUPERFAMILY SSF55124 9 93 1.32E-19 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 Pfam PF12838 4Fe-4S dicluster domain 164 208 2.8E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 102 283 3.4E-29 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLSA_c22080 d8bd6d6aeec72eb9b9f8ae134184f567 285 Gene3D G3DSA:3.30.70.20 153 215 9.9E-13 T 12-10-2018 CLSA_c36930 e8c5d69f352e2dbb41ef79897d3ad2d8 61 Pfam PF11188 Protein of unknown function (DUF2975) 24 61 2.5E-9 T 12-10-2018 IPR021354 Protein of unknown function DUF2975 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 72 260 1.8E-28 T 12-10-2018 IPR000477 Reverse transcriptase domain CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 SUPERFAMILY SSF56672 35 261 2.22E-14 T 12-10-2018 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 175 188 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 261 267 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 128 146 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 81 93 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 208 219 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 67 80 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c20910 6193db9745da52c64c78c4fadc8b6bd6 374 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 112 126 1.8E-31 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c43540 a4fbe1158036b57c08ca1c8a8b0cb448 624 PIRSF PIRSF005091 7 623 1.3E-143 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like CLSA_c43540 a4fbe1158036b57c08ca1c8a8b0cb448 624 SUPERFAMILY SSF53649 271 581 6.25E-52 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CLSA_c43540 a4fbe1158036b57c08ca1c8a8b0cb448 624 Pfam PF00884 Sulfatase 273 560 3.4E-33 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CLSA_c43540 a4fbe1158036b57c08ca1c8a8b0cb448 624 Gene3D G3DSA:3.40.720.10 265 568 2.5E-63 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Pfam PF00994 Probable molybdopterin binding domain 183 318 4.7E-25 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 SUPERFAMILY SSF53218 179 321 7.2E-36 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 SUPERFAMILY SSF63867 331 401 7.72E-13 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Gene3D G3DSA:2.40.340.10 331 396 7.4E-111 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Gene3D G3DSA:2.170.190.11 47 143 7.4E-111 T 12-10-2018 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 SUPERFAMILY SSF63882 5 175 2.88E-50 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Gene3D G3DSA:3.90.105.10 25 176 7.4E-111 T 12-10-2018 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 SMART SM00852 182 320 1.9E-32 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 169 3.7E-39 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Pfam PF03454 MoeA C-terminal region (domain IV) 336 401 8.9E-12 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 Gene3D G3DSA:3.40.980.10 177 330 7.4E-111 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c26470 ae77a5d0523a3a6e041a42f9e288d8c2 401 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 316 6.5E-27 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c08060 e5a39514c03915475620b98b6bba3443 166 SUPERFAMILY SSF49879 50 157 2.3E-15 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CLSA_c08060 e5a39514c03915475620b98b6bba3443 166 Pfam PF00498 FHA domain 80 146 5.1E-6 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLSA_c08060 e5a39514c03915475620b98b6bba3443 166 Gene3D G3DSA:2.60.200.20 30 154 1.3E-14 T 12-10-2018 CLSA_c26850 4f36cfd910f9a192d1b2b86db0ad5bf7 289 Pfam PF00348 Polyprenyl synthetase 26 259 8.7E-54 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CLSA_c26850 4f36cfd910f9a192d1b2b86db0ad5bf7 289 Gene3D G3DSA:1.10.600.10 1 289 7.3E-101 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily CLSA_c26850 4f36cfd910f9a192d1b2b86db0ad5bf7 289 SUPERFAMILY SSF48576 5 270 2.26E-80 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily CLSA_c26850 4f36cfd910f9a192d1b2b86db0ad5bf7 289 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site CLSA_c26850 4f36cfd910f9a192d1b2b86db0ad5bf7 289 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 93 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site CLSA_c12380 c4e2367dbc7117b86b20c629209e9eef 295 Pfam PF01522 Polysaccharide deacetylase 101 224 4.1E-31 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c12380 c4e2367dbc7117b86b20c629209e9eef 295 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 69 292 8.6E-97 T 12-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA CLSA_c12380 c4e2367dbc7117b86b20c629209e9eef 295 Gene3D G3DSA:3.20.20.370 57 294 8.3E-72 T 12-10-2018 CLSA_c12380 c4e2367dbc7117b86b20c629209e9eef 295 SUPERFAMILY SSF88713 95 292 1.05E-57 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c33380 a6844bbebdc17f6daf083dd1ac77db36 283 Pfam PF13739 Domain of unknown function (DUF4163) 91 166 2.1E-7 T 12-10-2018 IPR025303 Deacetylase PdaC CLSA_c33380 a6844bbebdc17f6daf083dd1ac77db36 283 Gene3D G3DSA:3.30.565.40 73 184 2.6E-12 T 12-10-2018 CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 Gene3D G3DSA:3.80.30.20 300 538 1.6E-8 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 Pfam PF11842 Domain of unknown function (DUF3362) 519 656 2.5E-33 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 Pfam PF04055 Radical SAM superfamily 305 479 6.1E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 Pfam PF08497 Radical SAM N-terminal 7 303 1.8E-133 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 7 565 1.9E-266 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 7 566 52.529 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 SUPERFAMILY SSF102114 300 572 3.14E-10 T 12-10-2018 CLSA_c40570 54f716d4833bef3e21d4637f7b7636f6 674 SMART SM00729 300 551 5.7E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 Gene3D G3DSA:1.20.58.220 442 536 5.4E-15 T 12-10-2018 IPR038078 PhoU-like domain superfamily CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 Pfam PF01895 PhoU domain 342 426 4.0E-14 T 12-10-2018 IPR026022 PhoU domain CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 Pfam PF01895 PhoU domain 446 531 5.2E-10 T 12-10-2018 IPR026022 PhoU domain CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 SUPERFAMILY SSF109755 322 534 1.15E-49 T 12-10-2018 CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 309 1.0E-75 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 Gene3D G3DSA:1.20.58.220 334 438 5.3E-18 T 12-10-2018 IPR038078 PhoU-like domain superfamily CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 Pfam PF02690 Na+/Pi-cotransporter 146 256 2.5E-14 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CLSA_c25830 32f3a21aaebdc9dc9eefa771feada215 537 Pfam PF02690 Na+/Pi-cotransporter 16 151 2.5E-52 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CLSA_c18950 2644de8de0010c5240466a2480fe5f66 599 SMART SM00060 50 153 0.0022 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 CLSA_c18950 2644de8de0010c5240466a2480fe5f66 599 Pfam PF00295 Glycosyl hydrolases family 28 256 492 2.5E-16 T 12-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CLSA_c18950 2644de8de0010c5240466a2480fe5f66 599 Gene3D G3DSA:2.160.20.10 166 599 3.4E-103 T 12-10-2018 IPR012334 Pectin lyase fold CLSA_c18950 2644de8de0010c5240466a2480fe5f66 599 SUPERFAMILY SSF49265 58 165 1.8E-8 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 CLSA_c18950 2644de8de0010c5240466a2480fe5f66 599 SUPERFAMILY SSF51126 175 588 1.48E-57 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c18950 2644de8de0010c5240466a2480fe5f66 599 Gene3D G3DSA:2.60.40.10 52 164 1.4E-25 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c05660 9c70608fb11b291a8a9d827adb3a2f60 215 Gene3D G3DSA:3.40.50.360 3 214 2.9E-5 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c05660 9c70608fb11b291a8a9d827adb3a2f60 215 SUPERFAMILY SSF52218 1 88 2.79E-8 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c30130 0cf0dd3df28101224a6d61febf359010 226 Pfam PF02732 ERCC4 domain 22 180 1.3E-4 T 12-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 CLSA_c30130 0cf0dd3df28101224a6d61febf359010 226 SUPERFAMILY SSF52980 16 91 3.22E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLSA_c20990 b3510ea060a739207103739b121eb839 229 Pfam PF00005 ABC transporter 23 169 1.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c20990 b3510ea060a739207103739b121eb839 229 SMART SM00382 32 218 7.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c20990 b3510ea060a739207103739b121eb839 229 SUPERFAMILY SSF52540 4 223 2.35E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20990 b3510ea060a739207103739b121eb839 229 Gene3D G3DSA:3.40.50.300 2 228 1.1E-66 T 12-10-2018 CLSA_c20990 b3510ea060a739207103739b121eb839 229 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c13920 a78f47484dbc62a74dbd1f993c4e6f56 342 Pfam PF04055 Radical SAM superfamily 12 172 5.1E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c13920 a78f47484dbc62a74dbd1f993c4e6f56 342 Pfam PF13394 4Fe-4S single cluster domain 11 99 1.8E-5 T 12-10-2018 CLSA_c13920 a78f47484dbc62a74dbd1f993c4e6f56 342 Pfam PF16199 Radical_SAM C-terminal domain 186 270 1.1E-18 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CLSA_c13920 a78f47484dbc62a74dbd1f993c4e6f56 342 Gene3D G3DSA:3.80.30.20 8 245 3.6E-24 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c13920 a78f47484dbc62a74dbd1f993c4e6f56 342 SMART SM00729 7 225 9.6E-32 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c13920 a78f47484dbc62a74dbd1f993c4e6f56 342 SUPERFAMILY SSF102114 10 270 2.22E-51 T 12-10-2018 CLSA_c01230 efa1f5a488901586b9ac8c653240c505 97 Pfam PF04977 Septum formation initiator 12 87 1.1E-18 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC CLSA_c25540 a792826097e17773f3001415ccffa09b 107 Pfam PF00085 Thioredoxin 8 96 6.2E-11 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 CLSA_c25540 a792826097e17773f3001415ccffa09b 107 Gene3D G3DSA:3.40.30.10 1 104 1.1E-21 T 12-10-2018 CLSA_c25540 a792826097e17773f3001415ccffa09b 107 SUPERFAMILY SSF52833 5 100 1.36E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c36070 fa750a3b45d041eb07bd038b26c66b3e 315 SUPERFAMILY SSF56281 48 300 9.68E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c36070 fa750a3b45d041eb07bd038b26c66b3e 315 Pfam PF00753 Metallo-beta-lactamase superfamily 83 208 1.4E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c36070 fa750a3b45d041eb07bd038b26c66b3e 315 SMART SM00849 80 262 2.9E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c36070 fa750a3b45d041eb07bd038b26c66b3e 315 Gene3D G3DSA:3.60.15.10 57 314 1.7E-63 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c19510 de43ff604683ed3e2818e0d8ae4b47a7 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 206 1.7E-53 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CLSA_c19510 de43ff604683ed3e2818e0d8ae4b47a7 215 Gene3D G3DSA:3.20.20.70 1 213 2.1E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c19510 de43ff604683ed3e2818e0d8ae4b47a7 215 Pfam PF01081 KDPG and KHG aldolase 12 199 2.6E-42 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CLSA_c19510 de43ff604683ed3e2818e0d8ae4b47a7 215 SUPERFAMILY SSF51569 3 208 2.2E-62 T 12-10-2018 CLSA_c26480 3df9599e3278ba400bb58141bc4c4699 341 Gene3D G3DSA:3.40.980.10 148 308 1.5E-29 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c26480 3df9599e3278ba400bb58141bc4c4699 341 Pfam PF00994 Probable molybdopterin binding domain 173 304 1.7E-22 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c26480 3df9599e3278ba400bb58141bc4c4699 341 SMART SM00852 173 306 2.4E-23 T 12-10-2018 IPR001453 MoaB/Mog domain CLSA_c26480 3df9599e3278ba400bb58141bc4c4699 341 SUPERFAMILY SSF53218 169 311 8.77E-35 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 43 239 4.7E-85 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 40 59 2.4E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 59 79 2.4E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 79 98 2.4E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 168 188 2.4E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 210 2.4E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 213 238 2.4E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 110 1.8E-21 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 38 47 1.8E-21 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 161 173 1.8E-21 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 1.8E-21 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 124 1.8E-21 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 229 239 1.8E-21 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 Pfam PF00813 FliP family 43 235 1.2E-81 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 216 228 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c39240 9cf5c365643b71119cb5e28a1d63a815 240 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 168 183 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLSA_c13190 aa8ac067e0497f5dc4ead4ea1512f268 137 Pfam PF09021 HutP 8 133 7.9E-43 T 12-10-2018 IPR015111 Hut operon regulatory protein HutP CLSA_c13190 aa8ac067e0497f5dc4ead4ea1512f268 137 SUPERFAMILY SSF111064 7 123 2.88E-5 T 12-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily CLSA_c09910 5818393a960d31a639c577b7a7c45494 298 Pfam PF00480 ROK family 6 293 1.2E-33 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLSA_c09910 5818393a960d31a639c577b7a7c45494 298 Gene3D G3DSA:3.30.420.40 121 285 8.7E-53 T 12-10-2018 CLSA_c09910 5818393a960d31a639c577b7a7c45494 298 Gene3D G3DSA:3.30.420.40 7 291 8.7E-53 T 12-10-2018 CLSA_c09910 5818393a960d31a639c577b7a7c45494 298 SUPERFAMILY SSF53067 4 295 4.91E-43 T 12-10-2018 CLSA_c15930 b94a8987a3e61a7f6cacdbfdd8cac037 131 Pfam PF12788 YmaF family 23 119 4.1E-38 T 12-10-2018 IPR024307 YmaF CLSA_c12620 bbc92479e1cc993f1abf7bcb1ef03183 212 Pfam PF02163 Peptidase family M50 120 181 8.3E-9 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CLSA_c30500 128843b22aaf48c22d93c93fdb89f662 227 SUPERFAMILY SSF46785 161 218 5.08E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c30500 128843b22aaf48c22d93c93fdb89f662 227 SUPERFAMILY SSF51206 17 150 2.88E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like CLSA_c30500 128843b22aaf48c22d93c93fdb89f662 227 Gene3D G3DSA:2.60.120.10 15 156 1.5E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c30500 128843b22aaf48c22d93c93fdb89f662 227 Gene3D G3DSA:1.10.10.10 158 226 2.1E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c30500 128843b22aaf48c22d93c93fdb89f662 227 Pfam PF00027 Cyclic nucleotide-binding domain 43 131 7.6E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain CLSA_c30500 128843b22aaf48c22d93c93fdb89f662 227 Pfam PF13545 Crp-like helix-turn-helix domain 164 223 2.3E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLSA_c09390 57986278108bf2735597cdd9eed645b9 257 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 8 124 2.5E-44 T 12-10-2018 IPR010056 Phage replisome organiser, N-terminal domain CLSA_c09390 57986278108bf2735597cdd9eed645b9 257 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 8 120 4.9E-23 T 12-10-2018 IPR010056 Phage replisome organiser, N-terminal domain CLSA_c39600 a06b6c854fe75f452ce8e22ced9ac0bb 262 Gene3D G3DSA:3.90.550.10 5 215 2.3E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39600 a06b6c854fe75f452ce8e22ced9ac0bb 262 SUPERFAMILY SSF53448 5 210 8.79E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39600 a06b6c854fe75f452ce8e22ced9ac0bb 262 Pfam PF02348 Cytidylyltransferase 11 212 2.3E-27 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CLSA_c33300 74dab0194123fafb867b8aa1ea2cf505 389 SUPERFAMILY SSF53822 35 381 1.33E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c33300 74dab0194123fafb867b8aa1ea2cf505 389 Gene3D G3DSA:3.40.50.2300 59 366 1.8E-107 T 12-10-2018 CLSA_c33300 74dab0194123fafb867b8aa1ea2cf505 389 Pfam PF13458 Periplasmic binding protein 37 375 1.4E-59 T 12-10-2018 IPR028081 Leucine-binding protein domain CLSA_c33300 74dab0194123fafb867b8aa1ea2cf505 389 Gene3D G3DSA:3.40.50.2300 152 284 1.8E-107 T 12-10-2018 CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 SMART SM00850 149 248 8.2E-10 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 Pfam PF04397 LytTr DNA-binding domain 154 236 2.9E-8 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 Pfam PF00072 Response regulator receiver domain 4 111 1.6E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 SMART SM00448 2 116 4.9E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 Gene3D G3DSA:2.40.50.1020 136 241 3.6E-6 T 12-10-2018 CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 SUPERFAMILY SSF52172 3 152 1.41E-19 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c06920 a0dab657d24caed9c1cad1f10810d41b 256 Gene3D G3DSA:3.40.50.2300 2 133 1.3E-20 T 12-10-2018 CLSA_c12520 d32d6b9d5e5689ede52309e862550dd3 458 Gene3D G3DSA:3.20.20.370 218 458 1.4E-6 T 12-10-2018 CLSA_c12520 d32d6b9d5e5689ede52309e862550dd3 458 SUPERFAMILY SSF88713 266 355 3.5E-8 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c12520 d32d6b9d5e5689ede52309e862550dd3 458 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 200 441 3.9E-55 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 CLSA_c12520 d32d6b9d5e5689ede52309e862550dd3 458 Pfam PF07833 Copper amine oxidase N-terminal domain 93 178 2.6E-6 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal CLSA_c26330 aa94e9fcbf52fab04df965174841d157 168 PIRSF PIRSF021377 1 155 1.4E-67 T 12-10-2018 IPR014229 Sporulation protein YtfJ CLSA_c26330 aa94e9fcbf52fab04df965174841d157 168 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 32 115 2.5E-31 T 12-10-2018 IPR014229 Sporulation protein YtfJ CLSA_c26330 aa94e9fcbf52fab04df965174841d157 168 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 5 122 1.7E-54 T 12-10-2018 IPR014229 Sporulation protein YtfJ CLSA_c44710 1dfca4aee9b13560c429131c9787ae52 209 SUPERFAMILY SSF109604 50 200 6.8E-19 T 12-10-2018 CLSA_c44710 1dfca4aee9b13560c429131c9787ae52 209 TIGRFAM TIGR00277 HDIG: HDIG domain 57 123 3.3E-10 T 12-10-2018 IPR006675 HDIG domain CLSA_c44710 1dfca4aee9b13560c429131c9787ae52 209 Pfam PF01966 HD domain 70 178 1.1E-9 T 12-10-2018 IPR006674 HD domain CLSA_c44710 1dfca4aee9b13560c429131c9787ae52 209 Gene3D G3DSA:1.10.3210.10 54 209 3.3E-10 T 12-10-2018 CLSA_c25190 5185a262cdd750a351007654f86a639a 182 Pfam PF07875 Coat F domain 101 162 1.9E-19 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 SUPERFAMILY SSF51126 24 356 8.38E-30 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 SMART SM00710 211 233 7500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 SMART SM00710 148 170 26.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 SMART SM00710 236 287 1800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 SMART SM00710 119 141 120.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 SMART SM00710 178 208 5800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat CLSA_c19770 4566838119a49e0486535f65bac6adeb 410 Gene3D G3DSA:2.160.20.10 26 408 1.0E-53 T 12-10-2018 IPR012334 Pectin lyase fold CLSA_c00320 52ed9303e317bcf80adea727af0f7bde 325 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 30 323 44.495 T 12-10-2018 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CLSA_c00320 52ed9303e317bcf80adea727af0f7bde 325 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 104 321 2.6E-43 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CLSA_c00320 52ed9303e317bcf80adea727af0f7bde 325 Pfam PF02666 Phosphatidylserine decarboxylase 115 321 3.4E-57 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CLSA_c26290 77ca44cce61cf925a7feccd465854139 329 Gene3D G3DSA:2.40.30.10 63 159 2.0E-10 T 12-10-2018 CLSA_c26290 77ca44cce61cf925a7feccd465854139 329 SUPERFAMILY SSF52343 166 315 8.92E-11 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c26290 77ca44cce61cf925a7feccd465854139 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 292 300 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLSA_c26290 77ca44cce61cf925a7feccd465854139 329 PIRSF PIRSF006816 62 315 3.7E-27 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c26290 77ca44cce61cf925a7feccd465854139 329 SUPERFAMILY SSF63380 65 160 1.04E-13 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c05180 d3597ecde8fae0c5e76517deac97f27c 420 Gene3D G3DSA:3.65.10.10 21 231 1.2E-162 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CLSA_c05180 d3597ecde8fae0c5e76517deac97f27c 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 42.894 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c05180 d3597ecde8fae0c5e76517deac97f27c 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 9.8E-173 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CLSA_c05180 d3597ecde8fae0c5e76517deac97f27c 420 SUPERFAMILY SSF55205 1 419 6.15E-131 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLSA_c05180 d3597ecde8fae0c5e76517deac97f27c 420 Gene3D G3DSA:3.65.10.10 6 415 1.2E-162 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CLSA_c05180 d3597ecde8fae0c5e76517deac97f27c 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.6E-98 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CLSA_c27680 8d89b4c17dd45a5558af56edfe5adef3 387 Pfam PF03600 Citrate transporter 29 312 7.8E-21 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CLSA_c07920 0360d2e90f3bc84ce8f207156e805135 231 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2 42 9.6E-13 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c07920 0360d2e90f3bc84ce8f207156e805135 231 Gene3D G3DSA:2.180.10.10 1 43 2.4E-10 T 12-10-2018 CLSA_c02840 37456990b2db15e17576a64588245b25 378 Gene3D G3DSA:3.90.1150.10 246 378 5.5E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c02840 37456990b2db15e17576a64588245b25 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 9.5E-144 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c02840 37456990b2db15e17576a64588245b25 378 SUPERFAMILY SSF53383 3 377 4.21E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c02840 37456990b2db15e17576a64588245b25 378 PIRSF PIRSF001434 1 378 8.9E-138 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c02840 37456990b2db15e17576a64588245b25 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLSA_c02840 37456990b2db15e17576a64588245b25 378 Gene3D G3DSA:3.40.640.10 1 245 1.2E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c01600 ff8bac9fb0b7f3b27e0af4900cf2ddef 51 Pfam PF10764 Inhibitor of sigma-G Gin 1 43 8.6E-16 T 12-10-2018 IPR019700 Anti-sigma-G factor Gin CLSA_c08330 926f4b2004c84cfaf3414f62d85e228f 110 Pfam PF14107 Domain of unknown function (DUF4280) 8 108 7.6E-28 T 12-10-2018 IPR025460 Protein of unknown function DUF4280 CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 SUPERFAMILY SSF158791 159 285 1.1E-28 T 12-10-2018 CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 Pfam PF03448 MgtE intracellular N domain 185 286 1.9E-26 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 Gene3D G3DSA:1.25.60.10 163 283 1.6E-23 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 SMART SM00116 295 348 1.5 T 12-10-2018 IPR000644 CBS domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 SMART SM00116 359 407 4.0E-4 T 12-10-2018 IPR000644 CBS domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 SMART SM00924 185 288 2.0E-33 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 SUPERFAMILY SSF54631 287 406 2.02E-28 T 12-10-2018 CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 Pfam PF05239 PRC-barrel domain 6 68 1.3E-6 T 12-10-2018 IPR027275 PRC-barrel domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 Pfam PF00571 CBS domain 288 344 1.5E-6 T 12-10-2018 IPR000644 CBS domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 Pfam PF00571 CBS domain 353 406 9.7E-8 T 12-10-2018 IPR000644 CBS domain CLSA_c40560 b22f3afbbc16212ff26fc300395c4a50 415 Gene3D G3DSA:3.10.580.10 284 407 2.7E-37 T 12-10-2018 CLSA_c04190 38ed32747515ce93e58fc87997a691a6 251 Pfam PF03374 Phage antirepressor protein KilAC domain 146 250 1.2E-26 T 12-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 CLSA_c04190 38ed32747515ce93e58fc87997a691a6 251 SMART SM01040 14 108 1.1E-25 T 12-10-2018 IPR003497 BRO N-terminal domain CLSA_c04190 38ed32747515ce93e58fc87997a691a6 251 Pfam PF02498 BRO family, N-terminal domain 14 108 1.8E-17 T 12-10-2018 IPR003497 BRO N-terminal domain CLSA_c03750 d985ad2691693a28e027dd21a12f444a 278 Pfam PF13057 Protein of unknown function (DUF3919) 40 271 2.4E-96 T 12-10-2018 IPR025031 Protein of unknown function DUF3919 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 Gene3D G3DSA:1.10.287.950 257 568 4.5E-55 T 12-10-2018 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 520 1.5E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 SUPERFAMILY SSF58104 231 568 7.76E-56 T 12-10-2018 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 180 3.3E-30 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 SMART SM00304 209 263 4.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 341 3.1E-15 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 3.1E-15 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 3.1E-15 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c35080 56a05d132b8109836298567e12c4c5ea 569 SMART SM00283 285 568 1.4E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c02400 e13006d6bf22838e3135144406288dcd 280 Pfam PF05681 Fumarate hydratase (Fumerase) 10 277 1.5E-116 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLSA_c02400 e13006d6bf22838e3135144406288dcd 280 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 279 3.0E-99 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLSA_c08440 332f5df07d5c549a6616e27a73223afe 322 Pfam PF09935 Protein of unknown function (DUF2167) 37 269 6.2E-88 T 12-10-2018 IPR018682 Protein of unknown function DUF2167, membrane CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 SUPERFAMILY SSF52540 160 432 1.09E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 Gene3D G3DSA:3.40.50.300 152 225 1.1E-10 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 Gene3D G3DSA:3.40.50.300 226 369 5.5E-24 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 SMART SM00382 192 371 6.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 539 547 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 Gene3D G3DSA:3.30.230.10 451 631 2.1E-49 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 TIGRFAM TIGR02903 spore_lon_C: ATP-dependent protease, Lon family 21 630 1.1E-302 T 12-10-2018 IPR014252 Sporulation protease LonC CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 SUPERFAMILY SSF54211 461 629 1.77E-40 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 196 368 3.2E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 536 555 4.9E-29 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 585 4.9E-29 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 461 477 4.9E-29 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 589 607 4.9E-29 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 200 219 4.9E-29 T 12-10-2018 CLSA_c45280 3abadfc1b6853e8ea58381c05218662e 631 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 437 630 4.6E-33 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CLSA_c36120 78b7427ac00fae278c35b98ccfcee672 291 Gene3D G3DSA:3.40.50.10490 97 280 1.0E-34 T 12-10-2018 CLSA_c36120 78b7427ac00fae278c35b98ccfcee672 291 SUPERFAMILY SSF53697 105 263 2.45E-28 T 12-10-2018 CLSA_c36120 78b7427ac00fae278c35b98ccfcee672 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 67 3.4E-14 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLSA_c36120 78b7427ac00fae278c35b98ccfcee672 291 SUPERFAMILY SSF46689 10 71 2.51E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c36120 78b7427ac00fae278c35b98ccfcee672 291 Pfam PF01380 SIS domain 128 240 2.5E-19 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CLSA_c36120 78b7427ac00fae278c35b98ccfcee672 291 Gene3D G3DSA:1.10.10.10 2 72 8.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c07300 500041355898fa23c234ccc2658549b8 523 SMART SM00900 318 393 8.5E-16 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 SMART SM00900 447 522 4.6E-16 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 SUPERFAMILY SSF54862 60 245 5.58E-12 T 12-10-2018 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 Pfam PF04205 FMN-binding domain 321 391 7.8E-12 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 Pfam PF04205 FMN-binding domain 450 519 1.0E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 Gene3D G3DSA:3.90.1010.20 339 408 2.3E-8 T 12-10-2018 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 Gene3D G3DSA:3.90.1010.20 469 523 5.0E-6 T 12-10-2018 CLSA_c07300 500041355898fa23c234ccc2658549b8 523 Pfam PF12801 4Fe-4S binding domain 51 95 4.6E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c07300 500041355898fa23c234ccc2658549b8 523 Pfam PF12801 4Fe-4S binding domain 154 199 1.2E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c07300 500041355898fa23c234ccc2658549b8 523 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c29310 ceb05ad0b10c2657bd189ed892ba68d9 609 Pfam PF07510 Protein of unknown function (DUF1524) 467 588 1.0E-9 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 CLSA_c29310 ceb05ad0b10c2657bd189ed892ba68d9 609 Pfam PF03235 Protein of unknown function DUF262 12 224 8.1E-31 T 12-10-2018 IPR004919 Domain of unknown function DUF262 CLSA_c31250 e3e0e61a8e190587e791070d3cb1bebb 268 SUPERFAMILY SSF69304 106 264 2.88E-5 T 12-10-2018 CLSA_c09160 931dad503e77afaa02a2e9d27a2ec2e3 182 SUPERFAMILY SSF50249 5 179 2.4E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c09160 931dad503e77afaa02a2e9d27a2ec2e3 182 Gene3D G3DSA:2.40.50.140 1 179 4.0E-74 T 12-10-2018 CLSA_c09160 931dad503e77afaa02a2e9d27a2ec2e3 182 Pfam PF10991 Protein of unknown function (DUF2815) 8 177 1.1E-71 T 12-10-2018 IPR022595 Protein of unknown function DUF2815 CLSA_c07690 05925dc0b82ada945419752a37d61e0f 330 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 130 284 3.2E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c07690 05925dc0b82ada945419752a37d61e0f 330 SMART SM00283 65 316 9.6E-19 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c07690 05925dc0b82ada945419752a37d61e0f 330 Gene3D G3DSA:1.10.287.950 26 329 1.2E-50 T 12-10-2018 CLSA_c07690 05925dc0b82ada945419752a37d61e0f 330 SUPERFAMILY SSF58104 26 323 2.22E-48 T 12-10-2018 CLSA_c36090 d7c1d26682bcd1f69e74c600a43929d5 151 Gene3D G3DSA:1.10.10.10 4 144 7.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c36090 d7c1d26682bcd1f69e74c600a43929d5 151 Pfam PF01047 MarR family 37 90 1.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c36090 d7c1d26682bcd1f69e74c600a43929d5 151 SMART SM00347 28 129 5.3E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLSA_c36090 d7c1d26682bcd1f69e74c600a43929d5 151 SUPERFAMILY SSF46785 31 144 2.41E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c25580 2a7dac76922ed9bdbe55a3d299997c04 201 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 130 164 4.6E-10 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c25580 2a7dac76922ed9bdbe55a3d299997c04 201 Gene3D G3DSA:2.160.10.10 1 201 8.6E-76 T 12-10-2018 CLSA_c25580 2a7dac76922ed9bdbe55a3d299997c04 201 Pfam PF12464 Maltose acetyltransferase 6 57 9.2E-16 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLSA_c25580 2a7dac76922ed9bdbe55a3d299997c04 201 SUPERFAMILY SSF51161 2 196 2.5E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c25580 2a7dac76922ed9bdbe55a3d299997c04 201 SMART SM01266 4 58 1.9E-20 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLSA_c22250 4214dffd5e0c0d43a92b610a7b61b75a 236 ProDom PD019177 PF1672 MJ0935 ST1363 PH1730 UNCHARACTERIZED ARCHAEAL 25 69 5.0E-7 T 12-10-2018 IPR007368 Protein of unknown function DUF434 CLSA_c22250 4214dffd5e0c0d43a92b610a7b61b75a 236 Pfam PF04256 Protein of unknown function (DUF434) 25 77 4.3E-22 T 12-10-2018 IPR007368 Protein of unknown function DUF434 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 6.6E-61 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 Gene3D G3DSA:3.30.360.10 149 314 5.1E-144 T 12-10-2018 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 SUPERFAMILY SSF55347 149 312 8.63E-65 T 12-10-2018 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 SMART SM00846 2 150 7.0E-91 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 9.4E-32 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 9.4E-32 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 9.4E-32 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 265 280 9.4E-32 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 9.4E-32 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 PIRSF PIRSF000149 1 333 1.4E-121 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 Gene3D G3DSA:3.40.50.720 4 324 5.1E-144 T 12-10-2018 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 SUPERFAMILY SSF51735 2 166 6.37E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 324 2.1E-132 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c40430 f8f2f56a68e67b33b8bfe1cb796c6716 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 101 2.0E-39 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLSA_c07950 45bd2f6f06d772b87288620615b6f663 149 Pfam PF14433 SUKH-3 immunity protein 4 137 1.3E-23 T 12-10-2018 IPR025850 SUKH-3 immunity protein CLSA_c34250 ae97697b258561cd8c505f04c1febf6e 137 Gene3D G3DSA:3.30.530.20 1 136 2.0E-30 T 12-10-2018 IPR023393 START-like domain superfamily CLSA_c34250 ae97697b258561cd8c505f04c1febf6e 137 SUPERFAMILY SSF55961 1 137 3.36E-32 T 12-10-2018 CLSA_c04290 5206a8bd0d51dfd89fed2dff2fde56a3 302 Gene3D G3DSA:3.40.960.10 185 301 9.7E-11 T 12-10-2018 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 287 4.2E-91 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 PIRSF PIRSF001365 1 292 1.2E-89 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 SUPERFAMILY SSF51569 1 288 9.52E-97 T 12-10-2018 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 Gene3D G3DSA:3.20.20.70 2 292 7.0E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 288 62.721 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 3.6E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 3.6E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 3.6E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 3.6E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 288 9.1E-107 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CLSA_c27510 bdd1dde9f80b84c98d3896144b709a8b 292 SMART SM01130 3 290 1.8E-127 T 12-10-2018 IPR002220 DapA-like GO:0016829 CLSA_c21230 10e60a8a16148edf939eea7d1af6253c 239 Pfam PF12730 ABC-2 family transporter protein 6 178 1.2E-25 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c02200 45c100c59b614c3cc8df54920f33c225 59 SUPERFAMILY SSF55129 1 59 1.44E-16 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CLSA_c02200 45c100c59b614c3cc8df54920f33c225 59 PIRSF PIRSF002211 1 59 1.1E-22 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02200 45c100c59b614c3cc8df54920f33c225 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.18 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02200 45c100c59b614c3cc8df54920f33c225 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 5.6E-21 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02200 45c100c59b614c3cc8df54920f33c225 59 Gene3D G3DSA:3.30.1390.20 1 59 2.8E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CLSA_c02200 45c100c59b614c3cc8df54920f33c225 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 53 2.1E-15 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLSA_c28660 2626c93662a2fe42b04ddd3b10394805 474 SUPERFAMILY SSF102114 144 461 5.76E-72 T 12-10-2018 CLSA_c28660 2626c93662a2fe42b04ddd3b10394805 474 SMART SM00729 147 374 7.2E-50 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c28660 2626c93662a2fe42b04ddd3b10394805 474 Gene3D G3DSA:3.80.30.20 107 468 1.4E-71 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c28660 2626c93662a2fe42b04ddd3b10394805 474 Pfam PF04055 Radical SAM superfamily 154 328 7.2E-23 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c28660 2626c93662a2fe42b04ddd3b10394805 474 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 66 469 5.1E-159 T 12-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ CLSA_c10270 fb11b4e2911a82a18252bc817c1bebc0 323 Gene3D G3DSA:3.30.360.10 138 323 1.2E-44 T 12-10-2018 CLSA_c10270 fb11b4e2911a82a18252bc817c1bebc0 323 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 3.2E-20 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLSA_c10270 fb11b4e2911a82a18252bc817c1bebc0 323 SUPERFAMILY SSF51735 3 153 2.25E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c10270 fb11b4e2911a82a18252bc817c1bebc0 323 Gene3D G3DSA:3.40.50.720 1 137 1.5E-38 T 12-10-2018 CLSA_c10270 fb11b4e2911a82a18252bc817c1bebc0 323 SUPERFAMILY SSF55347 127 290 4.91E-40 T 12-10-2018 CLSA_c23530 a5e0e8d6f400f782a0fa5397cd4d10ea 137 Pfam PF06935 Protein of unknown function (DUF1284) 19 121 4.3E-25 T 12-10-2018 IPR009702 Protein of unknown function DUF1284 CLSA_c24800 653c69c22c6994fe1508b847c5a8420d 317 Gene3D G3DSA:3.40.50.360 3 195 1.3E-24 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c24800 653c69c22c6994fe1508b847c5a8420d 317 Pfam PF03358 NADPH-dependent FMN reductase 5 163 1.7E-15 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c24800 653c69c22c6994fe1508b847c5a8420d 317 SUPERFAMILY SSF52218 5 198 7.38E-23 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c10880 648ca17b8a3c9d2cbe16590db8f5e9ad 218 SUPERFAMILY SSF53335 31 215 2.22E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c10880 648ca17b8a3c9d2cbe16590db8f5e9ad 218 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 25 213 1.8E-40 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CLSA_c10880 648ca17b8a3c9d2cbe16590db8f5e9ad 218 Gene3D G3DSA:3.40.50.150 1 215 6.5E-60 T 12-10-2018 CLSA_c10880 648ca17b8a3c9d2cbe16590db8f5e9ad 218 Pfam PF02390 Putative methyltransferase 37 209 7.8E-34 T 12-10-2018 CLSA_c10880 648ca17b8a3c9d2cbe16590db8f5e9ad 218 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 218 25.395 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 SUPERFAMILY SSF49265 816 913 6.51E-5 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Gene3D G3DSA:2.60.40.10 1019 1123 7.6E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Gene3D G3DSA:2.10.270.10 26 74 4.9E-8 T 12-10-2018 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Gene3D G3DSA:2.60.120.260 1290 1431 7.0E-39 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF00754 F5/8 type C domain 1306 1420 9.1E-17 T 12-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07550 Protein of unknown function (DUF1533) 1565 1620 2.0E-10 T 12-10-2018 IPR011432 Domain of unknown function DUF1533 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF01473 Putative cell wall binding repeat 90 109 0.5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF01473 Putative cell wall binding repeat 111 130 0.15 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF01473 Putative cell wall binding repeat 132 151 2.5E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF01473 Putative cell wall binding repeat 49 67 1.8E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF01473 Putative cell wall binding repeat 69 88 5.0E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 SUPERFAMILY SSF49785 1289 1430 2.13E-20 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Gene3D G3DSA:2.10.270.10 113 194 1.1E-17 T 12-10-2018 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Gene3D G3DSA:2.60.40.10 1622 1748 3.1E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07532 Bacterial Ig-like domain (group 4) 266 319 3.7E-11 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07532 Bacterial Ig-like domain (group 4) 449 503 8.8E-10 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07532 Bacterial Ig-like domain (group 4) 358 411 5.4E-10 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07532 Bacterial Ig-like domain (group 4) 1223 1272 1.3E-7 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07532 Bacterial Ig-like domain (group 4) 539 595 1.7E-11 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Pfam PF07532 Bacterial Ig-like domain (group 4) 633 688 6.3E-12 T 12-10-2018 IPR011081 Bacterial Ig-related CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 SUPERFAMILY SSF69360 30 208 1.41E-43 T 12-10-2018 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 SUPERFAMILY SSF49265 1022 1116 2.64E-6 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 CLSA_c34010 a6b525e6ff68deb9811799c0329fabe2 1756 Gene3D G3DSA:2.10.270.10 75 112 1.2E-12 T 12-10-2018 CLSA_c35070 0b4042856a018d488ed383e941a32ad4 620 Gene3D G3DSA:3.10.620.30 98 237 1.9E-18 T 12-10-2018 CLSA_c35070 0b4042856a018d488ed383e941a32ad4 620 Gene3D G3DSA:1.10.10.1270 461 516 9.3E-6 T 12-10-2018 CLSA_c35070 0b4042856a018d488ed383e941a32ad4 620 SUPERFAMILY SSF54001 119 224 4.91E-21 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c35070 0b4042856a018d488ed383e941a32ad4 620 SMART SM00460 163 219 6.9E-7 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c35070 0b4042856a018d488ed383e941a32ad4 620 Pfam PF01841 Transglutaminase-like superfamily 129 217 1.1E-11 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 Gene3D G3DSA:3.40.50.620 5 204 5.0E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 208 291 2.2E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 SMART SM00893 9 197 1.5E-62 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 Gene3D G3DSA:3.40.50.1220 205 334 2.1E-56 T 12-10-2018 CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 SUPERFAMILY SSF52467 206 326 1.08E-47 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 SUPERFAMILY SSF52402 7 202 5.16E-61 T 12-10-2018 CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 272 298 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 Pfam PF01012 Electron transfer flavoprotein domain 9 187 1.9E-53 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03590 f08936e54bdce191e6716f2597541de7 335 PIRSF PIRSF000089 5 332 4.4E-123 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CLSA_c33760 1a67bc1805a63f065e95cf9948a4b53c 69 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 24 33 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c33760 1a67bc1805a63f065e95cf9948a4b53c 69 Gene3D G3DSA:1.10.8.910 9 69 6.4E-23 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c33760 1a67bc1805a63f065e95cf9948a4b53c 69 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 9 68 4.6E-25 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c13370 b3630431f11745c75aaf9612b7e2850f 519 Gene3D G3DSA:3.40.710.10 161 518 1.5E-66 T 12-10-2018 CLSA_c13370 b3630431f11745c75aaf9612b7e2850f 519 SUPERFAMILY SSF56601 190 516 9.91E-68 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CLSA_c13370 b3630431f11745c75aaf9612b7e2850f 519 Pfam PF00905 Penicillin binding protein transpeptidase domain 227 513 1.0E-48 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLSA_c05230 b1b95b695b608e0ae3902260ada1ea4f 179 Pfam PF06866 Protein of unknown function (DUF1256) 10 162 1.9E-60 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 CLSA_c05230 b1b95b695b608e0ae3902260ada1ea4f 179 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 28 163 4.5E-42 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 CLSA_c05230 b1b95b695b608e0ae3902260ada1ea4f 179 SUPERFAMILY SSF53163 16 169 2.62E-42 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily CLSA_c32890 c41e9c875fe2108980bc57fb3dae73b3 327 Hamap MF_01562 UPF0365 protein . 1 313 45.026 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity CLSA_c32890 c41e9c875fe2108980bc57fb3dae73b3 327 Pfam PF12127 SigmaW regulon antibacterial 6 309 9.5E-154 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity CLSA_c30790 352f0161b96da6327e24afebd02e9d40 105 Gene3D G3DSA:3.40.50.10580 2 105 4.1E-33 T 12-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30790 352f0161b96da6327e24afebd02e9d40 105 Hamap MF_00312 V-type ATP synthase subunit F [atpF]. 3 103 17.433 T 12-10-2018 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal CLSA_c30790 352f0161b96da6327e24afebd02e9d40 105 SUPERFAMILY SSF159468 5 103 3.01E-26 T 12-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30790 352f0161b96da6327e24afebd02e9d40 105 Pfam PF01990 ATP synthase (F/14-kDa) subunit 5 94 1.5E-25 T 12-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c11990 00ae89ee82a45c87d935d0562b57fdc5 410 Gene3D G3DSA:1.10.3430.10 1 409 5.5E-143 T 12-10-2018 IPR029020 Ammonium/urea transporter CLSA_c11990 00ae89ee82a45c87d935d0562b57fdc5 410 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CLSA_c11990 00ae89ee82a45c87d935d0562b57fdc5 410 Pfam PF00909 Ammonium Transporter Family 11 405 2.8E-126 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CLSA_c11990 00ae89ee82a45c87d935d0562b57fdc5 410 SUPERFAMILY SSF111352 4 385 1.44E-120 T 12-10-2018 CLSA_c11990 00ae89ee82a45c87d935d0562b57fdc5 410 TIGRFAM TIGR00836 amt: ammonium transporter 8 405 1.2E-139 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 SUPERFAMILY SSF52242 46 127 3.34E-6 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 SMART SM00729 173 384 4.0E-30 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 Gene3D G3DSA:3.80.30.20 171 366 1.4E-20 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 Pfam PF13311 Protein of unknown function (DUF4080) 366 520 8.4E-44 T 12-10-2018 IPR025288 Domain of unknown function DUF4080 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 Pfam PF04055 Radical SAM superfamily 178 338 3.4E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 SUPERFAMILY SSF102114 152 403 4.45E-44 T 12-10-2018 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 Gene3D G3DSA:3.40.50.280 17 141 3.5E-8 T 12-10-2018 CLSA_c30960 a308b7eb0796b678dbf790bc092676b5 552 Pfam PF02310 B12 binding domain 10 122 2.5E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLSA_c19630 a2062366e5c0aebc1cbc1daaee24f3e4 438 PIRSF PIRSF006060 1 436 7.7E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c19630 a2062366e5c0aebc1cbc1daaee24f3e4 438 Gene3D G3DSA:1.20.1740.10 1 437 6.2E-92 T 12-10-2018 CLSA_c19630 a2062366e5c0aebc1cbc1daaee24f3e4 438 Pfam PF13520 Amino acid permease 6 394 1.0E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c20470 e4a720ef0c399f9ddd697660f39a2308 153 SUPERFAMILY SSF103039 1 151 2.22E-33 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c20470 e4a720ef0c399f9ddd697660f39a2308 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 125 8.5E-18 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CLSA_c20470 e4a720ef0c399f9ddd697660f39a2308 153 Gene3D G3DSA:3.40.1550.10 1 153 8.1E-41 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c15620 81c4bdf846f938d5357845be82654b25 218 PIRSF PIRSF006293 2 218 5.0E-80 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLSA_c15620 81c4bdf846f938d5357845be82654b25 218 Gene3D G3DSA:3.40.50.620 2 218 2.6E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c15620 81c4bdf846f938d5357845be82654b25 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 205 7.0E-83 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLSA_c15620 81c4bdf846f938d5357845be82654b25 218 SUPERFAMILY SSF52402 3 212 4.85E-70 T 12-10-2018 CLSA_c15620 81c4bdf846f938d5357845be82654b25 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 212 2.1E-85 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLSA_c15620 81c4bdf846f938d5357845be82654b25 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 218 51.832 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLSA_c25210 3de2402da4849566ece1ca8a96a0348e 333 SUPERFAMILY SSF51395 1 332 4.28E-97 T 12-10-2018 CLSA_c25210 3de2402da4849566ece1ca8a96a0348e 333 Gene3D G3DSA:3.20.20.70 1 333 2.6E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c25210 3de2402da4849566ece1ca8a96a0348e 333 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 328 5.5E-72 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLSA_c44310 de721b16b89b891aafea3f0ed0246992 171 Gene3D G3DSA:1.10.260.40 9 101 1.3E-21 T 12-10-2018 CLSA_c44310 de721b16b89b891aafea3f0ed0246992 171 Pfam PF01381 Helix-turn-helix 13 67 3.9E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c44310 de721b16b89b891aafea3f0ed0246992 171 SMART SM00530 12 67 8.5E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c44310 de721b16b89b891aafea3f0ed0246992 171 SUPERFAMILY SSF47413 6 71 1.69E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c14290 c405acf96e1f80812289e22562b1feff 212 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 171 2.6E-7 T 12-10-2018 IPR000477 Reverse transcriptase domain CLSA_c14290 c405acf96e1f80812289e22562b1feff 212 SUPERFAMILY SSF56672 58 208 1.22E-17 T 12-10-2018 CLSA_c29630 bf2d3d119f26a2fe9fad1dd613096b83 307 Gene3D G3DSA:3.30.420.40 159 277 2.4E-17 T 12-10-2018 CLSA_c29630 bf2d3d119f26a2fe9fad1dd613096b83 307 Gene3D G3DSA:3.30.420.40 12 288 2.4E-17 T 12-10-2018 CLSA_c29630 bf2d3d119f26a2fe9fad1dd613096b83 307 SUPERFAMILY SSF53067 159 293 2.3E-12 T 12-10-2018 CLSA_c29630 bf2d3d119f26a2fe9fad1dd613096b83 307 Pfam PF06406 StbA protein 93 209 1.9E-6 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA CLSA_c32420 4c7699e85f7c00df381e66be9d6df824 306 Gene3D G3DSA:1.20.58.340 114 229 6.2E-13 T 12-10-2018 CLSA_c32420 4c7699e85f7c00df381e66be9d6df824 306 SUPERFAMILY SSF143865 32 240 5.49E-28 T 12-10-2018 CLSA_c32420 4c7699e85f7c00df381e66be9d6df824 306 SUPERFAMILY SSF144083 242 303 1.1E-19 T 12-10-2018 CLSA_c32420 4c7699e85f7c00df381e66be9d6df824 306 Pfam PF01544 CorA-like Mg2+ transporter protein 33 301 2.2E-60 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLSA_c32420 4c7699e85f7c00df381e66be9d6df824 306 Gene3D G3DSA:1.20.58.340 231 306 1.7E-25 T 12-10-2018 CLSA_c24320 a18e1c9f64ab86df51985d92b859f87e 259 Pfam PF01048 Phosphorylase superfamily 23 240 1.5E-40 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLSA_c24320 a18e1c9f64ab86df51985d92b859f87e 259 Gene3D G3DSA:3.40.50.1580 7 259 1.1E-86 T 12-10-2018 CLSA_c24320 a18e1c9f64ab86df51985d92b859f87e 259 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 11 253 2.2E-98 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CLSA_c24320 a18e1c9f64ab86df51985d92b859f87e 259 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 69 84 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLSA_c24320 a18e1c9f64ab86df51985d92b859f87e 259 SUPERFAMILY SSF53167 10 254 1.31E-74 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CLSA_c20640 ef8b6b918f25a457fba7691a164762f5 140 Gene3D G3DSA:3.40.50.510 2 138 3.5E-42 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c20640 ef8b6b918f25a457fba7691a164762f5 140 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 9.6E-43 T 12-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CLSA_c20640 ef8b6b918f25a457fba7691a164762f5 140 Pfam PF03610 PTS system fructose IIA component 4 115 3.3E-30 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLSA_c20640 ef8b6b918f25a457fba7691a164762f5 140 SUPERFAMILY SSF53062 1 128 1.44E-38 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 CLSA_c43220 e4e7e5fb1a58d2c6ac38ec5aafa8267d 76 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 3 72 1.4E-16 T 12-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 CLSA_c43220 e4e7e5fb1a58d2c6ac38ec5aafa8267d 76 Gene3D G3DSA:1.10.1200.10 1 76 3.5E-22 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c43220 e4e7e5fb1a58d2c6ac38ec5aafa8267d 76 SUPERFAMILY SSF47336 1 74 9.29E-15 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c43220 e4e7e5fb1a58d2c6ac38ec5aafa8267d 76 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 76 32.232 T 12-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 CLSA_c43220 e4e7e5fb1a58d2c6ac38ec5aafa8267d 76 Pfam PF00550 Phosphopantetheine attachment site 3 72 5.0E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain CLSA_c28320 9148843ffbfd6b1b7c19d9c0d74b16f2 185 Gene3D G3DSA:3.20.20.400 1 185 1.4E-59 T 12-10-2018 IPR035928 GlpP-like superfamily CLSA_c28320 9148843ffbfd6b1b7c19d9c0d74b16f2 185 PIRSF PIRSF016897 1 185 3.8E-63 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 CLSA_c28320 9148843ffbfd6b1b7c19d9c0d74b16f2 185 SUPERFAMILY SSF110391 11 185 8.89E-56 T 12-10-2018 IPR035928 GlpP-like superfamily CLSA_c28320 9148843ffbfd6b1b7c19d9c0d74b16f2 185 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 12 183 3.5E-61 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 CLSA_c38620 5e3913bc8ab3a050e92d396ad8d971ef 180 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 16 172 3.2E-36 T 12-10-2018 IPR030949 ECF transporter S component, folate family CLSA_c38620 5e3913bc8ab3a050e92d396ad8d971ef 180 Gene3D G3DSA:1.10.1760.20 10 179 2.1E-46 T 12-10-2018 CLSA_c38620 5e3913bc8ab3a050e92d396ad8d971ef 180 Pfam PF12822 ECF transporter, substrate-specific component 19 168 7.8E-15 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLSA_c32090 1eec847bf6d9b754cff7229cbb6dde94 367 Gene3D G3DSA:1.10.1610.10 15 342 6.5E-129 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CLSA_c32090 1eec847bf6d9b754cff7229cbb6dde94 367 SUPERFAMILY SSF52733 9 351 1.03E-110 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CLSA_c32090 1eec847bf6d9b754cff7229cbb6dde94 367 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 17 352 33.794 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CLSA_c32090 1eec847bf6d9b754cff7229cbb6dde94 367 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 21 350 5.6E-128 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CLSA_c32090 1eec847bf6d9b754cff7229cbb6dde94 367 Pfam PF02277 Phosphoribosyltransferase 15 350 1.1E-124 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CLSA_c32090 1eec847bf6d9b754cff7229cbb6dde94 367 Gene3D G3DSA:3.40.50.10210 61 333 6.5E-129 T 12-10-2018 CLSA_c16810 0407d3998a35e502bf9dcf349509cc52 109 SUPERFAMILY SSF53335 33 103 4.91E-8 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c16810 0407d3998a35e502bf9dcf349509cc52 109 Gene3D G3DSA:3.40.50.150 29 109 3.4E-15 T 12-10-2018 CLSA_c17890 f3728904aac76374e5b7c6ef12cc0fac 367 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 281 365 3.8E-5 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLSA_c17890 f3728904aac76374e5b7c6ef12cc0fac 367 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 179 2.7E-35 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLSA_c17890 f3728904aac76374e5b7c6ef12cc0fac 367 SUPERFAMILY SSF52540 6 218 4.4E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17890 f3728904aac76374e5b7c6ef12cc0fac 367 Gene3D G3DSA:3.40.50.300 1 196 4.9E-48 T 12-10-2018 CLSA_c25820 026d82953d0043545bc8b4e4a65318e9 579 Pfam PF03961 Flagellar Assembly Protein A 69 548 9.5E-75 T 12-10-2018 IPR005646 Flagellar assembly protein A CLSA_c42020 421273fb74a335de6503357d01a6feb9 366 SUPERFAMILY SSF53335 22 165 1.35E-18 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c42020 421273fb74a335de6503357d01a6feb9 366 Gene3D G3DSA:3.40.50.150 24 197 8.1E-21 T 12-10-2018 CLSA_c42020 421273fb74a335de6503357d01a6feb9 366 Pfam PF13578 Methyltransferase domain 46 164 5.6E-22 T 12-10-2018 CLSA_c06200 c09938e31ee5ab27f6761955ef3d4a92 376 Pfam PF01098 Cell cycle protein 20 372 5.4E-88 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c06200 c09938e31ee5ab27f6761955ef3d4a92 376 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 16 372 4.4E-104 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c06200 c09938e31ee5ab27f6761955ef3d4a92 376 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 329 353 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c14700 6d1a81caa0c5ff9e9099b8096ed39acd 108 Pfam PF07561 Domain of Unknown Function (DUF1540) 4 42 1.5E-7 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 CLSA_c14700 6d1a81caa0c5ff9e9099b8096ed39acd 108 Pfam PF07561 Domain of Unknown Function (DUF1540) 68 105 1.1E-7 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 CLSA_c27270 281713a05317976d6962f4969d56736f 257 Pfam PF05949 Bacterial protein of unknown function (DUF881) 105 252 2.0E-28 T 12-10-2018 IPR010273 Protein of unknown function DUF881 CLSA_c27270 281713a05317976d6962f4969d56736f 257 Gene3D G3DSA:3.30.70.1880 104 257 2.1E-26 T 12-10-2018 CLSA_c31290 56c329c8457df78f3632c09828191deb 253 SUPERFAMILY SSF51366 1 252 1.96E-81 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c31290 56c329c8457df78f3632c09828191deb 253 Pfam PF00977 Histidine biosynthesis protein 5 236 1.6E-87 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CLSA_c31290 56c329c8457df78f3632c09828191deb 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 1.6E-110 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CLSA_c31290 56c329c8457df78f3632c09828191deb 253 Gene3D G3DSA:3.20.20.70 2 253 3.9E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c31290 56c329c8457df78f3632c09828191deb 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 47.575 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CLSA_c39940 60198e3029c82ad429e8d10bf0f7a270 183 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 169 2.3E-57 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 CLSA_c39940 60198e3029c82ad429e8d10bf0f7a270 183 Gene3D G3DSA:3.40.50.880 1 163 2.0E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c39940 60198e3029c82ad429e8d10bf0f7a270 183 Pfam PF01965 DJ-1/PfpI family 2 161 6.7E-49 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CLSA_c39940 60198e3029c82ad429e8d10bf0f7a270 183 SUPERFAMILY SSF52317 1 180 1.29E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Pfam PF01926 50S ribosome-binding GTPase 228 341 7.1E-28 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 377 2.6E-27 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Pfam PF12631 MnmE helical domain 130 457 4.7E-54 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 296 314 9.7E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 249 9.7E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 127 1.9E-41 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 460 34.836 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Gene3D G3DSA:3.40.50.300 227 388 2.8E-106 T 12-10-2018 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Gene3D G3DSA:1.20.120.430 128 460 2.8E-106 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 SUPERFAMILY SSF52540 79 377 2.92E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 Gene3D G3DSA:3.30.1360.120 1 127 7.7E-49 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLSA_c45470 01abf7a865619533e605ecf3268d60d4 460 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 460 1.7E-123 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CLSA_c26280 93d60b8c0994100833864f6ea40f461f 219 Pfam PF01473 Putative cell wall binding repeat 47 65 7.9E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c26280 93d60b8c0994100833864f6ea40f461f 219 SUPERFAMILY SSF69360 25 103 3.66E-13 T 12-10-2018 CLSA_c26280 93d60b8c0994100833864f6ea40f461f 219 Gene3D G3DSA:2.10.270.10 25 84 5.3E-12 T 12-10-2018 CLSA_c44990 4cbf73ee3f0b6cb9d5dd400fb1454c36 260 SUPERFAMILY SSF53187 75 256 1.44E-52 T 12-10-2018 CLSA_c44990 4cbf73ee3f0b6cb9d5dd400fb1454c36 260 SMART SM00646 142 252 3.9E-28 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c44990 4cbf73ee3f0b6cb9d5dd400fb1454c36 260 Gene3D G3DSA:3.40.630.40 71 260 2.4E-58 T 12-10-2018 CLSA_c44990 4cbf73ee3f0b6cb9d5dd400fb1454c36 260 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 76 252 9.7E-50 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLSA_c43050 85bb8d7f585e4b00144b49792c10bd08 477 ProSitePatterns PS00218 Amino acid permeases signature. 41 72 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CLSA_c43050 85bb8d7f585e4b00144b49792c10bd08 477 Gene3D G3DSA:1.20.1740.10 6 469 1.1E-64 T 12-10-2018 CLSA_c43050 85bb8d7f585e4b00144b49792c10bd08 477 PIRSF PIRSF006060 1 476 1.8E-90 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c43050 85bb8d7f585e4b00144b49792c10bd08 477 Pfam PF00324 Amino acid permease 16 460 9.3E-134 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CLSA_c06930 16960c3d02e5492bf2c2fa254bde5291 415 Gene3D G3DSA:3.30.565.10 259 412 4.6E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06930 16960c3d02e5492bf2c2fa254bde5291 415 SUPERFAMILY SSF55874 274 398 1.43E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06930 16960c3d02e5492bf2c2fa254bde5291 415 Pfam PF14501 GHKL domain 307 409 5.6E-10 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLSA_c45510 016be0a542225ec50976913b96501ecd 125 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 114 4.9E-23 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLSA_c45510 016be0a542225ec50976913b96501ecd 125 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 115 15.346 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLSA_c45510 016be0a542225ec50976913b96501ecd 125 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 90 6.0E-12 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLSA_c45510 016be0a542225ec50976913b96501ecd 125 Gene3D G3DSA:3.30.230.10 2 120 1.0E-30 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLSA_c45510 016be0a542225ec50976913b96501ecd 125 Pfam PF00825 Ribonuclease P 3 112 2.8E-27 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLSA_c45510 016be0a542225ec50976913b96501ecd 125 SUPERFAMILY SSF54211 3 118 2.53E-25 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CLSA_c24200 00e9cd97af5f1dae4aa2c749dc5bf470 122 SUPERFAMILY SSF52172 3 121 4.98E-35 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c24200 00e9cd97af5f1dae4aa2c749dc5bf470 122 Gene3D G3DSA:3.40.50.12740 5 121 3.4E-33 T 12-10-2018 CLSA_c24200 00e9cd97af5f1dae4aa2c749dc5bf470 122 Pfam PF00072 Response regulator receiver domain 6 116 6.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24200 00e9cd97af5f1dae4aa2c749dc5bf470 122 SMART SM00448 4 116 6.2E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c32030 4c69b0fb82ce662f7dbaa5d077542c16 172 SUPERFAMILY SSF52540 3 170 1.94E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c32030 4c69b0fb82ce662f7dbaa5d077542c16 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 166 3.6E-30 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CLSA_c32030 4c69b0fb82ce662f7dbaa5d077542c16 172 Gene3D G3DSA:3.40.50.300 3 169 5.8E-36 T 12-10-2018 CLSA_c32030 4c69b0fb82ce662f7dbaa5d077542c16 172 PIRSF PIRSF006135 1 172 1.1E-37 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CLSA_c18120 edfb39b48b8879ad6df90775567c06ba 210 Pfam PF06161 Protein of unknown function (DUF975) 1 125 1.1E-11 T 12-10-2018 IPR010380 Protein of unknown function DUF975 CLSA_c18120 edfb39b48b8879ad6df90775567c06ba 210 Pfam PF06161 Protein of unknown function (DUF975) 105 202 1.5E-26 T 12-10-2018 IPR010380 Protein of unknown function DUF975 CLSA_c31970 d4f87cdaf4de3fa46c71b5264f19fa57 220 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 5 217 4.2E-44 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 CLSA_c31970 d4f87cdaf4de3fa46c71b5264f19fa57 220 SUPERFAMILY SSF52402 1 216 1.52E-62 T 12-10-2018 CLSA_c31970 d4f87cdaf4de3fa46c71b5264f19fa57 220 Gene3D G3DSA:3.40.50.620 1 141 1.7E-30 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c31970 d4f87cdaf4de3fa46c71b5264f19fa57 220 Pfam PF01902 Diphthamide synthase 5 217 1.4E-43 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 CLSA_c31970 d4f87cdaf4de3fa46c71b5264f19fa57 220 Gene3D G3DSA:3.90.1490.10 142 219 5.2E-11 T 12-10-2018 CLSA_c05870 17cb7ead081fab50b833ff55b1089514 180 Gene3D G3DSA:1.20.1260.10 53 178 1.8E-25 T 12-10-2018 IPR012347 Ferritin-like CLSA_c05870 17cb7ead081fab50b833ff55b1089514 180 Pfam PF02915 Rubrerythrin 61 174 1.2E-13 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLSA_c05870 17cb7ead081fab50b833ff55b1089514 180 SUPERFAMILY SSF57802 1 44 2.19E-12 T 12-10-2018 CLSA_c05870 17cb7ead081fab50b833ff55b1089514 180 Gene3D G3DSA:2.20.28.10 1 35 4.1E-15 T 12-10-2018 CLSA_c05870 17cb7ead081fab50b833ff55b1089514 180 SUPERFAMILY SSF47240 54 179 1.6E-32 T 12-10-2018 IPR009078 Ferritin-like superfamily CLSA_c02340 24e487a314cc7fba726cb4e1212f936d 289 SUPERFAMILY SSF52540 3 237 1.54E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c02340 24e487a314cc7fba726cb4e1212f936d 289 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 1.4E-124 T 12-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 CLSA_c02340 24e487a314cc7fba726cb4e1212f936d 289 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c02340 24e487a314cc7fba726cb4e1212f936d 289 SMART SM00382 32 222 2.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c02340 24e487a314cc7fba726cb4e1212f936d 289 Gene3D G3DSA:3.40.50.300 1 288 1.9E-84 T 12-10-2018 CLSA_c02340 24e487a314cc7fba726cb4e1212f936d 289 Pfam PF00005 ABC transporter 23 173 8.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c26450 e665ad0dcb3ea69f0efc240a9363a985 168 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 160 1.7E-40 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CLSA_c26450 e665ad0dcb3ea69f0efc240a9363a985 168 SUPERFAMILY SSF52540 7 120 1.68E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c26450 e665ad0dcb3ea69f0efc240a9363a985 168 Gene3D G3DSA:3.40.50.300 6 167 2.5E-48 T 12-10-2018 CLSA_c26450 e665ad0dcb3ea69f0efc240a9363a985 168 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 137 9.7E-41 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CLSA_c10640 09dff1d0599717f09ce9d3b8fce8f95b 242 Gene3D G3DSA:3.30.70.20 4 63 4.4E-11 T 12-10-2018 CLSA_c10640 09dff1d0599717f09ce9d3b8fce8f95b 242 SUPERFAMILY SSF54862 4 64 7.3E-15 T 12-10-2018 CLSA_c10640 09dff1d0599717f09ce9d3b8fce8f95b 242 Pfam PF00037 4Fe-4S binding domain 6 29 3.1E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c17490 56909472e16ad8b633307aa30bd652cd 162 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 153 9.9E-17 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain CLSA_c17490 56909472e16ad8b633307aa30bd652cd 162 Gene3D G3DSA:3.40.50.1110 1 162 5.4E-45 T 12-10-2018 IPR036514 SGNH hydrolase superfamily CLSA_c17490 56909472e16ad8b633307aa30bd652cd 162 SUPERFAMILY SSF52266 2 157 2.14E-29 T 12-10-2018 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Gene3D G3DSA:3.30.420.40 161 339 1.6E-144 T 12-10-2018 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 576 3.8E-288 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 611 36.931 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Gene3D G3DSA:1.20.1270.10 479 579 1.3E-28 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Gene3D G3DSA:2.60.34.10 349 477 1.8E-57 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Pfam PF00012 Hsp70 protein 78 576 6.5E-223 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Gene3D G3DSA:3.30.420.40 5 348 1.6E-144 T 12-10-2018 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 SUPERFAMILY SSF100920 356 512 6.02E-62 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 SUPERFAMILY SSF100934 479 576 2.16E-15 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 SUPERFAMILY SSF53067 2 159 2.59E-59 T 12-10-2018 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 Gene3D G3DSA:3.90.640.10 200 281 1.6E-144 T 12-10-2018 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 54 62 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 306 322 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 360 379 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 337 357 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 174 184 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 441 457 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 PRINTS PR00301 70kDa heat shock protein signature 114 134 7.5E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLSA_c10850 4e5247ea0a89cb1e1b4e6da981681c2e 614 SUPERFAMILY SSF53067 164 354 2.41E-68 T 12-10-2018 CLSA_c12760 faed05b10ebc342627eaa16c8465f715 334 SMART SM00481 21 103 5.2E-5 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLSA_c12760 faed05b10ebc342627eaa16c8465f715 334 Gene3D G3DSA:3.20.20.140 3 241 4.7E-41 T 12-10-2018 CLSA_c12760 faed05b10ebc342627eaa16c8465f715 334 SUPERFAMILY SSF89550 18 236 1.82E-22 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c10770 dd5a056ef63d73e403191bac3e40bd76 358 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 110 352 8.5E-70 T 12-10-2018 IPR010897 Sporulation stage II, protein P CLSA_c10770 dd5a056ef63d73e403191bac3e40bd76 358 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 166 356 2.6E-55 T 12-10-2018 IPR010897 Sporulation stage II, protein P CLSA_c08400 72635c9bd43c002d403a5b45edf6d7ab 180 Pfam PF14136 Domain of unknown function (DUF4303) 13 165 1.7E-43 T 12-10-2018 IPR025409 Protein of unknown function DUF4303 CLSA_c02350 38aab5363accc837244171eaae30571d 267 Pfam PF02361 Cobalt transport protein 14 235 2.3E-52 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CLSA_c02350 38aab5363accc837244171eaae30571d 267 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 33.974 T 12-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 CLSA_c31550 463402d4532ed621f83b160307d9464f 185 Pfam PF12983 Protein of unknown function (DUF3867) 3 185 1.6E-81 T 12-10-2018 IPR024218 Protein of unknown function DUF3867 CLSA_c21480 feea0e1682a8d17590a1ae615f728c32 195 Gene3D G3DSA:1.20.58.1690 107 186 1.7E-20 T 12-10-2018 IPR038434 YARHG domain superfamily CLSA_c21480 feea0e1682a8d17590a1ae615f728c32 195 SMART SM01324 108 188 1.5E-24 T 12-10-2018 IPR025582 YARHG domain CLSA_c21480 feea0e1682a8d17590a1ae615f728c32 195 Pfam PF13308 YARHG domain 110 187 4.8E-24 T 12-10-2018 IPR025582 YARHG domain CLSA_c23500 c681379897804f30ae1715be7aad5352 288 Gene3D G3DSA:3.20.20.70 1 288 1.1E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c23500 c681379897804f30ae1715be7aad5352 288 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 287 6.5E-97 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c23500 c681379897804f30ae1715be7aad5352 288 SUPERFAMILY SSF51569 4 288 6.59E-97 T 12-10-2018 CLSA_c23500 c681379897804f30ae1715be7aad5352 288 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 288 1.7E-117 T 12-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CLSA_c23500 c681379897804f30ae1715be7aad5352 288 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 132 143 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c23500 c681379897804f30ae1715be7aad5352 288 PIRSF PIRSF001359 1 288 1.1E-113 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c23500 c681379897804f30ae1715be7aad5352 288 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 288 5.0E-99 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLSA_c42270 15c77575d7f53131bc7cb9aa322e8725 193 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 179 2.2E-79 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLSA_c42270 15c77575d7f53131bc7cb9aa322e8725 193 Gene3D G3DSA:2.60.120.10 1 184 5.5E-78 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c42270 15c77575d7f53131bc7cb9aa322e8725 193 SUPERFAMILY SSF51182 4 182 4.09E-79 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c42270 15c77575d7f53131bc7cb9aa322e8725 193 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 181 3.6E-84 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLSA_c42270 15c77575d7f53131bc7cb9aa322e8725 193 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 180 9.0E-75 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLSA_c31010 1cbddf61162740b4f0369ef71bae2205 432 Gene3D G3DSA:2.120.10.30 197 388 9.0E-6 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CLSA_c31010 1cbddf61162740b4f0369ef71bae2205 432 SUPERFAMILY SSF50952 49 400 8.11E-14 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CLSA_c04770 9ad02ce52d579714b47eb54bcd5b8a4b 379 Gene3D G3DSA:3.40.190.10 146 351 4.4E-19 T 12-10-2018 CLSA_c04770 9ad02ce52d579714b47eb54bcd5b8a4b 379 Pfam PF13416 Bacterial extracellular solute-binding protein 53 325 3.9E-13 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein CLSA_c04770 9ad02ce52d579714b47eb54bcd5b8a4b 379 SUPERFAMILY SSF53850 43 338 1.03E-18 T 12-10-2018 CLSA_c04770 9ad02ce52d579714b47eb54bcd5b8a4b 379 Gene3D G3DSA:3.40.190.10 55 335 4.4E-19 T 12-10-2018 CLSA_c06380 17a311e0925094fbdabc523bfd49dd7d 233 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 2 219 1.3E-64 T 12-10-2018 IPR018768 Domain of unknown function DUF2344 CLSA_c06380 17a311e0925094fbdabc523bfd49dd7d 233 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 2 189 2.8E-56 T 12-10-2018 IPR018768 Domain of unknown function DUF2344 CLSA_c09350 ff09b4983fb76c6e58ea79d7c1a8827f 103 Pfam PF12840 Helix-turn-helix domain 5 80 2.0E-8 T 12-10-2018 CLSA_c09350 ff09b4983fb76c6e58ea79d7c1a8827f 103 Gene3D G3DSA:1.10.10.10 1 102 3.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c09350 ff09b4983fb76c6e58ea79d7c1a8827f 103 SMART SM00418 5 101 0.0015 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLSA_c09350 ff09b4983fb76c6e58ea79d7c1a8827f 103 SUPERFAMILY SSF46785 4 99 8.01E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c45400 066bdc65bdffe2f8360343d3f2d476bf 192 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 34 173 2.8E-64 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 CLSA_c45400 066bdc65bdffe2f8360343d3f2d476bf 192 SUPERFAMILY SSF53163 7 187 1.7E-45 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily CLSA_c45400 066bdc65bdffe2f8360343d3f2d476bf 192 Pfam PF06866 Protein of unknown function (DUF1256) 14 171 5.0E-63 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 Pfam PF00512 His Kinase A (phospho-acceptor) domain 88 145 4.0E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 SUPERFAMILY SSF55874 144 306 8.12E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 Gene3D G3DSA:1.10.287.130 24 147 1.5E-12 T 12-10-2018 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 SMART SM00387 199 308 2.3E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 Gene3D G3DSA:3.30.565.10 158 307 1.7E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 202 306 2.4E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 SMART SM00388 87 153 1.2E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 286 5.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 249 5.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 263 5.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 305 5.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c06250 aede383e1472770e50f78a9d00c5d1f0 308 SUPERFAMILY SSF47384 71 153 8.44E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CLSA_c27570 0faed7fd5b555e448ad9e7318873e277 216 SUPERFAMILY SSF50249 8 204 1.93E-36 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c27570 0faed7fd5b555e448ad9e7318873e277 216 Gene3D G3DSA:2.40.50.140 1 99 4.7E-19 T 12-10-2018 CLSA_c27570 0faed7fd5b555e448ad9e7318873e277 216 Gene3D G3DSA:2.40.50.140 100 204 5.3E-24 T 12-10-2018 CLSA_c27570 0faed7fd5b555e448ad9e7318873e277 216 Pfam PF00436 Single-strand binding protein family 107 202 1.0E-17 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 SMART SM00283 279 569 8.5E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 Gene3D G3DSA:1.10.287.950 273 569 2.0E-55 T 12-10-2018 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 Gene3D G3DSA:1.20.1480.50 171 269 8.7E-8 T 12-10-2018 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 5.1E-39 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 SMART SM00304 212 264 7.7E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 359 520 1.3E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 SUPERFAMILY SSF58104 232 569 4.01E-58 T 12-10-2018 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 307 336 2.6E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c34090 5f04b12f9d3d7f0845bcb31c87d6802c 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 2.6E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c38250 cabe708ca0cc310d776bd459d7be128f 441 PIRSF PIRSF006060 1 441 7.6E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c38250 cabe708ca0cc310d776bd459d7be128f 441 Pfam PF13520 Amino acid permease 11 401 2.3E-42 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c38250 cabe708ca0cc310d776bd459d7be128f 441 TIGRFAM TIGR00908 2A0305: ethanolamine permease 2 426 1.4E-176 T 12-10-2018 IPR004757 Ethanolamine permease CLSA_c38250 cabe708ca0cc310d776bd459d7be128f 441 Gene3D G3DSA:1.20.1740.10 3 438 4.5E-68 T 12-10-2018 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 Pfam PF01680 SOR/SNZ family 6 209 7.0E-109 T 12-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 SUPERFAMILY SSF51366 15 264 3.53E-65 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 ProSitePatterns PS01235 PdxS/SNZ family signature. 202 220 - T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 6 288 5.2E-148 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 PIRSF PIRSF029271 1 289 3.1E-148 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 1 289 50.608 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 CLSA_c44910 81c0f608a1017ad6a26b566c9c459ecf 289 Gene3D G3DSA:3.20.20.70 2 289 2.2E-145 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 Gene3D G3DSA:3.90.1530.30 19 81 9.4E-25 T 12-10-2018 CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 SUPERFAMILY SSF110849 5 97 3.66E-27 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 2 180 8.2E-48 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 4 257 1.5E-97 T 12-10-2018 IPR023705 Nucleoid occlusion protein CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 SUPERFAMILY SSF109709 88 195 8.11E-32 T 12-10-2018 CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 Pfam PF02195 ParB-like nuclease domain 7 94 6.4E-22 T 12-10-2018 IPR003115 ParB/Sulfiredoxin CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 Gene3D G3DSA:1.10.10.2830 82 196 7.7E-36 T 12-10-2018 CLSA_c45440 cb905831f9ac676d7617e50c58a9dac9 260 SMART SM00470 6 95 3.5E-26 T 12-10-2018 IPR003115 ParB/Sulfiredoxin CLSA_c05740 8df6ff1b094b66025b10012b3dd4c52d 300 Gene3D G3DSA:3.40.50.1980 44 198 7.6E-26 T 12-10-2018 CLSA_c05740 8df6ff1b094b66025b10012b3dd4c52d 300 Pfam PF01297 Zinc-uptake complex component A periplasmic 45 222 1.2E-21 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CLSA_c05740 8df6ff1b094b66025b10012b3dd4c52d 300 SUPERFAMILY SSF53807 40 286 2.75E-35 T 12-10-2018 CLSA_c26940 81aabdb427976c2322c370b7e9a47326 429 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 104 423 6.5E-108 T 12-10-2018 IPR014194 Sporulation stage III, protein AE CLSA_c26940 81aabdb427976c2322c370b7e9a47326 429 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 61 423 1.0E-120 T 12-10-2018 IPR014194 Sporulation stage III, protein AE CLSA_c22010 c3335e6cd8da4a7cdb09524183ad0782 249 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c22010 c3335e6cd8da4a7cdb09524183ad0782 249 SMART SM00382 34 221 7.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c22010 c3335e6cd8da4a7cdb09524183ad0782 249 SUPERFAMILY SSF52540 9 243 2.08E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22010 c3335e6cd8da4a7cdb09524183ad0782 249 Gene3D G3DSA:3.40.50.300 9 248 3.6E-80 T 12-10-2018 CLSA_c22010 c3335e6cd8da4a7cdb09524183ad0782 249 Pfam PF00005 ABC transporter 25 173 3.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c22010 c3335e6cd8da4a7cdb09524183ad0782 249 PIRSF PIRSF039085 6 249 2.4E-105 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLSA_c33610 8a290df852f8c19a523b57058fe2f7a2 246 Gene3D G3DSA:2.40.400.10 13 244 7.1E-86 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CLSA_c33610 8a290df852f8c19a523b57058fe2f7a2 246 Hamap MF_00597 Probable acetoacetate decarboxylase [adc]. 6 244 57.837 T 12-10-2018 IPR023653 Acetoacetate decarboxylase, bacterial GO:0016831 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CLSA_c33610 8a290df852f8c19a523b57058fe2f7a2 246 Pfam PF06314 Acetoacetate decarboxylase (ADC) 12 243 2.9E-71 T 12-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CLSA_c33610 8a290df852f8c19a523b57058fe2f7a2 246 SUPERFAMILY SSF160104 4 243 3.53E-82 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 ProSitePatterns PS00194 Thioredoxin family active site. 19 37 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 SUPERFAMILY SSF52833 2 101 8.88E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 Gene3D G3DSA:3.40.30.10 1 102 7.2E-33 T 12-10-2018 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 TIGRFAM TIGR01068 thioredoxin: thioredoxin 5 100 7.8E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 PRINTS PR00421 Thioredoxin family signature 18 26 1.2E-8 T 12-10-2018 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 PRINTS PR00421 Thioredoxin family signature 26 35 1.2E-8 T 12-10-2018 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 PRINTS PR00421 Thioredoxin family signature 66 77 1.2E-8 T 12-10-2018 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 PIRSF PIRSF000077 1 102 1.8E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLSA_c10370 9ff41410a22bdb5f4c055769c72f8c61 102 Pfam PF00085 Thioredoxin 3 98 1.6E-30 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 CLSA_c22270 f043906d133e357d711fe613709b4e98 544 Pfam PF16949 Putative ATP-binding cassette 70 458 1.9E-9 T 12-10-2018 IPR031599 Putative ATP-binding cassette CLSA_c13300 3bf31f66f8956e1dc8dfa3ea58b03bdc 92 Pfam PF06949 Protein of unknown function (DUF1292) 13 85 1.0E-12 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 CLSA_c13300 3bf31f66f8956e1dc8dfa3ea58b03bdc 92 Hamap MF_01448 UPF0473 protein . 4 86 12.443 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 183 2.1E-55 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 Gene3D G3DSA:3.40.50.1240 1 187 1.2E-57 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 SMART SM00855 2 157 1.9E-22 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 PRINTS PR00991 6-phosphofructo-2-kinase family signature 3 25 8.2E-7 T 12-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 PRINTS PR00991 6-phosphofructo-2-kinase family signature 86 102 8.2E-7 T 12-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 SUPERFAMILY SSF53254 1 184 1.09E-56 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c34470 8e7db259f886dd7728b1856642eafe09 189 PIRSF PIRSF000709 1 186 1.9E-32 T 12-10-2018 CLSA_c21320 59f8d63c2786db89a937e1775f7c2a27 112 Gene3D G3DSA:1.20.1440.50 19 109 1.7E-19 T 12-10-2018 IPR023130 Ta0600-like superfamily CLSA_c21320 59f8d63c2786db89a937e1775f7c2a27 112 Pfam PF08951 Enterocin A Immunity 25 95 7.7E-20 T 12-10-2018 IPR015046 Enterocin A Immunity CLSA_c21320 59f8d63c2786db89a937e1775f7c2a27 112 SUPERFAMILY SSF109797 20 112 9.42E-24 T 12-10-2018 CLSA_c09360 7a7b2bee128f9342f69f982ac0d6a559 352 Gene3D G3DSA:3.20.20.70 1 350 2.3E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c09360 7a7b2bee128f9342f69f982ac0d6a559 352 SUPERFAMILY SSF51395 1 333 1.13E-92 T 12-10-2018 CLSA_c09360 7a7b2bee128f9342f69f982ac0d6a559 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 320 1.6E-63 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLSA_c26030 db969c9b702b5e4a6e2588aa07ad5da5 122 Gene3D G3DSA:2.10.270.10 1 116 1.8E-32 T 12-10-2018 CLSA_c26030 db969c9b702b5e4a6e2588aa07ad5da5 122 Pfam PF01473 Putative cell wall binding repeat 3 20 0.0011 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c26030 db969c9b702b5e4a6e2588aa07ad5da5 122 Pfam PF01473 Putative cell wall binding repeat 63 80 0.014 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c26030 db969c9b702b5e4a6e2588aa07ad5da5 122 Pfam PF01473 Putative cell wall binding repeat 23 41 1.6E-7 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c26030 db969c9b702b5e4a6e2588aa07ad5da5 122 SUPERFAMILY SSF69360 1 104 2.62E-32 T 12-10-2018 CLSA_c07580 7edcf116b05864a6e7dbd16c986604d8 229 Gene3D G3DSA:3.40.225.10 1 228 5.0E-63 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c07580 7edcf116b05864a6e7dbd16c986604d8 229 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 3.2E-45 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c07580 7edcf116b05864a6e7dbd16c986604d8 229 SMART SM01007 7 195 2.0E-69 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c07580 7edcf116b05864a6e7dbd16c986604d8 229 SUPERFAMILY SSF53639 1 220 2.55E-69 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c34810 f66377d5eb70f646817082771447edd5 466 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 298 448 7.1E-27 T 12-10-2018 IPR006512 YidE/YbjL duplication CLSA_c34810 f66377d5eb70f646817082771447edd5 466 Pfam PF06826 Predicted Permease Membrane Region 15 242 2.5E-21 T 12-10-2018 IPR006512 YidE/YbjL duplication CLSA_c34810 f66377d5eb70f646817082771447edd5 466 Pfam PF06826 Predicted Permease Membrane Region 291 461 8.1E-39 T 12-10-2018 IPR006512 YidE/YbjL duplication CLSA_c03320 7a54ef58137da50dce19bf970e46d543 241 Gene3D G3DSA:3.30.565.40 36 154 4.9E-23 T 12-10-2018 CLSA_c03320 7a54ef58137da50dce19bf970e46d543 241 Pfam PF13739 Domain of unknown function (DUF4163) 45 140 5.5E-20 T 12-10-2018 IPR025303 Deacetylase PdaC CLSA_c03320 7a54ef58137da50dce19bf970e46d543 241 Gene3D G3DSA:3.90.640.20 156 240 1.6E-25 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily CLSA_c03320 7a54ef58137da50dce19bf970e46d543 241 Pfam PF11738 Protein of unknown function (DUF3298) 158 233 6.1E-22 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 CLSA_c32950 0733c0877bdadc6fd54861321464cba1 493 Pfam PF02952 L-fucose isomerase, C-terminal domain 348 474 1.3E-27 T 12-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CLSA_c32950 0733c0877bdadc6fd54861321464cba1 493 SUPERFAMILY SSF53743 1 314 2.62E-64 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 CLSA_c32250 158f1ad5df6874f2c443100b3b68ec2f 182 Pfam PF02659 Putative manganese efflux pump 38 178 4.2E-13 T 12-10-2018 IPR003810 Putative manganese efflux pump CLSA_c09240 3bf2cb642da30811b4ad858c66f2881b 274 Pfam PF17409 MoaF C-terminal domain 157 272 5.4E-48 T 12-10-2018 IPR035348 MoaF, C-terminal domain CLSA_c09240 3bf2cb642da30811b4ad858c66f2881b 274 Pfam PF10703 MoaF N-terminal domain 8 116 2.0E-28 T 12-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal CLSA_c09240 3bf2cb642da30811b4ad858c66f2881b 274 Gene3D G3DSA:2.40.128.20 153 248 8.9E-6 T 12-10-2018 IPR012674 Calycin CLSA_c18720 f8b2261ab204734c3e1d706501fa0bcb 466 PIRSF PIRSF006060 2 465 9.9E-67 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c18720 f8b2261ab204734c3e1d706501fa0bcb 466 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CLSA_c18720 f8b2261ab204734c3e1d706501fa0bcb 466 Gene3D G3DSA:1.20.1740.10 11 465 2.8E-61 T 12-10-2018 CLSA_c18720 f8b2261ab204734c3e1d706501fa0bcb 466 Pfam PF00324 Amino acid permease 19 451 2.7E-110 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CLSA_c11690 e155566e5eb1a35ebc29dbce02a71b37 380 PIRSF PIRSF006078 5 380 2.4E-139 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLSA_c11690 e155566e5eb1a35ebc29dbce02a71b37 380 Pfam PF02595 Glycerate kinase family 7 377 3.5E-150 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLSA_c11690 e155566e5eb1a35ebc29dbce02a71b37 380 SUPERFAMILY SSF110738 6 379 3.4E-139 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 CLSA_c11690 e155566e5eb1a35ebc29dbce02a71b37 380 Gene3D G3DSA:3.40.50.10350 6 366 7.4E-139 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold CLSA_c11690 e155566e5eb1a35ebc29dbce02a71b37 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 7 379 4.5E-160 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLSA_c11690 e155566e5eb1a35ebc29dbce02a71b37 380 Gene3D G3DSA:3.90.1510.10 46 280 7.4E-139 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 CLSA_c06140 d1b9ad8d9b4c624fcb9bb3b3590e16e6 163 Pfam PF04093 rod shape-determining protein MreD 7 147 4.0E-12 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CLSA_c06140 d1b9ad8d9b4c624fcb9bb3b3590e16e6 163 PIRSF PIRSF037497 1 163 2.2E-34 T 12-10-2018 IPR017225 Cell shape-determining protein MreD, predicted CLSA_c06140 d1b9ad8d9b4c624fcb9bb3b3590e16e6 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 3 144 1.2E-17 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CLSA_c02560 bae272eb7dab27ea435a575607f7bc6d 534 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 266 9.6E-9 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c02560 bae272eb7dab27ea435a575607f7bc6d 534 Gene3D G3DSA:3.30.70.2700 1 80 4.8E-21 T 12-10-2018 CLSA_c02560 bae272eb7dab27ea435a575607f7bc6d 534 SUPERFAMILY SSF51905 99 527 1.56E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c02560 bae272eb7dab27ea435a575607f7bc6d 534 PIRSF PIRSF038984 1 532 4.1E-246 T 12-10-2018 IPR028348 FAD dependent protein CLSA_c02560 bae272eb7dab27ea435a575607f7bc6d 534 Gene3D G3DSA:3.50.50.60 85 301 1.8E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c02560 bae272eb7dab27ea435a575607f7bc6d 534 Gene3D G3DSA:3.50.50.60 452 531 5.3E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c24500 a793779fe20e00b36249916bbf40fb18 249 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 3 249 7.1E-78 T 12-10-2018 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE CLSA_c27150 4aaccd9fd9f1b3e804924bb6823242a7 579 Gene3D G3DSA:2.30.310.10 1 167 3.4E-58 T 12-10-2018 CLSA_c27150 4aaccd9fd9f1b3e804924bb6823242a7 579 Pfam PF05670 Domain of unknown function (DUF814) 462 547 1.1E-24 T 12-10-2018 IPR008532 Domain of unknown function DUF814 CLSA_c27150 4aaccd9fd9f1b3e804924bb6823242a7 579 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 454 4.0E-139 T 12-10-2018 CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 Gene3D G3DSA:3.10.105.10 293 519 4.5E-181 T 12-10-2018 CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 PIRSF PIRSF002741 3 550 9.0E-126 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 Gene3D G3DSA:3.90.76.10 71 193 4.5E-181 T 12-10-2018 CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 SUPERFAMILY SSF53850 32 545 5.97E-148 T 12-10-2018 CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 Gene3D G3DSA:3.40.190.10 45 531 4.5E-181 T 12-10-2018 CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 468 8.5E-96 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain CLSA_c43980 ec61097269775b87d536b5ca96231c31 550 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site CLSA_c21610 abdde13fd772d463cc80eec0df10097a 287 SMART SM00382 30 222 4.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c21610 abdde13fd772d463cc80eec0df10097a 287 SUPERFAMILY SSF52540 4 234 1.07E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21610 abdde13fd772d463cc80eec0df10097a 287 Gene3D G3DSA:3.40.50.300 3 244 1.1E-66 T 12-10-2018 CLSA_c21610 abdde13fd772d463cc80eec0df10097a 287 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c21610 abdde13fd772d463cc80eec0df10097a 287 Pfam PF00005 ABC transporter 21 174 4.3E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c28510 32af9b2f87fa79eddf9d2a89545001cb 387 Gene3D G3DSA:3.30.70.20 2 67 3.3E-10 T 12-10-2018 CLSA_c28510 32af9b2f87fa79eddf9d2a89545001cb 387 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 67 135 1.7E-4 T 12-10-2018 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal CLSA_c28510 32af9b2f87fa79eddf9d2a89545001cb 387 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 8 19 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLSA_c28510 32af9b2f87fa79eddf9d2a89545001cb 387 Pfam PF12838 4Fe-4S dicluster domain 7 53 3.6E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLSA_c28510 32af9b2f87fa79eddf9d2a89545001cb 387 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 150 315 2.8E-33 T 12-10-2018 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal CLSA_c28510 32af9b2f87fa79eddf9d2a89545001cb 387 SUPERFAMILY SSF54862 4 53 2.19E-12 T 12-10-2018 CLSA_c27050 1cad2517590429136f86c36026facd07 154 Pfam PF15980 Putative Competence protein ComGF 43 149 5.0E-14 T 12-10-2018 IPR016977 Competence operon G, ComGF CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 30 46 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 118 139 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 265 285 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 60 79 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 176 196 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 357 380 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 148 170 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 PRINTS PR01035 Tetracycline resistance protein signature 91 115 7.0E-41 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 Gene3D G3DSA:1.20.1250.20 14 405 2.7E-69 T 12-10-2018 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 Pfam PF07690 Major Facilitator Superfamily 25 273 3.1E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c18920 58c18f60ee7cd40e793b26add76029c5 408 SUPERFAMILY SSF103473 17 403 1.02E-66 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c28760 26f9de27e7fc5f95eaf1fe15027020be 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 374 54.141 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLSA_c28760 26f9de27e7fc5f95eaf1fe15027020be 379 Gene3D G3DSA:3.20.20.105 2 379 4.5E-163 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLSA_c28760 26f9de27e7fc5f95eaf1fe15027020be 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 375 9.6E-154 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLSA_c28760 26f9de27e7fc5f95eaf1fe15027020be 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 370 2.1E-89 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLSA_c28760 26f9de27e7fc5f95eaf1fe15027020be 379 SUPERFAMILY SSF51713 4 373 2.09E-150 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLSA_c28760 26f9de27e7fc5f95eaf1fe15027020be 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 375 2.2E-148 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PIRSF PIRSF002869 2 504 2.4E-113 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 462 16.055 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PRINTS PR01806 Virulence factor MviN signature 37 56 2.6E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PRINTS PR01806 Virulence factor MviN signature 156 177 2.6E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PRINTS PR01806 Virulence factor MviN signature 353 372 2.6E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PRINTS PR01806 Virulence factor MviN signature 132 156 2.6E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PRINTS PR01806 Virulence factor MviN signature 255 281 2.6E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 PRINTS PR01806 Virulence factor MviN signature 405 422 2.6E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 7 498 1.6E-99 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c12320 8cb64a2bb3be236c4cf7f3a2fff08210 508 Pfam PF03023 MviN-like protein 32 461 1.0E-74 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CLSA_c00160 a1e2be693905842415201f91288db6f7 75 Gene3D G3DSA:3.10.530.10 2 72 3.5E-29 T 12-10-2018 IPR036593 CPE0013-like superfamily CLSA_c00160 a1e2be693905842415201f91288db6f7 75 Pfam PF07892 Protein of unknown function (DUF1667) 3 72 8.2E-19 T 12-10-2018 IPR012460 Protein of unknown function DUF1667 CLSA_c00160 a1e2be693905842415201f91288db6f7 75 SUPERFAMILY SSF160148 4 74 3.66E-23 T 12-10-2018 IPR036593 CPE0013-like superfamily CLSA_c32410 e1b28065822a64766309a939fa8fc254 262 Gene3D G3DSA:3.10.310.50 32 175 2.4E-44 T 12-10-2018 CLSA_c32410 e1b28065822a64766309a939fa8fc254 262 Pfam PF04536 TPM domain 43 164 5.4E-33 T 12-10-2018 IPR007621 TPM domain CLSA_c19190 317f44e2d892aa8f94bad2d7103d2764 386 Gene3D G3DSA:3.30.457.10 76 157 9.3E-6 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily CLSA_c19190 317f44e2d892aa8f94bad2d7103d2764 386 Pfam PF01473 Putative cell wall binding repeat 185 202 3.4E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c19190 317f44e2d892aa8f94bad2d7103d2764 386 Pfam PF01473 Putative cell wall binding repeat 205 222 2.2E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c19190 317f44e2d892aa8f94bad2d7103d2764 386 Gene3D G3DSA:2.10.270.10 158 241 3.8E-21 T 12-10-2018 CLSA_c19190 317f44e2d892aa8f94bad2d7103d2764 386 SUPERFAMILY SSF69360 93 240 1.7E-20 T 12-10-2018 CLSA_c19190 317f44e2d892aa8f94bad2d7103d2764 386 Pfam PF07833 Copper amine oxidase N-terminal domain 73 155 3.9E-13 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal CLSA_c42470 856576a3a8950c8b775bebada84f23b4 552 Pfam PF00149 Calcineurin-like phosphoesterase 192 417 4.2E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c42470 856576a3a8950c8b775bebada84f23b4 552 SUPERFAMILY SSF56300 188 535 7.6E-30 T 12-10-2018 CLSA_c42470 856576a3a8950c8b775bebada84f23b4 552 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 54 184 5.8E-14 T 12-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 CLSA_c42470 856576a3a8950c8b775bebada84f23b4 552 Gene3D G3DSA:3.60.21.10 214 505 3.1E-21 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c42470 856576a3a8950c8b775bebada84f23b4 552 SUPERFAMILY SSF49363 147 184 4.71E-6 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 SMART SM00862 145 220 9.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 Gene3D G3DSA:1.10.10.10 125 228 2.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 Gene3D G3DSA:3.40.50.2300 2 124 1.6E-37 T 12-10-2018 CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 SUPERFAMILY SSF52172 3 166 9.39E-40 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.1E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c21680 82acb7ffade65ff2d518ead66e1d4d55 228 SMART SM00448 2 112 7.6E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c24780 3625aa7c9c2e9cafa1d1c318b65a3805 302 SUPERFAMILY SSF103481 43 143 4.84E-11 T 12-10-2018 CLSA_c24780 3625aa7c9c2e9cafa1d1c318b65a3805 302 SUPERFAMILY SSF103481 208 287 1.96E-7 T 12-10-2018 CLSA_c24780 3625aa7c9c2e9cafa1d1c318b65a3805 302 TIGRFAM TIGR00688 rarD: protein RarD 9 262 9.7E-72 T 12-10-2018 IPR004626 RarD protein GO:0005887 CLSA_c24780 3625aa7c9c2e9cafa1d1c318b65a3805 302 Pfam PF00892 EamA-like transporter family 9 143 1.7E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c44650 4ba0b89930fce3e10cfc523efbff4463 221 SMART SM00563 55 169 7.4E-32 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CLSA_c44650 4ba0b89930fce3e10cfc523efbff4463 221 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 38 166 5.2E-36 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CLSA_c44650 4ba0b89930fce3e10cfc523efbff4463 221 Pfam PF01553 Acyltransferase 40 166 3.8E-29 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CLSA_c44650 4ba0b89930fce3e10cfc523efbff4463 221 SUPERFAMILY SSF69593 19 219 1.16E-46 T 12-10-2018 CLSA_c16840 6dfc19c53b535e2235c31d32e94f7762 195 Pfam PF01966 HD domain 26 147 1.4E-23 T 12-10-2018 IPR006674 HD domain CLSA_c16840 6dfc19c53b535e2235c31d32e94f7762 195 Gene3D G3DSA:1.10.3210.10 3 191 3.2E-68 T 12-10-2018 CLSA_c16840 6dfc19c53b535e2235c31d32e94f7762 195 SUPERFAMILY SSF109604 12 185 1.36E-42 T 12-10-2018 CLSA_c16840 6dfc19c53b535e2235c31d32e94f7762 195 SMART SM00471 21 156 3.7E-11 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c24910 bc4dafcefaba6703896873a7cee8120d 173 Gene3D G3DSA:3.40.50.850 1 165 2.5E-39 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c24910 bc4dafcefaba6703896873a7cee8120d 173 Pfam PF00857 Isochorismatase family 2 131 5.4E-28 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 CLSA_c24910 bc4dafcefaba6703896873a7cee8120d 173 SUPERFAMILY SSF52499 2 171 1.7E-37 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 PRINTS PR00991 6-phosphofructo-2-kinase family signature 85 101 8.5E-6 T 12-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 PRINTS PR00991 6-phosphofructo-2-kinase family signature 5 27 8.5E-6 T 12-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 SUPERFAMILY SSF53254 1 206 8.25E-57 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 PIRSF PIRSF000709 1 169 4.4E-20 T 12-10-2018 CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 188 9.2E-56 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 Gene3D G3DSA:3.40.50.1240 2 208 4.2E-62 T 12-10-2018 IPR029033 Histidine phosphatase superfamily CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 SMART SM00855 4 158 3.5E-23 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CLSA_c23660 6d18ef035e9399bbc281a31fc38574d8 209 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 SMART SM00641 4 111 6.7E-9 T 12-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Gene3D G3DSA:3.20.20.80 1 203 4.5E-51 T 12-10-2018 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Gene3D G3DSA:2.10.270.10 204 280 2.8E-20 T 12-10-2018 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 SUPERFAMILY SSF51445 4 188 3.44E-45 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 8 41 - T 12-10-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Pfam PF01183 Glycosyl hydrolases family 25 7 178 9.6E-36 T 12-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Gene3D G3DSA:2.10.270.10 281 343 3.3E-17 T 12-10-2018 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 SUPERFAMILY SSF69360 195 340 1.02E-41 T 12-10-2018 CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Pfam PF01473 Putative cell wall binding repeat 221 237 0.073 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Pfam PF01473 Putative cell wall binding repeat 264 276 0.56 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Pfam PF01473 Putative cell wall binding repeat 243 254 0.012 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Pfam PF01473 Putative cell wall binding repeat 305 323 0.34 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c25740 1b7c97aa723305c5c236fb7e3dd4f4ff 344 Pfam PF01473 Putative cell wall binding repeat 285 303 1.5E-8 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c28630 323dee1ee89aacaf6e4d2db22d35222f 230 Pfam PF04474 Protein of unknown function (DUF554) 2 227 2.6E-78 T 12-10-2018 IPR007563 Protein of unknown function DUF554 CLSA_c19820 bc395a97fbc019e91e98f16f1292eefa 196 SUPERFAMILY SSF52317 1 174 1.43E-24 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c19820 bc395a97fbc019e91e98f16f1292eefa 196 Gene3D G3DSA:3.40.50.880 1 196 2.2E-38 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c19820 bc395a97fbc019e91e98f16f1292eefa 196 Pfam PF01965 DJ-1/PfpI family 2 172 1.4E-25 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CLSA_c19000 d2a2509960b1bbd38c27d83d7b91ebf3 139 Pfam PF00583 Acetyltransferase (GNAT) family 24 128 3.7E-16 T 12-10-2018 IPR000182 GNAT domain CLSA_c19000 d2a2509960b1bbd38c27d83d7b91ebf3 139 SUPERFAMILY SSF55729 1 130 1.01E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c19000 d2a2509960b1bbd38c27d83d7b91ebf3 139 Gene3D G3DSA:3.40.630.30 1 138 1.0E-27 T 12-10-2018 CLSA_c06910 016c09192ba6a88f2ab7319f2168541b 262 Pfam PF01522 Polysaccharide deacetylase 91 222 7.2E-24 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c06910 016c09192ba6a88f2ab7319f2168541b 262 SUPERFAMILY SSF88713 54 227 1.64E-33 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c06910 016c09192ba6a88f2ab7319f2168541b 262 Gene3D G3DSA:3.20.20.370 31 261 4.9E-58 T 12-10-2018 CLSA_c34440 057fdd92bae3c28748c614ba86e904bd 204 Pfam PF11667 Putative zincin peptidase 89 193 5.1E-22 T 12-10-2018 IPR021683 Putative zincin peptidase CLSA_c32520 49c7017d1459dc6fa9cc8f93e9c27d33 277 Pfam PF06180 Cobalt chelatase (CbiK) 4 262 3.0E-98 T 12-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CLSA_c32520 49c7017d1459dc6fa9cc8f93e9c27d33 277 SUPERFAMILY SSF53800 3 262 4.25E-72 T 12-10-2018 CLSA_c32520 49c7017d1459dc6fa9cc8f93e9c27d33 277 Gene3D G3DSA:3.40.50.1400 115 241 2.4E-83 T 12-10-2018 CLSA_c32520 49c7017d1459dc6fa9cc8f93e9c27d33 277 PIRSF PIRSF033579 2 273 1.7E-98 T 12-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CLSA_c32520 49c7017d1459dc6fa9cc8f93e9c27d33 277 Gene3D G3DSA:3.40.50.1400 4 258 2.4E-83 T 12-10-2018 CLSA_c38860 0956dde0e9f8e476e1bc2153575547bd 675 PIRSF PIRSF018968 1 673 5.1E-70 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 CLSA_c38860 0956dde0e9f8e476e1bc2153575547bd 675 Pfam PF02687 FtsX-like permease family 88 184 9.2E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c20560 609c908b0b2406e84804a395aae7996d 254 Gene3D G3DSA:3.40.50.300 4 253 1.8E-55 T 12-10-2018 CLSA_c20560 609c908b0b2406e84804a395aae7996d 254 Pfam PF13614 AAA domain 9 173 8.5E-36 T 12-10-2018 IPR025669 AAA domain CLSA_c20560 609c908b0b2406e84804a395aae7996d 254 SUPERFAMILY SSF52540 8 250 1.18E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40440 2db17bf047772399279391b731aba907 357 Pfam PF04198 Putative sugar-binding domain 102 349 2.5E-59 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CLSA_c40440 2db17bf047772399279391b731aba907 357 SUPERFAMILY SSF100950 101 350 4.61E-65 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c40440 2db17bf047772399279391b731aba907 357 SUPERFAMILY SSF46785 33 96 6.12E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c40440 2db17bf047772399279391b731aba907 357 Gene3D G3DSA:3.40.50.1360 104 350 5.6E-71 T 12-10-2018 CLSA_c40440 2db17bf047772399279391b731aba907 357 Gene3D G3DSA:1.10.10.10 27 103 8.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15700 e6d5cb31384ccda6d47dc25f27caa6f3 300 SUPERFAMILY SSF103481 44 145 1.31E-11 T 12-10-2018 CLSA_c15700 e6d5cb31384ccda6d47dc25f27caa6f3 300 Pfam PF00892 EamA-like transporter family 11 142 1.5E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c15700 e6d5cb31384ccda6d47dc25f27caa6f3 300 Pfam PF00892 EamA-like transporter family 153 281 5.3E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c15700 e6d5cb31384ccda6d47dc25f27caa6f3 300 SUPERFAMILY SSF103481 185 285 4.71E-12 T 12-10-2018 CLSA_c24040 9fb62f61d23f34cb7e2eecc4f7c34be6 434 Pfam PF01554 MatE 231 385 2.9E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c24040 9fb62f61d23f34cb7e2eecc4f7c34be6 434 Pfam PF01554 MatE 11 172 4.1E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c24040 9fb62f61d23f34cb7e2eecc4f7c34be6 434 PIRSF PIRSF006603 1 434 1.5E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c24040 9fb62f61d23f34cb7e2eecc4f7c34be6 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 404 1.7E-55 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c23550 4b155cfe6139eb430ac38bb4809350f9 41 SUPERFAMILY SSF48600 3 24 6.23E-5 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c23550 4b155cfe6139eb430ac38bb4809350f9 41 Gene3D G3DSA:1.20.59.10 1 30 6.6E-5 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLSA_c13980 b48da4210197fe3d3cd1bd74c7f8fbfd 75 Pfam PF13083 KH domain 2 74 6.2E-25 T 12-10-2018 CLSA_c13980 b48da4210197fe3d3cd1bd74c7f8fbfd 75 Hamap MF_00088 UPF0109 protein . 1 75 24.061 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 CLSA_c13980 b48da4210197fe3d3cd1bd74c7f8fbfd 75 SUPERFAMILY SSF54814 4 61 1.44E-8 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CLSA_c30750 804419fd4e6e0563bb938bb8a1334742 317 Pfam PF00953 Glycosyl transferase family 4 72 232 8.5E-35 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CLSA_c17570 c10a9787250453e4ff8c280cbbbf6a28 262 Pfam PF02361 Cobalt transport protein 46 231 3.6E-19 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CLSA_c22290 738c276207c7593417dabde11cc3e2bf 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 2.5E-82 T 12-10-2018 IPR003797 DegV CLSA_c22290 738c276207c7593417dabde11cc3e2bf 282 Gene3D G3DSA:3.30.1180.10 153 282 9.4E-35 T 12-10-2018 CLSA_c22290 738c276207c7593417dabde11cc3e2bf 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 1.5E-81 T 12-10-2018 IPR003797 DegV CLSA_c22290 738c276207c7593417dabde11cc3e2bf 282 Gene3D G3DSA:3.40.50.10170 1 151 6.1E-47 T 12-10-2018 CLSA_c22290 738c276207c7593417dabde11cc3e2bf 282 SUPERFAMILY SSF82549 1 278 2.88E-75 T 12-10-2018 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 Gene3D G3DSA:3.30.465.40 10 239 4.3E-73 T 12-10-2018 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 Gene3D G3DSA:3.30.70.2740 349 429 5.7E-13 T 12-10-2018 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 Pfam PF01565 FAD binding domain 46 183 3.7E-41 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 Gene3D G3DSA:1.10.45.10 430 470 1.0E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 SUPERFAMILY SSF56176 6 221 7.48E-66 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 SUPERFAMILY SSF55103 224 471 8.99E-51 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CLSA_c19070 379b3618304ffa02f4a1a1cc40a32097 477 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 469 5.2E-53 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CLSA_c37480 f8fc47965a4474bd23565d0744d5ac3a 228 Gene3D G3DSA:1.25.10.90 1 223 5.1E-17 T 12-10-2018 CLSA_c37480 f8fc47965a4474bd23565d0744d5ac3a 228 Pfam PF08713 DNA alkylation repair enzyme 6 194 1.1E-15 T 12-10-2018 IPR014825 DNA alkylation repair enzyme CLSA_c37480 f8fc47965a4474bd23565d0744d5ac3a 228 SUPERFAMILY SSF48371 10 208 2.8E-42 T 12-10-2018 IPR016024 Armadillo-type fold CLSA_c22490 e02733283035819257783da71b0eadf0 309 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 304 29.113 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CLSA_c22490 e02733283035819257783da71b0eadf0 309 Pfam PF01715 IPP transferase 38 284 3.1E-80 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CLSA_c22490 e02733283035819257783da71b0eadf0 309 SUPERFAMILY SSF52540 1 306 9.27E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22490 e02733283035819257783da71b0eadf0 309 Gene3D G3DSA:1.10.20.140 112 184 4.9E-100 T 12-10-2018 CLSA_c22490 e02733283035819257783da71b0eadf0 309 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 290 6.2E-91 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CLSA_c22490 e02733283035819257783da71b0eadf0 309 SUPERFAMILY SSF52540 6 149 9.74E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22490 e02733283035819257783da71b0eadf0 309 Gene3D G3DSA:3.40.50.300 10 287 4.9E-100 T 12-10-2018 CLSA_c35610 c95e566f63f2fd354134d19a521607be 172 Gene3D G3DSA:3.40.50.300 25 172 2.4E-16 T 12-10-2018 CLSA_c35610 c95e566f63f2fd354134d19a521607be 172 Pfam PF03237 Terminase-like family 41 154 2.5E-5 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type CLSA_c13760 0b406050de8fd6120bcdf8eceae27124 63 Gene3D G3DSA:2.30.170.40 19 63 1.5E-20 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13760 0b406050de8fd6120bcdf8eceae27124 63 Pfam PF00830 Ribosomal L28 family 3 58 1.9E-21 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13760 0b406050de8fd6120bcdf8eceae27124 63 SUPERFAMILY SSF143800 1 61 1.35E-24 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c13760 0b406050de8fd6120bcdf8eceae27124 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 5.6E-23 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c13760 0b406050de8fd6120bcdf8eceae27124 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 17.547 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c06450 c692ec9ccbd80bea669585ba89a83341 205 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 200 29.296 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CLSA_c06450 c692ec9ccbd80bea669585ba89a83341 205 SUPERFAMILY SSF52374 1 201 4.22E-50 T 12-10-2018 CLSA_c06450 c692ec9ccbd80bea669585ba89a83341 205 Pfam PF01467 Cytidylyltransferase-like 6 174 2.7E-27 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c06450 c692ec9ccbd80bea669585ba89a83341 205 Gene3D G3DSA:3.40.50.620 1 203 6.7E-58 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c06450 c692ec9ccbd80bea669585ba89a83341 205 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 6.2E-11 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLSA_c06450 c692ec9ccbd80bea669585ba89a83341 205 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 199 9.6E-51 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 103 2.5E-32 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 PIRSF PIRSF000077 1 104 1.6E-35 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 Gene3D G3DSA:3.40.30.10 1 105 1.6E-30 T 12-10-2018 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 PRINTS PR00421 Thioredoxin family signature 68 79 2.5E-7 T 12-10-2018 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 PRINTS PR00421 Thioredoxin family signature 29 38 2.5E-7 T 12-10-2018 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 PRINTS PR00421 Thioredoxin family signature 21 29 2.5E-7 T 12-10-2018 CLSA_c12850 b253a162023412297b9a92179e9449e6 106 SUPERFAMILY SSF52833 2 104 3.79E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c12850 b253a162023412297b9a92179e9449e6 106 Pfam PF00085 Thioredoxin 3 102 3.7E-28 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Pfam PF00117 Glutamine amidotransferase class-I 8 187 8.7E-41 T 12-10-2018 IPR017926 Glutamine amidotransferase CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Pfam PF03054 tRNA methyl transferase 217 250 1.7E-5 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 192 2.4E-78 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Pfam PF00958 GMP synthase C terminal domain 421 512 2.1E-41 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Gene3D G3DSA:3.40.50.620 198 393 1.1E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Gene3D G3DSA:3.40.50.880 3 197 4.3E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 7.4E-7 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 7.4E-7 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 7.4E-7 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 7.0E-6 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 7.0E-6 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 7.0E-6 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Gene3D G3DSA:3.30.300.10 394 513 4.4E-51 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 SUPERFAMILY SSF52317 5 198 5.73E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 SUPERFAMILY SSF52402 181 434 2.43E-56 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 513 52.503 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 SUPERFAMILY SSF54810 393 513 1.19E-48 T 12-10-2018 CLSA_c03690 05066304ea0ad537b8f0b48e1177d25d 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 513 1.2E-144 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLSA_c38610 cfd123ef47884fefd97a33106d0440e8 343 Pfam PF12146 Serine aminopeptidase, S33 68 323 2.7E-43 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 CLSA_c38610 cfd123ef47884fefd97a33106d0440e8 343 SUPERFAMILY SSF53474 44 338 1.58E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c38610 cfd123ef47884fefd97a33106d0440e8 343 Gene3D G3DSA:3.40.50.1820 39 341 1.7E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c05890 bccdfca49f9fd9d999c0079070e65b93 124 Gene3D G3DSA:3.30.1330.40 1 124 1.1E-49 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CLSA_c05890 bccdfca49f9fd9d999c0079070e65b93 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 5.4E-51 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 CLSA_c05890 bccdfca49f9fd9d999c0079070e65b93 124 SUPERFAMILY SSF55298 3 124 2.67E-41 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CLSA_c05890 bccdfca49f9fd9d999c0079070e65b93 124 Pfam PF01042 Endoribonuclease L-PSP 8 123 1.1E-41 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CLSA_c01580 3b80b5fc7adc9d1fa26d971e3794fad0 315 Gene3D G3DSA:1.20.58.340 134 255 2.4E-27 T 12-10-2018 CLSA_c01580 3b80b5fc7adc9d1fa26d971e3794fad0 315 Gene3D G3DSA:3.30.460.20 1 133 2.3E-26 T 12-10-2018 CLSA_c01580 3b80b5fc7adc9d1fa26d971e3794fad0 315 Pfam PF01544 CorA-like Mg2+ transporter protein 25 310 6.2E-55 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLSA_c01580 3b80b5fc7adc9d1fa26d971e3794fad0 315 SUPERFAMILY SSF143865 18 248 1.14E-50 T 12-10-2018 CLSA_c01580 3b80b5fc7adc9d1fa26d971e3794fad0 315 SUPERFAMILY SSF144083 249 311 1.09E-14 T 12-10-2018 CLSA_c01580 3b80b5fc7adc9d1fa26d971e3794fad0 315 Gene3D G3DSA:1.20.58.340 257 313 2.4E-13 T 12-10-2018 CLSA_c19790 d09221786c575bcb9640b44c90183ada 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 415 6.7E-66 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c19790 d09221786c575bcb9640b44c90183ada 456 Pfam PF01554 MatE 247 403 5.8E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c19790 d09221786c575bcb9640b44c90183ada 456 Pfam PF01554 MatE 26 186 2.5E-30 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c19790 d09221786c575bcb9640b44c90183ada 456 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 22 218 0.002 T 12-10-2018 CLSA_c19790 d09221786c575bcb9640b44c90183ada 456 PIRSF PIRSF006603 1 452 1.7E-96 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21140 36364b311809b8c6aa28f5001c476dae 307 SUPERFAMILY SSF103481 57 160 1.29E-8 T 12-10-2018 CLSA_c21140 36364b311809b8c6aa28f5001c476dae 307 Pfam PF00892 EamA-like transporter family 171 305 1.9E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c21140 36364b311809b8c6aa28f5001c476dae 307 Pfam PF00892 EamA-like transporter family 16 158 3.4E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c21140 36364b311809b8c6aa28f5001c476dae 307 SUPERFAMILY SSF103481 206 306 2.09E-8 T 12-10-2018 CLSA_c41790 a797612bbc08e7ae3c0a278e81d0b1ba 198 Pfam PF14879 Domain of unknown function (DUF4489) 42 192 2.9E-34 T 12-10-2018 IPR027972 Protein of unknown function DUF4489 CLSA_c15880 e2a3ff23676454ab1e8d80dc619006b6 131 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 131 31.199 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 CLSA_c15880 e2a3ff23676454ab1e8d80dc619006b6 131 SUPERFAMILY SSF102546 1 131 6.15E-46 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CLSA_c15880 e2a3ff23676454ab1e8d80dc619006b6 131 Gene3D G3DSA:3.40.1650.10 8 128 1.8E-37 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CLSA_c15880 e2a3ff23676454ab1e8d80dc619006b6 131 Pfam PF05025 RbsD / FucU transport protein family 1 130 3.8E-47 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CLSA_c24030 e07086f6a5aad3a8b623d6a8ebedcc13 270 Gene3D G3DSA:1.10.1660.10 2 121 3.3E-25 T 12-10-2018 CLSA_c24030 e07086f6a5aad3a8b623d6a8ebedcc13 270 Pfam PF13411 MerR HTH family regulatory protein 4 70 1.6E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c24030 e07086f6a5aad3a8b623d6a8ebedcc13 270 SUPERFAMILY SSF46955 4 108 3.08E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily CLSA_c24030 e07086f6a5aad3a8b623d6a8ebedcc13 270 Gene3D G3DSA:3.20.80.10 122 267 1.6E-9 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c24030 e07086f6a5aad3a8b623d6a8ebedcc13 270 SUPERFAMILY SSF55136 123 266 8.37E-14 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c24030 e07086f6a5aad3a8b623d6a8ebedcc13 270 SMART SM00422 4 74 2.5E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLSA_c43410 29794a125b80854037adf671ce3c1821 136 Pfam PF12653 Protein of unknown function (DUF3785) 3 136 1.5E-62 T 12-10-2018 IPR024210 Protein of unknown function DUF3785 CLSA_c00930 bc12d8c5ed62d8567d9479a7a47cc9ae 134 Pfam PF04138 GtrA-like protein 20 129 3.0E-13 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 CLSA_c07730 6c3f7f9e86f77794d2b43a10dfcf6766 231 Gene3D G3DSA:1.10.3210.10 53 230 3.3E-9 T 12-10-2018 CLSA_c07730 6c3f7f9e86f77794d2b43a10dfcf6766 231 SUPERFAMILY SSF109604 50 175 8.07E-8 T 12-10-2018 CLSA_c21370 5177aaa5841a6e583351aa608b7c13e0 116 Gene3D G3DSA:2.60.120.10 4 105 1.5E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c21370 5177aaa5841a6e583351aa608b7c13e0 116 Pfam PF07883 Cupin domain 31 96 4.8E-17 T 12-10-2018 IPR013096 Cupin 2, conserved barrel CLSA_c21370 5177aaa5841a6e583351aa608b7c13e0 116 SUPERFAMILY SSF51182 24 106 6.17E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 Gene3D G3DSA:1.10.1380.10 75 476 2.3E-183 T 12-10-2018 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 Pfam PF05649 Peptidase family M13 50 433 8.9E-72 T 12-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 Gene3D G3DSA:3.40.390.10 46 683 2.3E-183 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 481 493 4.2E-21 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 520 536 4.2E-21 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 499 511 4.2E-21 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 591 602 4.2E-21 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 SUPERFAMILY SSF55486 45 683 5.86E-158 T 12-10-2018 CLSA_c04600 9d48b62bddab5ea4a67d379c53521aab 683 Pfam PF01431 Peptidase family M13 489 680 5.9E-57 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 CLSA_c34320 1b1c69be01def8a302fdcf72a1f68f5d 209 Gene3D G3DSA:1.10.3210.10 6 190 4.7E-11 T 12-10-2018 CLSA_c34320 1b1c69be01def8a302fdcf72a1f68f5d 209 SMART SM00471 19 150 1.3E-5 T 12-10-2018 IPR003607 HD/PDEase domain CLSA_c34320 1b1c69be01def8a302fdcf72a1f68f5d 209 SUPERFAMILY SSF109604 14 139 2.66E-14 T 12-10-2018 CLSA_c34320 1b1c69be01def8a302fdcf72a1f68f5d 209 Pfam PF08668 HDOD domain 17 60 1.2E-8 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD CLSA_c19360 6f1ce468be0d9fd2c99ac7ff2d2cf182 147 PIRSF PIRSF003230 1 137 1.4E-30 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CLSA_c19360 6f1ce468be0d9fd2c99ac7ff2d2cf182 147 Pfam PF13279 Thioesterase-like superfamily 14 118 2.4E-13 T 12-10-2018 CLSA_c19360 6f1ce468be0d9fd2c99ac7ff2d2cf182 147 SUPERFAMILY SSF54637 8 129 4.82E-33 T 12-10-2018 IPR029069 HotDog domain superfamily CLSA_c19360 6f1ce468be0d9fd2c99ac7ff2d2cf182 147 Gene3D G3DSA:3.10.129.10 5 133 6.5E-32 T 12-10-2018 CLSA_c19360 6f1ce468be0d9fd2c99ac7ff2d2cf182 147 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 2.0E-23 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CLSA_c40490 d0ee3116e2ce508af80884b1a2ad991a 313 Gene3D G3DSA:2.60.40.10 227 313 4.7E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c40490 d0ee3116e2ce508af80884b1a2ad991a 313 SUPERFAMILY SSF51445 7 222 6.74E-36 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c40490 d0ee3116e2ce508af80884b1a2ad991a 313 Pfam PF01183 Glycosyl hydrolases family 25 12 208 6.0E-27 T 12-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CLSA_c40490 d0ee3116e2ce508af80884b1a2ad991a 313 Gene3D G3DSA:3.20.20.80 1 225 1.2E-69 T 12-10-2018 CLSA_c29190 5ba69fbed0ccca38db5eb65e951f8692 172 Pfam PF00583 Acetyltransferase (GNAT) family 48 148 2.2E-16 T 12-10-2018 IPR000182 GNAT domain CLSA_c29190 5ba69fbed0ccca38db5eb65e951f8692 172 SUPERFAMILY SSF55729 1 160 3.27E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c29190 5ba69fbed0ccca38db5eb65e951f8692 172 Gene3D G3DSA:3.40.630.30 4 171 5.6E-43 T 12-10-2018 CLSA_c27080 f9f857c8f0321b808d605d48ebdcd9b9 344 Pfam PF00482 Type II secretion system (T2SS), protein F 18 137 3.8E-16 T 12-10-2018 IPR018076 Type II secretion system F domain CLSA_c27080 f9f857c8f0321b808d605d48ebdcd9b9 344 Pfam PF00482 Type II secretion system (T2SS), protein F 215 334 2.3E-18 T 12-10-2018 IPR018076 Type II secretion system F domain CLSA_c27080 f9f857c8f0321b808d605d48ebdcd9b9 344 Gene3D G3DSA:1.20.81.30 1 117 2.7E-22 T 12-10-2018 CLSA_c27080 f9f857c8f0321b808d605d48ebdcd9b9 344 Gene3D G3DSA:1.20.81.30 207 307 3.3E-15 T 12-10-2018 CLSA_c00950 84d2eea78c786aa701adce336a76ae19 324 Pfam PF00535 Glycosyl transferase family 2 7 175 1.5E-27 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c00950 84d2eea78c786aa701adce336a76ae19 324 SUPERFAMILY SSF53448 4 258 1.48E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c00950 84d2eea78c786aa701adce336a76ae19 324 Gene3D G3DSA:3.90.550.10 2 208 5.2E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c35220 b71acb74897cf3321caa67f579c63706 188 Pfam PF03691 Uncharacterised protein family (UPF0167) 4 183 1.7E-43 T 12-10-2018 IPR005363 Uncharacterised protein family UPF0167 CLSA_c29950 d91cf90d2e8ac55c1680ee5b6ea3825d 297 Pfam PF04233 Phage Mu protein F like protein 167 260 1.4E-9 T 12-10-2018 IPR006528 Phage head morphogenesis domain CLSA_c29950 d91cf90d2e8ac55c1680ee5b6ea3825d 297 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 167 263 1.0E-17 T 12-10-2018 IPR006528 Phage head morphogenesis domain CLSA_c09890 a0d0e5fe7ed989ae3a43636b237fa292 323 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 16 307 2.0E-55 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c09890 a0d0e5fe7ed989ae3a43636b237fa292 323 Pfam PF03812 2-keto-3-deoxygluconate permease 5 306 2.9E-112 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c20540 c2dd57fa806c0d7074cb411f30df6d4b 137 SUPERFAMILY SSF52172 4 129 8.11E-36 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20540 c2dd57fa806c0d7074cb411f30df6d4b 137 Gene3D G3DSA:3.40.50.2300 1 132 5.2E-34 T 12-10-2018 CLSA_c20540 c2dd57fa806c0d7074cb411f30df6d4b 137 Pfam PF00072 Response regulator receiver domain 7 111 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20540 c2dd57fa806c0d7074cb411f30df6d4b 137 SMART SM00448 5 116 6.7E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c27720 4d5093437c997c650c20c64b1d4c3546 193 SUPERFAMILY SSF69360 118 192 4.32E-19 T 12-10-2018 CLSA_c27720 4d5093437c997c650c20c64b1d4c3546 193 Gene3D G3DSA:2.10.270.10 104 192 3.4E-17 T 12-10-2018 CLSA_c27720 4d5093437c997c650c20c64b1d4c3546 193 Pfam PF01473 Putative cell wall binding repeat 137 154 0.0019 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c27720 4d5093437c997c650c20c64b1d4c3546 193 Pfam PF01473 Putative cell wall binding repeat 156 174 2.0E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c10460 f1a529354ca91f80dac4b13df164d99d 259 SMART SM00382 56 231 6.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c10460 f1a529354ca91f80dac4b13df164d99d 259 Gene3D G3DSA:3.40.50.300 19 258 1.4E-46 T 12-10-2018 CLSA_c10460 f1a529354ca91f80dac4b13df164d99d 259 SUPERFAMILY SSF52540 30 245 5.66E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10460 f1a529354ca91f80dac4b13df164d99d 259 Pfam PF00005 ABC transporter 47 183 1.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c36340 57e953ebaf0eab69e290fd94a5471a92 84 Gene3D G3DSA:2.30.30.320 3 83 4.2E-17 T 12-10-2018 IPR037135 DUF1653-like domain superfamily CLSA_c36340 57e953ebaf0eab69e290fd94a5471a92 84 Pfam PF07866 Protein of unknown function (DUF1653) 12 76 3.9E-27 T 12-10-2018 IPR023387 DUF1653-like domain CLSA_c07860 003d4a379932e36aea7807f2e342ea77 257 Pfam PF14107 Domain of unknown function (DUF4280) 107 255 1.5E-33 T 12-10-2018 IPR025460 Protein of unknown function DUF4280 CLSA_c41720 bd1dc3a742764570d76055a73ffd0254 320 Pfam PF00688 TGF-beta propeptide 37 138 9.3E-5 T 12-10-2018 IPR001111 TGF-beta, propeptide CLSA_c25040 08fa87e42c057462efbde09219d136cb 106 Gene3D G3DSA:1.10.10.10 3 106 1.4E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c25040 08fa87e42c057462efbde09219d136cb 106 SUPERFAMILY SSF46785 6 101 1.07E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c25040 08fa87e42c057462efbde09219d136cb 106 Pfam PF01638 HxlR-like helix-turn-helix 16 104 3.9E-33 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type CLSA_c25300 393b0926a7104f78cd8b84c95c12859d 293 Gene3D G3DSA:1.10.10.10 1 83 1.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c25300 393b0926a7104f78cd8b84c95c12859d 293 SUPERFAMILY SSF53850 88 291 1.18E-27 T 12-10-2018 CLSA_c25300 393b0926a7104f78cd8b84c95c12859d 293 Gene3D G3DSA:3.40.190.290 90 293 4.6E-27 T 12-10-2018 CLSA_c25300 393b0926a7104f78cd8b84c95c12859d 293 SUPERFAMILY SSF46785 1 87 4.85E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c25300 393b0926a7104f78cd8b84c95c12859d 293 Pfam PF03466 LysR substrate binding domain 87 291 1.0E-26 T 12-10-2018 IPR005119 LysR, substrate-binding CLSA_c25300 393b0926a7104f78cd8b84c95c12859d 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 Gene3D G3DSA:1.10.287.130 70 133 5.0E-10 T 12-10-2018 CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 81 137 3.1E-19 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 SMART SM00387 174 283 2.4E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 SUPERFAMILY SSF55874 145 280 2.44E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 Gene3D G3DSA:3.30.565.10 134 281 3.1E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 180 281 1.5E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 PRINTS PR00344 Bacterial sensor protein C-terminal signature 244 262 6.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 PRINTS PR00344 Bacterial sensor protein C-terminal signature 232 242 6.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 PRINTS PR00344 Bacterial sensor protein C-terminal signature 214 228 6.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c32910 2a3854f7aabc7613734b30c344583789 284 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 280 6.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c18270 a3612daa4176b00bd542c0d5ec5419e5 247 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 122 194 1.1E-11 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c18270 a3612daa4176b00bd542c0d5ec5419e5 247 Gene3D G3DSA:3.90.470.20 34 230 5.0E-36 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c18270 a3612daa4176b00bd542c0d5ec5419e5 247 SUPERFAMILY SSF56214 120 227 2.79E-14 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c18270 a3612daa4176b00bd542c0d5ec5419e5 247 SUPERFAMILY SSF56214 29 114 8.72E-13 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c18270 a3612daa4176b00bd542c0d5ec5419e5 247 Gene3D G3DSA:3.90.470.20 122 224 5.0E-36 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CLSA_c40800 c806a40f20397985984258545c065298 251 Pfam PF12730 ABC-2 family transporter protein 4 186 1.5E-20 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c08050 4445f349e2ec57ddd2170746336281b3 189 Pfam PF00498 FHA domain 104 179 1.4E-7 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLSA_c08050 4445f349e2ec57ddd2170746336281b3 189 Gene3D G3DSA:2.60.200.20 81 187 1.3E-10 T 12-10-2018 CLSA_c08050 4445f349e2ec57ddd2170746336281b3 189 SUPERFAMILY SSF49879 88 187 1.13E-10 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CLSA_c42290 ef0e2f239422b818a56469cd31264f47 404 Pfam PF04230 Polysaccharide pyruvyl transferase 73 339 2.1E-37 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase CLSA_c42070 6c507f7c293fb9310be4574e2ad330d1 474 Gene3D G3DSA:3.40.50.720 143 259 1.1E-17 T 12-10-2018 CLSA_c42070 6c507f7c293fb9310be4574e2ad330d1 474 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 16 454 1.2E-136 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLSA_c42070 6c507f7c293fb9310be4574e2ad330d1 474 Pfam PF02397 Bacterial sugar transferase 273 450 1.4E-69 T 12-10-2018 IPR003362 Bacterial sugar transferase CLSA_c42070 6c507f7c293fb9310be4574e2ad330d1 474 Pfam PF13727 CoA-binding domain 65 236 4.6E-22 T 12-10-2018 CLSA_c42070 6c507f7c293fb9310be4574e2ad330d1 474 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 16 455 4.0E-142 T 12-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 CLSA_c10730 02ed755bb44564c49d5820e7757f76a8 567 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 202 365 3.1E-25 T 12-10-2018 IPR004477 ComEC/Rec2-related protein CLSA_c10730 02ed755bb44564c49d5820e7757f76a8 567 Pfam PF03772 Competence protein 182 427 3.7E-47 T 12-10-2018 IPR004477 ComEC/Rec2-related protein CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 Gene3D G3DSA:3.30.750.44 78 369 4.1E-92 T 12-10-2018 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 Gene3D G3DSA:2.30.42.10 132 218 4.1E-92 T 12-10-2018 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 93 402 1.4E-97 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 SMART SM00245 204 394 1.5E-71 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 SMART SM00228 132 203 7.8E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 SUPERFAMILY SSF50156 129 204 7.31E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 Gene3D G3DSA:3.90.226.10 219 391 4.1E-92 T 12-10-2018 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 Pfam PF03572 Peptidase family S41 230 393 1.8E-53 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 Pfam PF13180 PDZ domain 133 205 7.3E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 CLSA_c43070 2e8de543cbee5a70d8746c222d032943 424 SUPERFAMILY SSF52096 78 412 9.94E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CLSA_c08940 6b3b4d832bc161e598e923ed13e6cc5e 312 SUPERFAMILY SSF143631 4 304 2.17E-80 T 12-10-2018 IPR003374 ApbE-like superfamily CLSA_c08940 6b3b4d832bc161e598e923ed13e6cc5e 312 PIRSF PIRSF006268 1 309 1.5E-88 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CLSA_c08940 6b3b4d832bc161e598e923ed13e6cc5e 312 Pfam PF02424 ApbE family 11 281 2.9E-67 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CLSA_c08940 6b3b4d832bc161e598e923ed13e6cc5e 312 Gene3D G3DSA:3.10.520.20 1 311 3.0E-88 T 12-10-2018 CLSA_c36560 bf89af7a4b751dac7729d354924749b8 138 Pfam PF14436 Bacterial EndoU nuclease 17 138 3.3E-28 T 12-10-2018 IPR029501 Bacterial EndoU nuclease CLSA_c10110 42f19b43d28b1f7cb617e0fb18c2daa3 243 Pfam PF12698 ABC-2 family transporter protein 58 232 1.1E-15 T 12-10-2018 CLSA_c40650 6eee59aa6712c8c14e46b705e32cf526 456 Pfam PF04293 SpoVR like protein 3 396 3.8E-144 T 12-10-2018 IPR007390 Sporulation stage V, protein R CLSA_c30150 8a3fdbf49420114ec46909b235bbc355 340 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 163 267 6.9E-7 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CLSA_c30150 8a3fdbf49420114ec46909b235bbc355 340 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 46 127 7.6E-11 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CLSA_c30150 8a3fdbf49420114ec46909b235bbc355 340 SUPERFAMILY SSF52402 21 246 1.1E-26 T 12-10-2018 CLSA_c27120 1ac83dd0552f4481b7ec9089ca6d4dea 298 SUPERFAMILY SSF51445 35 298 1.77E-44 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c27120 1ac83dd0552f4481b7ec9089ca6d4dea 298 Gene3D G3DSA:3.20.20.80 25 297 1.8E-56 T 12-10-2018 CLSA_c27120 1ac83dd0552f4481b7ec9089ca6d4dea 298 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 37 270 7.6E-26 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CLSA_c31270 f2886fee2e7d428dd76b719c63438bd7 108 SUPERFAMILY SSF101386 4 88 2.06E-25 T 12-10-2018 CLSA_c31270 f2886fee2e7d428dd76b719c63438bd7 108 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 1.5E-31 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CLSA_c31270 f2886fee2e7d428dd76b719c63438bd7 108 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 91 6.2E-15 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CLSA_c31270 f2886fee2e7d428dd76b719c63438bd7 108 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 20.393 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CLSA_c31270 f2886fee2e7d428dd76b719c63438bd7 108 Gene3D G3DSA:1.10.287.1080 1 95 1.4E-30 T 12-10-2018 CLSA_c33750 8ba3f5487249c43532570ec5788e1b4e 56 Pfam PF09388 Spo0E like sporulation regulatory protein 7 49 5.4E-16 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLSA_c33750 8ba3f5487249c43532570ec5788e1b4e 56 SUPERFAMILY SSF140500 4 52 1.16E-10 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 CLSA_c33750 8ba3f5487249c43532570ec5788e1b4e 56 Gene3D G3DSA:1.20.58.990 2 56 6.9E-6 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 CLSA_c34690 e7f50a27e110168b53b2eb86a9afa545 244 SUPERFAMILY SSF88713 45 207 7.23E-35 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c34690 e7f50a27e110168b53b2eb86a9afa545 244 Pfam PF01522 Polysaccharide deacetylase 81 203 2.9E-26 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c34690 e7f50a27e110168b53b2eb86a9afa545 244 Gene3D G3DSA:3.20.20.370 24 243 1.9E-61 T 12-10-2018 CLSA_c21840 9019afd746a6e964f33bd8387a0f98f0 260 Pfam PF00075 RNase H 119 232 8.9E-18 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CLSA_c21840 9019afd746a6e964f33bd8387a0f98f0 260 Gene3D G3DSA:3.30.420.10 99 241 2.4E-25 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c21840 9019afd746a6e964f33bd8387a0f98f0 260 SUPERFAMILY SSF53098 119 230 2.66E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c39040 79f130c26f7e8cabeb451102853bb9fb 354 SUPERFAMILY SSF88713 132 353 8.9E-47 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLSA_c39040 79f130c26f7e8cabeb451102853bb9fb 354 Pfam PF01522 Polysaccharide deacetylase 149 267 2.9E-25 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLSA_c39040 79f130c26f7e8cabeb451102853bb9fb 354 Gene3D G3DSA:3.20.20.370 100 354 2.5E-60 T 12-10-2018 CLSA_c30340 689767505e4de8b69cf7b22d0565b065 263 Gene3D G3DSA:3.90.1010.10 82 150 2.1E-6 T 12-10-2018 CLSA_c30340 689767505e4de8b69cf7b22d0565b065 263 SUPERFAMILY SSF82649 88 134 1.33E-7 T 12-10-2018 CLSA_c13150 9e08816a84d2e8056f6edd3a66696692 142 Gene3D G3DSA:3.10.129.10 1 142 9.0E-52 T 12-10-2018 CLSA_c13150 9e08816a84d2e8056f6edd3a66696692 142 Pfam PF07977 FabA-like domain 11 136 2.4E-32 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CLSA_c13150 9e08816a84d2e8056f6edd3a66696692 142 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 141 2.6E-51 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CLSA_c13150 9e08816a84d2e8056f6edd3a66696692 142 SUPERFAMILY SSF54637 2 141 3.65E-42 T 12-10-2018 IPR029069 HotDog domain superfamily CLSA_c22770 88164d6e3d1825785baf993d484a259f 272 Pfam PF01925 Sulfite exporter TauE/SafE 8 266 1.6E-47 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CLSA_c37010 4e61eee7ba3930c99d3231509f3385bb 112 SUPERFAMILY SSF69118 16 109 1.02E-20 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLSA_c37010 4e61eee7ba3930c99d3231509f3385bb 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 22 107 5.7E-14 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLSA_c37010 4e61eee7ba3930c99d3231509f3385bb 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 38 85 7.9E-9 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLSA_c37010 4e61eee7ba3930c99d3231509f3385bb 112 Gene3D G3DSA:1.20.1290.10 1 112 5.4E-28 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 SMART SM00487 256 536 0.0029 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 Pfam PF04851 Type III restriction enzyme, res subunit 259 479 6.1E-8 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 Gene3D G3DSA:3.40.50.300 717 894 1.8E-21 T 12-10-2018 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 Pfam PF13307 Helicase C-terminal domain 786 880 9.0E-14 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 SUPERFAMILY SSF52540 279 894 1.2E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 SMART SM00491 758 884 3.9E-5 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 SMART SM00479 11 173 8.6E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 SUPERFAMILY SSF53098 8 177 3.61E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 Gene3D G3DSA:3.30.420.10 5 173 1.7E-32 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 Gene3D G3DSA:3.40.50.300 258 510 3.3E-30 T 12-10-2018 CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 SUPERFAMILY SSF52540 256 489 3.34E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25940 5bd1fce15ff8366b343a10dd1e2a2a5f 975 Pfam PF00929 Exonuclease 14 163 3.2E-13 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c34610 8526742679f228c365249c12b824d3ae 236 SMART SM00849 19 213 1.7E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c34610 8526742679f228c365249c12b824d3ae 236 SUPERFAMILY SSF56281 21 226 1.72E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c34610 8526742679f228c365249c12b824d3ae 236 Gene3D G3DSA:3.60.15.10 9 235 3.9E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c34610 8526742679f228c365249c12b824d3ae 236 Pfam PF00753 Metallo-beta-lactamase superfamily 23 213 2.7E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c16030 4dc869b783bf6bb529870af79f02db75 51 Pfam PF13451 Probable zinc-ribbon domain 2 48 1.5E-27 T 12-10-2018 IPR025306 Probable zinc-binding domain CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 175 22.923 T 12-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.2E-26 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 115 171 2.6E-27 T 12-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 Gene3D G3DSA:3.30.160.100 1 103 1.8E-31 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 Gene3D G3DSA:3.30.505.50 129 175 1.6E-25 T 12-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 SUPERFAMILY SSF69754 1 100 1.28E-31 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like CLSA_c05360 5f17d73b791b49750240f69c952881c1 177 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.6E-26 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CLSA_c23700 590da815344ae67c55f896c1031e4073 335 Pfam PF13274 Protein of unknown function (DUF4065) 184 278 3.7E-11 T 12-10-2018 IPR025272 Domain of unknown function DUF4065 CLSA_c23700 590da815344ae67c55f896c1031e4073 335 Gene3D G3DSA:1.10.260.40 21 132 9.8E-8 T 12-10-2018 CLSA_c12150 99377993727ac18288a220f3606a8271 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 165 239 4.1E-8 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CLSA_c12150 99377993727ac18288a220f3606a8271 337 Gene3D G3DSA:3.40.50.720 3 322 1.6E-109 T 12-10-2018 CLSA_c12150 99377993727ac18288a220f3606a8271 337 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 331 1.6E-147 T 12-10-2018 IPR030827 Inositol 2-dehydrogenase CLSA_c12150 99377993727ac18288a220f3606a8271 337 SUPERFAMILY SSF51735 2 188 7.06E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c12150 99377993727ac18288a220f3606a8271 337 Gene3D G3DSA:3.30.360.10 142 270 1.6E-109 T 12-10-2018 CLSA_c12150 99377993727ac18288a220f3606a8271 337 SUPERFAMILY SSF55347 131 291 5.89E-33 T 12-10-2018 CLSA_c12150 99377993727ac18288a220f3606a8271 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 123 6.1E-28 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLSA_c20250 1a9a0f102863eb8be15e8efa2cf1daac 241 Pfam PF12730 ABC-2 family transporter protein 4 176 2.0E-6 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c24080 276b2e28a66055055b0c58abce8b893f 491 Pfam PF00324 Amino acid permease 13 444 6.9E-76 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CLSA_c24080 276b2e28a66055055b0c58abce8b893f 491 Gene3D G3DSA:1.20.1740.10 1 462 4.3E-70 T 12-10-2018 CLSA_c24080 276b2e28a66055055b0c58abce8b893f 491 PIRSF PIRSF006060 1 462 3.2E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c14600 e028a4cf31100d4e36e3652a3e1cffc8 326 Pfam PF12671 Putative amidase domain 184 314 1.4E-25 T 12-10-2018 IPR024301 Putative amidase domain CLSA_c31620 eaed24f32331c78900376c9a834e033b 148 Gene3D G3DSA:3.40.50.1010 2 130 3.1E-6 T 12-10-2018 CLSA_c31620 eaed24f32331c78900376c9a834e033b 148 SUPERFAMILY SSF88723 4 125 8.41E-6 T 12-10-2018 IPR029060 PIN-like domain superfamily CLSA_c27660 85726afdacd1edf096668f305bd42ed8 171 Pfam PF07853 Protein of unknown function (DUF1648) 28 66 6.6E-12 T 12-10-2018 IPR012867 Domain of unknown function DUF1648 CLSA_c44580 ff8c6399f742868bc351c1bfcfc9663f 511 SUPERFAMILY SSF56672 94 432 2.19E-48 T 12-10-2018 CLSA_c44580 ff8c6399f742868bc351c1bfcfc9663f 511 Gene3D G3DSA:3.30.70.270 245 345 2.5E-5 T 12-10-2018 CLSA_c44580 ff8c6399f742868bc351c1bfcfc9663f 511 Pfam PF08388 Group II intron, maturase-specific domain 357 436 1.5E-20 T 12-10-2018 IPR013597 Group II intron, maturase-specific CLSA_c44580 ff8c6399f742868bc351c1bfcfc9663f 511 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 68 423 2.9E-102 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase CLSA_c44580 ff8c6399f742868bc351c1bfcfc9663f 511 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 120 341 2.3E-39 T 12-10-2018 IPR000477 Reverse transcriptase domain CLSA_c44580 ff8c6399f742868bc351c1bfcfc9663f 511 Pfam PF13655 N-terminal domain of reverse transcriptase 24 105 3.2E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain CLSA_c09670 acb8c1708b70190eb232c879a83a5d6b 124 Pfam PF06115 Domain of unknown function (DUF956) 1 116 9.6E-56 T 12-10-2018 IPR010360 Protein of unknown function DUF956 CLSA_c09670 acb8c1708b70190eb232c879a83a5d6b 124 PIRSF PIRSF021265 1 123 5.7E-57 T 12-10-2018 IPR010360 Protein of unknown function DUF956 CLSA_c00220 f048c3a45f89210355b67481dcdb262a 149 Pfam PF13302 Acetyltransferase (GNAT) domain 2 119 6.3E-13 T 12-10-2018 IPR000182 GNAT domain CLSA_c00220 f048c3a45f89210355b67481dcdb262a 149 SUPERFAMILY SSF55729 3 142 1.12E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c00220 f048c3a45f89210355b67481dcdb262a 149 Gene3D G3DSA:3.40.630.30 1 148 1.3E-28 T 12-10-2018 CLSA_c41680 6e51438ad4605e32522e05198c2dd436 367 Gene3D G3DSA:3.90.1150.10 243 367 1.4E-28 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c41680 6e51438ad4605e32522e05198c2dd436 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 361 1.9E-121 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c41680 6e51438ad4605e32522e05198c2dd436 367 Gene3D G3DSA:3.40.640.10 1 241 4.9E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c41680 6e51438ad4605e32522e05198c2dd436 367 PIRSF PIRSF000390 1 367 7.5E-122 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLSA_c41680 6e51438ad4605e32522e05198c2dd436 367 SUPERFAMILY SSF53383 2 366 2.89E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c23210 d4c58e102306097f3284ca146ba05424 135 Pfam PF00072 Response regulator receiver domain 3 125 2.0E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23210 d4c58e102306097f3284ca146ba05424 135 Gene3D G3DSA:3.40.50.2300 1 134 2.0E-34 T 12-10-2018 CLSA_c23210 d4c58e102306097f3284ca146ba05424 135 SMART SM00448 1 124 4.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c23210 d4c58e102306097f3284ca146ba05424 135 SUPERFAMILY SSF52172 1 127 8.68E-30 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c37750 784a53cfed40fe3fad493106a1c31b64 63 ProDom PD004452 BACTERIOCIN PLASMID PRECURSOR ANTIMICROBIAL ANTIBIOTIC SEQUENCING DIRECT SIGNAL A ENTEROCIN 19 46 3.0E-6 T 12-10-2018 IPR002633 Bacteriocin, class IIa GO:0005576|GO:0042742 CLSA_c37750 784a53cfed40fe3fad493106a1c31b64 63 ProSitePatterns PS60030 Bacteriocin class IIa family signature. 21 32 - T 12-10-2018 IPR023384 Bacteriocin, class IIa, conserved site CLSA_c37750 784a53cfed40fe3fad493106a1c31b64 63 Gene3D G3DSA:1.20.5.130 1 62 6.1E-23 T 12-10-2018 IPR023388 Bacteriocin class IIa domain superfamily CLSA_c37750 784a53cfed40fe3fad493106a1c31b64 63 Pfam PF01721 Class II bacteriocin 19 53 6.4E-18 T 12-10-2018 IPR002633 Bacteriocin, class IIa GO:0005576|GO:0042742 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 Gene3D G3DSA:3.40.50.720 405 658 8.6E-61 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 526 544 1.1E-15 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 488 506 1.1E-15 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 406 425 1.1E-15 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 612 628 1.1E-15 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 SUPERFAMILY SSF51395 4 388 7.07E-100 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 489 503 1.5E-5 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 430 1.5E-5 T 12-10-2018 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 SUPERFAMILY SSF51905 372 664 1.33E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 404 640 6.5E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 356 1.7E-68 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 Gene3D G3DSA:3.20.20.70 1 402 4.4E-119 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c15150 acf4a601a9180f844470dde4af225ee8 664 Gene3D G3DSA:3.50.50.60 500 620 8.6E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c44410 570f0ad392b5780bd320fb901f407aec 155 Pfam PF13751 Transposase DDE domain 11 136 8.2E-30 T 12-10-2018 IPR025668 Transposase DDE domain CLSA_c25500 0ffcf84652cfece238f437543cfd4e09 196 SUPERFAMILY SSF55811 3 154 3.38E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c25500 0ffcf84652cfece238f437543cfd4e09 196 Gene3D G3DSA:3.90.79.10 1 190 1.5E-34 T 12-10-2018 CLSA_c25500 0ffcf84652cfece238f437543cfd4e09 196 Pfam PF00293 NUDIX domain 29 149 2.8E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c34120 6ac9f050bedee756e642787360308be3 197 Gene3D G3DSA:3.40.50.850 2 194 1.8E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c34120 6ac9f050bedee756e642787360308be3 197 SUPERFAMILY SSF52499 12 196 1.7E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CLSA_c34120 6ac9f050bedee756e642787360308be3 197 Pfam PF00857 Isochorismatase family 18 186 3.3E-38 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 CLSA_c03510 cb360fb7bf99533e47167eba2e32890a 424 Pfam PF02810 SEC-C motif 398 416 6.2E-10 T 12-10-2018 IPR004027 SEC-C motif CLSA_c03510 cb360fb7bf99533e47167eba2e32890a 424 SUPERFAMILY SSF103642 396 416 5.4E-7 T 12-10-2018 CLSA_c03510 cb360fb7bf99533e47167eba2e32890a 424 Gene3D G3DSA:3.10.450.50 327 417 7.2E-10 T 12-10-2018 CLSA_c38810 8f018708c764f6e6228493975cab886e 453 Gene3D G3DSA:3.20.20.70 92 451 6.4E-73 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c38810 8f018708c764f6e6228493975cab886e 453 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 4 450 2.3E-191 T 12-10-2018 IPR024025 SCIFF radical SAM maturase CLSA_c38810 8f018708c764f6e6228493975cab886e 453 Pfam PF13186 Iron-sulfur cluster-binding domain 347 407 8.7E-7 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c38810 8f018708c764f6e6228493975cab886e 453 SUPERFAMILY SSF102114 93 416 2.62E-62 T 12-10-2018 CLSA_c38810 8f018708c764f6e6228493975cab886e 453 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 347 430 7.5E-21 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c38810 8f018708c764f6e6228493975cab886e 453 Pfam PF04055 Radical SAM superfamily 100 248 6.8E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c38810 8f018708c764f6e6228493975cab886e 453 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 101 112 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLSA_c38810 8f018708c764f6e6228493975cab886e 453 Pfam PF13353 4Fe-4S single cluster domain 101 216 1.2E-10 T 12-10-2018 CLSA_c19900 13f7381f0a39e28ea0358dcc84d8b4aa 231 Pfam PF01881 CRISPR associated protein Cas6 113 222 7.5E-8 T 12-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLSA_c19900 13f7381f0a39e28ea0358dcc84d8b4aa 231 Gene3D G3DSA:3.30.70.1900 112 227 4.4E-6 T 12-10-2018 CLSA_c07220 df80e5bd03edd118eeb48e6cc591c00a 238 Gene3D G3DSA:3.30.240.20 78 149 1.1E-22 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c07220 df80e5bd03edd118eeb48e6cc591c00a 238 Pfam PF04239 Protein of unknown function (DUF421) 85 203 9.2E-31 T 12-10-2018 IPR007353 Protein of unknown function DUF421 CLSA_c07220 df80e5bd03edd118eeb48e6cc591c00a 238 Gene3D G3DSA:3.30.240.20 168 229 1.1E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c14400 a614b4734dc9525c0149174020ffee81 104 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 92 1.1E-9 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLSA_c14400 a614b4734dc9525c0149174020ffee81 104 SUPERFAMILY SSF55315 4 94 2.16E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like CLSA_c14400 a614b4734dc9525c0149174020ffee81 104 Gene3D G3DSA:3.30.1330.30 1 99 1.9E-22 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like CLSA_c21510 f7abe8fb67c072d9b8e5725200f0b2a2 207 SUPERFAMILY SSF55136 129 197 1.05E-7 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c21510 f7abe8fb67c072d9b8e5725200f0b2a2 207 Gene3D G3DSA:3.20.80.10 1 205 3.9E-81 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c21510 f7abe8fb67c072d9b8e5725200f0b2a2 207 Pfam PF06445 GyrI-like small molecule binding domain 18 202 1.3E-23 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain CLSA_c21510 f7abe8fb67c072d9b8e5725200f0b2a2 207 PIRSF PIRSF031644 1 207 8.2E-81 T 12-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 550 4.4E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 SUPERFAMILY SSF55781 227 346 4.21E-6 T 12-10-2018 CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 Pfam PF07694 5TMR of 5TMR-LYT 30 191 1.4E-43 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 Gene3D G3DSA:1.10.1760.20 36 194 1.5E-8 T 12-10-2018 CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 SUPERFAMILY SSF55874 413 548 2.75E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 Pfam PF06580 Histidine kinase 359 437 2.9E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLSA_c19710 9976e9eb505601fcc87f392c4bce31bb 551 Gene3D G3DSA:3.30.565.10 412 551 4.0E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c13460 cfe68c94da66ce69561a11d1517a1e00 246 SUPERFAMILY SSF64438 33 245 6.04E-59 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLSA_c13460 cfe68c94da66ce69561a11d1517a1e00 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 38 245 9.8E-51 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CLSA_c13460 cfe68c94da66ce69561a11d1517a1e00 246 Gene3D G3DSA:3.60.140.10 10 246 5.6E-61 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CLSA_c13460 cfe68c94da66ce69561a11d1517a1e00 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 41 243 1.0E-55 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CLSA_c01810 34ac28914d571b2f9ff1ee128cf31293 148 Gene3D G3DSA:1.10.1520.10 21 148 3.0E-43 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CLSA_c01810 34ac28914d571b2f9ff1ee128cf31293 148 Pfam PF00636 Ribonuclease III domain 33 129 1.1E-13 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CLSA_c01810 34ac28914d571b2f9ff1ee128cf31293 148 SUPERFAMILY SSF69065 25 145 6.8E-36 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CLSA_c01810 34ac28914d571b2f9ff1ee128cf31293 148 PIRSF PIRSF005520 17 148 1.3E-49 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family CLSA_c01810 34ac28914d571b2f9ff1ee128cf31293 148 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 23 148 30.161 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family CLSA_c19560 64dcbcc3a34b979cb686cf154212d2c8 110 SUPERFAMILY SSF46785 5 105 8.3E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c19560 64dcbcc3a34b979cb686cf154212d2c8 110 Gene3D G3DSA:1.10.10.10 1 109 5.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c19560 64dcbcc3a34b979cb686cf154212d2c8 110 Pfam PF03551 Transcriptional regulator PadR-like family 16 86 2.9E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c08540 1b6a718cd77d46f972761c8eaa3fd32a 243 Pfam PF07722 Peptidase C26 4 218 3.6E-66 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 CLSA_c08540 1b6a718cd77d46f972761c8eaa3fd32a 243 Gene3D G3DSA:3.40.50.880 1 242 1.0E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c08540 1b6a718cd77d46f972761c8eaa3fd32a 243 SUPERFAMILY SSF52317 26 240 5.85E-41 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c15710 f8bcae584c09c68b38678a9e5a8863e8 136 SUPERFAMILY SSF52218 3 134 8.23E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c15710 f8bcae584c09c68b38678a9e5a8863e8 136 Pfam PF00258 Flavodoxin 3 121 5.2E-15 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c15710 f8bcae584c09c68b38678a9e5a8863e8 136 Gene3D G3DSA:3.40.50.360 1 135 5.9E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c15710 f8bcae584c09c68b38678a9e5a8863e8 136 TIGRFAM TIGR01753 flav_short: flavodoxin 2 133 6.3E-44 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 CLSA_c15710 f8bcae584c09c68b38678a9e5a8863e8 136 ProSitePatterns PS00201 Flavodoxin signature. 3 19 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLSA_c07940 06f96762b646426d4974b11a18cb9908 269 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2 42 1.0E-12 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c07940 06f96762b646426d4974b11a18cb9908 269 Gene3D G3DSA:2.180.10.10 1 42 6.1E-10 T 12-10-2018 CLSA_c00610 d978897e80869144d1f81b3950b9dbaf 92 Pfam PF13240 zinc-ribbon domain 2 21 1.5E-6 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 CLSA_c09370 2d14d7cd4b9204ed731913020bfeb0c6 672 Pfam PF00999 Sodium/hydrogen exchanger family 6 412 9.0E-64 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLSA_c09370 2d14d7cd4b9204ed731913020bfeb0c6 672 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 418 1.5E-96 T 12-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CLSA_c05580 9b83e3dac710fabb61c0a5143fce4144 345 Pfam PF03116 NQR2, RnfD, RnfE family 29 342 3.0E-110 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 CLSA_c05580 9b83e3dac710fabb61c0a5143fce4144 345 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 27 344 24.142 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CLSA_c05580 9b83e3dac710fabb61c0a5143fce4144 345 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 32 342 4.1E-100 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.1E-18 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-18 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.1E-18 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 1.1E-18 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 SUPERFAMILY SSF51905 2 314 5.89E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 429 1.7E-17 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 Gene3D G3DSA:3.50.50.60 113 439 2.2E-146 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 305 6.5E-65 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 Gene3D G3DSA:3.50.50.60 2 338 2.2E-146 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 1.5E-14 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.5E-14 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.5E-14 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 1.5E-14 T 12-10-2018 CLSA_c24260 1def173e96171d33c2e99c0661bb3bac 447 SUPERFAMILY SSF55424 321 444 2.58E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CLSA_c34680 b3cea9bab8efef9f6dda22e0f54200c1 88 Pfam PF12675 Protein of unknown function (DUF3795) 4 62 2.0E-7 T 12-10-2018 IPR024227 Protein of unknown function DUF3795 CLSA_c33370 99006e9706718697c46bec75a7537ada 233 Gene3D G3DSA:3.30.240.20 169 230 1.5E-13 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c33370 99006e9706718697c46bec75a7537ada 233 Gene3D G3DSA:3.30.240.20 81 153 2.1E-24 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CLSA_c33370 99006e9706718697c46bec75a7537ada 233 Pfam PF04239 Protein of unknown function (DUF421) 89 204 5.4E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 CLSA_c30440 08e2497ccd0e988b85d151ca37139a2a 226 Gene3D G3DSA:1.10.260.40 1 64 1.9E-25 T 12-10-2018 CLSA_c30440 08e2497ccd0e988b85d151ca37139a2a 226 SUPERFAMILY SSF47413 2 68 1.96E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c30440 08e2497ccd0e988b85d151ca37139a2a 226 Pfam PF01381 Helix-turn-helix 7 61 2.1E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30440 08e2497ccd0e988b85d151ca37139a2a 226 SMART SM00530 6 61 1.2E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c29710 790b47768a3c272825263c69f6a89842 78 SUPERFAMILY SSF57997 6 49 9.59E-5 T 12-10-2018 CLSA_c29710 790b47768a3c272825263c69f6a89842 78 Pfam PF10779 Haemolysin XhlA 6 71 1.2E-27 T 12-10-2018 IPR019715 Haemolysin XhlA CLSA_c29710 790b47768a3c272825263c69f6a89842 78 Gene3D G3DSA:1.20.5.340 2 59 2.6E-5 T 12-10-2018 CLSA_c26080 2380b815d08acf40689c4c7d7a853e34 283 Pfam PF11185 Protein of unknown function (DUF2971) 124 211 1.2E-8 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 Pfam PF01676 Metalloenzyme superfamily 5 381 6.6E-39 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 Hamap MF_00740 Phosphopentomutase [deoB]. 4 392 53.014 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 Gene3D G3DSA:3.30.70.1250 99 219 8.5E-160 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 SUPERFAMILY SSF143856 104 219 1.44E-49 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 384 3.9E-170 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 Gene3D G3DSA:3.40.720.10 5 391 8.5E-160 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 SUPERFAMILY SSF53649 2 395 4.71E-72 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CLSA_c24310 90287df1ec948aac916a0b2294341654 396 PIRSF PIRSF001491 3 396 1.2E-162 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLSA_c34480 b38aec39677859cb0e6d1497cfbb6416 219 Gene3D G3DSA:3.40.50.300 3 66 2.4E-7 T 12-10-2018 CLSA_c34480 b38aec39677859cb0e6d1497cfbb6416 219 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 129 175 3.2E-8 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CLSA_c34480 b38aec39677859cb0e6d1497cfbb6416 219 SUPERFAMILY SSF52540 6 192 2.73E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c34480 b38aec39677859cb0e6d1497cfbb6416 219 SMART SM00382 10 187 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c34480 b38aec39677859cb0e6d1497cfbb6416 219 Pfam PF13476 AAA domain 8 44 2.6E-7 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain CLSA_c34480 b38aec39677859cb0e6d1497cfbb6416 219 Gene3D G3DSA:3.40.50.300 74 198 1.8E-10 T 12-10-2018 CLSA_c12640 e5efa7e31a34db8806eda2e2635db77d 373 Pfam PF01594 AI-2E family transporter 12 353 3.6E-59 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 PRINTS PR00735 Glycosyl hydrolase family 8 signature 272 281 3.1E-9 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 PRINTS PR00735 Glycosyl hydrolase family 8 signature 242 253 3.1E-9 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 PRINTS PR00735 Glycosyl hydrolase family 8 signature 62 75 3.1E-9 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 PRINTS PR00735 Glycosyl hydrolase family 8 signature 374 388 3.1E-9 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 SUPERFAMILY SSF48208 3 391 1.97E-60 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 Gene3D G3DSA:1.50.10.10 14 388 1.4E-100 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CLSA_c14770 9423f54fa818a7e308bcc1c1c3f2fcfe 391 Pfam PF01270 Glycosyl hydrolases family 8 53 306 1.6E-18 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CLSA_c22320 d3b73871b88aa41ea146415def8e14ff 227 Gene3D G3DSA:3.40.50.300 1 225 6.6E-80 T 12-10-2018 CLSA_c22320 d3b73871b88aa41ea146415def8e14ff 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 12 221 2.3E-71 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CLSA_c22320 d3b73871b88aa41ea146415def8e14ff 227 SUPERFAMILY SSF52540 14 223 2.33E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c22320 d3b73871b88aa41ea146415def8e14ff 227 Pfam PF02224 Cytidylate kinase 14 223 4.2E-72 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CLSA_c22320 d3b73871b88aa41ea146415def8e14ff 227 Hamap MF_00238 Cytidylate kinase [cmk]. 12 226 31.561 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 Gene3D G3DSA:3.40.50.300 1 215 7.2E-86 T 12-10-2018 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 Pfam PF00406 Adenylate kinase 5 190 6.6E-58 T 12-10-2018 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.1E-82 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 PRINTS PR00094 Adenylate kinase signature 4 17 6.2E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 PRINTS PR00094 Adenylate kinase signature 32 46 6.2E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 PRINTS PR00094 Adenylate kinase signature 160 175 6.2E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 PRINTS PR00094 Adenylate kinase signature 177 191 6.2E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 PRINTS PR00094 Adenylate kinase signature 81 97 6.2E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 SUPERFAMILY SSF52540 2 213 7.14E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 2.8E-17 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CLSA_c02230 c7b621d5a0b1082470a11de5fe348e80 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 51.264 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLSA_c39770 549d9a316cc4280fc262d57c8a42cc75 133 SMART SM00260 2 132 4.5E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c39770 549d9a316cc4280fc262d57c8a42cc75 133 Gene3D G3DSA:2.30.30.40 4 126 5.2E-35 T 12-10-2018 CLSA_c39770 549d9a316cc4280fc262d57c8a42cc75 133 SUPERFAMILY SSF50341 2 133 3.92E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CLSA_c39770 549d9a316cc4280fc262d57c8a42cc75 133 Pfam PF01584 CheW-like domain 2 132 3.4E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CLSA_c39770 549d9a316cc4280fc262d57c8a42cc75 133 Gene3D G3DSA:2.40.50.180 19 132 5.2E-35 T 12-10-2018 CLSA_c20940 bddb07d8f5ae8ca6532a472bc82e9777 165 Gene3D G3DSA:2.160.20.10 1 163 8.7E-26 T 12-10-2018 IPR012334 Pectin lyase fold CLSA_c20940 bddb07d8f5ae8ca6532a472bc82e9777 165 SUPERFAMILY SSF51126 2 154 1.02E-5 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor CLSA_c20940 bddb07d8f5ae8ca6532a472bc82e9777 165 Pfam PF16380 Domain of unknown function 110 164 1.8E-11 T 12-10-2018 IPR032153 Domain of unknown function DUF4990 CLSA_c15070 57fd6081697d66e324b39546bd08a69d 394 Pfam PF01594 AI-2E family transporter 34 382 2.3E-49 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like CLSA_c29240 ac0ed2ac9145328ed9e66c051d24b75d 326 SUPERFAMILY SSF53067 4 163 7.12E-10 T 12-10-2018 CLSA_c29240 ac0ed2ac9145328ed9e66c051d24b75d 326 Pfam PF06406 StbA protein 104 297 7.1E-5 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA CLSA_c29240 ac0ed2ac9145328ed9e66c051d24b75d 326 Gene3D G3DSA:3.30.420.40 171 306 9.7E-27 T 12-10-2018 CLSA_c29240 ac0ed2ac9145328ed9e66c051d24b75d 326 SUPERFAMILY SSF53067 170 305 2.59E-13 T 12-10-2018 CLSA_c29240 ac0ed2ac9145328ed9e66c051d24b75d 326 Gene3D G3DSA:3.30.420.40 7 314 9.7E-27 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 Gene3D G3DSA:3.50.50.60 142 280 9.4E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 Gene3D G3DSA:3.50.50.60 281 463 4.0E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 SUPERFAMILY SSF51971 140 394 1.94E-67 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 130 9.6E-44 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 Gene3D G3DSA:1.10.1060.10 2 141 7.7E-42 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 17 460 2.1E-179 T 12-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 7.5E-20 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 PRINTS PR00419 Adrenodoxin reductase family signature 209 219 7.5E-20 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 7.5E-20 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 PRINTS PR00419 Adrenodoxin reductase family signature 285 299 7.5E-20 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 PRINTS PR00419 Adrenodoxin reductase family signature 318 331 7.5E-20 T 12-10-2018 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 142 448 3.1E-34 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 SUPERFAMILY SSF46548 7 152 2.56E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CLSA_c16160 1812fa9c8c2b4b84c25a2945bdabd22a 463 SUPERFAMILY SSF51971 375 460 4.0E-6 T 12-10-2018 CLSA_c36080 25628a812d53c1ec08826a6468bba77f 190 Pfam PF04199 Putative cyclase 3 125 4.7E-10 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c36080 25628a812d53c1ec08826a6468bba77f 190 SUPERFAMILY SSF102198 23 189 6.41E-32 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c36080 25628a812d53c1ec08826a6468bba77f 190 Gene3D G3DSA:3.50.30.50 2 189 1.8E-25 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c03000 d4e8a5a9b2742952a867456af5b692b5 266 Pfam PF13649 Methyltransferase domain 57 156 6.6E-13 T 12-10-2018 CLSA_c03000 d4e8a5a9b2742952a867456af5b692b5 266 Gene3D G3DSA:3.30.1040.40 165 214 1.8E-32 T 12-10-2018 CLSA_c03000 d4e8a5a9b2742952a867456af5b692b5 266 Gene3D G3DSA:3.40.50.150 47 164 1.8E-32 T 12-10-2018 CLSA_c03000 d4e8a5a9b2742952a867456af5b692b5 266 SUPERFAMILY SSF53335 25 254 4.74E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c43280 3524751830b49e666c51801b10f326a2 192 Gene3D G3DSA:2.160.10.10 4 153 2.6E-46 T 12-10-2018 CLSA_c43280 3524751830b49e666c51801b10f326a2 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 50 1.4E-10 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c43280 3524751830b49e666c51801b10f326a2 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 52 86 0.0023 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c43280 3524751830b49e666c51801b10f326a2 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 104 138 6.9E-4 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c43280 3524751830b49e666c51801b10f326a2 192 SUPERFAMILY SSF51161 2 167 2.91E-46 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c20000 8d4da6846f8166858d441e4b55cbb50c 190 SUPERFAMILY SSF46689 7 73 3.9E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c20000 8d4da6846f8166858d441e4b55cbb50c 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 60 1.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c20000 8d4da6846f8166858d441e4b55cbb50c 190 Gene3D G3DSA:1.10.357.10 6 183 1.3E-37 T 12-10-2018 CLSA_c34820 bc79fd80adf040c2e025a6ae036c5273 369 Gene3D G3DSA:3.10.310.10 166 350 1.4E-144 T 12-10-2018 CLSA_c34820 bc79fd80adf040c2e025a6ae036c5273 369 Pfam PF04303 PrpF protein 1 365 6.7E-141 T 12-10-2018 IPR007400 PrpF protein CLSA_c34820 bc79fd80adf040c2e025a6ae036c5273 369 Gene3D G3DSA:3.10.310.10 5 364 1.4E-144 T 12-10-2018 CLSA_c34820 bc79fd80adf040c2e025a6ae036c5273 369 SUPERFAMILY SSF54506 170 367 1.18E-59 T 12-10-2018 CLSA_c34820 bc79fd80adf040c2e025a6ae036c5273 369 SUPERFAMILY SSF54506 2 166 9.42E-60 T 12-10-2018 CLSA_c33290 505a206ccea9b21e790f84a927fdb4cf 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 281 1.2E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c33240 505a206ccea9b21e790f84a927fdb4cf 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 281 1.2E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c16430 09f739b79533b19677555b25227be48a 86 TIGRFAM TIGR04076 TIGR04076: TIGR04076 family protein 4 85 3.2E-21 T 12-10-2018 IPR023811 Conserved hypothetical protein CHP04076 CLSA_c04110 ee7dcba2c4f57f447032e113de5168ce 399 Pfam PF00589 Phage integrase family 180 378 8.5E-27 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLSA_c04110 ee7dcba2c4f57f447032e113de5168ce 399 Gene3D G3DSA:1.10.443.10 167 394 1.2E-52 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CLSA_c04110 ee7dcba2c4f57f447032e113de5168ce 399 Gene3D G3DSA:1.10.150.130 55 166 4.8E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c04110 ee7dcba2c4f57f447032e113de5168ce 399 SUPERFAMILY SSF56349 61 383 7.65E-60 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLSA_c04110 ee7dcba2c4f57f447032e113de5168ce 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 62 119 5.1E-11 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 Gene3D G3DSA:3.10.310.10 3 271 2.0E-94 T 12-10-2018 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 SUPERFAMILY SSF54506 1 132 4.71E-39 T 12-10-2018 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 6.2E-81 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 275 34.481 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 62 76 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 Pfam PF01678 Diaminopimelate epimerase 3 124 1.0E-32 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 Pfam PF01678 Diaminopimelate epimerase 154 266 9.3E-23 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 Gene3D G3DSA:3.10.310.10 121 265 2.0E-94 T 12-10-2018 CLSA_c27140 63dbfb451cb9a3f3364b0cb00abc4cec 275 SUPERFAMILY SSF54506 140 273 2.2E-36 T 12-10-2018 CLSA_c19150 f58845c8f6854d9a7c96f2df56b42cd0 114 SUPERFAMILY SSF46785 5 105 7.96E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c19150 f58845c8f6854d9a7c96f2df56b42cd0 114 Gene3D G3DSA:1.10.10.10 4 114 8.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c19150 f58845c8f6854d9a7c96f2df56b42cd0 114 Pfam PF03551 Transcriptional regulator PadR-like family 15 88 2.1E-18 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c11240 6d815423fd131aedb4c928f5ecc1baf2 255 Gene3D G3DSA:3.10.620.30 78 232 3.8E-20 T 12-10-2018 CLSA_c11240 6d815423fd131aedb4c928f5ecc1baf2 255 SUPERFAMILY SSF54001 111 228 3.76E-21 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c11240 6d815423fd131aedb4c928f5ecc1baf2 255 Pfam PF01841 Transglutaminase-like superfamily 123 214 2.7E-13 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c11240 6d815423fd131aedb4c928f5ecc1baf2 255 SMART SM00460 161 217 5.5E-6 T 12-10-2018 IPR002931 Transglutaminase-like CLSA_c37180 1022358322422a849f5998380e528279 167 SUPERFAMILY SSF51182 1 165 5.93E-55 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily CLSA_c37180 1022358322422a849f5998380e528279 167 Pfam PF06172 Cupin superfamily (DUF985) 6 143 3.0E-43 T 12-10-2018 IPR009327 Cupin domain of unknown function DUF985 CLSA_c37180 1022358322422a849f5998380e528279 167 Gene3D G3DSA:2.60.120.10 1 165 3.2E-60 T 12-10-2018 IPR014710 RmlC-like jelly roll fold CLSA_c04150 bec5b5a5aecd09334ee7598095d3fe90 57 Pfam PF12728 Helix-turn-helix domain 9 52 5.7E-10 T 12-10-2018 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 PIRSF PIRSF000371 9 60 4.0E-14 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 PIRSF PIRSF000371 58 260 8.9E-43 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 SUPERFAMILY SSF102114 38 236 1.24E-26 T 12-10-2018 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 Gene3D G3DSA:3.20.20.70 16 260 3.6E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 19 254 2.7E-95 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 ProSitePatterns PS01087 Radical activating enzymes signature. 31 52 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 Pfam PF13353 4Fe-4S single cluster domain 29 165 5.3E-19 T 12-10-2018 CLSA_c16400 17c88f10a3ac6fb3c38a610399b30c43 264 Pfam PF04055 Radical SAM superfamily 37 195 2.4E-26 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c28410 0825596c80f6d0d8be29d03aff09e63f 303 Gene3D G3DSA:3.40.50.300 113 263 2.8E-7 T 12-10-2018 CLSA_c28410 0825596c80f6d0d8be29d03aff09e63f 303 SUPERFAMILY SSF53795 115 162 4.27E-10 T 12-10-2018 CLSA_c07050 558abd9a7e664f1f16a4241171d9ff57 395 SUPERFAMILY SSF103473 2 387 5.62E-44 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c07050 558abd9a7e664f1f16a4241171d9ff57 395 Gene3D G3DSA:1.20.1250.20 207 389 1.4E-16 T 12-10-2018 CLSA_c07050 558abd9a7e664f1f16a4241171d9ff57 395 Gene3D G3DSA:1.20.1250.20 6 196 3.7E-21 T 12-10-2018 CLSA_c07050 558abd9a7e664f1f16a4241171d9ff57 395 Pfam PF07690 Major Facilitator Superfamily 14 316 2.0E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c07050 558abd9a7e664f1f16a4241171d9ff57 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Gene3D G3DSA:3.30.1490.360 29 93 9.9E-8 T 12-10-2018 CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Gene3D G3DSA:3.30.360.90 399 474 6.5E-9 T 12-10-2018 CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Pfam PF17482 Phage tail sheath C-terminal domain 372 473 1.8E-21 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 95 203 1.4E-8 T 12-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 363 472 8.0E-5 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Gene3D G3DSA:1.10.10.2290 286 362 1.4E-28 T 12-10-2018 CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 207 364 1.2E-29 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain CLSA_c35500 ba20cedeaa55bee6d296084f637d2a8d 474 Gene3D G3DSA:3.40.50.11790 213 392 1.4E-28 T 12-10-2018 CLSA_c21600 f9d6438c791d0e5ae30af25ed6ef3116 258 Pfam PF02361 Cobalt transport protein 11 220 2.4E-21 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CLSA_c29290 1f96ba5e2d9060b8903b6a6c288da772 345 Pfam PF12395 Protein of unknown function 158 263 1.3E-31 T 12-10-2018 IPR022123 Protein of unknown function DUF3658 CLSA_c29290 1f96ba5e2d9060b8903b6a6c288da772 345 Pfam PF08874 Domain of unknown function (DUF1835) 5 126 3.3E-29 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 CLSA_c27830 236e1920783d6b99f8dbd0476239ccca 346 Pfam PF09992 Phosphodiester glycosidase 159 345 6.3E-42 T 12-10-2018 IPR018711 Phosphodiester glycosidase CLSA_c00890 69f5858ffd778e46ddd58da78fdc2202 169 PIRSF PIRSF000368 1 169 3.3E-54 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CLSA_c00890 69f5858ffd778e46ddd58da78fdc2202 169 Gene3D G3DSA:3.20.20.70 4 168 9.6E-33 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c00890 69f5858ffd778e46ddd58da78fdc2202 169 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 7 156 2.7E-51 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CLSA_c00890 69f5858ffd778e46ddd58da78fdc2202 169 Pfam PF13353 4Fe-4S single cluster domain 16 153 2.9E-38 T 12-10-2018 CLSA_c00890 69f5858ffd778e46ddd58da78fdc2202 169 SUPERFAMILY SSF102114 23 101 2.35E-7 T 12-10-2018 CLSA_c00890 69f5858ffd778e46ddd58da78fdc2202 169 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLSA_c42810 deac40a11d72c7bd26c667ebcc1ff8b2 390 Gene3D G3DSA:3.60.21.10 162 363 4.7E-23 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like CLSA_c42810 deac40a11d72c7bd26c667ebcc1ff8b2 390 Pfam PF00149 Calcineurin-like phosphoesterase 164 331 1.4E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c42810 deac40a11d72c7bd26c667ebcc1ff8b2 390 SUPERFAMILY SSF56300 162 387 2.36E-32 T 12-10-2018 CLSA_c26760 14d14c238cd99284bbeb44e2dbb4a434 161 Pfam PF13730 Helix-turn-helix domain 17 70 6.0E-12 T 12-10-2018 CLSA_c26760 14d14c238cd99284bbeb44e2dbb4a434 161 SUPERFAMILY SSF46785 15 74 2.32E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c26760 14d14c238cd99284bbeb44e2dbb4a434 161 Gene3D G3DSA:1.10.10.10 1 111 3.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c07020 e82200faaeec9c013505abba93fa5d76 395 SUPERFAMILY SSF103473 8 386 8.24E-43 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c07020 e82200faaeec9c013505abba93fa5d76 395 Gene3D G3DSA:1.20.1250.20 4 195 7.1E-20 T 12-10-2018 CLSA_c07020 e82200faaeec9c013505abba93fa5d76 395 Gene3D G3DSA:1.20.1250.20 210 388 2.0E-19 T 12-10-2018 CLSA_c07020 e82200faaeec9c013505abba93fa5d76 395 Pfam PF07690 Major Facilitator Superfamily 13 351 1.5E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c07020 e82200faaeec9c013505abba93fa5d76 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c29530 aa4d869771861b264b7ec901d11d6ea1 251 Pfam PF02661 Fic/DOC family 83 188 8.9E-8 T 12-10-2018 IPR003812 Fido domain CLSA_c29530 aa4d869771861b264b7ec901d11d6ea1 251 Gene3D G3DSA:1.10.3290.10 4 244 3.1E-37 T 12-10-2018 IPR036597 Fido-like domain superfamily CLSA_c29530 aa4d869771861b264b7ec901d11d6ea1 251 SUPERFAMILY SSF140931 59 226 4.97E-22 T 12-10-2018 IPR036597 Fido-like domain superfamily CLSA_c09730 536a4776933b573ee882d170977616ea 94 SUPERFAMILY SSF109797 1 94 1.23E-24 T 12-10-2018 CLSA_c09730 536a4776933b573ee882d170977616ea 94 Gene3D G3DSA:1.20.1440.50 1 91 5.2E-22 T 12-10-2018 IPR023130 Ta0600-like superfamily CLSA_c09730 536a4776933b573ee882d170977616ea 94 Pfam PF08951 Enterocin A Immunity 7 76 1.0E-18 T 12-10-2018 IPR015046 Enterocin A Immunity CLSA_c17530 74503c6669712f327b4ee7816b50f213 282 SUPERFAMILY SSF56784 22 274 3.67E-57 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c17530 74503c6669712f327b4ee7816b50f213 282 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 23 243 1.1E-29 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLSA_c17530 74503c6669712f327b4ee7816b50f213 282 Gene3D G3DSA:3.30.1240.10 101 202 3.6E-60 T 12-10-2018 CLSA_c17530 74503c6669712f327b4ee7816b50f213 282 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 22 272 5.5E-51 T 12-10-2018 IPR000150 Cof family GO:0016787 CLSA_c17530 74503c6669712f327b4ee7816b50f213 282 Pfam PF08282 haloacid dehalogenase-like hydrolase 23 272 1.2E-59 T 12-10-2018 CLSA_c17530 74503c6669712f327b4ee7816b50f213 282 Gene3D G3DSA:3.40.50.1000 23 273 3.6E-60 T 12-10-2018 IPR023214 HAD superfamily CLSA_c45380 ea152d6064d161a032174317de528691 215 Pfam PF01810 LysE type translocator 21 207 1.8E-22 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CLSA_c32450 65516fc29f20eb720016ffea2a8e44c0 223 SUPERFAMILY SSF53790 2 220 5.1E-44 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CLSA_c32450 65516fc29f20eb720016ffea2a8e44c0 223 PIRSF PIRSF036427 1 223 2.1E-68 T 12-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CLSA_c32450 65516fc29f20eb720016ffea2a8e44c0 223 Gene3D G3DSA:3.40.1010.10 1 126 6.4E-34 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CLSA_c32450 65516fc29f20eb720016ffea2a8e44c0 223 Gene3D G3DSA:3.30.950.10 127 222 4.4E-17 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CLSA_c32450 65516fc29f20eb720016ffea2a8e44c0 223 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 219 9.5E-56 T 12-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CLSA_c32450 65516fc29f20eb720016ffea2a8e44c0 223 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 202 1.3E-43 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CLSA_c23200 2b6c55da5146024e65e5cdd57f2c842f 56 Pfam PF01924 Hydrogenase formation hypA family 1 50 8.7E-7 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLSA_c37360 33ac16ca8be97a5cd410a814c67dd26a 176 SUPERFAMILY SSF88659 120 171 5.79E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c37360 33ac16ca8be97a5cd410a814c67dd26a 176 Gene3D G3DSA:1.10.10.10 97 175 2.6E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c06320 b5320f43be3403acf0ad148ee4dbab4e 251 Pfam PF12730 ABC-2 family transporter protein 5 183 7.7E-8 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 126 279 2.3E-64 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 33.994 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.7E-63 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 SUPERFAMILY SSF51735 124 276 3.66E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 6.0E-29 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 SUPERFAMILY SSF53223 1 121 2.88E-30 T 12-10-2018 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 Gene3D G3DSA:3.40.50.720 5 257 1.1E-97 T 12-10-2018 CLSA_c26880 5dcafdf3a29c730039d50ff12b8a47ac 282 Gene3D G3DSA:3.40.50.10860 7 274 1.1E-97 T 12-10-2018 CLSA_c14810 a71e9fbec0994c71c7d48bf9e477041c 392 SUPERFAMILY SSF56796 40 374 2.75E-52 T 12-10-2018 CLSA_c14810 a71e9fbec0994c71c7d48bf9e477041c 392 Pfam PF13685 Iron-containing alcohol dehydrogenase 55 310 5.1E-72 T 12-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 CLSA_c14810 a71e9fbec0994c71c7d48bf9e477041c 392 Gene3D G3DSA:1.20.1090.10 199 392 1.0E-52 T 12-10-2018 CLSA_c14810 a71e9fbec0994c71c7d48bf9e477041c 392 Gene3D G3DSA:3.40.50.1970 40 198 2.2E-39 T 12-10-2018 CLSA_c14810 a71e9fbec0994c71c7d48bf9e477041c 392 PIRSF PIRSF000112 40 392 3.0E-95 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 CLSA_c31920 4e586a2737701270f9c58c4c5d76f98c 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 124 1.9E-24 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLSA_c31920 4e586a2737701270f9c58c4c5d76f98c 337 SUPERFAMILY SSF55347 130 294 5.4E-28 T 12-10-2018 CLSA_c31920 4e586a2737701270f9c58c4c5d76f98c 337 SUPERFAMILY SSF51735 3 156 3.4E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c31920 4e586a2737701270f9c58c4c5d76f98c 337 Gene3D G3DSA:3.30.360.10 139 330 1.3E-58 T 12-10-2018 CLSA_c31920 4e586a2737701270f9c58c4c5d76f98c 337 Gene3D G3DSA:3.40.50.720 2 138 5.0E-36 T 12-10-2018 CLSA_c40810 432d80d1d1e2b51846a66298b308fa3f 322 SUPERFAMILY SSF52540 16 244 1.98E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40810 432d80d1d1e2b51846a66298b308fa3f 322 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c40810 432d80d1d1e2b51846a66298b308fa3f 322 Pfam PF00005 ABC transporter 35 176 1.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c40810 432d80d1d1e2b51846a66298b308fa3f 322 Gene3D G3DSA:3.40.50.300 13 260 3.1E-59 T 12-10-2018 CLSA_c40810 432d80d1d1e2b51846a66298b308fa3f 322 SMART SM00382 44 231 8.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c36280 80d6d79c15eaee870304ff0eafabeaf6 332 Pfam PF03601 Conserved hypothetical protein 698 9 311 1.8E-86 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CLSA_c37900 a6538672edd2b1534e5dee70efcbe848 77 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 7 76 2.9E-29 T 12-10-2018 IPR018720 Domain of unknown function DUF2249 CLSA_c15750 20bc9f4d247b24ed8715faae2ac4e303 83 Pfam PF12652 CotJB protein 5 80 5.7E-25 T 12-10-2018 IPR024207 Spore coat assembly protein CotJB, domain CLSA_c04280 98975ac0efb177897f4c5214e236505e 284 Hamap MF_00188 Protease HtpX [htpX]. 7 282 27.396 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CLSA_c04280 98975ac0efb177897f4c5214e236505e 284 Pfam PF01435 Peptidase family M48 70 281 2.1E-34 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CLSA_c04280 98975ac0efb177897f4c5214e236505e 284 Gene3D G3DSA:3.30.2010.10 62 151 1.1E-31 T 12-10-2018 CLSA_c31030 87b127ae68dcb30c9a9d06306f289818 535 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 359 508 6.2E-18 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c31030 87b127ae68dcb30c9a9d06306f289818 535 Pfam PF01943 Polysaccharide biosynthesis protein 8 305 6.0E-29 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c31030 87b127ae68dcb30c9a9d06306f289818 535 PIRSF PIRSF038958 1 524 1.1E-102 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CLSA_c03520 18095fea2e9a453105af074f9936f7f9 356 Gene3D G3DSA:3.90.550.10 2 349 1.4E-109 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c03520 18095fea2e9a453105af074f9936f7f9 356 Pfam PF01050 Mannose-6-phosphate isomerase 315 351 3.9E-5 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CLSA_c03520 18095fea2e9a453105af074f9936f7f9 356 SUPERFAMILY SSF159283 285 347 3.79E-15 T 12-10-2018 CLSA_c03520 18095fea2e9a453105af074f9936f7f9 356 SUPERFAMILY SSF53448 2 279 1.58E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c03520 18095fea2e9a453105af074f9936f7f9 356 Pfam PF00483 Nucleotidyl transferase 4 278 1.4E-44 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c15370 e0129890b08030c23cca9e3846aa0f96 438 Pfam PF13786 Domain of unknown function (DUF4179) 46 131 2.4E-11 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 CLSA_c15370 e0129890b08030c23cca9e3846aa0f96 438 Gene3D G3DSA:2.60.40.1630 76 215 1.8E-7 T 12-10-2018 CLSA_c17740 d194105b3b2fadff8a1ec35f80c23340 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 65 2.2E-21 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c17740 d194105b3b2fadff8a1ec35f80c23340 68 Gene3D G3DSA:1.10.8.910 3 68 5.1E-16 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c04800 d14d5160a1c4a535a972f96b918df0f9 265 Gene3D G3DSA:3.90.1200.10 35 261 1.9E-17 T 12-10-2018 CLSA_c17030 e29bbec6357f356e8b07969151d7f9c4 175 Gene3D G3DSA:3.30.1490.190 113 173 9.7E-12 T 12-10-2018 CLSA_c17030 e29bbec6357f356e8b07969151d7f9c4 175 Gene3D G3DSA:1.10.10.10 23 107 2.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17030 e29bbec6357f356e8b07969151d7f9c4 175 SUPERFAMILY SSF46785 32 165 6.46E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c17030 e29bbec6357f356e8b07969151d7f9c4 175 Pfam PF01475 Ferric uptake regulator family 38 159 3.3E-21 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLSA_c06310 86a91ba4f59f9f7f2cea8c873fe5494d 301 Pfam PF00005 ABC transporter 20 158 7.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c06310 86a91ba4f59f9f7f2cea8c873fe5494d 301 SUPERFAMILY SSF52540 4 217 2.98E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c06310 86a91ba4f59f9f7f2cea8c873fe5494d 301 SMART SM00382 29 210 1.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c06310 86a91ba4f59f9f7f2cea8c873fe5494d 301 Gene3D G3DSA:3.40.50.300 4 227 5.4E-54 T 12-10-2018 CLSA_c16180 f715181446c2baddca31d87d4997177b 250 SUPERFAMILY SSF52540 1 213 1.65E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c16180 f715181446c2baddca31d87d4997177b 250 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 27.966 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CLSA_c16180 f715181446c2baddca31d87d4997177b 250 Pfam PF13500 AAA domain 3 214 8.1E-41 T 12-10-2018 CLSA_c16180 f715181446c2baddca31d87d4997177b 250 PIRSF PIRSF006755 1 234 1.4E-67 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CLSA_c16180 f715181446c2baddca31d87d4997177b 250 Gene3D G3DSA:3.40.50.300 2 225 5.4E-58 T 12-10-2018 CLSA_c16180 f715181446c2baddca31d87d4997177b 250 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 180 7.3E-47 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CLSA_c26710 328eb48aa3103428d6c63ca4c5e5c0e6 408 Pfam PF00872 Transposase, Mutator family 11 381 2.0E-113 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c26710 328eb48aa3103428d6c63ca4c5e5c0e6 408 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLSA_c20120 7d3e5b2ebb8c24d581fc22dbd042ee7f 223 Pfam PF00005 ABC transporter 23 169 4.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c20120 7d3e5b2ebb8c24d581fc22dbd042ee7f 223 SUPERFAMILY SSF52540 3 221 2.53E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c20120 7d3e5b2ebb8c24d581fc22dbd042ee7f 223 Gene3D G3DSA:3.40.50.300 1 223 1.5E-64 T 12-10-2018 CLSA_c20120 7d3e5b2ebb8c24d581fc22dbd042ee7f 223 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c20120 7d3e5b2ebb8c24d581fc22dbd042ee7f 223 SMART SM00382 32 218 5.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c02160 d1b2bd9a58cca646a577eea6a215c539 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.835 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02160 d1b2bd9a58cca646a577eea6a215c539 132 SUPERFAMILY SSF56047 2 132 6.8E-48 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02160 d1b2bd9a58cca646a577eea6a215c539 132 Gene3D G3DSA:3.30.1490.10 75 132 6.6E-28 T 12-10-2018 CLSA_c02160 d1b2bd9a58cca646a577eea6a215c539 132 Pfam PF00410 Ribosomal protein S8 5 132 3.2E-51 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02160 d1b2bd9a58cca646a577eea6a215c539 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLSA_c02160 d1b2bd9a58cca646a577eea6a215c539 132 Gene3D G3DSA:3.30.1370.30 4 74 4.8E-27 T 12-10-2018 CLSA_c24440 b89465881daa520646e73169f0c6f1db 91 SUPERFAMILY SSF46689 1 89 8.6E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c24440 b89465881daa520646e73169f0c6f1db 91 Pfam PF08765 Mor transcription activator family 12 89 3.1E-6 T 12-10-2018 IPR014875 Mor transcription activator CLSA_c06940 a73c5f52d549479a15fe548889594997 206 Pfam PF04892 VanZ like family 43 162 1.2E-23 T 12-10-2018 IPR006976 VanZ-like CLSA_c43340 53e6bd23d60c565a7cbb4ff9d6da3deb 250 Gene3D G3DSA:3.40.50.150 13 249 4.0E-66 T 12-10-2018 CLSA_c43340 53e6bd23d60c565a7cbb4ff9d6da3deb 250 SUPERFAMILY SSF53335 21 205 1.59E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c43340 53e6bd23d60c565a7cbb4ff9d6da3deb 250 Pfam PF05175 Methyltransferase small domain 38 141 7.0E-9 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CLSA_c05820 42048215e1f846f107cee262d1a2861e 441 PIRSF PIRSF006603 1 440 1.4E-97 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c05820 42048215e1f846f107cee262d1a2861e 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 410 1.7E-70 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c05820 42048215e1f846f107cee262d1a2861e 441 Pfam PF01554 MatE 239 398 8.6E-30 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c05820 42048215e1f846f107cee262d1a2861e 441 Pfam PF01554 MatE 21 182 2.4E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:2.40.420.20 415 466 8.0E-26 T 12-10-2018 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 93 354 1.8E-12 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:2.40.30.170 80 90 1.5E-17 T 12-10-2018 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:1.10.287.470 207 276 8.0E-26 T 12-10-2018 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:1.10.287.470 125 191 1.5E-17 T 12-10-2018 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:2.40.50.100 91 124 1.5E-17 T 12-10-2018 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:2.40.50.100 277 308 8.0E-26 T 12-10-2018 CLSA_c10550 6b4094ec0d726d78f0507ff98bfaad1d 494 Gene3D G3DSA:2.40.30.170 310 414 8.0E-26 T 12-10-2018 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 Pfam PF00202 Aminotransferase class-III 38 440 3.6E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 Gene3D G3DSA:3.90.1150.10 17 440 7.6E-165 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 Gene3D G3DSA:3.40.640.10 73 339 7.6E-165 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 24 442 1.3E-162 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 SUPERFAMILY SSF53383 37 444 4.39E-133 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 PIRSF PIRSF000521 1 144 1.1E-10 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c08630 60e0bf67aec098d37533b6379ba473db 446 PIRSF PIRSF000521 138 445 1.6E-49 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLSA_c05530 17028337c3ff13d87e8daf0efcc74aa8 201 Pfam PF00293 NUDIX domain 29 137 1.1E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CLSA_c05530 17028337c3ff13d87e8daf0efcc74aa8 201 Gene3D G3DSA:3.90.79.10 1 200 6.6E-44 T 12-10-2018 CLSA_c05530 17028337c3ff13d87e8daf0efcc74aa8 201 SUPERFAMILY SSF55811 7 193 4.87E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CLSA_c05530 17028337c3ff13d87e8daf0efcc74aa8 201 ProSitePatterns PS00893 Nudix box signature. 62 83 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLSA_c09830 34f4121ed99aeae48a67bd9026b4b50c 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 100 4.7E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLSA_c09830 34f4121ed99aeae48a67bd9026b4b50c 105 Gene3D G3DSA:3.40.50.2300 1 105 9.9E-26 T 12-10-2018 CLSA_c09830 34f4121ed99aeae48a67bd9026b4b50c 105 SUPERFAMILY SSF52794 1 89 2.88E-21 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 CLSA_c23780 581b4536390e11da1c48f6bfc4f9794f 208 Gene3D G3DSA:1.20.58.220 11 208 1.9E-63 T 12-10-2018 IPR038078 PhoU-like domain superfamily CLSA_c23780 581b4536390e11da1c48f6bfc4f9794f 208 Pfam PF01865 Protein of unknown function DUF47 9 205 2.3E-23 T 12-10-2018 IPR018445 Putative phosphate transport regulator CLSA_c44460 d3aae3a56bfda60544d9546b84fb5c52 211 Pfam PF04647 Accessory gene regulator B 13 188 3.0E-36 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c44460 d3aae3a56bfda60544d9546b84fb5c52 211 SMART SM00793 14 197 2.4E-56 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c44460 d3aae3a56bfda60544d9546b84fb5c52 211 Hamap MF_00784 Accessory gene regulator protein B [agrB]. 11 197 16.846 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLSA_c01240 2edba93e59234c4bf997b086274f6d12 134 SMART SM00316 4 73 1.2E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 CLSA_c01240 2edba93e59234c4bf997b086274f6d12 134 Gene3D G3DSA:2.40.50.140 4 77 2.4E-26 T 12-10-2018 CLSA_c01240 2edba93e59234c4bf997b086274f6d12 134 Pfam PF00575 S1 RNA binding domain 4 73 5.7E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 CLSA_c01240 2edba93e59234c4bf997b086274f6d12 134 SUPERFAMILY SSF50249 5 83 2.01E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 PIRSF PIRSF006614 1 120 1.0E-55 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 118 1.2E-57 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 SUPERFAMILY SSF52335 1 117 4.97E-49 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 Pfam PF02142 MGS-like domain 14 107 7.1E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 33.57 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 SMART SM00851 14 107 5.5E-23 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain CLSA_c00410 27441b9cc0454f5f0536a6ae666af6fb 120 Gene3D G3DSA:3.40.50.1380 1 120 1.1E-53 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CLSA_c14160 784263aba1a6466b215f988e294df140 329 Pfam PF01594 AI-2E family transporter 19 325 5.8E-34 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like CLSA_c24730 7671163c67c451598f0d0ccffec49764 211 Gene3D G3DSA:3.40.225.10 1 211 1.2E-44 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c24730 7671163c67c451598f0d0ccffec49764 211 SUPERFAMILY SSF53639 2 191 2.16E-35 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c24730 7671163c67c451598f0d0ccffec49764 211 SMART SM01007 7 185 4.7E-27 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c24730 7671163c67c451598f0d0ccffec49764 211 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 185 3.8E-31 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c12340 d08a9add64debad1d0cd2d56bfbdfacd 421 Pfam PF00534 Glycosyl transferases group 1 229 391 1.5E-36 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 CLSA_c12340 d08a9add64debad1d0cd2d56bfbdfacd 421 Gene3D G3DSA:3.40.50.2000 233 401 4.0E-37 T 12-10-2018 CLSA_c12340 d08a9add64debad1d0cd2d56bfbdfacd 421 Gene3D G3DSA:3.40.50.2000 18 200 4.7E-24 T 12-10-2018 CLSA_c12340 d08a9add64debad1d0cd2d56bfbdfacd 421 Pfam PF13439 Glycosyltransferase Family 4 84 192 6.4E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLSA_c12340 d08a9add64debad1d0cd2d56bfbdfacd 421 SUPERFAMILY SSF53756 8 419 1.03E-65 T 12-10-2018 CLSA_c10220 64e8f468a883a247c89ad3b324973e99 156 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 147 5.8E-41 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c10220 64e8f468a883a247c89ad3b324973e99 156 Pfam PF02502 Ribose/Galactose Isomerase 3 142 1.6E-44 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c10220 64e8f468a883a247c89ad3b324973e99 156 PIRSF PIRSF005384 1 149 1.8E-47 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c10220 64e8f468a883a247c89ad3b324973e99 156 Gene3D G3DSA:3.40.1400.10 1 155 4.5E-52 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c10220 64e8f468a883a247c89ad3b324973e99 156 SUPERFAMILY SSF89623 1 144 1.27E-45 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLSA_c31020 b5f259b6ea37a91319c741b957c0fdfd 501 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 8 492 2.3E-156 T 12-10-2018 IPR014249 Sporulation stage V protein B CLSA_c31020 b5f259b6ea37a91319c741b957c0fdfd 501 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 493 1.4E-11 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c31020 b5f259b6ea37a91319c741b957c0fdfd 501 PIRSF PIRSF038958 3 496 5.5E-75 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CLSA_c31020 b5f259b6ea37a91319c741b957c0fdfd 501 Pfam PF01943 Polysaccharide biosynthesis protein 9 307 8.0E-27 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c27960 29ec1d026bfc29c1796e878ebe424df3 256 Pfam PF06738 Putative threonine/serine exporter 11 246 1.6E-73 T 12-10-2018 IPR010619 Putative threonine/serine exporter CLSA_c32400 ec63559054c4cddcb922f3527d0ef3a8 188 SUPERFAMILY SSF140478 28 176 1.15E-56 T 12-10-2018 IPR023353 LemA-like domain superfamily CLSA_c32400 ec63559054c4cddcb922f3527d0ef3a8 188 Gene3D G3DSA:1.20.1440.20 20 186 4.8E-71 T 12-10-2018 IPR023353 LemA-like domain superfamily CLSA_c32400 ec63559054c4cddcb922f3527d0ef3a8 188 Pfam PF04011 LemA family 10 186 3.0E-72 T 12-10-2018 IPR007156 LemA CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 Gene3D G3DSA:1.10.10.10 105 162 1.0E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 Gene3D G3DSA:1.10.1740.10 8 104 1.3E-15 T 12-10-2018 CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 Pfam PF04542 Sigma-70 region 2 17 81 1.8E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 156 7.4E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 SUPERFAMILY SSF88946 12 96 3.14E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 SUPERFAMILY SSF88659 98 158 9.16E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c37270 4870ae810a2a8354f951e86d81bd15c3 163 Pfam PF08281 Sigma-70, region 4 106 150 1.4E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLSA_c40790 811c34020ab176114cf5d163d3a2094a 243 Pfam PF12730 ABC-2 family transporter protein 4 179 2.3E-16 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c03580 893a7ff9abb0069a729572a43994b6a5 259 SUPERFAMILY SSF52402 1 255 1.47E-80 T 12-10-2018 CLSA_c03580 893a7ff9abb0069a729572a43994b6a5 259 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CLSA_c03580 893a7ff9abb0069a729572a43994b6a5 259 PIRSF PIRSF000090 1 259 1.1E-91 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CLSA_c03580 893a7ff9abb0069a729572a43994b6a5 259 SMART SM00893 22 211 2.1E-60 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03580 893a7ff9abb0069a729572a43994b6a5 259 Pfam PF01012 Electron transfer flavoprotein domain 22 204 1.0E-49 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLSA_c03580 893a7ff9abb0069a729572a43994b6a5 259 Gene3D G3DSA:3.40.50.620 1 259 3.4E-94 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 Pfam PF07690 Major Facilitator Superfamily 13 402 9.9E-55 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 Gene3D G3DSA:1.20.1720.10 8 238 5.8E-44 T 12-10-2018 CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 SUPERFAMILY SSF103473 4 456 2.35E-65 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 11 35 1.4E-14 T 12-10-2018 CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 330 350 1.4E-14 T 12-10-2018 CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 1.4E-14 T 12-10-2018 CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 102 122 1.4E-14 T 12-10-2018 CLSA_c21710 8d1747bab901d8a28236d33d062bf922 471 Gene3D G3DSA:1.20.1250.20 252 466 1.7E-25 T 12-10-2018 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 3.9E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 3.9E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 3.9E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 SUPERFAMILY SSF58104 232 569 1.66E-56 T 12-10-2018 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 521 3.8E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 SMART SM00283 293 569 2.1E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 182 9.0E-43 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CLSA_c07240 e06ed2cadccec89d89d4dd5b95e41368 570 Gene3D G3DSA:1.10.287.950 256 569 6.5E-59 T 12-10-2018 CLSA_c01650 69839b5169d0369dd9ead4491e5d685e 57 Gene3D G3DSA:3.30.70.100 1 57 9.2E-7 T 12-10-2018 CLSA_c01650 69839b5169d0369dd9ead4491e5d685e 57 SUPERFAMILY SSF55008 1 54 8.38E-8 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c15820 2abfeea78a6f2c2760a039d72e3c42fb 266 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 9 265 4.2E-61 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 CLSA_c15820 2abfeea78a6f2c2760a039d72e3c42fb 266 Pfam PF02811 PHP domain 9 219 9.2E-14 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c15820 2abfeea78a6f2c2760a039d72e3c42fb 266 Gene3D G3DSA:3.20.20.140 8 266 1.7E-64 T 12-10-2018 CLSA_c15820 2abfeea78a6f2c2760a039d72e3c42fb 266 SUPERFAMILY SSF89550 8 264 1.31E-37 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c18050 65c485b16900b4f84b512a9c6d67978b 158 Gene3D G3DSA:3.40.930.10 4 154 1.5E-46 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c18050 65c485b16900b4f84b512a9c6d67978b 158 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 2.4E-36 T 12-10-2018 IPR002178 PTS EIIA type-2 domain CLSA_c18050 65c485b16900b4f84b512a9c6d67978b 158 SUPERFAMILY SSF55804 4 152 6.02E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 CLSA_c13350 b6b3e6ec45593dbecd9fcb7bc0e7e815 214 SUPERFAMILY SSF53335 5 210 8.14E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c13350 b6b3e6ec45593dbecd9fcb7bc0e7e815 214 Pfam PF01596 O-methyltransferase 38 213 3.7E-34 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CLSA_c13350 b6b3e6ec45593dbecd9fcb7bc0e7e815 214 Gene3D G3DSA:3.40.50.150 3 214 2.6E-59 T 12-10-2018 CLSA_c36380 00e89024e5a029d6a4913c8534726649 208 SUPERFAMILY SSF52317 4 177 7.64E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c36380 00e89024e5a029d6a4913c8534726649 208 Pfam PF01965 DJ-1/PfpI family 4 175 5.0E-30 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CLSA_c36380 00e89024e5a029d6a4913c8534726649 208 Gene3D G3DSA:3.40.50.880 1 208 5.7E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c28560 3332245af68e03f4b92e0879af6b9d1c 411 Pfam PF04932 O-Antigen ligase 202 340 1.7E-7 T 12-10-2018 IPR007016 O-antigen ligase-related CLSA_c07350 a8cce1ca7b852bc0d7c81215a3e59614 266 Pfam PF08543 Phosphomethylpyrimidine kinase 11 255 2.4E-99 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CLSA_c07350 a8cce1ca7b852bc0d7c81215a3e59614 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 257 9.4E-103 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c07350 a8cce1ca7b852bc0d7c81215a3e59614 266 Gene3D G3DSA:3.40.1190.20 1 264 1.3E-105 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c07350 a8cce1ca7b852bc0d7c81215a3e59614 266 SUPERFAMILY SSF53613 3 261 7.33E-84 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c13360 cb9555b512e32112702da46f9e982184 411 Pfam PF01136 Peptidase family U32 76 308 3.4E-97 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c13360 cb9555b512e32112702da46f9e982184 411 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c13360 cb9555b512e32112702da46f9e982184 411 Gene3D G3DSA:2.40.30.10 318 406 8.9E-20 T 12-10-2018 CLSA_c13360 cb9555b512e32112702da46f9e982184 411 Pfam PF16325 Peptidase family U32 C-terminal domain 320 402 1.0E-17 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal CLSA_c42330 6f6e7f7beb641c63df3a2194ac04954e 293 Gene3D G3DSA:3.90.550.10 1 228 6.6E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42330 6f6e7f7beb641c63df3a2194ac04954e 293 SUPERFAMILY SSF53448 7 283 2.7E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c42330 6f6e7f7beb641c63df3a2194ac04954e 293 Pfam PF00535 Glycosyl transferase family 2 9 180 1.8E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c20580 16f290d539d38d120c047e5c2a590e8f 117 Gene3D G3DSA:3.40.50.12740 3 117 1.5E-33 T 12-10-2018 CLSA_c20580 16f290d539d38d120c047e5c2a590e8f 117 SUPERFAMILY SSF52172 1 116 6.83E-34 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20580 16f290d539d38d120c047e5c2a590e8f 117 Pfam PF00072 Response regulator receiver domain 4 114 3.9E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20580 16f290d539d38d120c047e5c2a590e8f 117 SMART SM00448 2 114 1.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c45370 16f3426517258343a8e1948938920ade 80 Pfam PF11823 Protein of unknown function (DUF3343) 3 69 1.8E-20 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 CLSA_c39620 b77f2dd1d31a02af15388b70bea5b792 639 Pfam PF01973 Protein of unknown function DUF115 214 382 1.9E-39 T 12-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CLSA_c39320 9afef6d3b43b04f80880c9606447171a 145 Pfam PF02050 Flagellar FliJ protein 21 139 1.5E-20 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CLSA_c39320 9afef6d3b43b04f80880c9606447171a 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 141 1.1E-20 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CLSA_c23830 b2fde1cf254d28fb121c08aa8a8d1616 131 Pfam PF17032 zinc-ribbon family 23 126 1.8E-27 T 12-10-2018 IPR031493 Zinc-ribbon 15 CLSA_c24950 42cc3def9b11076cbd21fa932d644e0b 164 Pfam PF01930 Domain of unknown function DUF83 4 164 1.1E-44 T 12-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 CLSA_c44740 0369ae6605727eacce48e07d61d46eb5 314 Gene3D G3DSA:3.90.1200.10 120 307 9.0E-18 T 12-10-2018 CLSA_c44740 0369ae6605727eacce48e07d61d46eb5 314 Pfam PF01636 Phosphotransferase enzyme family 36 267 5.9E-23 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase CLSA_c44740 0369ae6605727eacce48e07d61d46eb5 314 SUPERFAMILY SSF56112 23 285 5.65E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c44740 0369ae6605727eacce48e07d61d46eb5 314 Gene3D G3DSA:3.30.200.20 13 110 9.0E-6 T 12-10-2018 CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 SMART SM00490 258 339 7.7E-23 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 Gene3D G3DSA:3.40.50.300 1 209 2.5E-58 T 12-10-2018 CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 Gene3D G3DSA:3.40.50.300 213 407 1.0E-38 T 12-10-2018 CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 Pfam PF00271 Helicase conserved C-terminal domain 230 339 1.9E-23 T 12-10-2018 IPR001650 Helicase, C-terminal CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 SMART SM00487 22 222 2.1E-44 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 SUPERFAMILY SSF52540 71 358 3.01E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.1E-35 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLSA_c17620 cb17e604a3e3902bea625e52a10653b8 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLSA_c13500 88d342a4ecc1dbde88eaae6e3eca7ffd 297 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 15 294 1.7E-86 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CLSA_c13500 88d342a4ecc1dbde88eaae6e3eca7ffd 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 294 2.1E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c13500 88d342a4ecc1dbde88eaae6e3eca7ffd 297 SUPERFAMILY SSF161098 18 292 1.96E-37 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c13500 88d342a4ecc1dbde88eaae6e3eca7ffd 297 Gene3D G3DSA:1.10.3720.10 73 296 2.5E-36 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c10440 13c09b88488b972dc4aae24ef1b0aea2 612 Gene3D G3DSA:1.20.1740.10 48 473 1.8E-18 T 12-10-2018 CLSA_c10440 13c09b88488b972dc4aae24ef1b0aea2 612 Pfam PF13520 Amino acid permease 57 428 4.1E-26 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c08080 01915ccb82263ebd765f15cd9e4cd128 620 SMART SM00331 8 240 0.003 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c08080 01915ccb82263ebd765f15cd9e4cd128 620 Gene3D G3DSA:3.60.40.10 5 238 7.9E-24 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c08080 01915ccb82263ebd765f15cd9e4cd128 620 SUPERFAMILY SSF81606 8 240 4.58E-24 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c39260 9715dee280774337320c76fecb5df523 162 Pfam PF03748 Flagellar basal body-associated protein FliL 64 162 3.2E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CLSA_c01170 54add817f6b02355a34cdae3d762092c 512 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 354 497 9.3E-24 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c01170 54add817f6b02355a34cdae3d762092c 512 Pfam PF01943 Polysaccharide biosynthesis protein 7 302 5.6E-33 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c01170 54add817f6b02355a34cdae3d762092c 512 PIRSF PIRSF038958 1 511 1.2E-143 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 Gene3D G3DSA:3.40.50.7700 1 158 2.3E-63 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 PIRSF PIRSF001338 1 158 2.4E-62 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 Pfam PF00731 AIR carboxylase 2 147 2.5E-61 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 153 30.355 T 12-10-2018 IPR033747 Class I PurE CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 154 7.8E-59 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 SMART SM01001 1 149 6.6E-86 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLSA_c12970 ee3a767570b92e64fe9897f42465f145 159 SUPERFAMILY SSF52255 2 155 9.29E-59 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CLSA_c31280 7b4ccb2e974c6ac55561a49fdc4232e9 109 Gene3D G3DSA:3.10.20.400 1 97 2.5E-40 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CLSA_c31280 7b4ccb2e974c6ac55561a49fdc4232e9 109 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 7 109 29.607 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CLSA_c31280 7b4ccb2e974c6ac55561a49fdc4232e9 109 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 106 2.4E-35 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CLSA_c31280 7b4ccb2e974c6ac55561a49fdc4232e9 109 SUPERFAMILY SSF141734 9 108 7.45E-48 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CLSA_c31280 7b4ccb2e974c6ac55561a49fdc4232e9 109 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 106 7.0E-19 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF01473 Putative cell wall binding repeat 258 276 9.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF01473 Putative cell wall binding repeat 357 375 1.6E-6 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF01473 Putative cell wall binding repeat 305 320 2.3E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF01473 Putative cell wall binding repeat 167 183 0.44 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF01473 Putative cell wall binding repeat 332 344 0.001 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF01473 Putative cell wall binding repeat 231 245 2.8E-4 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Gene3D G3DSA:3.80.10.10 29 162 1.0E-8 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 SUPERFAMILY SSF69360 164 393 5.16E-47 T 12-10-2018 CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Gene3D G3DSA:2.10.270.10 251 393 7.5E-40 T 12-10-2018 CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Pfam PF13306 Leucine rich repeats (6 copies) 101 150 1.7E-6 T 12-10-2018 IPR026906 Leucine rich repeat 5 CLSA_c35040 ad577a08e572a146f56d25a0fdd51bb6 394 Gene3D G3DSA:2.10.270.10 163 250 2.5E-16 T 12-10-2018 CLSA_c19250 2ca4f6c653b39a36109e2e45e51643d6 483 Gene3D G3DSA:3.40.50.300 350 482 2.2E-8 T 12-10-2018 CLSA_c13950 791401d980bb5f51e570f46d5cccc755 109 Hamap MF_00245 UPF0122 protein . 1 103 19.543 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLSA_c13950 791401d980bb5f51e570f46d5cccc755 109 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 1 95 5.8E-29 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLSA_c13950 791401d980bb5f51e570f46d5cccc755 109 Gene3D G3DSA:1.10.10.10 1 109 5.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c13950 791401d980bb5f51e570f46d5cccc755 109 SUPERFAMILY SSF88659 1 97 8.41E-28 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CLSA_c19210 9ac9bd17d0403f6780de89ab76bcc4eb 472 Pfam PF14284 PcfJ-like protein 324 452 7.9E-20 T 12-10-2018 IPR025586 PcfJ-like protein CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 Gene3D G3DSA:3.40.50.2300 1 131 7.1E-37 T 12-10-2018 CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 3.8E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 Pfam PF00072 Response regulator receiver domain 6 114 2.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 SMART SM00448 4 114 2.9E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 SMART SM00862 152 228 1.3E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 SUPERFAMILY SSF46894 129 229 1.76E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 SUPERFAMILY SSF52172 1 125 5.83E-41 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c02440 637769fe93b7e28c0b02444486f3128f 232 Gene3D G3DSA:1.10.10.10 132 232 1.6E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c33180 1d3f66c964ff71bf5b696084efc3e2d3 399 Gene3D G3DSA:1.20.1530.10 11 397 4.8E-140 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily CLSA_c33180 1d3f66c964ff71bf5b696084efc3e2d3 399 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 16 387 6.1E-127 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CLSA_c33180 1d3f66c964ff71bf5b696084efc3e2d3 399 Pfam PF06965 Na+/H+ antiporter 1 16 388 9.9E-146 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CLSA_c33180 1d3f66c964ff71bf5b696084efc3e2d3 399 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 13 396 22.306 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CLSA_c26610 477a1052171001344e97c3c5b4ed1b0e 432 Pfam PF00860 Permease family 26 395 8.9E-98 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CLSA_c26610 477a1052171001344e97c3c5b4ed1b0e 432 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 342 362 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLSA_c26610 477a1052171001344e97c3c5b4ed1b0e 432 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 417 1.7E-120 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLSA_c11170 cc6ed6bb2de97b651e14a954b559bd8a 594 Gene3D G3DSA:3.30.565.10 442 592 1.0E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11170 cc6ed6bb2de97b651e14a954b559bd8a 594 Gene3D G3DSA:1.10.287.130 346 441 2.0E-8 T 12-10-2018 CLSA_c11170 cc6ed6bb2de97b651e14a954b559bd8a 594 SMART SM00387 483 590 1.4E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c11170 cc6ed6bb2de97b651e14a954b559bd8a 594 SUPERFAMILY SSF55874 442 588 2.88E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c11170 cc6ed6bb2de97b651e14a954b559bd8a 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 588 6.6E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c11170 cc6ed6bb2de97b651e14a954b559bd8a 594 Gene3D G3DSA:3.30.450.20 227 345 1.4E-7 T 12-10-2018 CLSA_c33140 489b4a3373944ffe80afb41c8d61041a 335 Pfam PF16472 Domain of unknown function (DUF5050) 53 225 2.6E-17 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 CLSA_c33140 489b4a3373944ffe80afb41c8d61041a 335 SUPERFAMILY SSF63825 107 282 9.15E-8 T 12-10-2018 CLSA_c04760 39c9b9a4d79bfa3de48aa8177278769f 123 SUPERFAMILY SSF49464 32 94 9.42E-8 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CLSA_c04760 39c9b9a4d79bfa3de48aa8177278769f 123 Gene3D G3DSA:2.60.40.1120 32 107 2.0E-5 T 12-10-2018 CLSA_c12710 f08c62eb385cf8b37d218288cf62700d 583 Gene3D G3DSA:3.90.228.20 345 407 6.9E-7 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CLSA_c12710 f08c62eb385cf8b37d218288cf62700d 583 Gene3D G3DSA:3.40.449.10 323 344 6.9E-7 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CLSA_c12710 f08c62eb385cf8b37d218288cf62700d 583 Pfam PF01293 Phosphoenolpyruvate carboxykinase 322 409 2.6E-6 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CLSA_c12710 f08c62eb385cf8b37d218288cf62700d 583 SUPERFAMILY SSF53795 345 554 1.46E-17 T 12-10-2018 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 Pfam PF00083 Sugar (and other) transporter 19 459 1.2E-107 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 SUPERFAMILY SSF103473 11 456 8.37E-74 T 12-10-2018 IPR036259 MFS transporter superfamily CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 Gene3D G3DSA:1.20.1250.20 11 463 1.4E-125 T 12-10-2018 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 PRINTS PR00171 Sugar transporter signature 270 280 9.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 PRINTS PR00171 Sugar transporter signature 360 381 9.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 PRINTS PR00171 Sugar transporter signature 25 35 9.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 PRINTS PR00171 Sugar transporter signature 110 129 9.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 PRINTS PR00171 Sugar transporter signature 383 395 9.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c12170 9f8e8fc5c812603d533b9206016060b8 477 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 18 455 2.5E-104 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 PIRSF PIRSF006160 3 152 9.4E-59 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 5 146 1.7E-49 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 Gene3D G3DSA:3.30.1360.80 1 151 5.8E-54 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 3 150 33.159 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 1.0E-35 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 51 69 1.0E-35 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 30 48 1.0E-35 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 116 135 1.0E-35 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 7 25 1.0E-35 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 10 149 2.0E-57 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLSA_c30740 2ad5e26f427485ac67fe93fcafdf1d1e 153 SUPERFAMILY SSF63411 4 149 1.74E-57 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLSA_c41140 78c0180e2c9678f21b6712121caebda9 229 Pfam PF00149 Calcineurin-like phosphoesterase 6 196 1.9E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c41140 78c0180e2c9678f21b6712121caebda9 229 SUPERFAMILY SSF56300 1 222 2.53E-26 T 12-10-2018 CLSA_c41140 78c0180e2c9678f21b6712121caebda9 229 PIRSF PIRSF033094 1 229 3.1E-97 T 12-10-2018 IPR014578 Predicted phosphoesterase, CT488 type CLSA_c22860 63538ec3a8f730539446eb84a3274d28 134 Pfam PF12788 YmaF family 26 122 1.4E-41 T 12-10-2018 IPR024307 YmaF CLSA_c07070 eaaebc5a89ca0d45738a0c1b1f94b567 186 Gene3D G3DSA:2.40.320.10 3 174 9.6E-19 T 12-10-2018 CLSA_c07070 eaaebc5a89ca0d45738a0c1b1f94b567 186 SMART SM01118 1 175 6.0E-4 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CLSA_c07070 eaaebc5a89ca0d45738a0c1b1f94b567 186 SUPERFAMILY SSF55154 3 173 1.01E-26 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CLSA_c07070 eaaebc5a89ca0d45738a0c1b1f94b567 186 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 3 153 4.0E-55 T 12-10-2018 CLSA_c07070 eaaebc5a89ca0d45738a0c1b1f94b567 186 Pfam PF01928 CYTH domain 1 156 1.2E-15 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 257 5.8E-55 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 SUPERFAMILY SSF53335 67 263 1.19E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 Gene3D G3DSA:3.40.50.150 66 266 2.2E-59 T 12-10-2018 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 PRINTS PR00996 Glutamate methyltransferase family signature 223 246 4.4E-35 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 PRINTS PR00996 Glutamate methyltransferase family signature 99 119 4.4E-35 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 PRINTS PR00996 Glutamate methyltransferase family signature 133 149 4.4E-35 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 4.4E-35 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 PRINTS PR00996 Glutamate methyltransferase family signature 204 218 4.4E-35 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c23260 6f07293a7ab60cfadf1c9093d4e6c0eb 270 SMART SM00138 3 264 1.3E-65 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLSA_c24450 b72490f4dc59a79c7ec34d4c101a676c 465 PIRSF PIRSF006060 1 464 6.9E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c24450 b72490f4dc59a79c7ec34d4c101a676c 465 Pfam PF00324 Amino acid permease 14 448 2.0E-105 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CLSA_c24450 b72490f4dc59a79c7ec34d4c101a676c 465 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CLSA_c24450 b72490f4dc59a79c7ec34d4c101a676c 465 Gene3D G3DSA:1.20.1740.10 5 461 5.7E-56 T 12-10-2018 CLSA_c15720 baff9750f0e68080d3d4638e5adfef1e 206 Pfam PF12672 Protein of unknown function (DUF3793) 23 195 2.1E-45 T 12-10-2018 IPR024523 Protein of unknown function DUF3793 CLSA_c24110 e6d5bccbf90145e504b2437f48a4c149 261 Gene3D G3DSA:1.10.3720.10 58 260 2.4E-25 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c24110 e6d5bccbf90145e504b2437f48a4c149 261 SUPERFAMILY SSF161098 65 252 3.27E-26 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c24110 e6d5bccbf90145e504b2437f48a4c149 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 256 8.2E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c35230 bf77671b785bd74b6de576ab3e9377fd 275 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 198 267 4.6E-14 T 12-10-2018 IPR026834 LHH CLSA_c25430 e1dbbb74201d68420684d2f96acf0bc4 247 Pfam PF01061 ABC-2 type transporter 3 210 5.0E-17 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLSA_c21420 1f862f840166e9b950c60898cf100098 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 316 5.0E-35 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c15760 32db08ae48bbd7df5e5cca117631fab6 83 Pfam PF11007 Spore coat associated protein JA (CotJA) 42 75 2.7E-12 T 12-10-2018 IPR020256 Spore coat protein CotJA CLSA_c41360 c3291bddf3e1ba56444bdc330601b8c5 283 Pfam PF13240 zinc-ribbon domain 2 23 2.6E-7 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 CLSA_c16700 3025ff5227fc9b9ab043cc10293f3668 358 SUPERFAMILY SSF53822 45 353 1.99E-64 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c16700 3025ff5227fc9b9ab043cc10293f3668 358 Gene3D G3DSA:3.40.50.2300 49 333 7.8E-85 T 12-10-2018 CLSA_c16700 3025ff5227fc9b9ab043cc10293f3668 358 Pfam PF13407 Periplasmic binding protein domain 49 332 2.3E-44 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c16700 3025ff5227fc9b9ab043cc10293f3668 358 Gene3D G3DSA:3.40.50.2300 158 311 7.8E-85 T 12-10-2018 CLSA_c35240 22f2e697089ac5824eb2ddc1ec1c8eb0 304 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 16 299 2.8E-56 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA CLSA_c35240 22f2e697089ac5824eb2ddc1ec1c8eb0 304 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 242 9.8E-76 T 12-10-2018 CLSA_c09030 7711c392edc197d992a1466c0516eecd 408 SUPERFAMILY SSF116734 3 201 1.96E-39 T 12-10-2018 CLSA_c09030 7711c392edc197d992a1466c0516eecd 408 Pfam PF01420 Type I restriction modification DNA specificity domain 3 179 4.9E-18 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLSA_c09030 7711c392edc197d992a1466c0516eecd 408 Gene3D G3DSA:3.90.220.20 2 192 7.1E-36 T 12-10-2018 CLSA_c09030 7711c392edc197d992a1466c0516eecd 408 Gene3D G3DSA:3.90.220.20 203 405 1.9E-15 T 12-10-2018 CLSA_c09030 7711c392edc197d992a1466c0516eecd 408 SUPERFAMILY SSF116734 215 407 5.89E-15 T 12-10-2018 CLSA_c21010 2b83c3ce9e4c0dc33ce74c69583542ca 486 ProDom PD141294 TRANSMEMBRANE MEMBRANE PROTEIN GTRIV-SF YFDI PREDICTED 15 462 1.0E-70 T 12-10-2018 CLSA_c28110 c72e26f49450c672d507567302329bc9 94 Gene3D G3DSA:1.20.120.20 1 92 1.5E-7 T 12-10-2018 CLSA_c21460 606a87d58eb35f98071dfac8360ec983 201 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 177 9.3E-24 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLSA_c44750 53a518f4592df81f66867bd68bdbac72 52 Pfam PF07561 Domain of Unknown Function (DUF1540) 7 49 2.0E-13 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 CLSA_c04910 c353eeaf4ebf7b0a2915e87f79208f07 253 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 42 192 1.5E-58 T 12-10-2018 IPR014202 Sporulation stage II, protein R CLSA_c04910 c353eeaf4ebf7b0a2915e87f79208f07 253 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 62 187 2.8E-52 T 12-10-2018 IPR014202 Sporulation stage II, protein R CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 Gene3D G3DSA:2.40.30.10 1 91 8.4E-25 T 12-10-2018 CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 221 256 4.1E-12 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 PIRSF PIRSF006816 1 263 2.5E-65 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 Pfam PF00175 Oxidoreductase NAD-binding domain 110 205 1.6E-6 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 SUPERFAMILY SSF63380 1 91 1.22E-20 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 Gene3D G3DSA:3.40.50.80 107 211 1.0E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c08800 726ab18078b1ded624489fc2d247199e 296 SUPERFAMILY SSF52343 104 256 1.31E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 PRINTS PR01011 Glutathione peroxidase family signature 20 37 8.8E-17 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 PRINTS PR01011 Glutathione peroxidase family signature 55 71 8.8E-17 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 PRINTS PR01011 Glutathione peroxidase family signature 140 149 8.8E-17 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 58 65 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 ProSitePatterns PS00460 Glutathione peroxidases active site. 22 37 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 Gene3D G3DSA:3.40.30.10 1 179 5.5E-71 T 12-10-2018 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 PIRSF PIRSF000303 1 179 6.0E-63 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 SUPERFAMILY SSF52833 2 177 1.08E-58 T 12-10-2018 IPR036249 Thioredoxin-like superfamily CLSA_c37770 cc5f61ee1dd08c0539a094cf27186130 179 Pfam PF00255 Glutathione peroxidase 2 109 6.1E-39 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CLSA_c34270 6a2d924c98b34ddab0a641f9ff8a8c32 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 169 3.0E-14 T 12-10-2018 CLSA_c34270 6a2d924c98b34ddab0a641f9ff8a8c32 219 Gene3D G3DSA:3.40.50.1000 3 206 1.5E-40 T 12-10-2018 IPR023214 HAD superfamily CLSA_c34270 6a2d924c98b34ddab0a641f9ff8a8c32 219 Gene3D G3DSA:1.10.150.750 16 89 1.5E-40 T 12-10-2018 CLSA_c34270 6a2d924c98b34ddab0a641f9ff8a8c32 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 80 163 1.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CLSA_c34270 6a2d924c98b34ddab0a641f9ff8a8c32 219 SUPERFAMILY SSF56784 2 216 6.13E-37 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c27180 78c4d4f68809d47ab8d6abf5ac720573 181 Gene3D G3DSA:3.40.50.2020 2 181 2.5E-55 T 12-10-2018 CLSA_c27180 78c4d4f68809d47ab8d6abf5ac720573 181 SUPERFAMILY SSF53271 7 170 9.44E-40 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like CLSA_c27180 78c4d4f68809d47ab8d6abf5ac720573 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 177 36.901 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLSA_c27180 78c4d4f68809d47ab8d6abf5ac720573 181 Pfam PF00156 Phosphoribosyl transferase domain 7 162 1.3E-21 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLSA_c32930 66d2f3b251495fa7030e95ee9fa16ee3 320 Pfam PF00892 EamA-like transporter family 148 298 8.4E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c32930 66d2f3b251495fa7030e95ee9fa16ee3 320 Pfam PF00892 EamA-like transporter family 3 137 4.2E-24 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c32930 66d2f3b251495fa7030e95ee9fa16ee3 320 SUPERFAMILY SSF103481 225 303 2.88E-10 T 12-10-2018 CLSA_c32930 66d2f3b251495fa7030e95ee9fa16ee3 320 SUPERFAMILY SSF103481 38 138 9.15E-17 T 12-10-2018 CLSA_c23440 b6e8070aa4ce0e763a579aeae933d362 235 Pfam PF02308 MgtC family 24 148 4.8E-36 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLSA_c23440 b6e8070aa4ce0e763a579aeae933d362 235 PRINTS PR01837 MgtC/SapB protein signature 46 64 5.2E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLSA_c23440 b6e8070aa4ce0e763a579aeae933d362 235 PRINTS PR01837 MgtC/SapB protein signature 104 128 5.2E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLSA_c23440 b6e8070aa4ce0e763a579aeae933d362 235 PRINTS PR01837 MgtC/SapB protein signature 76 98 5.2E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLSA_c23440 b6e8070aa4ce0e763a579aeae933d362 235 PRINTS PR01837 MgtC/SapB protein signature 27 46 5.2E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLSA_c30300 cce0b7e5838ad71a3a6ba5cf1f71cbe0 79 SUPERFAMILY SSF47413 4 64 1.69E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c30300 cce0b7e5838ad71a3a6ba5cf1f71cbe0 79 SMART SM00530 4 61 2.1E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c30300 cce0b7e5838ad71a3a6ba5cf1f71cbe0 79 Gene3D G3DSA:1.10.260.40 3 65 4.1E-10 T 12-10-2018 CLSA_c30300 cce0b7e5838ad71a3a6ba5cf1f71cbe0 79 Pfam PF01381 Helix-turn-helix 5 58 1.5E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c39280 ec2318a8db7be3fe982c261d3e8d22d7 332 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 246 330 4.3E-21 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLSA_c39280 ec2318a8db7be3fe982c261d3e8d22d7 332 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 202 313 3.6E-28 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLSA_c39280 ec2318a8db7be3fe982c261d3e8d22d7 332 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 186 3.7E-34 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLSA_c39280 ec2318a8db7be3fe982c261d3e8d22d7 332 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLSA_c39280 ec2318a8db7be3fe982c261d3e8d22d7 332 SUPERFAMILY SSF117143 92 292 3.92E-30 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLSA_c35090 86ff45b0bf7a30f077e651e6ffa6f534 240 SUPERFAMILY SSF48371 30 233 3.38E-9 T 12-10-2018 IPR016024 Armadillo-type fold CLSA_c25750 c1806880b0579fb278590491f8efaa32 79 Pfam PF04531 Bacteriophage holin 4 70 1.9E-11 T 12-10-2018 IPR006485 Bacteriophage holin CLSA_c15100 8db30a57d9b00a2d920fa20517e93054 216 SUPERFAMILY SSF52317 27 192 4.39E-29 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c15100 8db30a57d9b00a2d920fa20517e93054 216 Pfam PF01965 DJ-1/PfpI family 27 191 7.4E-24 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CLSA_c15100 8db30a57d9b00a2d920fa20517e93054 216 Gene3D G3DSA:3.40.50.880 23 215 1.3E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like CLSA_c40040 4ee6be5dec70f4c15bdab0b22c765d44 267 SUPERFAMILY SSF81345 2 256 2.48E-33 T 12-10-2018 IPR037294 ABC transporter, BtuC-like CLSA_c40040 4ee6be5dec70f4c15bdab0b22c765d44 267 Gene3D G3DSA:1.10.3470.10 34 260 7.1E-7 T 12-10-2018 IPR037294 ABC transporter, BtuC-like CLSA_c40040 4ee6be5dec70f4c15bdab0b22c765d44 267 Pfam PF00950 ABC 3 transport family 5 258 9.6E-69 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CLSA_c27700 e93eec8bf50a74f204c7b9d07b73ec98 205 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 185 1.1E-37 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c27700 e93eec8bf50a74f204c7b9d07b73ec98 205 Gene3D G3DSA:3.40.225.10 1 205 1.9E-54 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c27700 e93eec8bf50a74f204c7b9d07b73ec98 205 SMART SM01007 7 185 8.1E-43 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal CLSA_c27700 e93eec8bf50a74f204c7b9d07b73ec98 205 SUPERFAMILY SSF53639 3 192 6.08E-44 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLSA_c38140 19bc4320a9d8431830cc997e1f04e13c 711 Pfam PF01145 SPFH domain / Band 7 family 288 506 1.0E-19 T 12-10-2018 IPR001107 Band 7 domain CLSA_c38140 19bc4320a9d8431830cc997e1f04e13c 711 PIRSF PIRSF035261 4 675 3.9E-204 T 12-10-2018 IPR017037 Uncharacterised conserved protein UCP035261 CLSA_c18740 1ce102ba0a3c9668b424c607c5ffa6ab 179 Pfam PF10400 Virulence activator alpha C-term 94 175 9.4E-16 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal CLSA_c18740 1ce102ba0a3c9668b424c607c5ffa6ab 179 Gene3D G3DSA:1.10.10.10 2 88 2.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c18740 1ce102ba0a3c9668b424c607c5ffa6ab 179 SUPERFAMILY SSF46785 4 177 1.82E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c18740 1ce102ba0a3c9668b424c607c5ffa6ab 179 Pfam PF03551 Transcriptional regulator PadR-like family 8 80 2.0E-16 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c05520 d2348074242cd9ce2de462f19ee97a13 459 Pfam PF13186 Iron-sulfur cluster-binding domain 332 387 2.3E-6 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain CLSA_c05520 d2348074242cd9ce2de462f19ee97a13 459 SUPERFAMILY SSF102114 110 393 3.53E-53 T 12-10-2018 CLSA_c05520 d2348074242cd9ce2de462f19ee97a13 459 Pfam PF13353 4Fe-4S single cluster domain 121 183 1.2E-5 T 12-10-2018 CLSA_c05520 d2348074242cd9ce2de462f19ee97a13 459 Pfam PF04055 Radical SAM superfamily 117 247 3.2E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CLSA_c05520 d2348074242cd9ce2de462f19ee97a13 459 Gene3D G3DSA:3.20.20.70 109 388 3.9E-40 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c21020 ac5481f3b191c121a8688c6049ad6898 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 279 8.2E-10 T 12-10-2018 IPR000160 GGDEF domain CLSA_c21020 ac5481f3b191c121a8688c6049ad6898 284 Gene3D G3DSA:3.30.70.270 115 283 2.1E-13 T 12-10-2018 CLSA_c21020 ac5481f3b191c121a8688c6049ad6898 284 SUPERFAMILY SSF55073 136 278 8.63E-11 T 12-10-2018 IPR029787 Nucleotide cyclase CLSA_c04270 f8664d8c66bdc7a9f7fb8369d54d8203 274 Pfam PF03741 Integral membrane protein TerC family 39 239 2.7E-50 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CLSA_c04270 f8664d8c66bdc7a9f7fb8369d54d8203 274 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 9 271 8.8E-97 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CLSA_c42800 0a55c430ea9e67de28d339a506949623 88 Gene3D G3DSA:1.20.58.1000 1 86 1.3E-28 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily CLSA_c42800 0a55c430ea9e67de28d339a506949623 88 Pfam PF02583 Metal-sensitive transcriptional repressor 4 84 7.7E-28 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLSA_c29820 640bcd60c6eb4b41a8f3103a750cc977 233 SUPERFAMILY SSF54106 186 233 3.66E-7 T 12-10-2018 CLSA_c29820 640bcd60c6eb4b41a8f3103a750cc977 233 Pfam PF01476 LysM domain 188 233 2.7E-8 T 12-10-2018 IPR018392 LysM domain CLSA_c29820 640bcd60c6eb4b41a8f3103a750cc977 233 SMART SM00257 187 233 0.0084 T 12-10-2018 IPR018392 LysM domain CLSA_c29820 640bcd60c6eb4b41a8f3103a750cc977 233 Gene3D G3DSA:3.10.350.10 181 233 1.6E-12 T 12-10-2018 IPR036779 LysM domain superfamily CLSA_c45330 6328133403296409cb04733dd0ed619a 148 Hamap MF_00984 Single-stranded DNA-binding protein. 1 106 33.0 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLSA_c45330 6328133403296409cb04733dd0ed619a 148 SUPERFAMILY SSF50249 1 148 3.43E-44 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold CLSA_c45330 6328133403296409cb04733dd0ed619a 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 122 4.0E-35 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLSA_c45330 6328133403296409cb04733dd0ed619a 148 Pfam PF00436 Single-strand binding protein family 1 102 2.7E-34 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CLSA_c45330 6328133403296409cb04733dd0ed619a 148 Gene3D G3DSA:2.40.50.140 1 110 3.2E-40 T 12-10-2018 CLSA_c45330 6328133403296409cb04733dd0ed619a 148 PIRSF PIRSF002070 1 145 3.6E-35 T 12-10-2018 CLSA_c23520 f1cd9a17fb2df59485e6701ac4580568 184 PIRSF PIRSF016661 1 179 1.6E-40 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLSA_c23520 f1cd9a17fb2df59485e6701ac4580568 184 Gene3D G3DSA:1.10.1760.20 1 179 1.5E-47 T 12-10-2018 CLSA_c23520 f1cd9a17fb2df59485e6701ac4580568 184 Pfam PF02632 BioY family 32 171 3.2E-33 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLSA_c19460 47f70577466e14d1b9f96e8c76bcd295 506 Gene3D G3DSA:3.40.50.300 12 173 1.9E-8 T 12-10-2018 CLSA_c19460 47f70577466e14d1b9f96e8c76bcd295 506 SUPERFAMILY SSF52540 14 274 1.38E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c19460 47f70577466e14d1b9f96e8c76bcd295 506 Pfam PF13366 PD-(D/E)XK nuclease superfamily 421 487 3.5E-5 T 12-10-2018 IPR026350 GxxExxY protein CLSA_c15650 33001e13d39e02b5a5002b0d3786c6d5 210 Gene3D G3DSA:2.10.270.10 27 208 2.4E-13 T 12-10-2018 CLSA_c15650 33001e13d39e02b5a5002b0d3786c6d5 210 SUPERFAMILY SSF69360 70 208 1.44E-10 T 12-10-2018 CLSA_c15910 faf901722416e3e6c3098317bf090f2a 308 Gene3D G3DSA:3.40.50.2300 36 288 9.3E-86 T 12-10-2018 CLSA_c15910 faf901722416e3e6c3098317bf090f2a 308 Pfam PF13407 Periplasmic binding protein domain 34 287 4.1E-58 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c15910 faf901722416e3e6c3098317bf090f2a 308 Gene3D G3DSA:3.40.50.2300 132 269 9.3E-86 T 12-10-2018 CLSA_c15910 faf901722416e3e6c3098317bf090f2a 308 SUPERFAMILY SSF53822 17 306 4.3E-81 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c34730 611594601d553f62c5fbc5cbad612bae 348 SUPERFAMILY SSF53822 39 342 1.45E-67 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c34730 611594601d553f62c5fbc5cbad612bae 348 Gene3D G3DSA:3.40.50.2300 43 324 3.0E-100 T 12-10-2018 CLSA_c34730 611594601d553f62c5fbc5cbad612bae 348 Gene3D G3DSA:3.40.50.2300 152 302 3.0E-100 T 12-10-2018 CLSA_c34730 611594601d553f62c5fbc5cbad612bae 348 Pfam PF13407 Periplasmic binding protein domain 43 319 7.8E-52 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c21880 9f3ce93b6995ad63e15c39ac617eb54a 351 Gene3D G3DSA:3.40.50.2300 43 327 5.5E-82 T 12-10-2018 CLSA_c21880 9f3ce93b6995ad63e15c39ac617eb54a 351 Gene3D G3DSA:3.40.50.2300 154 305 5.5E-82 T 12-10-2018 CLSA_c21880 9f3ce93b6995ad63e15c39ac617eb54a 351 Pfam PF13407 Periplasmic binding protein domain 43 324 7.2E-44 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c21880 9f3ce93b6995ad63e15c39ac617eb54a 351 SUPERFAMILY SSF53822 40 347 4.32E-55 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c30610 29435f1bf6189fffd7d61c3498ebbb75 159 Gene3D G3DSA:3.30.1490.410 30 156 3.6E-40 T 12-10-2018 CLSA_c30610 29435f1bf6189fffd7d61c3498ebbb75 159 Pfam PF16224 DOmain of unknown function (DUF4883) 33 149 2.7E-46 T 12-10-2018 IPR032619 Protein of unknown function DUF4883 CLSA_c32550 45c0d919194092a6782689b22fd38fd6 84 Pfam PF16079 Phage holin family Hol44, in holin superfamily V 14 78 5.3E-21 T 12-10-2018 IPR032111 Clostridium phage holin CLSA_c08450 0fbe8a6e35d2520ac0d6dc5c0899f758 405 Pfam PF17118 Domain of unknown function (DUF5105) 256 387 6.5E-9 T 12-10-2018 IPR031343 Domain of unknown function DUF5105 CLSA_c08450 0fbe8a6e35d2520ac0d6dc5c0899f758 405 Pfam PF17118 Domain of unknown function (DUF5105) 41 194 1.3E-10 T 12-10-2018 IPR031343 Domain of unknown function DUF5105 CLSA_c25260 fe6ae60ef7ea767afd104bb792926f35 53 SUPERFAMILY SSF51569 1 44 3.35E-11 T 12-10-2018 CLSA_c25260 fe6ae60ef7ea767afd104bb792926f35 53 Gene3D G3DSA:3.20.20.70 1 51 4.1E-14 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c10050 def1b17da7ccbf982498a34b1526d286 377 Pfam PF14424 The BURPS668_1122 family of deaminases 245 373 2.8E-43 T 12-10-2018 IPR032721 Deaminases, BURPS668_1122 family CLSA_c26180 64762c9568d3ab65b739649a3e01ee8d 92 Pfam PF10719 Late competence development protein ComFB 5 85 1.8E-25 T 12-10-2018 IPR019657 Late competence development protein ComFB CLSA_c22980 619296acda2f3eb5b2e1599c99f5fac3 148 Pfam PF04865 Baseplate J-like protein 64 143 5.7E-9 T 12-10-2018 IPR006949 Baseplate protein J-like CLSA_c12360 b90a8e213fea827c3c75e4f3ab2021bb 214 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 191 1.5E-53 T 12-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLSA_c12360 b90a8e213fea827c3c75e4f3ab2021bb 214 SUPERFAMILY SSF101262 4 212 4.84E-45 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLSA_c12360 b90a8e213fea827c3c75e4f3ab2021bb 214 Gene3D G3DSA:1.20.120.680 7 212 1.5E-60 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLSA_c07460 1e85f8f67612323c1d71e349feefa672 351 SUPERFAMILY SSF74650 7 349 6.28E-118 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CLSA_c07460 1e85f8f67612323c1d71e349feefa672 351 Gene3D G3DSA:2.70.98.10 10 350 2.2E-131 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CLSA_c07460 1e85f8f67612323c1d71e349feefa672 351 PIRSF PIRSF005096 1 351 1.1E-133 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CLSA_c07460 1e85f8f67612323c1d71e349feefa672 351 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CLSA_c07460 1e85f8f67612323c1d71e349feefa672 351 Pfam PF01263 Aldose 1-epimerase 19 347 7.2E-93 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CLSA_c19340 bd6ea051eda1b56bd759f3688e6e12cd 71 Gene3D G3DSA:1.10.150.20 1 70 5.5E-22 T 12-10-2018 CLSA_c19340 bd6ea051eda1b56bd759f3688e6e12cd 71 Pfam PF04994 TfoX C-terminal domain 3 65 8.7E-18 T 12-10-2018 IPR007077 TfoX, C-terminal CLSA_c02180 f989ad35e9218e27c28003cb7efae32c 119 SUPERFAMILY SSF53137 7 117 3.49E-53 T 12-10-2018 CLSA_c02180 f989ad35e9218e27c28003cb7efae32c 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 119 7.6E-49 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c02180 f989ad35e9218e27c28003cb7efae32c 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 119 29.45 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c02180 f989ad35e9218e27c28003cb7efae32c 119 Gene3D G3DSA:3.30.420.100 5 119 4.0E-44 T 12-10-2018 CLSA_c02180 f989ad35e9218e27c28003cb7efae32c 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 4.3E-45 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLSA_c22280 816d7a243251d0ac3969ebf3f23ed28c 220 Gene3D G3DSA:2.160.20.100 8 220 3.0E-53 T 12-10-2018 CLSA_c22280 816d7a243251d0ac3969ebf3f23ed28c 220 SUPERFAMILY SSF141571 43 219 1.31E-47 T 12-10-2018 CLSA_c22280 816d7a243251d0ac3969ebf3f23ed28c 220 Pfam PF00805 Pentapeptide repeats (8 copies) 142 180 9.9E-5 T 12-10-2018 IPR001646 Pentapeptide repeat CLSA_c22280 816d7a243251d0ac3969ebf3f23ed28c 220 Pfam PF13599 Pentapeptide repeats (9 copies) 57 125 5.3E-14 T 12-10-2018 IPR001646 Pentapeptide repeat CLSA_c09220 6e91a67a97fde5af674be9027027abd4 383 Gene3D G3DSA:3.40.50.300 14 198 1.3E-12 T 12-10-2018 CLSA_c09220 6e91a67a97fde5af674be9027027abd4 383 SUPERFAMILY SSF52540 19 240 3.12E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c09220 6e91a67a97fde5af674be9027027abd4 383 Pfam PF09820 Predicted AAA-ATPase 12 274 2.0E-38 T 12-10-2018 IPR018631 AAA-ATPase-like domain CLSA_c39070 177f756b1e6e03501a143dfc25295f45 143 SUPERFAMILY SSF52402 4 137 4.52E-24 T 12-10-2018 CLSA_c39070 177f756b1e6e03501a143dfc25295f45 143 Pfam PF00582 Universal stress protein family 4 135 2.7E-16 T 12-10-2018 IPR006016 UspA CLSA_c39070 177f756b1e6e03501a143dfc25295f45 143 Gene3D G3DSA:3.40.50.620 2 140 1.1E-25 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c39070 177f756b1e6e03501a143dfc25295f45 143 PRINTS PR01438 Universal stress protein signature 96 108 1.7E-11 T 12-10-2018 IPR006015 Universal stress protein A CLSA_c39070 177f756b1e6e03501a143dfc25295f45 143 PRINTS PR01438 Universal stress protein signature 113 135 1.7E-11 T 12-10-2018 IPR006015 Universal stress protein A CLSA_c39070 177f756b1e6e03501a143dfc25295f45 143 PRINTS PR01438 Universal stress protein signature 3 21 1.7E-11 T 12-10-2018 IPR006015 Universal stress protein A CLSA_c11840 2419df185b277bfee4f30e382192f553 485 Pfam PF05598 Transposase domain (DUF772) 54 123 1.5E-10 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c37630 5d75f5aa33a085695895f558984c6edd 226 Gene3D G3DSA:3.60.15.10 11 226 9.6E-58 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c37630 5d75f5aa33a085695895f558984c6edd 226 SMART SM00849 18 182 1.3E-35 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c37630 5d75f5aa33a085695895f558984c6edd 226 SUPERFAMILY SSF56281 18 199 2.1E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c37630 5d75f5aa33a085695895f558984c6edd 226 Pfam PF00753 Metallo-beta-lactamase superfamily 20 168 3.5E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c35130 dc60fe92c826133d71825b0cc9cb69e9 57 Pfam PF15586 Immunity protein 8 4 56 3.6E-11 T 12-10-2018 IPR028964 Immunity protein 8 CLSA_c37810 f811f5fbebbdb1f98dda148068d1b2e9 59 Gene3D G3DSA:1.10.10.1100 6 59 9.2E-18 T 12-10-2018 CLSA_c37810 f811f5fbebbdb1f98dda148068d1b2e9 59 Pfam PF04324 BFD-like [2Fe-2S] binding domain 6 53 6.6E-17 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CLSA_c16350 d5989a15511ba29c6a6633c052e7ef3e 216 Pfam PF09335 SNARE associated Golgi protein 60 176 2.0E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein CLSA_c27970 723c550fab60bb4520485fa99498e0cf 149 Pfam PF12821 Threonine/Serine exporter, ThrE 4 132 1.6E-37 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE CLSA_c38240 137407f7d2d06a055183fbfb04125649 455 Gene3D G3DSA:3.20.20.70 140 451 1.8E-147 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c38240 137407f7d2d06a055183fbfb04125649 455 PIRSF PIRSF018788 1 455 4.8E-231 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLSA_c38240 137407f7d2d06a055183fbfb04125649 455 Gene3D G3DSA:1.10.220.70 55 139 2.6E-34 T 12-10-2018 CLSA_c38240 137407f7d2d06a055183fbfb04125649 455 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 441 8.2E-211 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLSA_c38240 137407f7d2d06a055183fbfb04125649 455 Gene3D G3DSA:2.30.170.30 1 53 3.7E-26 T 12-10-2018 CLSA_c28030 b34b41a889e367a25b51f8e7fdbd03b6 588 Pfam PF00350 Dynamin family 49 205 3.1E-23 T 12-10-2018 IPR022812 Dynamin superfamily CLSA_c28030 b34b41a889e367a25b51f8e7fdbd03b6 588 SUPERFAMILY SSF52540 20 213 8.33E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c28030 b34b41a889e367a25b51f8e7fdbd03b6 588 Gene3D G3DSA:3.40.50.300 47 291 1.8E-23 T 12-10-2018 CLSA_c39290 5c3b225648e54b3b3f01bf9c0e677464 130 Pfam PF12611 Putative flagellar 106 129 1.8E-10 T 12-10-2018 IPR013367 Flagellar, putative CLSA_c39290 5c3b225648e54b3b3f01bf9c0e677464 130 TIGRFAM TIGR02530 flg_new: flagellar operon protein 36 130 7.8E-26 T 12-10-2018 IPR013367 Flagellar, putative CLSA_c23420 71fe348d289f1474bb6a72c743e15d9c 181 Gene3D G3DSA:2.30.110.10 2 181 1.3E-33 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c23420 71fe348d289f1474bb6a72c743e15d9c 181 SUPERFAMILY SSF50475 7 170 2.89E-30 T 12-10-2018 CLSA_c23420 71fe348d289f1474bb6a72c743e15d9c 181 Pfam PF01613 Flavin reductase like domain 16 125 3.1E-9 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CLSA_c22470 5481406ad6dda91d8acc331ad21bb4d5 428 Gene3D G3DSA:3.90.1150.60 30 420 1.2E-167 T 12-10-2018 CLSA_c22470 5481406ad6dda91d8acc331ad21bb4d5 428 Gene3D G3DSA:3.40.640.10 66 282 1.2E-167 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CLSA_c22470 5481406ad6dda91d8acc331ad21bb4d5 428 SUPERFAMILY SSF53383 48 378 6.12E-39 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CLSA_c22470 5481406ad6dda91d8acc331ad21bb4d5 428 Pfam PF06838 Methionine gamma-lyase 21 425 1.6E-180 T 12-10-2018 IPR009651 Putative methionine gamma-lyase CLSA_c11920 f942b4651920f128d1ab05646cbe2987 764 Pfam PF12698 ABC-2 family transporter protein 25 179 1.2E-8 T 12-10-2018 CLSA_c11920 f942b4651920f128d1ab05646cbe2987 764 Pfam PF12698 ABC-2 family transporter protein 353 739 2.8E-12 T 12-10-2018 CLSA_c11920 f942b4651920f128d1ab05646cbe2987 764 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 172 3.5E-48 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal CLSA_c11920 f942b4651920f128d1ab05646cbe2987 764 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 541 744 8.8E-42 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal CLSA_c39560 c7b2c7f1fe4f0f7276054d93b94da703 378 SUPERFAMILY SSF52402 37 186 2.65E-16 T 12-10-2018 CLSA_c39560 c7b2c7f1fe4f0f7276054d93b94da703 378 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 1 348 8.6E-103 T 12-10-2018 IPR020022 N-acetyl sugar amidotransferase CLSA_c39560 c7b2c7f1fe4f0f7276054d93b94da703 378 Gene3D G3DSA:3.40.50.620 3 171 9.6E-6 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 1.9E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 SUPERFAMILY SSF48498 76 186 2.5E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 Gene3D G3DSA:1.10.357.10 51 187 4.1E-17 T 12-10-2018 CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 Gene3D G3DSA:1.10.10.60 3 50 7.3E-18 T 12-10-2018 CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLSA_c00330 4adbf212a3764c5d3daf012e621b875a 190 SUPERFAMILY SSF46689 4 72 5.49E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c41760 efaf99d8bba591529d110a98fe2a8bad 89 Pfam PF11823 Protein of unknown function (DUF3343) 7 73 7.2E-16 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 CLSA_c41990 2cf8c243b20eee51ac84930f0d7b1a1c 321 SUPERFAMILY SSF53448 4 254 4.5E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41990 2cf8c243b20eee51ac84930f0d7b1a1c 321 Gene3D G3DSA:3.90.550.10 2 218 3.7E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41990 2cf8c243b20eee51ac84930f0d7b1a1c 321 Pfam PF00535 Glycosyl transferase family 2 7 174 2.5E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c33460 ff5cca969f9d885dd1c7bcd330e334ee 311 Pfam PF13536 Putative multidrug resistance efflux transporter 39 305 1.1E-108 T 12-10-2018 IPR032713 Putative multidrug resistance efflux transporter CLSA_c18160 d549c7156c2e09964c479101a91ae68a 82 SUPERFAMILY SSF55021 4 81 1.19E-16 T 12-10-2018 CLSA_c18160 d549c7156c2e09964c479101a91ae68a 82 Gene3D G3DSA:3.30.70.1150 2 82 1.3E-8 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CLSA_c34220 b90ba497644c62b49570682c6e24a141 316 SUPERFAMILY SSF69360 31 86 2.35E-11 T 12-10-2018 CLSA_c34220 b90ba497644c62b49570682c6e24a141 316 Pfam PF01473 Putative cell wall binding repeat 49 66 1.0E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c34220 b90ba497644c62b49570682c6e24a141 316 Gene3D G3DSA:2.10.270.10 25 85 3.6E-10 T 12-10-2018 CLSA_c27940 59b46b6ca720304133624af366f13aaf 308 Pfam PF00149 Calcineurin-like phosphoesterase 29 239 1.8E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CLSA_c27940 59b46b6ca720304133624af366f13aaf 308 SUPERFAMILY SSF56300 29 284 2.92E-18 T 12-10-2018 CLSA_c44980 02fbbaa37cd50df85913ab534aab72c1 191 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 8 72 4.8E-7 T 12-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 CLSA_c31540 cbabe2396ff2f30b0add3a61fecf3bcd 324 SUPERFAMILY SSF53474 58 299 4.13E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c31540 cbabe2396ff2f30b0add3a61fecf3bcd 324 Pfam PF07859 alpha/beta hydrolase fold 92 297 1.0E-9 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CLSA_c31540 cbabe2396ff2f30b0add3a61fecf3bcd 324 Gene3D G3DSA:3.40.50.1820 53 310 1.0E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c35740 76e5ab2b693733bcec07afd25d28e4ce 218 Pfam PF06114 IrrE N-terminal-like domain 66 168 1.6E-9 T 12-10-2018 IPR010359 IrrE N-terminal-like domain CLSA_c35740 76e5ab2b693733bcec07afd25d28e4ce 218 SUPERFAMILY SSF55486 9 141 5.57E-8 T 12-10-2018 CLSA_c32500 aea74314ad2bcb24576095401cfe6a54 207 SUPERFAMILY SSF63965 9 206 6.15E-71 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 CLSA_c32500 aea74314ad2bcb24576095401cfe6a54 207 Gene3D G3DSA:3.40.50.10230 2 207 5.3E-84 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 CLSA_c32500 aea74314ad2bcb24576095401cfe6a54 207 Pfam PF02570 Precorrin-8X methylmutase 10 203 1.0E-77 T 12-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 CLSA_c32040 2c21ab365337f83743ad3e8b14771983 213 SUPERFAMILY SSF100950 18 154 6.91E-7 T 12-10-2018 IPR037171 NagB/RpiA transferase-like CLSA_c32040 2c21ab365337f83743ad3e8b14771983 213 Pfam PF02589 LUD domain 16 207 1.3E-47 T 12-10-2018 IPR003741 LUD domain CLSA_c41620 42312402b1e2fbcd2656e60c61b96ea8 158 SUPERFAMILY SSF51261 3 153 4.01E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c41620 42312402b1e2fbcd2656e60c61b96ea8 158 Gene3D G3DSA:2.70.70.10 4 157 1.4E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif CLSA_c41620 42312402b1e2fbcd2656e60c61b96ea8 158 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 11 131 1.9E-41 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c41620 42312402b1e2fbcd2656e60c61b96ea8 158 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 10 134 4.3E-48 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c41620 42312402b1e2fbcd2656e60c61b96ea8 158 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 73 85 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CLSA_c27730 201cc525041403c64b279524e75a3017 320 SUPERFAMILY SSF51658 51 311 2.02E-12 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily CLSA_c27730 201cc525041403c64b279524e75a3017 320 Pfam PF03851 UV-endonuclease UvdE 5 274 6.6E-75 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 CLSA_c27730 201cc525041403c64b279524e75a3017 320 Gene3D G3DSA:3.20.20.150 2 309 1.2E-99 T 12-10-2018 CLSA_c27730 201cc525041403c64b279524e75a3017 320 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 303 1.6E-68 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 CLSA_c09080 c1f0398a575eb15c874d757de87c4b61 65 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 9 64 7.8E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLSA_c09080 c1f0398a575eb15c874d757de87c4b61 65 Gene3D G3DSA:1.10.260.40 12 64 2.6E-6 T 12-10-2018 CLSA_c09080 c1f0398a575eb15c874d757de87c4b61 65 SUPERFAMILY SSF47413 12 63 1.22E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 Gene3D G3DSA:3.90.930.1 8 159 3.6E-7 T 12-10-2018 CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 Gene3D G3DSA:3.90.930.1 356 506 6.3E-6 T 12-10-2018 CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 Gene3D G3DSA:3.90.930.1 160 289 1.7E-10 T 12-10-2018 CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 Gene3D G3DSA:2.180.10.10 526 784 3.1E-29 T 12-10-2018 CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 Pfam PF05593 RHS Repeat 189 225 1.6E-8 T 12-10-2018 IPR031325 RHS repeat CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 710 784 2.1E-24 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 48 81 1.9E-4 T 12-10-2018 IPR006530 YD repeat CLSA_c35190 30ade5604de9d7ad830beb1c3568886a 943 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 189 225 2.4E-7 T 12-10-2018 IPR006530 YD repeat CLSA_c03100 9bc5984ca7fff40b55b3b25e012013a6 651 SUPERFAMILY SSF56801 233 649 8.77E-73 T 12-10-2018 CLSA_c03100 9bc5984ca7fff40b55b3b25e012013a6 651 Gene3D G3DSA:3.90.550.10 1 246 3.5E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c03100 9bc5984ca7fff40b55b3b25e012013a6 651 SUPERFAMILY SSF53448 1 238 1.31E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c03100 9bc5984ca7fff40b55b3b25e012013a6 651 Pfam PF00483 Nucleotidyl transferase 3 179 1.2E-15 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLSA_c03100 9bc5984ca7fff40b55b3b25e012013a6 651 Gene3D G3DSA:3.40.50.12780 248 643 6.2E-85 T 12-10-2018 CLSA_c03100 9bc5984ca7fff40b55b3b25e012013a6 651 Pfam PF00501 AMP-binding enzyme 254 649 2.6E-65 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CLSA_c33550 365da62d4fb2e6c97ff194fc2be14137 214 Pfam PF02096 60Kd inner membrane protein 23 202 2.5E-31 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CLSA_c33550 365da62d4fb2e6c97ff194fc2be14137 214 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 22 201 1.3E-31 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLSA_c37790 e70d59ac0a9701001364bf1237d6a2cf 463 PIRSF PIRSF006060 5 463 1.2E-94 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c37790 e70d59ac0a9701001364bf1237d6a2cf 463 Gene3D G3DSA:1.20.1740.10 20 462 1.4E-124 T 12-10-2018 CLSA_c37790 e70d59ac0a9701001364bf1237d6a2cf 463 Pfam PF13520 Amino acid permease 30 424 3.1E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c11210 6e74e32812ae6bf11aa549b667ca3a3b 462 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 9 459 4.8E-131 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLSA_c11210 6e74e32812ae6bf11aa549b667ca3a3b 462 PIRSF PIRSF005690 1 462 7.7E-111 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLSA_c14720 e2ce92316a6f35f419311bbffc02c43e 179 Gene3D G3DSA:3.40.109.10 1 179 3.4E-61 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c14720 e2ce92316a6f35f419311bbffc02c43e 179 SUPERFAMILY SSF55469 2 179 8.25E-56 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c14720 e2ce92316a6f35f419311bbffc02c43e 179 Pfam PF00881 Nitroreductase family 5 157 5.9E-32 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c23890 0544adb8ae92ec106b91eebd6cbaf502 319 Pfam PF12725 Protein of unknown function (DUF3810) 2 311 6.2E-89 T 12-10-2018 IPR024294 Protein of unknown function DUF3810 CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 SUPERFAMILY SSF51430 1 298 9.04E-84 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 Pfam PF00248 Aldo/keto reductase family 15 297 1.3E-65 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 PRINTS PR00069 Aldo-keto reductase signature 38 62 2.6E-9 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 PRINTS PR00069 Aldo-keto reductase signature 186 215 2.6E-9 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 PRINTS PR00069 Aldo-keto reductase signature 234 258 2.6E-9 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 PRINTS PR00069 Aldo-keto reductase signature 102 120 2.6E-9 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLSA_c10290 e288f7e48b852159c09324cf53b319cd 306 Gene3D G3DSA:3.20.20.100 1 306 2.1E-98 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CLSA_c39570 b9fde462531d1bb0b916004f0e515854 263 SUPERFAMILY SSF51366 1 262 1.18E-63 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CLSA_c39570 b9fde462531d1bb0b916004f0e515854 263 Pfam PF00977 Histidine biosynthesis protein 5 246 1.7E-59 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CLSA_c39570 b9fde462531d1bb0b916004f0e515854 263 Gene3D G3DSA:3.20.20.70 1 263 2.0E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c43680 97d4afaed3da6bf64e47aeb367fd7f3a 269 Pfam PF03618 Kinase/pyrophosphorylase 4 260 1.2E-87 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CLSA_c43680 97d4afaed3da6bf64e47aeb367fd7f3a 269 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 2 265 53.998 T 12-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CLSA_c38680 0634131f2d79f6c1f8e23b9dc1109e8e 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 294 3.0E-35 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c21280 c520ae44fd260ebd11fb3b4d36a119c8 245 Pfam PF05857 TraX protein 3 241 3.0E-43 T 12-10-2018 IPR008875 TraX CLSA_c32780 cbb0d9cb0a4261f5e16106395fdddf58 300 Pfam PF02361 Cobalt transport protein 57 266 7.7E-33 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CLSA_c32780 cbb0d9cb0a4261f5e16106395fdddf58 300 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 63 262 8.8E-41 T 12-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 CLSA_c10100 a72d6d7c867abbc2522f3ef54e0e065c 289 Gene3D G3DSA:3.40.50.300 9 244 1.8E-67 T 12-10-2018 CLSA_c10100 a72d6d7c867abbc2522f3ef54e0e065c 289 Pfam PF00005 ABC transporter 28 168 2.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c10100 a72d6d7c867abbc2522f3ef54e0e065c 289 SMART SM00382 37 215 2.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c10100 a72d6d7c867abbc2522f3ef54e0e065c 289 SUPERFAMILY SSF52540 15 226 7.54E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c10100 a72d6d7c867abbc2522f3ef54e0e065c 289 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c30730 01c324f851708d2bb77c46e07a40e6b1 227 Gene3D G3DSA:3.40.109.40 1 204 7.4E-66 T 12-10-2018 CLSA_c30730 01c324f851708d2bb77c46e07a40e6b1 227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 86 193 1.3E-5 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30730 01c324f851708d2bb77c46e07a40e6b1 227 SUPERFAMILY SSF56507 12 194 8.63E-36 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLSA_c30730 01c324f851708d2bb77c46e07a40e6b1 227 PIRSF PIRSF037984 1 223 7.1E-78 T 12-10-2018 IPR017342 S-adenosyl-L-methionine dependent methionine synthase, predicted CLSA_c26410 fb9b964b94f5acb32f233f57578376d6 171 Pfam PF13787 Protein of unknown function with HXXEE motif 9 127 9.2E-24 T 12-10-2018 IPR025671 Protein of unknown function with HXXEE motif CLSA_c16990 3ee6d10c983b1fabf49f334d8eb068c9 241 Pfam PF02361 Cobalt transport protein 24 204 6.8E-19 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component CLSA_c39310 d0c44cba463adc3841924a62f13f73f9 449 Pfam PF02120 Flagellar hook-length control protein FliK 319 397 3.2E-17 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CLSA_c39310 d0c44cba463adc3841924a62f13f73f9 449 Gene3D G3DSA:3.30.750.140 299 421 1.3E-13 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily CLSA_c08420 99889e6b3338a547aa5ab4d1aedbd82b 324 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 252 304 9.5E-14 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 CLSA_c08420 99889e6b3338a547aa5ab4d1aedbd82b 324 Gene3D G3DSA:2.180.10.10 9 310 3.2E-16 T 12-10-2018 CLSA_c23790 a55ad8fcbe0f61381ead7b2a949e1462 240 SUPERFAMILY SSF54001 43 209 2.16E-5 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c06580 49832cdae7ddc91f7936f11b90ad4781 192 Gene3D G3DSA:2.60.60.30 19 187 1.6E-67 T 12-10-2018 CLSA_c06580 49832cdae7ddc91f7936f11b90ad4781 192 Pfam PF02342 TerD domain 1 188 5.3E-80 T 12-10-2018 IPR003325 TerD domain CLSA_c40990 98d331ac590888738467a3f1d83a6eb1 360 SUPERFAMILY SSF52540 6 167 4.28E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c40990 98d331ac590888738467a3f1d83a6eb1 360 Pfam PF07728 AAA domain (dynein-related subfamily) 21 148 4.7E-9 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CLSA_c40990 98d331ac590888738467a3f1d83a6eb1 360 Gene3D G3DSA:3.40.50.300 4 172 7.7E-18 T 12-10-2018 CLSA_c40990 98d331ac590888738467a3f1d83a6eb1 360 SMART SM00382 16 168 1.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c44490 8a45d43daebb5329e366a7798b56f781 185 Pfam PF13346 ABC-2 family transporter protein 3 178 6.0E-6 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like CLSA_c04830 1bf4d96d4b054eb47ec581af7aa8d2f1 332 Pfam PF01633 Choline/ethanolamine kinase 85 242 1.1E-12 T 12-10-2018 CLSA_c04830 1bf4d96d4b054eb47ec581af7aa8d2f1 332 Gene3D G3DSA:3.90.1200.10 91 331 6.4E-72 T 12-10-2018 CLSA_c04830 1bf4d96d4b054eb47ec581af7aa8d2f1 332 SUPERFAMILY SSF56112 9 328 1.1E-54 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c04830 1bf4d96d4b054eb47ec581af7aa8d2f1 332 Gene3D G3DSA:3.30.200.20 2 90 9.8E-21 T 12-10-2018 CLSA_c04830 1bf4d96d4b054eb47ec581af7aa8d2f1 332 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 13 326 4.9E-118 T 12-10-2018 IPR014255 Spore coat protein CotS CLSA_c13100 44ae7a15af35ac61ab5a58eb3424ccd5 313 Pfam PF03060 Nitronate monooxygenase 5 299 1.9E-74 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLSA_c13100 44ae7a15af35ac61ab5a58eb3424ccd5 313 SUPERFAMILY SSF51412 4 305 2.14E-75 T 12-10-2018 CLSA_c13100 44ae7a15af35ac61ab5a58eb3424ccd5 313 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 3 304 2.4E-152 T 12-10-2018 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative CLSA_c13100 44ae7a15af35ac61ab5a58eb3424ccd5 313 Gene3D G3DSA:3.20.20.70 2 308 1.0E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c40130 b6c8aeee5ee8f74add8507c49bc86cd6 192 Gene3D G3DSA:2.60.40.10 86 184 1.7E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold CLSA_c40470 7c44f5e18ce231d70b32f9d70116776e 153 PIRSF PIRSF029256 2 153 2.2E-62 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CLSA_c40470 7c44f5e18ce231d70b32f9d70116776e 153 SUPERFAMILY SSF75217 3 152 1.77E-39 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases CLSA_c40470 7c44f5e18ce231d70b32f9d70116776e 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 150 35.268 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CLSA_c40470 7c44f5e18ce231d70b32f9d70116776e 153 Pfam PF00588 SpoU rRNA Methylase family 3 141 1.6E-33 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLSA_c40470 7c44f5e18ce231d70b32f9d70116776e 153 Gene3D G3DSA:3.40.1280.10 2 153 3.4E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLSA_c31850 fb5853c563cdfa99648d156b2978169d 213 Gene3D G3DSA:3.40.1180.10 1 213 2.8E-42 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CLSA_c31850 fb5853c563cdfa99648d156b2978169d 213 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 209 1.2E-35 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLSA_c31850 fb5853c563cdfa99648d156b2978169d 213 SUPERFAMILY SSF64005 2 206 1.96E-43 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CLSA_c23490 cd375b6934bf440151e40dc907f74a9c 194 Gene3D G3DSA:3.40.630.30 7 192 5.1E-45 T 12-10-2018 CLSA_c23490 cd375b6934bf440151e40dc907f74a9c 194 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 4.7E-32 T 12-10-2018 IPR000182 GNAT domain CLSA_c23490 cd375b6934bf440151e40dc907f74a9c 194 SUPERFAMILY SSF55729 9 181 1.96E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c05970 4e3ac1a30ba7980b815a72bc16cadaf6 599 PIRSF PIRSF037677 346 598 3.8E-29 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CLSA_c05970 4e3ac1a30ba7980b815a72bc16cadaf6 599 PIRSF PIRSF037677 111 209 2.9 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CLSA_c05970 4e3ac1a30ba7980b815a72bc16cadaf6 599 Pfam PF00488 MutS domain V 426 596 2.4E-28 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c05970 4e3ac1a30ba7980b815a72bc16cadaf6 599 SUPERFAMILY SSF52540 386 597 1.66E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c05970 4e3ac1a30ba7980b815a72bc16cadaf6 599 SMART SM00534 422 597 5.6E-12 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLSA_c05970 4e3ac1a30ba7980b815a72bc16cadaf6 599 Gene3D G3DSA:3.40.50.300 387 598 2.3E-50 T 12-10-2018 CLSA_c05840 715d99fa4ff4aecbb60a6466a4093999 144 Gene3D G3DSA:3.30.460.10 19 107 7.3E-17 T 12-10-2018 CLSA_c05840 715d99fa4ff4aecbb60a6466a4093999 144 Pfam PF01909 Nucleotidyltransferase domain 30 105 5.3E-11 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLSA_c05840 715d99fa4ff4aecbb60a6466a4093999 144 SUPERFAMILY SSF81301 33 107 1.12E-14 T 12-10-2018 CLSA_c16690 80b5244e4a6090422b4d113468e46f5d 346 Gene3D G3DSA:3.40.50.2300 149 299 1.7E-67 T 12-10-2018 CLSA_c16690 80b5244e4a6090422b4d113468e46f5d 346 SUPERFAMILY SSF53822 36 338 2.19E-53 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c16690 80b5244e4a6090422b4d113468e46f5d 346 Pfam PF13407 Periplasmic binding protein domain 40 318 4.0E-34 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c16690 80b5244e4a6090422b4d113468e46f5d 346 Gene3D G3DSA:3.40.50.2300 40 321 1.7E-67 T 12-10-2018 CLSA_c16490 4eb5609a5636818f387a0f8beb0740e0 276 Gene3D G3DSA:3.40.190.10 41 264 1.3E-45 T 12-10-2018 CLSA_c16490 4eb5609a5636818f387a0f8beb0740e0 276 SUPERFAMILY SSF53850 1 264 7.1E-46 T 12-10-2018 CLSA_c16490 4eb5609a5636818f387a0f8beb0740e0 276 SMART SM00062 46 272 1.5E-35 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c16490 4eb5609a5636818f387a0f8beb0740e0 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 264 2.0E-48 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c16490 4eb5609a5636818f387a0f8beb0740e0 276 Gene3D G3DSA:3.40.190.10 135 228 1.3E-45 T 12-10-2018 CLSA_c04860 90e472c3fe2d4c01c384ab941d3bfa2a 80 Gene3D G3DSA:2.30.30.100 1 77 9.5E-23 T 12-10-2018 CLSA_c04860 90e472c3fe2d4c01c384ab941d3bfa2a 80 PIRSF PIRSF037257 1 79 3.6E-30 T 12-10-2018 IPR009366 Protein Veg GO:0006355 CLSA_c04860 90e472c3fe2d4c01c384ab941d3bfa2a 80 Pfam PF06257 Biofilm formation stimulator VEG 6 74 7.8E-28 T 12-10-2018 IPR009366 Protein Veg GO:0006355 CLSA_c22020 8df406b7842106eaca1cc35de4395b64 290 Gene3D G3DSA:3.40.190.10 141 231 2.8E-78 T 12-10-2018 CLSA_c22020 8df406b7842106eaca1cc35de4395b64 290 SUPERFAMILY SSF53850 7 267 2.13E-61 T 12-10-2018 CLSA_c22020 8df406b7842106eaca1cc35de4395b64 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 259 3.9E-50 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c22020 8df406b7842106eaca1cc35de4395b64 290 Gene3D G3DSA:3.40.190.10 44 266 2.8E-78 T 12-10-2018 CLSA_c22020 8df406b7842106eaca1cc35de4395b64 290 SMART SM00062 51 273 3.7E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c38190 f973df962e0f179f3687b7a80cbae597 322 SUPERFAMILY SSF53448 6 258 4.02E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c38190 f973df962e0f179f3687b7a80cbae597 322 Gene3D G3DSA:3.90.550.10 2 200 2.4E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c38190 f973df962e0f179f3687b7a80cbae597 322 Pfam PF00535 Glycosyl transferase family 2 8 169 2.2E-35 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 SUPERFAMILY SSF50621 273 430 5.65E-53 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 297 387 1.8E-18 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 SUPERFAMILY SSF51419 29 298 3.63E-78 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 18 430 39.691 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 430 2.7E-148 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 Gene3D G3DSA:3.20.20.10 37 296 8.0E-154 T 12-10-2018 IPR029066 PLP-binding barrel CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 Gene3D G3DSA:2.40.37.10 16 426 8.0E-154 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 197 210 1.2E-15 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 82 94 1.2E-15 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 387 400 1.2E-15 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 286 305 1.2E-15 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 80 97 5.0E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 315 333 5.0E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 169 178 5.0E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 PRINTS PR01181 Diaminopimelate decarboxylase signature 397 419 5.0E-26 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLSA_c42720 11b292b02e4e6d120300faab31e6bd27 431 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 296 2.0E-61 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CLSA_c09680 62574f2e0ed83285649988aec9a50976 77 Pfam PF13751 Transposase DDE domain 2 48 2.1E-11 T 12-10-2018 IPR025668 Transposase DDE domain CLSA_c18080 60e459d351f7336c2cd3cd925fabc69f 455 SUPERFAMILY SSF56796 30 443 1.57E-47 T 12-10-2018 CLSA_c18080 60e459d351f7336c2cd3cd925fabc69f 455 Pfam PF13685 Iron-containing alcohol dehydrogenase 32 296 5.2E-79 T 12-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 CLSA_c18080 60e459d351f7336c2cd3cd925fabc69f 455 Gene3D G3DSA:3.40.50.1970 19 178 6.9E-33 T 12-10-2018 CLSA_c45310 9fe3eddbbdaa5c8a359dfe4d010fbc07 112 Pfam PF12643 MazG-like family 14 100 3.6E-23 T 12-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 CLSA_c08480 3e8d05e080ac05a322d4e3d6ef504c5e 182 SUPERFAMILY SSF143990 14 181 6.54E-53 T 12-10-2018 IPR037238 YbiA-like superfamily CLSA_c08480 3e8d05e080ac05a322d4e3d6ef504c5e 182 Gene3D G3DSA:1.10.357.40 19 181 2.6E-43 T 12-10-2018 IPR037238 YbiA-like superfamily CLSA_c08480 3e8d05e080ac05a322d4e3d6ef504c5e 182 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 22 180 6.4E-52 T 12-10-2018 IPR012816 NADAR CLSA_c08480 3e8d05e080ac05a322d4e3d6ef504c5e 182 Pfam PF08719 Domain of unknown function (DUF1768) 22 180 9.1E-53 T 12-10-2018 IPR012816 NADAR CLSA_c42040 63ce86daeb77a4cc5265bf190ab71a10 267 Pfam PF01061 ABC-2 type transporter 19 225 3.8E-22 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLSA_c21540 06411c4bee67cd8bbc90443f8f9143b9 251 SUPERFAMILY SSF46565 1 57 4.06E-9 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c21540 06411c4bee67cd8bbc90443f8f9143b9 251 PRINTS PR00625 DnaJ domain signature 5 23 2.0E-5 T 12-10-2018 IPR001623 DnaJ domain CLSA_c21540 06411c4bee67cd8bbc90443f8f9143b9 251 PRINTS PR00625 DnaJ domain signature 39 59 2.0E-5 T 12-10-2018 IPR001623 DnaJ domain CLSA_c21540 06411c4bee67cd8bbc90443f8f9143b9 251 Gene3D G3DSA:1.10.287.110 1 67 1.2E-8 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c09490 e7774c197608d4e0e691a7f7ca309469 145 Pfam PF05598 Transposase domain (DUF772) 1 61 6.6E-8 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c39370 65833dd3cf800f1662a54632c9c905ab 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 105 14.463 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLSA_c39370 65833dd3cf800f1662a54632c9c905ab 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 21 104 7.5E-16 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLSA_c39370 65833dd3cf800f1662a54632c9c905ab 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 104 1.7E-22 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLSA_c39370 65833dd3cf800f1662a54632c9c905ab 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 5.7E-7 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLSA_c39370 65833dd3cf800f1662a54632c9c905ab 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 5.7E-7 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLSA_c39370 65833dd3cf800f1662a54632c9c905ab 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 5.7E-7 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLSA_c01920 008a2e630fb836925df13c9b1cbdddb4 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.961 T 12-10-2018 IPR022973 Ribosomal protein L10 CLSA_c01920 008a2e630fb836925df13c9b1cbdddb4 167 Gene3D G3DSA:3.30.70.1730 3 133 1.0E-40 T 12-10-2018 CLSA_c01920 008a2e630fb836925df13c9b1cbdddb4 167 SUPERFAMILY SSF160369 3 160 1.23E-53 T 12-10-2018 CLSA_c01920 008a2e630fb836925df13c9b1cbdddb4 167 Pfam PF00466 Ribosomal protein L10 3 101 4.3E-27 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CLSA_c01920 008a2e630fb836925df13c9b1cbdddb4 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 28 144 8.0E-9 T 12-10-2018 CLSA_c17350 5c147646df8a9103f3e78e592d9d920d 207 Pfam PF02659 Putative manganese efflux pump 39 202 1.4E-11 T 12-10-2018 IPR003810 Putative manganese efflux pump CLSA_c25120 257f18cadf26e09a3339147e0c8d21e1 200 Gene3D G3DSA:3.20.20.70 1 199 1.1E-48 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CLSA_c25120 257f18cadf26e09a3339147e0c8d21e1 200 SUPERFAMILY SSF51391 3 197 8.63E-39 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c25120 257f18cadf26e09a3339147e0c8d21e1 200 Pfam PF02581 Thiamine monophosphate synthase 6 187 1.4E-38 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLSA_c44570 80cd8620fd2053bb6b463074e3ca5f3f 285 Pfam PF13276 HTH-like domain 121 175 4.4E-11 T 12-10-2018 IPR025948 HTH-like domain CLSA_c44570 80cd8620fd2053bb6b463074e3ca5f3f 285 SUPERFAMILY SSF53098 198 280 7.02E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c19930 a7c5ddbfb13b2a9ed9424c3835a71cae 260 TIGRFAM TIGR02592 cas_Cas5h: CRISPR-associated protein Cas5, subtype I-B/HMARI 2 259 2.8E-54 T 12-10-2018 IPR013421 CRISPR-associated protein Cas5, HALMA CLSA_c19930 a7c5ddbfb13b2a9ed9424c3835a71cae 260 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 4.9E-5 T 12-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal CLSA_c19930 a7c5ddbfb13b2a9ed9424c3835a71cae 260 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 5 178 9.8E-5 T 12-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 CLSA_c45130 e7aac3b09af1d59fc65edc10d2d1f202 143 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 138 5.8E-32 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ CLSA_c04710 268182a8c78c5086bece6782b40ab978 192 Gene3D G3DSA:3.40.50.1110 2 189 1.4E-47 T 12-10-2018 IPR036514 SGNH hydrolase superfamily CLSA_c04710 268182a8c78c5086bece6782b40ab978 192 SUPERFAMILY SSF52266 2 188 1.68E-37 T 12-10-2018 CLSA_c04710 268182a8c78c5086bece6782b40ab978 192 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 179 1.6E-22 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain CLSA_c39460 01cbb428453ac1149dc8c4d4aaeaf0c3 332 SUPERFAMILY SSF51735 1 329 1.99E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c39460 01cbb428453ac1149dc8c4d4aaeaf0c3 332 Gene3D G3DSA:3.40.50.720 4 314 1.7E-90 T 12-10-2018 CLSA_c39460 01cbb428453ac1149dc8c4d4aaeaf0c3 332 Gene3D G3DSA:3.90.25.10 193 326 1.7E-90 T 12-10-2018 CLSA_c39460 01cbb428453ac1149dc8c4d4aaeaf0c3 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.2E-57 T 12-10-2018 IPR016040 NAD(P)-binding domain CLSA_c37140 062bac602bafdb2bf8316881c17fbe35 197 Gene3D G3DSA:1.10.357.10 11 187 4.6E-38 T 12-10-2018 CLSA_c37140 062bac602bafdb2bf8316881c17fbe35 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 65 3.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c37140 062bac602bafdb2bf8316881c17fbe35 197 SUPERFAMILY SSF46689 12 75 4.42E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c33260 f2d56f2455b39b3e1976182352f75a82 236 Gene3D G3DSA:3.40.50.300 1 235 1.8E-64 T 12-10-2018 CLSA_c33260 f2d56f2455b39b3e1976182352f75a82 236 Pfam PF00005 ABC transporter 17 162 9.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c33260 f2d56f2455b39b3e1976182352f75a82 236 SUPERFAMILY SSF52540 2 233 5.22E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c33260 f2d56f2455b39b3e1976182352f75a82 236 SMART SM00382 26 213 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c33260 f2d56f2455b39b3e1976182352f75a82 236 PIRSF PIRSF039137 1 235 3.6E-112 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CLSA_c33260 f2d56f2455b39b3e1976182352f75a82 236 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c24760 30bad529a283c34c2c7dec20217036d9 330 Gene3D G3DSA:1.20.58.1130 10 220 1.7E-38 T 12-10-2018 CLSA_c24760 30bad529a283c34c2c7dec20217036d9 330 Gene3D G3DSA:1.20.1420.30 35 319 1.7E-38 T 12-10-2018 CLSA_c24760 30bad529a283c34c2c7dec20217036d9 330 Pfam PF01699 Sodium/calcium exchanger protein 5 157 5.9E-13 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLSA_c24760 30bad529a283c34c2c7dec20217036d9 330 Pfam PF01699 Sodium/calcium exchanger protein 192 325 2.5E-11 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLSA_c44380 62487942754c20da90bf0d5814c2043e 59 SUPERFAMILY SSF47598 1 38 8.89E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CLSA_c44380 62487942754c20da90bf0d5814c2043e 59 Pfam PF08681 Protein of unknown function (DUF1778) 6 38 2.0E-4 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 CLSA_c27260 d3edc9acbd9b2438d53d1fe8d2437b26 129 PIRSF PIRSF018579 1 112 1.6E-44 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 CLSA_c27260 d3edc9acbd9b2438d53d1fe8d2437b26 129 Pfam PF06947 Protein of unknown function (DUF1290) 22 106 1.1E-36 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 CLSA_c36580 d8882e69547af76615a3a55de2c0bb79 101 SUPERFAMILY SSF48295 2 62 1.83E-13 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CLSA_c36580 d8882e69547af76615a3a55de2c0bb79 101 Gene3D G3DSA:1.10.10.60 8 76 2.9E-5 T 12-10-2018 CLSA_c36580 d8882e69547af76615a3a55de2c0bb79 101 Pfam PF13518 Helix-turn-helix domain 11 56 2.8E-10 T 12-10-2018 CLSA_c28750 7058420fd067ddb919dde21314553b93 96 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 9 88 3.2E-24 T 12-10-2018 IPR003849 Preprotein translocase YajC CLSA_c28750 7058420fd067ddb919dde21314553b93 96 Pfam PF02699 Preprotein translocase subunit 11 87 1.1E-27 T 12-10-2018 IPR003849 Preprotein translocase YajC CLSA_c28750 7058420fd067ddb919dde21314553b93 96 SMART SM01323 7 90 4.4E-36 T 12-10-2018 IPR003849 Preprotein translocase YajC CLSA_c28750 7058420fd067ddb919dde21314553b93 96 PRINTS PR01853 Bacterial YajC preprotein translocase signature 9 29 3.7E-13 T 12-10-2018 IPR003849 Preprotein translocase YajC CLSA_c28750 7058420fd067ddb919dde21314553b93 96 PRINTS PR01853 Bacterial YajC preprotein translocase signature 47 65 3.7E-13 T 12-10-2018 IPR003849 Preprotein translocase YajC CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 Gene3D G3DSA:3.40.50.300 11 184 1.6E-67 T 12-10-2018 CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 185 8.1E-75 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 SUPERFAMILY SSF52540 5 191 5.18E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 Gene3D G3DSA:3.30.63.10 38 97 1.6E-67 T 12-10-2018 CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 SMART SM00072 6 188 1.2E-59 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 Pfam PF00625 Guanylate kinase 9 185 1.3E-51 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CLSA_c13620 45b3e6ee0fac90ce2f4a7b9b0da00c2f 212 Hamap MF_00328 Guanylate kinase [gmk]. 5 188 37.676 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CLSA_c00310 712de53a21c1227bf643d4aa95fa4426 378 Gene3D G3DSA:3.40.1350.10 240 378 1.7E-18 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CLSA_c00310 712de53a21c1227bf643d4aa95fa4426 378 Pfam PF09002 Domain of unknown function (DUF1887) 7 374 3.1E-26 T 12-10-2018 IPR015093 Protein of unknown function DUF1887 CLSA_c00310 712de53a21c1227bf643d4aa95fa4426 378 SUPERFAMILY SSF52980 1 376 1.34E-65 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLSA_c41390 fff6fdedfb34feaee6b9f42b64d3496e 84 Gene3D G3DSA:1.20.1280.290 1 84 1.1E-27 T 12-10-2018 CLSA_c41390 fff6fdedfb34feaee6b9f42b64d3496e 84 Pfam PF04193 PQ loop repeat 2 51 5.2E-11 T 12-10-2018 IPR006603 PQ-loop repeat CLSA_c41390 fff6fdedfb34feaee6b9f42b64d3496e 84 SMART SM00679 12 43 6.3E-5 T 12-10-2018 IPR006603 PQ-loop repeat CLSA_c30060 a5899cc61b24fc269287a58b94fa2818 869 Pfam PF01807 CHC2 zinc finger 6 84 3.1E-7 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLSA_c30060 a5899cc61b24fc269287a58b94fa2818 869 SMART SM00400 30 84 5.9E-4 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLSA_c30060 a5899cc61b24fc269287a58b94fa2818 869 Gene3D G3DSA:3.40.1360.10 162 285 1.2E-5 T 12-10-2018 CLSA_c30060 a5899cc61b24fc269287a58b94fa2818 869 SUPERFAMILY SSF57783 4 84 4.59E-12 T 12-10-2018 CLSA_c30060 a5899cc61b24fc269287a58b94fa2818 869 Gene3D G3DSA:3.90.580.10 2 93 2.3E-12 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CLSA_c05980 4edf0486b56eca23f9d20cef904aa3fd 304 Pfam PF00929 Exonuclease 4 186 2.5E-14 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c05980 4edf0486b56eca23f9d20cef904aa3fd 304 SMART SM00479 2 195 9.4E-9 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CLSA_c05980 4edf0486b56eca23f9d20cef904aa3fd 304 SUPERFAMILY SSF53098 2 199 8.28E-24 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c05980 4edf0486b56eca23f9d20cef904aa3fd 304 Gene3D G3DSA:3.30.420.10 2 197 1.5E-28 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CLSA_c24360 c0eb9605e99c7657088afc1f0e87884d 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.0E-20 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CLSA_c24360 c0eb9605e99c7657088afc1f0e87884d 393 Pfam PF07670 Nucleoside recognition 91 186 1.7E-5 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLSA_c24360 c0eb9605e99c7657088afc1f0e87884d 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 1.1E-55 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CLSA_c09520 1b09522d3038a805ab62cf0bb9961f8c 620 Pfam PF03235 Protein of unknown function DUF262 10 209 9.1E-10 T 12-10-2018 IPR004919 Domain of unknown function DUF262 CLSA_c24290 63589fa2061f319e5cb4ebefd78d7531 488 Pfam PF14199 Domain of unknown function (DUF4317) 14 484 1.2E-162 T 12-10-2018 IPR025466 Protein of unknown function DUF4317 CLSA_c34520 5df2b0c21639ab4b5057cbddf1ea93e0 211 Gene3D G3DSA:3.40.50.150 26 203 1.3E-34 T 12-10-2018 CLSA_c34520 5df2b0c21639ab4b5057cbddf1ea93e0 211 SUPERFAMILY SSF53335 7 166 7.76E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c34520 5df2b0c21639ab4b5057cbddf1ea93e0 211 Pfam PF13649 Methyltransferase domain 51 144 4.7E-18 T 12-10-2018 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 Pfam PF12833 Helix-turn-helix domain 245 323 1.7E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 322 5.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 306 5.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 Gene3D G3DSA:1.10.10.60 218 328 6.2E-23 T 12-10-2018 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 318 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 SMART SM00342 242 322 1.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLSA_c16970 c96f03947bd003364ebd6272cae02fb6 330 SUPERFAMILY SSF46689 275 324 6.45E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c40150 250b366405bfa0750e1b2a85417795d1 173 Pfam PF17099 Tryptophan transporter TrpP 2 162 6.7E-45 T 12-10-2018 IPR031360 Tryptophan transporter TrpP CLSA_c40150 250b366405bfa0750e1b2a85417795d1 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 161 6.0E-30 T 12-10-2018 CLSA_c39420 218387d3d3942c55ad74fd72007a1b8b 530 Pfam PF00350 Dynamin family 87 241 1.0E-9 T 12-10-2018 IPR022812 Dynamin superfamily CLSA_c39420 218387d3d3942c55ad74fd72007a1b8b 530 Gene3D G3DSA:3.40.50.300 86 318 9.5E-23 T 12-10-2018 CLSA_c39420 218387d3d3942c55ad74fd72007a1b8b 530 SUPERFAMILY SSF52540 72 306 1.93E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c27430 1c1f097e797f9acdfbb799cc73d1ce03 303 Pfam PF08812 YtxC-like family 65 280 1.5E-68 T 12-10-2018 IPR014199 Sporulation protein YtxC CLSA_c27430 1c1f097e797f9acdfbb799cc73d1ce03 303 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 6 282 2.6E-78 T 12-10-2018 IPR014199 Sporulation protein YtxC CLSA_c40870 71f205537c0f34c4b60d8d8e97842154 118 Gene3D G3DSA:1.20.1270.360 11 117 1.3E-27 T 12-10-2018 CLSA_c18030 30b46ab392b2a459a404c6a3af73417d 387 Pfam PF13679 Methyltransferase domain 153 288 2.8E-36 T 12-10-2018 IPR025714 Methyltransferase domain CLSA_c18030 30b46ab392b2a459a404c6a3af73417d 387 SUPERFAMILY SSF53335 159 300 9.51E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c18030 30b46ab392b2a459a404c6a3af73417d 387 Gene3D G3DSA:3.40.50.150 140 313 2.1E-15 T 12-10-2018 CLSA_c18140 a00c65711c3b60f94400ddadb0a0c89b 325 Pfam PF13407 Periplasmic binding protein domain 36 293 3.3E-48 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c18140 a00c65711c3b60f94400ddadb0a0c89b 325 Gene3D G3DSA:3.40.50.2300 37 294 1.0E-72 T 12-10-2018 CLSA_c18140 a00c65711c3b60f94400ddadb0a0c89b 325 Gene3D G3DSA:3.40.50.2300 137 274 1.0E-72 T 12-10-2018 CLSA_c18140 a00c65711c3b60f94400ddadb0a0c89b 325 SUPERFAMILY SSF53822 31 324 1.02E-66 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c01670 bf799d233c8a44a08b3464ae91c42405 214 Pfam PF13483 Beta-lactamase superfamily domain 2 162 3.6E-45 T 12-10-2018 CLSA_c01670 bf799d233c8a44a08b3464ae91c42405 214 SUPERFAMILY SSF56281 1 186 2.03E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c01670 bf799d233c8a44a08b3464ae91c42405 214 Gene3D G3DSA:3.60.15.10 1 210 1.7E-54 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c28430 d05366e463867fcacf9ab9cbc46d5165 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 23 88 1.7E-15 T 12-10-2018 IPR008792 Coenzyme PQQ synthesis D CLSA_c20180 af910d8b57d0db8a2e64bebb986ee44e 372 Pfam PF13786 Domain of unknown function (DUF4179) 41 133 2.7E-18 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 CLSA_c20180 af910d8b57d0db8a2e64bebb986ee44e 372 Gene3D G3DSA:2.60.40.1640 225 371 7.1E-37 T 12-10-2018 CLSA_c20180 af910d8b57d0db8a2e64bebb986ee44e 372 Gene3D G3DSA:2.60.40.1630 74 224 3.4E-42 T 12-10-2018 CLSA_c43080 d489f1776a626307ef33edb930b80c7d 296 Pfam PF02687 FtsX-like permease family 201 291 1.3E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c43080 d489f1776a626307ef33edb930b80c7d 296 PIRSF PIRSF003097 1 296 6.9E-78 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 CLSA_c43080 d489f1776a626307ef33edb930b80c7d 296 Gene3D G3DSA:3.30.70.3040 47 158 5.3E-13 T 12-10-2018 CLSA_c03530 a88dda397bf9db84cbaaa800ceb1a212 193 Pfam PF00882 Zinc dependent phospholipase C 4 154 7.1E-18 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 CLSA_c03530 a88dda397bf9db84cbaaa800ceb1a212 193 SUPERFAMILY SSF48537 16 176 1.11E-5 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 CLSA_c39520 b96c726420f2ae1c8c7113b8fe6f4ecc 244 Pfam PF02348 Cytidylyltransferase 4 204 2.8E-27 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CLSA_c39520 b96c726420f2ae1c8c7113b8fe6f4ecc 244 Gene3D G3DSA:3.90.550.10 1 212 2.8E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c39520 b96c726420f2ae1c8c7113b8fe6f4ecc 244 SUPERFAMILY SSF53448 1 206 2.18E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c06270 9680871677529fd3c9d4a5ccef3e68f7 252 Pfam PF12730 ABC-2 family transporter protein 4 175 5.2E-41 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c08700 1f0cfc470cb75618cf71d3c97a553b55 217 Pfam PF13346 ABC-2 family transporter protein 11 212 9.6E-16 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like CLSA_c11100 e6d1c2bd67b4c9a76782c370a2bb5116 263 SUPERFAMILY SSF102705 1 262 3.53E-83 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CLSA_c11100 e6d1c2bd67b4c9a76782c370a2bb5116 263 Gene3D G3DSA:3.40.1390.30 5 233 1.2E-71 T 12-10-2018 CLSA_c11100 e6d1c2bd67b4c9a76782c370a2bb5116 263 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 255 1.3E-63 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLSA_c11100 e6d1c2bd67b4c9a76782c370a2bb5116 263 Gene3D G3DSA:3.40.1390.30 101 225 1.2E-71 T 12-10-2018 CLSA_c11100 e6d1c2bd67b4c9a76782c370a2bb5116 263 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 247 3.4E-79 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLSA_c21220 008eb87c23dfc02996bb4873d3d34bc7 254 SUPERFAMILY SSF53213 5 254 1.02E-76 T 12-10-2018 CLSA_c21220 008eb87c23dfc02996bb4873d3d34bc7 254 Gene3D G3DSA:3.40.830.10 1 254 3.0E-80 T 12-10-2018 CLSA_c21220 008eb87c23dfc02996bb4873d3d34bc7 254 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 21 250 1.2E-44 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CLSA_c21220 008eb87c23dfc02996bb4873d3d34bc7 254 PIRSF PIRSF006157 1 254 1.2E-88 T 12-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CLSA_c41350 f8e0b08265981dd6a0d6013112ba34c7 335 Pfam PF13240 zinc-ribbon domain 3 25 8.4E-10 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 CLSA_c36940 10ae074ba4d9226d35ca5e49067deb9f 165 Gene3D G3DSA:3.90.960.10 2 165 5.7E-46 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c36940 10ae074ba4d9226d35ca5e49067deb9f 165 SUPERFAMILY SSF55826 6 162 1.07E-37 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c36940 10ae074ba4d9226d35ca5e49067deb9f 165 Pfam PF04073 Aminoacyl-tRNA editing domain 25 151 3.0E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 SUPERFAMILY SSF55874 269 415 1.44E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 7.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 7.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 7.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 7.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 414 1.0E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 Gene3D G3DSA:3.30.565.10 270 416 6.2E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLSA_c08790 e8a8e39482bd26f0c56e6631b5a23a9a 416 SMART SM00387 309 416 1.8E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CLSA_c06220 e25227be618cbde094458aad62f6d560 283 SUPERFAMILY SSF54631 218 271 1.22E-6 T 12-10-2018 CLSA_c06220 e25227be618cbde094458aad62f6d560 283 Pfam PF02163 Peptidase family M50 102 160 2.8E-7 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CLSA_c06220 e25227be618cbde094458aad62f6d560 283 Gene3D G3DSA:3.10.580.10 186 271 1.3E-5 T 12-10-2018 CLSA_c35100 d556106cdfdaedfd85a9506e2fab707d 74 Pfam PF07872 Protein of unknown function (DUF1659) 9 51 7.8E-16 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 CLSA_c22650 9b3d79339bd794de1bb158d51b07d136 199 Gene3D G3DSA:3.40.50.1000 1 175 2.9E-11 T 12-10-2018 IPR023214 HAD superfamily CLSA_c22650 9b3d79339bd794de1bb158d51b07d136 199 PIRSF PIRSF021362 3 192 5.2E-61 T 12-10-2018 IPR009206 Nucleotidase, putative CLSA_c22650 9b3d79339bd794de1bb158d51b07d136 199 SUPERFAMILY SSF56784 5 162 9.74E-19 T 12-10-2018 IPR036412 HAD-like superfamily CLSA_c22650 9b3d79339bd794de1bb158d51b07d136 199 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 6 182 2.4E-10 T 12-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 CLSA_c17940 cd2a5ce9fd24b6c5e377660309a414d6 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 24 33 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c17940 cd2a5ce9fd24b6c5e377660309a414d6 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 9 68 7.4E-27 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c17940 cd2a5ce9fd24b6c5e377660309a414d6 68 Gene3D G3DSA:1.10.8.910 9 68 5.2E-24 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c11290 035467fb8cb3eea99c044cc43f8e324a 243 Pfam PF02811 PHP domain 6 128 1.2E-6 T 12-10-2018 IPR004013 PHP domain GO:0003824 CLSA_c11290 035467fb8cb3eea99c044cc43f8e324a 243 Gene3D G3DSA:3.20.20.140 3 242 4.9E-67 T 12-10-2018 CLSA_c11290 035467fb8cb3eea99c044cc43f8e324a 243 SUPERFAMILY SSF89550 5 233 2.09E-57 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLSA_c11290 035467fb8cb3eea99c044cc43f8e324a 243 SMART SM00481 5 79 7.4E-9 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLSA_c00900 86cb0344965102a695ce7e510b90b162 291 Gene3D G3DSA:2.70.98.10 2 291 3.6E-101 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CLSA_c00900 86cb0344965102a695ce7e510b90b162 291 SUPERFAMILY SSF74650 2 288 3.77E-52 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 CLSA_c00900 86cb0344965102a695ce7e510b90b162 291 Pfam PF01263 Aldose 1-epimerase 2 271 2.3E-30 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CLSA_c44070 295f26559e2be86af35a7175886fec1d 92 Pfam PF10704 Protein of unknown function (DUF2508) 21 77 2.9E-14 T 12-10-2018 IPR019644 Protein of unknown function DUF2508 CLSA_c07340 09f41413316e27a374bd7802a150cf62 175 PIRSF PIRSF024534 2 167 1.8E-49 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW CLSA_c07340 09f41413316e27a374bd7802a150cf62 175 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 10 154 3.7E-53 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW CLSA_c07340 09f41413316e27a374bd7802a150cf62 175 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 8 152 1.9E-46 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW CLSA_c07340 09f41413316e27a374bd7802a150cf62 175 Gene3D G3DSA:1.10.1760.20 1 165 1.0E-14 T 12-10-2018 CLSA_c36190 32cfe1e13235d7cb082a577646b26343 123 Gene3D G3DSA:2.30.110.10 1 123 3.3E-49 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CLSA_c36190 32cfe1e13235d7cb082a577646b26343 123 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 95 5.0E-9 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CLSA_c36190 32cfe1e13235d7cb082a577646b26343 123 SUPERFAMILY SSF50475 1 122 1.24E-28 T 12-10-2018 CLSA_c13680 70691a444fc8095492ec5996346db043 229 Pfam PF04298 Putative neutral zinc metallopeptidase 10 225 3.5E-92 T 12-10-2018 IPR007395 Putative neutral zinc metallopeptidase CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 Pfam PF00664 ABC transporter transmembrane region 25 295 3.0E-16 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 SMART SM00382 364 550 9.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 Gene3D G3DSA:1.20.1560.10 1 326 4.1E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 Pfam PF00005 ABC transporter 355 504 5.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 SUPERFAMILY SSF90123 6 324 1.83E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 SUPERFAMILY SSF52540 332 573 1.85E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 Gene3D G3DSA:3.40.50.300 330 581 1.4E-85 T 12-10-2018 CLSA_c17010 5a1fcba4515466b19997efc3fd4a602d 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLSA_c08910 686d49987e1f6539cbf1d8a1ef0c41bb 568 Pfam PF01926 50S ribosome-binding GTPase 52 160 2.1E-11 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 CLSA_c08910 686d49987e1f6539cbf1d8a1ef0c41bb 568 Gene3D G3DSA:3.40.50.300 7 239 4.0E-22 T 12-10-2018 CLSA_c08910 686d49987e1f6539cbf1d8a1ef0c41bb 568 SUPERFAMILY SSF52540 46 200 6.75E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25330 d5d405789dded5fbc101ed7d51dc6ef6 327 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 40 55 - T 12-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 CLSA_c25330 d5d405789dded5fbc101ed7d51dc6ef6 327 SUPERFAMILY SSF56317 6 287 1.26E-62 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CLSA_c25330 d5d405789dded5fbc101ed7d51dc6ef6 327 Gene3D G3DSA:3.60.110.10 1 282 1.4E-93 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CLSA_c25330 d5d405789dded5fbc101ed7d51dc6ef6 327 Pfam PF00795 Carbon-nitrogen hydrolase 9 278 1.3E-53 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CLSA_c37850 23781ebac170150ba45a6896bee43b4d 251 SUPERFAMILY SSF51219 44 249 6.28E-43 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily CLSA_c37850 23781ebac170150ba45a6896bee43b4d 251 Gene3D G3DSA:3.60.160.10 33 251 2.6E-44 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily CLSA_c37850 23781ebac170150ba45a6896bee43b4d 251 Pfam PF01987 Mitochondrial biogenesis AIM24 53 249 3.3E-30 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 CLSA_c22950 cdfe6a0aa99407771a49ba2c7a687a6e 203 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 29 174 1.5E-38 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 CLSA_c26600 419221755088cc89a6fcce8d4f3a9a0e 210 Pfam PF01944 Stage II sporulation protein M 23 198 2.8E-24 T 12-10-2018 IPR002798 Stage II sporulation protein M-like CLSA_c26600 419221755088cc89a6fcce8d4f3a9a0e 210 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 7 202 8.7E-49 T 12-10-2018 IPR014196 Stage II sporulation protein M CLSA_c26600 419221755088cc89a6fcce8d4f3a9a0e 210 PIRSF PIRSF038973 1 209 7.0E-69 T 12-10-2018 IPR014196 Stage II sporulation protein M CLSA_c33770 003ee4d554d3f9ed93999a0dc623b8b4 262 Pfam PF00756 Putative esterase 9 255 1.8E-20 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CLSA_c33770 003ee4d554d3f9ed93999a0dc623b8b4 262 Gene3D G3DSA:3.40.50.1820 2 261 3.3E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c33770 003ee4d554d3f9ed93999a0dc623b8b4 262 SUPERFAMILY SSF53474 5 259 1.19E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c04360 19d9dd8261fdd84b0eb9c5d69b30ea35 241 Pfam PF01609 Transposase DDE domain 116 206 2.5E-9 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c04360 19d9dd8261fdd84b0eb9c5d69b30ea35 241 Pfam PF05598 Transposase domain (DUF772) 36 98 6.9E-6 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c37310 35e34a18e83b30ab89f1082d8bfb01b3 247 ProDom PD315856 ORF119 CPE0798 YOXB 1 243 2.0E-90 T 12-10-2018 IPR020530 Uncharacterised protein family, YoxB CLSA_c37310 35e34a18e83b30ab89f1082d8bfb01b3 247 SUPERFAMILY SSF52141 39 232 5.42E-9 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLSA_c38690 507bd123b774e31e6f2b5a9e4b53d3bb 382 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 329 5.3E-43 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c03300 2241b43dd56f6273587bfc50d361be6a 346 Pfam PF12791 Anti-sigma factor N-terminus 160 197 3.6E-6 T 12-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal CLSA_c24330 9a4edb35e7199954e104d6c438f71cee 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-19 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CLSA_c24330 9a4edb35e7199954e104d6c438f71cee 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 3.3E-57 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CLSA_c32830 c2f88dcc1b2d2731f48798697f61c97d 95 Pfam PF07875 Coat F domain 15 77 8.5E-20 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c12310 0fcde4b760325e69bfac56b43e047aee 236 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 56 220 9.0E-57 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CLSA_c12310 0fcde4b760325e69bfac56b43e047aee 236 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 1 236 60.306 T 12-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CLSA_c12310 0fcde4b760325e69bfac56b43e047aee 236 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 55 227 1.6E-53 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 CLSA_c28860 e11031529925c7da290c2cd3fb313236 275 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 1.9E-29 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CLSA_c28860 e11031529925c7da290c2cd3fb313236 275 SUPERFAMILY SSF53613 6 273 8.11E-60 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c28860 e11031529925c7da290c2cd3fb313236 275 Gene3D G3DSA:3.40.1190.20 2 275 1.3E-70 T 12-10-2018 IPR029056 Ribokinase-like CLSA_c21000 c61315968f00b61594b641bac31a67b0 862 Pfam PF02687 FtsX-like permease family 302 398 2.4E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c21000 c61315968f00b61594b641bac31a67b0 862 Pfam PF02687 FtsX-like permease family 759 852 5.1E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c21000 c61315968f00b61594b641bac31a67b0 862 Pfam PF12704 MacB-like periplasmic core domain 19 238 1.8E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain CLSA_c35950 e8e1263de2b689981e782bb0f2f4ddb9 169 SUPERFAMILY SSF49777 8 163 2.22E-30 T 12-10-2018 IPR036610 PEBP-like superfamily CLSA_c35950 e8e1263de2b689981e782bb0f2f4ddb9 169 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 164 9.5E-28 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein CLSA_c35950 e8e1263de2b689981e782bb0f2f4ddb9 169 Gene3D G3DSA:3.90.280.10 3 166 2.2E-40 T 12-10-2018 IPR036610 PEBP-like superfamily CLSA_c35950 e8e1263de2b689981e782bb0f2f4ddb9 169 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 26 166 2.9E-38 T 12-10-2018 IPR005247 YbhB/YbcL CLSA_c05060 7bec1d16031ce889f79e1afaebc9edd0 164 PIRSF PIRSF006019 1 162 1.4E-37 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLSA_c05060 7bec1d16031ce889f79e1afaebc9edd0 164 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 134 1.3E-15 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CLSA_c05060 7bec1d16031ce889f79e1afaebc9edd0 164 Gene3D G3DSA:3.40.140.10 1 161 1.3E-30 T 12-10-2018 CLSA_c05060 7bec1d16031ce889f79e1afaebc9edd0 164 SUPERFAMILY SSF53927 7 141 5.38E-23 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CLSA_c30920 95bce165cd3b2140b39cdc6098acf2ea 370 Gene3D G3DSA:3.90.1640.20 14 335 4.3E-61 T 12-10-2018 CLSA_c30920 95bce165cd3b2140b39cdc6098acf2ea 370 Pfam PF14336 Domain of unknown function (DUF4392) 15 327 1.0E-87 T 12-10-2018 IPR025504 Domain of unknown function DUF4392 KEGG: 00471+4.2.1.48 CLSA_c42640 b4eef5c0687036d4813c07eaee8e3884 219 Gene3D G3DSA:1.10.3720.10 1 219 1.5E-60 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c42640 b4eef5c0687036d4813c07eaee8e3884 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 108 3.1E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CLSA_c42640 b4eef5c0687036d4813c07eaee8e3884 219 SUPERFAMILY SSF161098 11 199 5.1E-46 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c42640 b4eef5c0687036d4813c07eaee8e3884 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 1.0E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c41280 d1484badeb958426459b649b2e652fca 499 Pfam PF04932 O-Antigen ligase 255 417 1.2E-9 T 12-10-2018 IPR007016 O-antigen ligase-related CLSA_c34050 b76bd2ef800b287997eeb333e16bf28c 312 Pfam PF03547 Membrane transport protein 14 154 2.1E-14 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLSA_c34050 b76bd2ef800b287997eeb333e16bf28c 312 Pfam PF03547 Membrane transport protein 163 308 6.2E-17 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLSA_c18280 bd99035b5293aff3dca9a4d2a219c62c 275 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 30 253 3.1E-40 T 12-10-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CLSA_c42250 6fa5e271591a046723e5cdea3af1e24c 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 335 4.6E-146 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CLSA_c42250 6fa5e271591a046723e5cdea3af1e24c 356 SUPERFAMILY SSF51735 1 347 9.23E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c42250 6fa5e271591a046723e5cdea3af1e24c 356 Gene3D G3DSA:3.40.50.720 4 320 1.5E-129 T 12-10-2018 CLSA_c42250 6fa5e271591a046723e5cdea3af1e24c 356 Gene3D G3DSA:3.90.25.10 201 329 1.5E-129 T 12-10-2018 CLSA_c42250 6fa5e271591a046723e5cdea3af1e24c 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 3.6E-97 T 12-10-2018 IPR016040 NAD(P)-binding domain CLSA_c20430 de964c3cb15bae16ecfc84d6b9991168 122 Gene3D G3DSA:3.40.50.2300 1 122 5.7E-35 T 12-10-2018 CLSA_c20430 de964c3cb15bae16ecfc84d6b9991168 122 SUPERFAMILY SSF52172 1 118 2.42E-33 T 12-10-2018 IPR011006 CheY-like superfamily CLSA_c20430 de964c3cb15bae16ecfc84d6b9991168 122 SMART SM00448 2 113 6.0E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c20430 de964c3cb15bae16ecfc84d6b9991168 122 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLSA_c03050 37a04764acae9c17dd88fef337da953a 413 Pfam PF12698 ABC-2 family transporter protein 19 372 9.7E-28 T 12-10-2018 CLSA_c38300 d0160d30e99fd5f89003fd4898a7d155 304 Gene3D G3DSA:3.30.1380.10 114 258 9.8E-13 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CLSA_c38300 d0160d30e99fd5f89003fd4898a7d155 304 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 192 259 4.6E-18 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 CLSA_c38300 d0160d30e99fd5f89003fd4898a7d155 304 SUPERFAMILY SSF55166 181 265 7.85E-19 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CLSA_c16830 c0739f7ebb4ffec319467753e80cbce9 233 Gene3D G3DSA:3.40.630.30 28 233 4.2E-16 T 12-10-2018 CLSA_c16830 c0739f7ebb4ffec319467753e80cbce9 233 SUPERFAMILY SSF55729 146 231 1.46E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase CLSA_c16830 c0739f7ebb4ffec319467753e80cbce9 233 Pfam PF00583 Acetyltransferase (GNAT) family 140 230 4.0E-12 T 12-10-2018 IPR000182 GNAT domain CLSA_c32750 2e3738d57d7535a60d882d374b182c86 107 Pfam PF02553 Cobalt transport protein component CbiN 10 79 1.8E-22 T 12-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CLSA_c32750 2e3738d57d7535a60d882d374b182c86 107 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 107 35.948 T 12-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CLSA_c29730 81a2cd694bf413c5239b4f11f01c1141 203 Gene3D G3DSA:2.160.10.10 98 202 8.9E-22 T 12-10-2018 CLSA_c29730 81a2cd694bf413c5239b4f11f01c1141 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 173 2.9E-5 T 12-10-2018 IPR001451 Hexapeptide repeat CLSA_c29730 81a2cd694bf413c5239b4f11f01c1141 203 SUPERFAMILY SSF51161 70 184 1.1E-24 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily CLSA_c36320 9aaa29dbdcc444ab2e3385dcabf9edc1 307 Pfam PF00535 Glycosyl transferase family 2 16 138 2.4E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c36320 9aaa29dbdcc444ab2e3385dcabf9edc1 307 Gene3D G3DSA:3.90.550.10 3 262 1.6E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c36320 9aaa29dbdcc444ab2e3385dcabf9edc1 307 SUPERFAMILY SSF53448 16 229 1.45E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41320 3da2ce8a8f3dd18a4a9eaf47b84c6bc8 349 Pfam PF00535 Glycosyl transferase family 2 26 176 2.1E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLSA_c41320 3da2ce8a8f3dd18a4a9eaf47b84c6bc8 349 Gene3D G3DSA:3.90.550.10 24 223 5.7E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c41320 3da2ce8a8f3dd18a4a9eaf47b84c6bc8 349 SUPERFAMILY SSF53448 24 247 3.21E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CLSA_c45080 722be82db4d637e306dad5531ec893ed 167 SUPERFAMILY SSF103642 144 165 6.87E-8 T 12-10-2018 CLSA_c45080 722be82db4d637e306dad5531ec893ed 167 Pfam PF02810 SEC-C motif 147 165 1.2E-10 T 12-10-2018 IPR004027 SEC-C motif CLSA_c45080 722be82db4d637e306dad5531ec893ed 167 Gene3D G3DSA:3.10.450.50 117 166 8.1E-10 T 12-10-2018 CLSA_c22130 8671547d3466ca71320ab900550c9f48 273 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 272 1.3E-107 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CLSA_c22130 8671547d3466ca71320ab900550c9f48 273 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 272 7.0E-125 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CLSA_c08140 d403c3957f4532779022ed2b4abff1d6 474 Gene3D G3DSA:2.30.110.50 57 99 4.6E-6 T 12-10-2018 CLSA_c08140 d403c3957f4532779022ed2b4abff1d6 474 SUPERFAMILY SSF69279 12 175 5.53E-23 T 12-10-2018 CLSA_c08140 d403c3957f4532779022ed2b4abff1d6 474 Gene3D G3DSA:3.55.50.10 100 164 4.6E-6 T 12-10-2018 CLSA_c26390 64fdf5b85a4d90750ac687f8b9bad077 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 212 2.0E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CLSA_c26390 64fdf5b85a4d90750ac687f8b9bad077 225 SUPERFAMILY SSF161098 4 212 1.2E-49 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c26390 64fdf5b85a4d90750ac687f8b9bad077 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 7 214 8.8E-77 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CLSA_c26390 64fdf5b85a4d90750ac687f8b9bad077 225 Gene3D G3DSA:1.10.3720.10 2 215 4.7E-57 T 12-10-2018 IPR035906 MetI-like superfamily CLSA_c17270 582bbaccdeebd82373941fc426f8e1e0 97 Gene3D G3DSA:3.30.70.260 2 95 4.7E-28 T 12-10-2018 CLSA_c17270 582bbaccdeebd82373941fc426f8e1e0 97 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 13 76 3.0E-19 T 12-10-2018 CLSA_c17270 582bbaccdeebd82373941fc426f8e1e0 97 Pfam PF13710 ACT domain 18 76 2.5E-10 T 12-10-2018 CLSA_c17270 582bbaccdeebd82373941fc426f8e1e0 97 SUPERFAMILY SSF55021 7 78 5.24E-16 T 12-10-2018 CLSA_c23140 8edde8715114f1e273aa49288bbf8874 74 Gene3D G3DSA:1.10.260.40 1 72 1.3E-5 T 12-10-2018 CLSA_c39790 8181f99f8f0e19b94f6ac013ce080d0b 199 SUPERFAMILY SSF103039 5 197 3.14E-51 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c39790 8181f99f8f0e19b94f6ac013ce080d0b 199 Gene3D G3DSA:3.40.1550.10 4 199 2.8E-57 T 12-10-2018 IPR028976 CheC-like superfamily CLSA_c39790 8181f99f8f0e19b94f6ac013ce080d0b 199 Pfam PF04509 CheC-like family 10 45 6.3E-14 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 CLSA_c39790 8181f99f8f0e19b94f6ac013ce080d0b 199 Pfam PF04509 CheC-like family 103 139 3.6E-10 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 212 431 2.1E-26 T 12-10-2018 IPR000477 Reverse transcriptase domain CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 275 293 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 358 371 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 428 434 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 221 233 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 340 353 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 373 384 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 207 220 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 294 304 2.5E-37 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLSA_c19850 f0d55b5dda7e5b30c49dd81a3ba3699d 501 SUPERFAMILY SSF56672 189 423 3.56E-17 T 12-10-2018 CLSA_c07490 891ac1510d80ad12d227446faa49b1ce 332 Gene3D G3DSA:3.40.50.2300 147 287 8.9E-93 T 12-10-2018 CLSA_c07490 891ac1510d80ad12d227446faa49b1ce 332 SUPERFAMILY SSF53822 40 309 1.27E-66 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c07490 891ac1510d80ad12d227446faa49b1ce 332 Gene3D G3DSA:3.40.50.2300 45 303 8.9E-93 T 12-10-2018 CLSA_c07490 891ac1510d80ad12d227446faa49b1ce 332 Pfam PF13407 Periplasmic binding protein domain 53 306 1.0E-45 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c08110 0fe724dbc188f826e92ce6a8decdedf7 875 SUPERFAMILY SSF53067 437 690 2.09E-8 T 12-10-2018 CLSA_c08110 0fe724dbc188f826e92ce6a8decdedf7 875 Gene3D G3DSA:3.30.420.40 427 478 9.1E-15 T 12-10-2018 CLSA_c08110 0fe724dbc188f826e92ce6a8decdedf7 875 Gene3D G3DSA:3.90.640.10 479 492 9.1E-15 T 12-10-2018 CLSA_c08110 0fe724dbc188f826e92ce6a8decdedf7 875 SUPERFAMILY SSF53067 225 420 2.2E-10 T 12-10-2018 CLSA_c08110 0fe724dbc188f826e92ce6a8decdedf7 875 Gene3D G3DSA:3.30.420.40 226 423 9.1E-15 T 12-10-2018 CLSA_c12160 922c7bc6439151b3e6da16e3625fb403 298 SUPERFAMILY SSF51658 8 296 1.38E-60 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily CLSA_c12160 922c7bc6439151b3e6da16e3625fb403 298 Pfam PF01261 Xylose isomerase-like TIM barrel 37 250 1.8E-26 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CLSA_c12160 922c7bc6439151b3e6da16e3625fb403 298 Hamap MF_01672 Inosose dehydratase [iolE]. 2 298 58.614 T 12-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 CLSA_c12160 922c7bc6439151b3e6da16e3625fb403 298 Gene3D G3DSA:3.20.20.150 3 296 8.5E-85 T 12-10-2018 CLSA_c12160 922c7bc6439151b3e6da16e3625fb403 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 295 1.3E-131 T 12-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 CLSA_c21560 2552f4438617ad952e8b5c843ab479b9 180 SUPERFAMILY SSF46785 9 178 5.57E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c21560 2552f4438617ad952e8b5c843ab479b9 180 Pfam PF03551 Transcriptional regulator PadR-like family 13 87 1.1E-6 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal CLSA_c21560 2552f4438617ad952e8b5c843ab479b9 180 Gene3D G3DSA:1.10.10.10 4 107 8.7E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c17480 fafd0b707a6a1b848fa403ed47e7d04d 261 SUPERFAMILY SSF51556 1 261 5.02E-32 T 12-10-2018 IPR032466 Metal-dependent hydrolase CLSA_c17480 fafd0b707a6a1b848fa403ed47e7d04d 261 Pfam PF04909 Amidohydrolase 3 261 2.0E-16 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CLSA_c17480 fafd0b707a6a1b848fa403ed47e7d04d 261 Gene3D G3DSA:3.20.20.140 1 261 3.1E-63 T 12-10-2018 CLSA_c03410 0546577999042c6204b4f67c192ac9bd 223 SUPERFAMILY SSF54001 90 215 8.17E-20 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CLSA_c03410 0546577999042c6204b4f67c192ac9bd 223 Gene3D G3DSA:3.90.1720.10 107 202 7.5E-8 T 12-10-2018 CLSA_c03410 0546577999042c6204b4f67c192ac9bd 223 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 106 197 5.0E-10 T 12-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CLSA_c15170 3b88591fb0cb10473763467f72394c65 245 SMART SM00287 54 117 6.9E-4 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c15170 3b88591fb0cb10473763467f72394c65 245 Gene3D G3DSA:2.30.30.40 54 122 4.1E-17 T 12-10-2018 CLSA_c15170 3b88591fb0cb10473763467f72394c65 245 Pfam PF08239 Bacterial SH3 domain 67 114 3.0E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type CLSA_c15170 3b88591fb0cb10473763467f72394c65 245 SUPERFAMILY SSF50044 84 126 2.98E-6 T 12-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 CLSA_c26980 a37136981a29881a155a323d2c657e93 306 SUPERFAMILY SSF52540 39 295 3.82E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c26980 a37136981a29881a155a323d2c657e93 306 SMART SM00382 137 276 7.7E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c26980 a37136981a29881a155a323d2c657e93 306 Gene3D G3DSA:3.40.50.300 123 283 1.0E-21 T 12-10-2018 CLSA_c26980 a37136981a29881a155a323d2c657e93 306 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 30 296 8.7E-121 T 12-10-2018 IPR014217 Sporulation stage III, protein AA CLSA_c27130 40b34c6aa1b7d11468b73f096a4f2a10 337 SUPERFAMILY SSF69304 110 319 2.75E-14 T 12-10-2018 CLSA_c30710 a129aa8349ca3c77aee5e04edba0d5d4 422 Pfam PF01609 Transposase DDE domain 117 322 7.7E-21 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c30710 a129aa8349ca3c77aee5e04edba0d5d4 422 SUPERFAMILY SSF53098 113 333 1.59E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c02820 ec43ac9cb54aeb8bcf71ec231bbf5e1b 423 Pfam PF12704 MacB-like periplasmic core domain 22 264 4.1E-32 T 12-10-2018 IPR025857 MacB-like periplasmic core domain CLSA_c02820 ec43ac9cb54aeb8bcf71ec231bbf5e1b 423 Pfam PF02687 FtsX-like permease family 329 416 1.9E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c33930 f714d45e93bed28b5ef3cebec271d496 416 SUPERFAMILY SSF48371 102 408 9.59E-6 T 12-10-2018 IPR016024 Armadillo-type fold CLSA_c33930 f714d45e93bed28b5ef3cebec271d496 416 Pfam PF04286 Protein of unknown function (DUF445) 40 412 4.5E-79 T 12-10-2018 IPR007383 Protein of unknown function DUF445 CLSA_c29970 96d4d16c341d5966cb2596585fcef92a 445 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 36 434 6.8E-79 T 12-10-2018 IPR021145 Portal protein CLSA_c17870 0b97fbf27918240142fcbb37e2f4c0c7 312 Pfam PF03547 Membrane transport protein 8 159 3.8E-18 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLSA_c17870 0b97fbf27918240142fcbb37e2f4c0c7 312 Pfam PF03547 Membrane transport protein 162 308 3.1E-15 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLSA_c17870 0b97fbf27918240142fcbb37e2f4c0c7 312 Gene3D G3DSA:1.20.1530.20 173 312 1.3E-7 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily CLSA_c33010 5839b4b79d6614b8d6fa5ec38e8447ff 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 24 33 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLSA_c33010 5839b4b79d6614b8d6fa5ec38e8447ff 68 Gene3D G3DSA:1.10.8.910 9 68 5.7E-24 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily CLSA_c33010 5839b4b79d6614b8d6fa5ec38e8447ff 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 9 68 7.7E-27 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLSA_c26960 38aa17692f1d1480057f940e11f3fb8e 65 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 65 8.8E-23 T 12-10-2018 IPR009570 Stage III sporulation protein AC CLSA_c26960 38aa17692f1d1480057f940e11f3fb8e 65 Pfam PF06686 Stage III sporulation protein AC/AD protein family 7 62 6.8E-14 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family CLSA_c37610 c7f0a4e3a2178aba76dbd05b4bb133e1 614 Pfam PF05569 BlaR1 peptidase M56 14 327 3.4E-61 T 12-10-2018 IPR008756 Peptidase M56 CLSA_c36440 bfa8b4cb6a6846817524810c5bab7fd3 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 319 2.1E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c26320 2b886722d25d303f8a2adca8acd35d4a 183 Pfam PF11167 Protein of unknown function (DUF2953) 97 147 2.5E-8 T 12-10-2018 IPR021338 Protein of unknown function DUF2953 CLSA_c24460 8e2106040241425ca215d396cfbb80ff 371 Pfam PF03600 Citrate transporter 23 303 1.8E-15 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CLSA_c08890 1f690d11bbd838ed7ba57d1f4b8fa786 342 Pfam PF13280 WYL domain 166 337 7.8E-23 T 12-10-2018 IPR026881 WYL domain CLSA_c08890 1f690d11bbd838ed7ba57d1f4b8fa786 342 ProSitePatterns PS00894 DeoR-type HTH domain signature. 26 60 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLSA_c15500 b1200f4eec1f1bd6191cf6a0b0067934 422 SUPERFAMILY SSF53098 113 333 1.52E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c15500 b1200f4eec1f1bd6191cf6a0b0067934 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c16320 c244d5d06c248dfa62bbadff7c43359e 188 Gene3D G3DSA:1.20.144.10 92 178 1.4E-17 T 12-10-2018 CLSA_c16320 c244d5d06c248dfa62bbadff7c43359e 188 SUPERFAMILY SSF48317 11 172 1.83E-33 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLSA_c16320 c244d5d06c248dfa62bbadff7c43359e 188 Pfam PF01569 PAP2 superfamily 67 168 7.6E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c16320 c244d5d06c248dfa62bbadff7c43359e 188 SMART SM00014 62 168 4.1E-21 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLSA_c29800 38b7a7e15c7ce232add79dcd3aacc74a 105 Pfam PF10844 Protein of unknown function (DUF2577) 10 103 1.7E-20 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 CLSA_c33040 fc91cb629880fb11831bc83e7a9e8c25 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 5.6E-19 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 CLSA_c28850 0a7df3dc95f79718495c57d29babdac4 476 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 31 470 1.9E-137 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CLSA_c28850 0a7df3dc95f79718495c57d29babdac4 476 PIRSF PIRSF002457 2 476 3.6E-158 T 12-10-2018 IPR030676 Citrate carrier CitT-related CLSA_c28850 0a7df3dc95f79718495c57d29babdac4 476 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 474 2.3E-161 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CLSA_c37890 efcc4b65b36d312dcd9410c2a07f191d 212 Pfam PF12706 Beta-lactamase superfamily domain 49 167 1.1E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c37890 efcc4b65b36d312dcd9410c2a07f191d 212 Gene3D G3DSA:3.60.15.10 2 212 2.5E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c37890 efcc4b65b36d312dcd9410c2a07f191d 212 SMART SM00849 21 205 0.0015 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c37890 efcc4b65b36d312dcd9410c2a07f191d 212 SUPERFAMILY SSF56281 8 177 3.52E-22 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c29790 6d731ea78246557813ac9c862de4c7d6 146 Pfam PF10934 Protein of unknown function (DUF2634) 28 128 3.2E-32 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 CLSA_c29790 6d731ea78246557813ac9c862de4c7d6 146 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 51 119 3.0E-15 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 CLSA_c16070 dbe572c4d672108fdf5cce5e6ddd70c9 102 Gene3D G3DSA:2.60.120.1460 1 97 3.1E-6 T 12-10-2018 CLSA_c35170 5dc0df357a186a7bb7b732f279f87502 249 Pfam PF14436 Bacterial EndoU nuclease 127 243 2.1E-25 T 12-10-2018 IPR029501 Bacterial EndoU nuclease CLSA_c34540 5f3329a809a2999bc07bfaf714207a26 106 Gene3D G3DSA:3.30.1460.30 4 70 4.1E-5 T 12-10-2018 CLSA_c34540 5f3329a809a2999bc07bfaf714207a26 106 SUPERFAMILY SSF159894 6 97 1.88E-18 T 12-10-2018 CLSA_c34540 5f3329a809a2999bc07bfaf714207a26 106 Pfam PF04993 TfoX N-terminal domain 13 68 1.4E-8 T 12-10-2018 IPR007076 TfoX, N-terminal CLSA_c15670 f1406effb0215b68534a9568389ac74e 189 Gene3D G3DSA:2.10.270.10 36 99 1.2E-11 T 12-10-2018 CLSA_c15670 f1406effb0215b68534a9568389ac74e 189 SUPERFAMILY SSF69360 46 101 2.09E-9 T 12-10-2018 CLSA_c15670 f1406effb0215b68534a9568389ac74e 189 Pfam PF01473 Putative cell wall binding repeat 64 80 8.3E-5 T 12-10-2018 IPR018337 Cell wall/choline-binding repeat CLSA_c42460 66bfce4918c2ce666e17b1dd25772acf 395 Pfam PF07907 YibE/F-like protein 143 383 8.8E-76 T 12-10-2018 IPR012507 YibE/F-like CLSA_c30510 2854547b9578180ee43c83cea5d81ca0 225 SUPERFAMILY SSF48537 4 168 4.41E-5 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 CLSA_c30510 2854547b9578180ee43c83cea5d81ca0 225 Pfam PF00882 Zinc dependent phospholipase C 5 164 7.6E-13 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 136 7.0E-22 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 Gene3D G3DSA:1.20.1330.10 52 225 3.3E-37 T 12-10-2018 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 187 271 3.7E-18 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 Gene3D G3DSA:1.10.8.410 226 271 1.7E-13 T 12-10-2018 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 PRINTS PR00207 Flagellin signature 109 132 1.7E-15 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 PRINTS PR00207 Flagellin signature 35 52 1.7E-15 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 PRINTS PR00207 Flagellin signature 74 93 1.7E-15 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLSA_c39450 f1d0dd03ebae3fd1ff1b339335c09a57 275 SUPERFAMILY SSF64518 1 271 6.15E-54 T 12-10-2018 CLSA_c27640 bfd21b348eab6780ad9684ce80de6411 283 Pfam PF03741 Integral membrane protein TerC family 38 239 7.5E-48 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CLSA_c27640 bfd21b348eab6780ad9684ce80de6411 283 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 271 9.4E-97 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CLSA_c16530 41aada5d45387c920b377d5ce4b111d7 245 SUPERFAMILY SSF52218 32 244 2.02E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c16530 41aada5d45387c920b377d5ce4b111d7 245 Gene3D G3DSA:3.40.50.360 30 191 1.6E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c16530 41aada5d45387c920b377d5ce4b111d7 245 Pfam PF03358 NADPH-dependent FMN reductase 32 144 2.0E-22 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLSA_c12910 3328666d8ea7c6519cc0afe9ce35ef04 169 Gene3D G3DSA:1.10.287.950 28 169 5.3E-6 T 12-10-2018 CLSA_c33580 9f43cba16359f7144acd5c0c0be779f1 256 Gene3D G3DSA:3.40.109.10 2 251 6.7E-56 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c33580 9f43cba16359f7144acd5c0c0be779f1 256 Pfam PF00881 Nitroreductase family 64 251 1.4E-20 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c33580 9f43cba16359f7144acd5c0c0be779f1 256 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 80 251 1.2E-34 T 12-10-2018 IPR020051 SagB-type dehydrogenase domain CLSA_c33580 9f43cba16359f7144acd5c0c0be779f1 256 SUPERFAMILY SSF55469 59 253 8.48E-23 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c08170 600fb1f6f9b7716b3f701850e6f1d1aa 119 Pfam PF14107 Domain of unknown function (DUF4280) 8 118 1.8E-33 T 12-10-2018 IPR025460 Protein of unknown function DUF4280 CLSA_c01350 a1df8068bc40f606f9bfc3aef8e82102 798 SMART SM00331 584 794 1.6E-25 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c01350 a1df8068bc40f606f9bfc3aef8e82102 798 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 610 793 1.3E-28 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c01350 a1df8068bc40f606f9bfc3aef8e82102 798 SUPERFAMILY SSF81606 592 791 6.15E-13 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c01350 a1df8068bc40f606f9bfc3aef8e82102 798 Gene3D G3DSA:3.60.40.10 579 796 3.8E-36 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c01350 a1df8068bc40f606f9bfc3aef8e82102 798 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 36 795 2.4E-214 T 12-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CLSA_c33090 8224e3fedf5d530acbdabb8888e518a6 67 Pfam PF07870 Protein of unknown function (DUF1657) 7 54 1.3E-16 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 CLSA_c23090 15ef234daea9615f976b4cb3f6279213 131 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 6 81 5.2E-12 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLSA_c19330 843b82fe823a85a05283fa70dac4c2c5 530 SUPERFAMILY SSF101898 277 526 6.54E-24 T 12-10-2018 CLSA_c19330 843b82fe823a85a05283fa70dac4c2c5 530 Gene3D G3DSA:2.120.10.30 258 527 1.4E-30 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CLSA_c33520 de8541f9240eeb9a21081a44f94cb3fe 374 SUPERFAMILY SSF51445 62 356 4.53E-17 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily CLSA_c33520 de8541f9240eeb9a21081a44f94cb3fe 374 Gene3D G3DSA:3.20.20.80 43 372 2.8E-55 T 12-10-2018 CLSA_c13410 dd5a52959bb0be5ac1b96833494f9b7a 267 PIRSF PIRSF018571 204 267 1.2E-9 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLSA_c13410 dd5a52959bb0be5ac1b96833494f9b7a 267 PIRSF PIRSF018571 1 209 6.3E-46 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLSA_c13410 dd5a52959bb0be5ac1b96833494f9b7a 267 Pfam PF03419 Sporulation factor SpoIIGA 3 265 1.4E-60 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLSA_c36720 d5a6b870c5ff4e39a1e9c99ae187f2e7 248 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 4 248 7.8E-70 T 12-10-2018 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 SUPERFAMILY SSF50443 321 487 2.62E-69 T 12-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 PIRSF PIRSF001478 1 488 3.9E-241 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 Pfam PF02610 L-arabinose isomerase 5 351 5.3E-171 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 Hamap MF_00519 L-arabinose isomerase [araA]. 1 468 63.792 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 SUPERFAMILY SSF53743 1 320 7.32E-119 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 298 1.0E-115 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 Pfam PF11762 L-arabinose isomerase C-terminal domain 354 467 7.5E-52 T 12-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 CLSA_c07560 86d2d05ea5b28e2ede3681282ecd846f 488 Gene3D G3DSA:3.40.50.10940 1 174 4.5E-83 T 12-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 CLSA_c09020 c625c4780c541bd7eb37352bb7217ae5 301 Pfam PF14267 Domain of unknown function (DUF4357) 252 291 1.4E-14 T 12-10-2018 IPR025579 Domain of unknown function DUF4357 CLSA_c17700 f3d482e10b2e7e160726170bc523e8e3 404 Pfam PF12791 Anti-sigma factor N-terminus 7 53 2.2E-8 T 12-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal CLSA_c33320 1423a7c726a8bfaf63a6084c0ca74239 492 Pfam PF01943 Polysaccharide biosynthesis protein 6 264 1.4E-15 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLSA_c33320 1423a7c726a8bfaf63a6084c0ca74239 492 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 467 1.1E-13 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLSA_c26900 18525152eb4f55839bb7863081d4a786 126 Pfam PF03780 Asp23 family, cell envelope-related function 11 115 1.7E-28 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 CLSA_c42780 8b013d3e789de35fe677106a0074f956 68 Gene3D G3DSA:3.30.70.100 3 66 6.3E-22 T 12-10-2018 CLSA_c42780 8b013d3e789de35fe677106a0074f956 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLSA_c42780 8b013d3e789de35fe677106a0074f956 68 SUPERFAMILY SSF55008 3 64 5.37E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CLSA_c42780 8b013d3e789de35fe677106a0074f956 68 Pfam PF00403 Heavy-metal-associated domain 6 62 2.1E-18 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLSA_c00380 23f85717c343fc2cbc3af30748b4b4ff 215 Pfam PF03006 Haemolysin-III related 4 207 5.8E-43 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CLSA_c00380 23f85717c343fc2cbc3af30748b4b4ff 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 7 214 4.6E-57 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CLSA_c21970 133aed14a0ed0f5872e8be057ae587f6 58 SUPERFAMILY SSF52540 1 53 4.21E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c21970 133aed14a0ed0f5872e8be057ae587f6 58 Gene3D G3DSA:3.40.50.300 2 53 2.9E-14 T 12-10-2018 CLSA_c36950 a9dbe259d5b13be66ddc6f8beb2f3060 167 Gene3D G3DSA:3.40.50.300 1 166 2.3E-33 T 12-10-2018 CLSA_c36950 a9dbe259d5b13be66ddc6f8beb2f3060 167 Pfam PF13238 AAA domain 5 127 4.5E-18 T 12-10-2018 CLSA_c36950 a9dbe259d5b13be66ddc6f8beb2f3060 167 SUPERFAMILY SSF52540 4 164 5.03E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25710 afb05dbed771a8aa602921a060bd0798 338 Gene3D G3DSA:3.10.120.10 17 107 2.5E-12 T 12-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily CLSA_c25710 afb05dbed771a8aa602921a060bd0798 338 SMART SM01117 25 96 1.5E-12 T 12-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain CLSA_c25710 afb05dbed771a8aa602921a060bd0798 338 SUPERFAMILY SSF55856 20 86 7.98E-15 T 12-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily CLSA_c25710 afb05dbed771a8aa602921a060bd0798 338 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 26 93 1.5E-9 T 12-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 Pfam PF00482 Type II secretion system (T2SS), protein F 67 190 5.5E-33 T 12-10-2018 IPR018076 Type II secretion system F domain CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 Pfam PF00482 Type II secretion system (T2SS), protein F 270 392 1.4E-29 T 12-10-2018 IPR018076 Type II secretion system F domain CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 Gene3D G3DSA:1.20.81.30 51 169 9.2E-35 T 12-10-2018 CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 381 400 3.1E-20 T 12-10-2018 IPR003004 GspF/PilC family CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 365 379 3.1E-20 T 12-10-2018 IPR003004 GspF/PilC family CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 3.1E-20 T 12-10-2018 IPR003004 GspF/PilC family CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 3.1E-20 T 12-10-2018 IPR003004 GspF/PilC family CLSA_c11490 c90ea9ed8eb497ed6419cdf1b863e5f8 402 Gene3D G3DSA:1.20.81.30 253 365 4.1E-29 T 12-10-2018 CLSA_c13050 b710730aeaa67e080a1b8626e325b9e0 138 Pfam PF12158 Protein of unknown function (DUF3592) 3 135 3.9E-6 T 12-10-2018 IPR021994 Protein of unknown function DUF3592 CLSA_c41900 cc55e4045815ae9b32e5811c5434c2d2 135 Pfam PF01934 Protein of unknown function DUF86 14 130 1.6E-22 T 12-10-2018 IPR008201 Protein of unknown function DUF86 CLSA_c41900 cc55e4045815ae9b32e5811c5434c2d2 135 Gene3D G3DSA:1.20.120.580 3 135 3.9E-15 T 12-10-2018 IPR037038 Bsu32300-like superfamily CLSA_c34840 0571bec155c73244ffae2dbe6ea236a5 177 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 8 168 1.2E-53 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CLSA_c34840 0571bec155c73244ffae2dbe6ea236a5 177 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 8 168 5.0E-59 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CLSA_c43550 ed2208364c2d85b8ec2bf581913f9526 150 Pfam PF04892 VanZ like family 11 136 6.3E-25 T 12-10-2018 IPR006976 VanZ-like CLSA_c43550 ed2208364c2d85b8ec2bf581913f9526 150 PIRSF PIRSF019083 1 149 8.6E-39 T 12-10-2018 IPR016747 Phosphotransbutyrylase CLSA_c27280 fe18a9e4f277503b2155b1948961717b 250 Pfam PF03799 Cell division protein FtsQ 118 238 1.5E-4 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB CLSA_c27280 fe18a9e4f277503b2155b1948961717b 250 Pfam PF08478 POTRA domain, FtsQ-type 44 109 6.5E-12 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type CLSA_c35970 d4d8a895663e5297ea5142c6a68e8b58 109 Pfam PF00893 Small Multidrug Resistance protein 4 95 5.3E-27 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CLSA_c35970 d4d8a895663e5297ea5142c6a68e8b58 109 SUPERFAMILY SSF103481 6 104 1.44E-16 T 12-10-2018 CLSA_c35970 d4d8a895663e5297ea5142c6a68e8b58 109 Gene3D G3DSA:1.10.3730.20 2 109 6.5E-34 T 12-10-2018 CLSA_c12720 1413065656d282f65ad48ffaa7701e9e 251 Pfam PF06541 Putative ABC-transporter type IV 14 167 1.6E-48 T 12-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 CLSA_c17670 c01ec08f6492e386e6537fb6a3dfa05b 168 SUPERFAMILY SSF48452 77 142 4.02E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CLSA_c17670 c01ec08f6492e386e6537fb6a3dfa05b 168 Gene3D G3DSA:1.10.287.110 1 83 3.0E-7 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c17670 c01ec08f6492e386e6537fb6a3dfa05b 168 SUPERFAMILY SSF46565 2 54 3.79E-9 T 12-10-2018 IPR036869 Chaperone J-domain superfamily CLSA_c17670 c01ec08f6492e386e6537fb6a3dfa05b 168 Pfam PF00226 DnaJ domain 2 53 3.1E-7 T 12-10-2018 IPR001623 DnaJ domain CLSA_c17670 c01ec08f6492e386e6537fb6a3dfa05b 168 SMART SM00271 1 56 3.5E-4 T 12-10-2018 IPR001623 DnaJ domain CLSA_c26240 c634c2372ea6d17593f70bcff8efafe3 495 PIRSF PIRSF006060 1 495 6.7E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c26240 c634c2372ea6d17593f70bcff8efafe3 495 Pfam PF13520 Amino acid permease 10 477 7.5E-32 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CLSA_c26240 c634c2372ea6d17593f70bcff8efafe3 495 Gene3D G3DSA:1.20.1740.10 4 492 5.8E-16 T 12-10-2018 CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 Pfam PF00082 Subtilase family 102 302 7.8E-9 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 PIRSF PIRSF037894 1 571 3.0E-239 T 12-10-2018 IPR017310 Peptidase S8A, subtilisin-related, clostridia CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 PRINTS PR00723 Subtilisin serine protease family (S8) signature 102 121 9.4E-12 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 PRINTS PR00723 Subtilisin serine protease family (S8) signature 181 194 9.4E-12 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 PRINTS PR00723 Subtilisin serine protease family (S8) signature 501 517 9.4E-12 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 SUPERFAMILY SSF52743 98 568 1.17E-39 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 Gene3D G3DSA:2.60.120.1290 297 440 2.3E-141 T 12-10-2018 CLSA_c07330 0976a3e901c0292b7cba32c00370b20a 571 Gene3D G3DSA:3.40.50.200 100 560 2.3E-141 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c18470 a84a8052fadeb2433b4c24deffff1c53 164 Gene3D G3DSA:2.10.270.10 21 163 6.6E-14 T 12-10-2018 CLSA_c18470 a84a8052fadeb2433b4c24deffff1c53 164 SUPERFAMILY SSF69360 45 163 4.91E-13 T 12-10-2018 CLSA_c35050 61b2d61aa3729526c18eb2e11ae73033 230 SUPERFAMILY SSF53335 61 219 1.41E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLSA_c35050 61b2d61aa3729526c18eb2e11ae73033 230 Pfam PF08241 Methyltransferase domain 80 187 2.5E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CLSA_c35050 61b2d61aa3729526c18eb2e11ae73033 230 Gene3D G3DSA:3.40.50.150 56 224 2.9E-29 T 12-10-2018 CLSA_c36830 34973c9d18b0aae9607e8e63cf413d2c 365 Pfam PF13407 Periplasmic binding protein domain 41 319 5.2E-50 T 12-10-2018 IPR025997 Periplasmic binding protein CLSA_c36830 34973c9d18b0aae9607e8e63cf413d2c 365 Gene3D G3DSA:3.40.50.2300 149 299 4.8E-90 T 12-10-2018 CLSA_c36830 34973c9d18b0aae9607e8e63cf413d2c 365 SUPERFAMILY SSF53822 38 330 1.38E-62 T 12-10-2018 IPR028082 Periplasmic binding protein-like I CLSA_c36830 34973c9d18b0aae9607e8e63cf413d2c 365 Gene3D G3DSA:3.40.50.2300 41 321 4.8E-90 T 12-10-2018 CLSA_c19990 d4c836ee382211cc7856d67360d7c75e 138 Pfam PF13787 Protein of unknown function with HXXEE motif 17 85 1.0E-9 T 12-10-2018 IPR025671 Protein of unknown function with HXXEE motif CLSA_c21240 55c7a5ab9b0b68273d36e6d31721ebc0 249 Pfam PF12730 ABC-2 family transporter protein 5 178 8.6E-17 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c45120 07d08deca04a42968b2096d98b571f1f 158 SUPERFAMILY SSF101386 2 149 6.47E-13 T 12-10-2018 CLSA_c45120 07d08deca04a42968b2096d98b571f1f 158 Pfam PF08761 dUTPase 3 149 2.0E-13 T 12-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 CLSA_c45120 07d08deca04a42968b2096d98b571f1f 158 PIRSF PIRSF030140 1 153 4.9E-27 T 12-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 CLSA_c25880 f9924da36dab51c213bde3e8dce36579 439 SMART SM00382 243 359 0.005 T 12-10-2018 IPR003593 AAA+ ATPase domain CLSA_c25880 f9924da36dab51c213bde3e8dce36579 439 Gene3D G3DSA:3.40.50.300 203 396 2.8E-15 T 12-10-2018 CLSA_c25880 f9924da36dab51c213bde3e8dce36579 439 SUPERFAMILY SSF52540 123 349 4.06E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c25880 f9924da36dab51c213bde3e8dce36579 439 Pfam PF05673 Protein of unknown function (DUF815) 193 437 2.5E-100 T 12-10-2018 IPR008533 Domain of unknown function DUF815 CLSA_c39060 f9f9b8684dcd450818c5490a59c189fd 80 TIGRFAM TIGR04540 CLB_0814_fam: conserved hypothetical protein 2 74 1.5E-28 T 12-10-2018 IPR030902 Conserved hypothetical protein CLSA_c38420 3934c943a8b1e0a45fcc5a9a0eb914cf 486 Pfam PF03611 PTS system sugar-specific permease component 14 421 1.2E-121 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CLSA_c12350 93e77782274aea64feaf83bc194ea3e7 411 Pfam PF04932 O-Antigen ligase 203 337 1.6E-11 T 12-10-2018 IPR007016 O-antigen ligase-related CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 SUPERFAMILY SSF144052 2 408 3.27E-142 T 12-10-2018 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 Pfam PF02073 Thermophilic metalloprotease (M29) 4 407 8.6E-173 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 Gene3D G3DSA:3.40.1830.10 1 178 2.3E-64 T 12-10-2018 IPR035097 Peptidase M29, N-terminal CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 13 30 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 154 176 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c11740 59c1ee8feab312a7f10671d7a74ae906 408 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 78 97 2.9E-59 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 CLSA_c42690 3c9fde415c045db1354d39922d387f4f 72 Pfam PF11213 Protein of unknown function (DUF3006) 5 71 1.2E-18 T 12-10-2018 IPR021377 Protein of unknown function DUF3006 CLSA_c10950 271d6b427f919de4d82129556fde6fc4 92 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 91 3.9E-29 T 12-10-2018 IPR022477 Sporulation protein YqfC CLSA_c10950 271d6b427f919de4d82129556fde6fc4 92 Pfam PF07873 YabP family 27 90 6.8E-15 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC CLSA_c44060 0faa303d2c84e999999f8b41a452632f 89 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 11 88 9.2E-20 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA CLSA_c05560 6694f715a09a1783d72757ece3739cc7 136 PIRSF PIRSF004923 1 136 9.5E-28 T 12-10-2018 IPR026268 Protein RseC CLSA_c05560 6694f715a09a1783d72757ece3739cc7 136 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 134 5.3E-28 T 12-10-2018 CLSA_c07610 c415327961e4809f25c7f500247f059b 534 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 18 244 2.2E-21 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLSA_c07610 c415327961e4809f25c7f500247f059b 534 Gene3D G3DSA:3.30.420.40 266 529 5.5E-16 T 12-10-2018 CLSA_c07610 c415327961e4809f25c7f500247f059b 534 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 475 8.3E-30 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLSA_c07610 c415327961e4809f25c7f500247f059b 534 Gene3D G3DSA:3.30.420.40 13 265 2.8E-40 T 12-10-2018 CLSA_c07610 c415327961e4809f25c7f500247f059b 534 SUPERFAMILY SSF53067 17 263 1.08E-32 T 12-10-2018 CLSA_c07610 c415327961e4809f25c7f500247f059b 534 SUPERFAMILY SSF53067 274 521 1.17E-13 T 12-10-2018 CLSA_c28450 dacba2148789d1650b7dcb441e653fab 220 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 14 215 1.5E-63 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CLSA_c28450 dacba2148789d1650b7dcb441e653fab 220 Gene3D G3DSA:3.40.50.300 1 220 3.5E-72 T 12-10-2018 CLSA_c28450 dacba2148789d1650b7dcb441e653fab 220 SUPERFAMILY SSF52540 33 210 3.31E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c28450 dacba2148789d1650b7dcb441e653fab 220 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 34 202 4.0E-14 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CLSA_c35290 116bcbaa18465ed984019ed19fb126fa 156 Pfam PF16219 Domain of unknown function (DUF4879) 42 150 1.2E-12 T 12-10-2018 IPR032624 Protein of unknown function DUF4879 CLSA_c36980 57b0d3a3a4aa8b6d30c8002582ccd022 242 Pfam PF01061 ABC-2 type transporter 4 204 3.8E-9 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLSA_c30830 424800fb80274dca32a351f05839cf76 649 Pfam PF01496 V-type ATPase 116kDa subunit family 38 423 4.5E-16 T 12-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c30830 424800fb80274dca32a351f05839cf76 649 Pfam PF01496 V-type ATPase 116kDa subunit family 551 638 4.3E-10 T 12-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CLSA_c36010 019d2f57e612ee0ba2aef2a347f8c77d 46 SUPERFAMILY SSF102198 2 45 1.44E-7 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c36010 019d2f57e612ee0ba2aef2a347f8c77d 46 Gene3D G3DSA:3.50.30.50 1 46 2.7E-5 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CLSA_c15570 026e9805a4f826fd194eadbac5adcbaf 276 Gene3D G3DSA:3.30.2010.10 175 271 2.5E-20 T 12-10-2018 CLSA_c15570 026e9805a4f826fd194eadbac5adcbaf 276 Pfam PF01863 Protein of unknown function DUF45 152 268 6.1E-39 T 12-10-2018 IPR002725 Protein of unknown function DUF45 CLSA_c15570 026e9805a4f826fd194eadbac5adcbaf 276 Pfam PF01863 Protein of unknown function DUF45 22 102 1.8E-12 T 12-10-2018 IPR002725 Protein of unknown function DUF45 CLSA_c24980 582521515f8eedf86e5368d294aaa563 325 Pfam PF05107 CRISPR-associated protein Cas7 3 273 1.2E-45 T 12-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C CLSA_c19810 705b270f933b0f3bc9d7b5c4df1eb5e3 188 Pfam PF13021 Domain of unknown function (DUF3885) 158 179 4.7E-5 T 12-10-2018 IPR024976 Domain of unknown function DUF3885 CLSA_c42000 d1dca8a017717eada33c8894b71c8139 508 Pfam PF14264 Glucosyl transferase GtrII 37 349 3.5E-39 T 12-10-2018 IPR025686 Glucosyl transferase II CLSA_c29150 a949ab5d0b460e1fa1d263b9d832bf26 238 SUPERFAMILY SSF46785 12 76 8.29E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c29150 a949ab5d0b460e1fa1d263b9d832bf26 238 Gene3D G3DSA:1.10.10.10 8 92 4.7E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c41910 973407c603cd834dcc4aaedb785ebff7 147 Gene3D G3DSA:3.30.460.10 2 110 9.0E-18 T 12-10-2018 CLSA_c41910 973407c603cd834dcc4aaedb785ebff7 147 SUPERFAMILY SSF81301 13 112 5.73E-15 T 12-10-2018 CLSA_c41910 973407c603cd834dcc4aaedb785ebff7 147 Pfam PF01909 Nucleotidyltransferase domain 15 80 9.9E-9 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLSA_c43950 492c316bdbc71d17b347cd63c4895f5d 206 SUPERFAMILY SSF46689 4 73 5.03E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CLSA_c43950 492c316bdbc71d17b347cd63c4895f5d 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 55 5.0E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLSA_c43950 492c316bdbc71d17b347cd63c4895f5d 206 Gene3D G3DSA:1.10.357.10 1 191 9.1E-16 T 12-10-2018 CLSA_c07520 97c3f535b0cac2608c7214988b0994eb 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 315 4.2E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c06640 817b08d9fa01a322414d7c3799f1f982 432 SUPERFAMILY SSF53300 236 406 6.27E-10 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily CLSA_c06640 817b08d9fa01a322414d7c3799f1f982 432 Pfam PF10138 vWA found in TerF C terminus 234 430 6.2E-72 T 12-10-2018 IPR019303 vWA found in TerF C terminus CLSA_c06640 817b08d9fa01a322414d7c3799f1f982 432 Gene3D G3DSA:2.60.60.30 16 165 1.1E-26 T 12-10-2018 CLSA_c06640 817b08d9fa01a322414d7c3799f1f982 432 Pfam PF02342 TerD domain 2 167 1.8E-30 T 12-10-2018 IPR003325 TerD domain CLSA_c33890 2ce6bc18655abe8b520ba4bd355e1f5b 106 SUPERFAMILY SSF54637 17 81 6.25E-5 T 12-10-2018 IPR029069 HotDog domain superfamily CLSA_c03720 286469d12799ef8a7e0b8424d5dcd01a 146 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 15 142 6.5E-41 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 CLSA_c03720 286469d12799ef8a7e0b8424d5dcd01a 146 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 144 25.697 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 CLSA_c24970 ea720039a717260099ced2683a62bcf2 266 TIGRFAM TIGR02592 cas_Cas5h: CRISPR-associated protein Cas5, subtype I-B/HMARI 2 265 4.6E-60 T 12-10-2018 IPR013421 CRISPR-associated protein Cas5, HALMA CLSA_c24970 ea720039a717260099ced2683a62bcf2 266 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 46 4.9E-7 T 12-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal CLSA_c31690 902ace671b85917723ce7a2dd5099554 227 SUPERFAMILY SSF51735 25 112 9.85E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily CLSA_c31690 902ace671b85917723ce7a2dd5099554 227 Pfam PF13241 Putative NAD(P)-binding 25 114 6.7E-11 T 12-10-2018 CLSA_c31690 902ace671b85917723ce7a2dd5099554 227 Gene3D G3DSA:3.40.50.720 20 145 3.0E-13 T 12-10-2018 CLSA_c36640 16d0cc3392db7f4e1d51e31dcb75e4f3 488 Gene3D G3DSA:3.55.50.10 111 170 5.5E-8 T 12-10-2018 CLSA_c36640 16d0cc3392db7f4e1d51e31dcb75e4f3 488 SUPERFAMILY SSF69279 41 182 5.95E-19 T 12-10-2018 CLSA_c42740 ca7a0bf41526e340a05601e6a18cd9f7 170 Pfam PF06541 Putative ABC-transporter type IV 10 161 2.8E-37 T 12-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 CLSA_c29980 8dcd6224c68df0fae9de3eacd9512e6b 608 Gene3D G3DSA:3.40.50.300 83 259 3.4E-9 T 12-10-2018 CLSA_c09310 cef2ce1a769f41e851204fbd3907bcd5 390 Pfam PF13280 WYL domain 247 381 2.0E-6 T 12-10-2018 IPR026881 WYL domain CLSA_c18480 4b8af50b8e2a4bd9e276a7e7c93c07c7 299 Pfam PF00753 Metallo-beta-lactamase superfamily 43 234 8.7E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c18480 4b8af50b8e2a4bd9e276a7e7c93c07c7 299 SMART SM00849 45 236 5.3E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase CLSA_c18480 4b8af50b8e2a4bd9e276a7e7c93c07c7 299 Gene3D G3DSA:3.60.15.10 33 279 3.2E-78 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c18480 4b8af50b8e2a4bd9e276a7e7c93c07c7 299 SUPERFAMILY SSF56281 33 278 2.88E-62 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLSA_c15030 0168b2692aa1959d9fa1937ddba77968 110 Gene3D G3DSA:1.10.10.10 12 110 6.6E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c15030 0168b2692aa1959d9fa1937ddba77968 110 Pfam PF01638 HxlR-like helix-turn-helix 21 108 1.1E-30 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type CLSA_c15030 0168b2692aa1959d9fa1937ddba77968 110 SUPERFAMILY SSF46785 12 107 1.34E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c04200 cad8b1447e60f5189180093b7e382058 72 Pfam PF11148 Protein of unknown function (DUF2922) 4 69 5.9E-23 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 CLSA_c18830 b74174f973beb2b19aa66128dae657ab 269 Pfam PF03618 Kinase/pyrophosphorylase 4 260 3.0E-85 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CLSA_c18830 b74174f973beb2b19aa66128dae657ab 269 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 2 265 50.866 T 12-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CLSA_c04540 7a3d6fd8c655d89ed9da9c16086361b2 49 Gene3D G3DSA:3.20.80.10 1 49 2.3E-5 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c04540 7a3d6fd8c655d89ed9da9c16086361b2 49 SUPERFAMILY SSF55136 2 48 5.58E-10 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c07960 bb76e73e597fc622df86d043c637846e 110 SUPERFAMILY SSF47823 11 90 1.29E-7 T 12-10-2018 CLSA_c07960 bb76e73e597fc622df86d043c637846e 110 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 5 89 2.2E-10 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLSA_c07960 bb76e73e597fc622df86d043c637846e 110 Gene3D G3DSA:1.10.150.130 1 103 4.4E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal CLSA_c29170 9b4822ddda942a50291afd1008e0f648 249 Pfam PF12640 UPF0489 domain 58 159 7.6E-16 T 12-10-2018 IPR024131 Uncharacterised protein family UPF0489 CLSA_c12330 bc75640cdd48b142eaa01aaa03d32fce 435 SUPERFAMILY SSF53756 110 304 4.16E-13 T 12-10-2018 CLSA_c06620 54098878138f242b8d2b2394f3851e66 198 Pfam PF02342 TerD domain 1 122 3.1E-10 T 12-10-2018 IPR003325 TerD domain CLSA_c07720 d5b1e7f250d825c6ce8345b955914052 112 Pfam PF13031 Protein of unknown function (DUF3892) 42 108 1.0E-16 T 12-10-2018 IPR024997 Protein of unknown function DUF3892 CLSA_c29770 969def08cc9d93600d646e23667df9b5 203 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 4 140 9.6E-37 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 CLSA_c16890 c946c8d02746ddc4c36b8c83b0928129 79 Pfam PF14501 GHKL domain 1 63 2.7E-7 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLSA_c19220 2166b67626b57690710942ade997933e 102 SUPERFAMILY SSF101386 32 89 5.23E-7 T 12-10-2018 CLSA_c28520 f1b215407dfe1226e294c7e94a7d8fde 376 Pfam PF04230 Polysaccharide pyruvyl transferase 14 308 9.3E-32 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase CLSA_c19550 f4d61bb830aedc97f159e09aa860c8cf 78 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 7 73 3.8E-21 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 CLSA_c10710 d455481f498531cb3bcd85ccf3317afa 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 3.3E-46 T 12-10-2018 IPR014204 Sporulation stage V, protein AE CLSA_c10710 d455481f498531cb3bcd85ccf3317afa 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 2 111 6.2E-37 T 12-10-2018 IPR005562 SpoVA CLSA_c27780 525cc73dc976779df1e07f912fdd8970 343 SUPERFAMILY SSF101898 69 315 3.66E-6 T 12-10-2018 CLSA_c27780 525cc73dc976779df1e07f912fdd8970 343 Gene3D G3DSA:2.120.10.30 25 339 6.9E-7 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CLSA_c34200 83471e18f27ed7f05b0c18c8564bc7be 289 Gene3D G3DSA:3.40.50.1820 4 287 1.2E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c34200 83471e18f27ed7f05b0c18c8564bc7be 289 Pfam PF07859 alpha/beta hydrolase fold 59 263 7.7E-56 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CLSA_c34200 83471e18f27ed7f05b0c18c8564bc7be 289 SUPERFAMILY SSF53474 30 287 5.92E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold CLSA_c31930 879707326a5779ea556a8661d77d1b0e 208 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 3 205 1.8E-51 T 12-10-2018 IPR014205 Sporulation protein YtaF CLSA_c31930 879707326a5779ea556a8661d77d1b0e 208 Pfam PF02659 Putative manganese efflux pump 66 203 2.8E-11 T 12-10-2018 IPR003810 Putative manganese efflux pump CLSA_c42840 d23f79d977d7b78549491afe1398a2bc 344 Pfam PF02517 CAAX protease self-immunity 167 251 9.5E-21 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CLSA_c17520 21c57a1d9ea318874af57e5b5b91dece 309 SUPERFAMILY SSF103481 41 142 9.68E-11 T 12-10-2018 CLSA_c17520 21c57a1d9ea318874af57e5b5b91dece 309 Pfam PF00892 EamA-like transporter family 10 140 1.4E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c17520 21c57a1d9ea318874af57e5b5b91dece 309 Pfam PF00892 EamA-like transporter family 151 286 3.1E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c17520 21c57a1d9ea318874af57e5b5b91dece 309 SUPERFAMILY SSF103481 187 286 1.31E-10 T 12-10-2018 CLSA_c13770 4b1f7a606b0ba2e4eaf827976c2361ed 116 Pfam PF03780 Asp23 family, cell envelope-related function 8 115 1.2E-33 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 CLSA_c31080 a6ce61e992b627ebf1bb8d44e83b59a1 500 Gene3D G3DSA:2.160.20.20 67 491 2.0E-16 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily CLSA_c37740 ec6768e97d1f6fb512253123dffde58a 110 Gene3D G3DSA:1.20.1440.140 1 91 8.7E-36 T 12-10-2018 CLSA_c37740 ec6768e97d1f6fb512253123dffde58a 110 Pfam PF08951 Enterocin A Immunity 11 85 2.3E-14 T 12-10-2018 IPR015046 Enterocin A Immunity CLSA_c35410 e339fdd30649e98cdab23e1ea97af254 365 Pfam PF04865 Baseplate J-like protein 70 324 2.5E-64 T 12-10-2018 IPR006949 Baseplate protein J-like CLSA_c03420 3ff4bc809ece1ae4fa5330bd99b273f9 342 SUPERFAMILY SSF50998 118 326 3.92E-6 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLSA_c12210 e8fcf1e1b7ec4d622e8bfc6a9b184720 785 Pfam PF12392 Collagenase 376 489 2.3E-21 T 12-10-2018 IPR020988 Peptidase U32, collagenase CLSA_c12210 e8fcf1e1b7ec4d622e8bfc6a9b184720 785 Pfam PF01136 Peptidase family U32 593 753 1.3E-14 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c12210 e8fcf1e1b7ec4d622e8bfc6a9b184720 785 Pfam PF01136 Peptidase family U32 76 295 7.9E-79 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c12210 e8fcf1e1b7ec4d622e8bfc6a9b184720 785 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLSA_c29650 2a20db6a899da120ea716ba59cd365be 214 Gene3D G3DSA:1.10.10.10 1 88 3.6E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c06610 6a311ffe82a06ffbc3183b36d48ce567 240 Pfam PF03741 Integral membrane protein TerC family 33 202 1.3E-51 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CLSA_c06610 6a311ffe82a06ffbc3183b36d48ce567 240 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 30 229 3.1E-73 T 12-10-2018 IPR022493 Integral membrane YkoY CLSA_c39400 068fd1a2cd58b56ec48eea8ffba0a2cf 684 SUPERFAMILY SSF52540 58 301 8.8E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLSA_c39400 068fd1a2cd58b56ec48eea8ffba0a2cf 684 Pfam PF00350 Dynamin family 61 260 8.1E-17 T 12-10-2018 IPR022812 Dynamin superfamily CLSA_c24490 bb4e19372fc72652ff8ac303ab2df7ce 258 Pfam PF12730 ABC-2 family transporter protein 6 158 6.5E-8 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c24490 bb4e19372fc72652ff8ac303ab2df7ce 258 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 5 255 1.5E-88 T 12-10-2018 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family CLSA_c25100 cfa677ae8ad538e9e29cad3685f16040 83 SUPERFAMILY SSF50118 6 75 2.4E-6 T 12-10-2018 CLSA_c25100 cfa677ae8ad538e9e29cad3685f16040 83 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 64 1.1E-5 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CLSA_c39130 b7120e4cdd3576ccb8a9d85539ea1eca 259 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 134 3.1E-32 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLSA_c39130 b7120e4cdd3576ccb8a9d85539ea1eca 259 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 190 257 3.0E-13 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLSA_c39130 b7120e4cdd3576ccb8a9d85539ea1eca 259 SUPERFAMILY SSF117143 88 219 2.75E-19 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLSA_c26730 e258944700d3d850e58a80a323811c17 148 Pfam PF14319 Transposase zinc-binding domain 9 113 5.4E-33 T 12-10-2018 IPR026889 Transposase zinc-binding domain CLSA_c43690 ce05686b7b4f991b765a5a39de1f31c6 249 Pfam PF01252 Signal peptidase (SPase) II 72 210 5.0E-16 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CLSA_c05480 db178f0585abdec4b33dcbd86cab1e58 230 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 10 152 6.2E-36 T 12-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase CLSA_c09530 60e583cbff3b5daed56789068b59c29d 337 SUPERFAMILY SSF56235 6 322 6.4E-96 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CLSA_c09530 60e583cbff3b5daed56789068b59c29d 337 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 6 320 1.0E-88 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CLSA_c09530 60e583cbff3b5daed56789068b59c29d 337 Gene3D G3DSA:3.60.60.10 6 336 5.5E-102 T 12-10-2018 CLSA_c45150 34eaa19f29be55aa892498f4b20fdd10 399 PRINTS PR00723 Subtilisin serine protease family (S8) signature 148 161 1.3E-9 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c45150 34eaa19f29be55aa892498f4b20fdd10 399 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 127 1.3E-9 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c45150 34eaa19f29be55aa892498f4b20fdd10 399 PRINTS PR00723 Subtilisin serine protease family (S8) signature 340 356 1.3E-9 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related CLSA_c45150 34eaa19f29be55aa892498f4b20fdd10 399 Gene3D G3DSA:3.40.50.200 90 398 1.5E-47 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c45150 34eaa19f29be55aa892498f4b20fdd10 399 SUPERFAMILY SSF52743 105 398 1.96E-49 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 CLSA_c45150 34eaa19f29be55aa892498f4b20fdd10 399 Pfam PF00082 Subtilase family 108 390 5.5E-19 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLSA_c33510 33350d33597c1c4dd53e737a3a6c1f5d 204 Pfam PF02659 Putative manganese efflux pump 66 199 1.2E-6 T 12-10-2018 IPR003810 Putative manganese efflux pump CLSA_c18590 88a95e53ea20dc76d3937c74f9f96a0c 672 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 172 2.0E-44 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal CLSA_c18590 88a95e53ea20dc76d3937c74f9f96a0c 672 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 463 665 1.9E-43 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal CLSA_c18590 88a95e53ea20dc76d3937c74f9f96a0c 672 Pfam PF12698 ABC-2 family transporter protein 518 660 7.4E-10 T 12-10-2018 CLSA_c22530 31e005fbb57f5450651da906328c93c1 175 Gene3D G3DSA:2.60.40.730 22 137 7.1E-11 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 CLSA_c19660 bcdb569a34934532a822568f0d9d948a 315 Gene3D G3DSA:3.40.190.10 136 241 4.3E-48 T 12-10-2018 CLSA_c19660 bcdb569a34934532a822568f0d9d948a 315 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 276 1.6E-49 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c19660 bcdb569a34934532a822568f0d9d948a 315 Gene3D G3DSA:3.40.190.10 48 275 4.3E-48 T 12-10-2018 CLSA_c19660 bcdb569a34934532a822568f0d9d948a 315 SUPERFAMILY SSF53850 1 279 5.61E-49 T 12-10-2018 CLSA_c19660 bcdb569a34934532a822568f0d9d948a 315 SMART SM00062 50 279 2.9E-41 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLSA_c18290 7ec84ab9ea064fe1f7b553f69706ebd5 262 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 2 256 6.5E-113 T 12-10-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CLSA_c34710 3ac39b6398818900877bd16af575704e 222 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 78 216 1.4E-19 T 12-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase CLSA_c20670 a77423440e553de4838c272531dd641a 273 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 272 4.3E-107 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CLSA_c20670 a77423440e553de4838c272531dd641a 273 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 272 6.3E-125 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CLSA_c24130 54993ff09b64471301c20c816719f904 350 SUPERFAMILY SSF53850 37 346 3.71E-39 T 12-10-2018 CLSA_c24130 54993ff09b64471301c20c816719f904 350 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 41 342 1.7E-53 T 12-10-2018 CLSA_c24130 54993ff09b64471301c20c816719f904 350 Gene3D G3DSA:3.40.190.10 26 153 5.8E-12 T 12-10-2018 CLSA_c24130 54993ff09b64471301c20c816719f904 350 Gene3D G3DSA:3.40.190.10 154 317 3.3E-5 T 12-10-2018 CLSA_c00670 4e354f26092c1f75c4a807bf824d552b 191 Pfam PF07670 Nucleoside recognition 43 148 3.3E-12 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLSA_c19880 40b7a3f87c4504f8c501432a953f3cc2 341 Pfam PF13786 Domain of unknown function (DUF4179) 39 124 3.1E-11 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 CLSA_c03890 e711dc397607825f0be35523402ce022 591 SUPERFAMILY SSF48208 178 315 1.19E-5 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CLSA_c32900 7ab86e5e0c372266b6c6c30121c092cb 163 Gene3D G3DSA:2.40.50.140 96 163 6.9E-10 T 12-10-2018 CLSA_c32900 7ab86e5e0c372266b6c6c30121c092cb 163 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 162 4.5E-17 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain CLSA_c32900 7ab86e5e0c372266b6c6c30121c092cb 163 SUPERFAMILY SSF141322 98 163 1.96E-7 T 12-10-2018 CLSA_c09230 be6c78bb56f46d156c2743da5f53178f 137 Pfam PF08011 PD-(D/E)XK nuclease superfamily 40 125 1.4E-12 T 12-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 CLSA_c30380 8b562631cc25a3a77061ee44ed03f286 308 SUPERFAMILY SSF103481 204 291 4.71E-10 T 12-10-2018 CLSA_c30380 8b562631cc25a3a77061ee44ed03f286 308 SUPERFAMILY SSF103481 49 152 3.27E-13 T 12-10-2018 CLSA_c30380 8b562631cc25a3a77061ee44ed03f286 308 Pfam PF00892 EamA-like transporter family 163 290 5.7E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c30380 8b562631cc25a3a77061ee44ed03f286 308 Pfam PF00892 EamA-like transporter family 17 150 8.7E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CLSA_c17070 dd9678061a36b0738429def80deacfd9 96 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 89 1.2E-31 T 12-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 CLSA_c38040 afe5646608f1fa970c67870533244dd2 820 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 429 819 1.2E-38 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CLSA_c38040 afe5646608f1fa970c67870533244dd2 820 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 20 401 2.2E-11 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CLSA_c38040 afe5646608f1fa970c67870533244dd2 820 SUPERFAMILY SSF56059 427 818 5.55E-34 T 12-10-2018 CLSA_c38040 afe5646608f1fa970c67870533244dd2 820 SUPERFAMILY SSF56059 15 401 1.18E-25 T 12-10-2018 CLSA_c00370 cc17ed017bb114be76394e638a0d4811 197 Pfam PF08876 Domain of unknown function (DUF1836) 20 125 1.2E-32 T 12-10-2018 IPR014975 Protein of unknown function DUF1836 CLSA_c11870 084b0e859d2b7e827a82e4b646e85527 242 Pfam PF13391 HNH endonuclease 151 197 2.7E-6 T 12-10-2018 IPR003615 HNH nuclease CLSA_c38290 372704ea0ca2ee9a2336d434955a5af1 370 Pfam PF12671 Putative amidase domain 206 366 8.3E-46 T 12-10-2018 IPR024301 Putative amidase domain CLSA_c37400 4cd8e8648cdc10e5808807f612c317d6 225 Pfam PF17118 Domain of unknown function (DUF5105) 40 208 4.2E-12 T 12-10-2018 IPR031343 Domain of unknown function DUF5105 CLSA_c23770 ed5bc2e5311229948cd576221f9f2ca2 334 Pfam PF01384 Phosphate transporter family 22 323 7.5E-86 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CLSA_c39890 d4e77fb1b447c3a5ce57ec4a3962d8c2 125 Pfam PF06949 Protein of unknown function (DUF1292) 61 119 3.0E-9 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 CLSA_c34070 a82c9d1499c55688ef0696d14a9a50ba 94 SUPERFAMILY SSF54909 1 84 8.04E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel CLSA_c34070 a82c9d1499c55688ef0696d14a9a50ba 94 Pfam PF03795 YCII-related domain 1 81 1.5E-12 T 12-10-2018 IPR005545 YCII-related CLSA_c35550 4b3cbf664b2cc14019151b4658972c43 349 Gene3D G3DSA:3.15.30.10 131 293 4.0E-13 T 12-10-2018 CLSA_c35550 4b3cbf664b2cc14019151b4658972c43 349 Pfam PF03864 Phage major capsid protein E 15 347 1.7E-34 T 12-10-2018 IPR005564 Major capsid protein GpE CLSA_c35550 4b3cbf664b2cc14019151b4658972c43 349 Gene3D G3DSA:3.30.1930.10 156 281 4.0E-13 T 12-10-2018 CLSA_c28140 949f3485384c59256d90034a9dcb7cdd 178 PIRSF PIRSF016661 1 177 3.6E-34 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLSA_c28140 949f3485384c59256d90034a9dcb7cdd 178 Pfam PF02632 BioY family 28 168 4.3E-32 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLSA_c28140 949f3485384c59256d90034a9dcb7cdd 178 Gene3D G3DSA:1.10.1760.20 1 176 5.4E-44 T 12-10-2018 CLSA_c10000 a490b06302682601b5714ebb1961aab6 676 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 67 225 1.6E-41 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CLSA_c01150 95150fd1e14fb0f3f10620fe9b6f547e 173 Gene3D G3DSA:2.40.30.170 52 162 9.1E-6 T 12-10-2018 CLSA_c22990 d90a5acd63913f9a63d9e5193b8c4584 152 Pfam PF10934 Protein of unknown function (DUF2634) 34 135 2.4E-25 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 CLSA_c22990 d90a5acd63913f9a63d9e5193b8c4584 152 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 54 142 8.0E-7 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 CLSA_c06550 fa2b95bc024c5b4ed2a83fab60c98577 91 Pfam PF05598 Transposase domain (DUF772) 54 84 3.6E-6 T 12-10-2018 IPR008490 Transposase InsH, N-terminal CLSA_c38750 1e89b316a9d414b6806e48612c5effdd 49 Pfam PF13451 Probable zinc-ribbon domain 2 48 2.8E-26 T 12-10-2018 IPR025306 Probable zinc-binding domain CLSA_c28940 38863aab36d3fdd95953dfae101c2c79 75 Gene3D G3DSA:1.20.1260.10 1 75 4.3E-7 T 12-10-2018 IPR012347 Ferritin-like CLSA_c38080 fb1d376b9b56ab126a45ce5c71a4475e 253 Pfam PF02698 DUF218 domain 94 226 5.8E-23 T 12-10-2018 IPR003848 Domain of unknown function DUF218 CLSA_c39000 4e9d2b9bebf8403d534467228f67b5b6 54 Pfam PF12669 Virus attachment protein p12 family 3 47 2.3E-13 T 12-10-2018 CLSA_c43160 db517aa2ba38fd3fed089ce8a6d26fbd 209 PIRSF PIRSF033729 7 209 2.2E-34 T 12-10-2018 IPR014584 Uncharacterised conserved protein UCP033729 CLSA_c11520 91321e2b519cdd755d5242ac2398e4a7 185 Pfam PF05137 Fimbrial assembly protein (PilN) 106 180 7.6E-11 T 12-10-2018 IPR007813 Fimbrial assembly PilN CLSA_c29180 db277b5398c3d4276c8216f8b5838590 205 Pfam PF12952 Domain of unknown function (DUF3841) 3 197 1.5E-46 T 12-10-2018 IPR024211 Protein of unknown function DUF3841 CLSA_c24610 1b8ec30b5e7fdfa0240b4a6e0bed796c 264 Pfam PF13289 SIR2-like domain 101 243 2.6E-27 T 12-10-2018 IPR039444 SIR2-like domain CLSA_c24610 1b8ec30b5e7fdfa0240b4a6e0bed796c 264 SUPERFAMILY SSF52467 2 205 1.07E-14 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLSA_c24610 1b8ec30b5e7fdfa0240b4a6e0bed796c 264 PIRSF PIRSF033541 1 262 5.6E-107 T 12-10-2018 IPR014583 Uncharacterised protein family, Sir2-like CLSA_c26870 74aadd34ad250f8dbed7f0639036ea19 402 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 393 3.7E-143 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CLSA_c26870 74aadd34ad250f8dbed7f0639036ea19 402 Pfam PF02601 Exonuclease VII, large subunit 331 392 1.8E-8 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CLSA_c26870 74aadd34ad250f8dbed7f0639036ea19 402 Pfam PF02601 Exonuclease VII, large subunit 124 344 3.2E-75 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CLSA_c26870 74aadd34ad250f8dbed7f0639036ea19 402 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 396 26.377 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CLSA_c26870 74aadd34ad250f8dbed7f0639036ea19 402 Pfam PF13742 OB-fold nucleic acid binding domain 6 100 2.6E-29 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CLSA_c44560 e63de6369f9f3dc62e4ca825c8b11658 422 Pfam PF01609 Transposase DDE domain 117 322 3.0E-22 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLSA_c44560 e63de6369f9f3dc62e4ca825c8b11658 422 SUPERFAMILY SSF53098 105 333 9.86E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c11680 3faeba2c32a54ce0979ef0b00d87d10d 428 Pfam PF02447 GntP family permease 9 424 4.9E-30 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLSA_c04230 b8250008509203e5c082399534b33095 377 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 24 320 8.9E-62 T 12-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CLSA_c20740 69e62c892754fdd883cdc1087be3fadc 633 Pfam PF13515 Fusaric acid resistance protein-like 348 472 2.1E-24 T 12-10-2018 CLSA_c05440 eef8245e1cae444d43631bae0c112176 281 Pfam PF02517 CAAX protease self-immunity 140 226 9.6E-11 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CLSA_c28740 650b025ea77d17b2531dbfe623ceafbc 122 Pfam PF12670 Protein of unknown function (DUF3792) 7 119 4.6E-21 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane CLSA_c28740 650b025ea77d17b2531dbfe623ceafbc 122 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 9 122 3.1E-26 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane CLSA_c29890 80cd0e6bb2f78ad281c81dd7dc4a9cb2 123 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 8 84 1.6E-12 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLSA_c33030 7a5a92c221e6ae8cfc1ef87a5f62506f 121 Pfam PF14276 Domain of unknown function (DUF4363) 13 114 4.1E-14 T 12-10-2018 IPR025373 Protein of unknown function DUF4363 CLSA_c39250 fceac2fcafc044a3562ce6580d823e50 132 Pfam PF04347 Flagellar biosynthesis protein, FliO 32 97 4.3E-6 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CLSA_c12030 29ed06f36459df5a085d1b72a10882e4 140 Pfam PF03788 LrgA family 14 106 3.7E-33 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 CLSA_c32210 ac3a631a8582419cbba4c96cd27046b3 323 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 16 258 8.0E-42 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c32210 ac3a631a8582419cbba4c96cd27046b3 323 Pfam PF03812 2-keto-3-deoxygluconate permease 5 307 2.0E-114 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLSA_c23000 3b86b10f4e1578f7af8882c246fdd774 117 Pfam PF10844 Protein of unknown function (DUF2577) 24 109 1.5E-10 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 CLSA_c07890 8dbf640c90064fcc7a4320ca05d90cb0 91 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 21 52 1.1E-6 T 12-10-2018 IPR006530 YD repeat CLSA_c36710 3d3a965a24ca95a54f367d54719559b0 233 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 1 231 1.8E-62 T 12-10-2018 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family CLSA_c27200 9842e601776fa6573cf6336b9b2603b7 208 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 34 2.0E-16 T 12-10-2018 IPR019933 DivIVA domain CLSA_c27200 9842e601776fa6573cf6336b9b2603b7 208 Pfam PF05103 DivIVA protein 3 133 5.2E-46 T 12-10-2018 IPR007793 DivIVA family CLSA_c29780 7c1fae5a2416425faca8f258b26cd633 362 Pfam PF04865 Baseplate J-like protein 69 323 3.6E-63 T 12-10-2018 IPR006949 Baseplate protein J-like CLSA_c21650 971765c1b45a99cc03645c79604ae14b 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 399 3.1E-64 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21650 971765c1b45a99cc03645c79604ae14b 466 Pfam PF01554 MatE 22 181 8.1E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21650 971765c1b45a99cc03645c79604ae14b 466 Pfam PF01554 MatE 244 398 5.6E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c21650 971765c1b45a99cc03645c79604ae14b 466 PIRSF PIRSF006603 3 454 1.6E-95 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLSA_c28930 1d6324c9a7ea637ee6b8e1ae9f738243 101 Pfam PF07875 Coat F domain 15 76 5.4E-23 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c12950 00233ef925fe5247dec27e8ad43c339c 55 Pfam PF13451 Probable zinc-ribbon domain 2 49 7.2E-27 T 12-10-2018 IPR025306 Probable zinc-binding domain CLSA_c24410 ca30178c403ec4ad08dc715ebc5ec503 306 Pfam PF08378 Nuclease-related domain 138 252 8.1E-16 T 12-10-2018 IPR011528 Nuclease-related domain, NERD CLSA_c24710 7647a7b41579badc1d739d5a5bd15eb6 235 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 146 216 5.8E-7 T 12-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF CLSA_c39530 dd20d0647f648c981263037623998f08 334 SUPERFAMILY SSF53756 2 330 2.57E-5 T 12-10-2018 CLSA_c35480 457d508dae7ad2dbc98392b70fbfdef6 146 Gene3D G3DSA:3.30.2220.30 21 134 1.4E-21 T 12-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily CLSA_c35480 457d508dae7ad2dbc98392b70fbfdef6 146 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 19 144 1.3E-34 T 12-10-2018 IPR014986 Clostridium phage phiCD119, XkdN CLSA_c17300 eaa88feaa7c8c73b2610c77c45183b4d 134 Pfam PF12788 YmaF family 26 122 1.1E-41 T 12-10-2018 IPR024307 YmaF CLSA_c08560 ba2feca41f6b76aa1dd6f7d5d2ed3fb2 173 Gene3D G3DSA:3.40.109.10 1 169 6.2E-46 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c08560 ba2feca41f6b76aa1dd6f7d5d2ed3fb2 173 Pfam PF00881 Nitroreductase family 8 154 3.7E-29 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLSA_c08560 ba2feca41f6b76aa1dd6f7d5d2ed3fb2 173 SUPERFAMILY SSF55469 1 166 4.45E-43 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLSA_c25050 175755de9362dda315a6550abfb8fcd9 159 SUPERFAMILY SSF52218 3 123 8.1E-21 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c25050 175755de9362dda315a6550abfb8fcd9 159 Pfam PF12682 Flavodoxin 5 132 2.8E-17 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLSA_c25050 175755de9362dda315a6550abfb8fcd9 159 Gene3D G3DSA:3.40.50.360 1 159 9.6E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily CLSA_c27790 e1b7dd39a3fd584e129a0f37ba9dff23 350 Pfam PF09992 Phosphodiester glycosidase 162 348 9.8E-42 T 12-10-2018 IPR018711 Phosphodiester glycosidase CLSA_c25530 e8ee0086a6d65dd68abd96a6e7135c6d 99 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 22 89 8.1E-9 T 12-10-2018 CLSA_c44180 2a194a2cf5c0c610ac6be8cd81819e15 413 Pfam PF01566 Natural resistance-associated macrophage protein 35 386 4.2E-94 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CLSA_c00260 950c973592c1316f2652a6c1e84f3042 268 Pfam PF06691 Protein of unknown function (DUF1189) 8 251 9.8E-49 T 12-10-2018 IPR009574 Protein of unknown function DUF1189 CLSA_c36850 fcf62b3800def27f7b3637f038ce5a70 97 Pfam PF07875 Coat F domain 16 78 4.0E-17 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c12040 a799f30a95eb61268121176c64ee248f 235 Pfam PF04172 LrgB-like family 15 227 3.0E-77 T 12-10-2018 IPR007300 CidB/LrgB family CLSA_c37350 e482b731fe9572534964f3ba3ffaecc2 72 Pfam PF10960 BhlA holin family 2 69 1.4E-29 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB CLSA_c37350 e482b731fe9572534964f3ba3ffaecc2 72 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 2 71 6.0E-12 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB CLSA_c17290 93c5b5a33613504f4b12e54200597dfc 192 SUPERFAMILY SSF56112 10 132 1.42E-9 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c18070 51a286af683f37d8da666f5b33e64b3e 424 PIRSF PIRSF006304 2 424 2.1E-155 T 12-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CLSA_c18070 51a286af683f37d8da666f5b33e64b3e 424 Pfam PF03611 PTS system sugar-specific permease component 8 393 9.7E-90 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CLSA_c35570 8e0509e7c8837fdda861e2583d6b656b 203 Pfam PF06810 Phage minor structural protein GP20 34 170 6.9E-32 T 12-10-2018 IPR009636 Capsid assembly scaffolding protein GO:0019069 CLSA_c35580 8f5a611094d54ebd8f5bb9874ec5bf3a 547 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 19 479 1.4E-56 T 12-10-2018 IPR021145 Portal protein CLSA_c27340 95d262bfed165f8b8562f006cf202ce0 170 Pfam PF04999 Cell division protein FtsL 54 136 9.1E-8 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CLSA_c25490 05653ff90715b1daf0706db9bc4b6fcf 111 Pfam PF01638 HxlR-like helix-turn-helix 20 105 4.1E-30 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type CLSA_c25490 05653ff90715b1daf0706db9bc4b6fcf 111 Gene3D G3DSA:1.10.10.10 2 111 3.7E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CLSA_c25490 05653ff90715b1daf0706db9bc4b6fcf 111 SUPERFAMILY SSF46785 6 110 6.69E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CLSA_c00130 0961e339da24a078590845ff4c938124 169 SUPERFAMILY SSF109604 23 168 1.96E-16 T 12-10-2018 CLSA_c00130 0961e339da24a078590845ff4c938124 169 Gene3D G3DSA:1.10.3210.10 31 169 4.0E-17 T 12-10-2018 CLSA_c00130 0961e339da24a078590845ff4c938124 169 Pfam PF01966 HD domain 46 168 1.9E-10 T 12-10-2018 IPR006674 HD domain CLSA_c00130 0961e339da24a078590845ff4c938124 169 TIGRFAM TIGR00277 HDIG: HDIG domain 45 150 2.2E-11 T 12-10-2018 IPR006675 HDIG domain CLSA_c43010 6f9e0cd71089ce3849d67a036b38db50 398 Pfam PF01098 Cell cycle protein 64 397 5.0E-84 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c33080 4c600d49bb173e4aec3553ed4291405b 117 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 5 117 1.6E-43 T 12-10-2018 IPR014204 Sporulation stage V, protein AE CLSA_c33080 4c600d49bb173e4aec3553ed4291405b 117 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 4 112 6.0E-38 T 12-10-2018 IPR005562 SpoVA CLSA_c39640 ac70b1e2ad317875add2467ecfb865ff 113 Pfam PF05400 Flagellar protein FliT 19 99 4.4E-9 T 12-10-2018 IPR008622 Flagellar protein FliT CLSA_c21410 baded6b405b49b4b112e5e2d10d408a8 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 303 6.3E-49 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CLSA_c45410 4da8d8cf4a8b766f4f26f5988fd35b47 171 Pfam PF14584 Protein of unknown function (DUF4446) 14 162 5.2E-55 T 12-10-2018 IPR027981 Protein of unknown function DUF4446 CLSA_c06590 8813cfa8801171f2eeab57e3671a4044 198 Pfam PF02342 TerD domain 1 197 7.1E-73 T 12-10-2018 IPR003325 TerD domain CLSA_c06590 8813cfa8801171f2eeab57e3671a4044 198 Gene3D G3DSA:2.60.60.30 19 195 1.0E-58 T 12-10-2018 CLSA_c30330 ccd0188dc6463d228e392218e7969c92 333 Pfam PF14057 GGGtGRT protein 4 329 2.8E-197 T 12-10-2018 IPR025964 GGGtGRT protein CLSA_c43060 be6bfe2b14e9dc4aa3c71d93640c1d32 434 SUPERFAMILY SSF50156 315 371 4.22E-5 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 CLSA_c39090 bff03090a185cba2a19e72ec619c9998 317 Pfam PF13170 Protein of unknown function (DUF4003) 15 309 6.0E-92 T 12-10-2018 IPR025062 Protein of unknown function DUF4003 CLSA_c00960 6b1e808e5eea5f9cf70676dfd8535f18 661 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 78 235 1.6E-31 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CLSA_c36520 91e7d3cb121714193f9d4395691b77a3 27 Pfam PF14414 A nuclease of the HNH/ENDO VII superfamily with conserved WHH 1 24 4.1E-8 T 12-10-2018 IPR032869 WHH domain-containing protein CLSA_c17430 9369963201f02ec28d08600682c5d218 333 Pfam PF03773 Predicted permease 37 328 3.2E-56 T 12-10-2018 IPR005524 Predicted permease DUF318 CLSA_c02770 67f2b48df5bc0fb8129b253325c2a9fb 38 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 2 15 9.2E-4 T 12-10-2018 IPR010133 Bacteriocin-type signal sequence CLSA_c39270 e4b198c187ee56ca05fa55402e4c6d09 75 Pfam PF06289 Flagellar protein (FlbD) 13 71 2.6E-26 T 12-10-2018 IPR009384 Swarming motility protein SwrD-like CLSA_c19240 9c11e741e929f1f0045954be2422e4fa 366 SUPERFAMILY SSF53098 70 358 7.59E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily CLSA_c05170 270a6e7b7c1e6d6f69e46683c78b0bf5 232 SUPERFAMILY SSF143842 132 229 3.14E-6 T 12-10-2018 IPR036209 YwmB-like superfamily CLSA_c28420 3e1033ed1e5d992129779df2fa224776 170 Pfam PF13471 Transglutaminase-like superfamily 62 165 1.9E-15 T 12-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal CLSA_c29060 5c5772300c26cd09b1b401df67bd1682 354 SUPERFAMILY SSF52980 36 135 6.43E-5 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLSA_c42440 cf16b917c37f641167d8387cd5631302 363 Pfam PF01757 Acyltransferase family 13 335 5.2E-17 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CLSA_c27760 6f5fb5ef821fdb05101f4afb9a6903b4 150 Pfam PF12638 Staygreen protein 3 146 7.0E-48 T 12-10-2018 IPR024438 Staygreen protein CLSA_c16650 709b62443f8599334a52bd1dcb8cb006 197 Pfam PF02687 FtsX-like permease family 97 191 6.5E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c36650 f63d5bc85fa1cbe7e59fc5654b670627 120 Pfam PF14107 Domain of unknown function (DUF4280) 6 118 7.6E-29 T 12-10-2018 IPR025460 Protein of unknown function DUF4280 CLSA_c37080 06dc6c9df0ad353b6b93264da08142cf 86 Gene3D G3DSA:1.10.1200.10 1 86 1.3E-6 T 12-10-2018 IPR036736 ACP-like superfamily CLSA_c16470 9c30269bb914adf3357b890bb495561a 125 Pfam PF04343 Protein of unknown function, DUF488 5 116 1.5E-21 T 12-10-2018 IPR007438 Protein of unknown function DUF488 CLSA_c15580 bf00b554ffbc41c41694a55069528181 265 Pfam PF06691 Protein of unknown function (DUF1189) 9 250 1.1E-61 T 12-10-2018 IPR009574 Protein of unknown function DUF1189 CLSA_c28960 07dc474f4539345ed682acbd546f2933 120 Pfam PF07875 Coat F domain 19 79 6.3E-21 T 12-10-2018 IPR012851 Spore coat protein CotF-like CLSA_c22960 1ebfd44403caafcef46e143675e87730 704 Gene3D G3DSA:2.60.120.260 329 452 7.1E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily CLSA_c31860 1a14c2c3cc1b3d1bd5beea3f0496393c 88 PIRSF PIRSF002599 2 88 2.3E-9 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 CLSA_c31860 1a14c2c3cc1b3d1bd5beea3f0496393c 88 Pfam PF06961 Protein of unknown function (DUF1294) 13 67 2.9E-26 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 CLSA_c22180 36a3a9789ee847edd92d498c4207750c 182 Gene3D G3DSA:1.20.120.520 2 179 3.5E-25 T 12-10-2018 CLSA_c22180 36a3a9789ee847edd92d498c4207750c 182 Pfam PF01814 Hemerythrin HHE cation binding domain 3 139 8.4E-16 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CLSA_c25810 e2c09d72f3ae13224787b548334cdb64 128 Gene3D G3DSA:3.90.79.10 7 127 7.9E-7 T 12-10-2018 CLSA_c25640 78507091d4e4980ba03903760382660b 267 Pfam PF13349 Putative adhesin 53 234 4.2E-9 T 12-10-2018 IPR025164 Putative adhesin CLSA_c09510 71367c0305d2706ff8f0e68c6f989a1f 519 Pfam PF03235 Protein of unknown function DUF262 28 235 1.2E-15 T 12-10-2018 IPR004919 Domain of unknown function DUF262 CLSA_c09790 db28f0b8bcd4abb0ff993bf3a7a5c789 47 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 1 15 5.1E-4 T 12-10-2018 IPR010133 Bacteriocin-type signal sequence CLSA_c00050 39aba4a56a86633be9ec4529a2f567a6 86 Pfam PF04025 Domain of unknown function (DUF370) 2 79 1.5E-8 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A CLSA_c28610 eb292f4931a89452ad650e451f536719 219 Pfam PF02397 Bacterial sugar transferase 26 213 1.5E-69 T 12-10-2018 IPR003362 Bacterial sugar transferase CLSA_c41250 3f886677dadbe5a6447c917e22129228 201 Pfam PF02397 Bacterial sugar transferase 9 200 5.7E-64 T 12-10-2018 IPR003362 Bacterial sugar transferase CLSA_c43530 0f3c8f5702198b466308332cf2c33b3c 495 ProDom PD141294 TRANSMEMBRANE MEMBRANE PROTEIN GTRIV-SF YFDI PREDICTED 157 471 4.0E-15 T 12-10-2018 CLSA_c01640 04601c539ddbf78a4b23f0fa96e0f521 301 Pfam PF04468 PSP1 C-terminal conserved region 61 146 5.8E-34 T 12-10-2018 IPR007557 PSP1, C-terminal CLSA_c24920 e883bd9be2b5014fb0e932879189dc79 233 Pfam PF07007 Lysozyme inhibitor LprI 146 224 4.2E-11 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CLSA_c03270 80f7aa14f31b8965c89a5bdd6513474e 148 SMART SM00507 3 53 4.6E-5 T 12-10-2018 IPR003615 HNH nuclease CLSA_c44800 2bd740776819cd089e95d572b4767ea1 254 Pfam PF01925 Sulfite exporter TauE/SafE 14 246 1.4E-43 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CLSA_c21780 5f9e4653c64c95eb167e0b01d94e8561 67 Pfam PF13783 Domain of unknown function (DUF4177) 3 51 9.5E-8 T 12-10-2018 IPR025234 Protein of unknown function DUF4177 CLSA_c28250 023c8ce1fe1c8a8a35ec6626662c2ab5 51 Pfam PF13451 Probable zinc-ribbon domain 2 48 2.6E-27 T 12-10-2018 IPR025306 Probable zinc-binding domain CLSA_c20870 3fba81f6db5fc414efdc4ccbd454aba9 260 Pfam PF12730 ABC-2 family transporter protein 4 191 4.8E-10 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c30540 416befbe6b1324ac59b991da5e00ed2b 195 SUPERFAMILY SSF54060 133 192 8.36E-5 T 12-10-2018 CLSA_c38120 eb318dbdeeac2ba349d4fdf977af500a 228 Pfam PF06161 Protein of unknown function (DUF975) 3 115 4.0E-8 T 12-10-2018 IPR010380 Protein of unknown function DUF975 CLSA_c38120 eb318dbdeeac2ba349d4fdf977af500a 228 Pfam PF06161 Protein of unknown function (DUF975) 109 222 8.0E-20 T 12-10-2018 IPR010380 Protein of unknown function DUF975 CLSA_c27070 dcb18ff94081558f3a9fbe9a204e5636 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 3.4E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site CLSA_c00600 3fa7fe20c21bcb2acbcb24040bae810d 59 Pfam PF09858 Predicted membrane protein (DUF2085) 1 36 1.9E-8 T 12-10-2018 IPR019206 Protein of unknown function DUF2085, transmembrane CLSA_c20130 15935763c3bf04605d8b15c711194d74 830 Pfam PF02687 FtsX-like permease family 731 813 2.0E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c20130 15935763c3bf04605d8b15c711194d74 830 Pfam PF02687 FtsX-like permease family 304 389 2.5E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c10020 47366a58985411983af3c5f168441c34 530 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 144 291 2.4E-10 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like CLSA_c35110 a31c7d78070aac45e50180f9802481a7 72 Pfam PF11148 Protein of unknown function (DUF2922) 5 69 1.8E-24 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 CLSA_c15180 4b6afc6d9ca931599f9fd183622a4654 198 Pfam PF06725 3D domain 130 196 1.1E-6 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CLSA_c16500 3b982d79fe0b3a9f85ebfe776efe2459 57 Gene3D G3DSA:3.10.180.10 1 57 1.0E-17 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLSA_c35710 dba7c1e01218ca80eaa40abe4daf32cd 59 Pfam PF07561 Domain of Unknown Function (DUF1540) 3 47 3.0E-5 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 CLSA_c30000 0a372552d737717dcb266cb4288bf9dc 148 Gene3D G3DSA:1.10.10.60 1 72 5.7E-5 T 12-10-2018 CLSA_c12200 a7ef57f5498560708503491dca3ecb43 569 SUPERFAMILY SSF102829 3 75 9.55E-15 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily CLSA_c12200 a7ef57f5498560708503491dca3ecb43 569 Pfam PF05164 Cell division protein ZapA 4 90 4.0E-16 T 12-10-2018 IPR007838 Cell division protein ZapA-like CLSA_c40390 db119a33b405996d7f1b37dd6719f314 199 SUPERFAMILY SSF56112 21 150 2.05E-7 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily CLSA_c22810 6588350900ba9352626f9e714f0bb4bd 210 Gene3D G3DSA:2.60.40.1240 44 192 3.0E-14 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily CLSA_c33420 f10c765970859b1da01011ea8ff17233 51 Pfam PF01098 Cell cycle protein 1 40 1.2E-8 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLSA_c20100 e71412309f033bd56023f76eabab1fbe 830 Pfam PF02687 FtsX-like permease family 304 387 2.0E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CLSA_c39300 c793ca60666c5eac34f8e41d4fdd6b24 311 Pfam PF03963 Flagellar hook capping protein - N-terminal region 33 104 8.0E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein CLSA_c40580 51dc3e03aa8db1922d479775f318c131 186 Pfam PF15589 Immunity protein 21 10 164 5.5E-13 T 12-10-2018 IPR028961 Immunity protein 21 CLSA_c19740 12ef20f97d291a9573be76162f49fa82 226 Pfam PF13349 Putative adhesin 125 223 8.2E-9 T 12-10-2018 IPR025164 Putative adhesin CLSA_c09150 539948615f5078167dd740075adb4fe7 377 Pfam PF10926 Protein of unknown function (DUF2800) 4 359 2.5E-149 T 12-10-2018 IPR021229 Protein of unknown function DUF2800 CLSA_c25420 0e904554465447352cb44cd0dfce1740 315 Pfam PF01061 ABC-2 type transporter 126 276 4.2E-16 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLSA_c06280 7a95c262756bde98c4ee8b185e1d0fdf 254 Pfam PF12730 ABC-2 family transporter protein 4 181 1.4E-40 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 CLSA_c34600 58a72a35d41dc7e506d7efc11a3c0f3d 152 Gene3D G3DSA:3.20.80.10 2 152 1.5E-14 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily CLSA_c30680 dffaabaac495d14f922b89da4ce1cd62 81 Pfam PF06949 Protein of unknown function (DUF1292) 12 80 1.4E-11 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 CLSA_c42310 9da08a369b0ab3805a39b5860dbc0816 414 Pfam PF13425 O-antigen ligase like membrane protein 3 252 4.2E-21 T 12-10-2018 CLSA_c42310 9da08a369b0ab3805a39b5860dbc0816 414 Pfam PF13425 O-antigen ligase like membrane protein 260 403 7.2E-13 T 12-10-2018